BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004632
         (741 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score = 1009 bits (2608), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/741 (66%), Positives = 606/741 (81%), Gaps = 1/741 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MPLFRSCT+LR LT LH+HLLVTGLH+DP AST+LIESY+++G L+SS+LVF+TF+ PDS
Sbjct: 5   MPLFRSCTSLRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDS 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           FMWAVLIKC++W+NF  E+I LY+KMI +Q  IS+FI+ SVLRAC+  G+L  GE+VHGR
Sbjct: 65  FMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGR 124

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK G D D V++TS+L  YG+ GCL +A+KVFD MT+RD+VSWSSII+ Y DN + SEG
Sbjct: 125 IIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEG 184

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L+MF  +V + VE D VTMLS+A ACGEL  LR A+S+HG ++R++I+  GPL ++ ++M
Sbjct: 185 LEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLM 244

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YS+C D  SAER F  +  R   SWTAMISCYNRS WF++AL+ FV+MLE K  PN +T+
Sbjct: 245 YSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTI 304

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + VL SCAG   LREGKSVHC  + K +  + D LGPALIE+YA+ GK+S CEKV+H IG
Sbjct: 305 MAVLSSCAGFNLLREGKSVHCYAV-KHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIG 363

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +RNI+SWNMLIS YA +G+ KEAL + VQMQ  G +PDSFS++SS+SAC NVG L LG Q
Sbjct: 364 KRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQ 423

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           IHG+ IK    DEFVQ+SLIDMYSKCG  +LAYL+F+RIQ KSVV WNSMICGF Q GNS
Sbjct: 424 IHGYAIKRHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNS 483

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           LEAI LF QMYLNCL+M+EVTFLTAIQACS++G LEKGKW+HHKLI+YGV+KD++IDTAL
Sbjct: 484 LEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTAL 543

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMYAKCGDL+ A RVFDSMSER+VVSWSAMI   GMHG ++ A SLF +M+   +KPN+
Sbjct: 544 IDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPND 603

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           +TFMNIL ACSHSG VEEGKFYFN+M+ F VEP+L+H+ACMVDLLSR+GD++ A+++I+S
Sbjct: 604 ITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINS 663

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MPFPA  SIWGALLNGCRIH+R+D+++ IE++L    T+D GYYTLLSNIYAEEGNWD  
Sbjct: 664 MPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVS 723

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
            KVRS M+  GLKKVPGYSTI
Sbjct: 724 RKVRSAMKGIGLKKVPGYSTI 744


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  997 bits (2578), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/742 (64%), Positives = 582/742 (78%), Gaps = 1/742 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MPLFR C     LT+LHAHL +TGLH  PPAST+LIESYA++G   SS+ VFDTF +PDS
Sbjct: 5   MPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDS 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           FMW VLIKCY+W  FFEE++ LYH+M+ ++Q  ISNF++PSVL+ACS  GDL  G KVHG
Sbjct: 65  FMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHG 124

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+IKCGF+ D V++TS+LC YGE  CLDDA K FD M  RDVV+WSSI+ ++  N   SE
Sbjct: 125 RVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASE 184

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           GL MF  M+ E VEPD VTMLS+ EAC EL SLR  RS+HG+V+RR+I+ +  L NS IV
Sbjct: 185 GLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIV 244

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY K GDL SAER F  +  R T  WT MISCYN+SG FQ+AL  F KM E K EPN +T
Sbjct: 245 MYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVT 304

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++ VL +CA LG ++EG+SVH  +IR+ M PE D+LGPAL+E YA+ G + +C KV   I
Sbjct: 305 MVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETI 364

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+ ILSWN LIS + R G  +EAL L VQMQT GLMPDS+S+ASSLSACG +   QLG 
Sbjct: 365 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGA 424

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           QIHG++IK    ++FVQ++LIDMY+KCGF + A  +FE+I++KS+V WNSMICGF QNG 
Sbjct: 425 QIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGY 484

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
           S+EAI LF QMY+NC++MD++TFL+ IQACS++G LEKGKWVHHKLI YG+RKD Y+DTA
Sbjct: 485 SVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTA 544

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           LTDMY+KCG+LQ A  VFD MSER++VSWS MI  YGMHGQ+N   SLF QML SGIKPN
Sbjct: 545 LTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPN 604

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           ++TFM+IL ACSH+G+VEEGK YFN+M  FGVEP   H+ACMVDLLSR+GD+ GA+++I 
Sbjct: 605 DITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIIT 664

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
           S+PFPAN SIWGALLNGCRIHKRID++K+IEK L    T D GYYTLLSNIYAEEG WD+
Sbjct: 665 SLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDK 724

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
           FGKVRS+M+  GL+KVPGYSTI
Sbjct: 725 FGKVRSMMKSKGLRKVPGYSTI 746


>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
 gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  963 bits (2490), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/741 (62%), Positives = 583/741 (78%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MPLFRSC  LR+L +LHAHL VT L     AST+LIESYA+MGS++SS LVF+T++ PDS
Sbjct: 5   MPLFRSCKTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDS 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           FMW VLIKC++W++ FEE+ILLY KM+  +A I++F++PSVLRAC+  GD+  G KVHGR
Sbjct: 65  FMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGR 124

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIKCGFD D  I+TS+L  YGE GCL DARKVFD +  RD+VSWSSII+SY D  + +E 
Sbjct: 125 IIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEA 184

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L+MF  +V E V+ D+V MLS+ EAC +L  L+ A+SIHG+++RR++     L NS I M
Sbjct: 185 LEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEM 244

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YS C DL SAER FV +  +   SWT+MI CYNRSGWF++A E FVKMLE+K EPN+IT+
Sbjct: 245 YSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITI 304

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + VL SC+GL WLREGK +HC  ++KGM  + D LGP LIE YA CGK+  CEKV+ AIG
Sbjct: 305 MGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIG 364

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           ERN++SWN L+S  AR+G+ +EAL L VQMQ  GLM D FS++S++SACGNVGSLQLG Q
Sbjct: 365 ERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQ 424

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           IHG+ IK     EFV+++LI MYS+CGF + AY++F  I+QKS V WNS+I GF Q+GNS
Sbjct: 425 IHGYAIKRCILGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNS 484

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           +EAI+L  QMYLNCL++ +V FL+AIQAC+++  LEKGKW+HHKLI YGV KD+YI+TAL
Sbjct: 485 IEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETAL 544

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
           TDMYAKCGDL+TA+ VF SMSE++VVSWSAMI  YGMHG+++ A + F QM++ GIKPN 
Sbjct: 545 TDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNH 604

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           +TFMNIL ACSHSGSVE+GKFYF+ MR FGVEP  +H+AC+VDLLSR+GD+ GA+K+I+S
Sbjct: 605 ITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHFACLVDLLSRAGDVNGAYKIINS 664

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MPFPA+ S+ G LLNGCRIH+R+D++  IEK+L    T+D G+Y+LLSNIYAE GNW   
Sbjct: 665 MPFPADASVLGNLLNGCRIHQRMDMIPEIEKDLLKIRTSDTGHYSLLSNIYAEIGNWAAR 724

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
              R IME +G KKVPGYS I
Sbjct: 725 ENTRGIMERSGYKKVPGYSAI 745


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  922 bits (2384), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/743 (58%), Positives = 565/743 (76%), Gaps = 3/743 (0%)

Query: 1    MPLFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
            MPLFRSC++LR +++LHAHLLVTG L  DP   T+LIESYA MGS  SSRLVF+ F  PD
Sbjct: 563  MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD 622

Query: 60   SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLGSGEKVH 118
            SFM+ VLIKC +W +  + +I LYH+++ E+  IS F++PSVLRAC+ S   L  G KVH
Sbjct: 623  SFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVH 682

Query: 119  GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            GRIIK G D D VI+TS+LC YG+ G L DA KVFD M  RD+V+WS++++S  +N +V 
Sbjct: 683  GRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVL 742

Query: 179  EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            + L+MF  MV +GVEPD VTM+S+ E C EL  LR ARS+HG + R+    D  L NS +
Sbjct: 743  KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLL 802

Query: 239  VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             MYSKCGDLLS+E+ F KI K+   SWTAMIS YNR  + +KAL SF +ML+   EPNL+
Sbjct: 803  TMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLV 862

Query: 299  TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            TL ++L SC   G +REGKSVH   IR+ + P Y+ L PAL+E YAECG++ +CE ++H 
Sbjct: 863  TLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHV 922

Query: 359  IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
            +G+RNI+ WN  IS YA +GM  EAL L  QM TW + PDSF++AS +SAC N G ++LG
Sbjct: 923  VGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLG 982

Query: 419  LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
             QIHGHVI+ D  DEFVQ+S+IDMYSK GF NLA  +F++I+ +S+V WNSM+CGF QNG
Sbjct: 983  KQIHGHVIRTDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNG 1042

Query: 479  NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            NSLEAINLF  MY +CLE+++VTFL  IQACS+IG LEKG+WVHHKLI  G+ KD++ DT
Sbjct: 1043 NSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGI-KDLFTDT 1101

Query: 539  ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
            AL DMYAKCGDL TA+ VF +MS R++VSWS+MI+ YGMHG++  A S F QM++SG KP
Sbjct: 1102 ALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 1161

Query: 599  NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            NEV FMN+L AC HSGSVEEGK+YFN M++FGV P+ +H+AC +DLLSRSGD++ A++ I
Sbjct: 1162 NEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 1221

Query: 659  HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
              MPF A+ S+WG+L+NGCRIH+++D++K I+ ++S   T+D GYYTLLSNIYAEEG W+
Sbjct: 1222 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWE 1281

Query: 719  EFGKVRSIMEVTGLKKVPGYSTI 741
            EF ++RS M+   LKKVPGYS I
Sbjct: 1282 EFRRMRSAMKSLNLKKVPGYSAI 1304


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  909 bits (2349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/745 (59%), Positives = 571/745 (76%), Gaps = 5/745 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MPLFRSC+ LR L++LHAHL+VTGLH DP AST+L+ESYA MGSL SSRLVF+T   PDS
Sbjct: 5   MPLFRSCSTLRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDS 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN---FIYPSVLRACSSLGDLGSGEKV 117
           FM+ VLIKCY+W++ F++ + LYH  I++ + ++    F+YPSV++A S +G L  G KV
Sbjct: 65  FMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKV 124

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HGRI+K G   D VI TS+L  YGE GCL DARKVFD++  RD+VSWSS++A Y +N   
Sbjct: 125 HGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRP 184

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            EGL+M   MV EGV PD VTMLS+AEACG++  LR A+S+HG+V+R+++  D  L NS 
Sbjct: 185 REGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSL 244

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           IVMY +C  L  A+  F  +    T  WT+MIS  N++G F++A+++F KM E + E N 
Sbjct: 245 IVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNA 304

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGM-GPEYDYLGPALIEFYAECGKMSECEKVI 356
           +T+I+VL  CA LGWL+EGKSVHC I+R+ M G + D LGPAL++FYA C K+S CEK++
Sbjct: 305 VTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLD-LGPALMDFYAACWKISSCEKLL 363

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             IG  +++SWN LIS YAR+G+++EA+ L V M   GLMPDSFS+ASS+SAC    S++
Sbjct: 364 CLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVR 423

Query: 417 LGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G QIHGHV K    DEFVQ+SL+DMYSKCGF +LAY +F++I +KS+V WN MICGF Q
Sbjct: 424 FGQQIHGHVTKRGFADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQ 483

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG S+EA+ LF +M  NC++++EVTFL+AIQACSN G L KGKW+HHKL+  GV+KD+YI
Sbjct: 484 NGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYI 543

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
           DTAL DMYAKCGDL+TAQ VF+SM E++VVSWSAMI  YG+HGQ+  A +LF +M++S I
Sbjct: 544 DTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHI 603

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           KPNEVTFMNIL AC H+GSVEEGKFYFN+MR +G+ P+ +H+A +VDLLSR+GDI+GA++
Sbjct: 604 KPNEVTFMNILSACRHAGSVEEGKFYFNSMRDYGIVPNAEHFASIVDLLSRAGDIDGAYE 663

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           +I S     + SIWGALLNGCRIH R+D++  I KEL    TND GYYTLLSNIYAE GN
Sbjct: 664 IIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGN 723

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
           W E  KVRS ME  GLKKVPGYS+I
Sbjct: 724 WYESRKVRSRMEGMGLKKVPGYSSI 748


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/743 (58%), Positives = 560/743 (75%), Gaps = 3/743 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           MPLFRSC++LR +++LHAHLLVTG L  DP   T+LIESYA MGS  SSRLVF+ F  PD
Sbjct: 5   MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD 64

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLGSGEKVH 118
           SFM+ VLIKC +W +  + +I LYH+++ E   IS F++PSVLRAC+ S   L  G KVH
Sbjct: 65  SFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVH 124

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           GRIIK G D D VI+TS+LC YG+ G L DA KVFD M  RD+V+WS++++S  +N +V 
Sbjct: 125 GRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVV 184

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L+MF  MV +GVEPD VTM+S+ E C EL  LR ARS+HG + R+   +D  L NS +
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKCGDLLS+ER F KI K+   SWTAMIS YNR  + +KAL SF +M++   EPNL+
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLV 304

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL +VL SC  +G +REGKSVH   +R+ + P Y+ L  AL+E YAECGK+S+CE V+  
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + +RNI++WN LIS YA +GM  +AL L  QM T  + PD+F++ASS+SAC N G + LG
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            QIHGHVI+ D  DEFVQ+SLIDMYSK G  + A  +F +I+ +SVV WNSM+CGF QNG
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNG 484

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           NS+EAI+LF  MY + LEM+EVTFL  IQACS+IG LEKGKWVHHKLI  G+ KD++ DT
Sbjct: 485 NSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDT 543

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMYAKCGDL  A+ VF +MS R++VSWS+MI+ YGMHG++  A S F QM++SG KP
Sbjct: 544 ALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 603

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           NEV FMN+L AC HSGSVEEGK+YFN M+ FGV P+ +H+AC +DLLSRSGD++ A++ I
Sbjct: 604 NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
             MPF A+ S+WG+L+NGCRIH+++D++K I+ +LS   T+D GYYTLLSNIYAEEG W+
Sbjct: 664 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWE 723

Query: 719 EFGKVRSIMEVTGLKKVPGYSTI 741
           EF ++RS M+ + LKKVPGYS I
Sbjct: 724 EFRRLRSAMKSSNLKKVPGYSAI 746


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/745 (58%), Positives = 576/745 (77%), Gaps = 4/745 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MPLFR+C+ LR+LT+LHAHL+VT LH +P AST+L+ESY++MGSL+SSRLVF T   PDS
Sbjct: 5   MPLFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDS 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN---FIYPSVLRACSSLGDLGSGEKV 117
           FM++VLIKC++WN+ F E + L++  I+  + ++    F+YPSV+RA + +G+L  G K+
Sbjct: 65  FMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKL 124

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HGRI+K GF +D VI TS++  YGE   L DA+KVFD+M  RD+V WSSII+ Y +N   
Sbjct: 125 HGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVY 184

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            EGL+MF SM+ EG+ PD V +LS+AEACG++  LR A+S+HG+V+R  +  DG L NS 
Sbjct: 185 REGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSL 244

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           IVMYS+CG L  A+R F  I+ R T+ WT+MIS YN++  F++AL+ F+KM + + EPN 
Sbjct: 245 IVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPND 304

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T+I+VL SCA LG L+EGKSVHC ++R  MG     LGPALI+FY+ C KMS CEK++H
Sbjct: 305 VTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLH 364

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +IG  NI+SWN LIS YAR+G++ EA+     M   G+MPDSFS+ASS+SA  + GS+Q 
Sbjct: 365 SIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQF 424

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           G QIHGHV+K    DEFVQ+SL+DMYSKCGF + AY +F +I+ KS+V WN MICGF QN
Sbjct: 425 GQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQN 484

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G S+EA++LF +M+ N LE+++VTFL+AIQACSN+G L+KGKW+HHK+I  G + D+YID
Sbjct: 485 GISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYID 544

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           TAL DMYAKCGDLQTAQ+VFDS+ E++VVSWS MI  +G+HGQ+N A SLF +M+ S IK
Sbjct: 545 TALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIK 604

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PNEVTFMNIL AC H+GSV+EGKFYFN MR  +G+ P+++H+A +VDLLSR+GDI GA++
Sbjct: 605 PNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYE 664

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           +I S+  P   SIWGALLNGCRI+ R+D+++ I +EL    T+D GYYTLLSNIYAE GN
Sbjct: 665 IIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGN 724

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
           W E  KVRS ME  GLKKVPGYST+
Sbjct: 725 WYESRKVRSKMEGMGLKKVPGYSTV 749


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/741 (58%), Positives = 561/741 (75%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MPLF++ T LR+L +LHAH++VT LH DP  ST+LIESY+++G L+SS  VF TF  PDS
Sbjct: 5   MPLFKASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDS 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           FMW VL+K ++WN  ++E+I LYH+M+ +Q   +++ +PSVLRACS  GDLG G++VHGR
Sbjct: 65  FMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGR 124

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK GFD D V+ T++L  YGE G LD ARKVF +M  RD+VSWSSII+S  +N +++EG
Sbjct: 125 IIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEG 184

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  F  MV EG  PD V +L++ EACGEL  LR A+S HG++L+R I+ D  + +S I M
Sbjct: 185 LDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFM 244

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L SAE  F  +  R T++WTAMIS YN  G+ ++AL  FV M + + EPN +T+
Sbjct: 245 YAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTM 304

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +L SC  L  LREGKSVHC +I+  +    D LGP L+E YA   K   CEK++H IG
Sbjct: 305 RIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIG 364

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R I  WN LIS YA+KG+ KE ++L V+MQ  G MPDSFS+ASSLSA GN G LQLGLQ
Sbjct: 365 GRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQ 424

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           IHGHVIK    DE+V +SLI+MYSKCG+ +LAY++F++++ K VV WNSMI G  QNG S
Sbjct: 425 IHGHVIKRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYS 484

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +AI+LF  MY+ C E+ EV F++ IQACS++G LEKGKW+HHKLI+ GVRK I+I+TAL
Sbjct: 485 TKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETAL 544

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMYAKCGDLQTAQRVFD+MSER+VVSWS++I  YG+HGQ+++   LF +ML+SGIKPN+
Sbjct: 545 VDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPND 604

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           VT MN+L ACSH+G V+EG  +FN+MR FG+EP  +H+ C+VDLLSR+GD++ A+++I  
Sbjct: 605 VTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKL 664

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MPFP   SIWGALLNGCRIH+R+D+ K I++EL    T+D G+YTLLSNIYA  G W+EF
Sbjct: 665 MPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEF 724

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
           G+VRS+M+ TGLKKVP YS +
Sbjct: 725 GEVRSMMKGTGLKKVPAYSVV 745


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/741 (58%), Positives = 560/741 (75%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MPLF++ T LR L +LHAH++VT LH DP  ST+LIESY+++G L+SS  VF TF  PDS
Sbjct: 5   MPLFKASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDS 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           FMW VL+K ++WN  ++E+I LYH+M+ +Q   +++ +PSVLRACS  GDLG G++VHGR
Sbjct: 65  FMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGR 124

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK GFD D V+ T++L  YGE G LD ARKVF +M  RD+VSWSSII+S  +N +++EG
Sbjct: 125 IIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEG 184

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  F  MV EG  PD V +L++ EACGEL  LR A+S HG++L+R I+ D  + +S I M
Sbjct: 185 LDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFM 244

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L SAE  F  +  R T++WTAMIS YN  G+ ++AL  FV M + + EPN +T+
Sbjct: 245 YAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTM 304

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +L SC  L  LREGKSVHC +I+  +    D LGP L+E YA   K   CEK++H IG
Sbjct: 305 RIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIG 364

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R I  WN LIS YA+KG+ KE ++L V+MQ  G MPDSFS+ASSLSA GN G LQLGLQ
Sbjct: 365 GRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQ 424

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           IHGHVIK    DE+V +SLI+MYSKCG+ +LAY++F++++ K VV WNSMI G  QNG S
Sbjct: 425 IHGHVIKRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYS 484

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +AI+LF  MY+ C E+ EV F++ IQACS++G LEKGKW+HHKLI+ GVRK I+I+TAL
Sbjct: 485 TKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETAL 544

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMYAKCGDLQTAQRVFD+MSER+VVSWS++I  YG+HGQ+++   LF +ML+SGIKPN+
Sbjct: 545 VDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPND 604

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           VT MN+L ACSH+G V+EG  +FN+MR FG+EP  +H+ C+VDLLSR+GD++ A+++I  
Sbjct: 605 VTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKL 664

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MPFP   SIWGALLNGCRIH+R+D+ K I++EL    T+D G+YTLLSNIYA  G W+EF
Sbjct: 665 MPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEF 724

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
           G+VRS+M+ TGLKKVP YS +
Sbjct: 725 GEVRSMMKGTGLKKVPAYSVV 745


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 315/577 (54%), Positives = 400/577 (69%), Gaps = 53/577 (9%)

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H H+    +    P     I  Y++ G   S++R F    K  +  W  +I CY   G+
Sbjct: 367 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 426

Query: 278 FQKA---------------------------------------------LESFVKMLEVK 292
           F++A                                             L+ F +M+   
Sbjct: 427 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEA 486

Query: 293 EEPNLITLITVLGSCAGLGWLR--------EGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
            EP+ +T+++V  +C+ LG LR        EG+SVH  +IR+ M PE D+LGPAL+E YA
Sbjct: 487 VEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 546

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           + G + +C KV   I E+ ILSWN LIS + R G  +EAL L VQMQT GLMPDS+S+AS
Sbjct: 547 DTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 606

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           SLSACG +   QLG QIHG++IK    ++FVQ++LIDMY+KCGF + A  +FE+I++KS+
Sbjct: 607 SLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSL 666

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V WNSMICGF QNG S+EAI LF QMY+NC++MD++TFL+ IQACS++G LEKGKWVHHK
Sbjct: 667 VTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHK 726

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
           LI YG+RKD Y+DTALTDMY+KCG+LQ A  VFD MSER++VSWS MI  YGMHGQ+N  
Sbjct: 727 LIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINAT 786

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDL 644
            SLF QML SGIKPN++TFM+IL ACSH+G+VEEGK YFN+M  FGVEP   H+ACMVDL
Sbjct: 787 ISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDL 846

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
           LSR+GD+ GA+++I S+PFPAN SIWGALLNGCRIHKRID++K+IEK L    T D GYY
Sbjct: 847 LSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYY 906

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           TLLSNIYAEEG WD+FGKVRS+M+  GL+KVPGYSTI
Sbjct: 907 TLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTI 943



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 188/596 (31%), Positives = 310/596 (52%), Gaps = 83/596 (13%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           + C     LT+LHAHL +TGLH  PPAST+LIESYA++G   SS+ VFDTF +PDSFMW 
Sbjct: 356 KRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWG 415

Query: 65  VLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEK------- 116
           VLIKCY+W  FFEE++ LYH+M+ ++Q  ISNF++PSVL+ACS  GDL  G K       
Sbjct: 416 VLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEG 475

Query: 117 ---------------------------------------------VHGRIIKCGFDKD-D 130
                                                        VHG +I+   D + D
Sbjct: 476 LDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELD 535

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            +  +++  Y + G L D  KVF+ +  + ++SW+++I+ +  N    E L +F  M  +
Sbjct: 536 FLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQ 595

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G+ PD  ++ S   ACG +   +    IHG++++     +  + N+ I MY+KCG + SA
Sbjct: 596 GLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSA 654

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
            + F KI+++   +W +MI  ++++G+  +A+  F +M     + + +T ++V+ +C+ L
Sbjct: 655 NKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHL 714

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G+L +GK VH ++I  G+  +  YL  AL + Y++CG++     V   + ER+I+SW+++
Sbjct: 715 GYLEKGKWVHHKLIMYGLRKD-SYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVM 773

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           I+ Y   G     + L  QM   G+ P+  +    LSAC + G+++ G      + +   
Sbjct: 774 IAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGV 833

Query: 431 K---DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL-EAINL 486
           +   D F  + ++D+ S+ G  N AY +   +   +    NS I G   NG  + + I++
Sbjct: 834 EPKHDHF--ACMVDLLSRAGDLNGAYQIITSLPFPA----NSSIWGALLNGCRIHKRIDI 887

Query: 487 FHQMYLNCLEMDEV-----TFLTAIQACSNIGQLEKGKW-----VHHKLISYGVRK 532
              +  N L++D       T L+ I A       E+G W     V   + S G+RK
Sbjct: 888 IKSIEKNLLDVDTADTGYYTLLSNIYA-------EEGTWDKFGKVRSMMKSKGLRK 936



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 56/297 (18%)

Query: 420 QIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H H+      +     + LI+ Y++ G    +  +F+   +    MW  +I  +   G
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425

Query: 479 NSLEAINLFH---------------------------------------------QMYLN 493
              EA++L+H                                             QM   
Sbjct: 426 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISE 485

Query: 494 CLEMDEVTFLTAIQACSNIGQL--------EKGKWVHHKLISYGVRKDI-YIDTALTDMY 544
            +E D VT L+  +ACS +G L        ++G+ VH  +I   +  ++ ++  AL ++Y
Sbjct: 486 AVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 545

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           A  G+L+   +VF+++ E+ ++SW+ +I  +  +GQ  +A  LF QM   G+ P+  +  
Sbjct: 546 ADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLA 605

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           + L AC      + G      +   G   D    A ++D+ ++ G +  A KM   +
Sbjct: 606 SSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNA-LIDMYAKCGFVHSANKMFEKI 661



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 13/142 (9%)

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           LT+ + C+    L +   +H  L   G+ +     T L + YA+ G  ++++RVFD+  +
Sbjct: 352 LTSHKRCATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPK 408

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEVTFMNILWACS---------H 612
            +   W  +I CY   G   +A SL+ +M+     + +   F ++L ACS          
Sbjct: 409 PDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGK 468

Query: 613 SGSVEEGKFYFNAMRIFGVEPD 634
           +G   EG   F+ M    VEPD
Sbjct: 469 NGQASEGLDMFSQMISEAVEPD 490



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C++L  L +   +H  L++ GL  D    T L + Y++ G L+ +  VFD   E
Sbjct: 705 LSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE 764

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
                W+V+I  Y  +     +I L+++M+      ++  +  +L ACS  G +  G+
Sbjct: 765 RSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGK 822


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/744 (35%), Positives = 417/744 (56%), Gaps = 6/744 (0%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT+   L++    HA +LV G+ Y+    T+L+  Y   G+   ++ +F   +   
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I+ +     F+ ++L Y KM+        + +P V++AC  L  +  G  VH 
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +I   GF+ D  + +S++  Y E GC+ DAR +FD+M S+D V W+ ++  Y  N D   
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              +F  M R    P+ VT   +   C     +     +HG V+   +++D P+ N+ + 
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG L  A R F  + K    +W  MIS Y ++G+  +A   F +M+  + +P+ IT
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSIT 351

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + L   +    LR+GK +HC IIR G+  +  +L  ALI+ Y +C  +    K+    
Sbjct: 352 FSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDV-FLKSALIDIYFKCRDVEMARKIFDQR 410

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              +I+    +IS Y   GM+  ALE+   +    +  +S ++AS L AC  + +L LG 
Sbjct: 411 TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGK 470

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           ++HGH++K       +V S+++DMY+KCG  +LA+  F  I  K  V WNSMI    QNG
Sbjct: 471 ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNG 530

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EAI+LF QM +   + D V+   A+ AC+N+  L  GK +H  ++    R D++ ++
Sbjct: 531 KPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAES 590

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMY+KCG+L  A RVFD+M E+N VSW+++I  YG HG+L D+ +LF  ML  GI+P
Sbjct: 591 ALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQP 650

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + VTF+ I+ AC H+G V+EG  YF  M    G+   ++HYACMVDL  R+G +  AF M
Sbjct: 651 DHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGM 710

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I+SMPF  +  +WG LL  CR+H  +++ +   + L      ++GYY LLSN++A  G W
Sbjct: 711 INSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQW 770

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           +   K+RS+M+  G++KVPG S I
Sbjct: 771 ESVLKIRSLMKERGVQKVPGCSWI 794



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 288/586 (49%), Gaps = 5/586 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+ C+    L  G + H +++  G   + ++ T +L  Y   G   DA+ +F ++   
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
               W+ +I  +         L  +  M+  G  PD  T   + +ACG L S+   R +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             +     ++D  +G+S I  YS+ G +  A   F ++  +    W  M++ Y ++G + 
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPA 338
            A   F++M   +  PN +T   VL  CA    +  G  +H  ++  G+  E D  +   
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL--EMDSPVANT 288

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L+  YA+CG + +  ++   + + ++++WN +IS Y + G   EA  L  +M +  + PD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
           S + +S L       +L+ G +IH ++I+     D F++S+LID+Y KC    +A  +F+
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           +     +V+  +MI G+  NG +  A+ +F  +    +  + VT  + + AC+ +  L  
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  ++  G     Y+ +A+ DMYAKCG L  A + F  +S+++ V W++MI     
Sbjct: 469 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQ 528

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
           +G+  +A  LF+QM  +G K + V+    L AC++  ++  GK     M       DL  
Sbjct: 529 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFA 588

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            + ++D+ S+ G+++ A ++  +M    N   W +++     H R+
Sbjct: 589 ESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSIIAAYGNHGRL 633



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 260/511 (50%), Gaps = 8/511 (1%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           + + P  V++L   + C +   L   R  H  +L   I  +G LG   + MY  CG  L 
Sbjct: 43  DSLAPQLVSIL---QTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD 99

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A+  F ++   C+  W  MI  +   G F  AL  + KML     P+  T   V+ +C G
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGG 159

Query: 310 LGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
           L  +  G+ VH +I  + MG E D ++G +LI+FY+E G + +   +   +  ++ + WN
Sbjct: 160 LNSVALGRVVHDKI--QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWN 217

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
           ++++ Y + G    A  + ++M+     P+S + A  LS C +   +  G Q+HG V+  
Sbjct: 218 VMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS 277

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
             + D  V ++L+ MY+KCG    A  LF+ + +  +V WN MI G+ QNG   EA  LF
Sbjct: 278 GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLF 337

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
           H+M    ++ D +TF + +   S    L +GK +H  +I  GV  D+++ +AL D+Y KC
Sbjct: 338 HEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKC 397

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            D++ A+++FD  +  ++V  +AMI  Y ++G  N+A  +F+ +L   ++ N VT  ++L
Sbjct: 398 RDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVL 457

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+   ++  GK     +   G        + ++D+ ++ G ++ A +    +    + 
Sbjct: 458 PACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS-DKDA 516

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
             W +++  C  + + +    + +++ + GT
Sbjct: 517 VCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 547



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 177/360 (49%), Gaps = 2/360 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL      LR+   +H +++  G+  D    + LI+ Y +   +  +R +FD     D 
Sbjct: 356 LPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDI 415

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +   +I  Y+ N     ++ ++  +++E+   ++    SVL AC+ L  L  G+++HG 
Sbjct: 416 VVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGH 475

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K G      + ++I+  Y + G LD A + F  ++ +D V W+S+I S   N    E 
Sbjct: 476 ILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEA 535

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G + D V++ +   AC  L +L   + IH  ++R   + D    ++ I M
Sbjct: 536 IDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDM 595

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG+L  A R F  +E++   SW ++I+ Y   G  + +L  F  ML    +P+ +T 
Sbjct: 596 YSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 655

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++ +C   G + EG     C     G+    ++    +++ +   G+++E   +I+++
Sbjct: 656 LAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA-CMVDLFGRAGRLNEAFGMINSM 714


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/740 (34%), Positives = 403/740 (54%), Gaps = 3/740 (0%)

Query: 4    FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            F + + L +  R+H   +  GL+ D    T L   +   G +  ++   + F + D  ++
Sbjct: 294  FTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVY 353

Query: 64   AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
              LI     +  +EE+   Y++M  +   ++   Y SVL ACS+   LG+GE +H  I +
Sbjct: 354  NALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISE 413

Query: 124  CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             G   D  I  S++  Y   G L  AR++F+ M  RD++SW++IIA Y    D  E +K+
Sbjct: 414  VGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKL 473

Query: 184  FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
            +  M  EGV+P  VT L L  AC    +    + IH  +LR  IK +G L N+ + MY +
Sbjct: 474  YKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRR 533

Query: 244  CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
            CG ++ A+  F     R   SW +MI+ + + G ++ A + F++M +   EP+ IT  +V
Sbjct: 534  CGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASV 593

Query: 304  LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
            L  C     L  G+ +H  II  G+  + + LG ALI  Y  CG + +  +V H++  RN
Sbjct: 594  LVGCKNPEALELGRQIHMLIIESGLQLDVN-LGNALINMYIRCGSLQDAYEVFHSLRHRN 652

Query: 364  ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            ++SW  +I  +A +G  ++A EL  QMQ  G  P   + +S L AC +   L  G ++  
Sbjct: 653  VMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIA 712

Query: 424  HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            H++    + D  V ++LI  YSK G    A  +F+++  + ++ WN MI G+ QNG    
Sbjct: 713  HILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGT 772

Query: 483  AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            A+   +QM    + +++ +F++ + ACS+   LE+GK VH +++   ++ D+ +  AL  
Sbjct: 773  ALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALIS 832

Query: 543  MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
            MYAKCG L+ AQ VFD+ +E+NVV+W+AMI+ Y  HG  + A   F  M   GIKP+  T
Sbjct: 833  MYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGST 892

Query: 603  FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            F +IL AC+HSG V EG   F+++    G+ P ++HY C+V LL R+G  + A  +I+ M
Sbjct: 893  FTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQM 952

Query: 662  PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
            PFP + ++W  LL  CRIH  + + +            +   Y LLSN+YA  G WD+  
Sbjct: 953  PFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVA 1012

Query: 722  KVRSIMEVTGLKKVPGYSTI 741
            K+R +ME  G++K PG S I
Sbjct: 1013 KIRRVMEGRGIRKEPGRSWI 1032



 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 212/664 (31%), Positives = 342/664 (51%), Gaps = 5/664 (0%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++CT  R L    R+HA ++  G+  D   S  LI  Y +  S+  +  VF      D
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI CY    F +++  L+ +M       S   Y S+L AC S  +L  G+K+H 
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +II+ G+ +D  +Q S+L  YG+   L  AR+VF  +  RDVVS+++++  Y   A V E
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  M  EG+ PD VT ++L +A      L   + IH   +   +  D  +G +   
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           M+ +CGD+  A++       R    + A+I+   + G +++A E + +M       N  T
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++VL +C+    L  G+ +H  I   G   +   +G +LI  YA CG +    ++ + +
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGHSSDVQ-IGNSLISMYARCGDLPRARELFNTM 446

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +R+++SWN +I+ YAR+    EA++L  QMQ+ G+ P   +    LSAC N  +   G 
Sbjct: 447 PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH  +++   K    + ++L++MY +CG    A  +FE  + + ++ WNSMI G  Q+G
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +   A  LF +M    LE D++TF + +  C N   LE G+ +H  +I  G++ D+ +  
Sbjct: 567 SYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL +MY +CG LQ A  VF S+  RNV+SW+AMI  +   G+   A  LF QM + G KP
Sbjct: 627 ALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKP 686

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            + TF +IL AC  S  ++EGK     +   G E D      ++   S+SG +  A K+ 
Sbjct: 687 VKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVF 746

Query: 659 HSMP 662
             MP
Sbjct: 747 DKMP 750



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 303/580 (52%), Gaps = 3/580 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +++ C+    L   +++H ++++ G   D  +   ++  Y +   + DA +VF KM 
Sbjct: 85  YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP 144

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDV+SW+S+I+ Y       +  ++F  M   G  P  +T +S+  AC     L   + 
Sbjct: 145 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKK 204

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  ++    + D  + NS + MY KC DL SA + F  I +R   S+  M+  Y +  +
Sbjct: 205 IHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAY 264

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            ++ +  F +M      P+ +T I +L +      L EGK +H   + +G+  +   +G 
Sbjct: 265 VEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR-VGT 323

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL   +  CG ++  ++ + A  +R+++ +N LI+  A+ G  +EA E   QM++ G++ 
Sbjct: 324 ALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM 383

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  +  S L+AC    +L  G  IH H+ ++    D  + +SLI MY++CG    A  LF
Sbjct: 384 NRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELF 443

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             + ++ ++ WN++I G+ +  +  EA+ L+ QM    ++   VTFL  + AC+N     
Sbjct: 444 NTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYS 503

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK +H  ++  G++ + ++  AL +MY +CG +  AQ VF+    R+++SW++MI  + 
Sbjct: 504 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHA 563

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            HG    A  LF +M   G++P+++TF ++L  C +  ++E G+     +   G++ D+ 
Sbjct: 564 QHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVN 623

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
               ++++  R G ++ A+++ HS+    N   W A++ G
Sbjct: 624 LGNALINMYIRCGSLQDAYEVFHSLRH-RNVMSWTAMIGG 662



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 236/461 (51%), Gaps = 2/461 (0%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            E +    + L + C    SL  A+ IH  ++   +  D  L N  I MY KC  +  A 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F+K+ +R   SW ++ISCY + G+ +KA + F +M      P+ IT I++L +C    
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  GK +H +II  G   +   +  +L+  Y +C  +    +V   I  R+++S+N ++
Sbjct: 198 ELEYGKKIHSKIIEAGYQRD-PRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTML 256

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA+K   +E + L  QM + G+ PD  +  + L A      L  G +IH   +     
Sbjct: 257 GLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLN 316

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            +  V ++L  M+ +CG    A    E    + VV++N++I    Q+G+  EA   ++QM
Sbjct: 317 SDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQM 376

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
             + + M+  T+L+ + ACS    L  G+ +H  +   G   D+ I  +L  MYA+CGDL
Sbjct: 377 RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDL 436

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ +F++M +R+++SW+A+I  Y       +A  L+KQM   G+KP  VTF+++L AC
Sbjct: 437 PRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC 496

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           ++S +  +GK     +   G++ +      ++++  R G I
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSI 537



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 85/159 (53%)

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           E +   ++  +Q C+    L + K +H +++  GV  DI++   L +MY KC  +  A +
Sbjct: 79  ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VF  M  R+V+SW+++I CY   G    A  LF++M  +G  P+++T+++IL AC     
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           +E GK   + +   G + D +    ++++  +  D+  A
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSA 237


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/744 (32%), Positives = 412/744 (55%), Gaps = 7/744 (0%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C   + L    R++ H+  +G+  D      LI  YA+ G+  S++ +FD  +E D
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKD 175

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W +L+  Y+ +  +EE+  L+ +M+++        + S+L AC+   ++  G +++ 
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I+K G+D D  + T+++  + + G + DA KVFD + +RD+V+W+S+I     +    +
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              +F  M  EGV+PD V  +SL  AC    +L   + +H  +       +  +G + + 
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS 355

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  A   F  ++ R   SWTAMI+ + + G   +A   F KM+E   EPN +T
Sbjct: 356 MYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++LG+C+    L+ G+ +   II  G G + D +  AL+  YA+CG + +  +V   I
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSD-DRVRTALLSMYAKCGSLKDAHRVFEKI 474

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++N+++WN +I+ Y +      AL     +   G+ P+S +  S L+ C +  SL+LG 
Sbjct: 475 SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK 534

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H  ++K   + D  V ++L+ M+  CG    A  LF  + ++ +V WN++I GF Q+G
Sbjct: 535 WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHG 594

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            +  A + F  M  + ++ D++TF   + AC++   L +G+ +H  +       D+ + T
Sbjct: 595 KNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGT 654

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
            L  MY KCG ++ A +VF  + ++NV SW++MI  Y  HG+  +A  LF QM   G+KP
Sbjct: 655 GLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKP 714

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           + +TF+  L AC+H+G +EEG  +F +M+ F +EP ++HY CMVDL  R+G +  A + I
Sbjct: 715 DWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFI 774

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVM-KTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
             M    +  +WGALL  C++H  +++  K  +K+L +   NDNG + +LSNIYA  G W
Sbjct: 775 IKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELD-PNDNGVFVILSNIYAAAGMW 833

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
            E  K+R +M   G+ K PG S I
Sbjct: 834 KEVAKMRKVMLDRGVVKKPGQSWI 857



 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 178/608 (29%), Positives = 325/608 (53%), Gaps = 3/608 (0%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F E++ +  ++      I    Y ++L+ C    +LG GE+++  I K G   D  ++ +
Sbjct: 91  FNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNT 150

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G    A+++FD M  +DV SW+ ++  Y  +    E  K+   MV++ V+PD
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T +S+  AC +  ++   R ++  +L+     D  +G + I M+ KCGD+  A + F 
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   +WT+MI+   R G F++A   F +M E   +P+ +  +++L +C     L +
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH ++   G   E  Y+G A++  Y +CG M +  +V   +  RN++SW  +I+ +A
Sbjct: 331 GKKVHARMKEVGWDTEI-YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEF 434
           + G   EA     +M   G+ P+  +  S L AC +  +L+ G QI  H+I+     D+ 
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V+++L+ MY+KCG    A+ +FE+I +++VV WN+MI  + Q+     A+  F  +    
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ +  TF + +  C +   LE GKWVH  ++  G+  D+++  AL  M+  CGDL +A+
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F+ M +R++VSW+ +I  +  HG+   A   FK M +SGIKP+++TF  +L AC+   
Sbjct: 570 NLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           ++ EG+     +     + D+     ++ + ++ G IE A ++ H +P   N   W +++
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMI 688

Query: 675 NGCRIHKR 682
            G   H R
Sbjct: 689 AGYAQHGR 696



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 121/215 (56%), Gaps = 1/215 (0%)

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           N+++    + G   EA+ +  ++  + +++   T+   +Q C     L  G+ +++ +  
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            GV+ DI++   L +MYAKCG+  +A+++FD M E++V SW+ ++  Y  HG   +A  L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
            +QM+   +KP++ TF+++L AC+ + +V++G+  +N +   G + DL     ++++  +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
            GDI  A K+  ++P   +   W +++ G   H R
Sbjct: 259 CGDIGDATKVFDNLP-TRDLVTWTSMITGLARHGR 292


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/744 (32%), Positives = 412/744 (55%), Gaps = 7/744 (0%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C   + L    R++ H+  +G+  D      LI  YA+ G+  S++ +FD  +E D
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKD 175

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W +L+  Y+ +  +EE+  L+ +M+++        + S+L AC+   ++  G +++ 
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I+K G+D D  + T+++  + + G + DA KVFD + +RD+V+W+S+I     +    +
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              +F  M  EGV+PD V  +SL  AC    +L   + +H  +       +  +G + + 
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS 355

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  A   F  ++ R   SWTAMI+ + + G   +A   F KM+E   EPN +T
Sbjct: 356 MYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++LG+C+    L+ G+ +   II  G G + D +  AL+  YA+CG + +  +V   I
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSD-DRVRTALLSMYAKCGSLKDAHRVFEKI 474

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++N+++WN +I+ Y +      AL     +   G+ P+S +  S L+ C +  SL+LG 
Sbjct: 475 SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK 534

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H  ++K   + D  V ++L+ M+  CG    A  LF  + ++ +V WN++I GF Q+G
Sbjct: 535 WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHG 594

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            +  A + F  M  + ++ D++TF   + AC++   L +G+ +H  +       D+ + T
Sbjct: 595 KNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGT 654

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
            L  MY KCG ++ A +VF  + ++NV SW++MI  Y  HG+  +A  LF QM   G+KP
Sbjct: 655 GLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKP 714

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           + +TF+  L AC+H+G +EEG  +F +M+ F +EP ++HY CMVDL  R+G +  A + I
Sbjct: 715 DWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFI 774

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVM-KTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
             M    +  +WGALL  C++H  +++  K  +K+L +   NDNG + +LSNIYA  G W
Sbjct: 775 IKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELD-PNDNGVFVILSNIYAAAGMW 833

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
            E  K+R +M   G+ K PG S I
Sbjct: 834 KEVAKMRKVMLDRGVVKKPGQSWI 857



 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 178/608 (29%), Positives = 324/608 (53%), Gaps = 3/608 (0%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F E++ +  ++      I    Y ++L+ C    +LG GE+++  I K G   D  +  +
Sbjct: 91  FNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNT 150

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G    A+++FD M  +DV SW+ ++  Y  +    E  K+   MV++ V+PD
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T +S+  AC +  ++   R ++  +L+     D  +G + I M+ KCGD+  A + F 
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   +WT+MI+   R G F++A   F +M E   +P+ +  +++L +C     L +
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH ++   G   E  Y+G A++  Y +CG M +  +V   +  RN++SW  +I+ +A
Sbjct: 331 GKKVHARMKEVGWDTEI-YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEF 434
           + G   EA     +M   G+ P+  +  S L AC +  +L+ G QI  H+I+     D+ 
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V+++L+ MY+KCG    A+ +FE+I +++VV WN+MI  + Q+     A+  F  +    
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ +  TF + +  C +   LE GKWVH  ++  G+  D+++  AL  M+  CGDL +A+
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F+ M +R++VSW+ +I  +  HG+   A   FK M +SGIKP+++TF  +L AC+   
Sbjct: 570 NLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           ++ EG+     +     + D+     ++ + ++ G IE A ++ H +P   N   W +++
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMI 688

Query: 675 NGCRIHKR 682
            G   H R
Sbjct: 689 TGYAQHGR 696



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 121/215 (56%), Gaps = 1/215 (0%)

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           N+++    + G   EA+ +  ++  + +++   T+   +Q C     L  G+ +++ +  
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            GV+ DI++   L +MYAKCG+  +A+++FD M E++V SW+ ++  Y  HG   +A  L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
            +QM+   +KP++ TF+++L AC+ + +V++G+  +N +   G + DL     ++++  +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
            GDI  A K+  ++P   +   W +++ G   H R
Sbjct: 259 CGDIGDATKVFDNLP-TRDLVTWTSMITGLARHGR 292


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/750 (34%), Positives = 422/750 (56%), Gaps = 14/750 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           L ++C N + +    RLH   +    HY  D   +TRLI+ YA  GS   SRLVFD  + 
Sbjct: 49  LLQACGNQKDIETGRRLHK-FVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEK 116
            +   W  L+  Y  N  + + + ++  ++ +      NF +PSV++AC  + D+  GE 
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +HG +IK G   D  +  +++  YG+ G +D+A KVFD M   ++VSW+S+I ++ +N  
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227

Query: 177 VSEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
             +   +   M+  EG+ PD VT++++   C     +     IHG  ++  +  +  + N
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNN 287

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE- 294
           + + MYSKCG L  A+ +FVK   +   SW  MIS ++  G   +A     +M    EE 
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347

Query: 295 -PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N +T++ VL +C     LR  K +H    R     ++  L  A I  YA+CG ++  E
Sbjct: 348 KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF--QHVELSNAFILAYAKCGALNSAE 405

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV H IG++ + SWN LI  +A+ G  ++AL LL QM   G  PD F+++S L AC ++ 
Sbjct: 406 KVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLK 465

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           SLQ G +IHG+V++   + D FV +SL+  Y  CG  + A +LF+R++ K++V WN+MI 
Sbjct: 466 SLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMIS 525

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+ QNG   E++ LF +     ++  E+  ++   ACS +  L  GK  H  ++     +
Sbjct: 526 GYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTE 585

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D ++  ++ DMYAK G ++ +++VFD + ++NV SW+A+I  +G+HG   +A  L+++M 
Sbjct: 586 DAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMK 645

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG-VEPDLQHYACMVDLLSRSGDI 651
             G  P+  T++ IL AC H+G VEEG  YF  M+ F  +EP L+HYAC++D+L+R+G +
Sbjct: 646 KVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRL 705

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           + A ++++ MP  A+  IW +LL  CR    +++ + + K+L     +    Y LLSN+Y
Sbjct: 706 DDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLY 765

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A  G WD   +VR +M+  GL+K  G S I
Sbjct: 766 AGLGKWDGVRRVRQMMKEIGLQKDAGCSWI 795


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/728 (33%), Positives = 415/728 (57%), Gaps = 3/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++V+GL  D   +  LI   ++   + ++R+VFD     +   W+ ++  Y    +
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 108

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            EE+++++  + R+     N F+  SV+RAC+ LG +  G ++HG +++ GFD+D  + T
Sbjct: 109 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 168

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y + G +++AR VFD+++ +  V+W++IIA Y      +  L++F  M    V P
Sbjct: 169 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 228

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D   + S+  AC  L  L   + IH +VLRR  ++D  + N  I  Y+KC  + +  + F
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 288

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  +   SWT MIS Y ++ +  +A++ F +M  +  +P+     +VL SC     L 
Sbjct: 289 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH   I+  +  + +++   LI+ YA+   + + +KV   + E+N++S+N +I  Y
Sbjct: 349 QGRQVHAYTIKANLESD-EFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 407

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
           + +    EALEL  +M+     P   +  S L    ++ +L+L  QIHG +IK     D 
Sbjct: 408 SSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDL 467

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           F  S+LID+YSKC +   A  +FE + +K +V+WN+M  G+ Q+  + EA+ L+  +  +
Sbjct: 468 FAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFS 527

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
             + +E TF   I A SN+  L  G+  H++L+  G+    ++  AL DMYAKCG ++ A
Sbjct: 528 RQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 587

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           +++F+S   R+VV W++MI  +  HG+  +A  +F++M+  GI+PN VTF+ +L ACSH+
Sbjct: 588 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 647

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
           G VE+G  +FN+M  FG++P  +HYAC+V LL RSG +  A + I  MP      +W +L
Sbjct: 648 GRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSL 707

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CRI   +++ K   +    T   D+G Y LLSNI+A +G W +  KVR  M+ + + 
Sbjct: 708 LSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVV 767

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 768 KEPGRSWI 775



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 181/651 (27%), Positives = 324/651 (49%), Gaps = 40/651 (6%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+CT L    K  +LH  ++ +G   D    T LI+ Y++ G++  +RLVFD   E  
Sbjct: 135 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT 194

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I  Y        S+ L+ +M         ++  SVL ACS L  L  G+++H 
Sbjct: 195 AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 254

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +++ G + D  +   ++  Y +   +   RK+FD+M  ++++SW+++I+ Y  N+   E
Sbjct: 255 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 314

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +K+F  M R G +PD     S+  +CG   +L   R +H + ++  ++ D  + N  I 
Sbjct: 315 AMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLID 374

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K   L+ A++ F  + ++   S+ AMI  Y+      +ALE F +M      P+L+T
Sbjct: 375 MYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLT 434

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++LG  A L  L   K +H  II+ G+  +  + G ALI+ Y++C  + +   V   +
Sbjct: 435 FVSLLGVSASLFALELSKQIHGLIIKFGVSLDL-FAGSALIDVYSKCSYVKDARHVFEEM 493

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++I+ WN +   Y +   ++EAL+L   +Q     P+ F+ A+ ++A  N+ SL+ G 
Sbjct: 494 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 553

Query: 420 QIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H  ++K+      FV ++L+DMY+KCG    A  +F     + VV WNSMI    Q+G
Sbjct: 554 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 613

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            + EA+ +F +M    ++ + VTF+  + ACS+ G++E G    + +  +G++       
Sbjct: 614 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPG----- 668

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
             T+ YA                         ++   G  G+L +A    ++M    I+P
Sbjct: 669 --TEHYA------------------------CVVSLLGRSGKLFEAKEFIEKM---PIEP 699

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
             + + ++L AC  +G+VE GK Y   M I     D   Y  + ++ +  G
Sbjct: 700 AAIVWRSLLSACRIAGNVELGK-YAAEMAISTDPKDSGSYILLSNIFASKG 749



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K +H ++I  G++ D ++   L ++ +K   +  A+ VFD M  +N+++WS+M+  Y   
Sbjct: 47  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 106

Query: 579 GQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
           G   +A  +F  +   SG  PNE    +++ AC+  G VE+G      +   G + D+  
Sbjct: 107 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 166

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              ++D  S++G+IE A +++           W  ++ G
Sbjct: 167 GTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWTTIIAG 204


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/730 (33%), Positives = 402/730 (55%), Gaps = 5/730 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
            LHAHL+  G   DP     L+  Y++      +R + D   E D   W+ L+  Y+ N 
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           F EE++L++++M       + F +PSVL+ACS   DL  G KVHG  +  GF+ D  +  
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G LDD+R++F  +  R+VVSW+++ + Y  +    E + +F  MVR G+ P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  ++  +  AC  L      R IHG +L+  + +D    N+ + MYSK G++  A   F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             I      SW A+I+          AL    +M      PN+ TL + L +CA +G+  
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301

Query: 315 EGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            G+ +H  +I+  M    D +    L++ Y++C  M +  +   ++ +++I++WN LIS 
Sbjct: 302 LGRQLHSSLIK--MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
           Y++ G   +A+ L  +M +  +  +  ++++ L +  ++ ++++  QIH   IK     +
Sbjct: 360 YSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSD 419

Query: 434 F-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           F V +SL+D Y KC   + A  +FE    + +V + SMI  + Q G+  EA+ L+ QM  
Sbjct: 420 FYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQD 479

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             ++ D     + + AC+N+   E+GK +H   I +G   DI+   +L +MYAKCG ++ 
Sbjct: 480 ADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIED 539

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A R F  +  R +VSWSAMI  Y  HG   +A  LF QML  G+ PN +T +++L AC+H
Sbjct: 540 ADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNH 599

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G V EGK YF  M + FG++P  +HYACM+DLL RSG +  A ++++S+PF A+G +WG
Sbjct: 600 AGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWG 659

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL   RIHK I++ +   K L       +G + LL+NIYA  G W+   KVR  M+ + 
Sbjct: 660 ALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSK 719

Query: 732 LKKVPGYSTI 741
           +KK PG S I
Sbjct: 720 VKKEPGMSWI 729



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/597 (27%), Positives = 297/597 (49%), Gaps = 7/597 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+  R L    ++H   +VTG   D   +  L+  YA+ G L  SR +F    E +
Sbjct: 88  VLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERN 147

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  L  CY+ +    E++ L+ +M+R     + F    +L AC+ L +   G K+HG
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG 207

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K G D D     +++  Y + G ++ A  VF  +   DVVSW++IIA    +     
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL 267

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +   M   G  P+  T+ S  +AC  +      R +H  +++     D       + 
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKC  +  A R +  + K+   +W A+IS Y++ G    A+  F KM     + N  T
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L TVL S A L  ++  K +H   I+ G+  ++ Y+  +L++ Y +C  + E  K+    
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF-YVINSLLDTYGKCNHIDEASKIFEER 446

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              +++++  +I+ Y++ G  +EAL+L +QMQ   + PD F  +S L+AC N+ + + G 
Sbjct: 447 TWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGK 506

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H H IK     D F  +SL++MY+KCG    A   F  I  + +V W++MI G+ Q+G
Sbjct: 507 QLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHG 566

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYID 537
           +  EA+ LF+QM  + +  + +T ++ + AC++ G + +GK    K+ + +G++      
Sbjct: 567 HGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHY 626

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             + D+  + G L  A  + +S+  E +   W A++    +H  +       K + D
Sbjct: 627 ACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFD 683


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/752 (33%), Positives = 413/752 (54%), Gaps = 14/752 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGL---HYDPPASTRLIESYAEMGSLRSSRLVFDT 54
           + L R C +   L    ++HA  +V+G    H      TRL+  Y      R +  VF  
Sbjct: 36  LALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSA 95

Query: 55  FKEP---DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY--PSVLRACSSLG 109
                   S  W  LI+ +        ++L Y KM    A  S   +  P V+++C++LG
Sbjct: 96  LPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALG 155

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
            +  G  VH      G   D  + ++++  Y + G L DAR  FD M  RD V W+ ++ 
Sbjct: 156 AVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMD 215

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
            Y    DV   +++F +M   G EP+F T+      C     L     +H   ++  ++ 
Sbjct: 216 GYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQ 275

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           +  + N+ + MY+KC  L  A R F  + +    +W  MIS   ++G   +AL  F  ML
Sbjct: 276 EVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDML 335

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
                P+ +TL+++L +   L  L++GK VH  IIR  +  +  +L  AL++ Y +C  +
Sbjct: 336 RSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMD-AFLVSALVDIYFKCRDV 394

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
                +  A    +++  + +IS Y   GMS++AL++   +    + P++ +VAS L AC
Sbjct: 395 RTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPAC 454

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            ++ +L LG +IHG+V++   + + +V+S+L+DMY+KCG  +L++ +F ++  K  V WN
Sbjct: 455 ASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWN 514

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           SMI  F QNG   EA++LF QM +  ++ + VT  +A+ AC+++  +  GK +H  +I  
Sbjct: 515 SMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKG 574

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            ++ DI+ ++AL DMYAKCG+++ A RVF+ M ++N VSW+++I  YG HG + ++ S  
Sbjct: 575 PIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFL 634

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSR 647
            +M + G KP+ VTF+ ++ AC+H+G VEEG   F  M + + + P ++H+ACMVDL SR
Sbjct: 635 HRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSR 694

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
           SG ++ A + I  MPF  +  IWGALL+ CR+H+ +++     +EL      ++GYY L+
Sbjct: 695 SGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLM 754

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           SNI A  G WD   KVR +M+   + K+PGYS
Sbjct: 755 SNINAVAGRWDGVSKVRRLMKDNKILKIPGYS 786


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/745 (34%), Positives = 398/745 (53%), Gaps = 7/745 (0%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++CT  R L    R+HA ++  G+  D   S  LI  Y +  S+  +  VF      D
Sbjct: 33  LLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRD 92

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI CY    F +++  L+ +M       +   Y S+L AC S  +L +G+K+H 
Sbjct: 93  VISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHS 152

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +IIK G+ +D  +Q S+L  YG+ G L  AR+VF  ++ RDVVS+++++  Y   A V E
Sbjct: 153 QIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M  EG+ PD VT ++L +A      L   + IH   +   +  D  +G + + 
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVT 272

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           M  +CGD+ SA++ F  I  R    + A+I+   + G   +A E + +M       N  T
Sbjct: 273 MCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTT 332

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++L +C+    L  GK +H  I   G   +   +G ALI  YA CG + +  ++ + +
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ-IGNALISMYARCGDLPKARELFYTM 391

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +R+++SWN +I+ YAR+    EA+ L  QMQ+ G+ P   +    LSAC N  +   G 
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH  +++   K    + ++L++MY +CG    A  +FE  Q + V+ WNSMI G  Q+G
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHG 511

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +   A  LF +M    LE D +TF + +  C N   LE GK +H ++   G++ D+ +  
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL +MY +CG LQ A+ VF S+  R+V+SW+AMI      G+   A  LF QM + G +P
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRP 631

Query: 599 NE-VTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            +  TF +IL AC+H+G V EG   F++M   +GV P ++HY C+V LL R+   + A  
Sbjct: 632 PDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAET 691

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           +I+ MPFP + ++W  LL  CRIH  I + +            +   Y LLSN+YA  G 
Sbjct: 692 LINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGR 751

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
           WD+  K+R +ME  G++K PG S I
Sbjct: 752 WDDVAKIRRVMEGRGIRKEPGRSWI 776



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 307/594 (51%), Gaps = 5/594 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L+ C+    L   +++H ++++ G   D  +   ++  Y +   + DA +VF +M 
Sbjct: 30  YVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP 89

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDV+SW+S+I+ Y       +  ++F  M   G  P+ +T +S+  AC     L   + 
Sbjct: 90  RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKK 149

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  +++   + D  + NS + MY KCGDL  A + F  I  R   S+  M+  Y +  +
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAY 209

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            ++ L  F +M      P+ +T I +L +      L EGK +H   + +G+  +   +G 
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI-RVGT 268

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL+     CG +   ++    I +R+++ +N LI+  A+ G + EA E   +M++ G+  
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  +  S L+AC    +L+ G  IH H+ +     D  + ++LI MY++CG    A  LF
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             + ++ ++ WN++I G+ +  +  EA+ L+ QM    ++   VTFL  + AC+N     
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK +H  ++  G++ + ++  AL +MY +CG L  AQ VF+    R+V+SW++MI  + 
Sbjct: 449 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHA 508

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            HG    A  LF++M +  ++P+ +TF ++L  C +  ++E GK     +   G++ D+ 
Sbjct: 509 QHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVN 568

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
               ++++  R G ++ A  + HS+      S W A++ GC    + + MK IE
Sbjct: 569 LGNALINMYIRCGSLQDARNVFHSLQHRDVMS-WTAMIGGCA--DQGEDMKAIE 619



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 245/461 (53%), Gaps = 2/461 (0%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            E D  T ++L + C     L  A+ IH  ++   +  D  L N  I MY KC  +L A 
Sbjct: 23  TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F ++ +R   SW ++ISCY + G+ +KA + F +M      PN IT I++L +C    
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  GK +H QII+ G   +   +  +L+  Y +CG +    +V   I  R+++S+N ++
Sbjct: 143 ELENGKKIHSQIIKAGYQRD-PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA+K   KE L L  QM + G+ PD  +  + L A      L  G +IH   ++    
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            +  V ++L+ M  +CG  + A   F+ I  + VV++N++I    Q+G+++EA   +++M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
             + + ++  T+L+ + ACS    LE GK +H  +   G   D+ I  AL  MYA+CGDL
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ +F +M +R+++SW+A+I  Y       +A  L+KQM   G+KP  VTF+++L AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           ++S +  +GK     +   G++ +      ++++  R G +
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSL 482



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 89/162 (54%)

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           E D  T++  +Q C+    L + K +H +++  GV  DI++   L +MY KC  +  A +
Sbjct: 24  ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VF  M  R+V+SW+++I CY   G    A  LF++M ++G  PN++T+++IL AC     
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           +E GK   + +   G + D +    ++ +  + GD+  A ++
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/705 (34%), Positives = 390/705 (55%), Gaps = 3/705 (0%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y   GSL+ ++ +F T +   +  W  +I+ +     F  ++L Y KM+    +   + +
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
           P V++AC  L  +  G+ VH  +   G  +D  + +S++  Y E G L DA+ +FD +  
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           +D V W+ ++  Y  N D    +K+F  M    ++P+ VT   +   C     L     +
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG  +   +++D P+ N+ + MYSKC  L +A + F    +    SW  +IS Y ++G  
Sbjct: 182 HGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLM 241

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
            +A   F  M+    +P+ IT  + L     L  L+  K +H  IIR  +  +  +L  A
Sbjct: 242 GEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV-FLKSA 300

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI+ Y +C  +   +K++      + +    +IS Y   G +KEALE    +    + P 
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFE 457
           S + +S   A   + +L LG ++HG +IK    ++  V S+++DMY+KCG  +LA  +F 
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           RI +K  + WNSMI    QNG   EAINLF QM +     D V+   A+ AC+N+  L  
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  +I   +R D+Y +++L DMYAKCG+L  ++RVFD M ERN VSW+++I  YG 
Sbjct: 481 GKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGN 540

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG L +  +LF +ML +GI+P+ VTF+ I+ AC H+G V+EG  Y++ M   +G+   ++
Sbjct: 541 HGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARME 600

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYAC+ D+  R+G ++ AF+ I+SMPFP +  +WG LL  C IH  +++ +   K L   
Sbjct: 601 HYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDL 660

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              ++GYY LL+N+ A  G W +  KVRSIM+  G++KVPGYS I
Sbjct: 661 DPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWI 705



 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 185/597 (30%), Positives = 322/597 (53%), Gaps = 7/597 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L+ +     +H  + + GL  D    + LI+ YAE G L  ++ +FD   + D
Sbjct: 64  VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKD 123

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S +W V++  Y+ N     +I ++ +M   +   ++  +  VL  C+S   L  G ++HG
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             + CG + D  +  ++L  Y +  CL  ARK+FD     D+VSW+ II+ Y  N  + E
Sbjct: 184 IAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGE 243

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              +F  M+  G++PD +T  S      EL SL+  + IHG+++R  + +D  L ++ I 
Sbjct: 244 AEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALID 303

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC D+  A++   +     T   T MIS Y  +G  ++ALE+F  +++ + +P  +T
Sbjct: 304 IYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVT 363

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++  + AGL  L  GK +H  II+  +  E  ++G A+++ YA+CG++    +V + I
Sbjct: 364 FSSIFPAFAGLAALNLGKELHGSIIKTKL-DEKCHVGSAILDMYAKCGRLDLACRVFNRI 422

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++ + WN +I+  ++ G   EA+ L  QM   G   D  S++ +LSAC N+ +L  G 
Sbjct: 423 TEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGK 482

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           +IHG +IK   + D + +SSLIDMY+KCG  N +  +F+R+Q+++ V WNS+I  +  +G
Sbjct: 483 EIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHG 542

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
           +  E + LFH+M  N ++ D VTFL  I AC + GQ+++G ++ H     YG+   +   
Sbjct: 543 DLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHY 602

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             + DM+ + G L  A    +SM    +   W  ++    +HG +  A    K + D
Sbjct: 603 ACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFD 659



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 241/462 (52%), Gaps = 7/462 (1%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY + G L  A+  F  ++  CT++W  MI  +   G F  AL  ++KML     P+  T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              V+ +C GL  ++ GK VH  +   G+  E  ++G +LI+ YAE G +S+ + +   I
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGL-KEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +++ + WN++++ Y + G S  A+++ ++M+   + P+S + A  LS C +   L LG 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 420 QIHGHVIKIDCK---DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           Q+HG  I + C    D  V ++L+ MYSKC     A  LF+   Q  +V WN +I G+ Q
Sbjct: 180 QLHG--IAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG   EA +LF  M    ++ D +TF + +   + +  L+  K +H  +I + V  D+++
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +AL D+Y KC D++ AQ++    S  + V  + MI  Y ++G+  +A   F+ ++   +
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           KP  VTF +I  A +   ++  GK    ++    ++      + ++D+ ++ G ++ A +
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
           + + +    +   W +++  C  + R      + +++ + GT
Sbjct: 418 VFNRIT-EKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 197/429 (45%), Gaps = 34/429 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +L+    +H +++   +  D    + LI+ Y +   +  ++ +       D+
Sbjct: 267 LPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDT 326

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +   +I  Y+ N   +E++  +  +++E+   ++  + S+  A + L  L  G+++HG 
Sbjct: 327 VVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGS 386

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK   D+   + ++IL  Y + G LD A +VF+++T +D + W+S+I S   N    E 
Sbjct: 387 IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEA 446

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M  EG   D V++     AC  L +L   + IHG +++  ++ D    +S I M
Sbjct: 447 INLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDM 506

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG+L  + R F ++++R   SW ++IS Y   G  ++ L  F +ML    +P+ +T 
Sbjct: 507 YAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTF 566

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + ++ +C   G + EG       IR       +Y  PA +E YA    M           
Sbjct: 567 LGIISACGHAGQVDEG-------IRYYHLMTEEYGIPARMEHYACVADM----------- 608

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
                        + R G   EA E +  M      PD+    + L AC   G+++L   
Sbjct: 609 -------------FGRAGRLDEAFETINSMP---FPPDAGVWGTLLGACHIHGNVELAEV 652

Query: 421 IHGHVIKID 429
              H+  +D
Sbjct: 653 ASKHLFDLD 661


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/743 (33%), Positives = 409/743 (55%), Gaps = 5/743 (0%)

Query: 3   LFRSCT--NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           L + CT  +LR   ++HAH+  +GL  DP     LI  Y++  +   +R + D   EPD 
Sbjct: 63  LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDL 122

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W+ LI  Y  N     +++ +H+M       + F + SVL+ACS + DL  G++VHG 
Sbjct: 123 VSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGV 182

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++  GF+ D  +  +++  Y +     D++++FD++  R+VVSW+++ + Y       E 
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEA 242

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F+ MV  G++P+  ++ S+  AC  L      + IHG++++     D    N+ + M
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDM 302

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+K GDL  A   F KI++    SW A+I+        ++ALE   +M      PN+ TL
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTL 362

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            + L +CAG+G    G+ +H  +++  M  +  ++   L++ Y++C  + +     + + 
Sbjct: 363 SSALKACAGMGLKELGRQLHSSLMKMDMESDL-FVSVGLVDMYSKCDLLEDARMAFNLLP 421

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E+++++WN +IS Y++     EAL L V+M   G+  +  ++++ L +   +  + +  Q
Sbjct: 422 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 481

Query: 421 IHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +HG  +K     D +V +SLID Y KC     A  +FE      +V + SMI  + Q G 
Sbjct: 482 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 541

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             EA+ LF +M    L+ D     + + AC+N+   E+GK +H  ++ YG   DI+   +
Sbjct: 542 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS 601

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L +MYAKCG +  A R F  ++ER +VSWSAMI     HG    A  LF QML  G+ PN
Sbjct: 602 LVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPN 661

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            +T +++L AC+H+G V E K YF +M  +FG +P  +HYACM+DLL R+G I  A +++
Sbjct: 662 HITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELV 721

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
           + MPF AN S+WGALL   RIHK +++ +   + L +     +G + LL+NIYA  G W+
Sbjct: 722 NKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWE 781

Query: 719 EFGKVRSIMEVTGLKKVPGYSTI 741
              +VR +M  + +KK PG S I
Sbjct: 782 NVAEVRRLMRDSKVKKEPGMSWI 804



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 176/591 (29%), Positives = 320/591 (54%), Gaps = 5/591 (0%)

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           T ++  Y  +L  C +   L  G ++H  I K G   D  I+  ++  Y +      ARK
Sbjct: 53  TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           + D+ +  D+VSWS++I+ Y  N      L  FH M   GV+ +  T  S+ +AC  +  
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           LR  + +HG V+    + D  + N+ +VMY+KC + L ++R F +I +R   SW A+ SC
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y +  +  +A+  F +M+    +PN  +L +++ +C GL     GK +H  +I+  +G +
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK--LGYD 290

Query: 332 YD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +D +   AL++ YA+ G +++   V   I + +I+SWN +I+        ++ALELL QM
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
           +  G+ P+ F+++S+L AC  +G  +LG Q+H  ++K+D + D FV   L+DMYSKC   
Sbjct: 351 KRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 410

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A + F  + +K ++ WN++I G+ Q    +EA++LF +M+   +  ++ T  T +++ 
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           + +  +   + VH   +  G   DIY+  +L D Y KC  ++ A+R+F+  +  ++VS++
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 530

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           +MI  Y  +GQ  +A  LF +M D  +KP+     ++L AC++  + E+GK     +  +
Sbjct: 531 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 590

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           G   D+     +V++ ++ G I+ A +    +      S W A++ G   H
Sbjct: 591 GFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGGLAQH 640


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/730 (33%), Positives = 409/730 (56%), Gaps = 6/730 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHA LL +  H     +T+L+  Y + GSL+ +  VFD   E   F W  ++  ++ + 
Sbjct: 67  QLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSG 124

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            + E+I LY +M      I    +PSVL+AC +LG+   G ++HG  +KCGF +   +  
Sbjct: 125 KYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCN 184

Query: 135 SILCTYGEFGCLDDARKVFDK--MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           +++  YG+ G L  AR +FD   M   D VSW+SII+++       E L +F  M   GV
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGV 244

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
             +  T ++  +   +   ++    IHG  L+     D  + N+ I MY+KCG +  AER
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAER 304

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +  R   SW  ++S   ++  ++ AL  F  M    ++P+ ++++ ++ +    G 
Sbjct: 305 VFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGN 364

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  GK VH   IR G+      +G  LI+ YA+C  +         + E++++SW  +I+
Sbjct: 365 LLNGKEVHAYAIRNGLDSNMQ-IGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIA 423

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            YA+     EA+ L  ++Q  G+  D   + S L AC  + S     +IHG+V K D  D
Sbjct: 424 GYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD 483

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             +Q++++++Y + G ++ A   FE I+ K +V W SMI     NG  +EA+ LF+ +  
Sbjct: 484 IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             ++ D +  ++A+ A +N+  L+KGK +H  LI  G   +  I ++L DMYA CG ++ 
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           ++++F S+ +R+++ W++MI+  GMHG  N+A +LFK+M D  + P+ +TF+ +L+ACSH
Sbjct: 604 SRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSH 663

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           SG + EGK +F  M+  + +EP  +HYACMVDLLSRS  +E A++ + SMP   +  +W 
Sbjct: 664 SGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWC 723

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL  C IH   ++ +   KEL  + T ++G Y L+SNI+A +G W++  +VR  M+  G
Sbjct: 724 ALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNG 783

Query: 732 LKKVPGYSTI 741
           LKK PG S I
Sbjct: 784 LKKNPGCSWI 793



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 162/309 (52%), Gaps = 1/309 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL     +HA+ +  GL  +      LI+ YA+   ++     F+   E D   W  +I 
Sbjct: 364 NLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIA 423

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  N    E+I L+ K+  +   +   +  SVLRACS L       ++HG + K     
Sbjct: 424 GYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-A 482

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D ++Q +I+  YGE G  D AR+ F+ + S+D+VSW+S+I     N    E L++F+S+ 
Sbjct: 483 DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           +  ++PD + ++S   A   L SL+  + IHG ++R+   ++GP+ +S + MY+ CG + 
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           ++ + F  +++R    WT+MI+     G   +A+  F KM +    P+ IT + +L +C+
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACS 662

Query: 309 GLGWLREGK 317
             G + EGK
Sbjct: 663 HSGLMVEGK 671


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/748 (35%), Positives = 409/748 (54%), Gaps = 24/748 (3%)

Query: 12  KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +L R+HA  + +GL+  P  + +L+ +Y+  G    + L F     PD+F+W  LI+ + 
Sbjct: 28  ELLRVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHH 87

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF---DK 128
             + F  ++  + +M+   A  S F  P    A + LG LG G  VH   ++ G    D 
Sbjct: 88  CASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDG 147

Query: 129 DDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           D V + +S++  Y   G + DA KVF++M  RDVV+W+++I+    N +  EGL+    M
Sbjct: 148 DSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEM 207

Query: 188 VR----EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           VR      V P+  TM S  EACG L  L   R +HG+V++  I     + ++   MYSK
Sbjct: 208 VRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSK 267

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           C     A   F+++ ++   SWT++I  Y R G   +A+E F +M+E   +P+ I +  V
Sbjct: 268 CYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCV 327

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L      G +  GK+ H  I ++  G     +G ALI  Y +   +    +V   + +R+
Sbjct: 328 LSGLGNNGNVHGGKTFHAVITKRNFGDSV-LIGNALISMYGKFEMVDSAGRVFRLLHQRD 386

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF-------SVASSLSACGNVGSLQ 416
             SWN+++  Y + G   + LEL  +MQ    + D +       S+ S++S+C  +  L+
Sbjct: 387 ADSWNLMVVGYCKAGCDVKCLELYREMQ----LRDKYEFWCVADSLVSAISSCSRLAELR 442

Query: 417 LGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICG 473
           LG   H + IK  +D +D  V + LI MY +CG  + A  +F   + K  VV WN++I  
Sbjct: 443 LGRSAHCYSIKHLLD-EDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISS 501

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           +   G+S  A++L+ QM +  L  +  T +T I AC+N+  LE+G+ +H  +   G   D
Sbjct: 502 YAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYD 561

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + I+TAL DMYAKCG L  A+R+FDSM + +VV+W+ MI  YGMHG+   A  LF +M  
Sbjct: 562 VSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEG 621

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
             IKPN VTF+ IL A  HSG +EEG+  F  M  + +EP+L+HYACMVDLL +SG ++ 
Sbjct: 622 GSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQE 681

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A  M+ +MP   +G IWG LL+ C++H   ++   I K+   +   + GYY L+SN Y  
Sbjct: 682 AEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGG 741

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              WDE  K+R  M+  G++K  G+S +
Sbjct: 742 AKKWDEIEKLRETMKNLGVQKGVGWSAV 769



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 4/187 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + +  +C NL  L R   +H+++   G  YD   +T LI+ YA+ G L  +R +FD+  +
Sbjct: 531 ITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQ 590

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W V+I  Y  +   ++++ L+ KM       +   + ++L A    G L  G KV
Sbjct: 591 HDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKV 650

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNAD 176
             R+ K   + +      ++   G+ G L +A  +   M    D   W +++++   + +
Sbjct: 651 FTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDN 710

Query: 177 VSEGLKM 183
              GL++
Sbjct: 711 FEMGLRI 717


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/743 (35%), Positives = 408/743 (54%), Gaps = 16/743 (2%)

Query: 7   CTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFD--TFKEPDSFMW 63
           C  L +  ++HA+ L+ G L         LI  YA  G   +S L+F         +F+W
Sbjct: 47  CDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLW 106

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             LI+       F+     Y+ M+R         YP VL+ CS   ++  G +VHG   K
Sbjct: 107 NTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFK 165

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            GFD D  +  ++L  YG  G   DA KVFD+M  RD VSW+++I     +    E L  
Sbjct: 166 LGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGF 225

Query: 184 FHSMV--REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG---PLGNSFI 238
           F  MV  + G++PD VT++S+   C E      AR +H + L  K+ + G    +GN+ +
Sbjct: 226 FRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYAL--KVGLLGGHVKVGNALV 283

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y KCG   ++++ F +I++R   SW A+I+ ++  G +  AL+ F  M++    PN +
Sbjct: 284 DVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSV 343

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           T+ ++L     LG  + G  VH   ++  M  E D ++  +LI+ YA+ G       + +
Sbjct: 344 TISSMLPVLGELGLFKLGMEVHGFSLK--MAIESDVFISNSLIDMYAKSGSSRIASTIFN 401

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +G RNI+SWN +I+ +AR  +  EA+EL+ QMQ  G  P++ +  + L AC  +G L +
Sbjct: 402 KMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNV 461

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH  +I++    D FV ++L DMYSKCG  NLA  +F  I  +  V +N +I G+ +
Sbjct: 462 GKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSR 520

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
             +SLE++ LF +M L  +  D V+F+  + AC+N+  + +GK +H  L+       +++
Sbjct: 521 TNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFV 580

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             +L D+Y +CG +  A +VF  +  ++V SW+ MI  YGM G+L+ A +LF+ M + G+
Sbjct: 581 ANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGV 640

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           + + V+F+ +L ACSH G +E+G+ YF  M    +EP   HYACMVDLL R+G +E A  
Sbjct: 641 EYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAAD 700

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           +I  +    + +IWGALL  CRIH  I++     + L        GYY LLSN+YAE   
Sbjct: 701 LIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAER 760

Query: 717 WDEFGKVRSIMEVTGLKKVPGYS 739
           WDE  KVR +M+  G KK PG S
Sbjct: 761 WDEANKVRELMKSRGAKKNPGCS 783


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/734 (30%), Positives = 409/734 (55%), Gaps = 2/734 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL    R+H H+  + +  D      LI  YA+ G+  S++ +FD   + D + W +L+ 
Sbjct: 119 NLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLG 178

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y+ +  +EE+  L+ +M+++      + +  +L AC+   ++  G ++   I+  G+D 
Sbjct: 179 GYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDT 238

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  + T+++  + + G +DDA KVF+ +  RD+++W+S+I     +    +   +F  M 
Sbjct: 239 DLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVME 298

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            EGV+PD V  +SL +AC    +L   + +H  +    +  +  +G + + MY+KCG + 
Sbjct: 299 EEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSME 358

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F  ++ R   SWTAMI+ + + G  ++A   F KM+E   EPN +T +++LG+C+
Sbjct: 359 DALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACS 418

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               L++G+ +H +II+ G   + D +  AL+  YA+CG + +   V   I ++N+++WN
Sbjct: 419 RPSALKQGRQIHDRIIKAGYITD-DRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWN 477

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I+ Y +      A+     +   G+ PDS +  S L+ C +  +L+LG  +   +I+ 
Sbjct: 478 AMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA 537

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
             + D  ++++L+ M+  CG    A  LF  + ++ +V WN++I GF Q+G +  A + F
Sbjct: 538 GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYF 597

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M  + ++ D++TF   + AC++   L +G+ +H  +    +  D+ + T L  MY KC
Sbjct: 598 KMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKC 657

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G +  A  VF ++ ++NV SW++MI  Y  HG+  +A  LF QM   G+KP+ +TF+  L
Sbjct: 658 GSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGAL 717

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+H+G ++EG  +F +M+ F +EP ++HY CMVDL  R+G +  A + I+ M    + 
Sbjct: 718 SACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDS 777

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            +WGALL  C++H  +++ + + ++      ND+G Y +LSNIYA  G W E  K+R +M
Sbjct: 778 RLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVM 837

Query: 728 EVTGLKKVPGYSTI 741
              G+ K PG S I
Sbjct: 838 LDRGVVKKPGQSWI 851



 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 178/606 (29%), Positives = 316/606 (52%), Gaps = 3/606 (0%)

Query: 78  ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
           E++L+   +      I    Y S+L+ C    +LG GE++H  I       D  +   ++
Sbjct: 87  EAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLI 146

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
             Y + G  + A+++FD+M  +DV SW+ ++  Y  +    E  ++   MV++GV+PD  
Sbjct: 147 SMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKY 206

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T + +  AC +  ++     +   +L      D  +G + I M+ KCG +  A + F  +
Sbjct: 207 TFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL 266

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +R   +WT+MI+   R   F++A   F  M E   +P+ +  +++L +C     L +GK
Sbjct: 267 PRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGK 326

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            VH ++   G+  E  Y+G AL+  Y +CG M +  +V + +  RN++SW  +I+ +A+ 
Sbjct: 327 RVHARMKEVGLDTEI-YVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQ 436
           G  +EA     +M   G+ P+  +  S L AC    +L+ G QIH  +IK     D+ V+
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           ++L+ MY+KCG    A  +FERI +++VV WN+MI  + Q+     A+  F  +    ++
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D  TF + +  C +   LE GKWV   +I  G   D++I  AL  M+  CGDL +A  +
Sbjct: 506 PDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNL 565

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           F+ M ER++VSW+ +I  +  HG+   A   FK M +SG+KP+++TF  +L AC+   ++
Sbjct: 566 FNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEAL 625

Query: 617 EEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            EG+     +    ++ D+     ++ + ++ G I+ A  + H++P   N   W +++ G
Sbjct: 626 TEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITG 684

Query: 677 CRIHKR 682
              H R
Sbjct: 685 YAQHGR 690



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 264/487 (54%), Gaps = 2/487 (0%)

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           +SE + +  S+    ++    T  SL + C +  +L     IH H+   KI+ D  + N 
Sbjct: 85  LSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNM 144

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY+KCG+  SA++ F ++  +   SW  ++  Y +   +++A     +M++   +P+
Sbjct: 145 LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPD 204

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T + +L +CA    + +G  +   I+  G   +  ++G ALI  + +CG + +  KV 
Sbjct: 205 KYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDL-FVGTALINMHIKCGGVDDALKVF 263

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           + +  R++++W  +I+  AR    K+A  L   M+  G+ PD  +  S L AC +  +L+
Sbjct: 264 NNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALE 323

Query: 417 LGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G ++H  + ++    E +V ++L+ MY+KCG    A  +F  ++ ++VV W +MI GF 
Sbjct: 324 QGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFA 383

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           Q+G   EA   F++M  + +E + VTF++ + ACS    L++G+ +H ++I  G   D  
Sbjct: 384 QHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR 443

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + TAL  MYAKCG L  A+ VF+ +S++NVV+W+AMI  Y  H + ++A + F+ +L  G
Sbjct: 444 VRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEG 503

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           IKP+  TF +IL  C    ++E GK+  + +   G E DL     +V +    GD+  A 
Sbjct: 504 IKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAM 563

Query: 656 KMIHSMP 662
            + + MP
Sbjct: 564 NLFNDMP 570



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 179/325 (55%), Gaps = 4/325 (1%)

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           +N    N  ++  ++ G   EA+ +L+ + +  +     + +S L  C    +L  G +I
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126

Query: 422 HGHV--IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           H H+   KI   D F+ + LI MY+KCG  N A  +F+ +  K V  WN ++ G+ Q+  
Sbjct: 127 HNHIKFSKIQ-PDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRR 185

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             EA  L  QM  + ++ D+ TF+  + AC++   ++KG  +   +++ G   D+++ TA
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA 245

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L +M+ KCG +  A +VF+++  R++++W++MI     H Q   A +LF+ M + G++P+
Sbjct: 246 LINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPD 305

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           +V F+++L AC+H  ++E+GK     M+  G++ ++     ++ + ++ G +E A + + 
Sbjct: 306 KVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE-VF 364

Query: 660 SMPFPANGSIWGALLNGCRIHKRID 684
           ++    N   W A++ G   H R++
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRME 389



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 129/240 (53%), Gaps = 5/240 (2%)

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E +  K+    N+ +    + G   EA+ +   +    +++   T+ + +Q C     L 
Sbjct: 62  EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLG 121

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            G+ +H+ +    ++ DI++   L  MYAKCG+  +A+++FD M +++V SW+ ++  Y 
Sbjct: 122 DGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYV 181

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            H +  +A  L +QM+  G+KP++ TF+ +L AC+ + +V++G   F+ +   G + DL 
Sbjct: 182 QHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLF 241

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI----DVMKTIEKE 692
               ++++  + G ++ A K+ +++P   +   W +++ G   H++     ++ + +E+E
Sbjct: 242 VGTALINMHIKCGGVDDALKVFNNLP-RRDLITWTSMITGLARHRQFKQACNLFQVMEEE 300


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/705 (34%), Positives = 389/705 (55%), Gaps = 3/705 (0%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y   GSL+ ++ +F T +   +  W  +I+ +     F  ++L Y KM+    +   + +
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
           P V++AC  L  +  G+ VH  +   G  +D  + +S++  Y E G L DA+ +FD +  
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           +D V W+ ++  Y  N D    +K+F  M    ++P+ VT   +   C     L     +
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG  +   +++D P+ N+ + MYSKC  L +A + F  + +    SW  +IS Y ++G  
Sbjct: 182 HGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLM 241

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
            +A   F  M+    +P+ IT  + L     L  L+  K +H  IIR  +  +  +L  A
Sbjct: 242 GEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV-FLKSA 300

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI+ Y +C  +   +K +      + +    +IS Y   G +KEALE    +    + P 
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFE 457
           S + +S   A   + +L LG ++HG +IK    ++  V S+++DMY+KCG  +LA  +F 
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           RI +K  + WNSMI    QNG   EAINLF QM +     D V+   A+ AC+N+  L  
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  +I   +R D+Y +++L DMYAKCG+L  ++RVFD M E+N VSW+++I  YG 
Sbjct: 481 GKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGN 540

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG L +  +LF +ML +GI+P+ VTF+ I+ AC H+G V+EG  Y++ M   +G+   ++
Sbjct: 541 HGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARME 600

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYAC+ D+  R+G +  AF+ I+SMPFP +  +WG LL  C IH  +++ +   K L   
Sbjct: 601 HYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDL 660

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              ++GYY LL+N+ A  G W +  KVRSIM+  G++KVPGYS I
Sbjct: 661 DPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWI 705



 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 323/597 (54%), Gaps = 7/597 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L+ +     +H  + + GL  D    + LI+ YAE G L  ++ +FD   + D
Sbjct: 64  VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKD 123

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S +W V++  Y+ N     +I ++ +M   +   ++  +  VL  C+S   L  G ++HG
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             + CG + D  +  ++L  Y +  CL  ARK+FD +   D+VSW+ II+ Y  N  + E
Sbjct: 184 IAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGE 243

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              +F  M+  G++PD +T  S      EL SL+  + IHG+++R  + +D  L ++ I 
Sbjct: 244 AEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALID 303

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC D+  A++   +     T   T MIS Y  +G  ++ALE+F  +++ + +P  +T
Sbjct: 304 IYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVT 363

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++  + AGL  L  GK +H  II+  +  E  ++G A+++ YA+CG++    +V + I
Sbjct: 364 FSSIFPAFAGLAALNLGKELHGSIIKTKL-DEKCHVGSAILDMYAKCGRLDLACRVFNRI 422

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++ + WN +I+  ++ G   EA+ L  QM   G   D  S++ +LSAC N+ +L  G 
Sbjct: 423 TEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGK 482

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           +IHG +IK   + D + +SSLIDMY+KCG  N +  +F+R+Q+K+ V WNS+I  +  +G
Sbjct: 483 EIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHG 542

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
           +  E + LFH+M  N ++ D VTFL  I AC + GQ+++G ++ H     YG+   +   
Sbjct: 543 DLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHY 602

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             + DM+ + G L  A    +SM    +   W  ++    +HG +  A    K + D
Sbjct: 603 ACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFD 659



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 241/462 (52%), Gaps = 7/462 (1%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY + G L  A+  F  ++  CT++W  MI  +   G F  AL  ++KML     P+  T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              V+ +C GL  ++ GK VH  +   G+  E  ++G +LI+ YAE G +S+ + +   I
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGL-KEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +++ + WN++++ Y + G S  A+++ ++M+   + P+S + A  LS C +   L LG 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 420 QIHGHVIKIDCK---DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           Q+HG  I + C    D  V ++L+ MYSKC     A  LF+ + Q  +V WN +I G+ Q
Sbjct: 180 QLHG--IAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG   EA +LF  M    ++ D +TF + +   + +  L+  K +H  +I + V  D+++
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +AL D+Y KC D++ AQ+     S  + V  + MI  Y ++G+  +A   F+ ++   +
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           KP  VTF +I  A +   ++  GK    ++    ++      + ++D+ ++ G ++ A +
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
           + + +    +   W +++  C  + R      + +++ + GT
Sbjct: 418 VFNRIT-EKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 108/207 (52%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P F     L     LH  ++ T L       + +++ YA+ G L  +  VF+   E D+ 
Sbjct: 369 PAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAI 428

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I     N    E+I L+ +M  E            L AC++L  L  G+++HG +
Sbjct: 429 CWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLM 488

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK     D   ++S++  Y + G L+ +R+VFD+M  ++ VSW+SII++Y ++ D+ E L
Sbjct: 489 IKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECL 548

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGE 208
            +FH M+R G++PD VT L +  ACG 
Sbjct: 549 ALFHEMLRNGIQPDHVTFLGIISACGH 575


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/740 (33%), Positives = 393/740 (53%), Gaps = 3/740 (0%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F + + L +  R+H   +  GL+ D    T L+      G + S++  F    + D  ++
Sbjct: 239 FTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVY 298

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             LI     +    E+   Y++M  +   ++   Y S+L ACS+   L +G+ +H  I +
Sbjct: 299 NALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISE 358

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G   D  I  +++  Y   G L  AR++F  M  RD++SW++IIA Y    D  E +++
Sbjct: 359 DGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRL 418

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           +  M  EGV+P  VT L L  AC    +    + IH  +LR  IK +G L N+ + MY +
Sbjct: 419 YKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRR 478

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG L+ A+  F   + R   SW +MI+ + + G ++ A + F +M   + EP+ IT  +V
Sbjct: 479 CGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASV 538

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L  C     L  GK +H +I   G+  + + LG ALI  Y  CG + +   V H++  R+
Sbjct: 539 LSGCKNPEALELGKQIHGRITESGLQLDVN-LGNALINMYIRCGSLQDARNVFHSLQHRD 597

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SW  +I   A +G   +A+EL  QMQ  G  P   + +S L  C +   L  G ++  
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIA 657

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +++    + D  V ++LI  YSK G    A  +F+++  + +V WN +I G+ QNG    
Sbjct: 658 YILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQT 717

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A+   +QM    +  ++ +F++ + ACS+   LE+GK VH +++   ++ D+ +  AL  
Sbjct: 718 AVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALIS 777

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MYAKCG    AQ VFD++ E+NVV+W+AMI+ Y  HG  + A   F  M   GIKP+  T
Sbjct: 778 MYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGST 837

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F +IL AC+H+G V EG   F++M   +GV P ++HY C+V LL R+   + A  +I+ M
Sbjct: 838 FTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQM 897

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           PFP + ++W  LL  CRIH  I + +            +   Y LLSN+YA  G WD+  
Sbjct: 898 PFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVA 957

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           K+R +ME  G++K PG S I
Sbjct: 958 KIRRVMEGRGIRKEPGRSWI 977



 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 214/666 (32%), Positives = 344/666 (51%), Gaps = 5/666 (0%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L ++CT  R L    R+HA ++   +  D   S  LI  Y +  S+  +  VF     
Sbjct: 31  VALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR 90

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W  LI CY    F +++  L+ +M       +   Y S+L AC S  +L +G+K+
Sbjct: 91  RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKI 150

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H +IIK G+ +D  +Q S+L  YG+ G L  AR+VF  ++ RDVVS+++++  Y   A V
Sbjct: 151 HSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYV 210

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L +F  M  EG+ PD VT ++L +A      L   + IH   +   +  D  +G + 
Sbjct: 211 KECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTAL 270

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + M  +CGD+ SA++ F     R    + A+I+   + G   +A E + +M       N 
Sbjct: 271 VTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNR 330

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T +++L +C+    L  GK +H  I   G   +   +G ALI  YA CG + +  ++ +
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ-IGNALISMYARCGDLPKARELFY 389

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +R+++SWN +I+ YAR+    EA+ L  QMQ+ G+ P   +    LSAC N  +   
Sbjct: 390 TMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449

Query: 418 GLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G  IH  +++   K    + ++L++MY +CG    A  +FE  Q + V+ WNSMI G  Q
Sbjct: 450 GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ 509

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G+   A  LF +M    LE D +TF + +  C N   LE GK +H ++   G++ D+ +
Sbjct: 510 HGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNL 569

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             AL +MY +CG LQ A+ VF S+  R+V+SW+AMI      G+   A  LF QM + G 
Sbjct: 570 GNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           +P + TF +IL  C+ S  ++EGK     +   G E D      ++   S+SG +  A +
Sbjct: 630 RPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDARE 689

Query: 657 MIHSMP 662
           +   MP
Sbjct: 690 VFDKMP 695



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 163/594 (27%), Positives = 305/594 (51%), Gaps = 5/594 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L+ C+    L   +++H ++++     D  +   ++  Y +   + DA +VF +M 
Sbjct: 30  YVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP 89

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDV+SW+S+I+ Y       +  ++F  M   G  P+ +T +S+  AC     L   + 
Sbjct: 90  RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKK 149

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  +++   + D  + NS + MY KCGDL  A + F  I  R   S+  M+  Y +  +
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAY 209

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            ++ L  F +M      P+ +T I +L +      L EGK +H   + +G+  +   +G 
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI-RVGT 268

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL+     CG +   ++      +R+++ +N LI+  A+ G + EA E   +M++ G+  
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  +  S L+AC    +L+ G  IH H+ +     D  + ++LI MY++CG    A  LF
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             + ++ ++ WN++I G+ +  +  EA+ L+ QM    ++   VTFL  + AC+N     
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK +H  ++  G++ + ++  AL +MY +CG L  AQ VF+    R+V+SW++MI  + 
Sbjct: 449 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHA 508

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            HG    A  LF++M +  ++P+ +TF ++L  C +  ++E GK     +   G++ D+ 
Sbjct: 509 QHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVN 568

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
               ++++  R G ++ A  + HS+      S W A++ GC    + + MK IE
Sbjct: 569 LGNALINMYIRCGSLQDARNVFHSLQHRDVMS-WTAMIGGCA--DQGEDMKAIE 619



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 244/461 (52%), Gaps = 2/461 (0%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            E +  T ++L + C     L  A+ IH  ++   +  D  L N  I MY KC  +L A 
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F ++ +R   SW ++ISCY + G+ +KA + F +M      PN IT I++L +C    
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  GK +H QII+ G   +   +  +L+  Y +CG +    +V   I  R+++S+N ++
Sbjct: 143 ELENGKKIHSQIIKAGYQRD-PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA+K   KE L L  QM + G+ PD  +  + L A      L  G +IH   ++    
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            +  V ++L+ M  +CG  + A   F+    + VV++N++I    Q+G+++EA   +++M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
             + + ++  T+L+ + ACS    LE GK +H  +   G   D+ I  AL  MYA+CGDL
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ +F +M +R+++SW+A+I  Y       +A  L+KQM   G+KP  VTF+++L AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           ++S +  +GK     +   G++ +      ++++  R G +
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSL 482



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 88/162 (54%)

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           E +  T++  +Q C+    L + K +H +++   V  DI++   L +MY KC  +  A +
Sbjct: 24  ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VF  M  R+V+SW+++I CY   G    A  LF++M ++G  PN++T+++IL AC     
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           +E GK   + +   G + D +    ++ +  + GD+  A ++
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 12/147 (8%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C++   L    R+HA ++   L  D      LI  YA+ GS   ++ VFD   E +
Sbjct: 740 LLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKN 799

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +    +++  ++ M +E        + S+L AC+  G +  G ++  
Sbjct: 800 VVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFS 859

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCL 146
            +           +  +L T   +GCL
Sbjct: 860 SMES---------EYGVLPTIEHYGCL 877


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/749 (33%), Positives = 417/749 (55%), Gaps = 16/749 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C  L  L     +H HLL TG   +      LI+ Y   G +  +R  F  F    
Sbjct: 48  LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107

Query: 60  SFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   +  ++  Y  N  +  ++ LYH+M  E        Y  VL +CS++G L    ++H
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167

Query: 119 GRIIKC-GFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
             II+     +D++ +Q +++  YG+ G +++ARKVFD + +RD VSW+S+I+SY +N  
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E L ++  M  +G++PD +T  S   AC +L      ++IH  ++   ++ D  +G++
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESD-FVGSA 283

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY++CGD+ SA + F KI+ +    WT++++ Y ++  +++AL+ + +M       +
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T +T LG+CA LG L+EGK++H ++   G   +   +  AL+  YA+CG++     V 
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFECGF--QSLVVHTALLTMYAKCGELDAARAVF 401

Query: 357 HAIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
           + + + RN+  W  +IS YA+ G ++EALEL  QM   G  P+ ++ ++ L+AC + G L
Sbjct: 402 NRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDL 461

Query: 416 QLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G++IHGHV   +      VQ++L+ MY+KCG   LA   FE   +K +V WN+MI  +
Sbjct: 462 EAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAY 521

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKD 533
            Q+G   EA++L+  M    +  DEVT  +++ AC+  G L+ G+ +H +++ +   R  
Sbjct: 522 AQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSS 581

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + + TAL +MY +CG L+TA+ +F+ M +R+V+SW+AM   Y   G  +    L+ +M+ 
Sbjct: 582 LMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVL 641

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIE 652
            GI+PNE+TF +IL  CSH+G +  G   F  M+    V P  +H+ CMVDLL RSG + 
Sbjct: 642 HGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLR 701

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A  ++ SMP+  +   W  +L  C+ H   D  K   + +      +   Y+LLS+I+ 
Sbjct: 702 DAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFT 761

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G   E  +V+  M+  GLKK PG S I
Sbjct: 762 AAGLPQEALEVQLSMKEMGLKKPPGQSLI 790



 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 179/570 (31%), Positives = 307/570 (53%), Gaps = 10/570 (1%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           +Y  +L+ C  LG L  G+ VH  +++ G  ++  +   ++  YG  G +  AR  F   
Sbjct: 44  LYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNF 103

Query: 157 TS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
            S + V  ++ ++++Y  N   +  L+++H M  EG EPD +T   +  +C  + SLR A
Sbjct: 104 ASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREA 163

Query: 216 RSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           R IH  ++   + I+ +  L N+ + MY KCG +  A + F  I+ R   SWT+MIS Y 
Sbjct: 164 REIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYA 223

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
            +G+  +AL+ + +M     +P+ IT  + L +C  L    +GK++H +I+   M  E D
Sbjct: 224 NNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKL---VDGKAIHARIVSSNM--ESD 278

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++G ALI  YA CG +S   +    I  ++++ W  L++ Y +    +EAL+L  +M   
Sbjct: 279 FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHE 338

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
           G+  D  +  ++L AC ++G+L+ G  IH  V +   +   V ++L+ MY+KCG  + A 
Sbjct: 339 GVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAAR 398

Query: 454 LLFERIQQK-SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
            +F R++QK +V  W +MI  + Q G++ EA+ L+ QM       +E TF   + ACS+ 
Sbjct: 399 AVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSS 458

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G LE G  +H  + +  +  ++ +  AL  MYAKCG L+ A+  F++   +++VSW+AMI
Sbjct: 459 GDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMI 518

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGV 631
             Y  HG   +A  L++ M   G+ P+EVT  + L AC+ SGS++ G+  +   ++    
Sbjct: 519 GAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSF 578

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
              L     +V++  R G +E A  M   M
Sbjct: 579 RSSLMVQTALVNMYGRCGRLETARSMFEDM 608


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/649 (36%), Positives = 379/649 (58%), Gaps = 4/649 (0%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           + +  +P VL+AC+    +  G ++HG + K GFD D  +  ++L  YG  G L D ++V
Sbjct: 5   LDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRV 64

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCS 211
           FD+M  RDVVSW+S+I  +  +   +E + +F  M +R G  P+ V+++S+   C  L  
Sbjct: 65  FDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLED 124

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
               R IH +V++  +     +GN+ + +Y KCG +  + R F +I +R   SW A+I+ 
Sbjct: 125 GVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITS 184

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
                  Q ALE F  M++   +PN +T  ++L     L     GK +H   +R G+  +
Sbjct: 185 LAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESD 244

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             ++  ALI+ YA+ G+  +   V + IGE+NI+SWN +++ +A+  +   A++L+ QMQ
Sbjct: 245 I-FVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQ 303

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKN 450
             G +P+S +  + L AC  +G L+ G +IH   I+     D FV ++L DMY+KCG  N
Sbjct: 304 ADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLN 363

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           LA  +F +I  +  V +N +I G+ Q  N  E++ LF +M +  +++D V+++  I AC+
Sbjct: 364 LARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACA 422

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           N+  L++GK VH   +   +   ++I  AL D Y KCG +  A +VF  +  R+  SW++
Sbjct: 423 NLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNS 482

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           MI  YGM G+L  A +LF+ M + G++ + V+++ +L ACSH G VEEGK YF  M++  
Sbjct: 483 MILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQN 542

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           ++P   HYACMVDLL R+G IE A K+I S+P   + ++WGALL  CRIH  I++     
Sbjct: 543 IKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAA 602

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + L       +GYY++LSN+YAE G WDE  +VR +M+  G KK PG S
Sbjct: 603 EHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCS 651



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/488 (31%), Positives = 265/488 (54%), Gaps = 5/488 (1%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           GV  D  T   + +AC +  S++  R IHG V +     D  +GN+ ++ Y  CG L   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAG 309
           +R F ++ +R   SW ++I  ++  G++ +A+  F +M L     PN++++++VL  CAG
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L     G+ +HC +++ G+  +   +G AL++ Y +CG + +  +V   I ERN +SWN 
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVT-VGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I+  A    +++ALE+   M   G+ P+S + +S L     +     G +IHG  ++  
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240

Query: 430 CK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            + D FV ++LIDMY+K G    A  +F +I +K++V WN+M+  F QN   L A++L  
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVR 300

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           QM  +    + VTF   + AC+ IG L  GK +H + I  G   D+++  ALTDMYAKCG
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG 360

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  A+RVF  +S R+ VS++ +I  Y      +++  LF +M   G+K + V++M ++ 
Sbjct: 361 CLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVIS 419

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           AC++  ++++GK          +   L     ++D   + G I+ A K+   +P     S
Sbjct: 420 ACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTAS 479

Query: 669 IWGALLNG 676
            W +++ G
Sbjct: 480 -WNSMILG 486



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 249/550 (45%), Gaps = 38/550 (6%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H +++ TGL         L++ Y + G ++ SR VFD   E +   W  +I    +  
Sbjct: 130 QIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLE 189

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             ++++ ++  MI      ++  + S+L     L     G+++HG  ++ G + D  +  
Sbjct: 190 RNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVAN 249

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G    A  VF+++  +++VSW++++A++  N      + +   M  +G  P
Sbjct: 250 ALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIP 309

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + VT  ++  AC  +  LRP + IH   +R    +D  + N+   MY+KCG L  A R F
Sbjct: 310 NSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF 369

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            KI  R   S+  +I  Y+++    ++L  F++M     + ++++ + V+ +CA L  L+
Sbjct: 370 -KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALK 428

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +GK VH   +RK +     ++  AL++FY +CG++    KV   I  R+  SWN +I  Y
Sbjct: 429 QGKEVHGLAVRKHLHTHL-FIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGY 487

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
              G    A+ L   M+  G+  DS S  + LSAC + G ++ G +   H+   + K  +
Sbjct: 488 GMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQ 547

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
              + ++D+  + G    A  L E +                                  
Sbjct: 548 MHYACMVDLLGRAGLIEEAVKLIESLP--------------------------------- 574

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +E D   +   + AC   G +E   W    L     +   Y  + L++MYA+ G    A
Sbjct: 575 -IEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYY-SVLSNMYAEAGKWDEA 632

Query: 554 QRVFDSMSER 563
            +V   M  R
Sbjct: 633 NQVRKLMKSR 642



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 39/347 (11%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR    +HA  + TG   D   S  L + YA+ G L  +R VF      D   + +LI  
Sbjct: 327 LRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIG 385

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y       ES+ L+ +M  +   +    Y  V+ AC++L  L  G++VHG  ++      
Sbjct: 386 YSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTH 445

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             I  ++L  Y + G +D A KVF ++ SRD  SW+S+I  Y    +++  + +F +M  
Sbjct: 446 LFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKE 505

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +GVE D V+ +++  AC            HG ++          G  +            
Sbjct: 506 DGVEYDSVSYIAVLSACS-----------HGGLVEE--------GKKYF----------- 535

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-VKEEPNLITLITVLGSCA 308
            E   V+  K     +  M+    R+G  ++A    VK++E +  EP+      +LG+C 
Sbjct: 536 -EHMQVQNIKPTQMHYACMVDLLGRAGLIEEA----VKLIESLPIEPDANVWGALLGACR 590

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
             G++         + +  + P++      L   YAE GK  E  +V
Sbjct: 591 IHGYIELAHWAAEHLFK--LKPQHSGYYSVLSNMYAEAGKWDEANQV 635


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/715 (34%), Positives = 406/715 (56%), Gaps = 7/715 (0%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQA 91
           TRL+  Y+   S   S LVF+  +  + F+W  L+  Y+ N+ F +++ ++ +MI   + 
Sbjct: 133 TRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEF 192

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
              NF  P V++AC  + D+  GE VHG  +K     D  +  +++  YG+FG ++ A K
Sbjct: 193 VPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVK 252

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR--EGVEPDFVTMLSLAEACGEL 209
           VFDKM  R++VSW+S++ +  +N    E   +F  ++   EG+ PD  TM+++   C   
Sbjct: 253 VFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQ 312

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
             +R     HG  L+  +  +  + +S + MYSKCG L  A   F   EK    SW +MI
Sbjct: 313 GEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKN-VISWNSMI 371

Query: 270 SCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
             Y++   F+ A E   KM +E K + N +TL+ VL  C       + K +H   +R G 
Sbjct: 372 GGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGF 431

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
               + +  A +  YA+CG +   E V   +  + + SWN LI  + + G  ++AL+L +
Sbjct: 432 IQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYL 491

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG 447
            M+  GL PD F++AS LSAC  + SL  G +IHG +++   + DEF+  SL+ +Y +CG
Sbjct: 492 LMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCG 551

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
              LA L F+ +++K++V WN+MI GF QN    +A+++FHQM  + +  DE++ + A+ 
Sbjct: 552 KILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALG 611

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           ACS +  L  GK +H   +   + +  ++  +L DMYAKCG ++ +Q +FD +  +  V+
Sbjct: 612 ACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT 671

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+ +I  YG+HG    A  LFK M ++G +P+ VTF+ +L AC+H+G V EG  Y   M+
Sbjct: 672 WNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQ 731

Query: 628 -IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
            +FG++P L+HYAC+VD+L R+G +  A ++++ +P   +  IW +LL+ CR ++ +D+ 
Sbjct: 732 SLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIG 791

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +  +L   G +    Y L+SN YA  G WDE  K+R  M+  GL+K  G S I
Sbjct: 792 EKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWI 846



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 161/587 (27%), Positives = 302/587 (51%), Gaps = 9/587 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   L T +  D      LI  Y + G + S+  VFD   + +   W  ++   + N  
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277

Query: 76  FEESILLYHKMIREQATISNFIYP--SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
           FEES  L+  ++     +   +    +V+  C+  G++  G   HG  +K G   +  + 
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGV 192
           +S+L  Y + G L +AR +FD    ++V+SW+S+I  Y  + D     ++   M + + V
Sbjct: 338 SSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAE 251
           + + VT+L++   C E       + IHG+ LR   I+ D  + N+F+  Y+KCG L  AE
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  +E +  +SW A+I  + ++G+ +KAL+ ++ M     EP+L T+ ++L +CA L 
Sbjct: 457 GVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLK 516

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  GK +H  ++R G   + +++  +L+  Y +CGK+   +     + E+N++ WN +I
Sbjct: 517 SLSCGKEIHGSMLRNGFELD-EFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMI 575

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           + +++     +AL++  QM +  + PD  S+  +L AC  V +L+LG ++H   +K    
Sbjct: 576 NGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLT 635

Query: 432 DE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           +  FV  SLIDMY+KCG    +  +F+R+  K  V WN +I G+  +G+  +AI LF  M
Sbjct: 636 EHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSM 695

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
                  D VTF+  + AC++ G + +G +++      +G++  +     + DM  + G 
Sbjct: 696 QNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGR 755

Query: 550 LQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           L  A  + + + ++ +   WS+++     +  L+    +  ++L+ G
Sbjct: 756 LNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELG 802



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/605 (26%), Positives = 306/605 (50%), Gaps = 22/605 (3%)

Query: 101 VLRACSSLGDLGSGEKVHGRI-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           +L+ C    ++  G K+H  I     F  D V+ T ++  Y       D+  VF+    +
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSI 218
           ++  W+++++ Y  N+   + + +F  M+      PD  T+  + +AC  +  +R   ++
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG  L+ K+  D  +GN+ I MY K G + SA + F K+ +R   SW +++     +G F
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 279 QKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           +++   F  +L   E   P++ T++TV+  CA  G +R G   H   ++ G+  E   + 
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELK-VN 337

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +L++ Y++CG + E  +V+    E+N++SWN +I  Y++    + A ELL +MQ    +
Sbjct: 338 SSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396

Query: 397 P-DSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAY 453
             +  ++ + L  C          +IHG+ ++      DE V ++ +  Y+KCG  + A 
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F  ++ K V  WN++I G  QNG   +A++L+  M  + LE D  T  + + AC+ + 
Sbjct: 457 GVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLK 516

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  GK +H  ++  G   D +I  +L  +Y +CG +  A+  FD+M E+N+V W+ MI+
Sbjct: 517 SLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMIN 576

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            +  +    DA  +F QML S I P+E++ +  L ACS   ++  GK     +  F V+ 
Sbjct: 577 GFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGK----ELHCFAVKS 632

Query: 634 DLQHYA----CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRIDV 685
            L  ++     ++D+ ++ G +E +  +   +      + W  L+ G  IH    K I++
Sbjct: 633 HLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT-WNVLITGYGIHGHGRKAIEL 691

Query: 686 MKTIE 690
            K+++
Sbjct: 692 FKSMQ 696



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 205/450 (45%), Gaps = 39/450 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +P+        KL  +H + L  G +  D   +   +  YA+ GSL  +  VF   +   
Sbjct: 407 LPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKM 466

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  ++ N F  +++ LY  M         F   S+L AC+ L  L  G+++HG
Sbjct: 467 VSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHG 526

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +++ GF+ D+ I  S++  Y + G +  A+  FD M  +++V W+++I  +  N    +
Sbjct: 527 SMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFD 586

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L MFH M+   + PD ++++    AC ++ +LR  + +H   ++  +     +  S I 
Sbjct: 587 ALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLID 646

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  ++  F ++  +   +W  +I+ Y   G  +KA+E F  M      P+ +T
Sbjct: 647 MYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVT 706

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            I +L +C   G + EG                +YLG  +   +    K+     V+  +
Sbjct: 707 FIALLTACNHAGLVAEG---------------LEYLG-QMQSLFGIKPKLEHYACVVDML 750

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G               R G   EALEL+ ++      PDS   +S LS+C N   L +G 
Sbjct: 751 G---------------RAGRLNEALELVNELPD---KPDSRIWSSLLSSCRNYRDLDIGE 792

Query: 420 QIHGHVIKI--DCKDEFVQSSLIDMYSKCG 447
           ++   ++++  D  + +V  S  + Y++ G
Sbjct: 793 KVANKLLELGPDKAENYVLIS--NFYARLG 820


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/752 (32%), Positives = 410/752 (54%), Gaps = 14/752 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGL---HYDPPASTRLIESYAEMGSLRSSRLVFDT 54
           + + R C +   L    ++HA  +V+G    H      TRL+  Y      R +  VF  
Sbjct: 36  LAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSA 95

Query: 55  FKEP---DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY--PSVLRACSSLG 109
                   S  W  LI+ +        ++L Y KM    A  S   +  P V+++C++LG
Sbjct: 96  LPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALG 155

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
            +  G  VH      G   D  + ++++  Y + G L +AR  FD +  RD V W+ ++ 
Sbjct: 156 AMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMD 215

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
                 DV   +++F +M   G EP+F T+      C     L     +H   ++  ++ 
Sbjct: 216 GCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEP 275

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           +  + N+ + MY+KC  L  A R F  + +    +W  MIS   ++G F +A   F  M 
Sbjct: 276 EVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQ 335

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
                P+ ITL+++L +   L  L++GK VH  I+R  +  +  +L  AL++ Y +C  +
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDV-FLVSALVDIYFKCRDV 394

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
              + +  A    +++  + +IS Y   GMS+EAL++   +    + P++ ++AS L  C
Sbjct: 395 RMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGC 454

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            ++ +L LG QIHG+V++   + + +V+S+L+DMY+KCG  +L++ +F ++ QK  V WN
Sbjct: 455 ASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWN 514

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           SMI  F QNG   EA++LF QM +  ++ + +T   A+ AC+++  +  GK +H   I  
Sbjct: 515 SMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKG 574

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            ++ DI+ ++AL DMYAKCG+L+ A RVF+ M ++N VSW+++I  YG HG + ++ SL 
Sbjct: 575 PIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLL 634

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSR 647
             M + G KP+ VTF+ ++ AC+H+G VEEG   F  M + + + P ++H+ACMVDL SR
Sbjct: 635 HGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSR 694

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
           SG ++ A + I  MPF  +  IWGALL+ CR+H+ +++     +EL      ++GYY L+
Sbjct: 695 SGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLM 754

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           SNI A  G WD   KVR +M+   + K+PGYS
Sbjct: 755 SNINAVAGRWDGVSKVRRLMKDNKILKIPGYS 786


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/779 (32%), Positives = 419/779 (53%), Gaps = 77/779 (9%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           R   NLR   ++HA L+V G+       +RL+E Y + G +  +R +FD   E + F W 
Sbjct: 100 RKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWT 159

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +++ Y     +EE+I L++ M+ E     +F++P V +ACS L +   G+ V+  ++  
Sbjct: 160 AIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI 219

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ +  ++ SIL  + + G +D AR+ F+++  +DV  W+ +++ Y    +  + LK  
Sbjct: 220 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCI 279

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M   GV+PD VT                                    N+ I  Y++ 
Sbjct: 280 SDMKLSGVKPDQVTW-----------------------------------NAIISGYAQS 304

Query: 245 GDLLSAERTFVKIE-----KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           G    A + F+++      K    SWTA+I+   ++G+  +AL  F KM+    +PN IT
Sbjct: 305 GQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSIT 364

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + + + +C  L  LR G+ +H   I+         +G +L+++YA+C  +    +    I
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 424

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQ---------TW----------------- 393
            + +++SWN +++ YA +G  +EA+ELL +M+         TW                 
Sbjct: 425 KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAAL 484

Query: 394 ---------GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
                    G+ P++ +++ +L+ACG V +L+LG +IHG+V++   +    V S+LI MY
Sbjct: 485 EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMY 544

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           S C    +A  +F  +  + VV+WNS+I    Q+G S+ A++L  +M L+ +E++ VT +
Sbjct: 545 SGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 604

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           +A+ ACS +  L +GK +H  +I  G+    +I  +L DMY +CG +Q ++R+FD M +R
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR 664

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           ++VSW+ MI  YGMHG   DA +LF+Q    G+KPN +TF N+L ACSHSG +EEG  YF
Sbjct: 665 DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYF 724

Query: 624 NAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
             M+  + ++P ++ YACMVDLLSR+G      + I  MPF  N ++WG+LL  CRIH  
Sbjct: 725 KMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCN 784

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            D+ +   + L       +G Y L++NIY+  G W++  K+R +M+  G+ K PG S I
Sbjct: 785 PDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 843



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 173/701 (24%), Positives = 309/701 (44%), Gaps = 117/701 (16%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F++C+   N R    ++ ++L  G   +      +++ + + G +  +R  F+  +  D
Sbjct: 196 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            FMW +++  Y                                   +S G+     K   
Sbjct: 256 VFMWNIMVSGY-----------------------------------TSKGEFKKALKCIS 280

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-----SRDVVSWSSIIASYFDN 174
            +   G   D V   +I+  Y + G  ++A K F +M        +VVSW+++IA    N
Sbjct: 281 DMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQN 340

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR-RKIKIDGPL 233
               E L +F  MV EGV+P+ +T+ S   AC  L  LR  R IHG+ ++  ++  D  +
Sbjct: 341 GYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLV 400

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA------------ 281
           GNS +  Y+KC  +  A R F  I++    SW AM++ Y   G  ++A            
Sbjct: 401 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGI 460

Query: 282 -----------------------LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
                                  LE F +M  +  +PN  T+   L +C  +  L+ GK 
Sbjct: 461 EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +H  ++R  +      +G ALI  Y+ C  +     V   +  R+++ WN +IS  A+ G
Sbjct: 521 IHGYVLRNHIELSTG-VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQS 437
            S  AL+LL +M    +  ++ ++ S+L AC  + +L+ G +IH  +I+       F+ +
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SLIDMY +CG    +  +F+ + Q+ +V WN MI  +  +G  ++A+NLF Q     L+ 
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKP 699

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           + +TF   + ACS+ G +E+G W + K++    + +  +D A                  
Sbjct: 700 NHITFTNLLSACSHSGLIEEG-WKYFKMM----KTEYAMDPA------------------ 736

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
                  V  ++ M+D     GQ N+     ++M     +PN   + ++L AC    + +
Sbjct: 737 -------VEQYACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGACRIHCNPD 786

Query: 618 EGKFYFNAMRIFGVEPDLQ-HYACMVDLLSRSGDIEGAFKM 657
             +  + A  +F +EP    +Y  M ++ S +G  E A K+
Sbjct: 787 LAE--YAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 126/264 (47%), Gaps = 12/264 (4%)

Query: 475 YQNGNSLEAINLFHQMYLN----CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           ++NG    A  L   M L     C+E+    + + +Q C  +  L  G  VH +L+  GV
Sbjct: 65  HRNGVLNNAAMLLSSMDLTNPDECIEI----YASILQKCRKLYNLRLGFQVHAQLVVNGV 120

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
               ++ + L ++Y + G ++ A+R+FD MSERNV SW+A+++ Y   G   +   LF  
Sbjct: 121 DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M++ G++P+   F  +  ACS   +   GK  ++ M   G E +      ++D+  + G 
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN-DNGYYTLLSN 709
           ++ A +    + F  +  +W  +++G               ++ ++G   D   +  + +
Sbjct: 241 MDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLK 733
            YA+ G ++E  K    +E+ GLK
Sbjct: 300 GYAQSGQFEEASKY--FLEMGGLK 321


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/738 (34%), Positives = 408/738 (55%), Gaps = 8/738 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-FMWA 64
           S     +L +LH+ ++  GLH+    S +LI  YA      SS  VF      ++ ++W 
Sbjct: 25  SAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWN 84

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I+    N  F E++ LY +  R +     + +PSV+ AC+ L D    + +H R++  
Sbjct: 85  SIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDM 144

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF  D  I  +++  Y  F  LD ARKVF++M  RDVVSW+S+I+ Y  N   +E L+++
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           +     GV PD  TM S+  ACG L S+     IHG + +  IK D  + N  + MY K 
Sbjct: 205 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 264

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
             L+   R F K+  R   SW  MI  Y++ G ++++++ F++M+  + +P+L+T+ ++L
Sbjct: 265 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSIL 323

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP-ALIEFYAECGKMSECEKVIHAIGERN 363
            +C  LG L  GK VH  +I  G   E D      LI  YA+CG +   ++V   +  ++
Sbjct: 324 QACGHLGDLEFGKYVHDYMITSGY--ECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 381

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            +SWN +I+ Y + G   EA++L   M+T  + PDS +    LS    +G L LG ++H 
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLGDLHLGKELHC 440

Query: 424 HVIKIDCKDEFVQS-SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            + K+      V S +L+DMY+KCG    +  +FE ++ + ++ WN++I     + +   
Sbjct: 441 DLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 500

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            + +  +M    +  D  T L+ +  CS +    +GK +H  +   G+  D+ +   L +
Sbjct: 501 GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIE 560

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG L+ + +VF  M  ++VV+W+A+I   GM+G+   A   F +M  +GI P+ V 
Sbjct: 561 MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 620

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+ I++ACSHSG VEEG  YF+ M+  + +EP ++HYAC+VDLLSRS  ++ A   I SM
Sbjct: 621 FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 680

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   + SIWGALL+ CR+    ++ + + + +     +D GYY L+SNIYA  G WD+  
Sbjct: 681 PLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVR 740

Query: 722 KVRSIMEVTGLKKVPGYS 739
            +R  ++  GLKK PG S
Sbjct: 741 SIRKSIKARGLKKDPGCS 758


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/730 (33%), Positives = 406/730 (55%), Gaps = 6/730 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHA LL +  H     +T+L+  Y + GSLR +  VFD   E   F W  L+  ++ + 
Sbjct: 67  QLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSG 124

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            + E+I LY  M      I    +PSVL+AC +LG+   G ++HG  +KCG+ +   +  
Sbjct: 125 KYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCN 184

Query: 135 SILCTYGEFGCLDDARKVFDK--MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           +++  YG+ G L  AR +FD   M   D VSW+SII+++    +  E L +F  M   GV
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGV 244

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
             +  T ++  +   +   ++    IHG VL+     D  + N+ I MY+KCG +  A R
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGR 304

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +  R   SW  ++S   ++  +  AL  F  M    ++P+ ++++ ++ +    G 
Sbjct: 305 VFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGN 364

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +GK VH   IR G+      +G  L++ YA+C  +         + E++++SW  +I+
Sbjct: 365 LLKGKEVHAYAIRNGLDSNMQ-IGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIA 423

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            YA+     EA+ L  ++Q  G+  D   + S L AC  + S     +IHG+V K D  D
Sbjct: 424 GYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD 483

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             +Q++++++Y + G  + A   FE I+ K +V W SMI     NG  +EA+ LF+ +  
Sbjct: 484 IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             ++ D +  ++A+ A +N+  L+KGK +H  LI  G   +  I ++L DMYA CG ++ 
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           ++++F S+ +R+++ W++MI+  GMHG  N A +LFK+M D  + P+ +TF+ +L+ACSH
Sbjct: 604 SRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSH 663

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           SG + EGK +F  M+  + +EP  +HYACMVDLLSRS  +E A+  + +MP   +  IW 
Sbjct: 664 SGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWC 723

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL  C IH   ++ +   KEL  + T ++G Y L+SNI+A +G W++  +VR  M+  G
Sbjct: 724 ALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNG 783

Query: 732 LKKVPGYSTI 741
           LKK PG S I
Sbjct: 784 LKKNPGCSWI 793



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 165/309 (53%), Gaps = 1/309 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL K   +HA+ +  GL  +      L++ YA+   ++     F+   E D   W  +I 
Sbjct: 364 NLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIA 423

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  N F  E+I L+ K+  +   +   +  SVLRACS L       ++HG + K     
Sbjct: 424 GYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-A 482

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D ++Q +I+  YGE G +D AR+ F+ + S+D+VSW+S+I     N    E L++F+S+ 
Sbjct: 483 DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           +  ++PD + ++S   A   L SL+  + IHG ++R+   ++GP+ +S + MY+ CG + 
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           ++ + F  +++R    WT+MI+     G   KA+  F KM +    P+ IT + +L +C+
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACS 662

Query: 309 GLGWLREGK 317
             G + EGK
Sbjct: 663 HSGLMVEGK 671


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/731 (33%), Positives = 411/731 (56%), Gaps = 6/731 (0%)

Query: 15  RLHAHLLVTGLH-YDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           ++HAH++V G H +D      L+ +Y++M     ++ +FDT    +   W+ ++  Y  +
Sbjct: 72  KIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQH 131

Query: 74  NFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
            +  E++LL+ + +R  +   N +I  SV+RAC+ LG+L    ++HG ++K GF +D  +
Sbjct: 132 GYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYV 191

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            TS++  Y + G +D+AR +FD +  +  V+W++IIA Y         LK+F+ M    V
Sbjct: 192 GTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDV 251

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            PD   + S+  AC  L  L   + IHG+VLRR   +D  + N  I  Y KC  + +  +
Sbjct: 252 YPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRK 311

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++  +   SWT MI+   ++ +   A++ FV+M+    +P+     +VL SC  L  
Sbjct: 312 LFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQA 371

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L++G+ VH   I+  +  + D++   LI+ YA+C  ++   KV   +   N++S+N +I 
Sbjct: 372 LQKGRQVHAYAIKVNIDND-DFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIE 430

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y+R+    EAL+L  +M+     P   +  S L    ++  L+L  QIH  +IK     
Sbjct: 431 GYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSL 490

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D F  S+LID+YSKC     A L+FE I  + +V+WN+M  G+ Q   + E++ L+  + 
Sbjct: 491 DSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQ 550

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           ++ L+ +E TF   I A SNI  L  G+  H+++I  G+  D ++  +L DMYAKCG ++
Sbjct: 551 MSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIE 610

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            + + F S ++R++  W++MI  Y  HG    A  +F++M+  G+KPN VTF+ +L ACS
Sbjct: 611 ESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACS 670

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           H+G ++ G  +F +M  FG+EP + HYACMV LL R+G I  A + +  MP      +W 
Sbjct: 671 HAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWR 730

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVT-GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           +LL+ CR+   ++ + T   E++++    D+G Y LLSNI+A +G W     VR  M+++
Sbjct: 731 SLLSACRVSGHVE-LGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMS 789

Query: 731 GLKKVPGYSTI 741
            + K PG+S I
Sbjct: 790 RVVKEPGWSWI 800



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 191/625 (30%), Positives = 323/625 (51%), Gaps = 47/625 (7%)

Query: 5   RSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           R+CT   NL +  +LH  ++  G   D    T LI+ YA+ G +  +RL+FD  K   + 
Sbjct: 162 RACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTV 221

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  Y      E S+ L+++M         ++  SVL ACS L  L  G+++HG +
Sbjct: 222 TWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYV 281

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           ++ GFD D  +   I+  Y +   +   RK+F+++  +DVVSW+++IA    N+   + +
Sbjct: 282 LRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAM 341

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +F  MVR+G +PD     S+  +CG L +L+  R +H + ++  I  D  + N  I MY
Sbjct: 342 DLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMY 401

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KC  L +A + F  +      S+ AMI  Y+R     +AL+ F +M      P L+T +
Sbjct: 402 AKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++LG  + L  L     +HC II+ G+  +  + G ALI+ Y++C  + +   V   I +
Sbjct: 462 SLLGLSSSLFLLELSSQIHCLIIKFGVSLD-SFAGSALIDVYSKCSCVGDARLVFEEIYD 520

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+I+ WN + S Y+++  ++E+L+L   +Q   L P+ F+ A+ ++A  N+ SL+ G Q 
Sbjct: 521 RDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQF 580

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H  VIK+   D+ FV +SL+DMY+KCG    ++  F    Q+ +  WNSMI  + Q+G++
Sbjct: 581 HNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDA 640

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +A+ +F +M +  ++ + VTF+  + ACS+ G L+ G   HH                 
Sbjct: 641 AKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLG--FHH----------------- 681

Query: 541 TDMYAKCGDLQTAQRVFDSMS----ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                           F+SMS    E  +  ++ M+   G  G++ +A    K+M    I
Sbjct: 682 ----------------FESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKM---PI 722

Query: 597 KPNEVTFMNILWACSHSGSVEEGKF 621
           KP  V + ++L AC  SG VE G +
Sbjct: 723 KPAAVVWRSLLSACRVSGHVELGTY 747



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 174/587 (29%), Positives = 321/587 (54%), Gaps = 11/587 (1%)

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTS 135
           +  IL+  K+ RE   +     P++L +          +K+H  I+  GF + DV +  +
Sbjct: 40  DSPILIQRKIGRELGKLLQLPSPNILTSHYY-------KKIHAHIVVLGFHQHDVFLVNT 92

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-P 194
           +L  Y +     DA+K+FD M  R++V+WSS+++ Y  +    E L +F   +R   E P
Sbjct: 93  LLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKP 152

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +   + S+  AC +L +L  A  +HG V++     D  +G S I  Y+K G +  A   F
Sbjct: 153 NEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIF 212

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             ++ + T +WTA+I+ Y + G  + +L+ F +M E    P+   + +VL +C+ L +L 
Sbjct: 213 DGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLE 272

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  ++R+G   +   +   +I+FY +C K+    K+ + + +++++SW  +I+  
Sbjct: 273 GGKQIHGYVLRRGFDMDVSVVN-GIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGC 331

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
            +     +A++L V+M   G  PD+F   S L++CG++ +LQ G Q+H + IK++   D+
Sbjct: 332 MQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDD 391

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           FV++ LIDMY+KC     A  +F+ +   +VV +N+MI G+ +    +EA++LF +M L+
Sbjct: 392 FVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLS 451

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
                 +TF++ +   S++  LE    +H  +I +GV  D +  +AL D+Y+KC  +  A
Sbjct: 452 LSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDA 511

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           + VF+ + +R++V W+AM   Y    +  ++  L+K +  S +KPNE TF  ++ A S+ 
Sbjct: 512 RLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNI 571

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
            S+  G+ + N +   G++ D      +VD+ ++ G IE + K   S
Sbjct: 572 ASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSS 618


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/735 (33%), Positives = 409/735 (55%), Gaps = 10/735 (1%)

Query: 13  LTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVF--DTFKEPDSFMWAVLIKC 69
           L R HA  LV+G L    P +  L+ SYA +  + S+ L+     F+   +F+W  L + 
Sbjct: 30  LRRAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRA 89

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYP---SVLRACSSLGDLGSGEKVHGRIIKCGF 126
                   E++ +Y++M+R      +  +P       A +       G ++H   ++ G 
Sbjct: 90  LASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGL 149

Query: 127 DKDDVIQTSILCT-YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
              DV   + L T Y   G   DAR+VFD+M +RDVVSW+S++++   N  + +  +   
Sbjct: 150 LLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVV 209

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M+R GV  +  +++S+  ACG          +HG VL+  +     LGN+ + MY K G
Sbjct: 210 GMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFG 269

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           DL S+   F  ++++   SW + I C+  +G+ +  LE F  M E    P  +TL ++L 
Sbjct: 270 DLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLP 329

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +   LG+   GK +H   IR+ +  +  ++   L++ YA+ G   +   +   I  RN++
Sbjct: 330 ALVDLGYFHLGKELHGYSIRRAVESDI-FIANTLMDMYAKFGCSEKASAIFENIEVRNVV 388

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN +I+   + G   EA  L+++MQ  G  P+SF++ + L AC  V S+++G QIH   
Sbjct: 389 SWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWS 448

Query: 426 IKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           I+     D FV ++LID+Y+KCG  NLA  +F+R  +K  V +N++I G+ Q+    E++
Sbjct: 449 IRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESL 507

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
           +LF QM L  +E D V+F+  + ACSN+   ++GK +H  L+   +    ++  +L D+Y
Sbjct: 508 HLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVY 567

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            K G L TA ++F+ +++++V SW+ MI  YGMHGQ++ A  LF  M D GI+ + V+++
Sbjct: 568 TKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYI 627

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            +L  CSH G V+ GK YF+ M    ++P   HYACMVDLL R+G +  + ++I +MPF 
Sbjct: 628 AVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFR 687

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
           AN  +WGALL  CRIH  I++ +   + L      ++GYYTLL N+Y+E G W+E   V+
Sbjct: 688 ANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVK 747

Query: 725 SIMEVTGLKKVPGYS 739
            +M+   ++K P YS
Sbjct: 748 KLMKSRKVQKNPAYS 762



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 2/295 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +++   ++HA  +   L  D   S  LI+ YA+ G L  +R +FD   E D 
Sbjct: 429 LPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDG 487

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +  LI  Y  +    ES+ L+ +M           +   L ACS+L     G+++HG 
Sbjct: 488 VSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGV 547

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K   D    +  S+L  Y + G LD A K+F+++T +DV SW+++I  Y  +  +   
Sbjct: 548 LVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVA 607

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            ++F  M  +G+E D V+ +++   C     +   +     ++ + IK         + +
Sbjct: 608 FELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDL 667

Query: 241 YSKCGDLLSAERTFVKIEKRCTTS-WTAMISCYNRSGWFQKALESFVKMLEVKEE 294
             + G L  +      +  R  +  W A++      G  + A  +   + E+K E
Sbjct: 668 LGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPE 722


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/738 (34%), Positives = 407/738 (55%), Gaps = 8/738 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-FMWA 64
           S     +L +LH+ ++  GLH+    S +LI  YA      SS  VF      ++ + W 
Sbjct: 84  SAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWN 143

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I+    N  F E++ LY +  R +     + +PSV+ AC+ L D    + +H R++  
Sbjct: 144 SIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXM 203

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF  D  I  +++  Y  F  LD ARKVF++M  RDVVSW+S+I+ Y  N   +E L+++
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 263

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           +     GV PD  TM S+  ACG L S+     IHG + +  IK D  + N  + MY K 
Sbjct: 264 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 323

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
             L+   R F K+  R   SW  MI  Y++ G ++++++ F++M+  + +P+L+T+ ++L
Sbjct: 324 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSIL 382

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP-ALIEFYAECGKMSECEKVIHAIGERN 363
            +C  LG L  GK VH  +I  G   E D      LI  YA+CG +   ++V   +  ++
Sbjct: 383 QACGHLGDLEFGKYVHDYMITSGY--ECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 440

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            +SWN +I+ Y + G   EA++L   M+T  + PDS +    LS    +G L LG ++H 
Sbjct: 441 SVSWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLGDLXLGKELHC 499

Query: 424 HVIKIDCKDEFVQS-SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            + K+      V S +L+DMY+KCG    +  +FE ++ + ++ WN++I     + +   
Sbjct: 500 DLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 559

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            + +  +M    +  D  T L+ +  CS +    +GK +H  +   G+  D+ +   L +
Sbjct: 560 GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIE 619

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG L+ + +VF  M  ++VV+W+A+I   GM+G+   A   F +M  +GI P+ V 
Sbjct: 620 MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 679

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+ I++ACSHSG VEEG  YF+ M+  + +EP ++HYAC+VDLLSRS  ++ A   I SM
Sbjct: 680 FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 739

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   + SIWGALL+ CR+    ++ + + + +     +D GYY L+SN+YA  G WD+  
Sbjct: 740 PLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVR 799

Query: 722 KVRSIMEVTGLKKVPGYS 739
            +R  ++  GLKK PG S
Sbjct: 800 SIRKSIKARGLKKDPGCS 817


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/779 (31%), Positives = 418/779 (53%), Gaps = 77/779 (9%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           R   NLR   ++HA L+V G+       +RL+E Y + G +  +R +FD   E + F W 
Sbjct: 100 RKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWT 159

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +++ Y     +EE+I L++ M+ E     +F++P V +ACS L +   G+ V+  ++  
Sbjct: 160 AIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI 219

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ +  ++ SIL  + + G +D AR+ F+++  +DV  W+ +++ Y    +  + LK  
Sbjct: 220 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCI 279

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M   GV+PD VT                                    N+ I  Y++ 
Sbjct: 280 SDMKLSGVKPDQVTW-----------------------------------NAIISGYAQS 304

Query: 245 GDLLSAERTFVKIE-----KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           G    A + F+++      K    SWTA+I+   ++G+  +AL  F KM+    +PN IT
Sbjct: 305 GQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSIT 364

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + + + +C  L  LR G+ +H   I+         +G +L+++YA+C  +    +    I
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 424

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQ---------TW----------------- 393
            + +++SWN +++ YA +G  +EA+ELL +M+         TW                 
Sbjct: 425 KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAAL 484

Query: 394 ---------GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
                    G+ P++ +++ +L+ACG V +L+LG +IHG+V++   +    V S+LI MY
Sbjct: 485 EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMY 544

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           S C    +A  +F  +  + VV+WNS+I    Q+G S+ A++L  +M L+ +E++ VT +
Sbjct: 545 SGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 604

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           +A+ ACS +  L +GK +H  +I  G+    +I  +L DMY +CG +Q ++R+FD M +R
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR 664

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           ++VSW+ MI  YGMHG   DA +LF+     G+KPN +TF N+L ACSHSG +EEG  YF
Sbjct: 665 DLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYF 724

Query: 624 NAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
             M+  + ++P ++ YACMVDLLSR+G      + I  MPF  N ++WG+LL  CRIH  
Sbjct: 725 KMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCN 784

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            D+ +   + L       +G Y L++NIY+  G W++  K+R +M+  G+ K PG S I
Sbjct: 785 PDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 843



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 172/701 (24%), Positives = 308/701 (43%), Gaps = 117/701 (16%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F++C+   N R    ++ ++L  G   +      +++ + + G +  +R  F+  +  D
Sbjct: 196 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            FMW +++  Y                                   +S G+     K   
Sbjct: 256 VFMWNIMVSGY-----------------------------------TSKGEFKKALKCIS 280

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-----SRDVVSWSSIIASYFDN 174
            +   G   D V   +I+  Y + G  ++A K F +M        +VVSW+++IA    N
Sbjct: 281 DMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQN 340

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR-RKIKIDGPL 233
               E L +F  MV EGV+P+ +T+ S   AC  L  LR  R IHG+ ++  ++  D  +
Sbjct: 341 GYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLV 400

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA------------ 281
           GNS +  Y+KC  +  A R F  I++    SW AM++ Y   G  ++A            
Sbjct: 401 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGI 460

Query: 282 -----------------------LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
                                  LE F +M  +  +PN  T+   L +C  +  L+ GK 
Sbjct: 461 EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +H  ++R  +      +G ALI  Y+ C  +     V   +  R+++ WN +IS  A+ G
Sbjct: 521 IHGYVLRNHIELSTG-VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG 579

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQS 437
            S  AL+LL +M    +  ++ ++ S+L AC  + +L+ G +IH  +I+       F+ +
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SLIDMY +CG    +  +F+ + Q+ +V WN MI  +  +G  ++A+NLF       L+ 
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKP 699

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           + +TF   + ACS+ G +E+G W + K++    + +  +D A                  
Sbjct: 700 NHITFTNLLSACSHSGLIEEG-WKYFKMM----KTEYAMDPA------------------ 736

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
                  V  ++ M+D     GQ N+     ++M     +PN   + ++L AC    + +
Sbjct: 737 -------VEQYACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGACRIHCNPD 786

Query: 618 EGKFYFNAMRIFGVEPDLQ-HYACMVDLLSRSGDIEGAFKM 657
             ++   A  +F +EP    +Y  M ++ S +G  E A K+
Sbjct: 787 LAEYA--ARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 126/264 (47%), Gaps = 12/264 (4%)

Query: 475 YQNGNSLEAINLFHQMYLN----CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           ++NG    A  L   M L     C+E+    + + +Q C  +  L  G  VH +L+  GV
Sbjct: 65  HRNGVLNNAAMLLSSMDLTNPDECIEI----YASILQKCRKLYNLRLGFQVHAQLVVNGV 120

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
               ++ + L ++Y + G ++ A+R+FD MSERNV SW+A+++ Y   G   +   LF  
Sbjct: 121 DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M++ G++P+   F  +  ACS   +   GK  ++ M   G E +      ++D+  + G 
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN-DNGYYTLLSN 709
           ++ A +    + F  +  +W  +++G               ++ ++G   D   +  + +
Sbjct: 241 MDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLK 733
            YA+ G ++E  K    +E+ GLK
Sbjct: 300 GYAQSGQFEEASKY--FLEMGGLK 321


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/717 (34%), Positives = 394/717 (54%), Gaps = 8/717 (1%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQ 90
           +TR+I  Y+  GS   SR+VFD  +  + F W  ++  Y  N  FE+++ ++ ++I   +
Sbjct: 37  NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTE 96

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
               NF  P V++AC+ L DLG G+ +HG   K     D  +  +++  YG+ G +++A 
Sbjct: 97  HKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAV 156

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV--REGVEPDFVTMLSLAEACGE 208
           KVF+ M  R++VSW+SII  + +N  + E    F  M+   E   PD  T++++   C  
Sbjct: 157 KVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAG 216

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
              +    ++HG  ++  +  +  + NS I MYSKC  L  A+  F K +K+   SW +M
Sbjct: 217 EEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSM 276

Query: 269 ISCYNRSGWFQKALESFVKML--EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           I  Y R     +      KM   + K + +  T++ VL  C     L+  K +H    R 
Sbjct: 277 IGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRH 336

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G+    + +  A I  Y  CG +   E+V   +  + + SWN L+  YA+    ++AL+L
Sbjct: 337 GLQSN-ELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDL 395

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
            +QM   GL PD F++ S L AC  + SL  G +IHG  ++     D F+  SL+ +Y  
Sbjct: 396 YLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYIC 455

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           CG    A +LF+ ++ +S+V WN MI G+ QNG   EAINLF QM  + ++  E+  +  
Sbjct: 456 CGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCV 515

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
             ACS +  L  GK +H   +   + +DI++ +++ DMYAK G +  +QR+FD + E++V
Sbjct: 516 CGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDV 575

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            SW+ +I  YG+HG+  +A  LF++ML  G+KP++ TF  IL ACSH+G VE+G  YFN 
Sbjct: 576 ASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 635

Query: 626 M-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M  +  +EP L+HY C+VD+L R+G I+ A ++I  MP   +  IW +LL+ CRIH  + 
Sbjct: 636 MLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLG 695

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + +  +L          Y L+SN++A  G WD+  +VR  M+  GL+K  G S I
Sbjct: 696 LGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWI 752



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 324/614 (52%), Gaps = 12/614 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRI-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           +L+AC    D+  G ++H  +     F  D V+ T I+  Y   G   D+R VFDK+  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSI 218
           ++  W++I+++Y  N    + + +F  ++     +PD  T+  + +AC  L  L   + I
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG   +  +  D  +GN+ I MY KCG +  A + F  + +R   SW ++I  ++ +G+ 
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 279 QKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           Q++  +F +ML  +E   P++ TL+TVL  CAG   + +G +VH   ++ G+  E   + 
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEEL-MVN 242

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT--WG 394
            +LI+ Y++C  +SE + +     ++NI+SWN +I  YAR+        LL +MQT    
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           +  D F++ + L  C     LQ   ++HG+  +   + +E V ++ I  Y++CG    + 
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F+ +  K+V  WN+++CG+ QN +  +A++L+ QM  + L+ D  T  + + ACS + 
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  G+ +H   +  G+  D +I  +L  +Y  CG    AQ +FD M  R++VSW+ MI 
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 482

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVE 632
            Y  +G  ++A +LF+QML  GI+P E+  M +  ACS   ++  GK  +  A++    E
Sbjct: 483 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 542

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEK 691
            D+   + ++D+ ++ G I G  + I       + + W  ++ G  IH R  + ++  EK
Sbjct: 543 -DIFVSSSIIDMYAKGGCI-GLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEK 600

Query: 692 ELSVTGTNDNGYYT 705
            L +    D+  +T
Sbjct: 601 MLRLGLKPDDFTFT 614



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 244/484 (50%), Gaps = 6/484 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+     ++ K   +H   +  GL+ +   +  LI+ Y++   L  ++L+FD   + + 
Sbjct: 211 LPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNI 270

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATI--SNFIYPSVLRACSSLGDLGSGEKVH 118
             W  +I  Y        +  L  KM  E A +    F   +VL  C    +L S +++H
Sbjct: 271 VSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELH 330

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G   + G   ++++  + +  Y   G L  + +VFD M ++ V SW++++  Y  N+D  
Sbjct: 331 GYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPR 390

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L ++  M   G++PD+ T+ SL  AC  + SL     IHG  LR  + +D  +G S +
Sbjct: 391 KALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLL 450

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y  CG   +A+  F  +E R   SW  MI+ Y+++G   +A+  F +ML    +P  I
Sbjct: 451 SLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEI 510

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            ++ V G+C+ L  LR GK +HC  ++  +  E  ++  ++I+ YA+ G +   +++   
Sbjct: 511 AIMCVCGACSQLSALRLGKELHCFALKAHL-TEDIFVSSSIIDMYAKGGCIGLSQRIFDR 569

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E+++ SWN++I+ Y   G  KEALEL  +M   GL PD F+    L AC + G ++ G
Sbjct: 570 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 629

Query: 419 LQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFY 475
           L+    ++ +   +  ++  + ++DM  + G  + A  L E +       +W+S++    
Sbjct: 630 LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCR 689

Query: 476 QNGN 479
            +GN
Sbjct: 690 IHGN 693



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 203/413 (49%), Gaps = 8/413 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+    + L+ L  LH +    GL  +   +   I +Y   G+L SS  VFD       
Sbjct: 314 LPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTV 373

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  L+  Y  N+   +++ LY +M         F   S+L ACS +  L  GE++HG 
Sbjct: 374 SSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGF 433

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ G   D  I  S+L  Y   G    A+ +FD M  R +VSW+ +IA Y  N    E 
Sbjct: 434 ALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEA 493

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M+ +G++P  + ++ +  AC +L +LR  + +H   L+  +  D  + +S I M
Sbjct: 494 INLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDM 553

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+K G +  ++R F ++ ++   SW  +I+ Y   G  ++ALE F KML +  +P+  T 
Sbjct: 554 YAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTF 613

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +L +C+  G + +G     Q++    + P+ ++    +++     G++ +  ++I  +
Sbjct: 614 TGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY-TCVVDMLGRAGRIDDALRLIEEM 672

Query: 360 -GERNILSWNMLISE---YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
            G+ +   W+ L+S    +   G+ ++    L++++     P+++ + S+L A
Sbjct: 673 PGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE--KPENYVLISNLFA 723


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/585 (38%), Positives = 355/585 (60%), Gaps = 5/585 (0%)

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           + V W   I  Y  N   ++ L++++ M R G+ PD +  LS+ +ACG    L+  R +H
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             ++ R  + D  +G +   MY+KCG L +A + F ++ KR   SW A+I+ Y+++G   
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG-PA 338
           +AL  F +M     +PN  TL++V+  CA L  L +GK +HC  IR G+  E D L    
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI--ESDVLVVNG 261

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L+  YA+CG ++   K+   +  R++ SWN +I  Y+      EAL    +MQ  G+ P+
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
           S ++ S L AC ++ +L+ G QIHG+ I+   + ++ V ++L++MY+KCG  N AY LFE
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           R+ +K+VV WN++I G+ Q+G+  EA+ LF +M    ++ D    ++ + AC++   LE+
Sbjct: 382 RMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQ 441

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H   I  G   ++ + T L D+YAKCG++ TAQ++F+ M E++VVSW+ MI  YG+
Sbjct: 442 GKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGI 501

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQ 636
           HG   DA +LF +M ++G K + + F  IL ACSH+G V++G  YF  M+  +G+ P L+
Sbjct: 502 HGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLE 561

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYAC+VDLL R+G ++ A  +I +M    + ++WGALL  CRIH  I++ +   K L   
Sbjct: 562 HYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFEL 621

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             ++ GYY LLSNIYAE   W++  K+R +M+  G+KK PG S +
Sbjct: 622 DPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVV 666



 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 191/609 (31%), Positives = 325/609 (53%), Gaps = 21/609 (3%)

Query: 17  HAHLLVTGLH-----YDP-PASTRLIESYAEMGSLRSSRLVF-----DTFKEPD----SF 61
           H HL     H     Y P P  T  + +      ++++R V        F + D    + 
Sbjct: 27  HTHLHSISYHVCFYFYGPSPLPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAV 86

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           +W   I  Y+ N F+ +++ LY++M R        ++ SV++AC S  DL +G KVH  I
Sbjct: 87  VWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDI 146

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           I  GF+ D ++ T++   Y + G L++AR+VFD+M  RDVVSW++IIA Y  N    E L
Sbjct: 147 IARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEAL 206

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +F  M   G++P+  T++S+   C  L +L   + IH + +R  I+ D  + N  + MY
Sbjct: 207 ALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMY 266

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KCG++ +A + F ++  R   SW A+I  Y+ +    +AL  F +M     +PN IT++
Sbjct: 267 AKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMV 326

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +VL +CA L  L +G+ +H   IR G     D +G AL+  YA+CG ++   K+   + +
Sbjct: 327 SVLPACAHLFALEQGQQIHGYAIRSGFESN-DVVGNALVNMYAKCGNVNSAYKLFERMPK 385

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           +N+++WN +IS Y++ G   EAL L ++MQ  G+ PDSF++ S L AC +  +L+ G QI
Sbjct: 386 KNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI 445

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           HG+ I+   +    V + L+D+Y+KCG  N A  LFER+ ++ VV W +MI  +  +G+ 
Sbjct: 446 HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHG 505

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTA 539
            +A+ LF +M     ++D + F   + ACS+ G +++G ++       YG+   +     
Sbjct: 506 EDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYAC 565

Query: 540 LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           L D+  + G L  A  +  +MS E +   W A++    +H  +       K + +  + P
Sbjct: 566 LVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFE--LDP 623

Query: 599 NEVTFMNIL 607
           +   +  +L
Sbjct: 624 DNAGYYVLL 632



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 1/415 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S ++L+   ++H  ++  G   D    T L   Y + GSL ++R VFD   + D   W  
Sbjct: 132 SQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNA 191

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y  N    E++ L+ +M       ++    SV+  C+ L  L  G+++H   I+ G
Sbjct: 192 IIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSG 251

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            + D ++   ++  Y + G ++ A K+F++M  RDV SW++II  Y  N+   E L  F+
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFN 311

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G++P+ +TM+S+  AC  L +L   + IHG+ +R   + +  +GN+ + MY+KCG
Sbjct: 312 RMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCG 371

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           ++ SA + F ++ K+   +W A+IS Y++ G   +AL  F++M     +P+   +++VL 
Sbjct: 372 NVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLP 431

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +CA    L +GK +H   IR G       +G  L++ YA+CG ++  +K+   + E++++
Sbjct: 432 ACAHFLALEQGKQIHGYTIRSGFESNV-VVGTGLVDIYAKCGNVNTAQKLFERMPEQDVV 490

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           SW  +I  Y   G  ++AL L  +MQ  G   D  +  + L+AC + G +  GLQ
Sbjct: 491 SWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 213/446 (47%), Gaps = 36/446 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MP+      L +  ++H + + +G+  D      L+  YA+ G++ ++  +F+     D 
Sbjct: 228 MPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDV 287

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  N+   E++  +++M       ++    SVL AC+ L  L  G+++HG 
Sbjct: 288 ASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            I+ GF+ +DV+  +++  Y + G ++ A K+F++M  ++VV+W++II+ Y  +    E 
Sbjct: 348 AIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEA 407

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M  +G++PD   ++S+  AC    +L   + IHG+ +R   + +  +G   + +
Sbjct: 408 LALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDI 467

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG++ +A++ F ++ ++   SWT MI  Y   G  + AL  F KM E   + + I  
Sbjct: 468 YAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAF 527

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +L +C+  G + +G +   C     G+ P+ ++    L++     G + E   +I   
Sbjct: 528 TAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYA-CLVDLLGRAGHLDEANGII--- 583

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                            K MS E              PD+    + L AC    +++LG 
Sbjct: 584 -----------------KNMSLE--------------PDANVWGALLGACRIHCNIELGE 612

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSK 445
           Q   H+ ++D  +      L ++Y++
Sbjct: 613 QAAKHLFELDPDNAGYYVLLSNIYAE 638



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 139/242 (57%), Gaps = 3/242 (1%)

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           + + V+W   I G+ +NG   +A+ L++QM    +  D++ FL+ I+AC +   L+ G+ 
Sbjct: 82  RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           VH  +I+ G   D+ + TAL  MY KCG L+ A++VFD M +R+VVSW+A+I  Y  +GQ
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYA 639
             +A +LF +M  +GIKPN  T ++++  C+H  ++E+GK  +  A+R  G+E D+    
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIR-SGIESDVLVVN 260

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
            +V++ ++ G++  A K+   MP     S W A++ G  ++ +          + V G  
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVAS-WNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319

Query: 700 DN 701
            N
Sbjct: 320 PN 321


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/752 (31%), Positives = 415/752 (55%), Gaps = 12/752 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLH-YDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           + + R C +   L+   ++H   +  GLH  D    TRL+  Y      R +  VF +  
Sbjct: 43  LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLP 102

Query: 57  EPDS---FMWAVLIKCYMWNNFFEESILLYHKMIREQATI--SNFIYPSVLRACSSLGDL 111
              +     W  LI+       +  ++L Y KM    +     +  +P V+++C++LG +
Sbjct: 103 RGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAI 162

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             G  VH      G D D  + ++++  Y   G L DAR+VFD M  RD V W+ ++  Y
Sbjct: 163 ALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGY 222

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
                VS  +++F  M   G EP+F T+            L     +H   ++  ++ + 
Sbjct: 223 VKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + N+ + MY+KC  L    + F  + +    +W  MIS   ++G+  +AL  F  M + 
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P+ +TL+++L +   L    +GK +H  I+R  +  +  +L  AL++ Y +C  +  
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDV-FLVSALVDIYFKCRAVRM 401

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            + V  +    +++  + +IS Y   GMS+EA+++   +   G+ P++ ++AS L AC +
Sbjct: 402 AQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461

Query: 412 VGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           + +++LG ++H + +K   +   +V+S+L+DMY+KCG  +L++ +F +I  K  V WNSM
Sbjct: 462 MAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSM 521

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I  F QNG   EA+NLF +M +  ++   VT  + + AC+++  +  GK +H  +I   +
Sbjct: 522 ISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPI 581

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           R D++ ++AL DMY KCG+L+ A RVF+SM E+N VSW+++I  YG +G + ++ SL + 
Sbjct: 582 RADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRH 641

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M + G K + VTF+ ++ AC+H+G V+EG   F  M   + + P ++H+ACMVDL SR+G
Sbjct: 642 MQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAG 701

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            ++ A ++I  MPF  +  IWGALL+ CR+H+ +++ +   +EL     +++GYY L+SN
Sbjct: 702 KLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSN 761

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           I A  G WD   KVR +M+ T ++K+PGYS +
Sbjct: 762 INAVAGRWDGVSKVRRLMKDTKVQKIPGYSWV 793


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/752 (31%), Positives = 415/752 (55%), Gaps = 12/752 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLH-YDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           + + R C +   L+   ++H   +  GLH  D    TRL+  Y      R +  VF +  
Sbjct: 43  LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLP 102

Query: 57  EPDS---FMWAVLIKCYMWNNFFEESILLYHKMIREQATI--SNFIYPSVLRACSSLGDL 111
              +     W  LI+       +  ++L Y KM    +     +  +P V+++C++LG +
Sbjct: 103 RGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAI 162

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             G  VH      G D D  + ++++  Y   G L DAR+VFD M  RD V W+ ++  Y
Sbjct: 163 ALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGY 222

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
                VS  +++F  M   G EP+F T+            L     +H   ++  ++ + 
Sbjct: 223 VKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + N+ + MY+KC  L    + F  + +    +W  MIS   ++G+  +AL  F  M + 
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P+ +TL+++L +   L    +GK +H  I+R  +  +  +L  AL++ Y +C  +  
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDV-FLVSALVDIYFKCRAVRM 401

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            + V  +    +++  + +IS Y   GMS+EA+++   +   G+ P++ ++AS L AC +
Sbjct: 402 AQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461

Query: 412 VGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           + +++LG ++H + +K   +   +V+S+L+DMY+KCG  +L++ +F +I  K  V WNSM
Sbjct: 462 MAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSM 521

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I  F QNG   EA+NLF +M +  ++   VT  + + AC+++  +  GK +H  +I   +
Sbjct: 522 ISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPI 581

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           R D++ ++AL DMY KCG+L+ A RVF+SM E+N VSW+++I  YG +G + ++ SL + 
Sbjct: 582 RADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRH 641

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M + G K + VTF+ ++ AC+H+G V+EG   F  M   + + P ++H+ACMVDL SR+G
Sbjct: 642 MQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAG 701

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            ++ A ++I  MPF  +  IWGALL+ CR+H+ +++ +   +EL     +++GYY L+SN
Sbjct: 702 KLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSN 761

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           I A  G WD   KVR +M+ T ++K+PGYS +
Sbjct: 762 INAVAGRWDGVSKVRRLMKDTKVQKIPGYSWV 793


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/737 (33%), Positives = 415/737 (56%), Gaps = 12/737 (1%)

Query: 13  LTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVF--DTFKEPDSFMWAVLIKC 69
           L R HA  LV+G L    P +  L+ SYA +  + S+RL+      +   +F+W  L + 
Sbjct: 21  LRRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRA 80

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL-----GSGEKVHGRIIKC 124
                   E++ +Y+ M+R      +  +P  L A ++           G ++H   ++ 
Sbjct: 81  LASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRR 140

Query: 125 GFDKDDVIQTSILCT-YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
           G    DV   + L T Y   G   DAR+VFD+M +RD+VSW+S++++   N  + +  + 
Sbjct: 141 GLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRA 200

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
              M+R G+  +  +++S+  ACG         S+HG VL+  +     LGN+ + MY K
Sbjct: 201 VVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGK 260

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
            GDL S+ R F  ++++   SW + + C+  +G+ +  LE F  M E +  P  +TL ++
Sbjct: 261 FGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSL 320

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +   LG+   GK VH   IR+ M  +  ++  +L++ YA+ G + +   +   I  RN
Sbjct: 321 LPALVDLGYFHLGKEVHGYSIRRAMESDI-FIANSLMDMYAKFGCLEKASAIFENIEGRN 379

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SWN +I+  A+ G   EA  L+++MQ  G  P+SF++ + L AC  V S+++G QIH 
Sbjct: 380 VVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHA 439

Query: 424 HVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
             I      D FV ++LID+Y+KCG  ++A  +F+R  +K  V +N++I G+ Q+    E
Sbjct: 440 WSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFE 498

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           +++LF QM    +E D V+F+  + AC+N+   ++GK +H  L+   +    ++  +L D
Sbjct: 499 SLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLD 558

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           +Y K G L TA ++F+ ++ ++V SW+ MI  YGMHGQ++ A  LF  M D G+  + V+
Sbjct: 559 LYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVS 618

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           ++ +L ACSH G V+ GK YF+ M    ++P   HYACMVDLL R+G +  + ++I +MP
Sbjct: 619 YIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMP 678

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
           FPAN  +WGALL  CRIH  I++ +   + L       +GYYTLL N+Y+E G W+E  +
Sbjct: 679 FPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANE 738

Query: 723 VRSIMEVTGLKKVPGYS 739
           ++++M+   ++K P YS
Sbjct: 739 IKTLMKSRKVQKNPAYS 755



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 1/206 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +++   ++HA  +   L  D   S  LI+ YA+ G L  ++ +FD   E D 
Sbjct: 422 LPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDD 480

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +  LI  Y  +    ES+ L+ +M           +   L AC++L     G+++HG 
Sbjct: 481 VSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGV 540

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++   +    +  S+L  Y + G L  A K+F+++T +DV SW+++I  Y  +  +   
Sbjct: 541 LVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVA 600

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC 206
            ++F  M  +GV+ D V+ +++  AC
Sbjct: 601 FELFDLMKDDGVDYDHVSYIAVLSAC 626


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/756 (32%), Positives = 412/756 (54%), Gaps = 16/756 (2%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGL--HYDP-PAS--TRLIESYAEMGSLRSSRLVF 52
           + L R C     L    R+HA  + +GL     P PA+  TRL+  Y      R +  VF
Sbjct: 40  LALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVF 99

Query: 53  DTFKEPDS---FMWAVLIKCYMWNNFFEESILLYHKMIREQATI--SNFIYPSVLRACSS 107
            +     +     W  LI+ +        ++L Y KM    ++        P V+++C++
Sbjct: 100 SSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAA 159

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           LG L  G  VH      G D+D  + ++++  Y + G LD AR+VFD M  RD V W+ +
Sbjct: 160 LGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVM 219

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           +  Y    DV+  + +F  M   G +P+F T+      C     L     +H   ++  +
Sbjct: 220 MDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGL 279

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
           + +  + N+ + MY+KC  L  A R F  + +    +W  MIS   ++G    AL  F  
Sbjct: 280 EPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCD 339

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M +   +P+ +TL ++L +   L   ++GK +H  I+R     +  +L  AL++ Y +C 
Sbjct: 340 MQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDV-FLVSALVDIYFKCR 398

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            +   + V  A    +++  + +IS Y    MS+ A+++   +   G+ P++  VAS+L 
Sbjct: 399 DVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLP 458

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC ++ ++++G ++HG+V+K   +   +V+S+L+DMYSKCG  +L++ +F ++  K  V 
Sbjct: 459 ACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVT 518

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WNSMI  F QNG   EA++LF QM +  ++ + VT  + + AC+ +  +  GK +H  +I
Sbjct: 519 WNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIII 578

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
              +R D++ ++AL DMY KCG+L+ A RVF+ M E+N VSW+++I  YG HG + ++  
Sbjct: 579 KGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVD 638

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLL 645
           L   M + G K + VTF+ ++ AC+H+G V+EG   F  M   + +EP ++H +CMVDL 
Sbjct: 639 LLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLY 698

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
           SR+G ++ A + I  MPF  +  IWGALL+ CR+H+ +++ +   +EL     ++ GYY 
Sbjct: 699 SRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYV 758

Query: 706 LLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L+SNI A  G WD   K+R +M+   ++K+PGYS +
Sbjct: 759 LMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWV 794



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 12/299 (4%)

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD------EFVQSSLIDMYSKCGFKN 450
           P ++ + + L  C     L LGL+IH   +     D        +Q+ L+ MY       
Sbjct: 34  PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93

Query: 451 LAYLLFE---RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN--CLEMDEVTFLTA 505
            A  +F    R    + + WN +I GF   G+   A+  + +M+ +      D  T    
Sbjct: 94  DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           +++C+ +G L  G+ VH    + G+ +D+Y+ +AL  MYA  G L  A+ VFD M ER+ 
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           V W+ M+D Y   G +  A  LF+ M  SG  PN  T    L  C+    +  G      
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
              +G+EP++     +V + ++   +E A+++   MP   +   W  +++GC  +  +D
Sbjct: 274 AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRD-DLVTWNGMISGCVQNGLVD 331


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/748 (32%), Positives = 396/748 (52%), Gaps = 8/748 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M + + C  ++ L     +H H++      D      LI  Y + GS+  +R V++    
Sbjct: 145 MKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNH 204

Query: 58  PDSFM--WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            +  +  W  ++  Y+   + EE++ L  +M +    +       +L +C S   L  G 
Sbjct: 205 TERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGR 264

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H   +K     D  +   IL  Y + G + +AR+VFDKM ++ VVSW+ II  Y D  
Sbjct: 265 EIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCG 324

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
                 ++F  M +EGV P+ +T +++  A     +L+  +++H H+L    + D  +G 
Sbjct: 325 HSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGT 384

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY+KCG      + F K+  R   +W  MI      G +++A E + +M      P
Sbjct: 385 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMP 444

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N IT + +L +C     L  G+ +H ++++ G   +   +  ALI  YA CG + +   +
Sbjct: 445 NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS-VQNALISMYARCGSIKDARLL 503

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            + +  ++I+SW  +I   A+ G+  EAL +   MQ  GL P+  +  S L+AC +  +L
Sbjct: 504 FNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAAL 563

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             G +IH  VI+     D  V ++L++MYS CG    A  +F+R+ Q+ +V +N+MI G+
Sbjct: 564 DWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGY 623

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
             +    EA+ LF ++    L+ D+VT++  + AC+N G LE  K +H  ++  G   D 
Sbjct: 624 AAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDT 683

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            +  AL   YAKCG    A  VFD M +RNV+SW+A+I     HG+  D   LF++M   
Sbjct: 684 SLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKME 743

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
           GIKP+ VTF+++L ACSH+G +EEG+ YF +M R FG+ P ++HY CMVDLL R+G ++ 
Sbjct: 744 GIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDE 803

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
              +I +MPF AN  IWGALL  CRIH  + V +   +       ++   Y  LS++YA 
Sbjct: 804 VEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAA 863

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            G WD   K+R +ME  G+ K PG S I
Sbjct: 864 AGMWDSAAKLRKLMEQRGVTKEPGRSWI 891



 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 192/608 (31%), Positives = 330/608 (54%), Gaps = 6/608 (0%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           ++ A +++  Y  +L+ C  + DL +G +VH  II+     D     +++  Y + G ++
Sbjct: 134 QQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIE 193

Query: 148 DARKVFDKM--TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           +AR+V++K+  T R V SW++++  Y     + E LK+   M + G+     T + L  +
Sbjct: 194 EARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSS 253

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C    +L   R IH   ++ ++  D  + N  + MY+KCG +  A   F K+E +   SW
Sbjct: 254 CKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSW 313

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           T +I  Y   G  + A E F KM +    PN IT I VL + +G   L+ GK+VH  I+ 
Sbjct: 314 TIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILN 373

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G   +   +G AL++ YA+CG   +C +V   +  R++++WN +I   A  G  +EA E
Sbjct: 374 AGHESDL-AVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASE 432

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
           +  QMQ  G+MP+  +    L+AC N  +L  G +IH  V+K     D  VQ++LI MY+
Sbjct: 433 IYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYA 492

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           +CG    A LLF ++ +K ++ W +MI G  ++G   EA+ +F  M    L+ + VT+ +
Sbjct: 493 RCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTS 552

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + ACS+   L+ G+ +H ++I  G+  D ++   L +MY+ CG ++ A++VFD M++R+
Sbjct: 553 ILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRD 612

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +V+++AMI  Y  H    +A  LF ++ + G+KP++VT++N+L AC++SGS+E  K   +
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHS 672

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR-I 683
            +   G   D      +V   ++ G    A  +   M    N   W A++ GC  H R  
Sbjct: 673 LVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHGRGQ 731

Query: 684 DVMKTIEK 691
           DV++  E+
Sbjct: 732 DVLQLFER 739



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 161/318 (50%), Gaps = 8/318 (2%)

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK--DEFVQSSL 439
            A++++  +Q  G   +S      L  C  V  L  G ++H H+I+  C   D++  ++L
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQ-HCTVLDQYTVNAL 182

Query: 440 IDMYSKCGFKNLAYLLFERIQ--QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           I+MY +CG    A  ++ ++   +++V  WN+M+ G+ Q G   EA+ L  +M  + L +
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
              T +  + +C +   LE G+ +H + +   +  D+ +   + +MYAKCG +  A+ VF
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D M  ++VVSW+ +I  Y   G    A  +F++M   G+ PN +T++N+L A S   +++
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---DIEGAFKMIHSMPFPANGSIWGALL 674
            GK   + +   G E DL     +V + ++ G   D    F+ + +    A  ++ G L 
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 675 NGCRIHKRIDVMKTIEKE 692
            G    +  ++   +++E
Sbjct: 423 EGGNWEEASEIYHQMQRE 440


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/749 (32%), Positives = 401/749 (53%), Gaps = 13/749 (1%)

Query: 3   LFRSCTNLRKLTRL----HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L  SC    +L R+    HA  +V+GL  D   +  L+  Y+++G L  +R +FD+    
Sbjct: 35  LLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSR 94

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN------FIYPSVLRACSSLGDLG 112
           +   W   I  Y  +   ++++LL+       A   +      F+  S LRAC+      
Sbjct: 95  NLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAAR 154

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
            GE+VHG   K G D +  + T+++  Y + G +D A  VFD + +R+ V+W+++I  Y 
Sbjct: 155 FGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYS 214

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
                   L++F  M  +GV PD   + S A AC  L  +   R IHG+  R   + D  
Sbjct: 215 QAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDAS 274

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + N+ I +Y KC  LL A R F  +E R   SWT MI+ Y ++    +A+  F ++ +  
Sbjct: 275 VVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAG 334

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            +P++    ++L SC  L  + +G+ VH  +I+  +  + +Y+  ALI+ YA+C  ++E 
Sbjct: 335 WQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESD-EYVKNALIDMYAKCEHLTEA 393

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             V  A+ E + +S+N +I  YAR G    A+E+  +M+   L P   +  S L    + 
Sbjct: 394 RAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSR 453

Query: 413 GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             L+L  QIHG ++K     D +  S+LID+YSK    + A L+F  +Q + +V+WN+MI
Sbjct: 454 SDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMI 513

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G  QN    EA+ LF ++ ++ L  +E TF+  +   S +  +  G+  H ++I  G  
Sbjct: 514 FGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGAD 573

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            D +I  AL DMYAKCG ++  + +F+S   ++V+ W++MI  Y  HG   +A  +F  M
Sbjct: 574 SDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMM 633

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGD 650
             +G++PN VTF+++L AC+H+G V+EG  +FN+M+  + VEP  +HYA +V+L  RSG 
Sbjct: 634 EGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGK 693

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
           +  A + I  MP     +IW +LL+ C +   +++ +   +   +    D+G   L+SNI
Sbjct: 694 LHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNI 753

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           YA +G W +  K+R  M+  G+ K PGYS
Sbjct: 754 YASKGLWADAQKLRQGMDCAGVVKEPGYS 782


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/750 (33%), Positives = 407/750 (54%), Gaps = 12/750 (1%)

Query: 3   LFRSCTNLRKL-TRLHAHLLVTGLHY---DPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L R+C + + +      H LV+  H    D   STR+I  Y+  GS   SR VFD  KE 
Sbjct: 98  LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEKV 117
           D F++  L+  Y  N  F ++I L+ +++        NF  P V +AC+ + D+  GE V
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +K G   D  +  +++  YG+ G ++ A KVF+ M +R++VSW+S++ +  +N   
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277

Query: 178 SEGLKMFHSMV---REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            E   +F  ++    EG+ PD  TM+++  AC  +  +R    +HG   +  I  +  + 
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN 337

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKE 293
           NS + MYSKCG L  A   F     +   SW  +I  Y++ G F+   E   +M  E K 
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKV 397

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N +T++ VL +C+G   L   K +H    R G   + + +  A +  YA+C  +   E
Sbjct: 398 RVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKD-ELVANAFVAAYAKCSSLDCAE 456

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V   +  + + SWN LI  +A+ G   ++L+L + M   G+ PD F++ S L AC  + 
Sbjct: 457 RVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLK 516

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L+ G +IHG +++   + DEF+  SL+ +Y +C    L  L+F++++ KS+V WN MI 
Sbjct: 517 FLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMIT 576

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           GF QN    EA++ F QM    ++  E+     + ACS +  L  GK VH   +   + +
Sbjct: 577 GFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSE 636

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D ++  AL DMYAKCG ++ +Q +FD ++E++   W+ +I  YG+HG    A  LF+ M 
Sbjct: 637 DAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQ 696

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDI 651
           + G +P+  TF+ +L AC+H+G V EG  Y   M+ ++GV+P L+HYAC+VD+L R+G +
Sbjct: 697 NKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQL 756

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
             A K+++ MP   +  IW +LL+ CR +  +++ + + K+L     N    Y LLSN+Y
Sbjct: 757 TEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLY 816

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A  G WDE  KVR  M+  GL K  G S I
Sbjct: 817 AGLGKWDEVRKVRQRMKENGLHKDAGCSWI 846


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 255/744 (34%), Positives = 406/744 (54%), Gaps = 16/744 (2%)

Query: 12  KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +L R+HA  + +GL   P    +L+ +Y+  G    + L F     PD+F+W  LI+ + 
Sbjct: 27  ELLRVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHH 86

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD- 130
             + F  ++  + +M+   A  S F  P    A + LG LG G  VH   ++ G    D 
Sbjct: 87  CASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDG 146

Query: 131 ---VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
               + +S++  Y   G + DA K+F++M  RDVV+W+++++    N +  +GL+    M
Sbjct: 147 GSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEM 206

Query: 188 VREG----VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           VR        P+  TM S  EACG L  L   R +HG+ ++  +     + ++   MYSK
Sbjct: 207 VRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSK 266

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           C     A   F ++ ++   SWT++I  Y   G  ++A+E F +M+E   +P+ + +  +
Sbjct: 267 CHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCL 326

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L      G +  GK+ H  I+++  G     +G ALI  Y +   +    +V   + +R+
Sbjct: 327 LSGLGNSGNVHGGKAFHAVIMKRNFGDNV-LVGNALISMYGKFELVDNAGRVFRLLHQRD 385

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQ---TWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             SWN++I  Y + G   + LEL  +MQ   T+  + D+ S+ S++S+C  +  L+LG  
Sbjct: 386 ADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRS 445

Query: 421 IHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQN 477
            H + IK  +D +D  V + LI MY +CG  + A  +F   + K  VV WN++I  +   
Sbjct: 446 AHCYSIKHWLD-EDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHL 504

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G+S  A++L+ QM    L  +  T +T I AC+N+  LE+G+ +H  +   G   D+ I+
Sbjct: 505 GHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSIN 564

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           TAL DMYAKCG L TA+R+FDSM + +VV+W+ MI  YGMHG+   A  LF +M    IK
Sbjct: 565 TALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIK 624

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           PN VTF+ IL AC HSG +EEG+  F  M  + +EP+L+HYACMVDLL +SG ++ A  M
Sbjct: 625 PNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDM 684

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           + +MP   +G IWG LL+ C++H   ++   I K+   +   + GYY L+SN Y     W
Sbjct: 685 VLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKW 744

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           DE  K+R  M+  G++K  G+S +
Sbjct: 745 DEIEKLREAMKNHGVQKGAGWSAV 768



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 4/187 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + +  +C NL  L R   +H+++   G  YD   +T LI+ YA+ G L ++R +FD+  +
Sbjct: 530 ITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQ 589

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W V+I  Y  +   ++++ L+ KM       +   + ++L AC   G L  G ++
Sbjct: 590 HDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQL 649

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNAD 176
             R+ K   + +      ++   G+ G L +A  +   M    D   W +++++   + D
Sbjct: 650 FTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDD 709

Query: 177 VSEGLKM 183
              GL++
Sbjct: 710 FEMGLRI 716


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/764 (32%), Positives = 413/764 (54%), Gaps = 36/764 (4%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + +L + ++  GL+ +      L++ YA  G +  +    D  +      W  +I  Y+ 
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK 253

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
              +EE+  ++ +M++      NF + S LR C +L     G++VH ++I CGF  D  +
Sbjct: 254 ILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 313

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y +    +   KVFD+M  R+ V+W+SII++       ++ L +F  M   G 
Sbjct: 314 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGY 373

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           + +   + S+  A   L  +   R +HGH++R  +  D  LG++ + MYSKCG +  A +
Sbjct: 374 KSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQ 433

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLG 311
            F  + +R   S+ A+++ Y + G  ++ALE +  M  E   +P+  T  T+L  CA   
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQR 493

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
              +G+ +H  +IR  +      +   L+  Y+ECG+++  +++ + + ERN  SWN +I
Sbjct: 494 NDNQGRQIHAHLIRANITKNI-IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMI 552

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             Y + G ++EAL L  QMQ  G+ PD FS++S LS+C ++   Q G ++H  +++   +
Sbjct: 553 EGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTME 612

Query: 432 DE-FVQSSLIDMYSKCGFKNLAYL-------------------------------LFERI 459
           +E  +Q  L+DMY+KCG  + A+                                LF+++
Sbjct: 613 EEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM 672

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           +Q++  +WNS++ G+   G   E+ N F +M  + +E D +T +T +  CS++  LE G 
Sbjct: 673 EQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGD 732

Query: 520 WVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
            +H  +I  G V   + ++TAL DMY+KCG +  A+ VFD+M+ +N+VSW+AMI  Y  H
Sbjct: 733 QLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKH 792

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQH 637
           G   +A  L+++M   G+ PNEVTF+ IL ACSH+G VEEG   F +M+  + +E   +H
Sbjct: 793 GCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEH 852

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           Y CMVDLL R+G +E A + +  MP     S WGALL  CR+HK +D+ +   + L    
Sbjct: 853 YTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELD 912

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             + G Y ++SNIYA  G W E   +R +M++ G+KK PG S I
Sbjct: 913 PQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 956



 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 197/667 (29%), Positives = 352/667 (52%), Gaps = 14/667 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRS---SRLVFDTFK 56
           L + C +     R   +H  ++  G + D    T+++  YA  G L     +R +F+   
Sbjct: 77  LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E +   W  +I  Y   + + E + LY +M         F +PSV++AC ++ D+G   +
Sbjct: 137 ERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQ 196

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +   ++K G + +  +  +++  Y  FG +DDA    D++    VV+W+++IA Y     
Sbjct: 197 LQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILS 256

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E   +F  M++ GV PD  T  S    CG L S    + +H  ++    K D  +GN+
Sbjct: 257 WEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNA 316

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY+KC D  S  + F ++ +R   +W ++IS   + G F  AL  F++M E   + N
Sbjct: 317 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSN 376

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
              L ++L + AGL  + +G+ +H  ++R  +  +   LG AL++ Y++CG + E  +V 
Sbjct: 377 RFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDI-ILGSALVDMYSKCGMVEEAHQVF 435

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSL 415
            ++ ERN +S+N L++ Y ++G ++EALEL   MQ+  G+ PD F+  + L+ C N  + 
Sbjct: 436 RSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRND 495

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             G QIH H+I+ +  K+  V++ L+ MYS+CG  N A  +F R+ +++   WNSMI G+
Sbjct: 496 NQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY 555

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            QNG + EA+ LF QM LN ++ D  +  + + +C ++   +KG+ +H+ ++   + ++ 
Sbjct: 556 QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 615

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            +   L DMYAKCG +  A +V+D   +++V+  + M+  +   G+ NDA +LF QM   
Sbjct: 616 ILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME-- 673

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
             + N   + +IL   ++ G  +E   +F  M    +E D+     +V+L S    +E  
Sbjct: 674 --QRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHG 731

Query: 655 FKMIHSM 661
              +HS+
Sbjct: 732 -DQLHSL 737



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 170/575 (29%), Positives = 314/575 (54%), Gaps = 6/575 (1%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           +  + ++   Y S+++ C        G+ +H ++I  G++ D  + T IL  Y   GCLD
Sbjct: 64  KPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123

Query: 148 D---ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
           D   ARK+F++M  R++ +W+++I +Y    D  E L+++  M   G   D  T  S+ +
Sbjct: 124 DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIK 183

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
           AC  +  +   R +   V++  +  +  +G + +  Y++ G +  A  +  +IE     +
Sbjct: 184 ACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVT 243

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W A+I+ Y +   +++A   F +ML++   P+  T  + L  C  L     GK VH ++I
Sbjct: 244 WNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
             G   +  ++G ALI+ YA+C     C KV   +GERN ++WN +IS  A+ G   +AL
Sbjct: 304 ACGFKGD-TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDAL 362

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMY 443
            L ++MQ  G   + F++ S L A   +  +  G ++HGH+++ +   D  + S+L+DMY
Sbjct: 363 VLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMY 422

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLEMDEVTF 502
           SKCG    A+ +F  + +++ V +N+++ G+ Q G + EA+ L+H M   + ++ D+ TF
Sbjct: 423 SKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTF 482

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            T +  C+N     +G+ +H  LI   + K+I ++T L  MY++CG L  A+ +F+ M+E
Sbjct: 483 TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 542

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           RN  SW++MI+ Y  +G+  +A  LFKQM  +GIKP+  +  ++L +C      ++G+  
Sbjct: 543 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 602

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            N +    +E +      +VD+ ++ G ++ A+K+
Sbjct: 603 HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 637



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 198/386 (51%), Gaps = 8/386 (2%)

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE---C 352
           N +   +++  C      + GKS+H Q+I  G  P+  YL   ++  YA  G + +    
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDA-YLMTKILMLYARSGCLDDLCYA 128

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            K+   + ERN+ +WN +I  YAR     E L L  +M+  G   D F+  S + AC  +
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188

Query: 413 GSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
             +    Q+   V+K  ++C + FV  +L+D Y++ G+ + A    + I+  SVV WN++
Sbjct: 189 EDMGGVRQLQSSVVKAGLNC-NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAV 247

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I G+ +  +  EA  +F +M    +  D  TF +A++ C  +   + GK VH KLI+ G 
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 307

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           + D ++  AL DMYAKC D ++  +VFD M ERN V+W+++I      G  NDA  LF +
Sbjct: 308 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR 367

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M +SG K N     +IL A +    + +G+     +    +  D+   + +VD+ S+ G 
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGM 427

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNG 676
           +E A ++  S+    N   + ALL G
Sbjct: 428 VEEAHQVFRSL-LERNEVSYNALLAG 452


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/728 (32%), Positives = 392/728 (53%), Gaps = 3/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +  GL  D  A   LI+ YA+ G ++ +R VF+     D+  W  ++  Y  N  
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE++ LYH+M       + ++  SVL AC+       G  VH ++ K G   + V+  +
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y  FG L  A +VF +M   D V+++++I+ +    +    L++F  M   G  PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT+ SL  AC  +  L   + +H ++L+  +  D  +  S + +Y KCG ++ A   F 
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
             ++     W  M+  Y +     K+ + F +M+     PN  T   +L +C   G +  
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H   I+ G   +  Y+   LI+ Y++ G + +  +++  +  ++++SW  +I+ Y 
Sbjct: 364 GEQIHLLSIKTGFESDM-YVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCKDEF 434
           +    KEALE    MQ +G+ PD+  +AS++SAC  + +++ G QIH  V +     D  
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS 482

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++L+++Y++CG    A+ LFE I+ K  + WN M+ GF Q+G   EA+ +F +MY   
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG 542

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ +  TF+++I A +N+  +++GK +H  +I  G   +  +  AL  +Y KCG ++ A+
Sbjct: 543 VKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAK 602

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             F  MSERN VSW+ +I     HG   +A  LF QM   G+KPN+VTF+ +L ACSH G
Sbjct: 603 MQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 662

Query: 615 SVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            VEEG  YF +M    G+ P   HYAC+VD+L R+G ++ A K +  MP  AN  +W  L
Sbjct: 663 LVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTL 722

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CR+HK I++ +   K L     +D+  Y LLSN YA  G W     VR +M+  G++
Sbjct: 723 LSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVR 782

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 783 KEPGRSWI 790



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 222/414 (53%), Gaps = 1/414 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  +L K  +LH++LL  G+  D      L++ Y + G +  +  +F +    +  +W +
Sbjct: 256 SIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNL 315

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  Y   +   +S  L+ +M+      + F YP +LR C+  G++  GE++H   IK G
Sbjct: 316 MLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTG 375

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F+ D  +   ++  Y ++G LD AR++ + + ++DVVSW+S+IA Y  +    E L+ F 
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFK 435

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G+ PD + + S   AC  + ++R  + IH  V       D  + N+ + +Y++CG
Sbjct: 436 DMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCG 495

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
               A   F  IE +   +W  M+S + +SG +++ALE F+KM +   + N+ T ++ + 
Sbjct: 496 RSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSIS 555

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           + A L  +++GK +H  +I+ G   E + +  ALI  Y +CG + + +     + ERN +
Sbjct: 556 ASANLADIKQGKQIHATVIKTGCTSETE-VANALISLYGKCGSIEDAKMQFFEMSERNHV 614

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           SWN +I+  ++ G   EAL+L  QM+  GL P+  +    L+AC +VG ++ GL
Sbjct: 615 SWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL 668



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 1/206 (0%)

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC-SNIGQLEK 517
           + +++    N  + GF  + +  + ++LF      C  +  V F  A++ C  ++     
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
              +H K I+ G+ +D      L D+YAK G +Q A+RVF+ +S R+ VSW AM+  Y  
Sbjct: 61  VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
           +G   +A  L+ QM  SG+ P      ++L AC+ +   E+G+     +   G   +   
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPF 663
              ++ L  R G +  A ++   MP+
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPY 206


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/749 (32%), Positives = 400/749 (53%), Gaps = 10/749 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD--TF 55
           M + + C  ++ L    ++H H++      D      LI  Y + GS+  +R V+   ++
Sbjct: 27  MKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSY 86

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            E     W  ++  Y+   + E+++ L  +M +           S L +C S G L  G 
Sbjct: 87  MERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGR 146

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H + ++ G   D  +   IL  Y + G +++AR+VFDKM  + VVSW+  I  Y D  
Sbjct: 147 EIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
                 ++F  M +EGV P+ +T +S+  A     +L+  +++H  +L    + D  +G 
Sbjct: 207 RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGT 266

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY+KCG      + F K+  R   +W  MI      G++++A E + +M      P
Sbjct: 267 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP 326

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N IT + +L +C     L  GK +H ++ + G   +   +  ALI  Y+ CG + +   V
Sbjct: 327 NKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG-VQNALISMYSRCGSIKDARLV 385

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  ++++SW  +I   A+ G   EAL +  +MQ  G+ P+  +  S L+AC +  +L
Sbjct: 386 FDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAAL 445

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G +IH  V++     D  V ++L++MYS CG    A  +F+R+ Q+ +V +N+MI G+
Sbjct: 446 EWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGY 505

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
             +    EA+ LF ++    L+ D+VT++  + AC+N G LE  + +H  +   G   D 
Sbjct: 506 AAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDT 565

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            +  AL   YAKCG    A  VF+ M++RNV+SW+A+I     HG+  DA  LF++M   
Sbjct: 566 SVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKME 625

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
           G+KP+ VTF+++L ACSH+G +EEG+ YF +M + F + P ++HY CMVDLL R+G ++ 
Sbjct: 626 GVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDE 685

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG-YYTLLSNIYA 712
           A  +I +MPF AN  IWGALL  CRIH  + V +    E S+    DN   Y  LS++YA
Sbjct: 686 AEALIKTMPFQANTRIWGALLGACRIHGNVPVAER-AAESSLKLDLDNAVVYVALSHMYA 744

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G WD   K+R +ME  G+ K PG S I
Sbjct: 745 AAGMWDSAAKLRKLMEQRGVTKEPGRSWI 773



 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 190/608 (31%), Positives = 330/608 (54%), Gaps = 6/608 (0%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           ++ A +++  Y  +L+ C  + DL +G +VH  II+     D     +++  Y + G ++
Sbjct: 16  QQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIE 75

Query: 148 DARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           +AR+V+ K++   R V SW++++  Y     + + LK+   M + G+ PD  T++S   +
Sbjct: 76  EARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSS 135

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C    +L   R IH   ++  +  D  + N  + MY+KCG +  A   F K+EK+   SW
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSW 195

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           T  I  Y   G  + A E F KM +    PN IT I+VL + +    L+ GK+VH +I+ 
Sbjct: 196 TITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILN 255

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G   +   +G AL++ YA+CG   +C +V   +  R++++WN +I   A  G  +EA E
Sbjct: 256 AGHESD-TAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASE 314

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYS 444
           +  QMQ  G+MP+  +    L+AC N  +L  G +IH  V K     D  VQ++LI MYS
Sbjct: 315 VYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYS 374

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           +CG    A L+F+++ +K V+ W +MI G  ++G   EA+ ++ +M    +E + VT+ +
Sbjct: 375 RCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTS 434

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + ACS+   LE G+ +H +++  G+  D ++   L +MY+ CG ++ A++VFD M +R+
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRD 494

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +V+++AMI  Y  H    +A  LF ++ + G+KP++VT++N+L AC++SGS+E  +    
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHT 554

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR-I 683
            +R  G   D      +V   ++ G    A  +   M    N   W A++ G   H R  
Sbjct: 555 LVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHGRGQ 613

Query: 684 DVMKTIEK 691
           D ++  E+
Sbjct: 614 DALQLFER 621



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 165/316 (52%), Gaps = 6/316 (1%)

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLID 441
           A++++  +Q  G   +S      L  C  V  L  G Q+H H+I+     D++  ++LI+
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 442 MYSKCGFKNLAYLLFERIQ--QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           MY +CG    A  +++++   +++V  WN+M+ G+ Q G   +A+ L  QM  + L  D 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            T ++ + +C + G LE G+ +H + +  G+  D+ +   + +MYAKCG ++ A+ VFD 
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
           M +++VVSW+  I  Y   G+   A  +F++M   G+ PN +T++++L A S   +++ G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSG---DIEGAFKMIHSMPFPANGSIWGALLNG 676
           K   + +   G E D      +V + ++ G   D    F+ + +    A  ++ G L  G
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 677 CRIHKRIDVMKTIEKE 692
               +  +V   +++E
Sbjct: 307 GYWEEASEVYNQMQRE 322


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/733 (33%), Positives = 397/733 (54%), Gaps = 3/733 (0%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           +++ ++HA +LV G++      +R++  Y    S +    +F   +   S  W  LI+ +
Sbjct: 93  QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
                F+ +++ + +M+        + +P V++AC  L ++   + VH      GF  D 
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            I +S++  Y + G + DA+ +FD++  RD + W+ ++  Y  N D +  L  F  M   
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
            V+P+ V+ + L   C     +R    +HG V+R   + D  + N+ I MYSKCG+L  A
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
            + F  + +  T +W  +I+ Y ++G+  +A+  F  M+    + + IT  + L S    
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKS 392

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G L+  K VH  I+R G+ P   YL  AL++ Y + G +    K        ++     +
Sbjct: 393 GSLKYCKEVHSYIVRHGV-PFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAM 451

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           IS Y   G++ EAL L   +   G++P+  ++AS L AC  + SL+LG ++H  ++K   
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGL 511

Query: 431 KDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           ++   V SS+  MY+K G  +LAY  F R+  K  V WN MI  F QNG    AI+LF Q
Sbjct: 512 ENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQ 571

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M  +  + D V+    + AC+N   L  GK +H  ++      D ++ + L DMY+KCG 
Sbjct: 572 MGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGK 631

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A+ VFD M  +N VSW+++I  YG HG+  +   LF +M+++GI+P+ VTF+ I+ A
Sbjct: 632 LALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSA 691

Query: 610 CSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           C H+G V+EG +YF  M   +G+   ++H+ACMVDL  R+G +  AF  I SMPF  +  
Sbjct: 692 CGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAG 751

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
            WG+LL  CR+H  +++ K   K L     N++GYY LLSN++A  G W+   KVRS+M+
Sbjct: 752 TWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMK 811

Query: 729 VTGLKKVPGYSTI 741
             G++K+PGYS I
Sbjct: 812 EKGVQKIPGYSWI 824



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 191/429 (44%), Gaps = 34/429 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +L+    +H++++  G+ +D    + L++ Y + G +  +   F      D 
Sbjct: 386 LPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDV 445

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +   +I  Y+ N    E++ L+  +I+E    +     SVL AC++L  L  G+++H  
Sbjct: 446 AVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCD 505

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K G +    + +SI   Y + G LD A + F +M  +D V W+ +I S+  N      
Sbjct: 506 ILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELA 565

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G + D V++ +   AC    +L   + +H  V+R     D  + ++ I M
Sbjct: 566 IDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDM 625

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG L  A   F  ++ +   SW ++I+ Y   G  ++ L+ F +M+E   +P+ +T 
Sbjct: 626 YSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTF 685

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + ++ +C   G + EG                 Y    + E Y  C +M           
Sbjct: 686 LVIMSACGHAGLVDEGI----------------YYFRCMTEEYGICARMEH--------- 720

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
                 +  ++  Y R G   EA + +  M      PD+ +  S L AC   G+++L   
Sbjct: 721 ------FACMVDLYGRAGRLHEAFDTIKSMP---FTPDAGTWGSLLGACRLHGNVELAKL 771

Query: 421 IHGHVIKID 429
              H++++D
Sbjct: 772 ASKHLVELD 780


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/747 (31%), Positives = 414/747 (55%), Gaps = 9/747 (1%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C+N   LR+  ++HA L+V  +  D     R++  YA  GS      +F       
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 60  SFM--WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           S +  W  +I  ++ N    +++  Y KM+    +     +P +++AC +L +    + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
              +   G D ++ + +S++  Y E+G +D   K+FD++  +D V W+ ++  Y     +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
              +K F  M  + + P+ VT   +   C     +     +HG V+   +  +G + NS 
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MYSKCG    A + F  + +  T +W  MIS Y +SG  +++L  F +M+     P+ 
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           IT  ++L S +    L   K +HC I+R  +  +  +L  ALI+ Y +C  +S  + +  
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI-FLTSALIDAYFKCRGVSMAQNIFS 399

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                +++ +  +IS Y   G+  ++LE+   +    + P+  ++ S L   G + +L+L
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G ++HG +IK    +   +  ++IDMY+KCG  NLAY +FER+ ++ +V WNSMI    Q
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           + N   AI++F QM ++ +  D V+   A+ AC+N+     GK +H  +I + +  D+Y 
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SG 595
           ++ L DMYAKCG+L+ A  VF +M E+N+VSW+++I   G HG+L D+  LF +M++ SG
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           I+P+++TF+ I+ +C H G V+EG  +F +M   +G++P  +HYAC+VDL  R+G +  A
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           ++ + SMPFP +  +WG LL  CR+HK +++ +    +L     +++GYY L+SN +A  
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             W+   KVRS+M+   ++K+PGYS I
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWI 786



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 179/354 (50%), Gaps = 14/354 (3%)

Query: 278 FQKALESFVKMLEVK------EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           F  A+  + K L ++      EE     L  +L +C+    LR+GK VH  +I   +  +
Sbjct: 10  FAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGD 69

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGER--NILSWNMLISEYARKGMSKEALELLVQ 389
             Y    ++  YA CG  S+C K+ + +  R  +I  WN +IS + R G+  +AL    +
Sbjct: 70  -SYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFK 128

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKC 446
           M  +G+ PD  +    + AC  + + + G+      +    +DC +EFV SSLI  Y + 
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVSSLGMDC-NEFVASSLIKAYLEY 186

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  ++   LF+R+ QK  V+WN M+ G+ + G     I  F  M ++ +  + VTF   +
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
             C++   ++ G  +H  ++  GV  +  I  +L  MY+KCG    A ++F  MS  + V
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV 306

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           +W+ MI  Y   G + ++ + F +M+ SG+ P+ +TF ++L + S   ++E  K
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 183/361 (50%), Gaps = 3/361 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      NL    ++H +++   +  D   ++ LI++Y +   +  ++ +F      D 
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            ++  +I  Y+ N  + +S+ ++  +++ + + +     S+L     L  L  G ++HG 
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK GFD    I  +++  Y + G ++ A ++F++++ RD+VSW+S+I     + + S  
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G+  D V++ +   AC  L S    ++IHG +++  +  D    ++ I M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
           Y+KCG+L +A   F  ++++   SW ++I+     G  + +L  F +M+E     P+ IT
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + ++ SC  +G + EG      +    G+ P+ ++    +++ +   G+++E  + + +
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA-CVVDLFGRAGRLTEAYETVKS 705

Query: 359 I 359
           +
Sbjct: 706 M 706


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/745 (33%), Positives = 394/745 (52%), Gaps = 7/745 (0%)

Query: 3   LFRSCTN----LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           + R+C+     +R   ++HA ++  GL   P  S  LI  YA+ G + S+R VFD     
Sbjct: 117 VLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTK 176

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           DS  W  +I  +  N + EE+I L+ +M       + +++ SVL  C+ +     GE++H
Sbjct: 177 DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLH 236

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             + K G   +  +  +++  Y        A KVF KM S+D VS++S+I+         
Sbjct: 237 ALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSD 296

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L++F  M R+ ++PD VT+ SL  AC    +L     +H +V++  I  D  +  + +
Sbjct: 297 GALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALL 356

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y  C D+ +A   F+  +      W  M+  + +     ++   F +M      PN  
Sbjct: 357 DLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQF 416

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  ++L +C  +G L  G+ +H Q+I+ G      Y+   LI+ YA+ GK+     ++  
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV-YVCSVLIDMYAKHGKLDTAHVILRT 475

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E +++SW  LIS YA+  +  EAL+   +M   G+  D+   +S++SAC  + +L  G
Sbjct: 476 LTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG 535

Query: 419 LQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            QIH    +    +D  + ++L+ +Y++CG    AYL FE+I  K  + WN +I GF Q+
Sbjct: 536 RQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQS 595

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G   +A+ +F QM    LE    TF +A+ A +NI  +++GK +H  +I  G   DI + 
Sbjct: 596 GYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVS 655

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL   YAKCG ++ A+R F  M E+N VSW+AMI  Y  HG  N+A +LF++M   G  
Sbjct: 656 NALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEM 715

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PN VTF+ +L ACSH G V +G  YF +M +  G+ P   HYAC+VDL+SR+G +  A K
Sbjct: 716 PNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARK 775

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
            I  MP   + +IW  LL+ C +HK ++V +   + L      D+  Y LLSN+YA  G 
Sbjct: 776 FIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGK 835

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
           WD   + R +M   G+KK PG S I
Sbjct: 836 WDCRDQTRQMMRNRGVKKEPGRSWI 860



 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/675 (27%), Positives = 338/675 (50%), Gaps = 6/675 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L +  +LH  +L  G   +     +L++ Y  +G L     VF+         W  +I 
Sbjct: 25  SLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIIS 84

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS--LGDLGSGEKVHGRIIKCGF 126
            +M        + L+  MI E  + +   + SVLRACS   +G +   E++H RII  G 
Sbjct: 85  GFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIG-IRYAEQIHARIICHGL 143

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
               +I   ++  Y + G +  ARKVFD + ++D VSW ++I+ +  N    E + +F  
Sbjct: 144 LCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCE 203

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G+ P      S+   C ++        +H  V +    ++  + N+ + +YS+  +
Sbjct: 204 MHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPN 263

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
            +SAE+ F K++ +   S+ ++IS   + G+   ALE F KM     +P+ +T+ ++L +
Sbjct: 264 FVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSA 323

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA  G L +G+ +H  +I+ G+  +    G AL++ Y  C  +    ++       N++ 
Sbjct: 324 CASNGALCKGEQLHSYVIKAGISSDMIVEG-ALLDLYVNCSDIKTAHEMFLTAQTENVVL 382

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN+++  + +     E+  +  QMQ  GL+P+ F+  S L  C +VG+L LG QIH  VI
Sbjct: 383 WNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVI 442

Query: 427 KIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K   + + +V S LIDMY+K G  + A+++   + +  VV W ++I G+ Q+    EA+ 
Sbjct: 443 KTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALK 502

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
            F +M    ++ D + F +AI AC+ I  L +G+ +H +    G  +D+ I  AL  +YA
Sbjct: 503 HFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYA 562

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           +CG ++ A   F+ +  ++ +SW+ +I  +   G   DA  +F QM  + ++ +  TF +
Sbjct: 563 RCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGS 622

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
            + A ++  ++++GK     +   G + D++    ++   ++ G IE A +    MP   
Sbjct: 623 AVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP-EK 681

Query: 666 NGSIWGALLNGCRIH 680
           N   W A++ G   H
Sbjct: 682 NDVSWNAMITGYSQH 696



 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 180/582 (30%), Positives = 307/582 (52%), Gaps = 6/582 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L  C + G L   +K+HG+I+K GF  + V+   ++  Y   G LD   KVF+ M 
Sbjct: 13  YIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMP 72

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPAR 216
           +R V SW  II+ + +    +  L +F  M+ E V P  ++  S+  AC G    +R A 
Sbjct: 73  NRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAE 132

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            IH  ++   +     + N  I +Y+K G ++SA + F  +  + + SW AMIS ++++G
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + ++A+  F +M      P      +VL  C  +     G+ +H  + + G   E  Y+ 
Sbjct: 193 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE-TYVC 251

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL+  Y+        EKV   +  ++ +S+N LIS  A++G S  ALEL  +M+   L 
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           PD  +VAS LSAC + G+L  G Q+H +VIK     D  V+ +L+D+Y  C     A+ +
Sbjct: 312 PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F   Q ++VV+WN M+  F +  N  E+  +F QM +  L  ++ T+ + ++ C+++G L
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + G+ +H ++I  G + ++Y+ + L DMYAK G L TA  +  +++E +VVSW+A+I  Y
Sbjct: 432 DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGY 491

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
             H    +A   FK+ML+ GI+ + + F + + AC+   ++ +G+       + G   DL
Sbjct: 492 AQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDL 551

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI-WGALLNG 676
                +V L +R G I+ A+  +      A  SI W  L++G
Sbjct: 552 SIGNALVSLYARCGRIKEAY--LEFEKIDAKDSISWNGLISG 591



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 268/527 (50%), Gaps = 8/527 (1%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G+  +  T + L + C    SL   + +HG +L+     +  L N  + +Y   GD
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L    + F  +  R   SW  +IS +       + L+ F  M+E    P  I+  +VL +
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 307 CAG--LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
           C+G  +G +R  + +H +II  G+        P LI  YA+ G +    KV   +  ++ 
Sbjct: 121 CSGHRIG-IRYAEQIHARIICHGLLCSPIISNP-LIGLYAKNGLIISARKVFDNLCTKDS 178

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SW  +IS +++ G  +EA+ L  +M T G+ P  +  +S LS C  +    +G Q+H  
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238

Query: 425 VIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           V K     E +V ++L+ +YS+      A  +F ++Q K  V +NS+I G  Q G S  A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + LF +M  + L+ D VT  + + AC++ G L KG+ +H  +I  G+  D+ ++ AL D+
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y  C D++TA  +F +    NVV W+ M+  +G    L+++  +F+QM   G+ PN+ T+
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +IL  C+  G+++ G+     +   G + ++   + ++D+ ++ G ++ A  ++ ++  
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE 478

Query: 664 PANGSIWGALLNGCRIHKRI-DVMKTIEKELSVTGTNDN-GYYTLLS 708
               S W AL++G   H    + +K  ++ L+    +DN G+ + +S
Sbjct: 479 DDVVS-WTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAIS 524


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/649 (35%), Positives = 380/649 (58%), Gaps = 5/649 (0%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           + +P V++ C+ L ++  G+ +   I++ GFD D  + +S++  Y + GC++DAR+ FDK
Sbjct: 11  YTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDK 70

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS-LAEACGELCSLRP 214
           M  +D V W+ +I  Y    +    +K+F  M+    +PD VT    L+ +C E   +  
Sbjct: 71  MIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE-AMVEY 129

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R +HG V+R  +     +GN+ + +YSK   L  A + F  + +     W  MI  Y +
Sbjct: 130 GRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQ 189

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G+   A   F +M+    +P+ IT  + L S A    L++ K +H  I+R G+  +  Y
Sbjct: 190 NGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDV-Y 248

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           L  ALI+ Y +C       K+ +   + +I+ +  +IS Y   GM+K+ALE+   +    
Sbjct: 249 LNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKK 308

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAY 453
           ++P++ + +S L AC  + +++LG ++HG++IK + +++  V S++++MY+KCG  +LA+
Sbjct: 309 MIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAH 368

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           L+F RI  K  + WNS+I  F Q+G   EAI LF QM +  ++ D VT   A+ AC+NI 
Sbjct: 369 LIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIP 428

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  GK +H  +I      D++  +AL +MYAKCG L  A+ VF+ M E+N V+W+++I 
Sbjct: 429 ALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIA 488

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            YG HG L D+ +LF  ML+ GI+P+ +TF+ IL +C H+G VE+G  YF  M   +G+ 
Sbjct: 489 AYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIP 548

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
             ++HYACM DL  R+G ++ AF++I SMPFP   S+WG LL  CR+H  +++ +   + 
Sbjct: 549 AQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRY 608

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L      ++GYY LL+++ A+ G W    K++ +M+  G++KVPG S I
Sbjct: 609 LLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWI 657



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 181/598 (30%), Positives = 317/598 (53%), Gaps = 7/598 (1%)

Query: 2   PLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           P+ + CT   N+R    +   +L  G   D   ++ LI+ YA+ G +  +R  FD   + 
Sbjct: 15  PVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDK 74

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D  +W V+I  Y+     + +I L+  M+  +A   +  +  VL    S   +  G ++H
Sbjct: 75  DCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLH 134

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G +++ G D   ++  +++  Y +   L DARK+FD M   D+V W+ +I  Y  N  + 
Sbjct: 135 GLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMD 194

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           +   +F+ M+  G++PD +T  S   +  E  SL+  + IHG+++R  + +D  L ++ I
Sbjct: 195 DASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALI 254

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y KC D + A + F    K     +TAMIS Y  +G  + ALE F  +L+ K  PN +
Sbjct: 255 DLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNAL 314

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  ++L +CAGL  ++ G+ +H  II+  +  E   +G A++  YA+CG++     +   
Sbjct: 315 TFSSILPACAGLAAIKLGRELHGYIIKNEL-EEKCPVGSAIMNMYAKCGRLDLAHLIFGR 373

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I  ++ + WN +I+ +++ G  +EA+ L  QM   G+  D  +V+++LSAC N+ +L  G
Sbjct: 374 ISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYG 433

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            +IHG +IK   + D F  S+LI+MY+KCG  N+A L+F  +Q+K+ V WNS+I  +  +
Sbjct: 434 KEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYH 493

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYI 536
           G   +++ LFH M    ++ D +TFLT + +C + GQ+E G ++       YG+   +  
Sbjct: 494 GYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEH 553

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLD 593
              + D++ + G L  A  V  SM      S W  ++    +HG +  A    + +LD
Sbjct: 554 YACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLD 611



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/520 (23%), Positives = 244/520 (46%), Gaps = 47/520 (9%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P     ++L+++  +H +++  G+  D   ++ LI+ Y +      +  +F+   + D 
Sbjct: 219 LPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDI 278

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            ++  +I  Y+ N   ++++ ++  +++++   +   + S+L AC+ L  +  G ++HG 
Sbjct: 279 VIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGY 338

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK   ++   + ++I+  Y + G LD A  +F +++ +D + W+SII S+  +    E 
Sbjct: 339 IIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEA 398

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M  EGV+ D VT+ +   AC  + +L   + IHG +++   + D    ++ I M
Sbjct: 399 IYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINM 458

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L  A   F  ++++   +W ++I+ Y   G+   +L  F  MLE   +P+ IT 
Sbjct: 459 YAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITF 518

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +T+L SC   G + +G +   C     G+        PA +E YA    +          
Sbjct: 519 LTILSSCGHAGQVEDGVRYFRCMTEEYGI--------PAQMEHYACMADL---------- 560

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV-ASSLSACGNVGSLQLG 418
                         + R G   EA E++  M      P + SV  + L AC   G+++L 
Sbjct: 561 --------------FGRAGHLDEAFEVITSMP----FPPAASVWGTLLGACRVHGNVELA 602

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCG----FKNLAYLLFERIQQK----SVVMWNSM 470
                +++ ++ K+      L  + +  G       + +L+ ER  QK    S +  N+ 
Sbjct: 603 EVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNT 662

Query: 471 ICGFY-QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            C F+  +G+  E+  ++  +    LE+ +V ++    AC
Sbjct: 663 TCVFFAADGSHPESPQIYSLLKSLLLELRKVGYVPQAVAC 702



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 148/288 (51%), Gaps = 5/288 (1%)

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           G+ PD ++    +  C  + +++LG  I   ++++    D FV SSLI +Y+  G    A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
              F+++  K  V+WN MI G+ Q G S  AI LF  M  +  + D VTF   +    + 
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             +E G+ +H  ++  G+     +   L  +Y+K   L  A+++FD M + ++V W+ MI
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             Y  +G ++DA+ LF +M+ +GIKP+ +TF + L + + S S+++ K     +   GV 
Sbjct: 185 GGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI 244

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIH-SMPFPA---NGSIWGALLNG 676
            D+   + ++DL  +  D   A KM + S  F        I G +LNG
Sbjct: 245 LDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNG 292


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/739 (34%), Positives = 408/739 (55%), Gaps = 12/739 (1%)

Query: 9   NLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKE-PDSFMWAV 65
           +L +  ++HA  ++ G L         LI +YA+     S   +F+ TF+    +F+W  
Sbjct: 69  SLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNT 128

Query: 66  LIKCY--MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           LI+ +   WN  F+     Y++M+R    + +  +P VL+ CS   D+  G +VHG + K
Sbjct: 129 LIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFK 187

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            GFD D  +  ++L  YG  G L+DAR++FD+M  RDVVSW++II     N D +E    
Sbjct: 188 LGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNY 247

Query: 184 FHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +  M+ R  ++P+ V+++SL      L      R IH + ++  +       N+ +  Y 
Sbjct: 248 YFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYG 307

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG + +  + F +  ++   SW ++I+     G    AL +F  M++   +PN +T+ +
Sbjct: 308 KCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISS 367

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE 361
           +L     L   + GK +H   +R  MG E D ++  +LI+ YA+ G  +E   + H +  
Sbjct: 368 ILPVLVELECFKAGKEIHGFSMR--MGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDR 425

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           RNI+SWN +I+ YA   +  EA+  ++QMQ  G  P++ +  + L AC  +G L  G +I
Sbjct: 426 RNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEI 485

Query: 422 HGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H   ++I    D FV +SLIDMY+KCG  + A  +F    +K  V +N +I G+ +  + 
Sbjct: 486 HAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDC 544

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           L+++NLF +M L   + D V+F+  I AC+N+  L++GK VH   +   +   +++  +L
Sbjct: 545 LQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSL 604

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            D Y KCG +  A R+F+ +  ++V SW+ MI  YGM G+L  A S+F+ M D  ++ + 
Sbjct: 605 LDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDL 664

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           V+++ +L ACSH G VE G  YF+ M    +EP   HY CMVDLL R+G +E A K+I  
Sbjct: 665 VSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQ 724

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           +P   + +IWGALL  CRI+  +++ +   + L        GYY LLSNIYAE G WDE 
Sbjct: 725 LPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEA 784

Query: 721 GKVRSIMEVTGLKKVPGYS 739
            K+R +M+  G KK PG S
Sbjct: 785 NKIRELMKSRGAKKNPGCS 803



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 299/593 (50%), Gaps = 21/593 (3%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFD 154
           +I+ ++L  CS +  L   ++VH   I  GF    V +  S++  Y +F        +F+
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 155 K--MTSRDVVSWSSIIASYFDNADVS-EGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +     R    W+++I ++    + + +G + ++ MVR GV+ D  T   + + C +   
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFD 174

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           +     +HG V +     D  +GN+ +++Y  CG L  A R F ++ +R   SW  +I  
Sbjct: 175 ICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGL 234

Query: 272 YNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            + +G + +A   +  M L    +PNL+++I++L   A L      + +HC  ++ G+  
Sbjct: 235 LSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDS 294

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +      AL++ Y +CG +    +V +   E+N +SWN +I+  A KG   +AL     M
Sbjct: 295 QVTTCN-ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMM 353

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
              G  P+S +++S L     +   + G +IHG  +++  + D F+ +SLIDMY+K G  
Sbjct: 354 IDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHS 413

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A  +F  + ++++V WN+MI  +  N   LEAI    QM       + VTF   + AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           + +G L  GK +H   +  G+  D+++  +L DMYAKCG L +A+ VF++ S ++ VS++
Sbjct: 474 ARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYN 532

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
            +I  Y        + +LF +M   G KP+ V+F+ ++ AC++  ++++GK       + 
Sbjct: 533 ILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGK------EVH 586

Query: 630 GVEPDLQHYA------CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           GV      Y+       ++D  ++ G I+ A ++ + + F    S W  ++ G
Sbjct: 587 GVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVAS-WNTMILG 638



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 232/481 (48%), Gaps = 6/481 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+  +  +     R+H + +  GL         L+++Y + GS+++   VF+   E + 
Sbjct: 268 LPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 327

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I          +++  +  MI   A  ++    S+L     L    +G+++HG 
Sbjct: 328 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 387

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ G + D  I  S++  Y + G   +A  +F  +  R++VSW+++IA+Y  N    E 
Sbjct: 388 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 447

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++    M   G  P+ VT  ++  AC  L  L P + IH   +R  +  D  + NS I M
Sbjct: 448 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 507

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L SA   F    ++   S+  +I  Y+ +    ++L  F +M  + ++P++++ 
Sbjct: 508 YAKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 566

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + V+ +CA L  L++GK VH   +R  +   + ++  +L++FY +CG++    ++ + I 
Sbjct: 567 VGVISACANLAALKQGKEVHGVALRNHL-YSHLFVSNSLLDFYTKCGRIDIACRLFNQIL 625

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +++ SWN +I  Y   G  + A+ +   M+   +  D  S  + LSAC + G ++ G Q
Sbjct: 626 FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQ 685

Query: 421 IHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQ 476
               ++    +  E   + ++D+  + GF   A  L +++       +W +++  C  Y 
Sbjct: 686 YFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYG 745

Query: 477 N 477
           N
Sbjct: 746 N 746


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/677 (35%), Positives = 373/677 (55%), Gaps = 6/677 (0%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT+   L+   + HA +LV G+ Y+    T+L+  Y   G+   ++ +F   +   
Sbjct: 52  ILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I+ +     F+ ++L Y KM+        + +P V++AC  L  +  G  VH 
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +I   GF+ D  + +S++  Y E GC+ DAR +FD+M S+D V W+ ++  Y  N D   
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              +F  M R    P+ VT   +   C     +     +HG V+   +++D P+ N+ + 
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG L  A R F  + K    +W  MIS Y ++G+  +A   F +M+    +P+ IT
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSIT 351

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + L   +    LR+GK +HC IIR G+  +  +L  ALI+ Y +C  +    K+    
Sbjct: 352 FSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDV-FLKSALIDIYFKCRDVEMAHKIFDQR 410

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              +I+    +IS Y   GM+  ALE+   +    +  +S ++AS L AC  + +L LG 
Sbjct: 411 TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGK 470

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           ++HGH++K       +V S+++DMY+KCG  +LA+  F  I  K  V WNSMI    QNG
Sbjct: 471 ELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNG 530

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EAI+LF QM +   + D V+   A+ AC+N+  L  GK +H  ++    R D++ ++
Sbjct: 531 KPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAES 590

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMY+KCG+L  A RVFD M E+N VSW+++I  YG HG+L D+ +LF  ML  GI+P
Sbjct: 591 ALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQP 650

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + VTF+ I+ AC H+G V+EG  YF  M    G+   ++HYACMVDL  R+G +  AF M
Sbjct: 651 DHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGM 710

Query: 658 IHSMPFPANGSIWGALL 674
           I+SMPF  +  +WG  L
Sbjct: 711 INSMPFSPDAGVWGLYL 727



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 154/586 (26%), Positives = 288/586 (49%), Gaps = 5/586 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+ C+    L  G + H +++  G   + ++ T +L  Y   G   DA+ +F ++   
Sbjct: 51  SILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
               W+ +I  +         L  +  M+  G  PD  T   + +ACG L S+   R +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             +     ++D  +G+S I  YS+ G +  A   F ++  +    W  M++ Y ++G + 
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPA 338
            A   F++M   +  PN +T   VL  CA    +  G  +H  ++  G+  E D  +   
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL--EMDSPVANT 288

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L+  YA+CG + +  ++   + + ++++WN +IS Y + G   EA  L  +M + G+ PD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPD 348

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
           S + +S L       +L+ G +IH ++I+     D F++S+LID+Y KC    +A+ +F+
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFD 408

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           +     +V+  +MI G+  NG +  A+ +F  +    +  + VT  + + AC+ +  L  
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  ++  G     Y+ +A+ DMYAKCG L  A + F  +S ++ V W++MI     
Sbjct: 469 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQ 528

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
           +G+  +A  LF+QM  +G K + V+    L AC++  ++  GK     M       DL  
Sbjct: 529 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFA 588

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            + ++D+ S+ G+++ A ++   M    N   W +++     H R+
Sbjct: 589 ESALIDMYSKCGNLDLACRVFDMME-EKNEVSWNSIIAAYGNHGRL 633



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 259/511 (50%), Gaps = 8/511 (1%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           + + P  V++L   + C +   L   R  H  +L   I  +G LG   + MY  CG  L 
Sbjct: 43  DSLAPQLVSIL---QTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD 99

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A+  F ++   C+  W  MI  +   G F  AL  + KML     P+  T   V+ +C G
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGG 159

Query: 310 LGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
           L  +  G+ VH +I  + MG E D ++G +LI+FY+E G + +   +   +  ++ + WN
Sbjct: 160 LNSVALGRVVHDKI--QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWN 217

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
           ++++ Y + G    A  + ++M+     P+S + A  LS C +   +  G Q+HG V+  
Sbjct: 218 VMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS 277

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
             + D  V ++L+ MY+KCG    A  LF+ + +  +V WN MI G+ QNG   EA  LF
Sbjct: 278 GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLF 337

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
           H+M    ++ D +TF + +   S    L +GK +H  +I  GV  D+++ +AL D+Y KC
Sbjct: 338 HEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKC 397

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            D++ A ++FD  +  ++V  +AMI  Y ++G  N+A  +F+ +L   ++ N VT  ++L
Sbjct: 398 RDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVL 457

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+   ++  GK     +   G        + ++D+ ++ G ++ A +    +    + 
Sbjct: 458 PACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISX-KDA 516

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
             W +++  C  + + +    + +++ + GT
Sbjct: 517 VCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 547



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 176/360 (48%), Gaps = 2/360 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL      LR+   +H +++  G+  D    + LI+ Y +   +  +  +FD     D 
Sbjct: 356 LPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDI 415

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +   +I  Y+ N     ++ ++  +++E+   ++    SVL AC+ L  L  G+++HG 
Sbjct: 416 VVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGH 475

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K G      + ++I+  Y + G LD A + F  ++ +D V W+S+I S   N    E 
Sbjct: 476 ILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEA 535

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G + D V++ +   AC  L +L   + IH  ++R   + D    ++ I M
Sbjct: 536 IDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDM 595

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG+L  A R F  +E++   SW ++I+ Y   G  + +L  F  ML    +P+ +T 
Sbjct: 596 YSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 655

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++ +C   G + EG     C     G+    ++    +++ +   G+++E   +I+++
Sbjct: 656 LAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA-CMVDLFGRAGRLNEAFGMINSM 714


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/648 (35%), Positives = 367/648 (56%), Gaps = 3/648 (0%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           + F +PSVL+AC+   DL  G++VHG ++  GFD D+ +  S++  Y + G   DAR +F
Sbjct: 9   NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D +  R VVSW+++ + Y  +    E + +FH MV  G+ P+  ++ S+   C  L    
Sbjct: 69  DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV 128

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             R IHG++++     D    N+ + MY+K G L  A   F +I K    SW A+I+   
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
              +  +ALE   +M +    PN+ TL + L +CAG+     G+ +H  +I+  MG +  
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSD-S 247

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +LG  LI+ Y++C  M +   V   + ER++++WN +IS +++    +EA  L   M T 
Sbjct: 248 FLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTE 307

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           G+  +  ++++ L +   + +  +  QIH   +K   + D +V +SLID Y KCG    A
Sbjct: 308 GIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDA 367

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +FE      +V++ S++  + Q+G   EA+ L+ +M    ++ D     + + AC+++
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
              E+GK VH  ++ +G   DI+   +L +MYAKCG ++ A   F  +  R +VSWSAMI
Sbjct: 428 SAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMI 487

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGV 631
                HG   +A  LFKQML  G+ PN +T +++L AC+H+G V E K YFN+M+I FG+
Sbjct: 488 GGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGI 547

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           EP  +HYACM+DLL R+G +E A ++++ MPF AN  +WGALL   RIHK ID+ +   +
Sbjct: 548 EPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAE 607

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            L       +G + LL+NIYA  G WD+  +VR +M+   +KK PG S
Sbjct: 608 MLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMS 655



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/587 (28%), Positives = 299/587 (50%), Gaps = 9/587 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT  + L    ++H  ++VTG   D   +  L+  YA+ G    +R +FD   +  
Sbjct: 16  VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRS 75

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  L  CY+ ++   E++ L+H M+      + F   S++  C+ L D   G K+HG
Sbjct: 76  VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHG 135

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +IK G+D D     +++  Y + G L+DA  VFD++   D+VSW++IIA    +     
Sbjct: 136 YLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHR 195

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++   M + G+ P+  T+ S  +AC  +      R +H  +++  +  D  LG   I 
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKC  +  A   F  + +R   +W A+IS ++++   ++A   F  M       N  T
Sbjct: 256 MYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTT 315

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA 358
           L TVL S A L      + +H   ++ G   E+D Y+  +LI+ Y +CG + +  +V   
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGF--EFDNYVVNSLIDTYGKCGHVEDATRVFEE 373

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
               +++ +  L++ YA+ G  +EAL L ++MQ  G+ PDSF  +S L+AC ++ + + G
Sbjct: 374 SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQG 433

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            Q+H H++K     D F  +SL++MY+KCG    A   F RI  + +V W++MI G  Q+
Sbjct: 434 KQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQH 493

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYI 536
           G   EA+ LF QM    +  + +T ++ + AC++ G + + K   + + I +G+      
Sbjct: 494 GYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEH 553

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN 582
              + D+  + G L+ A  + + M  + N + W A++    +H  ++
Sbjct: 554 YACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNID 600



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 261/523 (49%), Gaps = 4/523 (0%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G++ +     S+ +AC     L   + +HG V+      D  + NS +++Y+KCG    A
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              F  I  R   SW A+ SCY  S    +A+  F  M+     PN  +L +++  C GL
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
               +G+ +H  +I+ G   +  +   AL++ YA+ G + +   V   I + +I+SWN +
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDA-FSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           I+          ALELL +M   G+ P+ F+++S+L AC  +   +LG Q+H  +IK+D 
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 431 -KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D F+   LIDMYSKC   + A L+F+ + ++ ++ WN++I G  QN    EA +LF  
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M+   +  ++ T  T +++ + +      + +H   +  G   D Y+  +L D Y KCG 
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGH 363

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A RVF+     ++V +++++  Y   GQ  +A  L+ +M D GIKP+     ++L A
Sbjct: 364 VEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA 423

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           C+   + E+GK     +  FG   D+     +V++ ++ G IE A      +P     S 
Sbjct: 424 CASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS- 482

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
           W A++ G   H        + K++   G   N + TL+S + A
Sbjct: 483 WSAMIGGLAQHGYGKEALQLFKQMLKVGVPPN-HITLVSVLCA 524



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 201/396 (50%), Gaps = 9/396 (2%)

Query: 4   FRSCTN--LRKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            ++C    LR+L R LH+ L+   +  D      LI+ Y++  S+  +RLVF    E D 
Sbjct: 219 LKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDM 278

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  +  N   EE+  L+  M  E    +     +VL++ ++L       ++H  
Sbjct: 279 IAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHAL 338

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +K GF+ D+ +  S++ TYG+ G ++DA +VF++    D+V ++S++ +Y  +    E 
Sbjct: 339 SLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEA 398

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L+++  M   G++PD     SL  AC  L +    + +H H+L+     D   GNS + M
Sbjct: 399 LRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNM 458

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG +  A   F +I  R   SW+AMI    + G+ ++AL+ F +ML+V   PN ITL
Sbjct: 459 YAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITL 518

Query: 301 ITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++VL +C   G + E K   +   I  G+ P  ++    +I+     GK+    ++++ +
Sbjct: 519 VSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYA-CMIDLLGRAGKLEAAMELVNKM 577

Query: 360 G-ERNILSWNMLISE---YARKGMSKEALELLVQMQ 391
             + N L W  L+     +    + ++A E+L+ ++
Sbjct: 578 PFQANALVWGALLGAARIHKNIDLGEQAAEMLLALE 613



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 4/331 (1%)

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGF 448
           M   G+  + F+  S L AC     L LG Q+HG V+      DEFV +SL+ +Y+KCG 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  LF+ I  +SVV WN++   +  +    EA++LFH M L+ +  +E +  + I  
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+ +    +G+ +H  LI  G   D +   AL DMYAK G L+ A  VFD +++ ++VSW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +A+I    +H   + A  L ++M  SG+ PN  T  + L AC+     E G+   +++  
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
             +  D      ++D+ S+   ++ A  +   MP   +   W A+++G   ++  +   +
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMP-ERDMIAWNAVISGHSQNEEDEEAAS 299

Query: 689 IEKELSVTGT--NDNGYYTLLSNIYAEEGNW 717
           +   +   G   N     T+L +I A + N+
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANY 330


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/745 (31%), Positives = 401/745 (53%), Gaps = 7/745 (0%)

Query: 3   LFRSCTN----LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           + R+C+      +   ++HA ++  G    P     LI+ Y++ G +  ++LVF+     
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK 176

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           DS  W  +I     N   +E+ILL+ +M +     + +++ SVL AC+ +     GE++H
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G I+K G   +  +  +++  Y  +G L  A ++F KM  RD +S++S+I+         
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L++F  M  + ++PD VT+ SL  AC  + +    + +H +V++  +  D  +  S +
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y KC D+ +A   F+  E      W  M+  Y + G   ++   F++M      PN  
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  ++L +C  LG L  G+ +H Q+I+ G      Y+   LI+ YA+ G++     ++  
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV-YVCSVLIDMYAKHGELDTARGILQR 475

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E +++SW  +I+ Y +  +  EAL+L  +M+  G+  D+   +S++SAC  + +L  G
Sbjct: 476 LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535

Query: 419 LQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            QIH    I    +D  + ++L+ +Y++CG    AYL FE+I  K  + WN++I GF Q+
Sbjct: 536 QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQS 595

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G+  EA+ +F QM    +E +  TF +A+ A +N   +++GK +H  +I  G   +    
Sbjct: 596 GHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEAS 655

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
             L  +Y+KCG ++ A+R F  M E+NVVSW+AMI  Y  HG  ++A SLF++M   G+ 
Sbjct: 656 NVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLM 715

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PN VTF+ +L ACSH G V EG  YF +M +  G+ P  +HY C+VDLL R+  +  A +
Sbjct: 716 PNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCARE 775

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
            I  MP   +  IW  LL+ C +HK I++ +   + L      D+  Y LLSN+YA  G 
Sbjct: 776 FIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGK 835

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
           WD   + R +M+  G+KK PG S I
Sbjct: 836 WDYRDRTRQMMKDRGVKKEPGRSWI 860



 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 195/683 (28%), Positives = 353/683 (51%), Gaps = 7/683 (1%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LF  C N   L    +LHA +  +G   +    +RLI+ Y   G + ++  +FD     +
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS-LGDLGSGEKVH 118
              W  +I   +      + + L+  MI E  T     + SVLRACS         E++H
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            +II  GF    ++   ++  Y + G +D A+ VF+++  +D VSW ++I+    N    
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E + +F  M +  V P      S+  AC ++   +    +HG +++  +  +  + N+ +
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +YS+ G+L++AE+ F K+ +R   S+ ++IS   + G+  +AL+ F KM     +P+ +
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCV 315

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ ++L +CA +G   +GK +H  +I+ GM  +    G +L++ Y +C  +    +    
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEG-SLLDLYVKCFDIETAHEYFLT 374

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
               N++ WN+++  Y + G   E+  + +QMQ  GLMP+ ++  S L  C ++G+L LG
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            QIH  VIK   + + +V S LIDMY+K G  + A  + +R++++ VV W +MI G+ Q+
Sbjct: 435 EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQH 494

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
               EA+ LF +M    +  D + F +AI AC+ I  L +G+ +H +    G  +D+ I 
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL  +YA+CG  Q A   F+ +  ++ +SW+A+I  +   G   +A  +F QM  +G++
Sbjct: 555 NALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVE 614

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            N  TF + + A +++ ++++GK     M   G + + +    ++ L S+ G IE A + 
Sbjct: 615 ANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKRE 674

Query: 658 IHSMPFPANGSIWGALLNGCRIH 680
              MP   N   W A++ G   H
Sbjct: 675 FFEMP-EKNVVSWNAMITGYSQH 696



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 179/589 (30%), Positives = 314/589 (53%), Gaps = 6/589 (1%)

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
           +A +  +++  +   C + G L   +K+H RI K GFD +DV+ + ++  Y   G +D+A
Sbjct: 7   RANVQTYLW--LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC-GE 208
            K+FD + S +V  W+ +I+        S+ L +F  M+ E V PD  T  S+  AC G 
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
               +    IH  ++         + N  I +YSK G +  A+  F ++  + + SW AM
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           IS  +++G   +A+  F +M +    P      +VL +C  +   + G+ +H  I++ G+
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             E  ++  AL+  Y+  G +   E++   +  R+ +S+N LIS  A++G S  AL+L  
Sbjct: 245 SSE-TFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE 303

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCG 447
           +MQ   + PD  +VAS LSAC +VG+   G Q+H +VIK+    D  ++ SL+D+Y KC 
Sbjct: 304 KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF 363

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A+  F   + ++VV+WN M+  + Q GN  E+  +F QM +  L  ++ T+ + ++
Sbjct: 364 DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILR 423

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            C+++G L+ G+ +H ++I  G + ++Y+ + L DMYAK G+L TA+ +   + E +VVS
Sbjct: 424 TCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+AMI  Y  H    +A  LF++M + GI+ + + F + + AC+   ++ +G+       
Sbjct: 484 WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSY 543

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           I G   DL     +V L +R G  + A+     +    N S W AL++G
Sbjct: 544 ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALISG 591



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 252/496 (50%), Gaps = 4/496 (0%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G+  +  T L L E C    SL  A+ +H  + +     +  LG+  I +Y   G+
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + +A + F  I     + W  +IS         + L  F  M+     P+  T  +VL +
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 307 CA-GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           C+ G    +  + +H +II  G G       P LI+ Y++ G +   + V   +  ++ +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNP-LIDLYSKNGHVDLAKLVFERLFLKDSV 179

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SW  +IS  ++ G   EA+ L  QM    ++P  +  +S LSAC  +   +LG Q+HG +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 426 IKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K     E FV ++L+ +YS+ G    A  +F ++ ++  + +NS+I G  Q G S  A+
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF +M L+C++ D VT  + + AC+++G   KGK +H  +I  G+  D+ I+ +L D+Y
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KC D++TA   F +    NVV W+ M+  YG  G L+++  +F QM   G+ PN+ T+ 
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +IL  C+  G+++ G+     +   G + ++   + ++D+ ++ G+++ A  ++  +   
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-E 478

Query: 665 ANGSIWGALLNGCRIH 680
            +   W A++ G   H
Sbjct: 479 EDVVSWTAMIAGYTQH 494


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/778 (31%), Positives = 405/778 (52%), Gaps = 43/778 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTG--------------------LHY-----------D 28
           +F+ C+NL+ +    + HA + VTG                    L+Y           D
Sbjct: 44  IFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRD 103

Query: 29  PPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR 88
             +   +I  YA +G++  ++ +FD+  E D   W  ++ CY+ N F  +SI ++ KM  
Sbjct: 104 VISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRL 163

Query: 89  EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
            +       +  VL+AC+ + D G G +VH   I+ GFD D V  T+++  Y     LD 
Sbjct: 164 LEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDH 223

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A  +F +M  R+ V WS++IA Y  N   +EGLK++  M+ EG+     T  S   +C  
Sbjct: 224 AFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAG 283

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           L +      +H + L+     D  +G + + MY+KC  ++ A + F         S  A+
Sbjct: 284 LSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNAL 343

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I  Y R     +ALE F  + +   + + I+L   L +C+ +    EG  +H   ++ G+
Sbjct: 344 IVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGL 403

Query: 329 GPEYDY---LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
               D+   +   +++ YA+CG + E   +   +  ++ +SWN +I+ + +    +E L 
Sbjct: 404 ----DFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLA 459

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
           L V M    + PD ++  S + AC    +L  G+++HG VIK     D FV S++IDMY 
Sbjct: 460 LFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYC 519

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  + ER+++++ V WNS+I GF        A++ F +M    +  D  T+ T
Sbjct: 520 KCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYAT 579

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +  C+N+  +E GK +H +++   +  D+YI + + DMY+KCG++Q ++ +F+   +R+
Sbjct: 580 VLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRD 639

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            V+WSAMI  Y  HG   DA  LF++M    +KPN   F+++L AC+H G V++G  YF 
Sbjct: 640 YVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFR 699

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            MR  +G++P ++HY+CMVDLL RSG +  A ++I SMPF A+  IW  LL  CR+   +
Sbjct: 700 EMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNV 759

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +V +     L      D+  Y LLSN+YA  G W E  K+RS M+   LKK PG S I
Sbjct: 760 EVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 166/617 (26%), Positives = 299/617 (48%), Gaps = 38/617 (6%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGF------------------------------- 126
           +  + + CS+L  +  G++ H +I   GF                               
Sbjct: 41  FSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMP 100

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
            +D +   +++  Y   G ++ A+ +FD M  RDVVSW+S+++ Y  N    + +++F  
Sbjct: 101 QRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTK 160

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M    ++ D+ T   + +AC  +        +H   ++     D   G + + MYS C  
Sbjct: 161 MRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKK 220

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  A   F ++ +R +  W+A+I+ Y R+  F + L+ +  ML+     +  T  +   S
Sbjct: 221 LDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRS 280

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CAGL     G  +H   ++   G + + +G A ++ YA+C +M +  KV +        S
Sbjct: 281 CAGLSAFELGTQLHAYALKTNFGYD-NIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQS 339

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
            N LI  YAR+    EALE+   +Q   L  D  S++ +L+AC  +     G+Q+HG  +
Sbjct: 340 HNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAV 399

Query: 427 KIDCKDEF---VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           K  C  +F   V ++++DMY+KCG    A L+F+ ++ K  V WN++I    QN +  E 
Sbjct: 400 K--CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + LF  M  + +E D+ TF + ++AC+    L  G  VH ++I  G+  D ++ +A+ DM
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDM 517

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y KCG L  A+++ + + ER  VSW+++I  +    Q  +A S F +ML  G+ P+  T+
Sbjct: 518 YCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTY 577

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
             +L  C++  +VE GK     +    +  D+   + +VD+ S+ G+++ +  M    P 
Sbjct: 578 ATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP- 636

Query: 664 PANGSIWGALLNGCRIH 680
             +   W A++     H
Sbjct: 637 KRDYVTWSAMICAYAYH 653



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 165/354 (46%), Gaps = 33/354 (9%)

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC----------- 346
           +T   +   C+ L  +  GK  H QI   G  P   ++   L++FY +C           
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTV-FVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 347 --------------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                               G M   + +  ++ ER+++SWN ++S Y + G  ++++E+
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSK 445
             +M+   +  D  + A  L AC  +    LGLQ+H   I++    + V  ++L+DMYS 
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C   + A+ +F  + +++ V W+++I G+ +N    E + L+  M    + + + TF +A
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
            ++C+ +   E G  +H   +      D  + TA  DMYAKC  +  A++VF++      
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
            S +A+I  Y    Q+ +A  +F+ +  S +  +E++    L ACS      EG
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 4/144 (2%)

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           ++TF    Q CSN+  +  GK  H ++   G    +++   L   Y KC +L  A  VFD
Sbjct: 38  KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M +R+V+SW+ MI  Y   G +  A  LF  M +  +          L    H  S+E 
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIE- 156

Query: 619 GKFYFNAMRIFGVEPDLQHYACMV 642
               F  MR+  ++ D   +A ++
Sbjct: 157 ---IFTKMRLLEIQHDYATFAVVL 177


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/743 (33%), Positives = 403/743 (54%), Gaps = 12/743 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L  L RLHA    +GL   P  + +L+ +Y+  G    + L F     PD+F+W  L++ 
Sbjct: 28  LIALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRS 87

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF--- 126
           +   + F+ ++  + +M    A  S F  P    A + L  L  G  VH   +K G    
Sbjct: 88  HHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAG 147

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D    + +S++  Y   G L DA K+FD+M  RDVV+W+++++    N +  +G+     
Sbjct: 148 DGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQ 207

Query: 187 MVR----EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           M+R     G  P+  TM S  EACG L  L   R +HG+ ++  I+    + ++   MYS
Sbjct: 208 MIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYS 267

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KC     A   F ++ ++   SWT +I  Y R G  ++A+E F +M +   +P+ + +  
Sbjct: 268 KCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSC 327

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL        +  GK+ H  IIR+  G     +  +LI  Y +   +     V   + +R
Sbjct: 328 VLSGLGSSANVNRGKAFHAVIIRRNFGDSV-LIANSLISMYGKFELVDVAGTVFGMLHQR 386

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWG---LMPDSFSVASSLSACGNVGSLQLGL 419
           +  SW+++++ Y + G+  + LEL  QMQ       + D  S+ S++S+C  +G L+LG 
Sbjct: 387 DDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQ 446

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNG 478
            +H + IK    +  + +SLI MY +CG   LA  +F   + ++ VV WN++I  +   G
Sbjct: 447 SVHCYSIKCLLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVG 506

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            S +A++L+ QM    ++ +  T +T I AC+N+  LE G+ +H  + + G+  D+ I T
Sbjct: 507 RSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSIST 566

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMY KCG L TA+ +FDSM +R+VV+W+ MI  YGMHG+ N A  LF +M    IKP
Sbjct: 567 ALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKP 626

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           N +TF+ IL AC H+G V+EG+  F  M  + +EP+L+HYACMVDLL +SG ++ A  ++
Sbjct: 627 NSLTFLAILSACCHAGLVDEGRKLFIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLV 686

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
            +MP   +G +WG LL+ C++H   ++   + K+   +   ++GYY L+SN Y     WD
Sbjct: 687 LAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWD 746

Query: 719 EFGKVRSIMEVTGLKKVPGYSTI 741
           E  K+R  M+  G++K  G+S +
Sbjct: 747 EIEKLRDTMKNYGVEKGVGWSAV 769



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 196/434 (45%), Gaps = 44/434 (10%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  N+ +    HA ++          +  LI  Y +   +  +  VF    + D   W++
Sbjct: 334 SSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSL 393

Query: 66  LIKCYMWNNFFEESILLYHKM-IREQ----ATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           ++  Y       + + LY +M  R+       I++ +  S + +CS LG L  G+ VH  
Sbjct: 394 MVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLV--SAISSCSRLGRLRLGQSVHCY 451

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD-KMTSRDVVSWSSIIASYFDNADVSE 179
            IKC  D++  I  S++  YG  G  + A K+F      RDVV+W+++I+SY      ++
Sbjct: 452 SIKCLLDENS-ITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSND 510

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L ++  M+ E V+P+  T++++  AC  L +L     +H +V    ++ D  +  + + 
Sbjct: 511 ALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVD 570

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG L +A   F  + +R   +W  MIS Y   G   +AL+ F +M     +PN +T
Sbjct: 571 MYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLT 630

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            + +L +C   G + EG+ +    IR G        G  L                    
Sbjct: 631 FLAILSACCHAGLVDEGRKL---FIRMG--------GYRL-------------------- 659

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E N+  +  ++    + G+ +EA +L++ M    + PD     + LSAC    + ++GL
Sbjct: 660 -EPNLKHYACMVDLLGKSGLLQEAEDLVLAMP---IKPDGGVWGTLLSACKVHDNFEMGL 715

Query: 420 QIHGHVIKIDCKDE 433
           ++       D +++
Sbjct: 716 RVAKKAFSSDPRND 729


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/718 (33%), Positives = 386/718 (53%), Gaps = 3/718 (0%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H D  +   +I  YAE+G++  ++ +FDT  E D   W  L+ CY+ N    +SI ++ +
Sbjct: 69  HRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M   +       +  VL+ACS + D G G +VH   I+ GF+ D V  ++++  Y +   
Sbjct: 129 MRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           LD A ++F +M  R++V WS++IA Y  N    EGLK+F  M++ G+     T  S+  +
Sbjct: 189 LDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C  L + +    +HGH L+     D  +G + + MY+KC  +  A + F  +      S+
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSY 308

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            A+I  Y R     KALE F  +       + I+L   L +C+ +    EG  +H   ++
Sbjct: 309 NAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVK 368

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G+G     +   +++ Y +CG + E   +   +  R+ +SWN +I+ + +     + L 
Sbjct: 369 CGLGFNI-CVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLS 427

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
           L V M    + PD F+  S + AC    +L  G++IHG ++K     D FV S+L+DMY 
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYG 487

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  + +R+++K+ V WNS+I GF     S  A   F QM    +  D  T+ T
Sbjct: 488 KCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYAT 547

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +  C+N+  +E GK +H +++   +  D+YI + L DMY+KCG++Q ++ +F+   +R+
Sbjct: 548 VLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRD 607

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            V+WSAMI  Y  HG    A  LF++M    +KPN   F+++L AC+H G V++G  YF 
Sbjct: 608 YVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQ 667

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            M+  +G++P ++HY+CMVDLL RS  +  A K+I SM F A+  IW  LL+ C++   +
Sbjct: 668 IMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNV 727

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +V +     L      D+  Y LL+N+YA  G W E  K+RSIM+   LKK PG S I
Sbjct: 728 EVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWI 785



 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 309/583 (53%), Gaps = 8/583 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   +  G   D    + L++ Y++   L  +  +F    E +   W+ +I  Y+ N+
Sbjct: 159 QVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQND 218

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F E + L+  M++    +S   Y SV R+C+ L     G ++HG  +K  F  D +I T
Sbjct: 219 RFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGT 278

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  Y +   + DA KVF+ + +    S+++II  Y       + L++F S+ R  +  
Sbjct: 279 ATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSF 338

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D +++     AC  +        +HG  ++  +  +  + N+ + MY KCG L+ A   F
Sbjct: 339 DEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIF 398

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +E+R   SW A+I+ + ++    K L  FV ML    EP+  T  +V+ +CAG   L 
Sbjct: 399 DDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALN 458

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G  +H +I++ GMG ++ ++G AL++ Y +CG + E EK+   + E+  +SWN +IS +
Sbjct: 459 YGMEIHGRIVKSGMGLDW-FVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGF 517

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
           + +  S+ A     QM   G++PD+F+ A+ L  C N+ +++LG QIH  ++K++   D 
Sbjct: 518 SSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDV 577

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           ++ S+L+DMYSKCG    + L+FE+  ++  V W++MIC +  +G+  +AI LF +M L 
Sbjct: 578 YIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLL 637

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI---SYGVRKDIYIDTALTDMYAKCGDL 550
            ++ +   F++ ++AC+++G ++KG  +H+  I    YG+   +   + + D+  +   +
Sbjct: 638 NVKPNHTIFISVLRACAHMGYVDKG--LHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQV 695

Query: 551 QTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
             A ++ +SM  E + V W  ++    M G +  A   F  +L
Sbjct: 696 NEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL 738



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 305/620 (49%), Gaps = 40/620 (6%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           F +  +L+ CS+L  L  G++ H ++I   F     +   ++  Y +   ++ A KVFD+
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 156 MTSR-------------------------------DVVSWSSIIASYFDNADVSEGLKMF 184
           M  R                               DVVSW+S+++ Y  N    + +++F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M    +  D+ T   + +AC  +        +H   ++   + D   G++ + MYSKC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
             L  A R F ++ +R    W+A+I+ Y ++  F + L+ F  ML+V    +  T  +V 
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERN 363
            SCAGL   + G  +H   ++      YD  +G A ++ YA+C +MS+  KV + +    
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFA--YDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
             S+N +I  YAR+    +ALE+   +Q   L  D  S++ +L+AC  +     G+Q+HG
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHG 364

Query: 424 HVIKIDCKDEF---VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
             +K  C   F   V ++++DMY KCG    A  +F+ ++++  V WN++I    QN   
Sbjct: 365 LAVK--CGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           ++ ++LF  M  + +E D+ T+ + ++AC+    L  G  +H +++  G+  D ++ +AL
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSAL 482

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMY KCG L  A+++ D + E+  VSW+++I  +    Q  +A   F QML+ G+ P+ 
Sbjct: 483 VDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDN 542

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
            T+  +L  C++  ++E GK     +    +  D+   + +VD+ S+ G+++ +  M   
Sbjct: 543 FTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEK 602

Query: 661 MPFPANGSIWGALLNGCRIH 680
            P   +   W A++     H
Sbjct: 603 TP-KRDYVTWSAMICAYAYH 621



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 256/518 (49%), Gaps = 10/518 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +FRSC  L      T+LH H L +   YD    T  ++ YA+   +  +  VF+T   P 
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              +  +I  Y   +   +++ ++  + R   +         L ACS +     G ++HG
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHG 364

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +KCG   +  +  +IL  YG+ G L +A  +FD M  RD VSW++IIA++  N ++ +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F SM+R  +EPD  T  S+ +AC    +L     IHG +++  + +D  +G++ + 
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVD 484

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG L+ AE+   ++E++ T SW ++IS ++     + A   F +MLE+   P+  T
Sbjct: 485 MYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFT 544

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             TVL  CA +  +  GK +H QI++  +  +  Y+   L++ Y++CG M +   +    
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKLNLHSDV-YIASTLVDMYSKCGNMQDSRLMFEKT 603

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +R+ ++W+ +I  YA  G  ++A++L  +MQ   + P+     S L AC ++G +  GL
Sbjct: 604 PKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663

Query: 420 ---QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFY 475
              QI      +D   E   S ++D+  +    N A  L E +  +   V+W +++    
Sbjct: 664 HYFQIMQSHYGLDPHMEHY-SCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCK 722

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
             GN   A   F+ + L     D   ++      +N+G
Sbjct: 723 MQGNVEVAEKAFNSL-LQLDPQDSSAYVLLANVYANVG 759


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/705 (34%), Positives = 379/705 (53%), Gaps = 3/705 (0%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           YA  G +  ++ +FD   E D   W  LI  Y+ N    + I ++ +M R         +
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
             VL++CSSL D G G ++HG  +K GFD D V  +++L  Y +   LD + + F  M  
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           ++ VSWS+IIA    N D+  GL++F  M + GV     T  S+  +C  L +LR    +
Sbjct: 238 KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQL 297

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HGH L+     D  +G + + MY KC +L  A++ F  +      S+ A+I  Y RS   
Sbjct: 298 HGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKG 357

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
            +AL  F  + +     + ++L     +CA +    EG  VH  +  K +      +  A
Sbjct: 358 IEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVH-GLSMKSLCQSNICVANA 416

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           +++ Y +CG + E   V   +  R+ +SWN +I+ + + G  ++ L L V M   G+ PD
Sbjct: 417 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 476

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+  S L AC    +L  G++IH  +IK     D FV  +LIDMYSKCG    A  L +
Sbjct: 477 EFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHD 536

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           R+ +++VV WN++I GF     S EA   F +M    ++ D  T+ T +  C+N+  +E 
Sbjct: 537 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 596

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H ++I   ++ D YI + L DMY+KCG++Q  Q +F+    R+ V+W+AM+  Y  
Sbjct: 597 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 656

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG   +A  +F+ M    +KPN  TF+ +L AC H G VE+G  YF++M   +G++P L+
Sbjct: 657 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 716

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HY+C+VD++ RSG +  A ++I  MPF A+  IW  LL+ C+IH  ++V +     +   
Sbjct: 717 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQL 776

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              D+  Y LLSNIYA  G W+E  K+R +M   GLKK PG S I
Sbjct: 777 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 821



 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 175/588 (29%), Positives = 314/588 (53%), Gaps = 7/588 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + +SC++L       ++H   +  G   D    + L++ YA+   L  S   F +  E +
Sbjct: 180 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKN 239

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I   + N+     + L+ +M +    +S   + SV R+C+ L  L  G ++HG
Sbjct: 240 WVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHG 299

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K  F  D VI T+ L  Y +   L DA+K+F+ + + ++ S+++II  Y  +    E
Sbjct: 300 HALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIE 359

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L MF  + + G+  D V++     AC  +        +HG  ++   + +  + N+ + 
Sbjct: 360 ALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILD 419

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG L+ A   F ++  R   SW A+I+ + ++G  +K L  FV ML+   EP+  T
Sbjct: 420 MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT 479

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CAG   L  G  +H +II+  +G +  ++G ALI+ Y++CG M + EK+   +
Sbjct: 480 YGSVLKACAGWQALNCGMEIHNRIIKSRLGLD-SFVGIALIDMYSKCGMMEKAEKLHDRL 538

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+ ++SWN +IS ++ +  S+EA +   +M   G+ PD+F+ A+ L  C N+ +++LG 
Sbjct: 539 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 598

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH  +IK + + D ++ S+L+DMYSKCG      L+FE+   +  V WN+M+CG+ Q+G
Sbjct: 599 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 658

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
              EA+ +F  M L  ++ +  TFL  ++AC ++G +EKG  + H  L +YG+   +   
Sbjct: 659 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 718

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
           + + D+  + G +  A  + + M  E + V W  ++    +HG +  A
Sbjct: 719 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVA 766



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/615 (28%), Positives = 309/615 (50%), Gaps = 34/615 (5%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRII-------------------KCG--------FD--- 127
           +  + + CS    L  G++ H R+I                   KC         FD   
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMP 104

Query: 128 -KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
            +D V   ++L  Y   G +  A+K+FD M  RDVVSW+S+I+ Y  N D  + + +F  
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQ 164

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M R G   D  T   + ++C  L        IHG  ++     D   G++ + MY+KC  
Sbjct: 165 MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  + + F  + ++   SW+A+I+   ++   +  LE F +M +     +  T  +V  S
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CAGL  LR G  +H   ++   G +   +G A ++ Y +C  +S+ +K+ +++   N+ S
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDV-VIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           +N +I  YAR     EAL +   +Q  GL  D  S++ +  AC  +     GLQ+HG  +
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 403

Query: 427 KIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K  C+    V ++++DMY KCG    A L+FE +  +  V WN++I    QNGN  + ++
Sbjct: 404 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 463

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF  M  + +E DE T+ + ++AC+    L  G  +H+++I   +  D ++  AL DMY+
Sbjct: 464 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYS 523

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG ++ A+++ D ++E+ VVSW+A+I  + +  Q  +A   F +ML+ G+ P+  T+  
Sbjct: 524 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 583

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           IL  C++  +VE GK     +    ++ D    + +VD+ S+ G+++  F++I       
Sbjct: 584 ILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD-FQLIFEKAPNR 642

Query: 666 NGSIWGALLNGCRIH 680
           +   W A++ G   H
Sbjct: 643 DFVTWNAMVCGYAQH 657



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 263/547 (48%), Gaps = 43/547 (7%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T   + + C +  +L P +  H  ++  + K    + N  I MY KC DL  A + F  +
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 258 EKRCTTSWTAM-------------------------------ISCYNRSGWFQKALESFV 286
            +R T SW AM                               IS Y  +G  +K ++ F+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAE 345
           +M  +    +  T   VL SC+ L     G  +H   ++  MG + D + G AL++ YA+
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVK--MGFDCDVVTGSALLDMYAK 221

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           C K+    +  H++ E+N +SW+ +I+   +    +  LEL  +MQ  G+     + AS 
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
             +C  + +L+LG Q+HGH +K D   D  + ++ +DMY KC   + A  LF  +   ++
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNL 341

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI-GQLEKGKWVHH 523
             +N++I G+ ++   +EA+ +F  +  + L +DEV+   A +AC+ I G LE G  VH 
Sbjct: 342 QSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE-GLQVHG 400

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             +    + +I +  A+ DMY KCG L  A  VF+ M  R+ VSW+A+I  +  +G    
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 460

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA--CM 641
             SLF  ML SG++P+E T+ ++L AC+   ++  G    N  RI      L  +    +
Sbjct: 461 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHN--RIIKSRLGLDSFVGIAL 518

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI-DVMKTIEKELSVTGTND 700
           +D+ S+ G +E A K+ H          W A+++G  + K+  +  KT  K L +    D
Sbjct: 519 IDMYSKCGMMEKAEKL-HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 577

Query: 701 NGYYTLL 707
           N  Y  +
Sbjct: 578 NFTYATI 584


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/747 (31%), Positives = 413/747 (55%), Gaps = 9/747 (1%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C+NL   R+  ++HA ++V  +  D     R++  YA  GS  +   +F       
Sbjct: 37  LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96

Query: 60  SFM--WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           S +  W  +I  ++      +++  Y KM+    +     +P +++AC +L +    E +
Sbjct: 97  SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFL 156

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
              +   G D ++ + +S++  Y E+G +D A K+FD++  +D V W+ ++  Y      
Sbjct: 157 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGAS 216

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
              +K F  M  + + P+ VT   +   C     +     +HG V+   +  +G + NS 
Sbjct: 217 DSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSL 276

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MYSKCG    A + F  + +  T +W  MIS Y +SG  +++L  F +M+     P+ 
Sbjct: 277 LSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDA 336

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           IT  ++L S +    L   + +HC I+R  +  +  +L  ALI+ Y +C  +S  +K+  
Sbjct: 337 ITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDI-FLTSALIDAYFKCRGVSMAQKIFS 395

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                +++ +  +IS Y   G++ +ALE+   +    + P+  ++ S L   G + +L+L
Sbjct: 396 QCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKL 455

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G ++HG +IK    +   +  ++IDMY+KCG  NLAY +F R+ ++ +V WNSMI    Q
Sbjct: 456 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQ 515

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           + N   AI++F QM ++ +  D V+   A+ AC+N+     GK +H  +I + +  D+Y 
Sbjct: 516 SDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYS 575

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SG 595
           ++ L DMYAKCG+L+ A  VFD+M E+N+VSW+++I  YG HG+L D+  LF +M++ SG
Sbjct: 576 ESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSG 635

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            +P+++TF+ I+  C H G V+EG  +F +M + +G++P  +HYAC+VDL  R+G +  A
Sbjct: 636 NRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEA 695

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           ++ + SMPFP +  +WG LL   R+HK +++ K     L      ++GYY L+SN +A  
Sbjct: 696 YETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANT 755

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G W+   KVRS+M+   ++K+PGYS I
Sbjct: 756 GEWESVTKVRSLMKEREVQKIPGYSWI 782



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 172/328 (52%), Gaps = 10/328 (3%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P  ++L+  L  C+ L  LR+GK VH  +I   +  +  Y    ++  YA CG  S C K
Sbjct: 31  PRRLSLL--LQDCSNLTLLRQGKQVHAFVIVNRISGD-SYTDERILGMYAMCGSFSNCGK 87

Query: 355 VIHAIGER--NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
           + + +  R  +I  WN +IS + R G+  +AL    +M  +G+ PD  +    + AC  +
Sbjct: 88  MFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 147

Query: 413 GSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
            + + G++     +    +DC +EFV SSLI  Y + G  ++A  LF+R+ QK  V+WN 
Sbjct: 148 KNFK-GIEFLSDTVSSLGMDC-NEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNV 205

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           M+ G+ + G S   I  F  M ++ +  + VTF   +  C++   ++ G  +H  ++  G
Sbjct: 206 MLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 265

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +  +  I  +L  MY+KCG    A ++F  MS  + V+W+ MI  Y   G + ++   F 
Sbjct: 266 LDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFY 325

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVE 617
           +M+ SG+ P+ +TF ++L + S   ++E
Sbjct: 326 EMISSGVLPDAITFSSLLPSVSKFENLE 353



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 183/361 (50%), Gaps = 3/361 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      NL    ++H +++   +  D   ++ LI++Y +   +  ++ +F      D 
Sbjct: 343 LPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDV 402

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            ++  +I  Y+ N    +++ ++  +++ + + +     S+L     L  L  G ++HG 
Sbjct: 403 VVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGF 462

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK GFD    I  +++  Y + G ++ A ++F +++ RD+VSW+S+I     + + S  
Sbjct: 463 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAA 522

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G+  D V++ +   AC  L S    ++IHG +++  + +D    ++ I M
Sbjct: 523 IDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDM 582

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-EEPNLIT 299
           Y+KCG+L +A   F  ++++   SW ++I+ Y   G  + +L  F +M+E     P+ IT
Sbjct: 583 YAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQIT 642

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + ++  C  +G + EG      + +  G+ P+ ++    +++ +   G++SE  + + +
Sbjct: 643 FLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYA-CVVDLFGRAGRLSEAYETVKS 701

Query: 359 I 359
           +
Sbjct: 702 M 702


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/659 (34%), Positives = 389/659 (59%), Gaps = 26/659 (3%)

Query: 96  FIYPS--VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           + +PS  +L  C+SL +L    ++   IIK GF  + + QT ++  + +F  + +A +VF
Sbjct: 43  YRHPSAILLELCTSLKEL---HQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVF 99

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP---DFVTMLSLAEACGELC 210
           + +  +  V + +++  Y  N+ + + ++ +  M  + V P   DF  +L L+   GE  
Sbjct: 100 EPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLS---GENL 156

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            LR  R IHG V+    + +     + + +Y+KC  +  A + F ++ +R   SW  +++
Sbjct: 157 DLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVA 216

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y ++G+ ++A++  ++M E  ++P+ ITL++VL + A L  LR G+S+H    R G   
Sbjct: 217 GYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAG--- 273

Query: 331 EYDYL---GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
            ++Y+     A+++ Y +CG +     V   +  RN++SWN +I  YA+ G S+EA    
Sbjct: 274 -FEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATF 332

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK----DEFVQSSLIDMY 443
           ++M   G+ P + S+  +L AC N+G L+ G  +H     +D K    D  V +SLI MY
Sbjct: 333 LKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHR---LLDEKKIGFDVSVMNSLISMY 389

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           SKC   ++A  +F  ++ K+VV WN+MI G+ QNG   EA+NLF +M  + ++ D  T +
Sbjct: 390 SKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLV 449

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           + I A +++    + KW+H   I   + K++++ TAL D +AKCG +QTA+++FD M ER
Sbjct: 450 SVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQER 509

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           +V++W+AMID YG +G   +A  LF +M +  +KPNE+TF++++ ACSHSG VEEG +YF
Sbjct: 510 HVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYF 569

Query: 624 NAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
            +M+  +G+EP + HY  MVDLL R+G ++ A+K I  MP     ++ GA+L  CRIHK 
Sbjct: 570 ESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKN 629

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +++ +    EL     +D GY+ LL+N+YA    WD+  +VR+ ME  G++K PG S +
Sbjct: 630 VELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLV 688



 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 178/634 (28%), Positives = 328/634 (51%), Gaps = 39/634 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   CT+L++L ++   ++  G + +    T+LI  + +  S+  +  VF+  +     +
Sbjct: 50  LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           +  ++K Y  N+   +++  Y +M  ++     + +  +L+      DL  G ++HG +I
Sbjct: 110 YHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVI 169

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
             GF  +    T+++  Y +   ++DA K+F++M  RD+VSW++++A Y  N      ++
Sbjct: 170 TNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQ 229

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +   M   G +PD +T++S+  A  +L +LR  RSIHG+  R   +    +  + +  Y 
Sbjct: 230 VVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYF 289

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG + SA   F  +  R   SW  MI  Y ++G  ++A  +F+KML+   EP  ++++ 
Sbjct: 290 KCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMG 349

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
            L +CA LG L  G+ VH  +  K +G +   +  +LI  Y++C ++     V   +  +
Sbjct: 350 ALHACANLGDLERGRYVHRLLDEKKIGFDVSVMN-SLISMYSKCKRVDIAASVFGNLKHK 408

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
            +++WN +I  YA+ G   EAL L  +MQ+  + PDSF++ S ++A  ++   +    IH
Sbjct: 409 TVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468

Query: 423 GHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G  I+ +  K+ FV ++LID ++KCG    A  LF+ +Q++ V+ WN+MI G+  NG+  
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGR 528

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTAL 540
           EA++LF++M    ++ +E+TFL+ I ACS+ G +E+G +    +  +YG+          
Sbjct: 529 EALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGL---------- 578

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
                                E  +  + AM+D  G  G+L+DA   +K + D  +KP  
Sbjct: 579 ---------------------EPTMDHYGAMVDLLGRAGRLDDA---WKFIQDMPVKPGI 614

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
                +L AC    +VE G+    A  +F ++PD
Sbjct: 615 TVLGAMLGACRIHKNVELGE--KTADELFDLDPD 646



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 180/361 (49%), Gaps = 8/361 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR    +H +    G  Y    +T ++++Y + GS+RS+RLVF      + 
Sbjct: 250 LPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNV 309

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  N   EE+   + KM+ E    +N      L AC++LGDL  G  VH R
Sbjct: 310 VSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVH-R 368

Query: 121 II---KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           ++   K GFD    +  S++  Y +   +D A  VF  +  + VV+W+++I  Y  N  V
Sbjct: 369 LLDEKKIGFDVS--VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCV 426

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           +E L +F  M    ++PD  T++S+  A  +L   R A+ IHG  +R  +  +  +  + 
Sbjct: 427 NEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTAL 486

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I  ++KCG + +A + F  +++R   +W AMI  Y  +G  ++AL+ F +M     +PN 
Sbjct: 487 IDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNE 546

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           IT ++V+ +C+  G + EG      +    G+ P  D+ G A+++     G++ +  K I
Sbjct: 547 ITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYG-AMVDLLGRAGRLDDAWKFI 605

Query: 357 H 357
            
Sbjct: 606 Q 606


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/735 (33%), Positives = 406/735 (55%), Gaps = 8/735 (1%)

Query: 13  LTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVF--DTFKEPDSFMWAVLIKC 69
           L R HA  LV+G L    P +  L+ SYA +  L S+RLV      +   +F+W  L + 
Sbjct: 32  LRRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRA 91

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL--GSGEKVHGRIIKCGFD 127
               +   E++ +Y+ M+R      +  +P  L A ++        G ++H   ++ G  
Sbjct: 92  LSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHL 151

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            D     +++  Y   G   DAR+VFD+M  RDVVSW+S+++++  N    +  +   SM
Sbjct: 152 ADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSM 211

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           +R G   +  +++S+  ACG     +   SIH   ++  +     L N+ + MY K GD+
Sbjct: 212 MRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDV 271

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            ++ + F  + ++   SW + I C+  +G++   L  F KM E    P  ITL ++L + 
Sbjct: 272 EASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPAL 331

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
             LG    G+ VH   I++ M  +  ++  +L++ YA+ G + +   +   + +RN++SW
Sbjct: 332 VELGSFDLGREVHGYSIKRAMDLDI-FVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSW 390

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +I+   + G   EA  L+  MQ  G  P+S ++ + L AC  + SL++G QIH   I+
Sbjct: 391 NAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIR 450

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D F+ ++LIDMYSKCG  +LA  +FER  +K  V +N++I G+ Q+    E++ L
Sbjct: 451 RGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLL 509

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F QM    ++ D V+F+ A+ AC+N+   + GK +H  L+   +    ++  +L D+Y K
Sbjct: 510 FKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTK 569

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            G L TA ++F+ +++++V SW+ MI  YGMHGQ++ A  LF+ M   G+  + V+++ +
Sbjct: 570 GGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAV 629

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L ACSH G V++GK YF+ M    +EP   HYACMVDLL R+G +    ++I  MPFPAN
Sbjct: 630 LAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPAN 689

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
             +WGALL  CRIH  I++ +   + L       +GYYTL+ N+YAE G W+E  K+R +
Sbjct: 690 SDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKL 749

Query: 727 MEVTGLKKVPGYSTI 741
           M+   ++K P YS +
Sbjct: 750 MKSRKVQKNPAYSWV 764



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 153/364 (42%), Gaps = 37/364 (10%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +L+   ++HA  +  GL +D   S  LI+ Y++ G L  +R +F+   E D 
Sbjct: 429 LPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDD 487

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +  LI  Y  + +  ES+LL+ +M           +   L AC++L     G+++H  
Sbjct: 488 VSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCV 547

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++        +  S+L  Y + G L  A K+F+K+T +DV SW+++I  Y  +  +   
Sbjct: 548 LVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIA 607

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            ++F  M  +G++ D V+ +++  AC            HG ++ +  K        F  M
Sbjct: 608 FELFELMKGDGLDYDHVSYIAVLAACS-----------HGGLVDKGKKY-------FSQM 649

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            ++             IE +    +  M+    R+G   K  E    M       N    
Sbjct: 650 VAQ------------NIEPQ-QMHYACMVDLLGRAGQLSKCAEIIRDM---PFPANSDVW 693

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +LG+C   G +   +     +    + PE+      +I  YAE G+ +E  K+   + 
Sbjct: 694 GALLGACRIHGNIELAQWAAEHLFE--LKPEHSGYYTLMINMYAETGRWNEANKIRKLMK 751

Query: 361 ERNI 364
            R +
Sbjct: 752 SRKV 755


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/731 (32%), Positives = 403/731 (55%), Gaps = 6/731 (0%)

Query: 15  RLHAHLLVTGLH-YDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           ++H+ ++V G H +D      L+ +Y+++  +  +  +FDT    +   W+ ++  Y  +
Sbjct: 59  KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHH 118

Query: 74  NFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           +   E+++L+ + +R      N +I  SV+RAC+  G L    ++HG ++K G+ +D  +
Sbjct: 119 SHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYV 178

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            TS++  Y +  C+DDAR +FD +  +   +W++IIA Y         LK+F  M    V
Sbjct: 179 CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHV 238

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            PD   + S+  AC  L  L   + IH +VLR  I +D  + N FI  Y KC  +    +
Sbjct: 239 CPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRK 298

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++  +   SWT +I+   ++ + + AL+ FV+M  +   P+     +VL SC  L  
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +G+ VH   I+  +  + D++   LI+ YA+C  +++  KV + +   +++S+N +I 
Sbjct: 359 LEKGRQVHAYAIKVNIDND-DFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIE 417

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y+R+    EAL+L  +M+     P      S L    ++  L+L  QIHG +IK     
Sbjct: 418 GYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSL 477

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           DEF  S+LID+YSKC     A L+FE IQ K +V+W +M  G+ Q   + E++ L+  + 
Sbjct: 478 DEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQ 537

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           ++ L+ +E TF   I A SNI  L  G+  H+++I  G   D ++   L DMYAK G ++
Sbjct: 538 MSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIE 597

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A + F S + ++   W++MI  Y  HG+   A  +F+ M+  G+KPN VTF+ +L ACS
Sbjct: 598 EAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACS 657

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           H+G ++ G  +F++M  FG+EP ++HY CMV LL R+G +  A + I  MP      +W 
Sbjct: 658 HTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWR 717

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVT-GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           +LL+ CR+   ++ + T   E++++    D+G Y LLSNI+A +G W    ++R  M+++
Sbjct: 718 SLLSACRVSGNVE-LGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDIS 776

Query: 731 GLKKVPGYSTI 741
           G+ K PG S I
Sbjct: 777 GVVKEPGCSWI 787



 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 301/545 (55%), Gaps = 4/545 (0%)

Query: 115 EKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           +K+H +I+  GF K D+ +  ++L  Y +   ++ A K+FD M+ +++V+WSS+++ Y  
Sbjct: 58  KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117

Query: 174 NADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           ++   E L +F   +R   E P+   + S+  AC +   L PA  IHG V++     D  
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +  S I  Y+K   +  A   F  ++ + + +WT +I+ Y++ G  Q +L+ F +M E  
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             P+   L +VL +C  L +L  GK +HC ++R G+  +   +    I+FY +C K+   
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVN-GFIDFYFKCHKVQLG 296

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            K+   + ++N++SW  +I+   +    ++AL+L V+M   G  PD+F   S L++CG++
Sbjct: 297 RKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSL 356

Query: 413 GSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
            +L+ G Q+H + IK++   D+FV++ LIDMY+KC     A  +F  +    +V +N+MI
Sbjct: 357 VALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMI 416

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G+ +     EA++LF +M L+      + F++ +   +++  LE    +H  +I YGV 
Sbjct: 417 EGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVS 476

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            D +  +AL D+Y+KC  +  A+ VF+ + ++++V W+AM   Y    +  ++  L+K +
Sbjct: 477 LDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCL 536

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
             S +KPNE TF  ++ A S+  S+  G+ + N +   G + D      +VD+ ++SG I
Sbjct: 537 QMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSI 596

Query: 652 EGAFK 656
           E A K
Sbjct: 597 EEAHK 601



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 185/655 (28%), Positives = 311/655 (47%), Gaps = 48/655 (7%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+CT    L    ++H  ++  G   D    T LI+ Y +   +  +RL+FD  +   
Sbjct: 147 VVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKT 206

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           SF W  +I  Y      + S+ L+ +M         ++  SVL AC  L  L  G+++H 
Sbjct: 207 SFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHC 266

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +++ G   D  +    +  Y +   +   RK+FD+M  ++VVSW+++IA    N+   +
Sbjct: 267 YVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRD 326

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M R G  PD     S+  +CG L +L   R +H + ++  I  D  + N  I 
Sbjct: 327 ALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLID 386

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KC  L  A + F  +      S+ AMI  Y+R     +AL+ F +M      P L+ 
Sbjct: 387 MYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLI 446

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++LG  A L  L     +H  II+ G+  + ++ G ALI+ Y++C ++ +   V   I
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYGVSLD-EFAGSALIDVYSKCSRVGDARLVFEEI 505

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +++I+ W  + S Y ++  ++E+L+L   +Q   L P+ F+ A+ ++A  N+ SL+ G 
Sbjct: 506 QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQ 565

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H  VIK+   D+ FV ++L+DMY+K G    A+  F     K    WNSMI  + Q+G
Sbjct: 566 QFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHG 625

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            + +A+ +F  M +  L+ + VTF+  + ACS+ G L+ G + H                
Sbjct: 626 EAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLG-FDH---------------- 668

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS----ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
                             FDSMS    E  +  +  M+   G  G+L +A    ++M   
Sbjct: 669 ------------------FDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKM--- 707

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
            IK   V + ++L AC  SG+VE G  Y   M I     D   Y  + ++ +  G
Sbjct: 708 PIKQAAVVWRSLLSACRVSGNVELGT-YAAEMAISCNPADSGSYVLLSNIFASKG 761


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/669 (34%), Positives = 384/669 (57%), Gaps = 3/669 (0%)

Query: 75  FFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
           + EE+++++  + R+     N F+  SV+RAC+ LG +  G ++HG +++ GFD+D  + 
Sbjct: 16  YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 75

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           TS++  Y + G ++ AR VFD++  +  V+W++IIA Y         L++F  M    V 
Sbjct: 76  TSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVV 135

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD   + S+  AC  L  L   + IH +VLRR  ++D  + N  I  Y+KC  + +  + 
Sbjct: 136 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 195

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F ++  +   SWT MIS Y ++ +  +A++ F +M  +  +P+     +VL SC  L  L
Sbjct: 196 FDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEAL 255

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +G+ VH   I+  +    +++   LI+ YA+   + + +KV   + E+N++S+N +I  
Sbjct: 256 EQGRQVHAYTIKANLESN-EFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           Y+ +    EALEL  +M+     P   +  S L    ++ +L+L  QIHG +IK     D
Sbjct: 315 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLD 374

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            F  S+LID+YSKC +   A  +FE + +K +V+WN+M  G+ Q+  + EA+ L+  +  
Sbjct: 375 LFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 434

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           +  + +E TF   I A SN+  L  G+  H++L+  G+    ++  AL DMYAKCG ++ 
Sbjct: 435 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEE 494

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A+++F+S   R+VV W++MI  +  HG+  +A  +F++M+  GI+PN VTF+ +L ACSH
Sbjct: 495 ARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSH 554

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           +G VE+G  +FN+M  FG++P  +HYAC+V LL RSG +  A + I  MP      +W +
Sbjct: 555 AGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL+ CRI   +++ K   +    T   D+G Y LLSNI+A +G W +  KVR  M+ + +
Sbjct: 615 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 674

Query: 733 KKVPGYSTI 741
            K PG S I
Sbjct: 675 VKEPGRSWI 683



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 181/651 (27%), Positives = 322/651 (49%), Gaps = 40/651 (6%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+CT L    K  +LH  ++ +G   D    T LI+ Y++ G +  +RLVFD   E  
Sbjct: 43  VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKT 102

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I  Y        S+ L+ +M         ++  SVL ACS L  L  G+++H 
Sbjct: 103 AVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 162

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +++ G + D  +   ++  Y +   +   RK+FD+M  ++++SW+++I+ Y  N+   E
Sbjct: 163 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 222

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +K+F  M R G +PD     S+  +CG L +L   R +H + ++  ++ +  + N  I 
Sbjct: 223 AMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLID 282

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K   L  A++ F  + ++   S+ AMI  Y+      +ALE F +M      P+L+T
Sbjct: 283 MYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLT 342

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++LG  A L  L   K +H  II+ G+  +  + G ALI+ Y++C  + +   V   +
Sbjct: 343 FVSLLGVSASLFALELSKQIHGLIIKXGVSLDL-FAGSALIDVYSKCSYVKDARHVFEEM 401

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++I+ WN +   Y +   ++EAL+L   +Q     P+ F+ A+ ++A  N+ SL+ G 
Sbjct: 402 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 461

Query: 420 QIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H  ++K+      FV ++L+DMY+KCG    A  +F     + VV WNSMI    Q+G
Sbjct: 462 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 521

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            + EA+ +F +M    ++ + VTF+  + ACS+ G +E G    + +  +G++       
Sbjct: 522 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPG----- 576

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
             T+ YA                         ++   G  G+L +A    ++M    I+P
Sbjct: 577 --TEHYA------------------------CVVSLLGRSGKLFEAKEFIEKM---PIEP 607

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
             + + ++L AC  +G+VE GK Y   M I     D   Y  + ++ +  G
Sbjct: 608 AAIVWRSLLSACRIAGNVELGK-YAAEMAISTDPKDSGSYILLSNIFASKG 657


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/775 (32%), Positives = 401/775 (51%), Gaps = 37/775 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGL-------------------------------HYD 28
           + + C+NL+ L    ++H  ++VTG                                  D
Sbjct: 12  ILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRD 71

Query: 29  PPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR 88
             +   LI  YA +G++  ++ +FD+  E D   W  L+ CY+ N    +SI ++ +M  
Sbjct: 72  VISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRS 131

Query: 89  EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
            +       +  +L+ACS + D G G +VH   I+ GF+ D V  ++++  Y +   LDD
Sbjct: 132 LKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDD 191

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A +VF +M  R++V WS++IA Y  N    EGLK+F  M++ G+     T  S+  +C  
Sbjct: 192 AFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAG 251

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           L + +    +HGH L+     D  +G + + MY+KC  +  A + F  +      S+ A+
Sbjct: 252 LSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAI 311

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I  Y R     KAL+ F  +       + I+L   L +C+ +    EG  +H   ++ G+
Sbjct: 312 IVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGL 371

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
           G     +   +++ Y +CG + E   +   +  R+ +SWN +I+ + +     + L L V
Sbjct: 372 GFNI-CVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFV 430

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG 447
            M    + PD F+  S + AC    +L  G +IHG +IK     D FV S+L+DMY KCG
Sbjct: 431 SMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCG 490

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  +  R+++K+ V WNS+I GF     S  A   F QM    +  D  T+ T + 
Sbjct: 491 MLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLD 550

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            C+N+  +E GK +H +++   +  D+YI + L DMY+KCG++Q ++ +F+   +R+ V+
Sbjct: 551 VCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVT 610

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           WSAMI  Y  HG    A +LF++M    +KPN   F+++L AC+H G V++G  YF  M 
Sbjct: 611 WSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKML 670

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             +G++P ++HY+CMVDLL RSG +  A K+I SMPF A+  IW  LL+ C++   ++V 
Sbjct: 671 SHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVA 730

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +     L      D+  Y LL+N+YA  G W E  K+RSIM+   LKK PG S I
Sbjct: 731 EKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWI 785



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 171/346 (49%), Gaps = 33/346 (9%)

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T   +L  C+ L  L  GK VH Q+I  G  P   Y+   L++FY +  KM+   KV  
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTI-YVANCLLQFYCKSSKMNYAFKVFD 65

Query: 358 AIGERNILSWNMLISEYA-------------------------------RKGMSKEALEL 386
            + +R+++SWN LI  YA                                 G++++++E+
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSK 445
            V+M++  +  D  + A  L AC  +    LGLQ+H   I++  +++ V  S+L+DMYSK
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C   + A+ +F  + ++++V W+++I G+ QN   +E + LF  M    + + + T+ + 
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
            ++C+ +   + G  +H   +      D  I TA  DMYAKC  +  A +VF+++     
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            S++A+I  Y    Q   A  +F+ +  + +  +E++    L ACS
Sbjct: 306 QSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS 351



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 34/242 (14%)

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           ++TF   +Q CSN+  L  GK VH ++I  G    IY+   L   Y K   +  A +VFD
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM---------------LDSGIKPNEV-- 601
            M +R+V+SW+ +I  Y   G +  A SLF  M               L +G+    +  
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 602 --------------TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
                         TF  IL ACS       G          G E D+   + +VD+ S+
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEKELSV-TGTNDNGYYT 705
              ++ AF++   MP   N   W A++ G   + R I+ +K  +  L V  G + + Y +
Sbjct: 186 CKKLDDAFRVFREMP-ERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 706 LL 707
           + 
Sbjct: 245 VF 246


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/733 (32%), Positives = 400/733 (54%), Gaps = 8/733 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++V GL  D   S  LI  Y+  G +  +R VF+   E +   W+ ++     +  
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGE--KVHGRIIKCGFDKDDVI 132
           +EES++++ +  R +    N +I  S ++ACS L   G     ++   ++K GFD+D  +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            T ++  Y + G +D AR VFD +  +  V+W+++I+           L++F+ ++ + V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            PD   + ++  AC  L  L   + IH H+LR  +++D  L N  I  Y KCG +++A +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +  +   SWT ++S Y ++   ++A+E F  M +   +P++    ++L SCA L  
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G  VH   I+  +G +  Y+  +LI+ YA+C  +++  KV       +++ +N +I 
Sbjct: 366 LGFGTQVHAYTIKANLGND-SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424

Query: 373 EYARKGMS---KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
            Y+R G      EAL +   M+   + P   +  S L A  ++ SL L  QIHG + K  
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484

Query: 430 CK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              D F  S+LID+YS C     + L+F+ ++ K +V+WNSM  G+ Q   + EA+NLF 
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           ++ L+    DE TF   + A  N+  ++ G+  H +L+  G+  + YI  AL DMYAKCG
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
             + A + FDS + R+VV W+++I  Y  HG+   A  + ++M+  GI+PN +TF+ +L 
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           ACSH+G VE+G   F  M  FG+EP+ +HY CMV LL R+G +  A ++I  MP      
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI 724

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           +W +LL+GC     +++ +   +   ++   D+G +T+LSNIYA +G W E  KVR  M+
Sbjct: 725 VWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMK 784

Query: 729 VTGLKKVPGYSTI 741
           V G+ K PG S I
Sbjct: 785 VEGVVKEPGRSWI 797



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 259/524 (49%), Gaps = 7/524 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HAH+L  GL  D      LI+SY + G + ++  +F+     +   W  L+  Y  N 
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E++ L+  M +       +   S+L +C+SL  LG G +VH   IK     D  +  
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF---DNADVSEGLKMFHSMVREG 191
           S++  Y +  CL DARKVFD   + DVV ++++I  Y       ++ E L +F  M    
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           + P  +T +SL  A   L SL  ++ IHG + +  + +D   G++ I +YS C  L  + 
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F +++ +    W +M + Y +    ++AL  F+++   +E P+  T   ++ +   L 
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            ++ G+  HCQ++++G+     Y+  AL++ YA+CG   +  K   +   R+++ WN +I
Sbjct: 570 SVQLGQEFHCQLLKRGLECN-PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S YA  G  K+AL++L +M + G+ P+  +    LSAC + G ++ GL+    +++   +
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688

Query: 432 DEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGNSLEAINLFHQ 489
            E      ++ +  + G  N A  L E++  K + ++W S++ G  + GN +E      +
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN-VELAEHAAE 747

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           M +     D  +F       ++ G   + K V  ++   GV K+
Sbjct: 748 MAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 215/471 (45%), Gaps = 45/471 (9%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC +L  L   T++HA+ +   L  D   +  LI+ YA+   L  +R VFD F   D
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415

Query: 60  SFMWAVLIKCY-----MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             ++  +I+ Y      W     E++ ++  M       S   + S+LRA +SL  LG  
Sbjct: 416 VVLFNAMIEGYSRLGTQWE--LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           +++HG + K G + D    ++++  Y    CL D+R VFD+M  +D+V W+S+ A Y   
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           ++  E L +F  +      PD  T  ++  A G L S++  +  H  +L+R ++ +  + 
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ + MY+KCG    A + F     R    W ++IS Y   G  +KAL+   KM+    E
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           PN IT + VL +C+  G + +G      ++R G+ PE ++                    
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH-------------------- 693

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                       +  ++S   R G   +A EL+ +M T    P +    S LS C   G+
Sbjct: 694 ------------YVCMVSLLGRAGRLNKARELIEKMPT---KPAAIVWRSLLSGCAKAGN 738

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           ++L        I  D KD    + L ++Y+  G    A  + ER++ + VV
Sbjct: 739 VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 176/393 (44%), Gaps = 67/393 (17%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S T+L    ++H  +   GL+ D  A + LI+ Y+    L+ SRLVFD  K  D  +W  
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +   Y+  +  EE++ L+ ++   +     F + +++ A  +L  +  G++ H +++K G
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            + +  I  ++L  Y + G  +DA K FD   SRDVV W+S+I+SY ++ +  + L+M  
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M+ EG+EP+++T + +  AC            H  ++   +K        F +M     
Sbjct: 646 KMMSEGIEPNYITFVGVLSACS-----------HAGLVEDGLK-------QFELML---- 683

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
                 R  ++ E   T  +  M+S   R+G   KA E   KM     +P  I   ++L 
Sbjct: 684 ------RFGIEPE---TEHYVCMVSLLGRAGRLNKARELIEKM---PTKPAAIVWRSLLS 731

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
            CA  G                           L E  AE   +S+          ++  
Sbjct: 732 GCAKAG------------------------NVELAEHAAEMAILSD---------PKDSG 758

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           S+ ML + YA KGM  EA ++  +M+  G++ +
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/743 (32%), Positives = 403/743 (54%), Gaps = 9/743 (1%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT   NL++    H  +   GL  D      L++ Y++MG L+ +R VFD   + D
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRD 194

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     +    E++  +  M       S+    ++      L ++     +HG
Sbjct: 195 VVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHG 254

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + +  F     +   ++  Y + G +D AR+VFD+M  +D VSW +++A Y  N    E
Sbjct: 255 YVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 312

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M    V  + V+ +S   A  E   L   + IHG  L+++I  D  +    +V
Sbjct: 313 VLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV 372

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG+   A++ F  ++ R   +W+A+I+   ++G+ ++AL  F +M   K +PN +T
Sbjct: 373 MYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVT 432

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+++L +CA L  L+ GKS+HC  ++  M  +    G AL+  YA+CG  +      + +
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLS-TGTALVSMYAKCGFFTAALTTFNRM 491

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+I++WN LI+ YA+ G    A+++  +++   + PD+ ++   + AC  +  L  G 
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQN 477
            IHG ++K+  + D  V+++LIDMY+KCG    A  LF +    K  V WN +I  + QN
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G++ EAI+ FHQM L     + VTF++ + A + +    +G   H  +I  G   +  + 
Sbjct: 612 GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG 671

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L DMYAKCG L  ++++F+ M  ++ VSW+AM+  Y +HG  + A +LF  M +S ++
Sbjct: 672 NSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            + V+F+++L AC H+G VEEG+  F++M   + ++PDL+HYACMVDLL R+G  +    
Sbjct: 732 IDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
            I  MP   +  +WGALL  CR+H  + + +     L      +  ++ +LS+IYA+ G 
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGR 851

Query: 717 WDEFGKVRSIMEVTGLKKVPGYS 739
           W + GK RS M   GLKK PG S
Sbjct: 852 WADAGKARSKMNDLGLKKTPGCS 874



 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 203/684 (29%), Positives = 361/684 (52%), Gaps = 7/684 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  SC +L  L ++HA ++V+G  +   + T LI  Y+       +R VFD+   P   +
Sbjct: 38  LLSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLYSLFHKCDLARSVFDSTPNPSRIL 96

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+ Y  +  + E++ +Y+ M+ +      + +  VL+AC+   +L  G   HG I 
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G ++D  I   ++  Y + G L  AR+VFDKM  RDVV+W+++IA    + D  E + 
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
            F SM   GVEP  V++L+L     +L ++   RSIHG+V RR       + N  I +YS
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYS 274

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGD+  A R F ++  +   SW  M++ Y  +G F + LE F KM       N ++ ++
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
              + A    L +GK +H   +++ +  +     P ++  YA+CG+  + +++   +  R
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV-MYAKCGETEKAKQLFWGLQGR 393

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           ++++W+ +I+   + G  +EAL L  +MQ   + P+  ++ S L AC ++  L+LG  IH
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
              +K D   +    ++L+ MY+KCGF   A   F R+  + +V WNS+I G+ Q G+  
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            AI++F+++ L+ +  D  T +  + AC+ +  L++G  +H  ++  G   D ++  AL 
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573

Query: 542 DMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
           DMYAKCG L +A+ +F+     ++ V+W+ +I  Y  +G   +A S F QM      PN 
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 633

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           VTF+++L A ++  +  EG  +   +   G   +      ++D+ ++ G ++ + K+ + 
Sbjct: 634 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNE 693

Query: 661 MPFPANGSIWGALLNGCRIHKRID 684
           M      S W A+L+G  +H   D
Sbjct: 694 MDHKDTVS-WNAMLSGYAVHGHGD 716


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 253/754 (33%), Positives = 426/754 (56%), Gaps = 19/754 (2%)

Query: 1   MPL-FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           +PL  ++C     + R   +H  +  T L  D    T +++ Y + G +  +R VFD   
Sbjct: 56  LPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS 115

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D  +W  ++  Y+    +EE++LL  +M RE    ++    ++L AC    +L  G  
Sbjct: 116 DRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRG 175

Query: 117 VHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKV---FDKMTSRDVVSWSSIIASYF 172
           VHG  ++ G FD +  + T+++  Y  F    D R +   FD M  R++VSW+++I+ Y+
Sbjct: 176 VHGYCLRNGMFDSNPHVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYY 231

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           D  D  + L++F  M+ + V+ D VTML   +AC EL SL+  + IH   ++ +   D  
Sbjct: 232 DVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLY 291

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + N+ + MYS  G L S+ + F  +  R    W +MIS Y   G  ++A++ F++M    
Sbjct: 292 ILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEG 351

Query: 293 EEPNLITLITVLGSCAGLG-WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
            + +  T++ +L  C  L   L +GKS+H  +I+ GM  +   LG AL+  Y E   +  
Sbjct: 352 VKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS-LGNALLSMYTELNCVES 410

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            +K+   +   +I+SWN +I   AR  +  +A EL  +M+   + P+S+++ S L+AC +
Sbjct: 411 VQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACED 470

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           V  L  G  IHG+V+K   + ++ ++++L DMY  CG +  A  LFE    + ++ WN+M
Sbjct: 471 VTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAM 530

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG- 529
           I  + +N  + +A+ LFH+M ++  E + VT +  + + +++  L +G+ +H  +   G 
Sbjct: 531 IASYVKNNQAHKALLLFHRM-ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGF 589

Query: 530 -VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            +  D+ +  A   MYA+CG LQ+A+ +F ++ +RN++SW+AMI  YGM+G+ +DA   F
Sbjct: 590 SLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAF 649

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSR 647
            QML+ G +PN VTF+++L ACSHSG +E G   F++M + F V P+L HY+C+VDLL+R
Sbjct: 650 SQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLAR 709

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
            G I+ A + I SMP   + S+W ALL+ CR +      KTI ++L      + G Y LL
Sbjct: 710 GGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLL 769

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           SN+YA  G W E  ++R+ ++  GL+K PG S I
Sbjct: 770 SNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 803



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 183/629 (29%), Positives = 326/629 (51%), Gaps = 9/629 (1%)

Query: 59  DSFMWAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           D   W  +IK +  N   +++IL  Y +M       +N   P VL+AC++   +  G+ +
Sbjct: 17  DPKHWNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  I       D  + T+++  Y + G ++DAR VFD M+ RDVV W++++  Y      
Sbjct: 76  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E + +   M RE + P+  TM++L  AC     LR  R +HG+ LR  +    P   + 
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 195

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           ++ +    D+      F  +  R   SW AMIS Y   G + KALE FV+ML  + + + 
Sbjct: 196 LIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDC 255

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T++  + +CA LG L+ GK +H Q+  K    E  Y+  AL+  Y+  G +    ++  
Sbjct: 256 VTMLVAVQACAELGSLKLGKQIH-QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFE 314

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS-LQ 416
           ++  R+   WN +IS YA  G  +EA++L ++MQ+ G+  D  +V   LS C  + S L 
Sbjct: 315 SVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLL 374

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G  +H HVIK   + D  + ++L+ MY++         +F+R++   ++ WN+MI    
Sbjct: 375 KGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA 434

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           +N    +A  LF +M  + ++ +  T ++ + AC ++  L+ G+ +H  ++ + +  +  
Sbjct: 435 RNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQP 494

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + TAL DMY  CGD  TA+ +F+   +R+++SW+AMI  Y  + Q + A  LF +M+ S 
Sbjct: 495 LRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SE 553

Query: 596 IKPNEVTFMNILWACSHSGSVEEGK--FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            +PN VT +N+L + +H  ++ +G+    +   R F +  DL      + + +R G ++ 
Sbjct: 554 AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQS 613

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           A  +  ++P   N   W A++ G  ++ R
Sbjct: 614 AENIFKTLP-KRNIISWNAMIAGYGMNGR 641



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 246/510 (48%), Gaps = 3/510 (0%)

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           K+  +D   W+S+I    +  +    L  +  M   GV P+  T+  + +AC    ++  
Sbjct: 12  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            +SIH  +    +  D  +G + +  Y KCG +  A   F  +  R    W AM+  Y  
Sbjct: 72  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G +++A+    +M      PN  T++ +L +C G   LR G+ VH   +R GM     +
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  ALI FY     M     +   +  RNI+SWN +IS Y   G   +ALEL VQM    
Sbjct: 192 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAY 453
           +  D  ++  ++ AC  +GSL+LG QIH   IK +  +D ++ ++L++MYS  G    ++
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            LFE +  +   +WNSMI  +   G   EA++LF +M    ++ DE T +  +  C  + 
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370

Query: 514 Q-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L KGK +H  +I  G+R D  +  AL  MY +   +++ Q++FD M   +++SW+ MI
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 430

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
                +     A  LF++M +S IKPN  T ++IL AC     ++ G+     +    +E
Sbjct: 431 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 490

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            +      + D+    GD   A  +    P
Sbjct: 491 INQPLRTALADMYMNCGDEATARDLFEGCP 520


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/739 (32%), Positives = 407/739 (55%), Gaps = 20/739 (2%)

Query: 19  HLLVTG---LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           H LV+G   L  D    TR+I  YA  GS   SR VFD  +  + F W  +I  Y  N  
Sbjct: 107 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           ++E +  + +MI     + + F YP V++AC+ + D+G G  VHG ++K G  +D  +  
Sbjct: 167 YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 226

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE- 193
           +++  YG  G + DA ++FD M  R++VSW+S+I  + DN    E   +   M+ E  + 
Sbjct: 227 ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286

Query: 194 ---PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
              PD  T++++   C     +   + +HG  ++ ++  +  L N+ + MYSKCG + +A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE--PNLITLITVLGSCA 308
           +  F     +   SW  M+  ++  G      +   +ML   E+   + +T++  +  C 
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIHAIGERNIL 365
              +L   K +HC  +++    E+ Y   +  A +  YA+CG +S  ++V H I  + + 
Sbjct: 407 HESFLPSLKELHCYSLKQ----EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN LI  +A+    + +L+  +QM+  GL+PDSF+V S LSAC  + SL+LG ++HG +
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522

Query: 426 IKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           I+    +D FV  S++ +Y  CG       LF+ ++ KS+V WN++I G+ QNG    A+
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            +F QM L  +++  ++ +    ACS +  L  G+  H   + + +  D +I  +L DMY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           AK G +  + +VF+ + E++  SW+AMI  YG+HG   +A  LF++M  +G  P+++TF+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702

Query: 605 NILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMI-HSMP 662
            +L AC+HSG + EG  Y + M+  FG++P+L+HYAC++D+L R+G ++ A +++   M 
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
             A+  IW +LL+ CRIH+ +++ + +  +L          Y LLSN+YA  G W++  K
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           VR  M    L+K  G S I
Sbjct: 823 VRQRMNEMSLRKDAGCSWI 841



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/611 (27%), Positives = 313/611 (51%), Gaps = 24/611 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++ TGL  D      L+  Y   G +  +  +FD   E +   W  +I+ +  N F
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268

Query: 76  FEESILLYHKMIREQA------TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
            EES LL  +M+ E         ++  +  +VL  C+   ++G G+ VHG  +K   DK+
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLV--TVLPVCAREREIGLGKGVHGWAVKLRLDKE 326

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
            V+  +++  Y + GC+ +A+ +F    +++VVSW++++  +    D      +   M+ 
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386

Query: 190 --EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             E V+ D VT+L+    C     L   + +H + L+++   +  + N+F+  Y+KCG L
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A+R F  I  +   SW A+I  + +S   + +L++ ++M      P+  T+ ++L +C
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506

Query: 308 AGLGWLREGKSVHCQIIRKGMGPE-YDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           + L  LR GK VH  IIR  +  + + YL  +++  Y  CG++   + +  A+ +++++S
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVS 564

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +I+ Y + G    AL +  QM  +G+     S+     AC  + SL+LG + H + +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624

Query: 427 KIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K   +D+ F+  SLIDMY+K G    +  +F  +++KS   WN+MI G+  +G + EAI 
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMY 544
           LF +M       D++TFL  + AC++ G + +G +++     S+G++ ++     + DM 
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744

Query: 545 AKCGDLQTAQRVF-DSMSER-NVVSWSAMIDCYGMHGQL----NDAASLFKQMLDSGIKP 598
            + G L  A RV  + MSE  +V  W +++    +H  L      AA LF+   +   KP
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE---KP 801

Query: 599 NEVTFMNILWA 609
                ++ L+A
Sbjct: 802 ENYVLLSNLYA 812



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 4/366 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L  L  LH + L     Y+   +   + SYA+ GSL  ++ VF   +      W  LI  
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           +  +N    S+  + +M        +F   S+L ACS L  L  G++VHG II+   ++D
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +  S+L  Y   G L   + +FD M  + +VSW+++I  Y  N      L +F  MV 
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            G++   ++M+ +  AC  L SLR  R  H + L+  ++ D  +  S I MY+K G +  
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 650

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           + + F  ++++ T SW AMI  Y   G  ++A++ F +M      P+ +T + VL +C  
Sbjct: 651 SSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 710

Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI--HAIGERNILS 366
            G + EG     Q+    G+ P   +    +I+     G++ +  +V+      E ++  
Sbjct: 711 SGLIHEGLRYLDQMKSSFGLKPNLKHYA-CVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769

Query: 367 WNMLIS 372
           W  L+S
Sbjct: 770 WKSLLS 775



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 201/501 (40%), Gaps = 65/501 (12%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ L+ L     +H  ++   L  D      ++  Y   G L + + +FD  ++  
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ N F + ++ ++ +M+     +       V  ACS L  L  G + H 
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 621

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K   + D  I  S++  Y + G +  + KVF+ +  +   SW+++I  Y  +    E
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 681

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +K+F  M R G  PD +T L +  AC            H  ++   ++    + +SF +
Sbjct: 682 AIKLFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLIHEGLRYLDQMKSSFGL 730

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                              K     +  +I    R+G   KAL    +  E+ EE ++  
Sbjct: 731 -------------------KPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGI 769

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++L SC     L  G+ V  ++    + PE       L   YA  GK  +  KV   +
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827

Query: 360 GERNI-----LSW--------NMLISEYARKGMSK-EALELLVQMQ--TWGLMPDSFSVA 403
            E ++      SW        + ++ E    G  + ++L  +++M+    G  PD+ SV 
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS---LIDMYSK---CGFKNLAYLLFE 457
             LS    +       Q+ GH  K+      +++S    I +Y     C   + A  L  
Sbjct: 888 HDLSEEEKIE------QLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLIS 941

Query: 458 RIQQKSVVMWNSMICGFYQNG 478
           ++ ++ +V+ ++     ++NG
Sbjct: 942 KVMEREIVVRDNKRFHHFKNG 962


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/747 (32%), Positives = 410/747 (54%), Gaps = 9/747 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L +  T L+ L   HA  + TG   +P  + +LI  Y  +    SS  +F +    D+
Sbjct: 15  ISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDT 74

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           F+W   +K     + + + +  Y  M  E    ++F +P V  + +    + SG  +H  
Sbjct: 75  FLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHAL 134

Query: 121 IIKCGF-DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             K GF  ++  + +S +  Y     ++DA KVFD++  RDVV+W++++  Y  N +   
Sbjct: 135 ACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEM 194

Query: 180 GLKMFHSMVREG---VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           GL+    M R G    +P+  T+     ACG L  L   R +HG V++  I     + +S
Sbjct: 195 GLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSS 254

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY KCG    A ++F ++  +   SWT+MI  Y R G     +  F +MLE +  P+
Sbjct: 255 VLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD 314

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            + +  +L        +  GK+ H  IIR+   P+ + +  +L+  Y + G +S  E++ 
Sbjct: 315 GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPD-EMVDNSLLSMYCKFGMLSFAERLF 373

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               + +I  WN +I  Y R G + + ++L  +MQ  G+  +S  + S++++CG +G + 
Sbjct: 374 QR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEIN 432

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           LG  IH +VIK    +   V +SLI+MY KC   N+++ +F R  ++ V++WN++I    
Sbjct: 433 LGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHI 491

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
              +  EAI+LF  M +     +  T +  + ACS++  LEKG+ +H  +   G + ++ 
Sbjct: 492 HVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLP 551

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + TAL DMYAKCG L+ ++ VFDSM E++V+ W+AMI  YGM+G    A  +F  M +S 
Sbjct: 552 LGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESN 611

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           +KPNE+TF+++L AC+H+G VEEGK  F  M+ + V+P+L+HY CMVDLL RS ++E A 
Sbjct: 612 VKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCMVDLLGRSCNLEEAE 671

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           +++ SMP P +G +WGALL+ C+ H +I++   I K    +   ++GYY +++N+Y+  G
Sbjct: 672 ELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIG 731

Query: 716 NWDEFGKVRSIM-EVTGLKKVPGYSTI 741
            WDE   VR  M +   + K  G+S +
Sbjct: 732 RWDEAENVRRTMKDRCSMGKKAGWSMV 758


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/743 (32%), Positives = 402/743 (54%), Gaps = 9/743 (1%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT   NL++    H  +   GL  D      L++ Y++MG L+ +R VFD   + D
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRD 194

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     +    E++  +  M       S+    ++      L ++     +HG
Sbjct: 195 VVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHG 254

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + +  F     +   ++  Y + G +D AR+VFD+M  +D VSW +++A Y  N    E
Sbjct: 255 YVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 312

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M    V  + V+ +S   A  E   L   + IHG  L+++I  D  +    +V
Sbjct: 313 VLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV 372

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG+   A++ F  ++ R   +W+A+I+   ++G+ ++AL  F +M   K +PN +T
Sbjct: 373 MYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVT 432

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+++L +CA L  L+ GKS+HC  ++  M  +    G AL+  YA+CG  +      + +
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLS-TGTALVSMYAKCGFFTAALTTFNRM 491

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+I++WN LI+ YA+ G    A+++  +++   + PD+ ++   + AC  +  L  G 
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQN 477
            IHG ++K+  + D  V+++LIDMY+KCG    A  LF +    K  V WN +I  + QN
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G++ EAI+ FHQM L     + VTF++ + A + +    +G   H  +I  G   +  + 
Sbjct: 612 GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG 671

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L DMYAKCG L  ++++F+ M  ++ VSW+AM+  Y +HG  + A +LF  M +S ++
Sbjct: 672 NSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            + V+F+++L AC H G VEEG+  F++M   + ++PDL+HYACMVDLL R+G  +    
Sbjct: 732 IDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
            I  MP   +  +WGALL  CR+H  + + +     L      +  ++ +LS+IYA+ G 
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGR 851

Query: 717 WDEFGKVRSIMEVTGLKKVPGYS 739
           W + GK RS M   GLKK PG S
Sbjct: 852 WADAGKARSKMNDLGLKKTPGCS 874



 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 203/684 (29%), Positives = 360/684 (52%), Gaps = 7/684 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  SC +L  L ++HA ++V+G  +   + T LI  Y+       +R VFD+   P   +
Sbjct: 38  LLSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLYSLFHKCDLARSVFDSTPNPSRIL 96

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+ Y  +  + E++ +Y+ M+ +      + +  VL+AC+   +L  G   HG I 
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G ++D  I   ++  Y + G L  AR+VFDKM  RDVV+W+++IA    + D  E + 
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
            F SM   GVEP  V++L+L     +L ++   RSIHG+V RR       + N  I +YS
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYS 274

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGD+  A R F ++  +   SW  M++ Y  +G F + LE F KM       N ++ ++
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
              + A    L +GK +H   +++ +  +     P ++  YA+CG+  + +++   +  R
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV-MYAKCGETEKAKQLFWGLQGR 393

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           ++++W+ +I+   + G  +EAL L  +MQ   + P+  ++ S L AC ++  L+LG  IH
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
              +K D   +    ++L+ MY+KCGF   A   F R+  + +V WNS+I G+ Q G+  
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            AI++F+++ L+ +  D  T +  + AC+ +  L++G  +H  ++  G   D ++  AL 
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573

Query: 542 DMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
           DMYAKCG L +A+ +F+     ++ V+W+ +I  Y  +G   +A S F QM      PN 
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 633

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           VTF+++L A ++  +  EG  +   +   G   +      ++D+ ++ G +  + K+ + 
Sbjct: 634 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNE 693

Query: 661 MPFPANGSIWGALLNGCRIHKRID 684
           M      S W A+L+G  +H   D
Sbjct: 694 MDHKDTVS-WNAMLSGYAVHGHGD 716


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/744 (32%), Positives = 400/744 (53%), Gaps = 6/744 (0%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LFR+C++   +++  ++H  ++V G+      S+R++  Y   G  R +  +F   +   
Sbjct: 17  LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I+      +F+ ++L Y KM+    +   + +P V++AC  L ++     VH 
Sbjct: 77  ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
                GF  D    ++++  Y + G + DAR+VFD++  RD + W+ ++  Y  + D   
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  M       + VT   +   C    +      +HG V+    + D  + N+ + 
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG+LL A + F  + +  T +W  +I+ Y ++G+  +A   F  M+    +P+ +T
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + L S    G LR  K VH  I+R  + P   YL  ALI+ Y + G +    K+    
Sbjct: 317 FASFLPSILESGSLRHCKEVHSYIVRHRV-PFDVYLKSALIDVYFKGGDVEMARKIFQQN 375

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              ++     +IS Y   G++ +A+     +   G++ +S ++AS L AC  V +L+ G 
Sbjct: 376 ILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGK 435

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           ++H H++K   ++   V S++ DMY+KCG  +LAY  F R+  +  V WNSMI  F QNG
Sbjct: 436 ELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNG 495

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
               AI+LF QM ++  + D V+  +A+ A +N+  L  GK +H  +I      D ++ +
Sbjct: 496 KPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVAS 555

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
            L DMY+KCG+L  A  VF+ M  +N VSW+++I  YG HG   +   L+ +ML +GI P
Sbjct: 556 TLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHP 615

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + VTF+ I+ AC H+G V+EG  YF+ M R +G+   ++HYACMVDL  R+G +  AF  
Sbjct: 616 DHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDT 675

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I SMPF  +  +WG LL  CR+H  +++ K   + L      ++GYY LLSN++A+ G W
Sbjct: 676 IKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEW 735

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
               KVRS+M+  G++K+PGYS I
Sbjct: 736 ASVLKVRSLMKEKGVQKIPGYSWI 759



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 249/504 (49%), Gaps = 4/504 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+ RACS    +    +VH ++I  G        + +L  Y   G   DA  +F ++  R
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
             + W+ +I   +        L  +  M+   V PD  T   + +ACG L ++     +H
Sbjct: 76  YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
                    +D   G++ I +Y+  G +  A R F ++  R T  W  M+  Y +SG F 
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFD 195

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPA 338
            A+ +F +M       N +T   +L  CA  G    G  +H  +I  G G E+D  +   
Sbjct: 196 NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI--GSGFEFDPQVANT 253

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L+  Y++CG +    K+ + + + + ++WN LI+ Y + G + EA  L   M + G+ PD
Sbjct: 254 LVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 313

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
           S + AS L +    GSL+   ++H ++++     D +++S+LID+Y K G   +A  +F+
Sbjct: 314 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQ 373

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           +     V +  +MI G+  +G +++AIN F  +    +  + +T  + + AC+ +  L+ 
Sbjct: 374 QNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKP 433

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  ++   +   + + +A+TDMYAKCG L  A   F  MS+R+ V W++MI  +  
Sbjct: 434 GKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQ 493

Query: 578 HGQLNDAASLFKQMLDSGIKPNEV 601
           +G+   A  LF+QM  SG K + V
Sbjct: 494 NGKPEIAIDLFRQMGMSGAKFDSV 517



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 195/395 (49%), Gaps = 8/395 (2%)

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA--LIEFYAECGKMSECEKVIH 357
           L ++  +C+    +++ + VH Q+I  GMG   D   P+  ++  Y  CG+  +   +  
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMG---DVCAPSSRVLGLYVLCGRFRDAGNLFF 70

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  R  L WN +I      G    AL    +M    + PD ++    + ACG + ++ L
Sbjct: 71  ELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 130

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            + +H     +    D F  S+LI +Y+  G+   A  +F+ +  +  ++WN M+ G+ +
Sbjct: 131 CMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVK 190

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G+   AI  F +M  +   ++ VT+   +  C+  G    G  +H  +I  G   D  +
Sbjct: 191 SGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQV 250

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              L  MY+KCG+L  A+++F++M + + V+W+ +I  Y  +G  ++AA LF  M+ +G+
Sbjct: 251 ANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGV 310

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           KP+ VTF + L +   SGS+   K   + +    V  D+   + ++D+  + GD+E A K
Sbjct: 311 KPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARK 370

Query: 657 MIHSMPFPANGSIWGALLNGCRIHK-RIDVMKTIE 690
            I       + ++  A+++G  +H   ID + T  
Sbjct: 371 -IFQQNILVDVAVCTAMISGYVLHGLNIDAINTFR 404



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 204/448 (45%), Gaps = 36/448 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +LR    +H++++   + +D    + LI+ Y + G +  +R +F      D 
Sbjct: 321 LPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDV 380

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +   +I  Y+ +    ++I  +  +I+E    ++    SVL AC+++  L  G+++H  
Sbjct: 381 AVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCH 440

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K   +    + ++I   Y + G LD A + F +M+ RD V W+S+I+S+  N      
Sbjct: 441 ILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIA 500

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G + D V++ S   A   L +L   + +HG+V+R     D  + ++ I M
Sbjct: 501 IDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDM 560

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG+L  A   F  ++ +   SW ++I+ Y   G  ++ L+ + +ML     P+ +T 
Sbjct: 561 YSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTF 620

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++ +C   G + EG    HC     G+G        A +E YA               
Sbjct: 621 LVIISACGHAGLVDEGIHYFHCMTREYGIG--------ARMEHYA--------------- 657

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                     ++  Y R G   EA + +  M      PD+    + L AC   G+++L  
Sbjct: 658 ---------CMVDLYGRAGRVHEAFDTIKSMP---FTPDAGVWGTLLGACRLHGNVELAK 705

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
               H++++D K+      L ++++  G
Sbjct: 706 LASRHLLELDPKNSGYYVLLSNVHADAG 733


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/739 (32%), Positives = 407/739 (55%), Gaps = 20/739 (2%)

Query: 19   HLLVTG---LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H LV+G   L  D    TR+I  YA  GS   SR VFD  +  + F W  +I  Y  N  
Sbjct: 462  HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 521

Query: 76   FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            ++E +  + +MI     + + F YP V++AC+ + D+G G  VHG ++K G  +D  +  
Sbjct: 522  YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 581

Query: 135  SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE- 193
            +++  YG  G + DA ++FD M  R++VSW+S+I  + DN    E   +   M+ E  + 
Sbjct: 582  ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 641

Query: 194  ---PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
               PD  T++++   C     +   + +HG  ++ ++  +  L N+ + MYSKCG + +A
Sbjct: 642  AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 701

Query: 251  ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE--PNLITLITVLGSCA 308
            +  F     +   SW  M+  ++  G      +   +ML   E+   + +T++  +  C 
Sbjct: 702  QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 761

Query: 309  GLGWLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIHAIGERNIL 365
               +L   K +HC  +++    E+ Y   +  A +  YA+CG +S  ++V H I  + + 
Sbjct: 762  HESFLPSLKELHCYSLKQ----EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 817

Query: 366  SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            SWN LI  +A+    + +L+  +QM+  GL+PDSF+V S LSAC  + SL+LG ++HG +
Sbjct: 818  SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 877

Query: 426  IKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
            I+    +D FV  S++ +Y  CG       LF+ ++ KS+V WN++I G+ QNG    A+
Sbjct: 878  IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 937

Query: 485  NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
             +F QM L  +++  ++ +    ACS +  L  G+  H   + + +  D +I  +L DMY
Sbjct: 938  GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 997

Query: 545  AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            AK G +  + +VF+ + E++  SW+AMI  YG+HG   +A  LF++M  +G  P+++TF+
Sbjct: 998  AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 1057

Query: 605  NILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMI-HSMP 662
             +L AC+HSG + EG  Y + M+  FG++P+L+HYAC++D+L R+G ++ A +++   M 
Sbjct: 1058 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 1117

Query: 663  FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              A+  IW +LL+ CRIH+ +++ + +  +L          Y LLSN+YA  G W++  K
Sbjct: 1118 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 1177

Query: 723  VRSIMEVTGLKKVPGYSTI 741
            VR  M    L+K  G S I
Sbjct: 1178 VRQRMNEMSLRKDAGCSWI 1196



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/611 (27%), Positives = 313/611 (51%), Gaps = 24/611 (3%)

Query: 16   LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            +H  ++ TGL  D      L+  Y   G +  +  +FD   E +   W  +I+ +  N F
Sbjct: 564  VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 623

Query: 76   FEESILLYHKMIREQA------TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
             EES LL  +M+ E         ++  +  +VL  C+   ++G G+ VHG  +K   DK+
Sbjct: 624  SEESFLLLGEMMEENGDGAFMPDVATLV--TVLPVCAREREIGLGKGVHGWAVKLRLDKE 681

Query: 130  DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             V+  +++  Y + GC+ +A+ +F    +++VVSW++++  +    D      +   M+ 
Sbjct: 682  LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 741

Query: 190  --EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
              E V+ D VT+L+    C     L   + +H + L+++   +  + N+F+  Y+KCG L
Sbjct: 742  GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 801

Query: 248  LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
              A+R F  I  +   SW A+I  + +S   + +L++ ++M      P+  T+ ++L +C
Sbjct: 802  SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 861

Query: 308  AGLGWLREGKSVHCQIIRKGMGPE-YDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
            + L  LR GK VH  IIR  +  + + YL  +++  Y  CG++   + +  A+ +++++S
Sbjct: 862  SKLKSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVS 919

Query: 367  WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
            WN +I+ Y + G    AL +  QM  +G+     S+     AC  + SL+LG + H + +
Sbjct: 920  WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 979

Query: 427  KIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
            K   +D+ F+  SLIDMY+K G    +  +F  +++KS   WN+MI G+  +G + EAI 
Sbjct: 980  KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 1039

Query: 486  LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMY 544
            LF +M       D++TFL  + AC++ G + +G +++     S+G++ ++     + DM 
Sbjct: 1040 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 1099

Query: 545  AKCGDLQTAQRVF-DSMSER-NVVSWSAMIDCYGMHGQL----NDAASLFKQMLDSGIKP 598
             + G L  A RV  + MSE  +V  W +++    +H  L      AA LF+   +   KP
Sbjct: 1100 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE---KP 1156

Query: 599  NEVTFMNILWA 609
                 ++ L+A
Sbjct: 1157 ENYVLLSNLYA 1167



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 4/366 (1%)

Query: 10   LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
            L  L  LH + L     Y+   +   + SYA+ GSL  ++ VF   +      W  LI  
Sbjct: 766  LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 825

Query: 70   YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
            +  +N    S+  + +M        +F   S+L ACS L  L  G++VHG II+   ++D
Sbjct: 826  HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 885

Query: 130  DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
              +  S+L  Y   G L   + +FD M  + +VSW+++I  Y  N      L +F  MV 
Sbjct: 886  LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 945

Query: 190  EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             G++   ++M+ +  AC  L SLR  R  H + L+  ++ D  +  S I MY+K G +  
Sbjct: 946  YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 1005

Query: 250  AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
            + + F  ++++ T SW AMI  Y   G  ++A++ F +M      P+ +T + VL +C  
Sbjct: 1006 SSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 1065

Query: 310  LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI--HAIGERNILS 366
             G + EG     Q+    G+ P   +    +I+     G++ +  +V+      E ++  
Sbjct: 1066 SGLIHEGLRYLDQMKSSFGLKPNLKHYA-CVIDMLGRAGQLDKALRVVAEEMSEEADVGI 1124

Query: 367  WNMLIS 372
            W  L+S
Sbjct: 1125 WKSLLS 1130



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 201/501 (40%), Gaps = 65/501 (12%)

Query: 3    LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
            L  +C+ L+ L     +H  ++   L  D      ++  Y   G L + + +FD  ++  
Sbjct: 857  LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 916

Query: 60   SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
               W  +I  Y+ N F + ++ ++ +M+     +       V  ACS L  L  G + H 
Sbjct: 917  LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 976

Query: 120  RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
              +K   + D  I  S++  Y + G +  + KVF+ +  +   SW+++I  Y  +    E
Sbjct: 977  YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 1036

Query: 180  GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             +K+F  M R G  PD +T L +  AC            H  ++   ++    + +SF +
Sbjct: 1037 AIKLFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLIHEGLRYLDQMKSSFGL 1085

Query: 240  MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                               K     +  +I    R+G   KAL    +  E+ EE ++  
Sbjct: 1086 -------------------KPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGI 1124

Query: 300  LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              ++L SC     L  G+ V  ++    + PE       L   YA  GK  +  KV   +
Sbjct: 1125 WKSLLSSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 1182

Query: 360  GERNI-----LSW--------NMLISEYARKGMSK-EALELLVQMQ--TWGLMPDSFSVA 403
             E ++      SW        + ++ E    G  + ++L  +++M+    G  PD+ SV 
Sbjct: 1183 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 1242

Query: 404  SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS---LIDMYSK---CGFKNLAYLLFE 457
              LS    +       Q+ GH  K+      +++S    I +Y     C   + A  L  
Sbjct: 1243 HDLSEEEKIE------QLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLIS 1296

Query: 458  RIQQKSVVMWNSMICGFYQNG 478
            ++ ++ +V+ ++     ++NG
Sbjct: 1297 KVMEREIVVRDNKRFHHFKNG 1317


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/736 (32%), Positives = 391/736 (53%), Gaps = 5/736 (0%)

Query: 10  LRKLT-RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           LR+L   +HA   V G   D   +  L+  Y+ +G LR +R +FD     +   W  +I 
Sbjct: 33  LRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVIS 92

Query: 69  CYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
            Y  +   + +I L+    +    + N F+  SVLRAC+    +  GE+VHG  +K   D
Sbjct: 93  MYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLD 152

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            +  + T+++  Y + GC+D+A  VF  +  R  V+W+++I  Y         L++F  M
Sbjct: 153 ANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRM 212

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             EGV PD   + S   AC  L  L   R IHG+  R   + D  + N  I +Y KC  L
Sbjct: 213 GIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRL 272

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            +A + F  +E R   SWT MIS Y ++ +  +A+  F  M +   +P+     ++L SC
Sbjct: 273 SAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSC 332

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
             L  + +G+ +H  +I+  +  + +Y+  ALI+ YA+C  ++E   V  A+ E + +S+
Sbjct: 333 GSLAAIWQGRQIHAHVIKADLEAD-EYVKNALIDMYAKCEHLTEARAVFDALAEDDAISY 391

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +I  Y++     EA+ +  +M+ + L P   +  S L    +  +++L  QIHG +IK
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIK 451

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D +  S+LID+YSKC   N A  +F  +  K +V+WNSMI G  QN    EAI L
Sbjct: 452 SGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKL 511

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F+Q+ L+ +  +E TF+  +   S +  +  G+  H  +I  GV  D ++  AL DMYAK
Sbjct: 512 FNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAK 571

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG ++  + +F+S    +V+ W++MI  Y  HG   +A  +F+ M ++ ++PN VTF+ +
Sbjct: 572 CGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGV 631

Query: 607 LWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L AC+H+G V EG  +FN+M+  + +EP ++HYA +V+L  RSG +  A + I  MP   
Sbjct: 632 LSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKP 691

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
             ++W +LL+ C +    ++ +   +   +    D+G Y LLSNIYA +G W +   +R 
Sbjct: 692 AAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQ 751

Query: 726 IMEVTGLKKVPGYSTI 741
            M+ +G  K  G S I
Sbjct: 752 QMDSSGTVKETGCSWI 767



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/356 (20%), Positives = 157/356 (44%), Gaps = 31/356 (8%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ +G   D  A++ LI+ Y++   +  ++ VF+     D  +W  +I  +  N 
Sbjct: 444 QIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNE 503

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE+I L+++++      + F + +++   S+L  +  G++ H  IIK G D D  +  
Sbjct: 504 QGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSN 563

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G + + R +F+     DV+ W+S+I +Y  +    E L++F  M    VEP
Sbjct: 564 ALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEP 623

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN--SFIVMYSKCGDLLSAER 252
           ++VT + +  AC     +    + H + ++    I+  + +  S + ++ + G L +A+ 
Sbjct: 624 NYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKE 682

Query: 253 TFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP---------------- 295
              ++  K     W +++S  +  G     +  +   + +  +P                
Sbjct: 683 FIERMPIKPAAAVWRSLLSACHLFG--NAEIGRYAAEMALLADPTDSGPYVLLSNIYASK 740

Query: 296 -------NLITLITVLGSC--AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
                  NL   +   G+    G  W+   K VH  I+R    PE + +   L E 
Sbjct: 741 GLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDEL 796


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/747 (30%), Positives = 398/747 (53%), Gaps = 9/747 (1%)

Query: 3   LFRSCTNLRKLTRL----HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L  SC    +L RL    HA  +VTG   D   +  L+ +Y+++G +R +R +FD     
Sbjct: 16  LLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHK 75

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQA--TISNFIYPSVLRACSSLGDLGSGEK 116
           +   W   I  +  +   E+++ L+    R       + F+  S LRAC+    +  G++
Sbjct: 76  NLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQ 135

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VHG  ++ G D +  + T+++  Y + GC+D A  VFD +  ++ V+W+++I  Y     
Sbjct: 136 VHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQ 195

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
               L++F  M  +GV PD   + S   AC  L  L   R  HG+  R  ++ D  + N+
Sbjct: 196 GGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINA 255

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I +Y KC  L  A + F  +E R   SWT MI+ Y ++    +A+  F ++ +   +P+
Sbjct: 256 LIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPD 315

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +    ++L SC  L  + +G+ VH   I+  +  + +Y+  +LI+ YA+C  ++E   V 
Sbjct: 316 VFACASILNSCGSLAAIWQGRQVHAHAIKANLESD-EYVKNSLIDMYAKCEHLTEARAVF 374

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
            A+ E + +S+N +I  Y+R G    A+++  +M+   L P   +  S L    +  +++
Sbjct: 375 EALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIE 434

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           L  QIHG ++K     D +  SSLID+YSK      A  +F  +  + +V+WN+MI G  
Sbjct: 435 LSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLA 494

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           QN    EA+ LF+Q+ ++ L  +E TF+  +   S +  +  G+  H ++I  G   D +
Sbjct: 495 QNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHH 554

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           +  AL DMYAKCG ++  + +F+S   ++V+ W++MI  Y  HGQ  +A  +F+ M  +G
Sbjct: 555 VSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTG 614

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGA 654
           ++PN VTF+ +L AC+H+G V+EG  +F+ M+  + +EP  +HYA +V+L  RSG +  A
Sbjct: 615 VEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAA 674

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
            + I  MP     ++W +LL+ C +   +++ +   +   +    D+G   L+SNIYA  
Sbjct: 675 KEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASR 734

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G W +  K+R  M+  G+ K PGYS I
Sbjct: 735 GLWSDAQKLRQGMDCAGVVKEPGYSWI 761


>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/740 (32%), Positives = 403/740 (54%), Gaps = 47/740 (6%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++L+ L + HA ++ +G   +   +++LI  YA       S  +FD     D+F+W  +I
Sbjct: 46  SSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSII 105

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-F 126
           K +  N  +  ++  Y  M   +A  ++F  P ++ +C+ L  +  G  +HG + K G F
Sbjct: 106 KAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLF 165

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
                + +S +  Y + G L++A  VFD++  RDVV+W++++     N +   GL+    
Sbjct: 166 SGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCE 225

Query: 187 MVR---EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           M R   +G  P+F T+    +ACG L +L   R +HG V++  +     + +  + MYSK
Sbjct: 226 MHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSK 285

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG+   A R+F ++  +   SWT+MIS Y+R GW  + ++ F +ML     P+ I +  +
Sbjct: 286 CGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCM 345

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L S +    + E K+ H  IIR+    +   +  AL+  Y + G +   EK    + E+N
Sbjct: 346 LSSFSNSMRVFEAKAFHGLIIRRHYTLD-QMVQNALLSMYCKFGFLKLAEKFFGRVNEQN 404

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
             +WN+++S Y                                      G+  L   IH 
Sbjct: 405 FEAWNLMVSGY--------------------------------------GATHLARSIHC 426

Query: 424 HVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           ++IK +  DE   V +SLIDMY K G   +A  +F RI  + +V WN++I  +   G+  
Sbjct: 427 YMIK-NLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFA 484

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           EA++L+ +M L  L+ +  T ++ + ACS++  LE+G+ VH+ +       ++ I TAL 
Sbjct: 485 EALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALI 544

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           DMYAKCG L+ ++ +F+SM ER+V++W+ MI  YGMHG    A   F+QM +S  KPN +
Sbjct: 545 DMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGL 604

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           TF+ +L AC+H+G V+EGK+ F  M+ + V P+L+HYACMVDLL RSG+++ A  ++ SM
Sbjct: 605 TFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSM 664

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   +G +WGALL+ C+IH  I++   I K    +   ++GYY ++SN+Y+  G W+E  
Sbjct: 665 PISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKWEEAE 724

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           K R IM+  G++K  G+S +
Sbjct: 725 KARGIMKERGVRKKTGWSAV 744



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 246/563 (43%), Gaps = 71/563 (12%)

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           ++ SL+     H  ++      +  + +  I +Y+       +   F +I  R    W +
Sbjct: 44  QISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNS 103

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I  +  +G + +AL+ +  M   +  PN  T+  ++ SCA L  +  G+S+H  + + G
Sbjct: 104 IIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLG 163

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +      +G + +  Y++CG + E   V   I  R++++W  L+    + G SK  LE L
Sbjct: 164 LFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECL 223

Query: 388 VQMQTWG---LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
            +M   G     P+  ++     ACGN+G+L  G  +HG V+K      + VQS L+ MY
Sbjct: 224 CEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMY 283

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           SKCG    A+  F  +  K ++ W SMI  + + G + E I++F +M ++ +  D +   
Sbjct: 284 SKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVIS 343

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
             + + SN  ++ + K  H  +I      D  +  AL  MY K G L+ A++ F  ++E+
Sbjct: 344 CMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQ 403

Query: 564 NVVSWSAM--------------------------------IDCYGMHGQLNDAASLF--- 588
           N  +W+ M                                ID YG  G L  A  +F   
Sbjct: 404 NFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRI 463

Query: 589 ---------------------------KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
                                       +M+   +KPN  T +++L ACSH  S+EEG+ 
Sbjct: 464 PRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEK 523

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
             N +     E +L     ++D+ ++ G +E + ++ +SM    +   W  +++G  +H 
Sbjct: 524 VHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSM-HERDVITWNVMISGYGMHG 582

Query: 682 RIDVMKTIE--KELSVTGTNDNG 702
             D    IE  +++  +    NG
Sbjct: 583 --DARSAIEFFQQMEESSAKPNG 603



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 251/579 (43%), Gaps = 90/579 (15%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           F++C NL  L     LH  ++ TG+ Y     + L+  Y++ G+   +   F      D 
Sbjct: 245 FQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDI 304

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y    +  E I ++ +M+         +   +L + S+   +   +  HG 
Sbjct: 305 ISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGL 364

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           II+  +  D ++Q ++L  Y +FG L  A K F ++  ++  +W+ +++ Y         
Sbjct: 365 IIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGY--------- 415

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
                                         +   ARSIH ++++  +  +  + NS I M
Sbjct: 416 -----------------------------GATHLARSIHCYMIKNLMDENVSVNNSLIDM 446

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y K G+L  A R F +I +   T W  +IS Y   G F +AL  + KM+    +PN  TL
Sbjct: 447 YGKSGNLTIARRIFCRIPRDIVT-WNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATL 505

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAI 359
           ++VL +C+ L  L EG+ VH  I   G   E++  +  ALI+ YA+CG++ +  ++ +++
Sbjct: 506 VSVLSACSHLASLEEGEKVHNYI--NGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSM 563

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ER++++WN++IS Y   G ++ A+E   QM+     P+  +  + LSAC + G ++ G 
Sbjct: 564 HERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEG- 622

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV----MWNSMICGFY 475
                                              LF ++Q  SV      +  M+    
Sbjct: 623 ---------------------------------KYLFGKMQDYSVAPNLKHYACMVDLLG 649

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           ++GN  EA  L   M ++    D   +   + +C    ++E G  +    I   V  D Y
Sbjct: 650 RSGNLQEAEALVLSMPIS---PDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGY 706

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNV---VSWSAM 571
               +++MY+  G  + A++    M ER V     WSA+
Sbjct: 707 Y-VMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 744


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/690 (33%), Positives = 390/690 (56%), Gaps = 6/690 (0%)

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
           +F  P +  +  +I        F + +L Y  M+          +PS+++AC+SL     
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G   H R+I  G+  D  I TS++  Y +FG    ARKVFD M  R+VV W+++I  Y  
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             +      M++ M R+G++P  VTML L     EL  L+    +H  V++     D  L
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVAL 183

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            NS + +Y KCG +  A+  F  ++ R   SW +++S Y + G  ++ L+  ++M     
Sbjct: 184 ANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           EP+  T  +++ + A    L  GK VH  I+R G+  +  ++  +LI  Y +CG ++   
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQD-SHIETSLIGMYLKCGNVNSAF 302

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           ++   +  ++++SW  +IS   +   +  A+ +  +M    +MP + ++AS L+AC  +G
Sbjct: 303 RIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELG 362

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           S  LG  +HG++++   K D   Q+SL+ MY+KCG    +  +F+R+ ++ +V WN+++ 
Sbjct: 363 SFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVS 422

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G  QNG+  +A+ LF++M       D +T ++ +QAC++IG L +GKW+H+ +    +  
Sbjct: 423 GHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGP 482

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            I IDTAL DMY+KCGDL +AQ+ FD M ++++VSWS++I  YG HG+   A  ++   L
Sbjct: 483 CILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFL 542

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
            +GI+PN V +++IL ACSH+G V++G  +F++M + FG+EP L+H AC+VDLLSR+G +
Sbjct: 543 HTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRV 602

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           E A+     M    +  + G LL+ CR    +++   + +E+ +    + G Y  L++ Y
Sbjct: 603 EEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSY 662

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A    WD  G+V + M+   LKK+PG+S I
Sbjct: 663 ASMKRWDGVGEVWTQMKSLHLKKLPGWSFI 692



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 294/564 (52%), Gaps = 11/564 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++CT+L   +     H  ++V G   D   +T LI  Y++ G  +S+R VFDT  + +
Sbjct: 54  LVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRN 113

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I CY      + +  +Y+ M R+    S+     +L     L  L   + +H 
Sbjct: 114 VVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHA 170

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+ GF  D  +  S+L  Y + G ++DA+ +F+ M +RDV+SW+S+++ Y    ++ E
Sbjct: 171 CVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIRE 230

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++   M  +G+EPD  T  SL  A      L   + +HGH+LR  ++ D  +  S I 
Sbjct: 231 VLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIG 290

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG++ SA R F  +  +   SWTAMIS   ++     A+  F +ML+ +  P+  T
Sbjct: 291 MYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTAT 350

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +VL +CA LG    G SVH  I+R+ +  +      +L+  YA+CG + +   V   +
Sbjct: 351 IASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQN-SLVTMYAKCGHLEQSCSVFDRM 409

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+I+SWN ++S +A+ G   +AL L  +M+     PDS +V S L AC ++G+L  G 
Sbjct: 410 SRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGK 469

Query: 420 QIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            IH  V K  C      + ++L+DMYSKCG    A   F+R+ Q+ +V W+S+I G+  +
Sbjct: 470 WIHNFVTK-SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSH 528

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
           G    A+ ++       ++ + V +L+ + ACS+ G +++G    H +   +G+   +  
Sbjct: 529 GKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEH 588

Query: 537 DTALTDMYAKCGDLQTAQRVFDSM 560
              + D+ ++ G ++ A   +  M
Sbjct: 589 RACIVDLLSRAGRVEEAYSFYKRM 612



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 241/463 (52%), Gaps = 5/463 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L      L  L  LHA ++  G   D   +  ++  Y + G +  ++ +F+     D   
Sbjct: 155 LLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVIS 214

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L+  Y       E + L  +M  +        + S++ A +    LG G+ VHG I+
Sbjct: 215 WNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHIL 274

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G ++D  I+TS++  Y + G ++ A ++F+ M  +DV+SW+++I+    N      + 
Sbjct: 275 RAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVT 334

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M++  V P   T+ S+  AC EL S     S+HG++LR++IK+D P  NS + MY+
Sbjct: 335 VFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYA 394

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG L  +   F ++ +R   SW A++S + ++G   KAL  F +M + ++ P+ IT+++
Sbjct: 395 KCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVS 454

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +CA +G L +GK +H  + +  +GP    +  AL++ Y++CG +   +K    + ++
Sbjct: 455 LLQACASIGALHQGKWIHNFVTKSCLGPCI-LIDTALVDMYSKCGDLGSAQKCFDRMPQQ 513

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++SW+ +I+ Y   G  + AL +       G+ P+     S LSAC + G +  GL   
Sbjct: 514 DLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFF 573

Query: 423 GHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
             + K   I+ + E  ++ ++D+ S+ G    AY  ++R+  K
Sbjct: 574 HSMTKDFGIEPRLEH-RACIVDLLSRAGRVEEAYSFYKRMFPK 615


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/737 (33%), Positives = 402/737 (54%), Gaps = 12/737 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  + +GL   P  + +L+ +Y+  G    + L F     PD+F+W  L++     + 
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD---VI 132
           F  ++  + +M    A  S F  P V  A + LG L  G  VH   ++ G  + D    +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-- 190
            +S++  Y   G + DA ++FD+M  RDVV+W+++I+    N    EGL     MVR   
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 191 --GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G  P+  TM S  EACG L  L     +HG  ++  +     + +S   MY+KC    
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F ++ ++   SWT++I  Y R+G  +KA+E F+ M E   +P+ + +  +L    
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               +R GK+ H  I+R+  G     +G ALI  YA+C ++     V   + +R+  SW+
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSV-LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWS 386

Query: 369 MLISEYARKGMSKEALELLVQMQTWG---LMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            ++  Y + G+  + LEL  +MQ         D+ S+ S +S+C  +G L+LG   H + 
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYS 446

Query: 426 IK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           IK +  ++  V ++LI MY +CG  ++A  +F  ++ K VV W+++I  +   G+S +A+
Sbjct: 447 IKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDAL 506

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            L+ QM    ++ +  T ++ I +C+N+  LE G+ +H  +   G+  D+ I TAL DMY
Sbjct: 507 LLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMY 566

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KCG L  A+++FDSM ER+VV+W+ MI  YGMHG+   A  LF  M    +KPN +TF+
Sbjct: 567 MKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFL 626

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            IL AC H+G V++G+  F  M  + +EP+L+HYACMVDLL +SG ++ A  ++ +MP  
Sbjct: 627 AILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            +G IWG LL  C++H   ++   + K+   +   ++GYY L+SN Y     W+E  K+R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746

Query: 725 SIMEVTGLKKVPGYSTI 741
            +M+  G++K  G+STI
Sbjct: 747 DMMKNHGVEKSIGWSTI 763


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/731 (32%), Positives = 398/731 (54%), Gaps = 5/731 (0%)

Query: 15  RLHAHLLVTGLHYDPP-ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +LHAH L T  + D     T+ +  Y + GS   +  VFD   E   F W  +I   +  
Sbjct: 67  QLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSA 126

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             + E+I LY +M     ++  F +P VL+AC +  +   G ++HG  +KCG+     + 
Sbjct: 127 GRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVC 186

Query: 134 TSILCTYGEFGCLDDARKVFDK--MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
            +++  Y + G L  AR +FD   M   D VSW+SII+++    +  E L +F  M   G
Sbjct: 187 NALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG 246

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           VE +  T +S  +AC     ++  R IH  +L+     D  + N+ I MY+ CG +  AE
Sbjct: 247 VESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAE 306

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R F  +  +   SW  ++S   ++  +  A+  F  M +  ++P+ ++++ ++ +     
Sbjct: 307 RVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSA 366

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  G  VH   I+ G+     ++G +LI+ Y +C  +         + E++++SW  +I
Sbjct: 367 NLLAGMEVHAYAIKHGIDSNM-HIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTII 425

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           + YA+     +AL LL ++Q   +  D   + S L AC  + S +L  +IHG+V+K    
Sbjct: 426 AGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA 485

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  +Q++++++Y +    + A  +FE I  K +V W SMI     NG ++EA+ LF+ + 
Sbjct: 486 DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI 545

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              +E D +T ++ + A + +  L+KGK +H  LI  G   +  I  +L DMYA+CG ++
Sbjct: 546 ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTME 605

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+ +F+ + +R+++ W++MI+  GMHG   DA  LF +M D  + P+ +TF+ +L+ACS
Sbjct: 606 NARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS 665

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           HSG V EGK +F  M+  + +EP  +HYAC+VDLL+RS  +E A+  + +MP   +  +W
Sbjct: 666 HSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVW 725

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
            ALL  CRIH   D+ +   K+L    T ++G Y L+SN +A +G W++  +VRSIM+  
Sbjct: 726 CALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGN 785

Query: 731 GLKKVPGYSTI 741
            LKK PG S I
Sbjct: 786 KLKKKPGCSWI 796



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 169/316 (53%), Gaps = 3/316 (0%)

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA    L +G+ +H   ++     +  +L    +  Y +CG   +  KV   + ER I +
Sbjct: 56  CASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFT 115

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +I      G   EA+EL  +M+  G+  D+F+    L ACG     +LG +IHG  +
Sbjct: 116 WNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAV 175

Query: 427 KIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEA 483
           K       FV ++LI MY+KCG    A +LF+   +++   V WNS+I      G SLEA
Sbjct: 176 KCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEA 235

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           ++LF +M    +E +  TF++A+QAC     ++ G+ +H  ++      D+Y+  AL  M
Sbjct: 236 LSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAM 295

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YA CG ++ A+RVF SM  ++ VSW+ ++     +   +DA + F+ M DSG KP++V+ 
Sbjct: 296 YANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSV 355

Query: 604 MNILWACSHSGSVEEG 619
           +N++ A   S ++  G
Sbjct: 356 LNMIAASGRSANLLAG 371



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 170/318 (53%), Gaps = 2/318 (0%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
            NL     +HA+ +  G+  +      LI+ Y +   ++     F+   E D   W  +I
Sbjct: 366 ANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTII 425

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y  N    +++ L  K+  E+  +   +  S+L ACS L      +++HG ++K G  
Sbjct: 426 AGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL- 484

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            D +IQ +I+  YGE   +D AR VF+ + S+D+VSW+S+I     N    E L++F+S+
Sbjct: 485 ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSL 544

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           +   +EPD +T++S+  A   L SL+  + IHG ++R+   ++G + NS + MY++CG +
Sbjct: 545 IETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTM 604

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            +A   F  +++R    WT+MI+     G  + A++ F KM +    P+ IT + +L +C
Sbjct: 605 ENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYAC 664

Query: 308 AGLGWLREGKSVHCQIIR 325
           +  G + EGK  H +I++
Sbjct: 665 SHSGLVVEGKQ-HFEIMK 681


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/737 (33%), Positives = 402/737 (54%), Gaps = 12/737 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  + +GL   P  + +L+ +Y+  G    + L F     PD+F+W  L++     + 
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD---VI 132
           F  ++  + +M    A  S F  P V  A + LG L  G  VH   ++ G  + D    +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-- 190
            +S++  Y   G + DA ++FD+M  RDVV+W+++I+    N    EGL     MVR   
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 191 --GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G  P+  TM S  EACG L  L     +HG  ++  +     + +S   MY+KC    
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F ++ ++   SWT++I  Y R+G  +KA+E F+ M E   +P+ + +  +L    
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               +R GK+ H  I+R+  G     +G ALI  YA+C ++     V   + +R+  SW+
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSV-LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWS 386

Query: 369 MLISEYARKGMSKEALELLVQMQTWG---LMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            ++  Y + G+  + LEL  +MQ         D+ S+ S +S+C  +G L+LG   H + 
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYS 446

Query: 426 IK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           IK +  ++  V ++LI MY +CG  ++A  +F  ++ K VV W+++I  +   G+S +A+
Sbjct: 447 IKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDAL 506

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            L+ QM    ++ +  T ++ I +C+N+  LE G+ +H  +   G+  D+ I TAL DMY
Sbjct: 507 LLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMY 566

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KCG L  A+++FDSM ER+VV+W+ MI  YGMHG+   A  LF  M    +KPN +TF+
Sbjct: 567 MKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFL 626

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            IL AC H+G V++G+  F  M  + +EP+L+HYACMVDLL +SG ++ A  ++ +MP  
Sbjct: 627 AILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            +G IWG LL  C++H   ++   + K+   +   ++GYY L+SN Y     W+E  K+R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746

Query: 725 SIMEVTGLKKVPGYSTI 741
            +M+  G++K  G+STI
Sbjct: 747 DMMKNHGVEKSIGWSTI 763


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/662 (35%), Positives = 378/662 (57%), Gaps = 8/662 (1%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           Y  M++       + +PS+L+ACS L     G  +H RI+  G   D  I +S++  Y +
Sbjct: 49  YASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAK 108

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FG  D ARKVFD M  R+VV W++II  Y     V E   +F  M R+G++P  VT+LSL
Sbjct: 109 FGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSL 168

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
                EL  ++    +HG  +      D  L NS + +Y KCG++  + + F  ++ R  
Sbjct: 169 LFGVSELAHVQ---CLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDL 225

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW ++IS Y + G   + L     M     E    T  +VL   A  G L+ G+ +H Q
Sbjct: 226 VSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQ 285

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I+R G   +  ++  +LI  Y + GK+    ++     +++++ W  +IS   + G + +
Sbjct: 286 ILRAGFYLD-AHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADK 344

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
           AL +  QM  +G+ P + ++AS ++AC  +GS  LG  I G++++ +   D   Q+SL+ 
Sbjct: 345 ALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVT 404

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY+KCG  + + ++F+ + ++ +V WN+M+ G+ QNG   EA+ LF++M  +    D +T
Sbjct: 405 MYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSIT 464

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            ++ +Q C++ GQL  GKW+H  +I  G+R  I +DT+L DMY KCGDL TAQR F+ M 
Sbjct: 465 IVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMP 524

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
             ++VSWSA+I  YG HG+   A   + + L+SG+KPN V F+++L +CSH+G VE+G  
Sbjct: 525 SHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLN 584

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRI 679
            + +M + FG+ PDL+H+AC+VDLLSR+G +E A+  ++   FP     + G +L+ CR 
Sbjct: 585 IYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYN-VYKKKFPDPVLDVLGIILDACRA 643

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +   ++  TI  ++ +    D G +  L++ YA    W+E G+  + M   GLKK+PG+S
Sbjct: 644 NGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWS 703

Query: 740 TI 741
            I
Sbjct: 704 FI 705



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 172/563 (30%), Positives = 295/563 (52%), Gaps = 15/563 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C+ L   +    LH  +LV+GL  D   ++ LI  YA+ G    +R VFD   E +
Sbjct: 67  LLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERN 126

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I CY       E+  L+ +M R+    S+    S+L   S L  +   + +HG
Sbjct: 127 VVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHG 183

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             I  GF  D  +  S+L  YG+ G ++ +RK+FD M  RD+VSW+S+I++Y    ++ E
Sbjct: 184 CAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICE 243

Query: 180 GLKMFHSMVREGVEP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            L +  +M  +G E     F ++LS+A + GE   L+  R +HG +LR    +D  +  S
Sbjct: 244 VLLLLKTMRLQGFEAGPQTFGSVLSVAASRGE---LKLGRCLHGQILRAGFYLDAHVETS 300

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            IV+Y K G +  A R F +   +    WTAMIS   ++G   KAL  F +ML+   +P+
Sbjct: 301 LIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPS 360

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T+ +V+ +CA LG    G S+   I+R+ + P       +L+  YA+CG + +   V 
Sbjct: 361 TATMASVITACAQLGSYNLGTSILGYILRQEL-PLDVATQNSLVTMYAKCGHLDQSSIVF 419

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  R+++SWN +++ YA+ G   EAL L  +M++    PDS ++ S L  C + G L 
Sbjct: 420 DMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLH 479

Query: 417 LGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           LG  IH  VI+   +    V +SL+DMY KCG  + A   F ++    +V W+++I G+ 
Sbjct: 480 LGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYG 539

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDI 534
            +G    A+  + +   + ++ + V FL+ + +CS+ G +E+G  ++  +   +G+  D+
Sbjct: 540 YHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDL 599

Query: 535 YIDTALTDMYAKCGDLQTAQRVF 557
                + D+ ++ G ++ A  V+
Sbjct: 600 EHHACVVDLLSRAGRVEEAYNVY 622



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 261/507 (51%), Gaps = 14/507 (2%)

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  + SM++  V  D  T  SL +AC  L       ++H  +L   + +D  + +S I  
Sbjct: 46  LATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINF 105

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+K G    A + F  + +R    WT +I CY+R+G   +A   F +M     +P+ +T+
Sbjct: 106 YAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTV 165

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L    G+  L   + +H   I  G   + + L  +++  Y +CG +    K+   + 
Sbjct: 166 LSLL---FGVSELAHVQCLHGCAILYGFMSDIN-LSNSMLNVYGKCGNIEYSRKLFDYMD 221

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R+++SWN LIS YA+ G   E L LL  M+  G      +  S LS   + G L+LG  
Sbjct: 222 HRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRC 281

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +HG +++     D  V++SLI +Y K G  ++A+ +FER   K VV+W +MI G  QNG+
Sbjct: 282 LHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGS 341

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
           + +A+ +F QM    ++    T  + I AC+ +G    G      ++ Y +R+++ +D A
Sbjct: 342 ADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGT----SILGYILRQELPLDVA 397

Query: 540 ----LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
               L  MYAKCG L  +  VFD M+ R++VSW+AM+  Y  +G + +A  LF +M    
Sbjct: 398 TQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDN 457

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
             P+ +T +++L  C+ +G +  GK+  + +   G+ P +     +VD+  + GD++ A 
Sbjct: 458 QTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQ 517

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKR 682
           +  + MP   +   W A++ G   H +
Sbjct: 518 RCFNQMP-SHDLVSWSAIIVGYGYHGK 543



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 234/460 (50%), Gaps = 3/460 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L    + L  +  LH   ++ G   D   S  ++  Y + G++  SR +FD     D 
Sbjct: 166 LSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDL 225

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  LI  Y       E +LL   M  +        + SVL   +S G+L  G  +HG+
Sbjct: 226 VSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQ 285

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I++ GF  D  ++TS++  Y + G +D A ++F++ + +DVV W+++I+    N    + 
Sbjct: 286 ILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKA 345

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M++ GV+P   TM S+  AC +L S     SI G++LR+++ +D    NS + M
Sbjct: 346 LAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTM 405

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L  +   F  + +R   SW AM++ Y ++G+  +AL  F +M    + P+ IT+
Sbjct: 406 YAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITI 465

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L  CA  G L  GK +H  +IR G+ P    +  +L++ Y +CG +   ++  + + 
Sbjct: 466 VSLLQGCASTGQLHLGKWIHSFVIRNGLRPCI-LVDTSLVDMYCKCGDLDTAQRCFNQMP 524

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             +++SW+ +I  Y   G  + AL    +    G+ P+     S LS+C + G ++ GL 
Sbjct: 525 SHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLN 584

Query: 421 IHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
           I+  + K      D    + ++D+ S+ G    AY ++++
Sbjct: 585 IYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKK 624



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 156/312 (50%), Gaps = 5/312 (1%)

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           S N  I+ ++ +G   + L     M    +  D+++  S L AC  +    LGL +H  +
Sbjct: 28  SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87

Query: 426 IKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +      D ++ SSLI+ Y+K GF ++A  +F+ + +++VV W ++I  + + G   EA 
Sbjct: 88  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
           +LF +M    ++   VT L+ +   S +  ++    +H   I YG   DI +  ++ ++Y
Sbjct: 148 SLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQ---CLHGCAILYGFMSDINLSNSMLNVY 204

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KCG+++ ++++FD M  R++VSW+++I  Y   G + +   L K M   G +    TF 
Sbjct: 205 GKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFG 264

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           ++L   +  G ++ G+     +   G   D      ++ +  + G I+ AF+M       
Sbjct: 265 SVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSS-D 323

Query: 665 ANGSIWGALLNG 676
            +  +W A+++G
Sbjct: 324 KDVVLWTAMISG 335


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/740 (32%), Positives = 405/740 (54%), Gaps = 8/740 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-FMWA 64
           S  N  +L  +H+ ++ +GL      S +LI  YA++    SS  VF +    ++ ++W 
Sbjct: 31  SAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWN 90

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I+    N  F +++  Y +M  ++     F +PSV+ +C+ + DL  G  VH   ++ 
Sbjct: 91  SIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEM 150

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ D  I  +++  Y  F  LD+AR VF++M++RD VSW+S+I+ Y  N    + L M+
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           H     G+ PD  TM S+  ACG L +++   ++HG + +  I  D  +GN  + MY K 
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
             L  A R F K+  + + +W  MI  Y + G  + +++ F+ M++    P+++++ + +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG-PALIEFYAECGKMSECEKVIHAIGERN 363
            +C   G L+ GK VH  +I  G G E D +    LI+ YA+CG +   ++V      ++
Sbjct: 330 RACGQSGDLQVGKFVHKYLI--GSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            ++WN LI+ Y + G  KE LE   +M      PDS +    LS    +  +  G  IH 
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHC 446

Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            VIK   + E  + +SL+D+Y+KCG  +    +F  +    ++ WN++I       +   
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTV 506

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
              + ++M    L  DE T L  +  CS +    +GK +H  +   G   ++ I  AL +
Sbjct: 507 GFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG L+   +VF  M E++VV+W+A+I  +GM+G+   A   F+ M  SG+ P+ V 
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+  ++ACSHSG V+EG  +F+ M+  + +EP ++HYAC+VDLL+RSG +  A + I SM
Sbjct: 627 FIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSM 686

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   + S+WGALL+ CR     ++ + + K++    ++D GYY L+SNIYA  G WD+  
Sbjct: 687 PMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVK 746

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
            VR+ M+  GLKK PG S I
Sbjct: 747 TVRNSMKTKGLKKEPGSSWI 766


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/690 (33%), Positives = 390/690 (56%), Gaps = 6/690 (0%)

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
           +F  P +  +  +I        F + +L Y  M+          +PS+++AC+SL     
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G   H R+I  G+  D  I TS++  Y +FG    ARKVFD M  R+VV W+++I  Y  
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             +      M++ M R+G++P  VTML L     EL  L+    +H  V++     D  L
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVAL 183

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            NS + +Y KCG +  A+  F  ++ R   SW +++S Y + G  ++ L+  ++M     
Sbjct: 184 ANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           EP+  T  +++ + A    L  GK VH  I+R G+  +  ++  +LI  Y +CG ++   
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQD-SHIETSLIGMYLKCGNVNSAF 302

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           ++   +  ++++SW  +IS   +   +  A+ +  +M    +MP + ++AS L+AC  +G
Sbjct: 303 RIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELG 362

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           S  LG  +HG++++   K D   Q+SL+ MY+KCG    +  +F+R+ ++ +V WN+++ 
Sbjct: 363 SFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVS 422

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G  QNG+  +A+ LF++M       D +T ++ +QAC++IG L +GKW+H+ +    +  
Sbjct: 423 GHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGP 482

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            I IDTAL DMY+KCGDL +AQ+ FD M ++++VSWS++I  YG HG+   A  ++   L
Sbjct: 483 CILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFL 542

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
            +GI+PN V +++IL ACSH+G V++G  +F++M + FG+EP L+H AC+VDLLSR+G +
Sbjct: 543 HTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRV 602

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           E A+     M    +  + G LL+ CR    +++   + +E+ +    + G Y  L++ Y
Sbjct: 603 EEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSY 662

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A    WD  G+V + M+   LKK+PG+S I
Sbjct: 663 ASMKRWDGVGEVWTQMKSLHLKKLPGWSFI 692



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 294/564 (52%), Gaps = 11/564 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++CT+L   +     H  ++V G   D   +T LI  Y++ G  +S+R VFDT  + +
Sbjct: 54  LVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRN 113

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I CY      + +  +Y+ M R+    S+     +L     L  L   + +H 
Sbjct: 114 VVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHA 170

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+ GF  D  +  S+L  Y + G ++DA+ +F+ M +RDV+SW+S+++ Y    ++ E
Sbjct: 171 CVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIRE 230

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++   M  +G+EPD  T  SL  A      L   + +HGH+LR  ++ D  +  S I 
Sbjct: 231 VLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIG 290

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG++ SA R F  +  +   SWTAMIS   ++     A+  F +ML+ +  P+  T
Sbjct: 291 MYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTAT 350

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +VL +CA LG    G SVH  I+R+ +  +      +L+  YA+CG + +   V   +
Sbjct: 351 IASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQN-SLVTMYAKCGHLEQSCSVFDRM 409

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+I+SWN ++S +A+ G   +AL L  +M+     PDS +V S L AC ++G+L  G 
Sbjct: 410 SRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGK 469

Query: 420 QIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            IH  V K  C      + ++L+DMYSKCG    A   F+R+ Q+ +V W+S+I G+  +
Sbjct: 470 WIHNFVTK-SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSH 528

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYI 536
           G    A+ ++       ++ + V +L+ + ACS+ G +++G  + H     +G+   +  
Sbjct: 529 GKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEH 588

Query: 537 DTALTDMYAKCGDLQTAQRVFDSM 560
              + D+ ++ G ++ A   +  M
Sbjct: 589 RACIVDLLSRAGRVEEAYSFYKRM 612



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 241/463 (52%), Gaps = 5/463 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L      L  L  LHA ++  G   D   +  ++  Y + G +  ++ +F+     D   
Sbjct: 155 LLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVIS 214

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L+  Y       E + L  +M  +        + S++ A +    LG G+ VHG I+
Sbjct: 215 WNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHIL 274

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G ++D  I+TS++  Y + G ++ A ++F+ M  +DV+SW+++I+    N      + 
Sbjct: 275 RAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVT 334

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M++  V P   T+ S+  AC EL S     S+HG++LR++IK+D P  NS + MY+
Sbjct: 335 VFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYA 394

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG L  +   F ++ +R   SW A++S + ++G   KAL  F +M + ++ P+ IT+++
Sbjct: 395 KCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVS 454

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +CA +G L +GK +H  + +  +GP    +  AL++ Y++CG +   +K    + ++
Sbjct: 455 LLQACASIGALHQGKWIHNFVTKSCLGPCI-LIDTALVDMYSKCGDLGSAQKCFDRMPQQ 513

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++SW+ +I+ Y   G  + AL +       G+ P+     S LSAC + G +  GL   
Sbjct: 514 DLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFF 573

Query: 423 GHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
             + K   I+ + E  ++ ++D+ S+ G    AY  ++R+  K
Sbjct: 574 HSMTKDFGIEPRLEH-RACIVDLLSRAGRVEEAYSFYKRMFPK 615


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/737 (33%), Positives = 402/737 (54%), Gaps = 12/737 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  + +GL   P  + +L+ +Y+  G    + L F     PD+F+W  L++     + 
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD---VI 132
           F  ++  + +M    A  S F  P V  A + LG L  G  VH   ++ G  + D    +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-- 190
            +S++  Y   G + DA ++FD+M  RDVV+W+++I+    N    EGL     MVR   
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 191 --GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G  P+  TM S  EACG L  L     +HG  ++  +     + +S   MY+KC    
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F ++ ++   SWT++I  Y R+G  +KA+E F+ M E   +P+ + +  +L    
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               +R GK+ H  I+R+  G     +G ALI  YA+C ++     V   + +R+  SW+
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSV-LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWS 386

Query: 369 MLISEYARKGMSKEALELLVQMQTWG---LMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            ++  Y + G+  + LEL  +MQ         D+ S+ S +S+C  +G L+LG   H + 
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYS 446

Query: 426 IK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           IK +  ++  V ++LI MY +CG  ++A  +F  ++ K VV W+++I  +   G+S +A+
Sbjct: 447 IKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDAL 506

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            L+ QM    ++ +  T ++ I +C+N+  LE G+ +H  +   G+  D+ I TAL DMY
Sbjct: 507 LLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMY 566

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KCG L  A+++FDSM ER+VV+W+ MI  YGMHG+   A  LF  M    +KPN +TF+
Sbjct: 567 MKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFL 626

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            IL AC H+G V++G+  F  M  + +EP+L+HYACMVDLL +SG ++ A  ++ +MP  
Sbjct: 627 AILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            +G IWG LL  C++H   ++   + K+   +   ++GYY L+SN Y     W+E  K+R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746

Query: 725 SIMEVTGLKKVPGYSTI 741
            +M+  G++K  G+STI
Sbjct: 747 DMMKNHGVEKSIGWSTI 763


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/740 (32%), Positives = 405/740 (54%), Gaps = 8/740 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-FMWA 64
           S  N  +L  +H+ ++ +GL      S +LI  YA++    SS  VF +    ++ ++W 
Sbjct: 31  SAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWN 90

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I+    N  F +++  Y +M  ++     F +PSV+ +C+ + DL  G  VH   ++ 
Sbjct: 91  SIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEM 150

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ D  I  +++  Y  F  LD+AR VF++M++RD VSW+S+I+ Y  N    + L M+
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           H     G+ PD  TM S+  ACG L +++   ++HG + +  I  D  +GN  + MY K 
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
             L  A R F K+  + + +W  MI  Y + G  + +++ F+ M++    P+++++ + +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG-PALIEFYAECGKMSECEKVIHAIGERN 363
            +C   G L+ GK VH  +I  G G E D +    LI+ YA+CG +   ++V      ++
Sbjct: 330 RACGQSGDLQVGKFVHKYLI--GSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            ++WN LI+ Y + G  KE LE   +M      PDS +    LS    +  +  G  IH 
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHC 446

Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            VIK   + E  + +SL+D+Y+KCG  +    +F  +    ++ WN++I       +   
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTV 506

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
              + ++M    L  DE T L  +  CS +    +GK +H  +   G   ++ I  AL +
Sbjct: 507 GFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG L+   +VF  M E++VV+W+A+I  +GM+G+   A   F+ M  SG+ P+ V 
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+  ++ACSHSG V+EG  +F+ M+  + +EP ++HYAC+VDLL+RSG +  A + I SM
Sbjct: 627 FIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSM 686

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   + S+WGALL+ CR     ++ + + K++    ++D GYY L+SNIYA  G WD+  
Sbjct: 687 PMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVK 746

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
            VR+ M+  GLKK PG S I
Sbjct: 747 TVRNSMKTKGLKKEPGSSWI 766


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/749 (32%), Positives = 394/749 (52%), Gaps = 11/749 (1%)

Query: 1   MPLFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C    +L+   ++HAH++ +G   D    T L+  Y + GS+  ++L+FD   E
Sbjct: 34  LSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVE 93

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V+I         +E+   + +M RE    +++ Y S+L A +S G L   ++V
Sbjct: 94  RNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEV 153

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +  G   D  +  +++  Y + G +DDAR VFD M  RD+ SW+ +I     +   
Sbjct: 154 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRG 213

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSL--AEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
            E   +F  M R G  P+  T LS+  A A     +L   + +H H  +     D  +GN
Sbjct: 214 QEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGN 273

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + I MY+KCG +  A   F  +  R   SW AMI    ++G   +A   F+KM +    P
Sbjct: 274 ALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVP 333

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +  T +++L +    G     K VH   +  G+  +   +G A +  Y  CG + + + +
Sbjct: 334 DSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLR-VGSAFVHMYIRCGSIDDAQLI 392

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG-- 413
              +  RN+ +WN +I   A++   +EAL L +QM+  G  PD+ +  + LSA  NVG  
Sbjct: 393 FDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA--NVGEE 450

Query: 414 SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           +L+   ++H + I     D  V ++L+ MY+KCG    A  +F+ + +++V  W  MI G
Sbjct: 451 ALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISG 510

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             Q+G   EA +LF QM    +  D  T+++ + AC++ G LE  K VH   ++ G+  D
Sbjct: 511 LAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD 570

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + +  AL  MYAKCG +  A+RVFD M ER+V SW+ MI     HG+  DA  LF +M  
Sbjct: 571 LRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKL 630

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
            G KPN  +F+ +L ACSH+G V+EG+  F ++ + +G+EP ++HY CMVDLL R+G +E
Sbjct: 631 EGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLE 690

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A   I +MP     + WGALL  C  +  +++ +   KE           Y LLSNIYA
Sbjct: 691 EAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYA 750

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             GNW++   VRS+M+  G++K PG S I
Sbjct: 751 ATGNWEQKLLVRSMMQRRGIRKEPGRSWI 779



 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 205/647 (31%), Positives = 337/647 (52%), Gaps = 18/647 (2%)

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y    + E+++ +Y +M RE    +   Y S+L+AC S   L  G+K+H  II+ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  D  ++T+++  Y + G +DDA+ +FDKM  R+V+SW+ +I          E    F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M REG  P+  T +S+  A     +L   + +H H +   + +D  +GN+ + MY+K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            +  A   F  + +R   SWT MI    + G  Q+A   F++M      PNL T +++L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 306 SCA-----GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + A      L W++E   VH    + G   +   +G ALI  YA+CG + +   V   + 
Sbjct: 241 ASAITSTGALEWVKE---VHKHAGKAGFISDLR-VGNALIHMYAKCGSIDDARLVFDGMC 296

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +R+++SWN +I   A+ G   EA  + ++MQ  G +PDS +  S L+   + G+ +   +
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356

Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H H +++    D  V S+ + MY +CG  + A L+F+++  ++V  WN+MI G  Q   
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKC 416

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ--LEKGKWVHHKLISYGVRKDIYID 537
             EA++LF QM       D  TF+  + A  N+G+  LE  K VH   I  G+  D+ + 
Sbjct: 417 GREALSLFLQMRREGFFPDATTFVNILSA--NVGEEALEWVKEVHSYAIDAGL-VDLRVG 473

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL  MYAKCG+   A++VFD M ERNV +W+ MI     HG  ++A SLF QML  GI 
Sbjct: 474 NALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIV 533

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+  T+++IL AC+ +G++E  K   +     G+  DL+    +V + ++ G ++ A ++
Sbjct: 534 PDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRV 593

Query: 658 IHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEKELSVTGTNDNGY 703
              M    +   W  ++ G   H R +D +    K + + G   NGY
Sbjct: 594 FDDM-LERDVYSWTVMIGGLAQHGRGLDALDLFVK-MKLEGFKPNGY 638


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/661 (34%), Positives = 377/661 (57%), Gaps = 6/661 (0%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           Y  M++       + +PS+L+ACSSL     G  +H RI+  G   D  I +S++  Y +
Sbjct: 57  YASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAK 116

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FG  D ARKVFD M  R+VV W+SII  Y     V E   +F  M R+G++P  VTMLSL
Sbjct: 117 FGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSL 176

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
                EL  ++    +HG  +      D  L NS + MY KC ++  + + F  +++R  
Sbjct: 177 LFGVSELAHVQ---CLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDL 233

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW +++S Y + G+  + L     M     EP+  T  +VL   A  G L+ G+ +H Q
Sbjct: 234 VSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQ 293

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I+R     +  ++  +LI  Y + G +    ++     +++++ W  +IS   + G + +
Sbjct: 294 ILRTCFDLD-AHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADK 352

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
           AL +  QM  +G+   + ++AS ++AC  +GS  LG  +HG++ + +   D   Q+SL+ 
Sbjct: 353 ALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVT 412

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           M++KCG  + + ++F+++ ++++V WN+MI G+ QNG   +A+ LF++M  +    D +T
Sbjct: 413 MHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSIT 472

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            ++ +Q C++ GQL  GKW+H  +I  G+R  I +DT+L DMY KCGDL  AQR F+ M 
Sbjct: 473 IVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMP 532

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
             ++VSWSA+I  YG HG+   A   + + L+SG+KPN V F+++L +CSH+G VE+G  
Sbjct: 533 SHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLN 592

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            + +M R FG+ P+L+H+AC+VDLLSR+G +E A+ +           + G +L+ CR +
Sbjct: 593 IYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRAN 652

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
              ++  TI  ++ +    D G +  L++ YA    W+E G+  + M   GLKK+PG+S 
Sbjct: 653 GNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSF 712

Query: 741 I 741
           I
Sbjct: 713 I 713



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 171/563 (30%), Positives = 297/563 (52%), Gaps = 15/563 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C++L   +    LH  +LV+GL  D   ++ LI  YA+ G    +R VFD   E +
Sbjct: 75  LLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERN 134

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I CY       E+  L+ +M R+    S+    S+L   S L  +   + +HG
Sbjct: 135 VVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHG 191

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             I  GF  D  +  S+L  YG+   ++ +RK+FD M  RD+VSW+S++++Y     + E
Sbjct: 192 SAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICE 251

Query: 180 GLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            L +  +M  +G EPD   F ++LS+A + GE   L+  R +HG +LR    +D  +  S
Sbjct: 252 VLLLLKTMRIQGFEPDPQTFGSVLSVAASRGE---LKLGRCLHGQILRTCFDLDAHVETS 308

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            IVMY K G++  A R F +   +    WTAMIS   ++G   KAL  F +ML+   + +
Sbjct: 309 LIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSS 368

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T+ +V+ +CA LG    G SVH  + R  + P       +L+  +A+CG + +   V 
Sbjct: 369 TATMASVITACAQLGSYNLGTSVHGYMFRHEL-PMDIATQNSLVTMHAKCGHLDQSSIVF 427

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             + +RN++SWN +I+ YA+ G   +AL L  +M++    PDS ++ S L  C + G L 
Sbjct: 428 DKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLH 487

Query: 417 LGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           LG  IH  VI+   +    V +SL+DMY KCG  ++A   F ++    +V W+++I G+ 
Sbjct: 488 LGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYG 547

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDI 534
            +G    A+  + +   + ++ + V FL+ + +CS+ G +E+G  ++  +   +G+  ++
Sbjct: 548 YHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNL 607

Query: 535 YIDTALTDMYAKCGDLQTAQRVF 557
                + D+ ++ G ++ A  ++
Sbjct: 608 EHHACVVDLLSRAGRVEEAYNLY 630



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/528 (29%), Positives = 272/528 (51%), Gaps = 8/528 (1%)

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
            S  + S+++II  +       + L  + SM++  V  D  T  SL +AC  L       
Sbjct: 30  ASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGL 89

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           S+H  +L   + +D  + +S I  Y+K G    A + F  + +R    WT++I CY+R+G
Sbjct: 90  SLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTG 149

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
              +A   F +M     +P+ +T++++L    G+  L   + +H   I  G   + + L 
Sbjct: 150 RVPEAFSLFDEMRRQGIQPSSVTMLSLL---FGVSELAHVQCLHGSAILYGFMSDIN-LS 205

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +++  Y +C  +    K+   + +R+++SWN L+S YA+ G   E L LL  M+  G  
Sbjct: 206 NSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFE 265

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYL 454
           PD  +  S LS   + G L+LG  +HG +++  C   D  V++SLI MY K G  ++A+ 
Sbjct: 266 PDPQTFGSVLSVAASRGELKLGRCLHGQILRT-CFDLDAHVETSLIVMYLKGGNIDIAFR 324

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +FER   K VV+W +MI G  QNG++ +A+ +F QM    ++    T  + I AC+ +G 
Sbjct: 325 MFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGS 384

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
              G  VH  +  + +  DI    +L  M+AKCG L  +  VFD M++RN+VSW+AMI  
Sbjct: 385 YNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITG 444

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           Y  +G +  A  LF +M      P+ +T +++L  C+ +G +  GK+  + +   G+ P 
Sbjct: 445 YAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPC 504

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           +     +VD+  + GD++ A +  + MP   +   W A++ G   H +
Sbjct: 505 ILVDTSLVDMYCKCGDLDIAQRCFNQMP-SHDLVSWSAIIVGYGYHGK 551



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 234/461 (50%), Gaps = 5/461 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L    + L  +  LH   ++ G   D   S  ++  Y +  ++  SR +FD   + D 
Sbjct: 174 LSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDL 233

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  L+  Y    +  E +LL   M  +        + SVL   +S G+L  G  +HG+
Sbjct: 234 VSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQ 293

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I++  FD D  ++TS++  Y + G +D A ++F++   +DVV W+++I+    N    + 
Sbjct: 294 ILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKA 353

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M++ GV+    TM S+  AC +L S     S+HG++ R ++ +D    NS + M
Sbjct: 354 LAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTM 413

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           ++KCG L  +   F K+ KR   SW AMI+ Y ++G+  KAL  F +M    + P+ IT+
Sbjct: 414 HAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITI 473

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L  CA  G L  GK +H  +IR G+ P    +  +L++ Y +CG +   ++  + + 
Sbjct: 474 VSLLQGCASTGQLHLGKWIHSFVIRNGLRPCI-LVDTSLVDMYCKCGDLDIAQRCFNQMP 532

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             +++SW+ +I  Y   G  + AL    +    G+ P+     S LS+C + G ++ GL 
Sbjct: 533 SHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLN 592

Query: 421 IHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
           I+  + +   I    E   + ++D+ S+ G    AY L+++
Sbjct: 593 IYESMTRDFGIAPNLEH-HACVVDLLSRAGRVEEAYNLYKK 632


>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/734 (31%), Positives = 405/734 (55%), Gaps = 4/734 (0%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
            + L + H+ ++ TG   +   +T+L+  YA       S  +F      D F+W  +I+ 
Sbjct: 53  FQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQS 112

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDK 128
           +  N  ++ +   Y +M    +  + F  P V+  C+ L     G  +HG   K G F  
Sbjct: 113 HFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVG 172

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  I +S +  Y + G ++ A  +F ++T +DVV+W+++I  Y  N +   GLK    M 
Sbjct: 173 NSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMH 232

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R G  P++ T+ S  +AC +L +L   + +HG  L+        + ++ + MYS+CG   
Sbjct: 233 RIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPE 292

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A R F K++++   SWT++I+ +++ G   + L  F +M   +  P+ I +  +L    
Sbjct: 293 EAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFG 352

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               + EGK+ H +I+++           AL+  Y + G +    K+ H+   ++   W+
Sbjct: 353 NSDRIFEGKAFHARILKQCCALS-GITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWS 410

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I  Y+  G  ++ +  L +M   G  PD  S+ S +S+C  VG++ +G  IH + IK 
Sbjct: 411 TMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKN 470

Query: 429 DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
              +   V +SL+DMY K G     + +F R  Q+ V+ WN++I  + Q+G   EAI LF
Sbjct: 471 SIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILF 530

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            +M    +  ++VT +  + AC+++  L++G+ +H  +   G   +I I TAL DMYAKC
Sbjct: 531 DKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKC 590

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G+L+T++++F+S  ER+V+ W+ MI  YGMHG +  A  +F+ M +S IKPN  TF+++L
Sbjct: 591 GELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLL 650

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+H+G V EG+  F+ M+ +G+EP L+HYA ++DLL RSG +E A  ++ SMP   +G
Sbjct: 651 SACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDG 710

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           ++WG+LL+ C+IH   +V   + +    +   ++GYY +LS++Y+  G WDE  KVR +M
Sbjct: 711 TVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMM 770

Query: 728 EVTGLKKVPGYSTI 741
           +  G++K  G+S +
Sbjct: 771 KKRGVEKRAGWSAL 784


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/727 (32%), Positives = 398/727 (54%), Gaps = 10/727 (1%)

Query: 25  LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYH 84
           L  D    TR+I  Y+  GS   SR VFD  ++ + F W  +I  Y  N  +   + ++ 
Sbjct: 113 LSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFV 172

Query: 85  KMIREQATI-SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
           KMI E   +  NF +P V++AC+ + ++  G  VHG ++K    +D  +  +++  YG  
Sbjct: 173 KMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTN 232

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE----PDFVTM 199
           G + DA +VF  M  R++VSW+S+I  + DN    E   +   M+ +  E    PD  T+
Sbjct: 233 GSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATL 292

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
            ++   C     +   + +HG  ++  +  +  + N+ + MYSKCG +  A+  F     
Sbjct: 293 ATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNN 352

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGK 317
           +   SW  M+  ++ +G   K  +   +ML    +   + +T++  +  C     L   K
Sbjct: 353 KNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLK 412

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +HC  +++      + +  A +  YA+CG +S   +V  +I  + + SWN LI  Y++ 
Sbjct: 413 ELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQS 472

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQ 436
              + +L+   QM++ GL+PD F+V S LSAC  + SL+LG ++HG +I+    +D FV 
Sbjct: 473 SDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVY 532

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
            SL+ +Y  CG  + A++LF+ ++ K++V WN+M+ G+ QNG    A++LF QM L  ++
Sbjct: 533 ISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQ 592

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
             E++ ++   ACS +  L  G+  H   +   +  + +I  ++ DMYAK G +  + +V
Sbjct: 593 PCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKV 652

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           F+ + ER+V SW+AM+  YG+HG+  +A  LF++M  +G  P+E+TF+ +L AC+HSG V
Sbjct: 653 FNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLV 712

Query: 617 EEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKM-IHSMPFPANGSIWGALL 674
            EG  Y + M+ +FG+ P L+HYAC++D+L R+G ++ A K+    M       IW  LL
Sbjct: 713 HEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLL 772

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           + CRIHK +++ + I  +L V+       Y LLSN+YA  G WDE  KVR  M+   L+K
Sbjct: 773 SSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRK 832

Query: 735 VPGYSTI 741
             G S I
Sbjct: 833 DAGCSWI 839



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 235/483 (48%), Gaps = 12/483 (2%)

Query: 204 EACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
           +A G    ++  R IH  V    ++  D  L    I MYS CG    +   F  + K+  
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148

Query: 263 TSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             W A+IS Y+R+  +   LE FVKM+ E    P+  T   V+ +CAG+  ++ G +VH 
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            +++  +  E  ++  AL+ FY   G +S+  +V   + ERN++SWN +I  ++  G+S+
Sbjct: 209 LVVKTRL-VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSE 267

Query: 382 EALELLVQM----QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQ 436
           E   LL QM          PD  ++A+ L  C     + +G  +HG  +K+   K+  V 
Sbjct: 268 ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVN 327

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-- 494
           ++L+DMYSKCG  N A ++F+    K+VV WN+M+ GF   G+  +  +L  QM      
Sbjct: 328 NALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGD 387

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
           L  DEVT L A+  C     L   K +H + L    V  +  +  A    YAKCG L  A
Sbjct: 388 LRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYA 447

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
            RVF S+  + V SW+A+I  Y        +   + QM  SG+ P+  T  ++L ACS  
Sbjct: 448 HRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQI 507

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            S++ GK     +    +E D   Y  ++ L    G++  A  +  +M      S W  +
Sbjct: 508 KSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVS-WNTM 566

Query: 674 LNG 676
           +NG
Sbjct: 567 VNG 569



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ ++ L     +H  ++   L  D      L+  Y   G L ++ ++FD  ++  
Sbjct: 500 LLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKT 559

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  Y+ N F E ++ L+ +M+            SV  ACS L  L  G + HG
Sbjct: 560 LVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHG 619

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +KC  + +  I  S++  Y + G + ++ KVF+ +  R V SW++++  Y  +    E
Sbjct: 620 YALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKE 679

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            +K+F  M R G  PD +T L +  AC
Sbjct: 680 AIKLFEEMQRTGHCPDELTFLGVLTAC 706



 Score = 39.7 bits (91), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 10/225 (4%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M +F +C+   +LR     H + L   L  +   +  +I+ YA+ GS+  S  VF+  KE
Sbjct: 599 MSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKE 658

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W  ++  Y  +   +E+I L+ +M R         +  VL AC+  G +  G   
Sbjct: 659 RSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTY 718

Query: 118 HGRIIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSRD--VVSWSSIIASYFD 173
             + +K  F  +  ++    ++      G LD+A K+  +  S +  V  W+ +++S   
Sbjct: 719 LDQ-MKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRI 777

Query: 174 NADVSEGLKMFHSM-VREGVEPD-FVTMLSLAEACGELCSLRPAR 216
           + ++  G K+   + V E  +P+ +V + +L    G+   +R  R
Sbjct: 778 HKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVR 822


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/712 (33%), Positives = 394/712 (55%), Gaps = 13/712 (1%)

Query: 38  SYAEMGSLRSSRLVFDTFKEP----DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           SYA +  L SSRL+   F  P     +F+W  L +     +   E++L+Y+ M+R   + 
Sbjct: 15  SYAALSDLASSRLLL--FHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSP 72

Query: 94  SN--FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
            +  F +     A ++      G ++H   ++ G   D     +++  Y   G   DAR+
Sbjct: 73  DDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARR 132

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VFD+M +RDVVSW+S+++S+  N    +  +   SM+R GV  +  +++S+  ACG    
Sbjct: 133 VFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQE 192

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
                 +HG VL+  +     LGN+ + MY K G + ++ + F  + +R   SW + I C
Sbjct: 193 GGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGC 252

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           +  +G +   L  F  M E    P  ITL ++L +   LG+   G+ VH   I++ M  E
Sbjct: 253 FLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAM--E 310

Query: 332 YD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
            D ++  +L++ YA+ G + +   V   I  RN++SWN +I+   + G   EA  L+++M
Sbjct: 311 LDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKM 370

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
           Q  G  P+S ++ + L AC  + SL+ G QIH   I+     D F+ ++LIDMY+KCG  
Sbjct: 371 QKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQL 430

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            LA  +F+ + +K  V +N++I G+ Q+  S E++NLF Q+    +E D ++F+ A+ AC
Sbjct: 431 RLAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTAC 489

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +N+   ++GK +H  L+   +    ++   L  +Y K G L TA ++F+ + E++V SW+
Sbjct: 490 TNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWN 549

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
            MI  YGMHGQ++ A  LF  M D G+  + V+++ +L  CSH G VE GK YF+ M   
Sbjct: 550 NMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ 609

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            +EP   HYACMVDLL RSG +  + ++I  MPF AN  +WGALL  CRIH  I++ +  
Sbjct: 610 NLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYA 669

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              L       +GYY++L N+YAE G W+E  K+R++M+   ++K P YS +
Sbjct: 670 ADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWV 721



 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 175/599 (29%), Positives = 306/599 (51%), Gaps = 8/599 (1%)

Query: 12  KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           K   LHA  L +G   D  A   L+  YA  G    +R VFD     D   W  L+  ++
Sbjct: 94  KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL 153

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            N  F+++      M+R    ++     SV+ AC    + G G  VHG ++K G D    
Sbjct: 154 ANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVN 213

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  +++  YG+FG ++ + KVF+ M  R+ VSW+S I  + +     + L +F  M   G
Sbjct: 214 LGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERG 273

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
             P  +T+ SL  A  EL      R +HG+ ++R +++D  + NS + MY+K G L  A 
Sbjct: 274 FMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKAC 333

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F KIE R   SW AMI+   ++G   +A    +KM +  E PN ITL+ +L +C+ + 
Sbjct: 334 AVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMA 393

Query: 312 WLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
            L+ GK +H   IR G+   +D ++  ALI+ YA+CG++   + +   + E++ +S+N L
Sbjct: 394 SLKTGKQIHAWSIRTGL--MFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTL 450

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI-KID 429
           I  Y++   S E+L L  Q+ + G+  D+ S   +L+AC N+ S + G +IHG ++ ++ 
Sbjct: 451 ILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLL 510

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
               F+ ++L+ +Y+K G  + A  +F RI++K V  WN+MI G+  +G    A +LF  
Sbjct: 511 SNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDL 570

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M  + +  D V+++  +  CS+ G +E+GK     +++  +         + D+  + G 
Sbjct: 571 MKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQ 630

Query: 550 L-QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           L ++ + + D     N   W A++    +HG +  A      + +  +KP    + ++L
Sbjct: 631 LTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFE--LKPEHSGYYSVL 687



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/364 (21%), Positives = 152/364 (41%), Gaps = 37/364 (10%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +L+   ++HA  + TGL +D   S  LI+ YA+ G LR ++ +FD   E D 
Sbjct: 386 LPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDD 444

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +  LI  Y  + +  ES+ L+ ++           +   L AC++L     G+++HG 
Sbjct: 445 VSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGV 504

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++        +  ++L  Y + G LD A K+F+++  +DV SW+++I  Y  +  +   
Sbjct: 505 LVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAA 564

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
             +F  M   GV  D V+ +++   C     +   +    H+L + ++           M
Sbjct: 565 FHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQ--------M 616

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           +  C                       M+    RSG   +++E    +L++    N    
Sbjct: 617 HYAC-----------------------MVDLLGRSGQLTESVE---IILDMPFHANSDVW 650

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +LG+C   G +   +     +    + PE+      L   YAE G+ +E  K+   + 
Sbjct: 651 GALLGACRIHGNIELAQYAADHLFE--LKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMK 708

Query: 361 ERNI 364
            R +
Sbjct: 709 SRKV 712


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/731 (31%), Positives = 390/731 (53%), Gaps = 3/731 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +  +HA  ++ GL         LI+ YA+ G +R +R VF+     D+  W  ++  Y  
Sbjct: 61  VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N   EE++ LY +M R     + ++  S+L AC+       G  +H ++ K GF  +  +
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFV 180

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y        A +VF  M   D V+++++I+ +         L +F  M   G+
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGL 240

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            PD VT+ SL  AC  +  LR  + +H ++L+  + +D  +  S + +Y K GD+  A +
Sbjct: 241 SPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ 300

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F   ++     W  M+  Y +     K+ + F +ML     PN  T   +L +C   G 
Sbjct: 301 IFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGE 360

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  G+ +H   I+ G   +  Y+   LI+ Y++ G + + ++++  I E++++SW  +I+
Sbjct: 361 IGLGEQIHSLTIKNGFQSDM-YVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCK 431
            Y +    KEALE   +MQ  G+ PD+  +AS++SAC  + ++  G QIH  V +     
Sbjct: 420 GYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA 479

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  + + L+ +Y++CG    A+  FE I+ K  + WN +I GF Q+G   EA+ +F +M 
Sbjct: 480 DVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMD 539

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
               + +  TF+++I A +N+  +++GK +H ++I  G   +  I  AL  +Y KCG ++
Sbjct: 540 QAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIE 599

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+  F  M++RN VSW+ +I C   HG+  +A  LF QM   G+KP++VTF+ +L ACS
Sbjct: 600 DAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACS 659

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G VEEG  YF +M    G+ P   HYAC+VD+L R+G ++ A + +  MP PA+  +W
Sbjct: 660 HVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVW 719

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL+ C++HK +++ +   K L     +D+  Y LLSN YA  G W    ++R IM+  
Sbjct: 720 RTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDR 779

Query: 731 GLKKVPGYSTI 741
           G++K PG S I
Sbjct: 780 GVRKEPGRSWI 790



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 162/613 (26%), Positives = 302/613 (49%), Gaps = 14/613 (2%)

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK------VHGRIIKCGFDKDD 130
           E+ + L+    R+   +    +   LRAC      GSG +      +H + I CG     
Sbjct: 23  EKLLPLFAAKCRQYMVLGAVDFACALRACR-----GSGRRWPLVPEIHAKAIICGLSGYR 77

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           +I   ++  Y + G +  AR+VF++++ RD VSW ++++ Y  N    E ++++  M R 
Sbjct: 78  IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           GV P    + S+  AC +    +  R IH  V ++    +  +GN+ I +Y +C     A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
           +R F  +    + ++  +IS + + G   +AL  F +M      P+ +T+ ++L +C+ +
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G LR+GK +H  +++ GM  +Y   G +L++ Y + G + E  ++  +    N++ WN++
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEG-SLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLM 316

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           +  Y +     ++ ++  +M   G+ P+ F+    L  C + G + LG QIH   IK   
Sbjct: 317 LVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGF 376

Query: 431 K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           + D +V   LIDMYSK G+ + A  + + I++K VV W SMI G+ Q+    EA+  F +
Sbjct: 377 QSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKE 436

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    +  D +   +AI AC+ I  + +G  +H ++   G   D+ I   L  +YA+CG 
Sbjct: 437 MQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGI 496

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
            + A   F+++  +  ++W+ +I  +   G   +A  +F +M  +G K N  TF++ + A
Sbjct: 497 SKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISA 556

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
            ++   +++GK     +   G   + +    ++ L  + G IE A KM        N   
Sbjct: 557 SANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDA-KMDFFEMTKRNEVS 615

Query: 670 WGALLNGCRIHKR 682
           W  ++  C  H R
Sbjct: 616 WNTIITCCSQHGR 628



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 225/420 (53%), Gaps = 4/420 (0%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+   +LRK  +LH++LL  G+  D      L++ Y + G +  +  +FD+    +
Sbjct: 250 LLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTN 309

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             +W +++  Y   +   +S  ++++M+      + F YP +LR C+  G++G GE++H 
Sbjct: 310 VVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHS 369

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK GF  D  +   ++  Y ++G LD A+++ D +  +DVVSW+S+IA Y  +    E
Sbjct: 370 LTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKE 429

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+ F  M   G+ PD + + S   AC  + ++     IH  V       D  + N  + 
Sbjct: 430 ALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVY 489

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y++CG    A  +F  IE +   +W  +IS + +SG +++AL+ F+KM +   + N+ T
Sbjct: 490 LYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFT 549

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++ + + A L  +++GK +H ++I+ G   E + +  ALI  Y +CG + + +     +
Sbjct: 550 FVSSISASANLADIKQGKQIHARVIKTGYTSETE-ISNALISLYGKCGSIEDAKMDFFEM 608

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +RN +SWN +I+  ++ G   EAL+L  QM+  GL P   +    L+AC +VG ++ GL
Sbjct: 609 TKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGL 668



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 9/165 (5%)

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW- 520
           +    +N  + GF    +  + + LF       + +  V F  A++AC   G+    +W 
Sbjct: 4   RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGR----RWP 59

Query: 521 ----VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
               +H K I  G+     I   L D+YAK G ++ A+RVF+ +S R+ VSW A++  Y 
Sbjct: 60  LVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYA 119

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
            +G   +A  L+++M  SG+ P      +IL AC+ +   + G+ 
Sbjct: 120 QNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRL 164


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/743 (31%), Positives = 394/743 (53%), Gaps = 32/743 (4%)

Query: 3   LFRSCT--NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           L + CT  +LR   ++HAH+  +GL  DP     LI  Y++      +R + D   EPD 
Sbjct: 63  LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDL 122

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W+ LI  Y  N     +++ +H+M       + F + SVL+ACS + DL  G++VHG 
Sbjct: 123 VSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGV 182

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++  GF+ D  +  +++  Y +     D++++FD++  R+VVSW+++ + Y       E 
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEA 242

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F+ MV  G++P+  ++ S+  AC  L      + IHG++++     D    N+ + M
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDM 302

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+K GDL  A   F KI++    SW A+I+        ++ALE   +M            
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM------------ 350

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
                           + +H  +++  M  +  ++   L++ Y++C  + +     + + 
Sbjct: 351 ---------------KRQLHSSLMKMDMESDL-FVSVGLVDMYSKCDLLEDARMAFNLLP 394

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E+++++WN +IS Y++     EAL L V+M   G+  +  ++++ L +   +  + +  Q
Sbjct: 395 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 454

Query: 421 IHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +HG  +K     D +V +SLID Y KC     A  +FE      +V + SMI  + Q G 
Sbjct: 455 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 514

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             EA+ LF +M    L+ D     + + AC+N+   E+GK +H  ++ YG   DI+   +
Sbjct: 515 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS 574

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L +MYAKCG +  A R F  ++ER +VSWSAMI     HG    A  LF QML  G+ PN
Sbjct: 575 LVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPN 634

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            +T +++L AC+H+G V E K YF +M  +FG +P  +HYACM+DLL R+G I  A +++
Sbjct: 635 HITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELV 694

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
           + MPF AN S+WGALL   RIHK +++ +   + L +     +G + LL+NIYA  G W+
Sbjct: 695 NKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWE 754

Query: 719 EFGKVRSIMEVTGLKKVPGYSTI 741
              +VR +M  + +KK PG S I
Sbjct: 755 NVAEVRRLMRDSKVKKEPGMSWI 777



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/591 (28%), Positives = 302/591 (51%), Gaps = 32/591 (5%)

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           T ++  Y  +L  C +   L  G ++H  I K G   D  I+  ++  Y +      ARK
Sbjct: 53  TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           + D+ +  D+VSWS++I+ Y  N      L  FH M   GV+ +  T  S+ +AC  +  
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           LR  + +HG V+    + D  + N+ +VMY+KC + L ++R F +I +R   SW A+ SC
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y +  +  +A+  F +M+    +PN  +L +++ +C GL     GK +H  +I+  +G +
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK--LGYD 290

Query: 332 YD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +D +   AL++ YA+ G +++   V   I + +I+SWN +I+        ++ALELL QM
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
           +                            Q+H  ++K+D + D FV   L+DMYSKC   
Sbjct: 351 KR---------------------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A + F  + +K ++ WN++I G+ Q    +EA++LF +M+   +  ++ T  T +++ 
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           + +  +   + VH   +  G   DIY+  +L D Y KC  ++ A+R+F+  +  ++VS++
Sbjct: 444 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 503

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           +MI  Y  +GQ  +A  LF +M D  +KP+     ++L AC++  + E+GK     +  +
Sbjct: 504 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 563

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           G   D+     +V++ ++ G I+ A +    +      S W A++ G   H
Sbjct: 564 GFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGGLAQH 613



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 156/287 (54%), Gaps = 2/287 (0%)

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLL 455
           P S S +  LS C    SL+ GLQIH H+ K    D+  +++ LI++YSKC     A  L
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
            +   +  +V W+++I G+ QNG    A+  FH+M+L  ++ +E TF + ++ACS +  L
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             GK VH  ++  G   D+++   L  MYAKC +   ++R+FD + ERNVVSW+A+  CY
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
                  +A  LF +M+ SGIKPNE +  +++ AC+       GK     +   G + D 
Sbjct: 234 VQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDP 293

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
                +VD+ ++ GD+  A  +   +  P   S W A++ GC +H+ 
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVS-WNAVIAGCVLHEH 339


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/657 (35%), Positives = 369/657 (56%), Gaps = 6/657 (0%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+R    + +  +P VL+ CS   D+  G +VHG + K GFD D  +  ++L  YG  G 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REGVEPDFVTMLSLAE 204
           L+DAR++FD+M  RDVVSW++II     N D +E    +  M+ R  ++P+ V+++SL  
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
               L      R IH + ++  +       N+ +  Y KCG + +  + F +  ++   S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W ++I+     G    AL +F  M++   +PN +T+ ++L     L   + GK +H   +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240

Query: 325 RKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           R  MG E D ++  +LI+ YA+ G  +E   + H +  RNI+SWN +I+ YA   +  EA
Sbjct: 241 R--MGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDM 442
           +  ++QMQ  G  P++ +  + L AC  +G L  G +IH   ++I    D FV +SLIDM
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 358

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y+KCG  + A  +F    +K  V +N +I G+ +  + L+++NLF +M L   + D V+F
Sbjct: 359 YAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           +  I AC+N+  L++GK VH   +   +   +++  +L D Y KCG +  A R+F+ +  
Sbjct: 418 VGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILF 477

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           ++V SW+ MI  YGM G+L  A S+F+ M D  ++ + V+++ +L ACSH G VE G  Y
Sbjct: 478 KDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQY 537

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           F+ M    +EP   HY CMVDLL R+G +E A K+I  +P   + +IWGALL  CRI+  
Sbjct: 538 FSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGN 597

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +++ +   + L        GYY LLSNIYAE G WDE  K+R +M+  G KK PG S
Sbjct: 598 VELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCS 654



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 232/481 (48%), Gaps = 6/481 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+  +  +     R+H + +  GL         L+++Y + GS+++   VF+   E + 
Sbjct: 119 LPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I          +++  +  MI   A  ++    S+L     L    +G+++HG 
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ G + D  I  S++  Y + G   +A  +F  +  R++VSW+++IA+Y  N    E 
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++    M   G  P+ VT  ++  AC  L  L P + IH   +R  +  D  + NS I M
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 358

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L SA   F    ++   S+  +I  Y+ +    ++L  F +M  + ++P++++ 
Sbjct: 359 YAKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + V+ +CA L  L++GK VH   +R  +   + ++  +L++FY +CG++    ++ + I 
Sbjct: 418 VGVISACANLAALKQGKEVHGVALRNHL-YSHLFVSNSLLDFYTKCGRIDIACRLFNQIL 476

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +++ SWN +I  Y   G  + A+ +   M+   +  D  S  + LSAC + G ++ G Q
Sbjct: 477 FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQ 536

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQ 476
               ++    +  E   + ++D+  + GF   A  L +++       +W +++  C  Y 
Sbjct: 537 YFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYG 596

Query: 477 N 477
           N
Sbjct: 597 N 597


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/734 (32%), Positives = 402/734 (54%), Gaps = 27/734 (3%)

Query: 19  HLLVTG---LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           H LV+G   L  D    TR+I  YA  GS   SR  FD  +  + F W  +I  Y  N  
Sbjct: 107 HHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNEL 166

Query: 76  FEESILLYHKMIREQATI-SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           + E + ++ KMI +   +  NF +P V++AC+ + D+G G  VHG ++K G  +D  +  
Sbjct: 167 YHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGN 226

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  YG  G + DA K+FD M  R++VSW+S+I  + DN D  +G  M          P
Sbjct: 227 ALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD--DGAFM----------P 274

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T++++   C     +   + +HG  ++  +  +  + N+ + MYSK G ++ ++  F
Sbjct: 275 DVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIF 334

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE--PNLITLITVLGSCAGLGW 312
                +   SW  M+  ++  G      +   +ML   E+   + +T++  +  C     
Sbjct: 335 KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESV 394

Query: 313 LREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L   K +HC  +++    E+ Y   L  A +  YA+CG +S  ++V H I  + + SWN 
Sbjct: 395 LPSLKELHCYSLKQ----EFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNA 450

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           LI  YA+    + +L+  +QM+  GL+PD+F+V S LSAC  + SL+LG ++HG +I+  
Sbjct: 451 LIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 510

Query: 430 C-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             +D FV  S++ +Y  CG      +LF+ ++  S+V WN++I G  QNG    A+ LF 
Sbjct: 511 LERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFR 570

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           QM L  ++   ++ +T   ACS +  L  G+  H   + + +  + +I  ++ DMYAK G
Sbjct: 571 QMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNG 630

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  + +VF+ + E++  SW+AMI  YGMHG+  +A  LF++M  +G  P+++TF+ +L 
Sbjct: 631 AITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLT 690

Query: 609 ACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           AC+HSG + EG  Y + M+  FG++P+L+HYAC++D+L R+G ++ A ++   M    + 
Sbjct: 691 ACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDV 750

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            IW +LL+ CRIH+ +++ + +  +L V        Y LLSN+YA  G WD+  +VR  M
Sbjct: 751 GIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRM 810

Query: 728 EVTGLKKVPGYSTI 741
           +   L+K  G S I
Sbjct: 811 KEMSLRKDAGCSWI 824



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 169/604 (27%), Positives = 312/604 (51%), Gaps = 27/604 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++ TGL  D      L+  Y   G +  +  +FD   E +   W  +I+ +  N  
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG- 267

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            ++   +      + AT+      +VL  C+   ++G G+ VHG  +K   DK+ V+  +
Sbjct: 268 -DDGAFM-----PDVATVV-----TVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV--REGVE 193
           ++  Y ++GC+ D++ +F    +++VVSW++++  +    D+     +   M+   E V+
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVK 376

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D VT+L+    C +   L   + +H + L+++   D  L N+F+  Y+KCG L  A+R 
Sbjct: 377 ADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRV 436

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I  +   SW A+I  Y +S   + +L++ ++M      P+  T+ ++L +C+ L  L
Sbjct: 437 FHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSL 496

Query: 314 REGKSVHCQIIRKGMGPE-YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           R GK VH  IIR  +  + + YL  +++  Y  CG++   + +  A+ + +++SWN +I+
Sbjct: 497 RLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVIT 554

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            + + G  + AL L  QM  +G+ P   S+ +   AC  + SL+LG + H + +K   +D
Sbjct: 555 GHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLED 614

Query: 433 E-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
             F+  S+IDMY+K G    +  +F  +++KS   WN+MI G+  +G + EAI LF +M 
Sbjct: 615 NAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQ 674

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
                 D++TFL  + AC++ G L +G +++     S+G++ ++     + DM  + G L
Sbjct: 675 RTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL 734

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQL----NDAASLFKQMLDSGIKPNEVTFMN 605
             A RV   MSE  +V  W++++    +H  L      AA LF  +L+   KP     ++
Sbjct: 735 DNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLF--VLEPE-KPENYVLLS 791

Query: 606 ILWA 609
            L+A
Sbjct: 792 NLYA 795



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 173/365 (47%), Gaps = 3/365 (0%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L  L  LH + L     YD   +   + SYA+ GSL  ++ VF   +      W  LI  
Sbjct: 395 LPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGG 454

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y  ++    S+  + +M        NF   S+L ACS L  L  G++VHG II+   ++D
Sbjct: 455 YAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 514

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +  S+L  Y   G L   + +FD M    +VSW+++I  +  N      L +F  MV 
Sbjct: 515 LFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVL 574

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            G++P  ++M+++  AC  L SLR  R  H + L+  ++ +  +  S I MY+K G +  
Sbjct: 575 YGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQ 634

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           + + F  ++++   SW AMI  Y   G  ++A++ F +M      P+ +T + VL +C  
Sbjct: 635 SSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNH 694

Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSW 367
            G L EG     Q+    G+ P   +    +I+     G++    +V   + E  ++  W
Sbjct: 695 SGLLHEGLRYLDQMKSSFGLKPNLKHYA-CVIDMLGRAGQLDNALRVAAEMSEEPDVGIW 753

Query: 368 NMLIS 372
           N L+S
Sbjct: 754 NSLLS 758



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 99/455 (21%), Positives = 181/455 (39%), Gaps = 60/455 (13%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ L+ L     +H  ++   L  D      ++  Y   G L + +++FD  ++  
Sbjct: 486 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNS 545

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  ++ N F E ++ L+ +M+            +V  ACS L  L  G + H 
Sbjct: 546 LVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHA 605

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K   + +  I  SI+  Y + G +  + KVF+ +  +   SW+++I  Y  +    E
Sbjct: 606 YALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKE 665

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +K+F  M R G  PD +T L +  AC            H  +L   ++    + +SF +
Sbjct: 666 AIKLFEEMQRTGRNPDDLTFLGVLTACN-----------HSGLLHEGLRYLDQMKSSFGL 714

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                              K     +  +I    R+G    AL    +M    EEP++  
Sbjct: 715 -------------------KPNLKHYACVIDMLGRAGQLDNALRVAAEM---SEEPDVGI 752

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++L  C     L  G+ V  ++    + PE       L   YA  GK  +  +V   +
Sbjct: 753 WNSLLSWCRIHQNLEMGEKVAAKLFV--LEPEKPENYVLLSNLYAGLGKWDDVRQVRQRM 810

Query: 360 GERNI-----LSW--------NMLISEYARKGMSK-EALELLVQMQTW--GLMPDSFSVA 403
            E ++      SW        + ++ E    G  + ++L  +++M+ W  G  PD+ SV 
Sbjct: 811 KEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQ 870

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS 438
             LS    +       Q+ GH  K+      +++S
Sbjct: 871 HDLSEEEKIE------QLRGHSEKLAITYGLIKTS 899



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 12/259 (4%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M +F +C+   +LR     HA+ L   L  +   +  +I+ YA+ G++  S  VF+  KE
Sbjct: 585 MTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKE 644

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             +  W  +I  Y  +   +E+I L+ +M R      +  +  VL AC+  G L  G + 
Sbjct: 645 KSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRY 704

Query: 118 HGRIIKC-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNA 175
             ++    G   +      ++   G  G LD+A +V  +M+   DV  W+S+++    + 
Sbjct: 705 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQ 764

Query: 176 DVSEGLKMFHSM-VREGVEPD-FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           ++  G K+   + V E  +P+ +V + +L    G+   +R  R     +  RK       
Sbjct: 765 NLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRK-----DA 819

Query: 234 GNSFIVMYSKCGDLLSAER 252
           G S+I +  K    +  ER
Sbjct: 820 GCSWIELNGKVFSFVVGER 838


>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/728 (31%), Positives = 402/728 (55%), Gaps = 4/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H+ ++ TG   +   +T+L+  YA       S  +F      D F+W  +I+ +  N  
Sbjct: 29  FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 88

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQT 134
           ++ +   Y +M    +  + F  P V+  C+ L     G  +HG   K G F  +  I +
Sbjct: 89  YQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGS 148

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S +  Y + G ++ A  +F ++T +DVV+W+++I  Y  N +   GLK    M R G  P
Sbjct: 149 SFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTP 208

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           ++ T+ S  +AC +L +L   + +HG  L+        + ++ + MYS+CG    A R F
Sbjct: 209 NYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCF 268

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            K++++   SWT++I+ +++ G   + L  F +M   +  P+ I +  +L        + 
Sbjct: 269 CKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIF 328

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           EGK+ H +I+++           AL+  Y + G +    K+ H+   ++   W+ +I  Y
Sbjct: 329 EGKAFHARILKQCCALS-GITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGY 386

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
           +  G  ++ +  L +M   G  PD  S+ S +S+C  VG++ +G  IH + IK    +  
Sbjct: 387 SNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENV 446

Query: 435 -VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V +SL+DMY K G     + +F R  Q+ V+ WN++I  + Q+G   EAI LF +M   
Sbjct: 447 SVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKE 506

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +  ++VT +  + AC+++  L++G+ +H  +   G   +I I TAL DMYAKCG+L+T+
Sbjct: 507 KVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETS 566

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           +++F+S  ER+V+ W+ MI  YGMHG +  A  +F+ M +S IKPN  TF+++L AC+H+
Sbjct: 567 RKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHT 626

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
           G V EG+  F+ M+ +G+EP L+HYA ++DLL RSG +E A  ++ SMP   +G++WG+L
Sbjct: 627 GHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSL 686

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ C+IH   +V   + +    +   ++GYY +LS++Y+  G WDE  KVR +M+  G++
Sbjct: 687 LSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVE 746

Query: 734 KVPGYSTI 741
           K  G+S +
Sbjct: 747 KRAGWSAL 754



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 248/578 (42%), Gaps = 50/578 (8%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           F++C +L  L     LH   L  G        + ++  Y+  GS   +   F    + D 
Sbjct: 217 FQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDL 276

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  +       E + L+ +M   +      +   +L    +   +  G+  H R
Sbjct: 277 ISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHAR 336

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K       +   ++L  Y +FG L  A K+F     +    WS++I  Y +     + 
Sbjct: 337 ILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKC 395

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +     M+  G EPD  +++S+  +C ++ ++   RSIH + ++  I  +  + NS + M
Sbjct: 396 ISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDM 455

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y K G + +  R F +  +R   SW  +IS Y +SG   +A+  F KM++ K  PN +T 
Sbjct: 456 YGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTC 515

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           I VL +CA L  L EG+ +H  I   G       +  ALI+ YA+CG++    K+ ++  
Sbjct: 516 IIVLSACAHLASLDEGEKIHQYIKENGFESNIT-IRTALIDMYAKCGELETSRKLFNSTE 574

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           ER+++ WN++IS Y   G  + A+E+   M+   + P++ +  S LSAC + G +  G  
Sbjct: 575 ERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRH 634

Query: 421 IHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +   + K   +      +S+ID+  + G                                
Sbjct: 635 LFDRMQKYGIEPSLKHYASIIDLLGRSG-------------------------------- 662

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID-- 537
           SLEA      +    +  D   + + + AC    + E G     +L  Y +  D   D  
Sbjct: 663 SLEAAEAL--VLSMPITPDGTVWGSLLSACKIHNEFEVGV----RLARYAIESDPKNDGY 716

Query: 538 -TALTDMYAKCGDLQTAQRVFDSMSERNV---VSWSAM 571
              L+D+Y+  G     ++V D M +R V     WSA+
Sbjct: 717 YIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWSAL 754



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 14/164 (8%)

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
           W H  +I+ G   +++  T L   YA       +  +F  +  +++  W+++I  +  +G
Sbjct: 28  WFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 87

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY- 638
               A   + QM  S   PN+ T   ++  C+      E   + + M I G+   L  + 
Sbjct: 88  DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCA------ELMMFNHGMNIHGLTSKLGLFV 141

Query: 639 ------ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                 +  + + S+ G +E A  M   +    +   W AL+ G
Sbjct: 142 GNSAIGSSFIYMYSKCGHVESASIMFSEITVK-DVVTWTALIVG 184


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/750 (32%), Positives = 392/750 (52%), Gaps = 13/750 (1%)

Query: 1   MPLFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C    NL+   ++HAH++ +G   D    T L+  Y + GS+  ++L+FD   E
Sbjct: 223 LSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVE 282

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V+I         +E+  L+ +M RE    +++ Y S+L A +S G L   ++V
Sbjct: 283 RNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEV 342

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +  G   D  +  +++  Y + G +DDAR VFD MT RD+ SW+ +I     +   
Sbjct: 343 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRG 402

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSL--AEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
            E   +F  M R G  P+  T LS+  A A     +L   + +H H        D  +GN
Sbjct: 403 QEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGN 462

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE---VK 292
           + I MY+KCG +  A   F  +  R   SW AM+    ++G   +A   F++M +   V 
Sbjct: 463 ALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVP 522

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
           +    ++L+   GS   L W+ E   VH   +  G+  ++  +G A I  Y  CG + + 
Sbjct: 523 DSTTYLSLLNTHGSTDALEWVNE---VHKHAVETGLISDF-RVGSAFIHMYIRCGSIDDA 578

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             +   +  R++ +WN +I   A++   +EAL L +QMQ  G +PD+ +  + LSA  + 
Sbjct: 579 RLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDE 638

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            +L+   ++H H       D  V ++L+  YSKCG    A  +F+ + +++V  W  MI 
Sbjct: 639 EALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIG 698

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G  Q+G   +A + F QM    +  D  T+++ + AC++ G LE  K VH+  +S G+  
Sbjct: 699 GLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVS 758

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+ +  AL  MYAKCG +  A+ VFD M ER+V SW+ MI     HG+  +A   F +M 
Sbjct: 759 DLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMK 818

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
             G KPN  +++ +L ACSH+G V+EG+  F +M + +G+EP ++HY CMVDLL R+G +
Sbjct: 819 SEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLL 878

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           E A   I +MP   + + WGALL  C  +  +++ +   KE           Y LLSNIY
Sbjct: 879 EEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIY 938

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A  G W++   VRS+M+  G++K PG S I
Sbjct: 939 AATGKWEQKLLVRSMMQRKGIRKEPGRSWI 968



 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 215/699 (30%), Positives = 357/699 (51%), Gaps = 20/699 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ +G+  +   + +L+  Y   G L+ +R VFD   + + ++W  +I  Y    
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E+++ +Y KM +E    +   Y S+L+AC    +L  G+K+H  II+ GF  D  ++T
Sbjct: 199 HAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVET 258

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G ++DA+ +FDKM  R+V+SW+ +I          E   +F  M REG  P
Sbjct: 259 ALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIP 318

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T +S+  A     +L   + +H H +   + +D  +GN+ + MY+K G +  A   F
Sbjct: 319 NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVF 378

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL-----GSCAG 309
             + +R   SWT MI    + G  Q+A   F++M      PNL T +++L      S + 
Sbjct: 379 DGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSA 438

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L W+   K VH      G   +   +G ALI  YA+CG + +   V   + +R+++SWN 
Sbjct: 439 LEWV---KVVHKHAEEAGFISDL-RIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNA 494

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           ++   A+ G   EA  + +QMQ  GL+PDS +  S L+  G+  +L+   ++H H ++  
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG 554

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              +F V S+ I MY +CG  + A LLF+++  + V  WN+MI G  Q     EA++LF 
Sbjct: 555 LISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFL 614

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           QM       D  TF+  + A  +   LE  K VH      G+  D+ +  AL   Y+KCG
Sbjct: 615 QMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCG 673

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           +++ A++VFD M ERNV +W+ MI     HG  +DA S F QML  GI P+  T+++IL 
Sbjct: 674 NVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILS 733

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           AC+ +G++E  K   N     G+  DL+    +V + ++ G I+ A  +   M    +  
Sbjct: 734 ACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVF 792

Query: 669 IWGALLNGCRIHKR----IDVMKTIEKELSVTGTNDNGY 703
            W  ++ G   H R    +D    ++ E    G   NGY
Sbjct: 793 SWTVMIGGLAQHGRGLEALDFFVKMKSE----GFKPNGY 827



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/607 (28%), Positives = 306/607 (50%), Gaps = 6/607 (0%)

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
           ++++ +    +++   I +F Y ++L+ C    D+   ++VH  IIK G +++  +   +
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           L  Y   G L  AR+VFDK+  +++  W+++I  Y +     + ++++  M +E  +P+ 
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           +T LS+ +AC    +L+  + IH H+++   + D  +  + + MY KCG +  A+  F K
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           + +R   SWT MI      G  Q+A   F++M      PN  T +++L + A  G L   
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K VH   +  G+  +   +G AL+  YA+ G + +   V   + ER+I SW ++I   A+
Sbjct: 340 KEVHSHAVNAGLALDL-RVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ 398

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSL--SACGNVGSLQLGLQIHGHVIKID-CKDE 433
            G  +EA  L +QMQ  G +P+  +  S L  SA  +  +L+    +H H  +     D 
Sbjct: 399 HGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDL 458

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            + ++LI MY+KCG  + A L+F+ +  + V+ WN+M+ G  QNG   EA  +F QM   
Sbjct: 459 RIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQE 518

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            L  D  T+L+ +    +   LE    VH   +  G+  D  + +A   MY +CG +  A
Sbjct: 519 GLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDA 578

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           + +FD +S R+V +W+AMI          +A SLF QM   G  P+  TF+NIL A    
Sbjct: 579 RLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDE 638

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            ++E  K   +     G+  DL+    +V   S+ G+++ A ++   M    N + W  +
Sbjct: 639 EALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMM 696

Query: 674 LNGCRIH 680
           + G   H
Sbjct: 697 IGGLAQH 703



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 168/304 (55%), Gaps = 2/304 (0%)

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSS 438
           +K+A+ +L      G+  DSFS  + L  C     + L  Q+H  +IK   +   +V + 
Sbjct: 99  AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANK 158

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+ +Y +CG    A  +F+++ +K++ +W +MI G+ + G++ +A+ ++ +M   C + +
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           E+T+L+ ++AC     L+ GK +H  +I  G + D+ ++TAL +MY KCG ++ AQ +FD
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFD 278

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M ERNV+SW+ MI     +G+  +A  LF QM   G  PN  T+++IL A + +G++E 
Sbjct: 279 KMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEW 338

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
            K   +     G+  DL+    +V + ++SG I+ A  +   M      S W  ++ G  
Sbjct: 339 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFS-WTVMIGGLA 397

Query: 679 IHKR 682
            H R
Sbjct: 398 QHGR 401


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/709 (32%), Positives = 377/709 (53%), Gaps = 3/709 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++ +Y+  G + ++  +FD   +PD   W  L+  Y     F+ES+ L+ +M R   +  
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              +  +L++CS+L +L  G +VH   +K G + D    ++++  YG+   LDDA   F 
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  R+ VSW + IA    N     GL++F  M R G+     +  S   +C  +  L  
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R +H H ++ K   D  +G + + +Y+K   L  A R F  +      +  AM+    R
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G   +A+  F  M+      ++++L  V  +CA      +G+ VHC  I+ G   +   
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI-C 387

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  A+++ Y +C  + E   +   + +++ +SWN +I+   + G   + +    +M  +G
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG 447

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAY 453
           + PD F+  S L AC  + SL+ GL +H  VIK     D FV S+++DMY KCG  + A 
Sbjct: 448 MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ 507

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            L +RI  + VV WN+++ GF  N  S EA   F +M    L+ D  TF T +  C+N+ 
Sbjct: 508 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 567

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            +E GK +H ++I   +  D YI + L DMYAKCGD+  +  VF+ + +R+ VSW+AMI 
Sbjct: 568 TIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 627

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            Y +HG   +A  +F++M    + PN  TF+ +L ACSH G  ++G  YF+ M   + +E
Sbjct: 628 GYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLE 687

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P L+H+ACMVD+L RS   + A K I+SMPF A+  IW  LL+ C+I + +++ +     
Sbjct: 688 PQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASN 747

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +   +D+  Y LLSN+YAE G W +  + R +++   LKK PG S I
Sbjct: 748 VLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 301/576 (52%), Gaps = 7/576 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L +SC+ L +L+   ++HA  + TGL  D    + L++ Y +  SL  +   F    E +
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W   I   + N  +   + L+ +M R    +S   Y S  R+C+++  L +G ++H 
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK  F  D V+ T+I+  Y +   L DAR+ F  + +  V + ++++          E
Sbjct: 275 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 334

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  M+R  +  D V++  +  AC E       + +H   ++    +D  + N+ + 
Sbjct: 335 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC  L+ A   F  ++++ + SW A+I+   ++G +   +  F +ML    +P+  T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CA L  L  G  VH ++I+ G+G +  ++   +++ Y +CG + E +K+   I
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDA-FVASTVVDMYCKCGIIDEAQKLHDRI 513

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G + ++SWN ++S ++    S+EA +   +M   GL PD F+ A+ L  C N+ +++LG 
Sbjct: 514 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG +IK +   DE++ S+L+DMY+KCG    + L+FE+++++  V WN+MICG+  +G
Sbjct: 574 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
             +EA+ +F +M    +  +  TF+  ++ACS++G  + G ++ H     Y +   +   
Sbjct: 634 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 693

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
             + D+  +    Q A +  +SM  + + V W  ++
Sbjct: 694 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 729



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 306/634 (48%), Gaps = 33/634 (5%)

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D V   ++L  Y   G +  A  +FD M   DVVSW+++++ Y       E + +F  M
Sbjct: 81  RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            R GV PD  T   L ++C  L  L     +H   ++  ++ID   G++ + MY KC  L
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A   F  + +R   SW A I+   ++  + + LE F++M  +    +  +  +   SC
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A +  L  G+ +H   I+     +   +G A+++ YA+   +++  +    +    + + 
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDR-VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++    R G+  EA+ L   M    +  D  S++   SAC        G Q+H   IK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D  V ++++D+Y KC     AYL+F+ ++QK  V WN++I    QNG+  + I  
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F++M    ++ D+ T+ + ++AC+ +  LE G  VH K+I  G+  D ++ + + DMY K
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 499

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG +  AQ++ D +  + VVSW+A++  + ++ +  +A   F +MLD G+KP+  TF  +
Sbjct: 500 CGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATV 559

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKMIHSMPF 663
           L  C++  ++E GK     +    +  D    + +VD+ ++ GD+  +   F+ +    F
Sbjct: 560 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDF 619

Query: 664 PANGSIWGALLNGCRIH----KRIDVMKTIEKELSV---------------TGTNDNG-- 702
            +    W A++ G  +H    + + + + ++KE  V                G  D+G  
Sbjct: 620 VS----WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR 675

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           Y+ L++  Y  E   + F     ++++ G  K P
Sbjct: 676 YFHLMTTHYKLEPQLEHFA---CMVDILGRSKGP 706



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 196/375 (52%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLR---KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F +C   +   +  ++H   + +G   D   +  +++ Y +  +L  + L+F   K+ D
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I     N  ++++IL +++M+R      +F Y SVL+AC++L  L  G  VH 
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 476

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           ++IK G   D  + ++++  Y + G +D+A+K+ D++  + VVSW++I++ +  N +  E
Sbjct: 477 KVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEE 536

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             K F  M+  G++PD  T  ++ + C  L ++   + IHG ++++++  D  + ++ + 
Sbjct: 537 AQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVD 596

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCGD+  +   F K+EKR   SW AMI  Y   G   +AL  F +M +    PN  T
Sbjct: 597 MYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHAT 656

Query: 300 LITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + VL +C+ +G   +G +  H       + P+ ++    +++         E  K I++
Sbjct: 657 FVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA-CMVDILGRSKGPQEAVKFINS 715

Query: 359 IG-ERNILSWNMLIS 372
           +  + + + W  L+S
Sbjct: 716 MPFQADAVIWKTLLS 730



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           R+D      +   Y+  GD+ TA  +FD M + +VVSW+A++  Y   G   ++  LF +
Sbjct: 80  RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVE 139

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M   G+ P+  TF  +L +CS    +  G          G+E D++  + +VD+  +   
Sbjct: 140 MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 199

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGC 677
           ++ A    + MP   N   WGA + GC
Sbjct: 200 LDDALCFFYGMP-ERNWVSWGAAIAGC 225


>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
 gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
          Length = 804

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/745 (32%), Positives = 407/745 (54%), Gaps = 8/745 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF+ C ++R L ++HA++   GL +D    ++++  YA +G+L  SRLVF      D  +
Sbjct: 54  LFQGCADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISL 113

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W   +  Y    + EE I+LY ++   Q   +      V+++C+ L +L  G+ VH   +
Sbjct: 114 WNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSL 173

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD--VSEG 180
           K     +  + +S++  Y +F   +D+R VF+++ ++D+V+++S+I  Y +  D      
Sbjct: 174 KLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNA 233

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIV 239
            ++   M++  +E + VT++SL +  G L +L+  +S+H + +RR I + D  L  S + 
Sbjct: 234 FEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVN 293

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
            Y++CG   SA  T ++  K    SW A++S  NR+G    A++    ML E K  P+ +
Sbjct: 294 FYTRCGAYQSAA-TVLQNSKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSV 352

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T   VL +CA L +     S+H   IR+ + P    L  ALIE Y +C ++   + +   
Sbjct: 353 TFANVLSACAELCYFCFAASIHAYFIRRFI-PMDVVLTTALIEVYTKCTRVMRSKYLFDQ 411

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++++S+N +I  Y +  M+ EA  LL  M   G+ PD  +V S L+A  +   L  G
Sbjct: 412 LIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRG 471

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             IHG  I+   C D  V++ ++ MYS CG    A  +F+ +++K++V W +M+ G   N
Sbjct: 472 RWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSN 531

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G++ E + LF  M     + D V+ +TA+QA S++G L   K +H  +    + KD    
Sbjct: 532 GHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITA 591

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L   YAKCG L  +  +F S+  RN+ +W+AMI  Y MHG   +   +FKQM +  I+
Sbjct: 592 NSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQ 651

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           P+E+TF  +L ACSH+G V++G   FN+M  ++ V P  +HY CMVDLL R+G +E  +K
Sbjct: 652 PDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYK 711

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
            I         +I+ ALL+ CR H    +   I KEL   G  + G Y L+S +YA+EG 
Sbjct: 712 FIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQNPGIYALISEVYAQEGQ 771

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
           W+E    ++  +++GLKK PG S I
Sbjct: 772 WNEVANTKARADLSGLKKHPGSSLI 796


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/709 (32%), Positives = 377/709 (53%), Gaps = 3/709 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++ +Y+  G + ++  +FD   +PD   W  L+  Y     F+ES+ L+ +M R   +  
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              +  +L++CS+L +L  G +VH   +K G + D    ++++  YG+   LDDA   F 
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  R+ VSW + IA    N     GL++F  M R G+     +  S   +C  +  L  
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R +H H ++ K   D  +G + + +Y+K   L  A R F  +      +  AM+    R
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G   +A+  F  M+      ++++L  V  +CA      +G+ VHC  I+ G   +   
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI-C 387

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  A+++ Y +C  + E   +   + +++ +SWN +I+   + G   + +    +M  +G
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG 447

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAY 453
           + PD F+  S L AC  + SL+ GL +H  VIK     D FV S+++DMY KCG  + A 
Sbjct: 448 MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ 507

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            L +RI  + VV WN+++ GF  N  S EA   F +M    L+ D  TF T +  C+N+ 
Sbjct: 508 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 567

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            +E GK +H ++I   +  D YI + L DMYAKCGD+  +  VF+ + +R+ VSW+AMI 
Sbjct: 568 TIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 627

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            Y +HG   +A  +F++M    + PN  TF+ +L ACSH G  ++G  YF+ M   + +E
Sbjct: 628 GYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLE 687

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P L+H+ACMVD+L RS   + A K I+SMPF A+  IW  LL+ C+I + +++ +     
Sbjct: 688 PQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASN 747

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +   +D+  Y LLSN+YAE G W +  + R +++   LKK PG S I
Sbjct: 748 VLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 301/576 (52%), Gaps = 7/576 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L +SC+ L +L+   ++HA  + TGL  D    + L++ Y +  SL  +   F    E +
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W   I   + N  +   + L+ +M R    +S   Y S  R+C+++  L +G ++H 
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK  F  D V+ T+I+  Y +   L DAR+ F  + +  V + ++++          E
Sbjct: 275 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 334

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  M+R  +  D V++  +  AC E       + +H   ++    +D  + N+ + 
Sbjct: 335 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC  L+ A   F  ++++ + SW A+I+   ++G +   +  F +ML    +P+  T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CA L  L  G  VH ++I+ G+G +  ++   +++ Y +CG + E +K+   I
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDA-FVASTVVDMYCKCGIIDEAQKLHDRI 513

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G + ++SWN ++S ++    S+EA +   +M   GL PD F+ A+ L  C N+ +++LG 
Sbjct: 514 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG +IK +   DE++ S+L+DMY+KCG    + L+FE+++++  V WN+MICG+  +G
Sbjct: 574 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
             +EA+ +F +M    +  +  TF+  ++ACS++G  + G ++ H     Y +   +   
Sbjct: 634 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 693

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
             + D+  +    Q A +  +SM  + + V W  ++
Sbjct: 694 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 729



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 306/634 (48%), Gaps = 33/634 (5%)

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D V   ++L  Y   G +  A  +FD M   DVVSW+++++ Y       E + +F  M
Sbjct: 81  RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            R GV PD  T   L ++C  L  L     +H   ++  ++ID   G++ + MY KC  L
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A   F  + +R   SW A I+   ++  + + LE F++M  +    +  +  +   SC
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A +  L  G+ +H   I+     +   +G A+++ YA+   +++  +    +    + + 
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDR-VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++    R G+  EA+ L   M    +  D  S++   SAC        G Q+H   IK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D  V ++++D+Y KC     AYL+F+ ++QK  V WN++I    QNG+  + I  
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F++M    ++ D+ T+ + ++AC+ +  LE G  VH K+I  G+  D ++ + + DMY K
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 499

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG +  AQ++ D +  + VVSW+A++  + ++ +  +A   F +MLD G+KP+  TF  +
Sbjct: 500 CGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATV 559

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKMIHSMPF 663
           L  C++  ++E GK     +    +  D    + +VD+ ++ GD+  +   F+ +    F
Sbjct: 560 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDF 619

Query: 664 PANGSIWGALLNGCRIH----KRIDVMKTIEKELSV---------------TGTNDNG-- 702
            +    W A++ G  +H    + + + + ++KE  V                G  D+G  
Sbjct: 620 VS----WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR 675

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           Y+ L++  Y  E   + F     ++++ G  K P
Sbjct: 676 YFHLMTTHYKLEPQLEHFA---CMVDILGRSKGP 706



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 196/375 (52%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLR---KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F +C   +   +  ++H   + +G   D   +  +++ Y +  +L  + L+F   K+ D
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I     N  ++++IL +++M+R      +F Y SVL+AC++L  L  G  VH 
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 476

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           ++IK G   D  + ++++  Y + G +D+A+K+ D++  + VVSW++I++ +  N +  E
Sbjct: 477 KVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEE 536

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             K F  M+  G++PD  T  ++ + C  L ++   + IHG ++++++  D  + ++ + 
Sbjct: 537 AQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVD 596

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCGD+  +   F K+EKR   SW AMI  Y   G   +AL  F +M +    PN  T
Sbjct: 597 MYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHAT 656

Query: 300 LITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + VL +C+ +G   +G +  H       + P+ ++    +++         E  K I++
Sbjct: 657 FVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA-CMVDILGRSKGPQEAVKFINS 715

Query: 359 IG-ERNILSWNMLIS 372
           +  + + + W  L+S
Sbjct: 716 MPFQADAVIWKTLLS 730



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           R+D      +   Y+  GD+ TA  +FD M + +VVSW+A++  Y   G   ++  LF +
Sbjct: 80  RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVE 139

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M   G+ P+  TF  +L +CS    +  G          G+E D++  + +VD+  +   
Sbjct: 140 MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 199

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGC 677
           ++ A    + MP   N   WGA + GC
Sbjct: 200 LDDALCFFYGMP-ERNWVSWGAAIAGC 225


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/709 (32%), Positives = 377/709 (53%), Gaps = 3/709 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++ +Y+  G + ++  +FD   +PD   W  L+  Y     F+ES+ L+ +M R   +  
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 190

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              +  +L++CS+L +L  G +VH   +K G + D    ++++  YG+   LDDA   F 
Sbjct: 191 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 250

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  R+ VSW + IA    N     GL++F  M R G+     +  S   +C  +  L  
Sbjct: 251 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 310

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R +H H ++ K   D  +G + + +Y+K   L  A R F  +      +  AM+    R
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G   +A+  F  M+      ++++L  V  +CA      +G+ VHC  I+ G   +   
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI-C 429

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  A+++ Y +C  + E   +   + +++ +SWN +I+   + G   + +    +M  +G
Sbjct: 430 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG 489

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAY 453
           + PD F+  S L AC  + SL+ GL +H  VIK     D FV S+++DMY KCG  + A 
Sbjct: 490 MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ 549

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            L +RI  + VV WN+++ GF  N  S EA   F +M    L+ D  TF T +  C+N+ 
Sbjct: 550 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 609

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            +E GK +H ++I   +  D YI + L DMYAKCGD+  +  VF+ + +R+ VSW+AMI 
Sbjct: 610 TIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 669

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            Y +HG   +A  +F++M    + PN  TF+ +L ACSH G  ++G  YF+ M   + +E
Sbjct: 670 GYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLE 729

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P L+H+ACMVD+L RS   + A K I+SMPF A+  IW  LL+ C+I + +++ +     
Sbjct: 730 PQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASN 789

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +   +D+  Y LLSN+YAE G W +  + R +++   LKK PG S I
Sbjct: 790 VLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 838



 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 301/576 (52%), Gaps = 7/576 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L +SC+ L +L+   ++HA  + TGL  D    + L++ Y +  SL  +   F    E +
Sbjct: 197 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 256

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W   I   + N  +   + L+ +M R    +S   Y S  R+C+++  L +G ++H 
Sbjct: 257 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 316

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK  F  D V+ T+I+  Y +   L DAR+ F  + +  V + ++++          E
Sbjct: 317 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 376

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  M+R  +  D V++  +  AC E       + +H   ++    +D  + N+ + 
Sbjct: 377 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 436

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC  L+ A   F  ++++ + SW A+I+   ++G +   +  F +ML    +P+  T
Sbjct: 437 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 496

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CA L  L  G  VH ++I+ G+G +  ++   +++ Y +CG + E +K+   I
Sbjct: 497 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDA-FVASTVVDMYCKCGIIDEAQKLHDRI 555

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G + ++SWN ++S ++    S+EA +   +M   GL PD F+ A+ L  C N+ +++LG 
Sbjct: 556 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 615

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG +IK +   DE++ S+L+DMY+KCG    + L+FE+++++  V WN+MICG+  +G
Sbjct: 616 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 675

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
             +EA+ +F +M    +  +  TF+  ++ACS++G  + G ++ H     Y +   +   
Sbjct: 676 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 735

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
             + D+  +    Q A +  +SM  + + V W  ++
Sbjct: 736 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 771



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 306/634 (48%), Gaps = 33/634 (5%)

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D V   ++L  Y   G +  A  +FD M   DVVSW+++++ Y       E + +F  M
Sbjct: 123 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 182

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            R GV PD  T   L ++C  L  L     +H   ++  ++ID   G++ + MY KC  L
Sbjct: 183 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 242

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A   F  + +R   SW A I+   ++  + + LE F++M  +    +  +  +   SC
Sbjct: 243 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 302

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A +  L  G+ +H   I+     +   +G A+++ YA+   +++  +    +    + + 
Sbjct: 303 AAMSCLNTGRQLHAHAIKNKFSSDR-VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 361

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++    R G+  EA+ L   M    +  D  S++   SAC        G Q+H   IK
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D  V ++++D+Y KC     AYL+F+ ++QK  V WN++I    QNG+  + I  
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 481

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F++M    ++ D+ T+ + ++AC+ +  LE G  VH K+I  G+  D ++ + + DMY K
Sbjct: 482 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 541

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG +  AQ++ D +  + VVSW+A++  + ++ +  +A   F +MLD G+KP+  TF  +
Sbjct: 542 CGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATV 601

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKMIHSMPF 663
           L  C++  ++E GK     +    +  D    + +VD+ ++ GD+  +   F+ +    F
Sbjct: 602 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDF 661

Query: 664 PANGSIWGALLNGCRIH----KRIDVMKTIEKELSV---------------TGTNDNG-- 702
            +    W A++ G  +H    + + + + ++KE  V                G  D+G  
Sbjct: 662 VS----WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR 717

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           Y+ L++  Y  E   + F     ++++ G  K P
Sbjct: 718 YFHLMTTHYKLEPQLEHFA---CMVDILGRSKGP 748



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 196/375 (52%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLR---KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F +C   +   +  ++H   + +G   D   +  +++ Y +  +L  + L+F   K+ D
Sbjct: 399 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 458

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I     N  ++++IL +++M+R      +F Y SVL+AC++L  L  G  VH 
Sbjct: 459 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 518

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           ++IK G   D  + ++++  Y + G +D+A+K+ D++  + VVSW++I++ +  N +  E
Sbjct: 519 KVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEE 578

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             K F  M+  G++PD  T  ++ + C  L ++   + IHG ++++++  D  + ++ + 
Sbjct: 579 AQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVD 638

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCGD+  +   F K+EKR   SW AMI  Y   G   +AL  F +M +    PN  T
Sbjct: 639 MYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHAT 698

Query: 300 LITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + VL +C+ +G   +G +  H       + P+ ++    +++         E  K I++
Sbjct: 699 FVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA-CMVDILGRSKGPQEAVKFINS 757

Query: 359 IG-ERNILSWNMLIS 372
           +  + + + W  L+S
Sbjct: 758 MPFQADAVIWKTLLS 772



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           R+D      +   Y+  GD+ TA  +FD M + +VVSW+A++  Y   G   ++  LF +
Sbjct: 122 RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVE 181

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M   G+ P+  TF  +L +CS    +  G          G+E D++  + +VD+  +   
Sbjct: 182 MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRS 241

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGC 677
           ++ A    + MP   N   WGA + GC
Sbjct: 242 LDDALCFFYGMP-ERNWVSWGAAIAGC 267


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/705 (32%), Positives = 387/705 (54%), Gaps = 3/705 (0%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y + GS+  + ++FD   E   F W  ++  Y+ N     ++ +Y +M     +  ++ +
Sbjct: 2   YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
           P +L+AC  + DL  G ++HG  IK G D    +  S++  Y +   ++ ARK+FD+M  
Sbjct: 62  PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121

Query: 159 R-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           R DVVSW+SII++Y  N   +E L +F  M++ GV  +  T  +  +AC +   ++    
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  +L+    +D  + N+ + MY + G +  A   F  +E +   +W +M++ + ++G 
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           + +ALE F  +     +P+ +++I+++ +   LG+L  GK +H   I+ G       +G 
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNI-LVGN 300

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            LI+ YA+C  MS   +    +  ++++SW    + YA+     +ALELL Q+Q  G+  
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           D+  + S L AC  +  L    +IHG+ I+    D  +Q+++ID+Y +CG  + A  +FE
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFE 420

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            I+ K VV W SMI  +  NG + +A+ +F  M    LE D VT ++ + A  ++  L+K
Sbjct: 421 SIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKK 480

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  +I  G   +  I   L DMYA+CG ++ A ++F     RN++ W+AMI  YGM
Sbjct: 481 GKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGM 540

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQ 636
           HG    A  LF +M D  I P+ +TF+ +L+ACSHSG V EGK +   M+  + +EP  +
Sbjct: 541 HGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPE 600

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HY C+VDLL R   +E A++++ SM       +W ALL  CRIH   ++ +   ++L   
Sbjct: 601 HYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLEL 660

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             ++ G Y L+SN++A  G W +  +VR  M+ +GL K PG S I
Sbjct: 661 DLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWI 705



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 248/483 (51%), Gaps = 22/483 (4%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG +L AE  F K+ +R   +W AM+  Y  +G    ALE + +M  +    +  T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L +C  +  L  G  +H   I+ G    + ++  +L+  YA+C  ++   K+   +
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGC-DSFVFVVNSLVALYAKCNDINGARKLFDRM 119

Query: 360 GERN-ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             RN ++SWN +IS Y+  GM  EAL L  +M   G++ ++++ A++L AC +   ++LG
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           +QIH  ++K     D +V ++L+ MY + G    A ++F  ++ K +V WNSM+ GF QN
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G   EA+  F+ +    L+ D+V+ ++ I A   +G L  GK +H   I  G   +I + 
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
             L DMYAKC  +    R FD M+ ++++SW+     Y  +     A  L +Q+   G+ 
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 598 PNEVTFMNILWAC---SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            +     +IL AC   +  G ++E   Y   +R    +P LQ+   ++D+    G I+ A
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGY--TIRGGLSDPVLQN--TIIDVYGECGIIDYA 415

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIH-----KRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            ++  S+      S W ++++ C +H     K ++V  ++++    TG   + Y TL+S 
Sbjct: 416 VRIFESIECKDVVS-WTSMIS-CYVHNGLANKALEVFSSMKE----TGLEPD-YVTLVSI 468

Query: 710 IYA 712
           + A
Sbjct: 469 LSA 471



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 165/304 (54%), Gaps = 1/304 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
            +HA+ +  G   +      LI+ YA+   +      FD     D   W      Y  N 
Sbjct: 282 EIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNK 341

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            + +++ L  ++  E   +   +  S+L AC  L  LG  +++HG  I+ G   D V+Q 
Sbjct: 342 CYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQN 400

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +I+  YGE G +D A ++F+ +  +DVVSW+S+I+ Y  N   ++ L++F SM   G+EP
Sbjct: 401 TIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEP 460

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D+VT++S+  A   L +L+  + IHG ++R+   ++G + N+ + MY++CG +  A + F
Sbjct: 461 DYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIF 520

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
              + R    WTAMIS Y   G+ + A+E F++M + K  P+ IT + +L +C+  G + 
Sbjct: 521 TCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVN 580

Query: 315 EGKS 318
           EGKS
Sbjct: 581 EGKS 584



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 4/168 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S + L+K   +H  ++  G   +   S  L++ YA  GS+  +  +F   K  +  +W  
Sbjct: 474 SLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTA 533

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y  + + E ++ L+ +M  E+    +  + ++L ACS  G +  G K    I+KC 
Sbjct: 534 MISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEG-KSFLEIMKCE 592

Query: 126 FDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIAS 170
           +  +   +  T ++   G   CL++A ++   M +      W +++ +
Sbjct: 593 YQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGA 640


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/735 (32%), Positives = 397/735 (54%), Gaps = 12/735 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++V+GL  D   S  L+  Y+  G +  +R VF+   E +   W+ ++     + F
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGE----KVHGRIIKCGFDKDD 130
           +EES++++    R +    N +I  S ++ACS L   GSG     ++   ++K  FD+D 
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLD--GSGRWMVFQLQSFLVKSRFDRDV 183

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            + T ++  Y + G +D AR VFD +  +  V+W+++I+           L++F+ ++  
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
            V PD   + ++  AC  L  L   + IH H+LR   + D  L N  I  Y KCG + +A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAA 303

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
            + F  +  +   SWT ++S Y ++   ++A+E F  M +   +P++    ++L SCA L
Sbjct: 304 HKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL 363

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L  G  VH   I+  +G +  Y+  +LI+ YA+C  ++E  KV       +++ +N +
Sbjct: 364 HALEFGTQVHAYTIKANLGND-SYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAM 422

Query: 371 ISEYARKGMSKE---ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           I  Y+R G   E   AL +   M+   + P   +  S L A  ++ SL L  QIHG + K
Sbjct: 423 IEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D F  S+LI +YS C     + L+F+ ++ K +V+WNSM  G+ Q   + EA+NL
Sbjct: 483 FGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNL 542

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F ++ L+    DE TF+  + A  N+  L+ G+  H +L+  G+  + YI  AL DMYAK
Sbjct: 543 FLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAK 602

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG  + A + FDS + R+VV W+++I  Y  HG+   A  + ++M+  GI+PN +TF+ +
Sbjct: 603 CGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGV 662

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L ACSH+G VE+G   F  M  FG+EP+ +HY CMV LL R+G +  A ++I  MP    
Sbjct: 663 LSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPA 722

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
             +W +LL+GC     +++ +   +   ++   D+G +TLLSNIYA +G W +  KVR  
Sbjct: 723 AIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRER 782

Query: 727 MEVTGLKKVPGYSTI 741
           M+  G+ K PG S I
Sbjct: 783 MKFEGVVKEPGRSWI 797



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/654 (26%), Positives = 320/654 (48%), Gaps = 42/654 (6%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +L + L+ +    D    T LI+ Y + G++  +RLVFD   E  +  W  +I   +   
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
               S+ L+++++        +I  +VL ACS L  L  G+++H  I++ G +KD  +  
Sbjct: 229 RSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMN 288

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++ +Y + G +  A K+FD M +++++SW+++++ Y  N+   E +++F SM + G++P
Sbjct: 289 VLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKP 348

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D     S+  +C  L +L     +H + ++  +  D  + NS I MY+KC  L  A + F
Sbjct: 349 DMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF 408

Query: 255 VKIEKRCTTSWTAMISCYNRSG--W-FQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
                     + AMI  Y+R G  W    AL  F  M      P+L+T +++L + A L 
Sbjct: 409 DIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLT 468

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L   K +H  + + G+  +  + G ALI  Y+ C  + +   V   +  ++++ WN + 
Sbjct: 469 SLGLSKQIHGLMFKFGLNLDI-FAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--ID 429
           S Y ++  ++EAL L +++Q     PD F+    ++A GN+ SLQLG + H  ++K  ++
Sbjct: 528 SGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLE 587

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           C + ++ ++L+DMY+KCG    A+  F+    + VV WNS+I  +  +G   +A+ +  +
Sbjct: 588 C-NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEK 646

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    +E + +TF+  + ACS+ G +E G      ++ +G+  +       T+ Y     
Sbjct: 647 MMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE-------TEHYV---- 695

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
                                M+   G  G+LN+A  L ++M     KP  + + ++L  
Sbjct: 696 --------------------CMVSLLGRAGRLNEARELIEKM---PTKPAAIVWRSLLSG 732

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           C+ +G+VE  + Y   M I     D   +  + ++ +  G    A K+   M F
Sbjct: 733 CAKAGNVELAE-YAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKF 785



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 216/471 (45%), Gaps = 45/471 (9%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC +L  L   T++HA+ +   L  D   +  LI+ YA+   L  +R VFD F   D
Sbjct: 356 ILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADD 415

Query: 60  SFMWAVLIKCY-----MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             ++  +I+ Y      W     +++ ++H M       S   + S+LRA +SL  LG  
Sbjct: 416 VVLFNAMIEGYSRLGTQWE--LHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           +++HG + K G + D    ++++  Y    CL D+R VFD+M  +D+V W+S+ + Y   
Sbjct: 474 KQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQ 533

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           ++  E L +F  +      PD  T + +  A G L SL+  +  H  +L+R ++ +  + 
Sbjct: 534 SENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYIT 593

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ + MY+KCG    A + F     R    W ++IS Y   G  +KAL+   KM+    E
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIE 653

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           PN IT + VL +C+  G + +G      ++R G+ PE ++                    
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH-------------------- 693

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                       +  ++S   R G   EA EL+ +M T    P +    S LS C   G+
Sbjct: 694 ------------YVCMVSLLGRAGRLNEARELIEKMPT---KPAAIVWRSLLSGCAKAGN 738

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           ++L        I  D KD    + L ++Y+  G    A  + ER++ + VV
Sbjct: 739 VELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVV 789


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 244/719 (33%), Positives = 384/719 (53%), Gaps = 15/719 (2%)

Query: 25  LHYDPPASTRLI--ESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
           L++     TR I    + E+  L  S +   T + P+S +  + +K        E++++ 
Sbjct: 30  LNFSRNIQTRQISLRKHHEISVLNPSSI---TAQNPNSLILELCLK-----GDLEKALIH 81

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
              M   Q ++    Y ++LR C        G +VH  + K        +  ++L  +  
Sbjct: 82  LDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVR 141

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FG L +A  VF KM  RD+ SW+ ++  Y       E L ++H M+  G+ PD  T   +
Sbjct: 142 FGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCV 201

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
              CG L  L   R +H HV+R   + D  + N+ I MY KCGD+ SA   F ++ +R  
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR 261

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW AMIS Y  +    + L  F  M E   +P+L+T+ +V+ +C  LG  R G+ VH  
Sbjct: 262 ISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGY 321

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +I+ G   E   +  +LI+ ++  G   E E V   +  ++++SW  +IS Y + G+ ++
Sbjct: 322 VIKTGFVAEVS-VNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEK 380

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLID 441
           A+E    M+  G++PD  ++AS LSAC  +G L  G+ +H    +        V +SLID
Sbjct: 381 AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLID 440

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MYSKC   + A  +F RI  K+V+ W S+I G   N  S EA+  F QM L+ L+ + VT
Sbjct: 441 MYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVT 499

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            ++ + AC+ IG L  GK +H   +  G+  D ++  AL DMY +CG ++ A   F+S  
Sbjct: 500 LVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-C 558

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           E++V SW+ ++  Y   G+   A  LF +M++S + P+E+TF ++L ACS SG V +G  
Sbjct: 559 EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLE 618

Query: 622 YFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           YF +M   F + P+L+HYA +VDLL R+G +E A++ I  MP   + +IWGALLN CRI+
Sbjct: 619 YFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIY 678

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + +++ +   + +    T   GYY LL N+YA+ G WDE  +VR IM    L   PG S
Sbjct: 679 QNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 201/643 (31%), Positives = 323/643 (50%), Gaps = 50/643 (7%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +R+H+++  T           L+  +   G L  +  VF    E D F W VL+  Y   
Sbjct: 114 SRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKA 173

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            +F+E++ LYH+M+        + +P VLR C  L DL  G +VH  +I+ GF+ D  + 
Sbjct: 174 GYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVV 233

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y + G +  AR VFD+M  RD +SW+++I+ YF+N    EGL++F  M    V+
Sbjct: 234 NALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVD 293

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD +TM S+  AC  L   R  R +HG+V++     +  + NS I M+S  G    AE  
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F K+E +   SWTAMIS Y ++G  +KA+E++  M      P+ IT+ +VL +CAGLG L
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +G  +H    R G+   Y  +  +LI+ Y++C  + +  +V H I  +N++SW  +I  
Sbjct: 414 DKGIMLHEFADRTGL-TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
                 S EAL    QM    L P+S ++ S LSAC  +G+L  G +IH H ++     D
Sbjct: 473 LRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFD 531

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            F+ ++L+DMY +CG    A+  F    +K V  WN ++ G+ Q G    A+ LFH+M  
Sbjct: 532 GFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIE 590

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           + +  DE+TF + + ACS  G +  G       + Y                        
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDG-------LEY------------------------ 619

Query: 553 AQRVFDSMSER-----NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
               F+SM  +     N+  +++++D  G  G+L DA    K+M    I P+   +  +L
Sbjct: 620 ----FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM---PIDPDPAIWGALL 672

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVE-PDLQHYACMVDLLSRSG 649
            AC    +VE G+    A  IF ++   + +Y  + +L + SG
Sbjct: 673 NACRIYQNVELGE--LAAQHIFEMDTKSVGYYILLCNLYADSG 713



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 258/530 (48%), Gaps = 27/530 (5%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  L  L R   +H H++  G   D      LI  Y + G + S+RLVFD     D
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVH 118
              W  +I  Y  N+   E + L+  M+RE     + +   SV+ AC +LGD   G +VH
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVH 319

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G +IK GF  +  +  S++  +   GC D+A  VF KM  +D+VSW+++I+ Y  N    
Sbjct: 320 GYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPE 379

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + ++ +  M  EGV PD +T+ S+  AC  L  L     +H    R  +     + NS I
Sbjct: 380 KAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLI 439

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKC  +  A   F +I  +   SWT++I     +    +AL  F +M+ +  +PN +
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSV 498

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL++VL +CA +G L  GK +H   +R G+G +  +L  AL++ Y  CG+M       ++
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFD-GFLPNALLDMYVRCGRMEPAWNQFNS 557

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             E+++ SWN+L++ YA++G    A+EL  +M    + PD  +  S L AC   G +  G
Sbjct: 558 C-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG 616

Query: 419 LQI-----HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI- 471
           L+      H   I  + K     +S++D+  + G    AY   +++       +W +++ 
Sbjct: 617 LEYFESMEHKFHIAPNLKH---YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673

Query: 472 -CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            C  YQN      + L      +  EMD  +    I  C+     + GKW
Sbjct: 674 ACRIYQN------VELGELAAQHIFEMDTKSVGYYILLCNLYA--DSGKW 715


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/749 (31%), Positives = 398/749 (53%), Gaps = 20/749 (2%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C    +L +   +H  ++ +G++ D      L+  YA+ GS   +  VF    E D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  ++   +   ++ L+ +M RE    + F Y + L+ACS   DL  G++VH 
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK G   D  + ++++  Y + G +  A +VF  M  ++ VSW++++  +    D  +
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M    +     T+ ++ + C    +LR  + +H   +R   ++D  +    + 
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG    A + FV+IE     SW+A+I+C ++ G  ++A E F +M      PN  T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA 358
           L +++ +   LG L  G+S+H  + + G   EYD  +  AL+  Y + G + +  +V  A
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGF--EYDNTVCNALVTMYMKIGSVQDGCRVFEA 491

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
              R+++SWN L+S +         L +  QM   G  P+ ++  S L +C ++  + LG
Sbjct: 492 TTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 551

Query: 419 LQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            Q+H  ++K  +D  D FV ++L+DMY+K  F   A  +F R+ ++ +  W  ++ G+ Q
Sbjct: 552 KQVHAQIVKNSLDGND-FVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 610

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G   +A+  F QM    ++ +E T  +++  CS I  L+ G+ +H   I  G   D+++
Sbjct: 611 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFV 670

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +AL DMYAKCG ++ A+ VFD +  R+ VSW+ +I  Y  HGQ   A   F+ MLD G 
Sbjct: 671 ASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGT 730

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            P+EVTF+ +L ACSH G +EEGK +FN++ +I+G+ P ++HYACMVD+L R+G      
Sbjct: 731 VPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVE 790

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRID-----VMKTIEKELSVTGTNDNGYYTLLSNI 710
             I  M   +N  IW  +L  C++H  I+      MK  E E  +     +  Y LLSN+
Sbjct: 791 SFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEI-----DSNYILLSNM 845

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +A +G WD+   VR++M   G+KK PG S
Sbjct: 846 FAAKGMWDDVTNVRALMSTRGVKKEPGCS 874



 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 172/559 (30%), Positives = 307/559 (54%), Gaps = 4/559 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +LR C+S GDL  G+ +HG++IK G + D  +  S++  Y + G  + A KVF ++ 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDVVSW+++I  +      S  + +F  M REGVE +  T  +  +AC     L   + 
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H   ++     D  +G++ + +Y+KCG+++ AER F+ + K+   SW A+++ + + G 
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLG 336
            +K L  F +M   +   +  TL TVL  CA  G LR G+ VH   IR  +G E D ++ 
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIR--IGCELDEFIS 368

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
             L++ Y++CG   +  KV   I + +++SW+ +I+   +KG S+EA E+  +M+  G++
Sbjct: 369 CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI 428

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLL 455
           P+ F++AS +SA  ++G L  G  IH  V K   + D  V ++L+ MY K G       +
Sbjct: 429 PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           FE    + ++ WN+++ GF+ N      + +F+QM       +  TF++ +++CS++  +
Sbjct: 489 FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 548

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + GK VH +++   +  + ++ TAL DMYAK   L+ A+ +F+ + +R++ +W+ ++  Y
Sbjct: 549 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 608

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
              GQ   A   F QM   G+KPNE T  + L  CS   +++ G+   +     G   D+
Sbjct: 609 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDM 668

Query: 636 QHYACMVDLLSRSGDIEGA 654
              + +VD+ ++ G +E A
Sbjct: 669 FVASALVDMYAKCGCVEDA 687


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/646 (35%), Positives = 371/646 (57%), Gaps = 4/646 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y SVL+ C+    L  G++VH  II  G   D+ +   ++  Y   G L   RK+FDK+ 
Sbjct: 97  YCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIM 156

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +  V  W+ +++ Y    +  E + +F  M + GV  +  T   + +    L  ++  + 
Sbjct: 157 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 216

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HG+VL+     +  + NS I  Y K G + SA   F ++ +    SW +MI+    +G+
Sbjct: 217 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 276

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
               LE F++ML +  E +L TL++VL +CA +G L  G+++H   ++     E  +   
Sbjct: 277 SGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVF-SN 335

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L++ Y++CG ++   +V   +G+  I+SW  +I+ Y R+G+  +A+ L  +MQ+ G+ P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
           D ++V S + AC    SL  G  +H +VIK        V ++LI+MY+KCG    A L+F
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 455

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
            +I  K +V WN+MI G+ QN    EA+ LF  M     + D++T    + AC+ +  L+
Sbjct: 456 SKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALD 514

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           KG+ +H  ++  G   D+++  AL DMYAKCG L  AQ +FD + +++++SW+ MI  YG
Sbjct: 515 KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 574

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDL 635
           MHG  N+A S F +M  +GI+P+E +F  IL ACSHSG + EG  +FN+MR   GVEP L
Sbjct: 575 MHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKL 634

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HYAC+VDLL+R G++  A+K I SMP   + +IWG LL+GCRIH  + + + + + +  
Sbjct: 635 EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE 694

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              ++  YY +L+N+YAE   W+E  K+R  M+  G K+ PG S I
Sbjct: 695 LEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWI 740



 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/596 (30%), Positives = 315/596 (52%), Gaps = 7/596 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H+ ++  G+  D     +L+  Y   G L   R +FD       F+W +L+  Y    
Sbjct: 115 RVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIG 174

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F ES+ L+ KM +     + + +  VL+  ++LG +   ++VHG ++K GF  +  +  
Sbjct: 175 NFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVN 234

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y +FG ++ A  +FD+++  DVVSW+S+I     N     GL++F  M+  GVE 
Sbjct: 235 SLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV 294

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T++S+  AC  + +L   R++HG  ++     +    N+ + MYSKCG+L  A   F
Sbjct: 295 DLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVF 354

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
           VK+      SWT++I+ Y R G +  A+  F +M      P++ T+ +++ +CA    L 
Sbjct: 355 VKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD 414

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH  +I+ GMG     +  ALI  YA+CG + E   V   I  ++I+SWN +I  Y
Sbjct: 415 KGRDVHSYVIKNGMGSNLP-VTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGY 473

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
           ++  +  EALEL + MQ     PD  ++A  L AC  + +L  G +IHGH+++     D 
Sbjct: 474 SQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL 532

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V  +L+DMY+KCG   LA LLF+ I +K ++ W  MI G+  +G   EAI+ F++M + 
Sbjct: 533 HVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIA 592

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            +E DE +F   + ACS+ G L +G K+ +      GV   +     + D+ A+ G+L  
Sbjct: 593 GIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSK 652

Query: 553 AQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           A +  +SM  + +   W  ++    +H  +  A  + + + +  ++P+   +  +L
Sbjct: 653 AYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE--LEPDNTRYYVVL 706



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 249/474 (52%), Gaps = 7/474 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +   +++  R+H ++L  G   +      LI +Y + G + S+  +FD   EPD   W
Sbjct: 205 FAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSW 264

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I   + N F    + ++ +M+     +      SVL AC+++G+L  G  +HG  +K
Sbjct: 265 NSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVK 324

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F ++ V   ++L  Y + G L+ A +VF KM    +VSW+SIIA+Y      S+ + +
Sbjct: 325 ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGL 384

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M  +GV PD  T+ S+  AC    SL   R +H +V++  +  + P+ N+ I MY+K
Sbjct: 385 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 444

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG +  A   F KI  +   SW  MI  Y+++    +ALE F+ M + + +P+ IT+  V
Sbjct: 445 CGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACV 503

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CAGL  L +G+ +H  I+R+G   +  ++  AL++ YA+CG +   + +   I +++
Sbjct: 504 LPACAGLAALDKGREIHGHILRRGYFSDL-HVACALVDMYAKCGLLVLAQLLFDMIPKKD 562

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SW ++I+ Y   G   EA+    +M+  G+ PD  S ++ L+AC + G L  G +   
Sbjct: 563 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFF- 621

Query: 424 HVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICG 473
           + ++ +C  E      + ++D+ ++ G  + AY   E +  K    +W  ++ G
Sbjct: 622 NSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 217/425 (51%), Gaps = 5/425 (1%)

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           +F       T +  A I+ +   G  + A+E   K      E  L +  +VL  CA    
Sbjct: 52  SFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTK--SKSYELGLNSYCSVLQLCAEKKS 109

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +GK VH  II  G+  + + LG  L+  Y  CG + +  K+   I    +  WN+L+S
Sbjct: 110 LEDGKRVHSVIISNGISVD-EALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 168

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
           EYA+ G  +E++ L  +MQ  G++ + ++    L     +G ++   ++HG+V+K+    
Sbjct: 169 EYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 228

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           +  V +SLI  Y K G    A+ LF+ + +  VV WNSMI G   NG S   + +F QM 
Sbjct: 229 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 288

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           +  +E+D  T ++ + AC+NIG L  G+ +H   +     +++     L DMY+KCG+L 
Sbjct: 289 ILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 348

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A  VF  M +  +VSW+++I  Y   G  +DA  LF +M   G++P+  T  +I+ AC+
Sbjct: 349 GATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 408

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            S S+++G+   + +   G+  +L     ++++ ++ G +E A  +   +P     S W 
Sbjct: 409 CSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS-WN 467

Query: 672 ALLNG 676
            ++ G
Sbjct: 468 TMIGG 472



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 4/197 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       L K   +H H+L  G   D   +  L++ YA+ G L  ++L+FD   + D 
Sbjct: 504 LPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDL 563

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W V+I  Y  + F  E+I  +++M           + ++L ACS  G L  G K    
Sbjct: 564 ISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNS 623

Query: 121 II-KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVS 178
           +  +CG +        ++      G L  A K  + M  + D   W  +++    + DV 
Sbjct: 624 MRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVK 683

Query: 179 EGLKMFHSMVREGVEPD 195
              K+   +    +EPD
Sbjct: 684 LAEKVAEHIFE--LEPD 698


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/688 (34%), Positives = 372/688 (54%), Gaps = 10/688 (1%)

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
           T + P+S +  + +K        E++++    M   Q ++    Y ++LR C        
Sbjct: 58  TAQNPNSLILELCLK-----GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASE 112

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G +VH  + K        +  ++L  +  FG L +A  VF KM  RD+ SW+ ++  Y  
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                E L ++H M+  G+ PD  T   +   CG L  L   R +H HV+R   + D  +
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDV 232

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N+ I MY KCGD+ SA   F ++ +R   SW AMIS Y  +    + L  F  M E   
Sbjct: 233 VNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFV 292

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           +P+L+T+ +V+ +C  LG  R G+ VH  +I+ G   E   +  +LI+ ++  G   E E
Sbjct: 293 DPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS-VNNSLIQMHSSVGCWDEAE 351

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            V   +  ++++SW  +IS Y + G+ ++A+E    M+  G++PD  ++AS LSAC  +G
Sbjct: 352 MVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLG 411

Query: 414 SLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L  G+ +H    +        V +SLIDMYSKC   + A  +F RI  K+V+ W S+I 
Sbjct: 412 LLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIIL 471

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G   N  S EA+  F QM L+ L+ + VT ++ + AC+ IG L  GK +H   +  G+  
Sbjct: 472 GLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGF 530

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D ++  AL DMY +CG ++ A   F+S  E++V SW+ ++  Y   G+   A  LF +M+
Sbjct: 531 DGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMI 589

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDI 651
           +S + P+E+TF ++L ACS SG V +G  YF +M   F + P+L+HYA +VDLL R+G +
Sbjct: 590 ESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRL 649

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           E A++ I  MP   + +IWGALLN CRI++ +++ +   + +    T   GYY LL N+Y
Sbjct: 650 EDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLY 709

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           A+ G WDE  +VR IM    L   PG S
Sbjct: 710 ADSGKWDEVARVRKIMRENRLTVDPGCS 737



 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 201/643 (31%), Positives = 323/643 (50%), Gaps = 50/643 (7%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +R+H+++  T           L+  +   G L  +  VF    E D F W VL+  Y   
Sbjct: 114 SRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKA 173

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            +F+E++ LYH+M+        + +P VLR C  L DL  G +VH  +I+ GF+ D  + 
Sbjct: 174 GYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVV 233

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y + G +  AR VFD+M  RD +SW+++I+ YF+N    EGL++F  M    V+
Sbjct: 234 NALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVD 293

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD +TM S+  AC  L   R  R +HG+V++     +  + NS I M+S  G    AE  
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F K+E +   SWTAMIS Y ++G  +KA+E++  M      P+ IT+ +VL +CAGLG L
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +G  +H    R G+   Y  +  +LI+ Y++C  + +  +V H I  +N++SW  +I  
Sbjct: 414 DKGIMLHEFADRTGL-TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
                 S EAL    QM    L P+S ++ S LSAC  +G+L  G +IH H ++     D
Sbjct: 473 LRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFD 531

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            F+ ++L+DMY +CG    A+  F    +K V  WN ++ G+ Q G    A+ LFH+M  
Sbjct: 532 GFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIE 590

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           + +  DE+TF + + ACS  G +  G       + Y                        
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDG-------LEY------------------------ 619

Query: 553 AQRVFDSMSER-----NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
               F+SM  +     N+  +++++D  G  G+L DA    K+M    I P+   +  +L
Sbjct: 620 ----FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM---PIDPDPAIWGALL 672

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVE-PDLQHYACMVDLLSRSG 649
            AC    +VE G+    A  IF ++   + +Y  + +L + SG
Sbjct: 673 NACRIYQNVELGE--LAAQHIFEMDTKSVGYYILLCNLYADSG 713



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 258/530 (48%), Gaps = 27/530 (5%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  L  L R   +H H++  G   D      LI  Y + G + S+RLVFD     D
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVH 118
              W  +I  Y  N+   E + L+  M+RE     + +   SV+ AC +LGD   G +VH
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVH 319

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G +IK GF  +  +  S++  +   GC D+A  VF KM  +D+VSW+++I+ Y  N    
Sbjct: 320 GYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPE 379

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + ++ +  M  EGV PD +T+ S+  AC  L  L     +H    R  +     + NS I
Sbjct: 380 KAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLI 439

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKC  +  A   F +I  +   SWT++I     +    +AL  F +M+ +  +PN +
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSV 498

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL++VL +CA +G L  GK +H   +R G+G +  +L  AL++ Y  CG+M       ++
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFD-GFLPNALLDMYVRCGRMEPAWNQFNS 557

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             E+++ SWN+L++ YA++G    A+EL  +M    + PD  +  S L AC   G +  G
Sbjct: 558 C-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG 616

Query: 419 LQI-----HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI- 471
           L+      H   I  + K     +S++D+  + G    AY   +++       +W +++ 
Sbjct: 617 LEYFESMEHKFHIAPNLKH---YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673

Query: 472 -CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            C  YQN      + L      +  EMD  +    I  C+     + GKW
Sbjct: 674 ACRIYQN------VELGELAAQHIFEMDTKSVGYYILLCNLYA--DSGKW 715


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/650 (34%), Positives = 372/650 (57%), Gaps = 18/650 (2%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L  C ++  L    K+H  ++  G  +D + +T ++  YG FG ++ AR +FD++ + 
Sbjct: 44  SLLGICKTVSSL---RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNP 100

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSI 218
           D+ SW  +I  YF N   SE ++ +++ +R+ + E D V    + +AC EL      R +
Sbjct: 101 DLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKL 160

Query: 219 HGHVLRRKIKIDGPLGNSFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           H  +    +K+  P  +SF++     MY+KC ++  + R F +I  R    WT+MI  Y 
Sbjct: 161 HCQI----VKVGSP--DSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYV 214

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++   ++ L  F +M E   E N  TL +++ +C  LG L +GK VH  +I+ G      
Sbjct: 215 QNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLN-S 273

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +L   L++ Y +CG + +   V   +   +++SW  +I  YA++G  +EAL+L    +  
Sbjct: 274 FLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWK 333

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
            L+P++ + +S LSAC   GSL +G  +H   IK+  +D   +++L+DMY+KC     A 
Sbjct: 334 DLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENALVDMYAKCHMIGDAR 393

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +FE +  K V+ WNS+I G+ QNG + EA+ LF QM  + +  D +T ++ + AC+++G
Sbjct: 394 YVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG 453

Query: 514 QLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
               G  +H   I  G +   +Y+ TAL + YAKCGD ++A+ +FD M E+N ++WSAMI
Sbjct: 454 AYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMI 513

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             YG+ G  + +  LF  ML   ++PNEV F  IL ACSHSG + EG  YFN M +++  
Sbjct: 514 GGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNF 573

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            P ++HYACMVDLL+R+G +E A   I  +P   + S+ GA L+GCR+H R D+ +   +
Sbjct: 574 VPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVR 633

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +     +   YY L+SN+YA EG W +  +V  +M+  GL K+PG+S +
Sbjct: 634 RMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLV 683



 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/603 (30%), Positives = 329/603 (54%), Gaps = 12/603 (1%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           C  +  L ++HA L+V GL  D    T+L+  Y   G +  +RL+FD  + PD + W V+
Sbjct: 49  CKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVM 108

Query: 67  IKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           I+ Y  N+ + E +  Y+  +R+      N ++  VL+ACS L +   G K+H +I+K G
Sbjct: 109 IRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG 168

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
              D  + T ++  Y +   ++D+R+VFD++  R+VV W+S+I  Y  N  + EGL +F+
Sbjct: 169 -SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFN 227

Query: 186 SMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
            M REG VE +  T+ SL  AC +L +L   + +HG+V++    ++  L    + +Y KC
Sbjct: 228 RM-REGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKC 286

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           GD+  A   F ++      SWTAMI  Y + G+ ++AL+ F         PN +T  +VL
Sbjct: 287 GDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVL 346

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +CA  G L  G+SVHC  I+  +G E      AL++ YA+C  + +   V   + ++++
Sbjct: 347 SACAQTGSLNMGRSVHCLGIK--LGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDV 404

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           ++WN +IS Y + G + EALEL  QM++  + PD+ ++ S LSAC +VG+ ++G  +HG+
Sbjct: 405 IAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGY 464

Query: 425 VIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            IK  +     +V ++L++ Y+KCG    A ++F+ + +K+ + W++MI G+   G+   
Sbjct: 465 AIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSR 524

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALT 541
           ++ LF  M    LE +EV F T + ACS+ G L +G ++ +     Y     +     + 
Sbjct: 525 SLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMV 584

Query: 542 DMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
           D+ A+ G L+ A    + +  + +V    A +    +H + +      ++ML+  + P++
Sbjct: 585 DLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLE--LHPDK 642

Query: 601 VTF 603
             +
Sbjct: 643 ACY 645



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 244/480 (50%), Gaps = 14/480 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+ LR+     +LH  ++  G   D    T L++ YA+   +  SR VFD   + +
Sbjct: 144 VLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRN 202

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ N+  +E ++L+++M       + +   S++ AC+ LG L  G+ VHG
Sbjct: 203 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 262

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +IK GFD +  + T +L  Y + G + DA  VFD++++ D+VSW+++I  Y       E
Sbjct: 263 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPRE 322

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F     + + P+ VT  S+  AC +  SL   RS+H   ++   + D    N+ + 
Sbjct: 323 ALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVD 381

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KC  +  A   F  +  +   +W ++IS Y ++G+  +ALE F +M      P+ IT
Sbjct: 382 MYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAIT 441

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L++VL +CA +G  R G S+H   I+ G+     Y+G AL+ FYA+CG       +   +
Sbjct: 442 LVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEM 501

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           GE+N ++W+ +I  Y  +G    +LEL   M    L P+     + LSAC + G L  G 
Sbjct: 502 GEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGW 561

Query: 420 QIHGHVIKIDCKDEFVQS-----SLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
           +    + ++     FV S      ++D+ ++ G    A    E+I  Q  V +  + + G
Sbjct: 562 RYFNTMCQV---YNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHG 618


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/619 (34%), Positives = 353/619 (57%), Gaps = 3/619 (0%)

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ D+ + +S++  Y E GC++DAR++FDKM ++D V W+ ++  +    + +  +K+F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M     +P+ +T  S+   C           +HG V+      D  + N+ + MYSK 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G L  A + F  +      +W  MI+ + ++G+  +A   F +M+     P+ IT  + L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            S      L++GK +H  I+R G+  +  +L  ALI+ Y +C  +    K+       +I
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDV-FLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +    +IS Y   G++ +ALE+   +    + P++ ++AS L AC  + +L LG ++H +
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 425 VIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           ++K    +   V S+++DMY+KCG  +LAY +F R+ +K  V WN++I    QNG   EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           I+LF QM    L  D V+   A+ AC+N+  L  GK +H  +I      +++ ++AL DM
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDM 420

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y KCG+L  A+ VFD M E+N VSW+++I  YG HG L  + +LF +ML+ GI+P+ VTF
Sbjct: 421 YGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + IL AC H+G V++G  YF  M   +G+   ++HYAC+VDL  R+G +  AF+ I +MP
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMP 540

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
           F  +  +WG LL  CR+H  +++ +   + L      ++G Y LLSN++A+ G W    K
Sbjct: 541 FSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRK 600

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +RS+M+  G++KVPGYS I
Sbjct: 601 IRSLMKKRGVQKVPGYSWI 619



 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 181/573 (31%), Positives = 310/573 (54%), Gaps = 4/573 (0%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           G + D    + LI+ YAE G +  +R +FD     D  +W V++  ++       ++ ++
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M   Q   ++  + SVL  C+S      G ++HG +I CGF  D ++  +++  Y +F
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L DA K+F+ M   +VV+W+ +IA +  N  + E   +F  M+  GV PD +T  S  
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            +  E  SL+  + IHG++LR  I +D  L ++ I +Y KC D+  A + F +       
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
             TA+IS Y  +G    ALE F  +LE K  PN +TL +VL +CAGL  L  GK +H  I
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           ++ G+  E  ++G A+++ YA+CG++    ++   + E++ + WN +I+  ++ G  +EA
Sbjct: 302 LKHGLD-ERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDM 442
           ++L  QM   GL  D  S++++LSAC N+ +L  G  IH  +IK     E F +S+LIDM
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDM 420

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y KCG  ++A  +F+ +++K+ V WNS+I  +  +G+   ++ LFH+M  + ++ D VTF
Sbjct: 421 YGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480

Query: 503 LTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           LT + AC + GQ++KG ++       YG+   +     + D++ + G L  A     +M 
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMP 540

Query: 562 -ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
              +   W  ++    +HG +  A    + +LD
Sbjct: 541 FSPDDGVWGTLLGACRVHGNVELAEVASRCLLD 573



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 220/409 (53%), Gaps = 5/409 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            +LH  ++  G H+DP  +  L+  Y++ G L  +  +F+T  + +   W  +I  ++ N
Sbjct: 93  NQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQN 152

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            F +E+ LL+ +MI    +  +  + S L + +    L  G+++HG I++ G   D  ++
Sbjct: 153 GFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLK 212

Query: 134 TSILCTYGEFGCLDD--ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           ++++  Y  F C D   A K+F + T+ D+V  ++II+ Y  N   ++ L++F  ++ E 
Sbjct: 213 SALIDIY--FKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEK 270

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           + P+ VT+ S+  AC  L +L   + +H ++L+  +     +G++ + MY+KCG L  A 
Sbjct: 271 MSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAY 330

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F ++ ++    W A+I+  +++G  Q+A++ F +M       + +++   L +CA L 
Sbjct: 331 QIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLP 390

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  GK++H  +I+     E  +   ALI+ Y +CG +S    V   + E+N +SWN +I
Sbjct: 391 ALHHGKAIHSFMIKGAFDSEV-FAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSII 449

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           + Y   G  + +L L  +M   G+ PD  +  + LSACG+ G +  G+Q
Sbjct: 450 AAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQ 498



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 177/357 (49%), Gaps = 2/357 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +L++   +H ++L  G+  D    + LI+ Y +   +  +  +F      D 
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +   +I  Y+ N    +++ ++  ++ E+ + +     SVL AC+ L  L  G+++H  
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K G D+   + ++I+  Y + G LD A ++F +M  +D V W++II +   N    E 
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M REG+  D V++ +   AC  L +L   ++IH  +++     +    ++ I M
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDM 420

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG+L  A   F  + ++   SW ++I+ Y   G  + +L  F KMLE   +P+ +T 
Sbjct: 421 YGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +T+L +C   G + +G +   C     G+    ++    +++ +   G+++E  + I
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYA-CIVDLFGRAGRLNEAFETI 536


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/728 (31%), Positives = 384/728 (52%), Gaps = 3/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +V GL  D      LI+ YA+ G +  +R VF      D   W  ++  Y  +  
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E+  LY +M       + ++  SVL AC+       G  +H ++ K  F  +  +  +
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y  FG    A +VF  M   D V+++++I+ +         L++F  M   G+ PD
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT+ SL  AC  +  L+  + +H ++L+  +  D     S + +Y KCGD+ +A   F 
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN 304

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
             ++     W  M+  Y +     K+ E F +M      PN  T   +L +C   G +  
Sbjct: 305 LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIEL 364

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H   I+ G   +  Y+   LI+ Y++ G + +  K++  + +R+++SW  +I+ Y 
Sbjct: 365 GEQIHSLSIKNGFESDM-YVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCKDEF 434
           +    +EAL    +MQ  G+ PD+  +AS+ SAC  + +++ GLQIH  V +     D  
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++L+++Y++CG    A+ LF  I+ K  + WN +I GF Q+    +A+ +F +M    
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAG 543

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
            + +  TF++AI A +N+  +++GK VH + +  G   +  +  AL  +Y KCG ++ A+
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F  MS RN VSW+ +I     HG+  +A  LF QM   G+KPN+VTF+ +L ACSH G
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 663

Query: 615 SVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            VEEG  YF +M  ++G+ P   HYAC+VD+L R+G ++ A + +  MP  AN  IW  L
Sbjct: 664 LVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTL 723

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ C++HK I++ +   K L     +D+  Y LLSN YA  G W    +VR +M+  G++
Sbjct: 724 LSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIR 783

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 784 KEPGRSWI 791



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 167/630 (26%), Positives = 303/630 (48%), Gaps = 13/630 (2%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H   +  G   D +I   ++  Y + G +  AR+VF +++SRD VSW ++++ Y  + 
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E  +++  M    V P    + S+  AC +       R IH  V ++    +  +GN
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + I +Y   G    AER F  +      ++  +IS + + G  + AL+ F +M      P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +T+ ++L +CA +G L++GK +H  +++ GM  +Y   G +L++ Y +CG +     +
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEG-SLLDLYVKCGDIETAHDI 302

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            +     N++ WN+++  Y +     ++ E+  QMQ  G+ P+ F+    L  C   G +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           +LG QIH   IK   + D +V   LIDMYSK G  + A  + E ++++ VV W SMI G+
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGY 422

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            Q+    EA+  F +M    +  D +   +A  AC+ I  + +G  +H ++   G   DI
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADI 482

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            I   L ++YA+CG  + A  +F  +  ++ ++W+ +I  +G       A  +F +M  +
Sbjct: 483 SIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQA 542

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           G K N  TF++ + A ++   +++GK         G   + +    ++ L  + G IE A
Sbjct: 543 GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDA 602

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKR----IDVMKTIEKE-LSVTGTNDNGYYTLLSN 709
            KMI S     N   W  ++  C  H R    +D+   +++E L        G     S+
Sbjct: 603 -KMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSH 661

Query: 710 I-YAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
           +   EEG        +S+  V GL  +P +
Sbjct: 662 VGLVEEG----LSYFKSMSNVYGLNPIPDH 687



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 267/535 (49%), Gaps = 13/535 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  +L+K  +LH++LL  G+ +D      L++ Y + G + ++  +F+     +  +W +
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNL 316

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  Y   +   +S  ++ +M       + F YP +LR C+  G +  GE++H   IK G
Sbjct: 317 MLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNG 376

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F+ D  +   ++  Y ++GCLD ARK+ + +  RDVVSW+S+IA Y  +    E L  F 
Sbjct: 377 FESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFK 436

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   GV PD + + S A AC  + ++R    IH  V       D  + N+ + +Y++CG
Sbjct: 437 EMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCG 496

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
               A   F +IE +   +W  +IS + +S  +++AL  F+KM +   + N+ T I+ + 
Sbjct: 497 RSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAIS 556

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           + A L  +++GK VH + ++ G   E + +  ALI  Y +CG + + + +   +  RN +
Sbjct: 557 ALANLADIKQGKQVHGRAVKTGHTSETE-VANALISLYGKCGSIEDAKMIFSEMSLRNEV 615

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN +I+  ++ G   EAL+L  QM+  GL P+  +    L+AC +VG ++ GL     +
Sbjct: 616 SWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSM 675

Query: 426 IKI----DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNG 478
             +       D +  + ++D+  + G  + A    + +    + ++W +++  C  ++N 
Sbjct: 676 SNVYGLNPIPDHY--ACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKN- 732

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             +E   L  +  L     D  +++    A +  G+      V   +   G+RK+
Sbjct: 733 --IEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/646 (34%), Positives = 370/646 (57%), Gaps = 4/646 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y SVL+ C+ L  L  G++VH  I   G   D+V+   ++  Y   G L   R++FD + 
Sbjct: 60  YCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGIL 119

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +  +  W+ +++ Y    +  E + +F  M   G+  D  T   + +       +R  + 
Sbjct: 120 NDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKR 179

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HG+VL+        + NS I  Y KCG++ SA   F ++  R   SW +MIS    +G+
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGF 239

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +  LE F++ML +  + +  TL+ VL +CA +G L  G+++H   ++ G      +   
Sbjct: 240 SRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMF-NN 298

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L++ Y++CG ++   +V   +GE  I+SW  +I+ + R+G+  EA+ L  +MQ+ GL P
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRP 358

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
           D ++V S + AC    SL  G ++H H+ K +      V ++L++MY+KCG    A L+F
Sbjct: 359 DIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIF 418

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
            ++  K++V WN+MI G+ QN    EA+ LF  M    L+ D+VT    + AC+ +  LE
Sbjct: 419 SQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALE 477

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           KG+ +H  ++  G   D+++  AL DMY KCG L  AQ++FD + +++++ W+ MI  YG
Sbjct: 478 KGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYG 537

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDL 635
           MHG   +A S F++M  +GI+P E +F +IL+AC+HSG ++EG   F++M+    +EP L
Sbjct: 538 MHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKL 597

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HYACMVDLL RSG++  A+K I +MP   + +IWGALL+GCRIH  +++ + + + +  
Sbjct: 598 EHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFE 657

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               +  YY LL+N+YAE   W+E  K++  +   GLK   G S I
Sbjct: 658 LEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWI 703



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 171/611 (27%), Positives = 315/611 (51%), Gaps = 10/611 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + + C  L+ L    R+H+ +   G+  D     +L+  Y   G L   R +FD      
Sbjct: 63  VLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDK 122

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F+W +L+  Y     + ES+ L+ KM        ++ +  VL+  ++   +   ++VHG
Sbjct: 123 IFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHG 182

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K GF   + +  S++  Y + G ++ AR +FD+++ RDVVSW+S+I+    N     
Sbjct: 183 YVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRN 242

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           GL+ F  M+  GV+ D  T++++  AC  + +L   R++H + ++          N+ + 
Sbjct: 243 GLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLD 302

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG+L  A   FVK+ +    SWT++I+ + R G   +A+  F +M      P++  
Sbjct: 303 MYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYA 362

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +V+ +CA    L +G+ VH  I +  MG     +  AL+  YA+CG M E   +   +
Sbjct: 363 VTSVVHACACSNSLDKGREVHNHIKKNNMGSNLP-VSNALMNMYAKCGSMEEANLIFSQL 421

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             +NI+SWN +I  Y++  +  EAL+L + MQ   L PD  ++A  L AC  + +L+ G 
Sbjct: 422 PVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGR 480

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           +IHGH+++     D  V  +L+DMY KCG   LA  LF+ I +K +++W  MI G+  +G
Sbjct: 481 EIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHG 540

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY-GVRKDIYID 537
              EAI+ F +M +  +E +E +F + + AC++ G L++G  +   + S   +   +   
Sbjct: 541 FGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHY 600

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             + D+  + G+L  A +  ++M  + +   W A++    +H  +  A  + + + +  +
Sbjct: 601 ACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFE--L 658

Query: 597 KPNEVTFMNIL 607
           +P    +  +L
Sbjct: 659 EPENTRYYVLL 669



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 264/522 (50%), Gaps = 8/522 (1%)

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            V  ++ I  + +  D+   +K+     R  +E +  T  S+ + C EL SL   + +H 
Sbjct: 24  TVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHS 81

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            +    + ID  LG   + MY  CGDL+   R F  I       W  ++S Y + G +++
Sbjct: 82  IISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRE 141

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           ++  F KM E+    +  T   VL   A    +RE K VH  +++ G G  Y+ +  +LI
Sbjct: 142 SVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGS-YNAVVNSLI 200

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             Y +CG++     +   + +R+++SWN +IS     G S+  LE  +QM   G+  DS 
Sbjct: 201 AAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSA 260

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERI 459
           ++ + L AC NVG+L LG  +H + +K       +  ++L+DMYSKCG  N A  +F ++
Sbjct: 261 TLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKM 320

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
            + ++V W S+I    + G   EAI LF +M    L  D     + + AC+    L+KG+
Sbjct: 321 GETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGR 380

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
            VH+ +    +  ++ +  AL +MYAKCG ++ A  +F  +  +N+VSW+ MI  Y  + 
Sbjct: 381 EVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNS 440

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA 639
             N+A  LF  M    +KP++VT   +L AC+   ++E+G+     +   G   DL H A
Sbjct: 441 LPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDL-HVA 498

Query: 640 C-MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           C +VD+  + G +  A ++   +P   +  +W  ++ G  +H
Sbjct: 499 CALVDMYVKCGLLVLAQQLFDMIP-KKDMILWTVMIAGYGMH 539



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       L K   +H H+L  G   D   +  L++ Y + G L  ++ +FD   + D 
Sbjct: 467 LPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDM 526

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +W V+I  Y  + F +E+I  + KM           + S+L AC+  G L  G K+
Sbjct: 527 ILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKL 583


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/666 (34%), Positives = 362/666 (54%), Gaps = 5/666 (0%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E+++     M+  +  +    Y ++LR C        G +V+  +          +  +
Sbjct: 78  LEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNA 137

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  +  FG L DA  VF KM+ RDV SW+ ++  Y       E L ++H M+   + P+
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+ + C  +  +   + IH HV+R   + D  +GN+ I MY KCGD+ +A   F 
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+ KR   SW AMIS Y  +G   + LE F  M E+  +P+LIT+ TV  +C  L   R 
Sbjct: 258 KMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ VH  +++   G +   +  +LI+ Y+  G++ E E V   +  ++++SW  +I+   
Sbjct: 318 GRGVHGYVVKSEFGGDIS-MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
              +  +A+E    M+  G++PD  ++ S LSAC  +G L LG+++H   IK        
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVI 436

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V +SLIDMYSKC   + A  +F  I  K+VV W S+I G   N  S EA+  F QM    
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ES 495

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ + VT ++ + AC+ IG L +GK +H   +  GV  D ++  A+ DMY +CG    A 
Sbjct: 496 MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPAL 555

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             F+S  +++V +W+ ++  Y   GQ   A  LF +ML+  I P+E+TF+++L ACS SG
Sbjct: 556 NQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            V EG  YFN M+  + + P+L+HYAC+VD+L R+G ++ A+  I  MP   + +IWGAL
Sbjct: 615 MVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGAL 674

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           LN CRIH+ +++ +   K +        GYY LL N+YA  GNWD+  KVRS+M   GL 
Sbjct: 675 LNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLS 734

Query: 734 KVPGYS 739
             PG S
Sbjct: 735 ADPGCS 740



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 189/597 (31%), Positives = 316/597 (52%), Gaps = 41/597 (6%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  +   G+L  +  VF    E D F W VL+  Y     F+E++ LYH+M+  +   +
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            + +PSVL+ C+ + D+  G+++H  +I+ GF+ D  +  +++  Y + G + +AR +FD
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KM  RD +SW+++I+ YF+N    EGL++F  M    V+PD +TM ++A AC  L + R 
Sbjct: 258 KMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R +HG+V++ +   D  + NS I MYS  G L  AE  F ++E +   SWTAMI+    
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377

Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
                KA+E++ KM+E++   P+ ITL++VL +CA +G L  G  +H   I+ G+   + 
Sbjct: 378 HKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL-VSHV 435

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  +LI+ Y++C  +    +V   I  +N++SW  LI        S EAL    QM+  
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE- 494

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
            + P+S ++ S LSAC  +G+L  G +IH H ++     D F+ ++++DMY +CG K  A
Sbjct: 495 SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
              F   Q+K V  WN ++ G+ Q G +  A+ LF +M    +  DE+TF++ + ACS  
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G + +G      L  + + K+ Y  T                         N+  ++ ++
Sbjct: 614 GMVTEG------LEYFNIMKNKYNLTP------------------------NLKHYACVV 643

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           D  G  GQL+DA    + M    I+P+   +  +L AC    +VE G+    A R+F
Sbjct: 644 DILGRAGQLDDAYDFIQDM---PIRPDAAIWGALLNACRIHRNVELGEIA--AKRVF 695



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 220/425 (51%), Gaps = 14/425 (3%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  +  + R   +HAH++  G   D      LI  Y + G + ++R++FD   + D
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVH 118
              W  +I  Y  N    E + L+  M+RE +   + I   +V  AC  L +   G  VH
Sbjct: 264 RISWNAMISGYFENGGGLEGLELF-SMMRELSVDPDLITMTTVASACELLDNERLGRGVH 322

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++K  F  D  +  S++  Y   G L++A  VF +M S+DVVSW+++IAS   +    
Sbjct: 323 GYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPF 382

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + ++ +  M  EG+ PD +T++S+  AC  +  L     +H   ++  +     + NS I
Sbjct: 383 KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLI 442

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMI---SCYNRSGWFQKALESFVKMLEVKEEP 295
            MYSKC  + +A   F  I  +   SWT++I      NRS  F+  L  F + ++   +P
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRS--FEALL--FFRQMKESMKP 498

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N +TLI+VL +CA +G L  GK +H   +R G+G +  +L  A+++ Y  CG+       
Sbjct: 499 NSVTLISVLSACARIGALMRGKEIHAHALRTGVGFD-GFLPNAILDMYVRCGRKVPALNQ 557

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            ++  ++++ +WN+L++ YA++G +K A+EL  +M    + PD  +  S L AC   G +
Sbjct: 558 FNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMV 616

Query: 416 QLGLQ 420
             GL+
Sbjct: 617 TEGLE 621



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 1/199 (0%)

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           GN  +A+     M    +E++E  ++  ++ C      ++G  V+  + S      + + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL  M+ + G+L  A  VF  MSER+V SW+ ++  Y   G  ++A +L+ +ML + I+
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           PN  TF ++L  C+    +  GK     +  FG E D+     ++ +  + GDI  A  +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 658 IHSMPFPANGSIWGALLNG 676
              MP     S W A+++G
Sbjct: 256 FDKMPKRDRIS-WNAMISG 273


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/700 (33%), Positives = 398/700 (56%), Gaps = 24/700 (3%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L++  + +N   E++L Y  MI       NF +P++L+A + L D+  G+++H  + 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 123 KCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           K G+  D V +  +++  Y + G      KVFD+++ R+ VSW+S+I+S          L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELC---SLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + F  M+ E VEP   T++S+A AC        L   + +H + LR K +++  + N+ +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLV 239

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY K G L S++      E R   +W  ++S   ++  F +ALE   +M+    EP+  
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ +VL +C+ L  LR GK +H   ++ G   E  ++G AL++ Y  C ++    +V   
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG 359

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQL 417
           + +R I  WN +I+ YA+    +EAL L ++M+ + GL+ +S ++A  + AC   G+   
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419

Query: 418 GLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
              IHG V+K  +D +D FVQ++L+DMYS+ G  ++A  +F +++ + +V WN++I G+ 
Sbjct: 420 KEAIHGFVVKRGLD-RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478

Query: 476 QNGNSLEAINLFHQMYL-----------NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
            +    +A+ + H+M +             L+ + +T +T + +C+ +  L KGK +H  
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 538

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
            I   +  D+ + +AL DMYAKCG LQ +++VFD +  RNV++W+ ++  YGMHG   DA
Sbjct: 539 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDA 598

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVD 643
             + + M+  G+KPNEVTF+++  ACSHSG V EG K ++N  + +GVEP   HYAC+VD
Sbjct: 599 IDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVD 658

Query: 644 LLSRSGDIEGAFKMIHSMP--FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           LL R+G ++ A+++I+ +P  F   G+ W +LL  CRIH  +++ +   + L     N  
Sbjct: 659 LLGRAGRVKEAYQLINLIPRNFDKAGA-WSSLLGACRIHNNLEIGEIAAQNLIQLEPNVA 717

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +Y LL+NIY+  G W +  +VR  M+  G++K PG S I
Sbjct: 718 SHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWI 757



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 307/604 (50%), Gaps = 28/604 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDP-PASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L ++  +L+ +    ++HAH+   G   D    +  L+  Y + G   +   VFD   E 
Sbjct: 99  LLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 158

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG---DLGSGE 115
           +   W  LI        +E ++  +  M+ E    S+F   SV  ACS+      L  G+
Sbjct: 159 NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGK 218

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH   ++ G + +  I  +++  YG+ G L  ++ +      RD+V+W+++++S   N 
Sbjct: 219 QVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNE 277

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLG 234
              E L+    MV EGVEPD  T+ S+  AC  L  LR  + +H + L+   +  +  +G
Sbjct: 278 QFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 337

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-VKE 293
           ++ + MY  C  +LS  R F  +  R    W AMI+ Y ++ + ++AL  F++M E    
Sbjct: 338 SALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGL 397

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N  T+  V+ +C   G   + +++H  ++++G+  +  ++  AL++ Y+  GK+   +
Sbjct: 398 LANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRD-RFVQNALMDMYSRLGKIDIAK 456

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-----------GLMPDSFSV 402
           ++   + +R++++WN +I+ Y      ++AL +L +MQ              L P+S ++
Sbjct: 457 RIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITL 516

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
            + L +C  + +L  G +IH + IK +   D  V S+L+DMY+KCG   ++  +F++I  
Sbjct: 517 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPI 576

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KW 520
           ++V+ WN ++  +  +GNS +AI++   M +  ++ +EVTF++   ACS+ G + +G K 
Sbjct: 577 RNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKI 636

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN---VVSWSAMIDCYGM 577
            ++    YGV         + D+  + G ++ A ++ + +  RN     +WS+++    +
Sbjct: 637 FYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLIN-LIPRNFDKAGAWSSLLGACRI 695

Query: 578 HGQL 581
           H  L
Sbjct: 696 HNNL 699



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 249/520 (47%), Gaps = 27/520 (5%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y +MG L SS+++  +F+  D   W  ++     N  F E++    +M+ E     
Sbjct: 238 LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPD 297

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVF 153
            F   SVL ACS L  L +G+++H   +K G  D++  + ++++  Y     +    +VF
Sbjct: 298 GFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVF 357

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSL 212
           D M  R +  W+++I  Y  N    E L +F  M    G+  +  TM  +  AC    + 
Sbjct: 358 DGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAF 417

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
               +IHG V++R +  D  + N+ + MYS+ G +  A+R F K+E R   +W  +I+ Y
Sbjct: 418 SKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGY 477

Query: 273 NRSGWFQKALESFVKM--LEVKE---------EPNLITLITVLGSCAGLGWLREGKSVHC 321
             S   + AL    KM  LE K          +PN ITL+T+L SCA L  L +GK +H 
Sbjct: 478 VFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 537

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             I+  +  +   +G AL++ YA+CG +    KV   I  RN+++WN+++  Y   G S+
Sbjct: 538 YAIKNNLATDV-AVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQ 596

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS--- 438
           +A+++L  M   G+ P+  +  S  +AC + G +  GL+I  ++     KD  V+ S   
Sbjct: 597 DAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMK----KDYGVEPSSDH 652

Query: 439 ---LIDMYSKCGFKNLAYLLFERIQQK--SVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
              ++D+  + G    AY L   I +       W+S++ G  +  N+LE   +  Q  + 
Sbjct: 653 YACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL-GACRIHNNLEIGEIAAQNLIQ 711

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
                   ++      S+ G   K   V   + + GVRK+
Sbjct: 712 LEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKE 751



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M +  SC  L  L +   +HA+ +   L  D    + L++ YA+ G L+ SR VFD    
Sbjct: 517 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPI 576

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V++  Y  +   +++I +   M+ +    +   + SV  ACS  G +  G K+
Sbjct: 577 RNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKI 636


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/666 (34%), Positives = 362/666 (54%), Gaps = 5/666 (0%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E+++     M+  +  +    Y ++LR C        G +V+  +          +  +
Sbjct: 78  LEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNA 137

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  +  FG L DA  VF KM+ RDV SW+ ++  Y       E L ++H M+   + P+
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+ + C  +  +   + IH HV+R   + D  +GN+ I MY KCGD+ +A   F 
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+ KR   SW AMIS Y  +G   + LE F  M E+  +P+LIT+ TV  +C  L   R 
Sbjct: 258 KMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ VH  +++   G +   +  +LI+ Y+  G++ E E V   +  ++++SW  +I+   
Sbjct: 318 GRGVHGYVVKSEFGGDIS-MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
              +  +A+E    M+  G++PD  ++ S LSAC  +G L LG+++H   IK        
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVI 436

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V +SLIDMYSKC   + A  +F  I  K+VV W S+I G   N  S EA+  F QM    
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ES 495

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ + VT ++ + AC+ IG L +GK +H   +  GV  D ++  A+ DMY +CG    A 
Sbjct: 496 MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPAL 555

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             F+S  +++V +W+ ++  Y   GQ   A  LF +ML+  I P+E+TF+++L ACS SG
Sbjct: 556 NQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            V EG  YFN M+  + + P+L+HYAC+VD+L R+G ++ A+  I  MP   + +IWGAL
Sbjct: 615 MVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGAL 674

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           LN CRIH+ +++ +   K +        GYY LL N+YA  GNWD+  KVRS+M   GL 
Sbjct: 675 LNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLS 734

Query: 734 KVPGYS 739
             PG S
Sbjct: 735 ADPGCS 740



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 189/597 (31%), Positives = 316/597 (52%), Gaps = 41/597 (6%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  +   G+L  +  VF    E D F W VL+  Y     F+E++ LYH+M+  +   +
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            + +PSVL+ C+ + D+  G+++H  +I+ GF+ D  +  +++  Y + G + +AR +FD
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KM  RD +SW+++I+ YF+N    EGL++F  M    V+PD +TM ++A AC  L + R 
Sbjct: 258 KMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R +HG+V++ +   D  + NS I MYS  G L  AE  F ++E +   SWTAMI+    
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377

Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
                KA+E++ KM+E++   P+ ITL++VL +CA +G L  G  +H   I+ G+   + 
Sbjct: 378 HKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL-VSHV 435

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  +LI+ Y++C  +    +V   I  +N++SW  LI        S EAL    QM+  
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE- 494

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
            + P+S ++ S LSAC  +G+L  G +IH H ++     D F+ ++++DMY +CG K  A
Sbjct: 495 SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
              F   Q+K V  WN ++ G+ Q G +  A+ LF +M    +  DE+TF++ + ACS  
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G + +G      L  + + K+ Y  T                         N+  ++ ++
Sbjct: 614 GMVTEG------LEYFNIMKNKYNLTP------------------------NLKHYACVV 643

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           D  G  GQL+DA    + M    I+P+   +  +L AC    +VE G+    A R+F
Sbjct: 644 DILGRAGQLDDAYDFIQDM---PIRPDAAIWGALLNACRIHRNVELGEIA--AKRVF 695



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 220/425 (51%), Gaps = 14/425 (3%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  +  + R   +HAH++  G   D      LI  Y + G + ++R++FD   + D
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVH 118
              W  +I  Y  N    E + L+  M+RE +   + I   +V  AC  L +   G  VH
Sbjct: 264 RISWNAMISGYFENGGGLEGLELF-SMMRELSVDPDLITMTTVASACELLDNERLGRGVH 322

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++K  F  D  +  S++  Y   G L++A  VF +M S+DVVSW+++IAS   +    
Sbjct: 323 GYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPF 382

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + ++ +  M  EG+ PD +T++S+  AC  +  L     +H   ++  +     + NS I
Sbjct: 383 KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLI 442

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMI---SCYNRSGWFQKALESFVKMLEVKEEP 295
            MYSKC  + +A   F  I  +   SWT++I      NRS  F+  L  F + ++   +P
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRS--FEALL--FFRQMKESMKP 498

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N +TLI+VL +CA +G L  GK +H   +R G+G +  +L  A+++ Y  CG+       
Sbjct: 499 NSVTLISVLSACARIGALMRGKEIHAHALRTGVGFD-GFLPNAILDMYVRCGRKVPALNQ 557

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            ++  ++++ +WN+L++ YA++G +K A+EL  +M    + PD  +  S L AC   G +
Sbjct: 558 FNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMV 616

Query: 416 QLGLQ 420
             GL+
Sbjct: 617 TEGLE 621



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 1/199 (0%)

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           GN  +A+     M    +E++E  ++  ++ C      ++G  V+  + S      + + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL  M+ + G+L  A  VF  MSER+V SW+ ++  Y   G  ++A +L+ +ML + I+
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           PN  TF ++L  C+    +  GK     +  FG E D+     ++ +  + GDI  A  +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 658 IHSMPFPANGSIWGALLNG 676
              MP     S W A+++G
Sbjct: 256 FDKMPKRDRIS-WNAMISG 273


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 245/710 (34%), Positives = 392/710 (55%), Gaps = 33/710 (4%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W   ++    +N F E+I  Y +M    A   NF +P+VL+A S L DL +GE++H   +
Sbjct: 60  WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119

Query: 123 KCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           K G+    V +  +++  YG+ G + D  KVFD++T RD VSW+S IA+        + L
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQAL 179

Query: 182 KMFHSMVREGVEPDFVTMLSLAEAC---GELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + F +M  E +E    T++S+A AC   G +  LR  + +HG+ LR   +      N+ +
Sbjct: 180 EAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQ-KTFTNNALM 238

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G +  ++  F     R   SW  MIS +++S  F +AL  F  M+    E + +
Sbjct: 239 AMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGV 298

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ +VL +C+ L  L  GK +H  ++R     E  ++G AL++ Y  C ++    +V   
Sbjct: 299 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 358

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQL 417
           I  R I  WN +IS YAR G+ ++AL L ++M +  GL+P++ ++AS + AC +  +   
Sbjct: 359 ILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSN 418

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
              IHG+ +K+  K D +VQ++L+DMYS+ G  +++  +F+ ++ +  V WN+MI G+  
Sbjct: 419 KESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVL 478

Query: 477 NGNSLEAINLFHQMYL-----------------NCLEMDEVTFLTAIQACSNIGQLEKGK 519
           +G    A+ L H+M                      + + +T +T +  C+ +  + KGK
Sbjct: 479 SGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGK 538

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
            +H   I   +  DI + +AL DMYAKCG L  ++RVF+ M  +NV++W+ +I   GMHG
Sbjct: 539 EIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHG 598

Query: 580 QLNDAASLFKQMLDSG-----IKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEP 633
           +  +A  LFK M+         KPNEVTF+ +  ACSHSG + EG   F  M+   GVEP
Sbjct: 599 KGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEP 658

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALLNGCRIHKRIDVMKTIEK 691
              HYAC+VDLL R+G +E A++++++MP  F   G+ W +LL  CRIH+ +++ +   K
Sbjct: 659 TSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGA-WSSLLGACRIHQNVELGEVAAK 717

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            L     N   +Y LLSNIY+  G W++  +VR  M   G+KK PG S I
Sbjct: 718 NLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWI 767



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/599 (28%), Positives = 293/599 (48%), Gaps = 35/599 (5%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           +  L+  Y + G +     VFD   + D   W   I        +E+++  +  M  E  
Sbjct: 131 ANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENM 190

Query: 92  TISNFIYPSVLRACSSLG---DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
            +S+F   SV  ACS+LG    L  G+++HG  ++ G D+      +++  Y + G +DD
Sbjct: 191 ELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDD 249

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           ++ +F+    RD+VSW+++I+S+  +   SE L  F  MV EGVE D VT+ S+  AC  
Sbjct: 250 SKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 309

Query: 209 LCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           L  L   + IH +VLR    I+   +G++ + MY  C  + S  R F  I  R    W A
Sbjct: 310 LERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNA 369

Query: 268 MISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           MIS Y R+G  +KAL  F++M++V    PN  T+ +V+ +C         +S+H   ++ 
Sbjct: 370 MISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKL 429

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G   E  Y+  AL++ Y+  GKM   E +  ++  R+ +SWN +I+ Y   G    AL L
Sbjct: 430 GF-KEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVL 488

Query: 387 LVQMQTW-----------------GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-I 428
           L +MQ                      P++ ++ + L  C  + ++  G +IH + I+ +
Sbjct: 489 LHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNM 548

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              D  V S+L+DMY+KCG  NL+  +F  +  K+V+ WN +I     +G   EA+ LF 
Sbjct: 549 LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFK 608

Query: 489 QMYLNC-----LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTD 542
            M          + +EVTF+T   ACS+ G + +G  + +++   +GV         + D
Sbjct: 609 NMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVD 668

Query: 543 MYAKCGDLQTAQRVFDSMSER--NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           +  + G L+ A  + ++M      V +WS+++    +H  +       K +L   ++PN
Sbjct: 669 LLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH--LEPN 725



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 268/550 (48%), Gaps = 29/550 (5%)

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           SR   SW   + S   + D  E +  +  M   G  PD     ++ +A   L  L+    
Sbjct: 54  SRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQ 113

Query: 218 IHGHVLRRKIKIDG-PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           IH   ++         + N+ + MY KCG +    + F +I  R   SW + I+   R  
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFE 173

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG---WLREGKSVHCQIIRKGMGPEYD 333
            +++ALE+F  M     E +  TL++V  +C+ LG    LR GK +H   +R  +G +  
Sbjct: 174 KWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR--VGDQKT 231

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +   AL+  YA+ G++ + + +  +  +R+++SWN +IS +++     EAL     M   
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNL 451
           G+  D  ++AS L AC ++  L +G +IH +V++ +   ++ FV S+L+DMY  C     
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACS 510
              +F+ I  + + +WN+MI G+ +NG   +A+ LF +M  +  L  +  T  + + AC 
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           +       + +H   +  G ++D Y+  AL DMY++ G +  ++ +FDSM  R+ VSW+ 
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNT 471

Query: 571 MIDCYGMHGQLNDAASLFKQM-----------------LDSGIKPNEVTFMNILWACSHS 613
           MI  Y + G+ ++A  L  +M                      KPN +T M +L  C+  
Sbjct: 472 MITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAAL 531

Query: 614 GSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
            ++ +GK  +  A+R   +  D+   + +VD+ ++ G +  + ++ + MP   N   W  
Sbjct: 532 AAIAKGKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNV 589

Query: 673 LLNGCRIHKR 682
           L+  C +H +
Sbjct: 590 LIMACGMHGK 599



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 250/528 (47%), Gaps = 54/528 (10%)

Query: 6   SCTNL------RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +C+NL      R   +LH + L  G       +  L+  YA++G +  S+ +F++F + D
Sbjct: 203 ACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRD 261

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  ++ F E++  +  M+ E   +      SVL ACS L  L  G+++H 
Sbjct: 262 MVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHA 321

Query: 120 RIIKCGFDKDDVIQTSILCT-----YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
            +++     +D+I+ S + +     Y     ++  R+VFD +  R +  W+++I+ Y  N
Sbjct: 322 YVLR----NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 377

Query: 175 ADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
               + L +F  M++  G+ P+  TM S+  AC    +     SIHG+ ++   K D  +
Sbjct: 378 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYV 437

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N+ + MYS+ G +  +E  F  +E R   SW  MI+ Y  SG +  AL    +M  ++ 
Sbjct: 438 QNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMEN 497

Query: 294 -----------------EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
                            +PN ITL+TVL  CA L  + +GK +H   IR  +  +   +G
Sbjct: 498 TKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDIT-VG 556

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-- 394
            AL++ YA+CG ++   +V + +  +N+++WN+LI      G  +EALEL   M      
Sbjct: 557 SALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGR 616

Query: 395 ---LMPDSFSVASSLSACGNVGSLQLGLQI-----HGHVIKIDCKDEFVQSSLIDMYSKC 446
                P+  +  +  +AC + G +  GL +     H H ++    D +  + ++D+  + 
Sbjct: 617 GGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE-PTSDHY--ACVVDLLGRA 673

Query: 447 GFKNLAYLLFERIQQK--SVVMWNSMI--CGFYQNGN--SLEAINLFH 488
           G    AY L   +  +   V  W+S++  C  +QN     + A NL H
Sbjct: 674 GQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH 721



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 108/228 (47%), Gaps = 22/228 (9%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MP    C        +H + +  G   D      L++ Y+ MG +  S  +FD+ +  D 
Sbjct: 407 MPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDR 466

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATI-----------------SNFIYPSVLR 103
             W  +I  Y+ +  +  +++L H+M R + T                  +     +VL 
Sbjct: 467 VSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLP 526

Query: 104 ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
            C++L  +  G+++H   I+     D  + ++++  Y + GCL+ +R+VF++M +++V++
Sbjct: 527 GCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVIT 586

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREG-----VEPDFVTMLSLAEAC 206
           W+ +I +   +    E L++F +MV E       +P+ VT +++  AC
Sbjct: 587 WNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 634


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/739 (32%), Positives = 388/739 (52%), Gaps = 9/739 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           + +  +L +   +HAHLL +GL         L+  Y++     S+R VFD   +P    W
Sbjct: 14  YAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSW 71

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           + L+  Y  N    +++  +  M       + F+ P VL+ C+   D G G ++H   + 
Sbjct: 72  SSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAP--DAGFGTQLHALAMA 128

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLK 182
            G   D  +  +++  YG FG +D+AR VFD+    R+ VSW+ ++++Y  N   S  +K
Sbjct: 129 TGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVK 188

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  MV  GV+P+      +  AC     L   R +H  V+R     D    N+ + MYS
Sbjct: 189 VFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYS 248

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           K GD+  A   F K+ +    SW A IS     G  Q ALE  ++M      PN+ TL +
Sbjct: 249 KLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +CAG G    G+ +H  +++     + +Y+   L++ YA+ G + + +KV   I +R
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSD-NYIAFGLVDMYAKHGLLDDAKKVFDWIPQR 367

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++ WN LIS  +      EAL L  +M+  G   +  ++A+ L +  ++ ++    Q+H
Sbjct: 368 DLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVH 427

Query: 423 GHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
               K+    D  V + LID Y KC   N AY +FE+     ++ + SMI    Q  +  
Sbjct: 428 ALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGE 487

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           +AI LF +M    L+ D     + + AC+++   E+GK VH  LI      D++   AL 
Sbjct: 488 DAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALV 547

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
             YAKCG ++ A   F  + E+ VVSWSAMI     HG    A  +F +M+D  I PN +
Sbjct: 548 YTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHI 607

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           T  ++L AC+H+G V+E K YFN+M+ +FG+E   +HYACM+DLL R+G ++ A ++++S
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNS 667

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MPF  N ++WGALL   R+H+  ++ +   ++L +     +G + LL+N YA  G WD+ 
Sbjct: 668 MPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDV 727

Query: 721 GKVRSIMEVTGLKKVPGYS 739
            KVR +M+ + +KK P  S
Sbjct: 728 AKVRKLMKDSKVKKEPAMS 746


>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
 gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/738 (31%), Positives = 396/738 (53%), Gaps = 55/738 (7%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L+ L + HA ++ TG   +   S++LI  YA      SS  VFD+  + D+F+W  +IK 
Sbjct: 45  LQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKS 104

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDK 128
           +  N  + ++   Y +M  +    + F  P ++  C+ L  L  G+ +HG + K G F +
Sbjct: 105 HFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAE 164

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  + +S +  Y + G ++DA  +FD++  RDVVSW++++  Y  N D  +GL+    M 
Sbjct: 165 NSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMR 224

Query: 189 REGVEPDFVTMLSLA---EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           R G + + V   +L    +ACG L ++   R +HG  ++  +     + +S + MYSKCG
Sbjct: 225 RIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCG 284

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           ++  A  +F ++  +   SWT++I    R G+  + L  F  M      P+ I +  +L 
Sbjct: 285 NVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILL 344

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
                  +REGK+ H  I+R+    + D +  AL+  Y + G ++  EK+   + E +  
Sbjct: 345 GFGNSMMVREGKAFHGLIVRRNYVLD-DTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKE 403

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN ++  Y                                              +H ++
Sbjct: 404 SWNTMVFGY----------------------------------------------VHCYI 417

Query: 426 IK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           IK  +D +D  + +SLIDMY K G  ++A+ +F R Q + VV WN++I  +  +G+  EA
Sbjct: 418 IKNSVD-EDVSIANSLIDMYGKGGNLSIAWKMFCRTQ-RDVVTWNTLISSYTHSGHYAEA 475

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           I LF +M    L  +  T +  + AC ++  LEKGK VH  +   G   ++ + TAL DM
Sbjct: 476 ITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDM 535

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG L+ ++ +F+SM E++V+SW+ MI  YG+HG  N A  +F+QM  S +KPN +TF
Sbjct: 536 YAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITF 595

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           +++L AC+H+G V+EGK  F+ M+ + ++P+L+H+ACM DLL RSG+++ A  ++ SMP 
Sbjct: 596 LSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPI 655

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
             +G +WG LL+ C+IH  I++   + K    +   ++GYY +LSN+Y   G WDE  + 
Sbjct: 656 CPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERA 715

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R +M+  G+ K  G+S +
Sbjct: 716 RELMKERGIGKRAGWSAV 733



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 5/204 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C +L  L +   +H ++   G   +    T L++ YA+ G L  SR +F++ KE D
Sbjct: 497 VLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKD 556

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W V+I  Y  +     ++ ++ +M +     +   + S+L AC+  G +  G+++  
Sbjct: 557 VISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFD 616

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVS 178
           R+       +      +    G  G L +A  +   M    D   W +++++   + ++ 
Sbjct: 617 RMQYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIE 676

Query: 179 EGLKMFHSMVREGVEPD-FVTMLS 201
            G+++    +    E D +  MLS
Sbjct: 677 IGIRVAKCAIESDPENDGYYIMLS 700


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/732 (32%), Positives = 391/732 (53%), Gaps = 5/732 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++HA  +  G          LI+ Y + G L S++ VFD  ++ DS  W  ++     
Sbjct: 189 VEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQ 248

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           +   EE++LL+ +M       + +I+ SVL AC+ +     GE++HG ++K GF  +  +
Sbjct: 249 SGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYV 308

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y   G    A +VF+ M  RD VS++S+I+         + L++F  M  + +
Sbjct: 309 CNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD VT+ SL  AC  + +L   +  H + ++  +  D  L  + + +Y KC D+ +A  
Sbjct: 369 KPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHE 428

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F+  E      W  M+  Y       ++ + F +M     EPN  T  ++L +C+ L  
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488

Query: 313 LREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
           +  G+ +H Q+++ G   +++ Y+   LI+ YA+ GK+    K+   + E++++SW  +I
Sbjct: 489 VDLGEQIHTQVLKTGF--QFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMI 546

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           + YA+     EAL L  +MQ  G+  D+   AS++SAC  + +L  G QIH         
Sbjct: 547 AGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYS 606

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           D+  V ++L+ +Y++CG    AY  F++I  K  + WNS+I GF Q+G+  EA++LF QM
Sbjct: 607 DDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQM 666

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
                E++  TF  A+ A +N+  ++ GK +H  +I  G   +  +   L  +YAKCG++
Sbjct: 667 SKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNI 726

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+R F  M E+N +SW+AM+  Y  HG    A SLF+ M   G+ PN VTF+ +L AC
Sbjct: 727 DDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSAC 786

Query: 611 SHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           SH G V+EG  YF +MR + G+ P  +HYAC+VDLL RSG +  A + +  MP   +  +
Sbjct: 787 SHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMV 846

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
              LL+ C +HK ID+ +     L      D+  Y LLSN+YA  G W    + R +M+ 
Sbjct: 847 CRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKD 906

Query: 730 TGLKKVPGYSTI 741
            G+KK PG S I
Sbjct: 907 RGVKKEPGRSWI 918



 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 190/669 (28%), Positives = 338/669 (50%), Gaps = 6/669 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH  +L  G   +     RL++ Y   G L  +  VFD         W  ++  ++   
Sbjct: 89  KLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGK 148

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGFDKDDVI 132
                + L+ +M++E+       Y  VLR C   GD+     EK+H R I  G++    +
Sbjct: 149 MAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFV 207

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++  Y + G L+ A+KVFD +  RD VSW ++++    +    E + +F  M   GV
Sbjct: 208 CNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGV 267

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P      S+  AC ++   +    +HG VL++   ++  + N+ + +YS+ G+ + AE+
Sbjct: 268 YPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  + +R   S+ ++IS  ++ G+  KALE F KM     +P+ +T+ ++L +C+ +G 
Sbjct: 328 VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGA 387

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  GK  H   I+ GM  +   L  AL++ Y +C  +    +   +    N++ WN+++ 
Sbjct: 388 LLVGKQFHSYAIKAGMSSDI-ILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLV 446

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y       E+ ++  QMQ  G+ P+ F+  S L  C ++ ++ LG QIH  V+K   + 
Sbjct: 447 AYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQF 506

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           + +V S LIDMY+K G  + A  +F R+++K VV W +MI G+ Q+    EA+NLF +M 
Sbjct: 507 NVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQ 566

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              +  D + F +AI AC+ I  L +G+ +H +    G   D+ +  AL  +YA+CG ++
Sbjct: 567 DQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVR 626

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A   FD +  ++ +SW+++I  +   G   +A SLF QM  +G + N  TF   + A +
Sbjct: 627 DAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAA 686

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +  +V+ GK     +   G + + +    ++ L ++ G+I+ A +    MP   N   W 
Sbjct: 687 NVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWN 745

Query: 672 ALLNGCRIH 680
           A+L G   H
Sbjct: 746 AMLTGYSQH 754



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 182/626 (29%), Positives = 321/626 (51%), Gaps = 4/626 (0%)

Query: 80  ILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCT 139
           I   H M       ++  Y  +L  C S G    G K+HG+I+K GF  + V+   ++  
Sbjct: 53  INFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDL 112

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           Y  FG LD A  VFD+M  R +  W+ ++  +         L +F  M++E V+PD  T 
Sbjct: 113 YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTY 172

Query: 200 LSLAEAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
             +   C G          IH   +    +    + N  I +Y K G L SA++ F  ++
Sbjct: 173 AGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ 232

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
           KR + SW AM+S  ++SG  ++A+  F +M      P      +VL +C  + + + G+ 
Sbjct: 233 KRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQ 292

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +H  ++++G   E  Y+  AL+  Y+  G     E+V +A+ +R+ +S+N LIS  +++G
Sbjct: 293 LHGLVLKQGFSLE-TYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQG 351

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQS 437
            S +ALEL  +M    L PD  +VAS LSAC +VG+L +G Q H + IK     D  ++ 
Sbjct: 352 YSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEG 411

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           +L+D+Y KC     A+  F   + ++VV+WN M+  +    N  E+  +F QM +  +E 
Sbjct: 412 ALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           ++ T+ + ++ CS++  ++ G+ +H +++  G + ++Y+ + L DMYAK G L  A ++F
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIF 531

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             + E++VVSW+AMI  Y  H +  +A +LFK+M D GI  + + F + + AC+   ++ 
Sbjct: 532 RRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALN 591

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           +G+       + G   DL     +V L +R G +  A+     + F  +   W +L++G 
Sbjct: 592 QGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISGF 650

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGY 703
                 +   ++  ++S  G   N +
Sbjct: 651 AQSGHCEEALSLFSQMSKAGQEINSF 676



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 264/534 (49%), Gaps = 4/534 (0%)

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
           +Y ++   + G+   H M   GV  +  T L L + C           +HG +L+     
Sbjct: 42  AYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCA 101

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           +  L    + +Y   GDL  A   F ++  R  + W  ++  +       + L  F +ML
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161

Query: 290 EVKEEPNLITLITVLGSCAGLGW-LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
           + K +P+  T   VL  C G        + +H + I  G         P LI+ Y + G 
Sbjct: 162 QEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNP-LIDLYFKNGF 220

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           ++  +KV   + +R+ +SW  ++S  ++ G  +EA+ L  QM T G+ P  +  +S LSA
Sbjct: 221 LNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C  V   ++G Q+HG V+K     E +V ++L+ +YS+ G    A  +F  + Q+  V +
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSY 340

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           NS+I G  Q G S +A+ LF +M L+CL+ D VT  + + ACS++G L  GK  H   I 
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIK 400

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            G+  DI ++ AL D+Y KC D++TA   F S    NVV W+ M+  YG+   LN++  +
Sbjct: 401 AGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKI 460

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
           F QM   GI+PN+ T+ +IL  CS   +V+ G+     +   G + ++   + ++D+ ++
Sbjct: 461 FTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 520

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
            G ++ A K+   +    +   W A++ G   H++      + KE+   G + +
Sbjct: 521 LGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSD 573



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 245/480 (51%), Gaps = 20/480 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+++  L    + H++ +  G+  D      L++ Y +   ++++   F + +  +
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             +W V++  Y   +   ES  ++ +M  E    + F YPS+LR CSSL  +  GE++H 
Sbjct: 438 VVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHT 497

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +++K GF  +  + + ++  Y + G LD A K+F ++  +DVVSW+++IA Y  +   +E
Sbjct: 498 QVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAE 557

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M  +G+  D +   S   AC  + +L   + IH          D  +GN+ + 
Sbjct: 558 ALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVS 617

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y++CG +  A   F KI  +   SW ++IS + +SG  ++AL  F +M +  +E N  T
Sbjct: 618 LYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFT 677

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
               + + A +  ++ GK +H  II+ G   E + +   LI  YA+CG + + E+    +
Sbjct: 678 FGPAVSAAANVANVKLGKQIHAMIIKTGHDSETE-VSNVLITLYAKCGNIDDAERQFFEM 736

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+N +SWN +++ Y++ G   +AL L   M+  G++P+  +    LSAC +VG +  G+
Sbjct: 737 PEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGI 796

Query: 420 -------QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
                  ++HG V K +       + ++D+  + G  + A     R  ++  +  ++M+C
Sbjct: 797 KYFQSMREVHGLVPKPEH-----YACVVDLLGRSGLLSRA----RRFVEEMPIQPDAMVC 847


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/728 (32%), Positives = 401/728 (55%), Gaps = 25/728 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           L + L  + L Y P   T+   SY ++  L SSR + + F E      A+ + C   N+ 
Sbjct: 93  LFSKLSFSSLAYAPALETK---SYMDV-ELDSSRKIVE-FCEVGDLKNAMELLCSSQNSN 147

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F+                    Y S+L+ C+    +  G +V   I   G   D ++   
Sbjct: 148 FDLGA-----------------YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVK 190

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L + R VFDK++   +  W+ +I+ Y  + +  E + +F  M+  G++P+
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 250

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+ +    +  +   R +HG + +        + NS I  Y     +  A++ F 
Sbjct: 251 SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 310

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++  R   SW +MIS Y ++G   + +E F+KML    + +L T++ V  +CA +G L  
Sbjct: 311 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 370

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +H   I+             L++ Y++CG ++   +V   + E+ ++SW  +I+ Y 
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYV 430

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           R+G+S  A++L  +M++ G++PD ++V S L+AC   G+L+ G  +H ++ + + + + F
Sbjct: 431 REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF 490

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V ++L DMY+KCG    A+ +F  +++K V+ WN+MI G+ +N    EA+ LF +M    
Sbjct: 491 VSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES 550

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
            + D  T    + AC+++  L+KG+ +H   +  G  +D Y+  A+ DMY KCG L  A+
Sbjct: 551 -KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLAR 609

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +FD +  +++VSW+ MI  YGMHG  ++A + F QM  +GI+P+EV+F++IL+ACSHSG
Sbjct: 610 SLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSG 669

Query: 615 SVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            ++EG   FN M+    +EP+L+HYACMVDLL+R+G++  A K I +MP   + +IWGAL
Sbjct: 670 LLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGAL 729

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L GCRIH  + + + + + +      + GYY LL+NIYAE   W+E  K+R  +   GLK
Sbjct: 730 LCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLK 789

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 790 KNPGCSWI 797



 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 192/636 (30%), Positives = 333/636 (52%), Gaps = 47/636 (7%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           ++R   R+ + +  +G+  D     +L+  Y + G L+  R+VFD   E   F+W ++I 
Sbjct: 165 SIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMIS 224

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  +  + ESI L+ +M+      +++ + S+L+  +++  +  G +VHG I K GF+ 
Sbjct: 225 EYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNS 284

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
            + +  S++  Y     +  A+K+FD++T RDV+SW+S+I+ Y  N     G+++F  M+
Sbjct: 285 YNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKML 344

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGH-----VLRRKIKIDGPLGNSFIVMYSK 243
             GV+ D  TM+++  AC  + +L   + +H +      L R+++ +    N+ + MYSK
Sbjct: 345 VFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFN----NTLLDMYSK 400

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CGDL SA R F +++++   SWT+MI+ Y R G    A++ F +M      P++  + ++
Sbjct: 401 CGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSI 460

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CA  G L+ GK VH   IR+       ++  AL + YA+CG M +   V   + +++
Sbjct: 461 LNACAINGNLKSGKIVH-DYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SWN +I  Y +  +  EAL L  +MQ     PD  +VA  L AC ++ +L  G +IHG
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHG 578

Query: 424 HVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           + ++    +D++V ++++DMY KCG   LA  LF+ I  K +V W  MI G+  +G   E
Sbjct: 579 YALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSE 638

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           AIN F+QM +  +E DEV+F++ + ACS+ G L++G W    ++    +K+  I      
Sbjct: 639 AINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEG-WKIFNIM----KKECQI------ 687

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
                              E N+  ++ M+D     G L  A    K M    IKP+   
Sbjct: 688 -------------------EPNLEHYACMVDLLARTGNLVKAHKFIKAM---PIKPDATI 725

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY 638
           +  +L  C     V+  +    A RIF +EP+   Y
Sbjct: 726 WGALLCGCRIHHDVKLAEKV--AERIFELEPENTGY 759



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 230/475 (48%), Gaps = 8/475 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +   + +  ++H  +   G +        LI  Y     +R ++ +FD   + D   W
Sbjct: 261 FAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISW 320

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y+ N   +  I ++ KM+     I      +V  AC+++G L  G+ +H   IK
Sbjct: 321 NSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIK 380

Query: 124 CG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
               D++     ++L  Y + G L+ A +VF++M  + VVSW+S+I  Y         +K
Sbjct: 381 AATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIK 440

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M   GV PD   + S+  AC    +L+  + +H ++    ++ +  + N+   MY+
Sbjct: 441 LFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYA 500

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG +  A   F  ++K+   SW  MI  Y ++    +AL  F +M + + +P+  T+  
Sbjct: 501 KCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVAC 559

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +CA L  L +G+ +H   +R G   E  Y+  A+++ Y +CG +     +   I  +
Sbjct: 560 ILPACASLAALDKGREIHGYALRNGY-SEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNK 618

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++SW ++I+ Y   G   EA+    QM+  G+ PD  S  S L AC + G L  G +I 
Sbjct: 619 DLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIF 678

Query: 423 GHVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICG 473
            +++K +C+ E      + ++D+ ++ G    A+   + +  K    +W +++CG
Sbjct: 679 -NIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCG 732



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 177/367 (48%), Gaps = 17/367 (4%)

Query: 3   LFRSCTNLRKL---TRLHAH-LLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           +F +C N+  L     LH++ +    L  +   +  L++ Y++ G L S+  VF+   E 
Sbjct: 358 VFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK 417

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
               W  +I  Y+     + +I L+ +M         +   S+L AC+  G+L SG+ VH
Sbjct: 418 TVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVH 477

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I +   + +  +  ++   Y + G + DA  VF  M  +DV+SW+++I  Y  N+  +
Sbjct: 478 DYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPN 537

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L +F  M RE  +PD  T+  +  AC  L +L   R IHG+ LR     D  + N+ +
Sbjct: 538 EALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVV 596

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG L+ A   F  I  +   SWT MI+ Y   G+  +A+ +F +M     EP+ +
Sbjct: 597 DMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEV 656

Query: 299 TLITVLGSCAGLGWLREGKSV------HCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
           + I++L +C+  G L EG  +       CQI      P  ++    +++  A  G + + 
Sbjct: 657 SFISILYACSHSGLLDEGWKIFNIMKKECQI-----EPNLEHYA-CMVDLLARTGNLVKA 710

Query: 353 EKVIHAI 359
            K I A+
Sbjct: 711 HKFIKAM 717



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 51/117 (43%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S   L K   +H + L  G   D   +  +++ Y + G L  +R +FD     D 
Sbjct: 561 LPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDL 620

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             W V+I  Y  + +  E+I  +++M           + S+L ACS  G L  G K+
Sbjct: 621 VSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKI 677


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/735 (32%), Positives = 397/735 (54%), Gaps = 9/735 (1%)

Query: 14  TRLHAHLLVTG-LHYDPP-ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
            ++HAH + TG L  D    +T+L+  Y + G +  +RL+FD       F W  LI  Y+
Sbjct: 78  VQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYL 137

Query: 72  WNNFFEESILLYHKMIREQAT---ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +    E++ +Y  M    A+          SVL+A    GD   G +VHG  +K G D+
Sbjct: 138 SSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDR 197

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
              +  +++  Y + G LD A +VF+ M   RDV SW+S+I+    N    + L +F  M
Sbjct: 198 STFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGM 257

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            R  +  +  T + + + C EL  L   R +H  +L+   +++    N+ +VMY+KCG +
Sbjct: 258 QRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRV 316

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            SA R F +I+++   SW +M+SCY ++G + +A+E   +ML    +P+   ++++  + 
Sbjct: 317 DSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAV 376

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
             LGWL  GK VH   I++ +  +   +G  L++ Y +C  +     V   +  ++ +SW
Sbjct: 377 GHLGWLLNGKEVHAYAIKQRLDSDTQ-VGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISW 435

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
             +I+ YA+     EALE+  + Q  G+  D   + S L AC  + ++ L  Q+H + I+
Sbjct: 436 TTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIR 495

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               D  V++ +ID+Y +CG    +  +FE ++QK +V W SMI  +  +G   EA+ LF
Sbjct: 496 NGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLF 555

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            +M    ++ D V  ++ + A   +  L KGK VH  LI      +  I ++L DMY+ C
Sbjct: 556 AEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGC 615

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G L  A +VF+++  +++V W+AMI+  GMHG    A  LFK+ML +G+ P+ V+F+ +L
Sbjct: 616 GSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALL 675

Query: 608 WACSHSGSVEEGKFYFN-AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           +ACSHS  V EGK Y +  M  + +EP  +HYAC+VDLL RSG  E A++ I SMP    
Sbjct: 676 YACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPK 735

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
             +W +LL  CR+HK  ++       L     ++ G Y L+SN++AE G W+   +VR+ 
Sbjct: 736 SVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRAR 795

Query: 727 MEVTGLKKVPGYSTI 741
           +   GL+K P  S I
Sbjct: 796 ISERGLRKDPACSWI 810



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 49/99 (49%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++L K   +H  L+    H +    + L++ Y+  GSL  +  VF+  K  D  +W  +I
Sbjct: 581 SSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMI 640

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS 106
                +   +++I L+ +M++   T  +  + ++L ACS
Sbjct: 641 NATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACS 679


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/739 (32%), Positives = 398/739 (53%), Gaps = 15/739 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  L   GL      +  LI  Y+  G +  +  VFD+    D+  W  +I     N +
Sbjct: 226 IHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGW 285

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF--------- 126
              ++ L+ KM  +   IS+    SVL AC+ LG    G+ VHG  +K G          
Sbjct: 286 HGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQS 345

Query: 127 -DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMF 184
              D  + + ++  Y + G +  AR+VFD M+S+ +V  W+ I+  Y    +  E L +F
Sbjct: 346 GIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLF 405

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M   G+ PD   +  L +    L   R     HG++++        + N+ I  Y+K 
Sbjct: 406 VQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKS 465

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
             +  A   F ++ ++ T SW ++IS  + +G   +A+E F++M    +E + +TL++VL
Sbjct: 466 NMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVL 525

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +CA   +   G+ VH   ++ G+  E   L  AL++ Y+ C       ++  ++G++N+
Sbjct: 526 PACAQSRYWFAGRVVHGYSVKTGLIGETS-LANALLDMYSNCSDWQSTNQIFRSMGQKNV 584

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SW  +I+ Y R G+  +   LL +M   G+ PD F+V S+L A     SL+ G  +HG+
Sbjct: 585 VSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGY 644

Query: 425 VIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
            I+   +    V ++L++MY KC     A L+F+R+  K V+ WN++I G+ +N    E+
Sbjct: 645 TIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNES 704

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
            +LF  M L     + VT    + A ++I  LE+G+ +H   +  G  +D Y   AL DM
Sbjct: 705 FSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDM 763

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y KCG L  A+ +FD ++++N++SW+ MI  YGMHG    A +LF+QM  SGI+P+  +F
Sbjct: 764 YVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASF 823

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
             IL+AC HSG   EG+ +F AM + + +EP L+HY C+VDLLSR+GD++ A + I SMP
Sbjct: 824 SAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMP 883

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              + SIW +LL+GCRIHK + + + +  ++      + GYY LL+NIYAE   W+   K
Sbjct: 884 IEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKK 943

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +++ +   GL++  GYS I
Sbjct: 944 LKNKIGGRGLRENTGYSWI 962



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 180/601 (29%), Positives = 301/601 (50%), Gaps = 16/601 (2%)

Query: 34  RLIESYAEMGSLRSSRLVFDTF--KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           RL+ +Y + G L  +R VFD    +  D  +W  L+  Y     F+E++ L+ +M     
Sbjct: 141 RLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGV 200

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           +        VL+  SSLG L  GE +HG + K G  +   +  +++  Y   G ++DA +
Sbjct: 201 SPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAAR 260

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VFD M  RD +SW+S+I   F N      + +F  M  +G E   VT+LS+  AC  L  
Sbjct: 261 VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320

Query: 212 LRPARSIHGHVLRRKIK----------IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
               +++HG+ ++  +            D  LG+  + MY KCGD+ SA R F  +  + 
Sbjct: 321 GLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG 380

Query: 262 TTS-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
               W  ++  Y + G F+++L  FV+M E+   P+   +  +L     L   R+G   H
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAH 440

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
             I++ G G +      ALI FYA+   + +   V + +  ++ +SWN +IS  +  G++
Sbjct: 441 GYIVKLGFGAQCAVCN-ALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSL 439
            EA+EL ++M T G   DS ++ S L AC        G  +HG+ +K     E  + ++L
Sbjct: 500 SEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANAL 559

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           +DMYS C        +F  + QK+VV W +MI  + + G   +   L  +M L+ +  D 
Sbjct: 560 LDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDV 619

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
               +A+ A +    L++GK VH   I  G+ K + +  AL +MY KC +++ A+ +FD 
Sbjct: 620 FAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDR 679

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
           ++ ++V+SW+ +I  Y  +   N++ SLF  ML    +PN VT   IL A +   S+E G
Sbjct: 680 VTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERG 738

Query: 620 K 620
           +
Sbjct: 739 R 739



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 175/596 (29%), Positives = 296/596 (49%), Gaps = 18/596 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRI----IKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           Y  V++ C     L + ++ H  I          K  V+   ++  Y + G L +AR VF
Sbjct: 100 YCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVF 159

Query: 154 DKMTSR--DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           D M  +  DV  W+S++++Y    D  E + +F  M   GV PD   +  + +    L S
Sbjct: 160 DGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGS 219

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L     IHG + +  +     + N+ I +YS+CG +  A R F  +  R   SW +MI  
Sbjct: 220 LTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGG 279

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM--- 328
              +GW   A++ F KM     E + +T+++VL +CAGLG+   GK+VH   ++ G+   
Sbjct: 280 CFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWG 339

Query: 329 ------GPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLISEYARKGMSK 381
                 G +   LG  L+  Y +CG M+   +V  A+  + N+  WN+++  YA+ G  +
Sbjct: 340 LDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFE 399

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLI 440
           E+L L VQM   G+ PD  +++  L     +   + GL  HG+++K+    +  V ++LI
Sbjct: 400 ESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALI 459

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
             Y+K      A L+F R+ ++  + WNS+I G   NG + EAI LF +M+    E+D V
Sbjct: 460 SFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSV 519

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T L+ + AC+       G+ VH   +  G+  +  +  AL DMY+ C D Q+  ++F SM
Sbjct: 520 TLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSM 579

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            ++NVVSW+AMI  Y   G  +  A L ++M+  GI+P+     + L A +   S+++GK
Sbjct: 580 GQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGK 639

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                    G+E  L     ++++  +  ++E A ++I       +   W  L+ G
Sbjct: 640 SVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEA-RLIFDRVTNKDVISWNTLIGG 694



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 159/364 (43%), Gaps = 42/364 (11%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    +L++   +H + +  G+    P +  L+E Y +  ++  +RL+FD     D   W
Sbjct: 629 FAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISW 688

Query: 64  AVLIKCYMWNNFFEESILLYHKMI---REQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             LI  Y  NNF  ES  L+  M+   R  A     I P    A +S+  L  G ++H  
Sbjct: 689 NTLIGGYSRNNFPNESFSLFSDMLLQFRPNAVTMTCILP----AAASISSLERGREIHAY 744

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ GF +D     +++  Y + G L  AR +FD++T ++++SW+ +IA Y  +      
Sbjct: 745 ALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHA 804

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G+EPD  +  ++  AC         R      ++++ KI+  L +     
Sbjct: 805 IALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFF-KAMQKEYKIEPKLKH----- 858

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
                                   +T ++   +R+G  ++ALE F++ + +  EP+    
Sbjct: 859 ------------------------YTCIVDLLSRTGDLKEALE-FIESMPI--EPDSSIW 891

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L  C     ++  + V  ++ +  + PE       L   YAE  +    +K+ + IG
Sbjct: 892 VSLLHGCRIHKNVKLAEKVADKVFK--LEPENTGYYVLLANIYAEAERWEAVKKLKNKIG 949

Query: 361 ERNI 364
            R +
Sbjct: 950 GRGL 953



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 33/206 (16%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S ++L +   +HA+ L  G   D  AS  L++ Y + G+L  +R++FD   + + 
Sbjct: 726 LPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNL 785

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W ++I  Y  + F + +I L+ +M           + ++L AC       SG    GR
Sbjct: 786 ISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCH-----SGLAAEGR 840

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
                  K+  I+  +      + C+ D       + SR                D+ E 
Sbjct: 841 RFFKAMQKEYKIEPKL----KHYTCIVD-------LLSR--------------TGDLKEA 875

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC 206
           L+   SM    +EPD    +SL   C
Sbjct: 876 LEFIESMP---IEPDSSIWVSLLHGC 898


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/736 (32%), Positives = 405/736 (55%), Gaps = 11/736 (1%)

Query: 15  RLHAHLLVTG-LHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           ++HAH + TG L+ D     +T+L+  Y   G +  +R +F+       F W  L+  Y+
Sbjct: 78  QVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYL 137

Query: 72  WNNFFEESILLYHKMIREQATIS---NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +    E++ +Y  M    A  S        SVL+AC + GD   G +VHG  +K G DK
Sbjct: 138 SSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDK 197

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             ++  +++  Y + G LD A +VF+  +  +RDV SW+S+++    N    E L +F  
Sbjct: 198 STLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRG 257

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G   +  T +++ + C EL  L   R +H  +L+   +++    N+ +VMY+K G 
Sbjct: 258 MQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGR 316

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + SA R F +I ++   SW +M+SCY ++ ++ +A++ F +ML+   +P+   ++++  +
Sbjct: 317 VDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSA 376

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
              L  L  G+  H   I++ +  +   +G  L++ Y +CG +    KV  ++G R+ +S
Sbjct: 377 LGHLSRLNNGREFHAYAIKQRLHTDLQ-VGNTLMDMYIKCGSIECSAKVFESMGIRDHIS 435

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  +++ +A+     EALE+++++Q  G+M DS  + S L  C  + S+ L  Q+H + I
Sbjct: 436 WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAI 495

Query: 427 KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
           +    D  +++ LID+Y +CG  + +  LF+R+++K +V W SMI     NG    A+ L
Sbjct: 496 RNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFL 555

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F +M    ++ D V  ++ + A + +  L KGK VH  LI      +  + ++L DMY+ 
Sbjct: 556 FTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSG 615

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG +  A RVF+    ++VV W+AMI+  GMHG    A  LFK+ML +G+ P+ V+F+ +
Sbjct: 616 CGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLAL 675

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L+ACSHS  VEEGK Y + M   + ++P  +HYAC+VD+L RSG  E A++ I +MP   
Sbjct: 676 LYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDP 735

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
             ++W ALL  CR+H+   +      +L     ++ G Y L+SN++AE G W+   + R+
Sbjct: 736 KSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRT 795

Query: 726 IMEVTGLKKVPGYSTI 741
            M   GL+K P  S I
Sbjct: 796 RMAERGLRKNPACSWI 811



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 50/99 (50%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++L K  ++H  L+      + P  + L++ Y+  GS+  +  VF+  K  D  +W  +I
Sbjct: 582 SSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMI 641

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS 106
                +   +++I L+ +M++   T  +  + ++L ACS
Sbjct: 642 NATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACS 680


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/744 (30%), Positives = 391/744 (52%), Gaps = 7/744 (0%)

Query: 4   FRSCT-NLRK---LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
            R+C  N R+   +  +HA  +  GL         LI+ Y++ G +  +R VF+     D
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD 107

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  ++  Y  N   EE++ LY +M R     + ++  SVL +C+       G  +H 
Sbjct: 108 NVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHA 167

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +  K GF  +  +  +++  Y   G    A +VF  M  RD V+++++I+ +        
Sbjct: 168 QGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEH 227

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M   G+ PD VT+ SL  AC  L  L+    +H ++ +  I  D  +  S + 
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD 287

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KCGD+ +A   F   ++     W  M+  + +     K+ E F +M      PN  T
Sbjct: 288 LYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFT 347

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L +C     +  G+ +H   ++ G   +  Y+   LI+ Y++ G + +  +V+  +
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDM-YVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++++SW  +I+ Y +    K+AL    +MQ  G+ PD+  +AS++S C  + +++ GL
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 420 QIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH  + +     D  + ++L+++Y++CG    A+  FE I+ K  + WN ++ GF Q+G
Sbjct: 467 QIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSG 526

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA+ +F +M  + ++ +  TF++A+ A +N+ ++++GK +H ++I  G   +  +  
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN 586

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  +Y KCG  + A+  F  MSERN VSW+ +I     HG+  +A  LF QM   GIKP
Sbjct: 587 ALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKP 646

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N+VTF+ +L ACSH G VEEG  YF +M   +G+ P   HYAC++D+  R+G ++ A K 
Sbjct: 647 NDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKF 706

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MP  A+  +W  LL+ C++HK I+V +   K L     +D+  Y LLSN YA    W
Sbjct: 707 IEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKW 766

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
               +VR +M   G++K PG S I
Sbjct: 767 ANRDQVRKMMRDRGVRKEPGRSWI 790



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/622 (26%), Positives = 305/622 (49%), Gaps = 18/622 (2%)

Query: 82  LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK------VHGRIIKCGFDKDDVIQTS 135
           L+    R+   +    +   LRAC      G+G +      +H + +  G  K  ++   
Sbjct: 28  LFADKARQHGGLGPLDFACALRACR-----GNGRRWQVVPEIHAKAVTRGLGKYRIVGNL 82

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +  AR+VF+++++RD VSW ++++ Y  N    E L ++  M R GV P 
Sbjct: 83  LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S+  +C +       R IH    +     +  +GN+ I +Y +CG    AER F 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R T ++  +IS + + G  + ALE F +M      P+ +T+ ++L +CA LG L++
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  +H  + + G+  +Y   G +L++ Y +CG +     + ++    N++ WN+++  + 
Sbjct: 263 GTQLHSYLFKAGISSDYIMEG-SLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           +     ++ EL  QMQ  G+ P+ F+    L  C     + LG QIH   +K   + D +
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V   LIDMYSK G+   A  + E +++K VV W SMI G+ Q+    +A+  F +M    
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  D +   +AI  C+ I  + +G  +H ++   G   D+ I  AL ++YA+CG ++ A 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             F+ +  ++ ++W+ ++  +   G   +A  +F +M  SG+K N  TF++ L A ++  
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            +++GK     +   G   + +    ++ L  + G  E A KM  S     N   W  ++
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA-KMEFSEMSERNEVSWNTII 620

Query: 675 NGCRIHKR----IDVMKTIEKE 692
             C  H R    +D+   ++KE
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKE 642



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 185/375 (49%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+CT  R++    ++H+  + TG   D   S  LI+ Y++ G L  +R V +  KE D
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ +   ++++  + +M +      N    S +  C+ +  +  G ++H 
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI   G+  D  I  +++  Y   G + +A   F+++  +D ++W+ +++ +  +    E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F  M + GV+ +  T +S   A   L  ++  + IH  V++     +  +GN+ I 
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KCG    A+  F ++ +R   SW  +I+  ++ G   +AL+ F +M +   +PN +T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            I VL +C+ +G + EG S    +  + G+ P  D+    +I+ +   G++   +K I  
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA-CVIDIFGRAGQLDRAKKFIEE 709

Query: 359 IG-ERNILSWNMLIS 372
           +    + + W  L+S
Sbjct: 710 MPIAADAMVWRTLLS 724


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/744 (30%), Positives = 391/744 (52%), Gaps = 7/744 (0%)

Query: 4   FRSCT-NLRK---LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
            R+C  N R+   +  +HA  +  GL         LI+ Y++ G +  +R VF+     D
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD 107

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  ++  Y  N   EE++ LY +M R     + ++  SVL +C+       G  +H 
Sbjct: 108 NVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHA 167

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +  K GF  +  +  +++  Y   G    A +VF  M  RD V+++++I+ +        
Sbjct: 168 QGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEH 227

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M   G+ PD VT+ SL  AC  L  L+    +H ++ +  I  D  +  S + 
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD 287

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KCGD+ +A   F   ++     W  M+  + +     K+ E F +M      PN  T
Sbjct: 288 LYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFT 347

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L +C     +  G+ +H   ++ G   +  Y+   LI+ Y++ G + +  +V+  +
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDM-YVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++++SW  +I+ Y +    K+AL    +MQ  G+ PD+  +AS++S C  + +++ GL
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 420 QIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH  + +     D  + ++L+++Y++CG    A+  FE I+ K  + WN ++ GF Q+G
Sbjct: 467 QIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSG 526

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA+ +F +M  + ++ +  TF++A+ A +N+ ++++GK +H ++I  G   +  +  
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN 586

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  +Y KCG  + A+  F  MSERN VSW+ +I     HG+  +A  LF QM   GIKP
Sbjct: 587 ALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKP 646

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N+VTF+ +L ACSH G VEEG  YF +M   +G+ P   HYAC++D+  R+G ++ A K 
Sbjct: 647 NDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKF 706

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MP  A+  +W  LL+ C++HK I+V +   K L     +D+  Y LLSN YA    W
Sbjct: 707 IEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKW 766

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
               +VR +M   G++K PG S I
Sbjct: 767 ANRDQVRKMMRDRGVRKEPGRSWI 790



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/622 (26%), Positives = 305/622 (49%), Gaps = 18/622 (2%)

Query: 82  LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK------VHGRIIKCGFDKDDVIQTS 135
           L+    R+   +    +   LRAC      G+G +      +H + +  G  K  ++   
Sbjct: 28  LFADKARQHGGLGPLDFACALRACR-----GNGRRWQVVPEIHAKAVTRGLGKYRIVGNL 82

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +  AR+VF+++++RD VSW ++++ Y  N    E L ++  M R GV P 
Sbjct: 83  LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S+  +C +       R IH    +     +  +GN+ I +Y +CG    AER F 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R T ++  +IS + + G  + ALE F +M      P+ +T+ ++L +CA LG L++
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  +H  + + G+  +Y   G +L++ Y +CG +     + ++    N++ WN+++  + 
Sbjct: 263 GTQLHSYLFKAGISSDYIMEG-SLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           +     ++ EL  QMQ  G+ P+ F+    L  C     + LG QIH   +K   + D +
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V   LIDMYSK G+   A  + E +++K VV W SMI G+ Q+    +A+  F +M    
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  D +   +AI  C+ I  + +G  +H ++   G   D+ I  AL ++YA+CG ++ A 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             F+ +  ++ ++W+ ++  +   G   +A  +F +M  SG+K N  TF++ L A ++  
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            +++GK     +   G   + +    ++ L  + G  E A KM  S     N   W  ++
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA-KMEFSEMSERNEVSWNTII 620

Query: 675 NGCRIHKR----IDVMKTIEKE 692
             C  H R    +D+   ++KE
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKE 642



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 185/375 (49%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+CT  R++    ++H+  + TG   D   S  LI+ Y++ G L  +R V +  KE D
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ +   ++++  + +M +      N    S +  C+ +  +  G ++H 
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI   G+  D  I  +++  Y   G + +A   F+++  +D ++W+ +++ +  +    E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F  M + GV+ +  T +S   A   L  ++  + IH  V++     +  +GN+ I 
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KCG    A+  F ++ +R   SW  +I+  ++ G   +AL+ F +M +   +PN +T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            I VL +C+ +G + EG S    +  + G+ P  D+    +I+ +   G++   +K I  
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA-CVIDIFGRAGQLDRAKKFIEE 709

Query: 359 IG-ERNILSWNMLIS 372
           +    + + W  L+S
Sbjct: 710 MPIAADAMVWRTLLS 724


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/717 (33%), Positives = 393/717 (54%), Gaps = 8/717 (1%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQ 90
           +TRLI  Y+  G    SRLVFD     + F W  L+  Y+ N  ++E+I  + ++I   +
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE 205

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
               NF +P +++AC+   D+  G+ VHG  +K G   D  +  +++  YG+ G LD+A 
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR--EGVEPDFVTMLSLAEACGE 208
           ++FDKM  ++++SW+S+I  + +N    E  + F S++   +G+ PD  TM++L   C  
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
             ++     IHG  ++  +  +  + N+ I MYSKCG L  A   F KIE +   SW +M
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385

Query: 269 ISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           I  Y+R G+  +  +   KM   +E  E N +T++ +L +C     L   +++H   +R 
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRH 445

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
               + + +  A I  YA+CG +   E V   +  +++ SWN +I  +A+ G   +AL+ 
Sbjct: 446 SFQYK-ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDF 504

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
             +M   G++PD FS+ S L ACG +G LQ G +IHG V++   + + FV  SL+ +Y  
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFH 564

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C         FER+  K+ V WN+M+ G+ QN    EA++LF QM  + LE DE+   + 
Sbjct: 565 CSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASI 624

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + ACS +  L  GK VH   +   + +D ++  +L DMYAK G L  +QR+F+ ++ + V
Sbjct: 625 LGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEV 684

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            SW+ MI  +G+HGQ N A  LF+ M  S  +P+  TF+ +L AC H+G V EG  Y   
Sbjct: 685 ASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQ 744

Query: 626 MR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M+ ++ +EP+L+HYAC++D+L R+G +  A   I+ MP   +  IW +LL+    +  ++
Sbjct: 745 MQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLE 804

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +   ++L     N    Y LLSN+YA  G WD    VR  M+   L+K  G S I
Sbjct: 805 MGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 286/573 (49%), Gaps = 18/573 (3%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++CT   ++     +H   +  GL  D      +I  Y + G L  +  +FD   E +
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSV------LRACSSLGDLGS 113
              W  LI+ +  N F+ E+    ++  R      + + P V      L  CS  G++  
Sbjct: 276 LISWNSLIRGFSENGFWLEA----YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G  +HG  +K G   + ++  +++  Y + GCL +A  +F K+ ++ VVSW+S+I +Y  
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391

Query: 174 NADVSEGLKMFHS--MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
              V E   +     M  E +E + VT+L+L  AC E   L   R++HG+ LR   +   
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + N+FI  Y+KCG L+ AE  F  +  +  +SW A+I  + ++G   KAL+ + +M  +
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P+  +++++L +C  LG L+ GK +H  ++R G+     ++  +L+  Y  C K   
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMN-SFVAVSLLSLYFHCSKPFY 570

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
                  +G++N + WN ++S Y++  +  EAL L  QM + GL PD  ++AS L AC  
Sbjct: 571 GRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 412 VGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           + +L LG ++H   +K    +D FV  SL+DMY+K GF   +  +F R+  K V  WN M
Sbjct: 631 LSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVM 690

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYG 529
           I GF  +G   +A+ LF  M  +  + D  TFL  +QAC + G + +G  ++      Y 
Sbjct: 691 ITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYK 750

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           +  ++     + DM  + G L  A    + M E
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPE 783



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 309/591 (52%), Gaps = 17/591 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRI-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           +L+ C    ++  G K+   + +   F  D V+ T ++  Y   G   ++R VFD++ ++
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSI 218
           ++  W+++++ Y  N    E +  F  ++     +PD  T   L +AC   C +   +S+
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG  ++  + +D  +GN+ I +Y KCG L  A   F K+ ++   SW ++I  ++ +G++
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 279 QKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            +A  +F  +LE  +   P++ T++T+L  C+G G +  G  +H   ++ G+  E   + 
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL-MVC 351

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ--MQTWG 394
            ALI+ Y++CG +SE   +   I  ++++SWN +I  Y+R+G   E  +LL +  M+   
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           +  +  ++ + L AC     L     +HG+ ++   +  E + ++ I  Y+KCG    A 
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE 471

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F  +  KSV  WN++I G  QNG+ ++A++ + +M    +  D+ + ++ + AC  +G
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLG 531

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L+ GK +H  ++  G+  + ++  +L  +Y  C      +  F+ M ++N V W+AM+ 
Sbjct: 532 LLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLS 591

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y  +   N+A SLF+QML  G++P+E+   +IL ACS   ++  GK     +  F ++ 
Sbjct: 592 GYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK----EVHCFALKN 647

Query: 634 DLQH---YAC-MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            L      AC ++D+ ++SG +  + ++ + +      S W  ++ G  +H
Sbjct: 648 SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMITGFGVH 697



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 166/342 (48%), Gaps = 21/342 (6%)

Query: 406 LSACGNVGSLQLGLQIHGHV-IKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKS 463
           L  CG   ++++G ++   + +      +FV  + LI MYS CG+   + L+F+R+  K+
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           +  WN+++ G+ +N    EAI+ F ++  +   + D  TF   I+AC+    +  GK VH
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
              +  G+  D+++  A+  +Y KCG L  A  +FD M E+N++SW+++I  +  +G   
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293

Query: 583 DAASLFKQMLDS--GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
           +A   F+ +L+S  G+ P+  T + +L  CS  G+V+ G          G+  +L     
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNA 353

Query: 641 MVDLLSRSGDIEGA---FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           ++D+ S+ G +  A   F+ I +    +  S+ GA      + +  D+++ +  E  +  
Sbjct: 354 LIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            N+     LL     E              E+  L+ + GYS
Sbjct: 414 VNEVTILNLLPACLEES-------------ELLSLRALHGYS 442


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/718 (32%), Positives = 372/718 (51%), Gaps = 3/718 (0%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H D  +   ++ +YA  G   ++  +F    +PD   W  L+  Y     F +S+ L  +
Sbjct: 67  HRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVE 126

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M R            +L+AC  L DL  G ++H   +K G + D    ++++  YG+   
Sbjct: 127 MARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRS 186

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L+DA + F  M  R+ VSW + IA    N   + GL++F  M R G+        S+  +
Sbjct: 187 LEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRS 246

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C  +  L  AR +H H ++ K   D  +G + + +Y+K   L+ A R F  +      + 
Sbjct: 247 CAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQAC 306

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            AM+    R+G   +AL+ F  M       ++++L  V  +CA +    +G  VHC  I+
Sbjct: 307 NAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK 366

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G   +   +  A+++ Y +C  + E   V   + +R+ +SWN +I+   +    ++ + 
Sbjct: 367 SGFDVDV-CVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIA 425

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
            L +M  +G+ PD F+  S L AC  + SL+ G  +HG  IK     D FV S+++DMY 
Sbjct: 426 YLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYC 485

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  L +RI  + +V WNS+I GF  N  S EA   F +M    ++ D  T+ T
Sbjct: 486 KCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYAT 545

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +  C+N+  +E GK +H ++I   +  D YI + L DMYAKCG++  +  +F+   + +
Sbjct: 546 VLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLD 605

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            VSW+AMI  Y +HGQ  +A  +F++M  + + PN  TF+ +L ACSH G +++G  YF 
Sbjct: 606 FVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFY 665

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            M   + +EP L+H+ACMVD+L RS   + A K I SMP  A+  IW  LL+ C+I + +
Sbjct: 666 LMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDV 725

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +V +T    +     +D+  Y LLSN+YAE G W +  + R +M    LKK PG S I
Sbjct: 726 EVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWI 783



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 165/576 (28%), Positives = 300/576 (52%), Gaps = 7/576 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C  L  L    ++HA  + TGL  D  A + L++ Y +  SL  +   F    E +
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERN 201

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W   I   + N  +   + L+ +M R    +S   Y SV R+C+++  L +  ++H 
Sbjct: 202 SVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHA 261

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK  F  D V+ T+I+  Y +   L DAR+ F  + +  V + ++++         +E
Sbjct: 262 HAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAE 321

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M R G+  D V++  +  AC E+        +H   ++    +D  + N+ + 
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC  L+ A   F ++E+R + SW A+I+   ++  ++  +    +ML    EP+  T
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CAGL  L  G  VH + I+ G+G +  ++   +++ Y +CG ++E +K+   I
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDA-FVSSTVVDMYCKCGMITEAQKLHDRI 500

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G + ++SWN +IS ++    S+EA +   +M   G+ PD F+ A+ L  C N+ +++LG 
Sbjct: 501 GGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGK 560

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG +IK +   DE++ S+L+DMY+KCG    + L+FE+ Q+   V WN+MICG+  +G
Sbjct: 561 QIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHG 620

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
              EA+ +F +M    +  +  TF+  ++ACS++G L+ G ++ +     Y +   +   
Sbjct: 621 QGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHF 680

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
             + D+  +    Q A +   SM  E + V W  ++
Sbjct: 681 ACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLL 716



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 174/682 (25%), Positives = 316/682 (46%), Gaps = 64/682 (9%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L +G+  H R++  GF     +   +L  Y   G    AR VFD M  RD VSW++++ +
Sbjct: 20  LATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTA 79

Query: 171 YFDNADVSEGLKMFHS-------------------------------MVREGVEPDFVTM 199
           Y    D      +F +                               M R GV PD  T+
Sbjct: 80  YAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTL 139

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
             L +ACG L  L     IH   ++  +++D   G++ + MY KC  L  A R F  + +
Sbjct: 140 AVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           R + SW A I+   ++  + + LE FV+M  +    +     +V  SCA +  L   + +
Sbjct: 200 RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQL 259

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
           H   I+     +   +G A+++ YA+   + +  +   ++    + + N ++    R G+
Sbjct: 260 HAHAIKNKFSAD-RVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSS 438
             EAL+L   M   G+  D  S++   SAC  V     GLQ+H   IK     D  V+++
Sbjct: 319 GAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNA 378

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           ++D+Y KC     AYL+F+ ++Q+  V WN++I    QN    + I   ++M    +E D
Sbjct: 379 ILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPD 438

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           + T+ + ++AC+ +  LE G  VH K I  G+  D ++ + + DMY KCG +  AQ++ D
Sbjct: 439 DFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHD 498

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            +  + +VSW+++I  + ++ Q  +A   F +MLD G+KP+  T+  +L  C++  ++E 
Sbjct: 499 RIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIEL 558

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKMIHSMPFPANGSIWGALLN 675
           GK     +    +  D    + +VD+ ++ G++  +   F+    + F +    W A++ 
Sbjct: 559 GKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVS----WNAMIC 614

Query: 676 GCRIHKR-IDVMKTIE------------------KELSVTGTNDNG--YYTLLSNIYAEE 714
           G  +H +  + ++  E                  +  S  G  D+G  Y+ L+++ Y  E
Sbjct: 615 GYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLE 674

Query: 715 GNWDEFGKVRSIMEVTGLKKVP 736
              + F     ++++ G  K P
Sbjct: 675 PQLEHFA---CMVDILGRSKGP 693



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 191/375 (50%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLRK-LTRLHAHLLV--TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F +C  ++  L  L  H L   +G   D      +++ Y +  +L  + LVF   ++ D
Sbjct: 344 VFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRD 403

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I     N  +E++I   ++M+R      +F Y SVL+AC+ L  L  G  VHG
Sbjct: 404 SVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHG 463

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + IK G   D  + ++++  Y + G + +A+K+ D++  +++VSW+SII+ +  N    E
Sbjct: 464 KAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEE 523

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             K F  M+  GV+PD  T  ++ + C  L ++   + IHG ++++++  D  + ++ + 
Sbjct: 524 AQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVD 583

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG++  +   F K +K    SW AMI  Y   G   +ALE F +M +    PN  T
Sbjct: 584 MYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHAT 643

Query: 300 LITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + VL +C+ +G L +G +  +    R  + P+ ++    +++         E  K I +
Sbjct: 644 FVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFA-CMVDILGRSKGPQEALKFIRS 702

Query: 359 IG-ERNILSWNMLIS 372
           +  E + + W  L+S
Sbjct: 703 MPLEADAVIWKTLLS 717



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 160/356 (44%), Gaps = 41/356 (11%)

Query: 307 CAGLG--WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
           CAG G   L  G++ H +++  G  P   ++   L++ YA CG  +    V   +  R+ 
Sbjct: 12  CAGAGRSALATGQAAHARMLVSGFMPT-TFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70

Query: 365 LSWNMLISEYA-------------------------------RKGMSKEALELLVQMQTW 393
           +SWN +++ YA                               ++GM ++++ L V+M   
Sbjct: 71  VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           G+ PD  ++A  L ACG +  L LG+QIH   +K   + D    S+L+DMY KC     A
Sbjct: 131 GVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDA 190

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
              F  + +++ V W + I G  QN      + LF QM    L + +  + +  ++C+ I
Sbjct: 191 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAI 250

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L   + +H   I      D  + TA+ D+YAK   L  A+R F S+    V + +AM+
Sbjct: 251 TCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMM 310

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
                 G   +A  LF+ M  SGI  + V+   +  AC+      E K Y   +++
Sbjct: 311 VGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACA------EVKGYLQGLQV 360



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 83/211 (39%), Gaps = 34/211 (16%)

Query: 500 VTFLTAIQACSNIGQ--LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
            TF    Q C+  G+  L  G+  H +++  G     ++   L  MYA+CG    A+ VF
Sbjct: 3   ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS----------------------- 594
           D M  R+ VSW+ M+  Y   G    AASLF  M D                        
Sbjct: 63  DVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVG 122

Query: 595 --------GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
                   G+ P+  T   +L AC     +  G          G+E D++  + +VD+  
Sbjct: 123 LSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYG 182

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           +   +E A +  H M    N   WGA + GC
Sbjct: 183 KCRSLEDALRFFHGMG-ERNSVSWGAAIAGC 212


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/676 (33%), Positives = 385/676 (56%), Gaps = 9/676 (1%)

Query: 73  NNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           N  + ++I ++ K+I + +    NF +P V++AC+   D G GE +HG +IK G   D  
Sbjct: 8   NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV--R 189
           +  +++  YG+FG +D A KVF  M  R++VSW+SII+ + +N    +   M   M+   
Sbjct: 68  VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGE 127

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           EG+ PD  T++++   C     ++    IHG  ++  +  D  + NS + MYSKCG L  
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCA 308
           A+  F K  ++   SW  MI      G+  +A   F +M ++   E N +T++ +L +C 
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSW 367
            +  LR  K +H   IR G   +YD L     +  YA+CG +   E+V +++  + + SW
Sbjct: 248 EISQLRSLKELHGYSIRHGF--QYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSW 305

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N LI   A+ G  ++AL L +QM   GL+PD F++ S L A  ++ SL+ G ++HG V++
Sbjct: 306 NALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLR 365

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
              + D F+  SL+ +Y  CG  + A LLF+ +++KS V WN+MI G+ QNG   +A+ L
Sbjct: 366 HGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALIL 425

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F ++  +  +  ++  ++ + ACS    L  GK  H   +   + +D+++  +  DMYAK
Sbjct: 426 FRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAK 485

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            G ++ ++ VFD +  +++ SW+A+I  YG+HG   ++  LF++M   G  P+  TF+ I
Sbjct: 486 SGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGI 545

Query: 607 LWACSHSGSVEEGKFYFNAMRIF-GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L  CSH+G VEEG  YFN M+ F G+EP L+HYAC++D+L R+G ++ A +++H MP   
Sbjct: 546 LTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQP 605

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           +  +W +LL+ CR    +++ + + ++L      +   Y  LSN+YA  G WD+  +VR 
Sbjct: 606 DSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQ 665

Query: 726 IMEVTGLKKVPGYSTI 741
           +++  GL+K  G S I
Sbjct: 666 MIKDIGLQKDAGCSWI 681



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 275/565 (48%), Gaps = 51/565 (9%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+     +++   R+H   +  GL  D   +  L++ Y++ G L  ++++FD     ++
Sbjct: 141 LPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNA 200

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             W  +I       +  E+  L+ +M ++E   ++     ++L AC  +  L S +++HG
Sbjct: 201 VSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHG 260

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             I+ GF  D+++    +  Y + G L  A +VF  M ++ V SW+++I     N D  +
Sbjct: 261 YSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRK 320

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L ++  M   G+ PD+ T+ SL  A   L SLR  + +HG VLR  ++ID  +G S + 
Sbjct: 321 ALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLS 380

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y  CG+  SA   F  +E++ + SW AMIS Y+++G  + AL  F K++    +P+ I 
Sbjct: 381 LYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIA 440

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +++VLG+C+    LR GK  HC  + K +  E  ++  + I+ YA+ G + E   V   +
Sbjct: 441 VVSVLGACSQQSALRLGKETHCYAL-KALLMEDVFVACSTIDMYAKSGCIKESRSVFDGL 499

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             +++ SWN +I+ Y   G  +E++EL  +M+  G MPD F+    L+ C + G ++ GL
Sbjct: 500 KNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGL 559

Query: 420 Q-------IHGHVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMI 471
           +        HG    I+ K E   + ++DM  + G   +   L+ E  +Q    +W+S+ 
Sbjct: 560 KYFNEMQNFHG----IEPKLEHY-ACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSL- 613

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
                                             +  C N G+LE G+ V  KL+     
Sbjct: 614 ----------------------------------LSFCRNFGELEIGQIVAEKLLELE-P 638

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRV 556
           K++    +L+++YA  G     +RV
Sbjct: 639 KNVENYVSLSNLYAGSGRWDDVRRV 663


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/663 (33%), Positives = 368/663 (55%), Gaps = 35/663 (5%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           +  + ++   Y S+++ C        G+ +H ++I  G++ D  + T IL  Y   GCLD
Sbjct: 64  KPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123

Query: 148 D---ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
           D   ARK+F++M  R++ +W+++I +Y    D  E   +F  M++ GV PD  T  S   
Sbjct: 124 DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALR 183

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
            CG L S    + +H  ++    K D  +GN+ I MY+KC D  S  + F ++ +R   +
Sbjct: 184 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT 243

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           W ++IS   + G F  AL  F++M E ++  +P+  T  T+L  CA      +G+ +H  
Sbjct: 244 WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 303

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +IR  +      +   L+  Y+ECG+++  +++ + + ERN  SWN +I  Y + G ++E
Sbjct: 304 LIRANITKNI-IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 362

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLID 441
           AL L  QMQ  G+ PD FS++S LS+C ++   Q G ++H  +++   ++E  +Q  L+D
Sbjct: 363 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVD 422

Query: 442 MYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           MY+KCG  + A+ ++++   + ++  +WNS++ G+   G   E+ N F +M  + +E D 
Sbjct: 423 MYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDV 482

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           +T +T +                           + ++TAL DMY+KCG +  A+ VFD+
Sbjct: 483 LTMVTIVNL-------------------------LVLETALVDMYSKCGAITKARTVFDN 517

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
           M+ +N+VSW+AMI  Y  HG   +A  L+++M   G+ PNEVTF+ IL ACSH+G VEEG
Sbjct: 518 MNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEG 577

Query: 620 KFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
              F +M+  + +E   +HY CMVDLL R+G +E A + +  MP     S WGALL  CR
Sbjct: 578 LRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACR 637

Query: 679 IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
           +HK +D+ +   + L      + G Y ++SNIYA  G W E   +R +M++ G+KK PG 
Sbjct: 638 VHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGV 697

Query: 739 STI 741
           S I
Sbjct: 698 SWI 700



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 175/648 (27%), Positives = 309/648 (47%), Gaps = 46/648 (7%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRS---SRLVFDTFK 56
           L + C +     R   +H  ++  G + D    T+++  YA  G L     +R +F+   
Sbjct: 77  LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E +   W  +I  Y   + + E+  ++ +M++      NF + S LR C +L     G++
Sbjct: 137 ERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 196

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VH ++I CGF  D  +  +++  Y +    +   KVFD+M  R+ V+W+SII++      
Sbjct: 197 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 256

Query: 177 VSEGLKMFHSM--VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            ++ L +F  M    +G++PD  T  +L   C    +    R IH H++R  I  +  + 
Sbjct: 257 FNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 316

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
              + MYS+CG L  A+  F ++ +R   SW +MI  Y ++G  Q+AL  F +M     +
Sbjct: 317 TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 376

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+  +L ++L SC  L   ++G+ +H  I+R  M  E   L   L++ YA+CG M    K
Sbjct: 377 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEE-GILQVVLVDMYAKCGSMDYAWK 435

Query: 355 VIHAI--GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
           V       +RN   WN +++ YA KG+ KE+    ++M    +  D  ++ + ++     
Sbjct: 436 VYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLL--- 492

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
                                 ++++L+DMYSKCG    A  +F+ +  K++V WN+MI 
Sbjct: 493 ---------------------VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMIS 531

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVR 531
           G+ ++G S EA+ L+ +M    +  +EVTFL  + ACS+ G +E+G  +   +   Y + 
Sbjct: 532 GYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 591

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN----DAAS 586
                 T + D+  + G L+ A+   + M  E  V +W A++    +H  ++     A  
Sbjct: 592 AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQR 651

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           LF+  LD       V   NI  A      VE+ +     M++ GV+ D
Sbjct: 652 LFE--LDPQNPGPYVIMSNIYAAAGRWKEVEDIR---QMMKMKGVKKD 694


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/627 (34%), Positives = 359/627 (57%), Gaps = 3/627 (0%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +HG+II  G   D  +   ++    +   +D+AR VFDKM  +++++WSS+++ Y     
Sbjct: 71  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 130

Query: 177 VSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
             E L +F  + R+ G  P+   + S+  AC +L  +     +HG V+R     D  +G 
Sbjct: 131 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 190

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S I  YSK G++  A   F ++ ++   +WT +I+ Y + G    +LE F +M E    P
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +   + +VL +C+ L +L  GK +H  ++R+G   +   +   LI+FY +C ++    K+
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN-VLIDFYTKCNRVKAGRKL 309

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  +NI+SW  +IS Y +     EA++L  +M   G  PD F+  S L++CG+  +L
Sbjct: 310 FDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREAL 369

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G Q+H + IK + + DEFV++ LIDMY+K      A  +F+ + +++V+ +N+MI G+
Sbjct: 370 EQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 429

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
                  EA+ LFH+M +   + +E TF   I A SN+  L  G+  H++L+  G+    
Sbjct: 430 SSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCP 489

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           ++  AL DMYAKCG ++ A+++F+S   R+VV W++MI  +  HG+  +A  +F++M+  
Sbjct: 490 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 549

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           GI+PN VTF+ +L ACSH+G VE+G  +FN+M  FG++P  +HYAC+V LL RSG +  A
Sbjct: 550 GIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEA 609

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
            + I  MP      +W +LL+ CRI   +++ K   +    T   D+G Y LLSNI+A +
Sbjct: 610 KEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASK 669

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G W +  KVR  M+ + + K PG S I
Sbjct: 670 GMWADVKKVRDRMDSSEVVKEPGRSWI 696



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 178/636 (27%), Positives = 328/636 (51%), Gaps = 38/636 (5%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++V+GL  D   +  LI   ++   + ++R+VFD     +   W+ ++  Y    +
Sbjct: 71  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 130

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            EE+++++  + R+     N F+  SV+RAC+ LG +  G ++HG +++ GFD+D  + T
Sbjct: 131 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 190

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y + G +++AR VFD+++ +  V+W++IIA Y      +  L++F  M    V P
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D   + S+  AC  L  L   + IH +VLRR  ++D  + N  I  Y+KC  + +  + F
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  +   SWT MIS Y ++ +  +A++ F +M  +  +P+     +VL SC     L 
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH   I+  +  + +++   LI+ YA+   + + +KV   + E+N++S+N +I  Y
Sbjct: 371 QGRQVHAYTIKANLESD-EFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 429

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-E 433
           + +    EALEL  +M+     P+ F+ A+ ++A  N+ SL+ G Q H  ++K+      
Sbjct: 430 SSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCP 489

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           FV ++L+DMY+KCG    A  +F     + VV WNSMI    Q+G + EA+ +F +M   
Sbjct: 490 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 549

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            ++ + VTF+  + ACS+ G++E G    + +  +G++         T+ YA        
Sbjct: 550 GIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPG-------TEHYA-------- 594

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
                            ++   G  G+L +A    ++M    I+P  + + ++L AC  +
Sbjct: 595 ----------------CVVSLLGRSGKLFEAKEFIEKM---PIEPAAIVWRSLLSACRIA 635

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           G+VE GK Y   M I     D   Y  + ++ +  G
Sbjct: 636 GNVELGK-YAAEMAISTDPKDSGSYILLSNIFASKG 670



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 276/568 (48%), Gaps = 40/568 (7%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+CT L    K  +LH  ++ +G   D    T LI+ Y++ G++  +RLVFD   E  
Sbjct: 157 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT 216

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I  Y        S+ L+ +M         ++  SVL ACS L  L  G+++H 
Sbjct: 217 AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 276

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +++ G + D  +   ++  Y +   +   RK+FD+M  ++++SW+++I+ Y  N+   E
Sbjct: 277 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 336

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +K+F  M R G +PD     S+  +CG   +L   R +H + ++  ++ D  + N  I 
Sbjct: 337 AMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLID 396

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K   L+ A++ F  + ++   S+ AMI  Y+      +ALE F +M    ++PN  T
Sbjct: 397 MYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFT 456

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY-DYLGPALIEFYAECGKMSECEKVIHA 358
              ++ + + L  LR G+  H Q+++  MG ++  ++  AL++ YA+CG + E  K+ ++
Sbjct: 457 FAALITAASNLASLRHGQQFHNQLVK--MGLDFCPFVTNALVDMYAKCGSIEEARKMFNS 514

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
              R+++ WN +IS +A+ G ++EAL +  +M   G+ P+  +  + LSAC + G ++ G
Sbjct: 515 SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 574

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           L            + F  +S+     K G ++ A                 ++    ++G
Sbjct: 575 L------------NHF--NSMPGFGIKPGTEHYA----------------CVVSLLGRSG 604

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA     +M    +E   + + + + AC   G +E GK+     IS    KD     
Sbjct: 605 KLFEAKEFIEKM---PIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTD-PKDSGSYI 660

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            L++++A  G     ++V D M    VV
Sbjct: 661 LLSNIFASKGMWADVKKVRDRMDSSEVV 688



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K +H ++I  G++ D ++   L ++ +K   +  A+ VFD M  +N+++WS+M+  Y   
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128

Query: 579 GQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
           G   +A  +F  +   SG  PNE    +++ AC+  G VE+G      +   G + D+  
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 188

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              ++D  S++G+IE A +++           W  ++ G
Sbjct: 189 GTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWTTIIAG 226


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/646 (35%), Positives = 369/646 (57%), Gaps = 4/646 (0%)

Query: 98   YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
            Y SVL+ C+    L  G++VH  II  G   D+ +   ++  Y   G L   RK+FDK+ 
Sbjct: 372  YCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIM 431

Query: 158  SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            +  V  W+ +++ Y    +  E + +F  M + GV  +  T   + +    L  ++  + 
Sbjct: 432  NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491

Query: 218  IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
            +HG+VL+     +  + NS I  Y K G + SA   F ++ +    SW +MI+    +G+
Sbjct: 492  VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551

Query: 278  FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
                LE F++ML +  E +L TL++VL + A +G L  G+++H   ++     E  +   
Sbjct: 552  SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVF-SN 610

Query: 338  ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
             L++ Y++CG ++   +V   +G+  I+SW   I+ Y R+G+  +A+ L  +MQ+ G+ P
Sbjct: 611  TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670

Query: 398  DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
            D ++V S + AC    SL  G  +H +VIK        V ++LI+MY+KCG    A L+F
Sbjct: 671  DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 730

Query: 457  ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             +I  K +V WN+MI G+ QN    EA+ LF  M     + D++T    + AC+ +  L+
Sbjct: 731  SKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALD 789

Query: 517  KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            KG+ +H  ++  G   D+++  AL DMYAKCG L  AQ +FD + +++++SW+ MI  YG
Sbjct: 790  KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 849

Query: 577  MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDL 635
            MHG  N+A S F +M  +GI+P+E +F  IL ACSHSG + EG  +FN+MR   GVEP L
Sbjct: 850  MHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKL 909

Query: 636  QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
            +HYAC+VDLL+R G++  A+K I SMP   + +IWG LL+GCRIH  + + + + + +  
Sbjct: 910  EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE 969

Query: 696  TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               ++  YY +L+N+YAE   W+E  K+R  M+  G K+ PG S I
Sbjct: 970  LEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWI 1015



 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 181/596 (30%), Positives = 312/596 (52%), Gaps = 7/596 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H+ ++  G+  D     +L+  Y   G L   R +FD       F+W +L+  Y    
Sbjct: 390 RVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIG 449

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F ES+ L+ KM +     + + +  VL+  ++LG +   ++VHG ++K GF  +  +  
Sbjct: 450 NFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVN 509

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y +FG ++ A  +FD+++  DVVSW+S+I     N     GL++F  M+  GVE 
Sbjct: 510 SLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV 569

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T++S+  A   + +L   R++HG  ++     +    N+ + MYSKCG+L  A   F
Sbjct: 570 DLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVF 629

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
           VK+      SWT+ I+ Y R G +  A+  F +M      P++ T+ +++ +CA    L 
Sbjct: 630 VKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD 689

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH  +I+ GMG        ALI  YA+CG + E   V   I  ++I+SWN +I  Y
Sbjct: 690 KGRDVHSYVIKNGMGSNLPVTN-ALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGY 748

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
           ++  +  EALEL + MQ     PD  ++A  L AC  + +L  G +IHGH+++     D 
Sbjct: 749 SQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL 807

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V  +L+DMY+KCG   LA LLF+ I +K ++ W  MI G+  +G   EAI+ F++M + 
Sbjct: 808 HVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIA 867

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            +E DE +F   + ACS+ G L +G K+ +      GV   +     + D+ A+ G+L  
Sbjct: 868 GIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSK 927

Query: 553 AQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           A +  +SM  + +   W  ++    +H  +  A  + + + +  ++P+   +  +L
Sbjct: 928 AYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE--LEPDNTRYYVVL 981



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 246/474 (51%), Gaps = 7/474 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +   +++  R+H ++L  G   +      LI +Y + G + S+  +FD   EPD   W
Sbjct: 480 FAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSW 539

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I   + N F    + ++ +M+     +      SVL A +++G+L  G  +HG  +K
Sbjct: 540 NSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVK 599

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F ++ V   ++L  Y + G L+ A +VF KM    +VSW+S IA+Y      S+ + +
Sbjct: 600 ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGL 659

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M  +GV PD  T+ S+  AC    SL   R +H +V++  +  + P+ N+ I MY+K
Sbjct: 660 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 719

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG +  A   F KI  +   SW  MI  Y+++    +ALE F+ M + + +P+ IT+  V
Sbjct: 720 CGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACV 778

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CAGL  L +G+ +H  I+R+G   +  ++  AL++ YA+CG +   + +   I +++
Sbjct: 779 LPACAGLAALDKGREIHGHILRRGYFSDL-HVACALVDMYAKCGLLVLAQLLFDMIPKKD 837

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SW ++I+ Y   G   EA+    +M+  G+ PD  S +  L+AC + G L  G +   
Sbjct: 838 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFF- 896

Query: 424 HVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICG 473
           + ++ +C  E      + ++D+ ++ G  + AY   E +  K    +W  ++ G
Sbjct: 897 NSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 215/425 (50%), Gaps = 5/425 (1%)

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           +F       T +  A I+ +   G  + A+E   K      E  L +  +VL  CA    
Sbjct: 327 SFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTK--SKSYELGLNSYCSVLQLCAEKKS 384

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +GK VH  II  G+  + + LG  L+  Y  CG + +  K+   I    +  WN+L+S
Sbjct: 385 LEDGKRVHSVIISNGISID-EALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 443

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
           EYA+ G  +E++ L  +MQ  G++ + ++    L     +G ++   ++HG+V+K+    
Sbjct: 444 EYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 503

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           +  V +SLI  Y K G    A+ LF+ + +  VV WNSMI G   NG S   + +F QM 
Sbjct: 504 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           +  +E+D  T ++ + A +NIG L  G+ +H   +     +++     L DMY+KCG+L 
Sbjct: 564 ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 623

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A  VF  M +  +VSW++ I  Y   G  +DA  LF +M   G++P+  T  +I+ AC+
Sbjct: 624 GATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 683

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            S S+++G+   + +   G+  +L     ++++ ++ G +E A  +   +P     S W 
Sbjct: 684 CSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS-WN 742

Query: 672 ALLNG 676
            ++ G
Sbjct: 743 TMIGG 747



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 4/197 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       L K   +H H+L  G   D   +  L++ YA+ G L  ++L+FD   + D 
Sbjct: 779 LPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDL 838

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W V+I  Y  + F  E+I  +++M           +  +L ACS  G L  G K    
Sbjct: 839 ISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNS 898

Query: 121 II-KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVS 178
           +  +CG +        ++      G L  A K  + M  + D   W  +++    + DV 
Sbjct: 899 MRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVK 958

Query: 179 EGLKMFHSMVREGVEPD 195
              K+   +    +EPD
Sbjct: 959 LAEKVAEHIFE--LEPD 973


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/730 (31%), Positives = 400/730 (54%), Gaps = 5/730 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +++ GL YD   S  L+ SY ++GS+  +  +FD     +   W+ ++  Y    
Sbjct: 61  KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLG 120

Query: 75  FFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
           + E+++L + +  R     ++ +I  S++RAC        G +VH  +IK GF +D  + 
Sbjct: 121 YNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVG 180

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           TS++  Y + G +D AR VFD +  +  V+W++II  Y  +      L++F+ M+   V 
Sbjct: 181 TSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVI 240

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD   + S+  AC  L  L+  + IH +VLR + K+D    N  I  Y+KCG + + +  
Sbjct: 241 PDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKAL 300

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +++ +   SWT MI+ Y ++ +  +A+E   +M  +  +P+     +VL SC  +  L
Sbjct: 301 FDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDAL 360

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           + G+ +H  +I+  +  E+D ++  ALI+ Y++C  + + ++V   +   +++ +N +I 
Sbjct: 361 QHGRQIHSYVIKVCL--EHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIE 418

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y+R+G    ALE+  +M+   + P   +  S L     +  LQL  QIHG +IK     
Sbjct: 419 GYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSL 478

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D+F  S+LID+YSKC     A  +FE    K +V+WNS+  G+     S EA  L+  + 
Sbjct: 479 DKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQ 538

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L+    +E TF     A S +  L  G+  H++++  G+  D +I  AL DMYAKCG ++
Sbjct: 539 LSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVE 598

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+++F S   ++   W++MI  Y  HG++ +A  +F+ M+ + I PN VTF+++L ACS
Sbjct: 599 EAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACS 658

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           H G VE+G  ++N+M  +G+EP ++HYA +V LL R+G +  A + I  M       +W 
Sbjct: 659 HVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWR 718

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL+ CR+   +++ K   +        D+G Y +LSNI+A +G W +  ++R  M+V G
Sbjct: 719 SLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNG 778

Query: 732 LKKVPGYSTI 741
           + K PG S I
Sbjct: 779 VVKEPGQSWI 788



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 292/573 (50%), Gaps = 3/573 (0%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +++H++++ +G   D    T L+  YA+ G +  +RLVFD         W  +I  Y  +
Sbjct: 162 SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
              E S+ L++ M+        ++  S+L ACS LG L  G+++H  +++     D    
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY 281

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
             ++  Y + G +   + +FD++  ++++SW+++IA Y  N+   E +++   M R G +
Sbjct: 282 NVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWK 341

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD     S+  +CG + +L+  R IH +V++  ++ D  + N+ I MYSKC  L  A+R 
Sbjct: 342 PDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRV 401

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +       + AMI  Y+R G+   ALE F +M      P+ +T +++LG  A L  L
Sbjct: 402 FDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCL 461

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           +  K +H  II+ G   +  +   ALI+ Y++C  + +   V      ++I+ WN L S 
Sbjct: 462 QLSKQIHGLIIKYGFSLD-KFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSG 520

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           Y  +  S+EA +L   +Q     P+ F+ A+  +A   + SL  G Q H  V+K+  + D
Sbjct: 521 YNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESD 580

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            F+ ++L+DMY+KCG    A  +F     K    WNSMI  + Q+G   EA+ +F  M  
Sbjct: 581 PFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVS 640

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           N +  + VTF++ + ACS++G +E G   ++ +  YG+   I    ++  +  + G L  
Sbjct: 641 NNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTE 700

Query: 553 AQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDA 584
           A+   + M+ R   + W +++    + G +  A
Sbjct: 701 AREFIEKMTIRPAALVWRSLLSACRVFGNVELA 733



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 250/490 (51%), Gaps = 4/490 (0%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R +H  V+   ++ D  L N  +  Y K G +  A   F K+  R   SW++++S Y + 
Sbjct: 60  RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119

Query: 276 GWFQKALESFVKMLEV-KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           G+ +KAL  F++      ++ N   L +++ +C        G  VH  +I+ G G +  Y
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDV-Y 178

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G +L+  YA+ G++ +   V   +  +  ++W  +I+ Y + G S+ +L+L   M    
Sbjct: 179 VGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESN 238

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           ++PD + ++S L+AC  +G L+ G QIH +V++ + K D    + LID Y+KCG      
Sbjct: 239 VIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGK 298

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            LF+R+  K+++ W +MI G+ QN    EA+ L  +M+    + DE    + + +C ++ 
Sbjct: 299 ALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVD 358

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L+ G+ +H  +I   +  D ++  AL DMY+KC  L  A+RVFD ++  +VV ++AMI+
Sbjct: 359 ALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIE 418

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y   G L  A  +F++M    + P+ +TF+++L   +    ++  K     +  +G   
Sbjct: 419 GYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSL 478

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           D    + ++D+ S+   I  A + +       +  +W +L +G  +  + +    +  +L
Sbjct: 479 DKFTSSALIDVYSKCSCIRDA-RYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDL 537

Query: 694 SVTGTNDNGY 703
            ++    N +
Sbjct: 538 QLSRERPNEF 547


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/728 (31%), Positives = 381/728 (52%), Gaps = 3/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +V GL  D      LI+ YA+ G +  +R VF      D   W  ++  Y     
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E+  LY +M       + ++  SVL AC+       G  +H ++ K  F  +  +  +
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y  FG    A +VF  M   D V+++++I+ +         L++F  M   G+ PD
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT+ SL  AC  +  L+  + +H ++L+  +  D     S + +Y KCGD+ +A   F 
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN 304

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
             ++     W  M+  Y +     K+ E F +M      PN  T   +L +C   G +  
Sbjct: 305 LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIEL 364

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H   I+ G   +  Y+   LI+ Y++   + +  K++  + +R+++SW  +I+ Y 
Sbjct: 365 GEQIHSLSIKNGFESDM-YVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCKDEF 434
           +    +EAL    +MQ  G+ PD+  +AS+ SAC  + +++ GLQIH  V +     D  
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++L+++Y++CG    A+ LF  I  K  + WN +I GF Q+    +A+ +F +M    
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAG 543

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
            + +  TF++AI A +N+  +++GK VH + +  G   +  +  AL  +Y KCG ++ A+
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F  MS RN VSW+ +I     HG+  +A  LF QM   G+KPN+VTF+ +L ACSH G
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 663

Query: 615 SVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            VEEG  YF +M  ++G+ P   HYAC+VD+L R+G ++ A + +  MP  AN  IW  L
Sbjct: 664 LVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTL 723

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ C++HK I++ +   K L     +D+  Y LLSN YA  G W    +VR +M+  G++
Sbjct: 724 LSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIR 783

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 784 KEPGRSWI 791



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 301/630 (47%), Gaps = 13/630 (2%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H   +  G   D +I   ++  Y + G +  AR+VF +++SRD VSW ++++ Y    
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E  +++  M    V P    + S+  AC +       R IH  V ++    +  +GN
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + I +Y   G    AER F  +      ++  +IS + + G  + AL+ F +M      P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +T+ ++L +CA +G L++GK +H  +++ GM  +Y   G +L++ Y +CG +     +
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEG-SLLDLYVKCGDIETAHDI 302

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            +     N++ WN+++  Y +     ++ E+  QMQ  G+ P+ F+    L  C   G +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           +LG QIH   IK   + D +V   LIDMYSK    + A  + E ++++ VV W SMI G+
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGY 422

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            Q+    EA+  F +M    +  D +   +A  AC+ I  + +G  +H ++   G   DI
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADI 482

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            I   L ++YA+CG  + A  +F  +  ++ ++W+ +I  +G       A  +F +M  +
Sbjct: 483 SIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQA 542

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           G K N  TF++ + A ++   +++GK         G   + +    ++ L  + G IE A
Sbjct: 543 GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDA 602

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKR----IDVMKTIEKE-LSVTGTNDNGYYTLLSN 709
            KMI S     N   W  ++  C  H R    +D+   +++E L        G     S+
Sbjct: 603 -KMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSH 661

Query: 710 I-YAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
           +   EEG        +S+  V GL  +P +
Sbjct: 662 VGLVEEG----LSYFKSMSNVYGLNPIPDH 687



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 266/535 (49%), Gaps = 13/535 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  +L+K  +LH++LL  G+ +D      L++ Y + G + ++  +F+     +  +W +
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNL 316

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  Y   +   +S  ++ +M       + F YP +LR C+  G +  GE++H   IK G
Sbjct: 317 MLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNG 376

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F+ D  +   ++  Y ++ CLD ARK+ + +  RDVVSW+S+IA Y  +    E L  F 
Sbjct: 377 FESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFK 436

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   GV PD + + S A AC  + ++R    IH  V       D  + N+ + +Y++CG
Sbjct: 437 EMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCG 496

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
               A   F +I+ +   +W  +IS + +S  +++AL  F+KM +   + N+ T I+ + 
Sbjct: 497 RSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAIS 556

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           + A L  +++GK VH + ++ G   E + +  ALI  Y +CG + + + +   +  RN +
Sbjct: 557 ALANLADIKQGKQVHGRAVKTGHTSETE-VANALISLYGKCGSIEDAKMIFSEMSLRNEV 615

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN +I+  ++ G   EAL+L  QM+  GL P+  +    L+AC +VG ++ GL     +
Sbjct: 616 SWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSM 675

Query: 426 IKI----DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNG 478
             +       D +  + ++D+  + G  + A    + +    + ++W +++  C  ++N 
Sbjct: 676 SNVYGLNPIPDHY--ACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKN- 732

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             +E   L  +  L     D  +++    A +  G+      V   +   G+RK+
Sbjct: 733 --IEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/669 (33%), Positives = 378/669 (56%), Gaps = 20/669 (2%)

Query: 84  HKMIREQATISNFIY--PS--VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCT 139
           H+    +  I + +Y  PS  +L  C+S+ +L    +    IIK G   + + QT ++  
Sbjct: 62  HRTPSSRTYIPSHVYKHPSAILLELCTSMKEL---HQFIPLIIKNGLYSEHLFQTKLVSL 118

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           + +FG L +A +VF  +  +    + +++  Y  N+ + + +  F  M  +GV P     
Sbjct: 119 FCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNF 178

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF-----IVMYSKCGDLLSAERTF 254
             L + CG+   LR  + IH  ++     ++G   N F     + MY+KC  +  A + F
Sbjct: 179 TYLLKVCGDNADLRKGKEIHCQLI-----VNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R    W  +IS Y ++G+ + ALE  ++M E  + P+ IT++++L + A +G LR
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+S+H   +R G    +  +  AL++ Y++CG +     +   +  + ++SWN +I  Y
Sbjct: 294 IGRSIHGYSMRAGF-ESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGY 352

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
            + G    A+E+  +M    +   + +V  +L AC ++G ++ G  +H  + +++   D 
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDV 412

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V +SLI MYSKC   ++A  +FE +Q K++V WN+MI G+ QNG   EAI+ F +M L 
Sbjct: 413 SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQ 472

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            ++ D  T ++ I A + +  L + KW+H  +I   + K++++ TAL DMYAKCG + TA
Sbjct: 473 NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           +++FD M ER+V +W+AMID YG HG    A  LF++M    IKPNEVTF+ +L ACSHS
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592

Query: 614 GSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G VEEG  YF +M+  +G+EP + HY  MVDLL R+  +  A+  I  MP     S++GA
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGA 652

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           +L  CRIHK +++ +     +     +D GY+ LL+NIYA    WD+  +VR+ ME  G+
Sbjct: 653 MLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712

Query: 733 KKVPGYSTI 741
           +K PG+S +
Sbjct: 713 QKTPGWSVV 721



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 182/637 (28%), Positives = 332/637 (52%), Gaps = 45/637 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   CT++++L +    ++  GL+ +    T+L+  + + GSL  +  VF   ++    +
Sbjct: 83  LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDEL 142

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           +  ++K Y  N+  ++++  + +M  +  +  + NF Y  +L+ C    DL  G+++H +
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTY--LLKVCGDNADLRKGKEIHCQ 200

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I  GF  +    T ++  Y +   +++A K+FD+M  RD+V W++II+ Y  N      
Sbjct: 201 LIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTA 260

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++   M  EG  PD +T++S+  A  ++ SLR  RSIHG+ +R   +    +  + + M
Sbjct: 261 LELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDM 320

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG + +A   F ++  +   SW +MI  Y ++G    A+E F KM++ + E   +T+
Sbjct: 321 YSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTV 380

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  L +CA LG + +G+ VH  + +  +G +   +  +LI  Y++C ++    ++   + 
Sbjct: 381 MGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMN-SLISMYSKCKRVDIAAEIFENLQ 439

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            + ++SWN +I  YA+ G   EA++   +MQ   + PDSF++ S + A   +  L     
Sbjct: 440 HKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKW 499

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IHG VI+  C D+  FV ++L+DMY+KCG  + A  LF+ + ++ V  WN+MI G+  +G
Sbjct: 500 IHGLVIRT-CLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHG 558

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYID 537
               A+ LF +M    ++ +EVTFL  + ACS+ G +E+G         +G ++KD  ++
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEG------FQYFGSMKKDYGLE 612

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            A+                           + AM+D  G   +LN+A    ++M    I+
Sbjct: 613 PAMD-------------------------HYGAMVDLLGRANRLNEAWDFIQKM---PIE 644

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           P    F  +L AC    +VE G+   N  RIF ++PD
Sbjct: 645 PAISVFGAMLGACRIHKNVELGEKAAN--RIFDLDPD 679



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 2/353 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +LR    +H + +  G       ST L++ Y++ GS+ ++RL+FD       
Sbjct: 283 LPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTV 342

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y+ N     ++ ++ KM+ EQ  ++N      L AC+ LGD+  G  VH  
Sbjct: 343 VSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKL 402

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           + +     D  +  S++  Y +   +D A ++F+ +  + +VSW+++I  Y  N  ++E 
Sbjct: 403 LDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEA 462

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +  F  M  + ++PD  TM+S+  A  EL  L  A+ IHG V+R  +  +  +  + + M
Sbjct: 463 IDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDM 522

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A + F  +++R  T+W AMI  Y   G  + ALE F KM +   +PN +T 
Sbjct: 523 YAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTF 582

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSEC 352
           + VL +C+  G + EG      + +  G+ P  D+ G A+++      +++E 
Sbjct: 583 LCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYG-AMVDLLGRANRLNEA 634


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/643 (33%), Positives = 362/643 (56%), Gaps = 6/643 (0%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L  CSSL +L     +   I K G  ++ + QT ++  +  +G +D+A +VF+ +  + 
Sbjct: 43  LLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKL 99

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            V + +++  +   +D+ + LK F  M  + VEP       L + CG+   LR  + IHG
Sbjct: 100 NVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            +++    +D         MY+KC  +  A + F ++ +R   SW  +++ Y+++G  + 
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           ALE    M E   +P+ IT+++VL + + L  +R GK +H   +R G     + +  AL+
Sbjct: 220 ALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN-IATALV 278

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
           + YA+CG +     +   + ERN++SWN +I  Y +    KEA+ +  +M   G+ P   
Sbjct: 279 DMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDV 338

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERI 459
           SV  +L AC ++G L+ G  IH   ++++  ++  V +SLI MY KC   + A  +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           Q +++V WN+MI GF QNG  +EA+N F QM    ++ D  T+++ I A + +      K
Sbjct: 399 QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAK 458

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
           W+H  ++   + K++++ TAL DMYAKCG +  A+ +FD MSER+V +W+AMID YG HG
Sbjct: 459 WIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHY 638
               A  LF++M    I+PN VTF++++ ACSHSG VE G   F+ M+  + +EP + HY
Sbjct: 519 IGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHY 578

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
             MVDLL R+G +  A+  I  MP     +++GA+L  C+IHK ++  + + + L     
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNP 638

Query: 699 NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            D GY+ LL+NIY     W++ G+VR  M   GL+K PG S +
Sbjct: 639 EDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681



 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 172/619 (27%), Positives = 316/619 (51%), Gaps = 16/619 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   C++L++L  +   +   GL+ +    T+L+  +   GS+  +  VF+   +  + +
Sbjct: 43  LLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVL 102

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQA--TISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           +  ++K +   +  ++++  + +M  ++    + NF Y  +L+ C    +L  G+++HG 
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTY--LLKVCGDEAELRVGKEIHGL 160

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K GF  D    T +   Y +   + +ARKVFD+M  RD+VSW++I+A Y  N      
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L+M + M  E ++P F+T++S+  A   L  +R  + IHG+ +R        +  + + M
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDM 280

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L +A   F  + +R   SW +MI  Y ++   ++A+  F KML+   +P  +++
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  L +CA LG L  G+ +H   +   +      +  +LI  Y +C ++     +   + 
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELELDRNVSVVN-SLISMYCKCKEVDTAASMFGKLQ 399

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R I+SWN +I  +A+ G   EAL    QMQ   + PD+F+  S ++A   +        
Sbjct: 400 SRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IHG V++ +C D+  FV ++L+DMY+KCG   +A L+F+ + ++ V  WN+MI G+  +G
Sbjct: 460 IHGVVMR-NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
               A+ LF +M    +  + VTFL+ I ACS+ G +E G K  H    +Y +   +   
Sbjct: 519 IGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHY 578

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            A+ D+  + G L  A      M  +  V+ + AM+    +H  +N A  + +++ +  +
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFE--L 636

Query: 597 KPNE----VTFMNILWACS 611
            P +    V   NI  A S
Sbjct: 637 NPEDGGYHVLLANIYRAAS 655



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 178/352 (50%), Gaps = 2/352 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   +   +R    +H + +  G       +T L++ YA+ GSL+++RL+FD   E + 
Sbjct: 243 LPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNV 302

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y+ N   +E+++++ KM+ E    ++      L AC+ LGDL  G  +H  
Sbjct: 303 VSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++   D++  +  S++  Y +   +D A  +F K+ SR +VSW+++I  +  N    E 
Sbjct: 363 SVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEA 422

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  F  M    V+PD  T +S+  A  EL     A+ IHG V+R  +  +  +  + + M
Sbjct: 423 LNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDM 482

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG ++ A   F  + +R  T+W AMI  Y   G  + ALE F +M +    PN +T 
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTF 542

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           ++V+ +C+  G +  G K  H       + P  D+ G A+++     G+++E
Sbjct: 543 LSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYG-AMVDLLGRAGRLNE 593


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/717 (33%), Positives = 392/717 (54%), Gaps = 8/717 (1%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQ 90
           +TRLI  Y+  G    SRLVFD     + F W  L+  Y+ N  ++E+I  + ++I   +
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE 205

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
               NF +P +++AC+   D+  G+ VHG  +K G   D  +  +++  YG+ G LD+A 
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR--EGVEPDFVTMLSLAEACGE 208
           ++FDKM  ++++SW+S+I  + +N    E  + F S++   +G+ PD  TM++L   C  
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
             ++     IHG  ++  +  +  + N+ I MYSKCG L  A   F KIE +   SW +M
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385

Query: 269 ISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           I  Y+R G+  +  +   KM   +E  E N +T++ +L +C     L   +++H   +R 
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRH 445

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
               + + +  A I  YA+CG +   E V   +  +++ SWN +I  +A+ G   +AL+ 
Sbjct: 446 SFQYK-ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDF 504

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
             +M   G++PD FS+ S L ACG +G LQ G +IHG V++   + + FV  SL+ +Y  
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFH 564

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C         FE +  K+ V WN+M+ G+ QN    EA++LF QM  + LE DE+   + 
Sbjct: 565 CSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASI 624

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + ACS +  L  GK VH   +   + +D ++  +L DMYAK G L  +QR+F+ ++ + V
Sbjct: 625 LGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEV 684

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            SW+ MI  +G+HGQ N A  LF+ M  S  +P+  TF+ +L AC H+G V EG  Y   
Sbjct: 685 ASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQ 744

Query: 626 MR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M+ ++ +EP+L+HYAC++D+L R+G +  A   I+ MP   +  IW +LL+    +  ++
Sbjct: 745 MQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLE 804

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +   ++L     N    Y LLSN+YA  G WD    VR  M+   L+K  G S I
Sbjct: 805 MGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 286/573 (49%), Gaps = 18/573 (3%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++CT   ++     +H   +  GL  D      +I  Y + G L  +  +FD   E +
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSV------LRACSSLGDLGS 113
              W  LI+ +  N F+ E+    ++  R      + + P V      L  CS  G++  
Sbjct: 276 LISWNSLIRGFSENGFWLEA----YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G  +HG  +K G   + ++  +++  Y + GCL +A  +F K+ ++ VVSW+S+I +Y  
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391

Query: 174 NADVSEGLKMFHS--MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
              V E   +     M  E +E + VT+L+L  AC E   L   R++HG+ LR   +   
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + N+FI  Y+KCG L+ AE  F  +  +  +SW A+I  + ++G   KAL+ + +M  +
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P+  +++++L +C  LG L+ GK +H  ++R G+     ++  +L+  Y  C K   
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMN-SFVAVSLLSLYFHCSKPFY 570

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
                  +G++N + WN ++S Y++  +  EAL L  QM + GL PD  ++AS L AC  
Sbjct: 571 GRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 412 VGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           + +L LG ++H   +K    +D FV  SL+DMY+K GF   +  +F R+  K V  WN M
Sbjct: 631 LSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVM 690

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYG 529
           I GF  +G   +A+ LF  M  +  + D  TFL  +QAC + G + +G  ++      Y 
Sbjct: 691 ITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYK 750

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           +  ++     + DM  + G L  A    + M E
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPE 783



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 310/591 (52%), Gaps = 17/591 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRI-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           +L+ C    ++  G K+   + +   F  D V+ T ++  Y   G   ++R VFD++ ++
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSI 218
           ++  W+++++ Y  N    E +  F  ++     +PD  T   L +AC   C +   +S+
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG  ++  + +D  +GN+ I +Y KCG L  A   F K+ ++   SW ++I  ++ +G++
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 279 QKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            +A  +F  +LE  +   P++ T++T+L  C+G G +  G  +H   ++ G+  E   + 
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL-MVC 351

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ--MQTWG 394
            ALI+ Y++CG +SE   +   I  ++++SWN +I  Y+R+G   E  +LL +  M+   
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           +  +  ++ + L AC     L     +HG+ ++   +  E + ++ I  Y+KCG    A 
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE 471

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F  +  KSV  WN++I G  QNG+ ++A++ + +M    +  D+ + ++ + AC  +G
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLG 531

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L+ GK +H  ++  G+  + ++  +L  +Y  C      +  F++M ++N V W+AM+ 
Sbjct: 532 LLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLS 591

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y  +   N+A SLF+QML  G++P+E+   +IL ACS   ++  GK     +  F ++ 
Sbjct: 592 GYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK----EVHCFALKN 647

Query: 634 DLQH---YAC-MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            L      AC ++D+ ++SG +  + ++ + +      S W  ++ G  +H
Sbjct: 648 SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMITGFGVH 697



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 166/342 (48%), Gaps = 21/342 (6%)

Query: 406 LSACGNVGSLQLGLQIHGHV-IKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKS 463
           L  CG   ++++G ++   + +      +FV  + LI MYS CG+   + L+F+R+  K+
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           +  WN+++ G+ +N    EAI+ F ++  +   + D  TF   I+AC+    +  GK VH
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
              +  G+  D+++  A+  +Y KCG L  A  +FD M E+N++SW+++I  +  +G   
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293

Query: 583 DAASLFKQMLDS--GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
           +A   F+ +L+S  G+ P+  T + +L  CS  G+V+ G          G+  +L     
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNA 353

Query: 641 MVDLLSRSGDIEGA---FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           ++D+ S+ G +  A   F+ I +    +  S+ GA      + +  D+++ +  E  +  
Sbjct: 354 LIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            N+     LL     E              E+  L+ + GYS
Sbjct: 414 VNEVTILNLLPACLEES-------------ELLSLRALHGYS 442


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/730 (31%), Positives = 406/730 (55%), Gaps = 4/730 (0%)

Query: 15  RLHAHLLVTGLHYDPP-ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           ++HAH++ +   ++    STRL+  Y + G L  +  +FD       F W  +I  Y+ N
Sbjct: 135 QVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 194

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
                S+ LY +M      +    +P +L+AC  L D   G +VHG  IK G+     + 
Sbjct: 195 GEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVA 254

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            SI+  Y +   L+ AR++FD+M  + DVVSW+S+I++Y  N    E L++F  M +  +
Sbjct: 255 NSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASL 314

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+  T ++  +AC +   ++    IH  VL+    I+  + N+ I MY++ G +  A  
Sbjct: 315 APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAAN 374

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  ++   T SW +M+S + ++G + +AL+ + +M +  ++P+L+ +I+++ + A  G 
Sbjct: 375 IFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGN 434

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              G  +H   ++ G+  +   +G +L++ YA+   M   + +   + +++++SW  +I+
Sbjct: 435 TLNGMQIHAYAMKNGLDSDLQ-VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIA 493

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            +A+ G    ALEL  ++Q  G+  D   ++S L AC  +  +    +IH ++I+    D
Sbjct: 494 GHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSD 553

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             +Q+ ++D+Y +CG  + A  +FE I+ K VV W SMI  +  NG + EA+ LFH M  
Sbjct: 554 LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE 613

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +E D ++ ++ + A +++  L+KGK +H  LI  G   +  + + L DMYA+CG L+ 
Sbjct: 614 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEK 673

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           ++ VF+ +  +++V W++MI+ YGMHG    A  LF++M D  I P+ + F+ +L+ACSH
Sbjct: 674 SRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSH 733

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           SG + EG+ +  +M+  + +EP  +HY C+VDLL R+  +E A++ +  M       +W 
Sbjct: 734 SGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWC 793

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL  C+IH   ++ +   ++L      + G Y L+SN+YA E  W +  +VR  M+ +G
Sbjct: 794 ALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASG 853

Query: 732 LKKVPGYSTI 741
           LKK PG S I
Sbjct: 854 LKKNPGCSWI 863



 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 178/608 (29%), Positives = 325/608 (53%), Gaps = 22/608 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKM 156
           Y SVL  C S   L  G++VH  +I      + V + T ++  YG+ GCL DA K+FD M
Sbjct: 117 YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 176

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             + + +W+++I +Y  N +    L+++  M   G+  D  T   + +ACG L   R   
Sbjct: 177 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGA 236

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWTAMISCYNRS 275
            +HG  ++        + NS + MY+KC DL  A + F ++ EK    SW +MIS Y+ +
Sbjct: 237 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 296

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G   +AL  F +M +    PN  T +  L +C    ++++G  +H  +++        ++
Sbjct: 297 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV-FV 355

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI  YA  GKM E   + + + + + +SWN ++S + + G+  EAL+   +M+  G 
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYL 454
            PD  +V S ++A    G+   G+QIH + +K     +  V +SL+DMY+K  F ++ Y+
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK--FCSMKYM 473

Query: 455 --LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+++  K VV W ++I G  QNG+   A+ LF ++ L  +++D +   + + ACS +
Sbjct: 474 DCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGL 533

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             +   K +H  +I  G+  D+ +   + D+Y +CG++  A R+F+ +  ++VVSW++MI
Sbjct: 534 KLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMI 592

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK--FYFNAMRIFG 630
            CY  +G  N+A  LF  M ++G++P+ ++ ++IL A +   ++++GK    F   + F 
Sbjct: 593 SCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFV 652

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS--IWGALLNGCRIH----KRID 684
           +E  L   + +VD+ +R G +E +  + +   F  N    +W +++N   +H      ID
Sbjct: 653 LEGSLA--STLVDMYARCGTLEKSRNVFN---FIRNKDLVLWTSMINAYGMHGCGRAAID 707

Query: 685 VMKTIEKE 692
           + + +E E
Sbjct: 708 LFRRMEDE 715



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           +K   +H  L+  G   +   ++ L++ YA  G+L  SR VF+  +  D  +W  +I  Y
Sbjct: 637 KKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAY 696

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             +     +I L+ +M  E     +  + +VL ACS  G +  G +
Sbjct: 697 GMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 742


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/710 (33%), Positives = 384/710 (54%), Gaps = 32/710 (4%)

Query: 63   WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
            W  L++    ++ F ++I  Y  M+   A   NF +P+VL+A +++ DL  G+++H  + 
Sbjct: 298  WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357

Query: 123  KCGFDKDD--VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            K G        +  S++  YG+ G L  AR+VFD +  RD VSW+S+IA+     +    
Sbjct: 358  KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417

Query: 181  LKMFHSMVREGVEPDFVTMLSLAEACGEL-CSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M+ E V+P   T++S+A AC  +   +R  + +H + LR    +     N+ + 
Sbjct: 418  LHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVT 476

Query: 240  MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            MY++ G +  A+  F   + +   SW  +IS  +++  F++AL     M+     P+ +T
Sbjct: 477  MYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVT 536

Query: 300  LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            L +VL +C+ L  LR G+ +HC  +R G   E  ++G AL++ Y  C +  +   V   +
Sbjct: 537  LASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGV 596

Query: 360  GERNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLG 418
              R +  WN L++ YAR     +AL L V+M +     P++ + AS L AC         
Sbjct: 597  VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDK 656

Query: 419  LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
              IHG+++K    KD++VQ++L+DMYS+ G   ++  +F R+ ++ +V WN+MI G    
Sbjct: 657  EGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVC 716

Query: 478  GNSLEAINLFHQMYLN------------------CLEMDEVTFLTAIQACSNIGQLEKGK 519
            G   +A+NL H+M                       + + VT +T +  C+ +  L KGK
Sbjct: 717  GRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGK 776

Query: 520  WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
             +H   +   +  D+ + +AL DMYAKCG L  A RVFD M  RNV++W+ +I  YGMHG
Sbjct: 777  EIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHG 836

Query: 580  QLNDAASLFKQMLDSG------IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            +  +A  LF+ M   G      I+PNEVT++ I  ACSHSG V+EG   F+ M+   GVE
Sbjct: 837  KGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVE 896

Query: 633  PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRIDVMKTIEK 691
            P   HYAC+VDLL RSG ++ A+++I++MP   N    W +LL  CRIH+ ++  +   K
Sbjct: 897  PRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAK 956

Query: 692  ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             L V   N   +Y L+SNIY+  G WD+   VR  M+  G++K PG S I
Sbjct: 957  HLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWI 1006



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 258/566 (45%), Gaps = 45/566 (7%)

Query: 6    SCTNLRKLTRL----HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
            +C+++R   RL    HA+ L  G       +  L+  YA +G +  ++ +F  F   D  
Sbjct: 442  ACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLV 500

Query: 62   MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
             W  +I     N+ FEE+++  + MI +          SVL ACS L  L  G ++H   
Sbjct: 501  SWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYA 560

Query: 122  IKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ G   ++  + T+++  Y         R VFD +  R V  W++++A Y  N    + 
Sbjct: 561  LRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQA 620

Query: 181  LKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M+ E    P+  T  S+  AC           IHG++++R    D  + N+ + 
Sbjct: 621  LRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMD 680

Query: 240  MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL---------------ES 284
            MYS+ G +  ++  F ++ KR   SW  MI+     G +  AL               ++
Sbjct: 681  MYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDT 740

Query: 285  FVKMLE---VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
            FV   +   V  +PN +TL+TVL  CA L  L +GK +H   +++ +  +   +G AL++
Sbjct: 741  FVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDV-AVGSALVD 799

Query: 342  FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG------L 395
             YA+CG ++   +V   +  RN+++WN+LI  Y   G  +EALEL   M   G      +
Sbjct: 800  MYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVI 859

Query: 396  MPDSFSVASSLSACGNVGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCGFKNL 451
             P+  +  +  +AC + G +  GL +  H +K    ++ + +   + L+D+  + G    
Sbjct: 860  RPNEVTYIAIFAACSHSGMVDEGLHLF-HTMKASHGVEPRGDHY-ACLVDLLGRSGRVKE 917

Query: 452  AYLLFERIQQ--KSVVMWNSMI--CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
            AY L   +      V  W+S++  C  +Q+    E I   H   L          ++ I 
Sbjct: 918  AYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGE-IAAKHLFVLEPNVASHYVLMSNIY 976

Query: 508  ACSNIGQLEKGKWVHHKLISYGVRKD 533
              S+ G  ++   V  K+   GVRK+
Sbjct: 977  --SSAGLWDQALGVRKKMKEMGVRKE 1000



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 213/434 (49%), Gaps = 9/434 (2%)

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           +E+R  + W  ++     S  F+ A+ ++  ML     P+      VL + A +  L  G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 317 KSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           K +H  + + G  P     +  +L+  Y +CG ++   +V   I +R+ +SWN +I+   
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV-GSLQLGLQIHGHVIKIDCKDEF 434
           R    + +L L   M +  + P SF++ S   AC +V G ++LG Q+H + ++      +
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTY 469

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
             ++L+ MY++ G  N A  LF     K +V WN++I    QN    EA+   + M ++ 
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
           +  D VT  + + ACS + +L  G+ +H + L +  + ++ ++ TAL DMY  C   +  
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEVTFMNILWACSH 612
           + VFD +  R V  W+A++  Y  +   + A  LF +M+ +S   PN  TF ++L AC  
Sbjct: 590 RLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR 649

Query: 613 SG--SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
               S +EG   +   R FG +  +Q+   ++D+ SR G +E + K I       +   W
Sbjct: 650 CKVFSDKEGIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVEIS-KTIFGRMNKRDIVSW 706

Query: 671 GALLNGCRIHKRID 684
             ++ GC +  R D
Sbjct: 707 NTMITGCIVCGRYD 720


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/667 (32%), Positives = 381/667 (57%), Gaps = 11/667 (1%)

Query: 81  LLYHKMIREQATISNFIY--PS--VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
           L +H +  E+A I + +Y  P+  +L  C+S+ +L    ++   +IK G   + + QT +
Sbjct: 32  LPFHTL-SERAHIPSHVYKHPAAVLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKL 87

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  + ++G +++A +VF+ +  +    + +++  Y  N+ +   L     M  + V+P  
Sbjct: 88  VSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV 147

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
                L + CG+   L+  + IHG ++      +       + MY+KC  +  A + F +
Sbjct: 148 YNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDR 207

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           + +R   SW  +I+ ++++G+ +KALE  ++M +  + P+ ITL+TVL + A +G L  G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           KS+H   IR G     + +  AL + Y++CG +     +   + ++ ++SWN ++  Y +
Sbjct: 268 KSIHGYAIRAGFAKLVN-ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFV 435
            G  ++A+ +  +M   G+ P   ++  +L AC ++G L+ G  +H  V +++   D  V
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            +SLI MYSKC   ++A  +F  +  ++ V WN+MI G+ QNG   EA+N F +M    +
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + D  T ++ I A + +      KW+H  +I   + K+I++ TAL DMY+KCG +  A++
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +FD +S+R+V++W+AMID YG HG    A  LF +M    ++PN++T+++++ ACSHSG 
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566

Query: 616 VEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V+EG  +F +M+  +G+EP + HY  MVDLL R+G I+ A+  I +MP     +++GA+L
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 626

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             C+IHK I+V +   K+L     ++ GY+ LL+NIYA    W +  +VR  ME  GLKK
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 686

Query: 735 VPGYSTI 741
            PG S +
Sbjct: 687 TPGCSVV 693



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 178/627 (28%), Positives = 331/627 (52%), Gaps = 18/627 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   CT++++L ++   ++  GL+ +    T+L+  +++ GS+  +  VF+   +    +
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           +  ++K Y  N+  E ++    +M  +  +  + NF Y  +L+ C    DL  G+++HG+
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTY--LLKVCGDNADLKRGKEIHGQ 172

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I   F  +    T ++  Y +   +DDA K+FD+M  RD+VSW++IIA +  N    + 
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++   M  EG  PD +T++++  A  ++  L   +SIHG+ +R        +  +   M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG + +A   F  ++++   SW +M+  Y ++G  +KA+  F KMLE   +P  +T+
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  L +CA LG L  GK VH  + +  +G +   +  +LI  Y++C ++     + + + 
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN-SLISMYSKCKRVDIASDIFNNLN 411

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R  +SWN +I  YA+ G   EAL    +M++ G+ PDSF++ S + A   +   +    
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IHG +I+  C D+  FV ++L+DMYSKCG  ++A  LF+ I  + V+ WN+MI G+  +G
Sbjct: 472 IHGLIIR-SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYI 536
               A++LF +M    +E +++T+L+ I ACS+ G +++G   H K +   YG+   +  
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEG-LRHFKSMKQDYGLEPSMDH 589

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
             A+ D+  + G ++ A    ++M     +  + AM+    +H  +       K++ +  
Sbjct: 590 YGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFE-- 647

Query: 596 IKPNE----VTFMNILWACSHSGSVEE 618
           + P+E    V   NI  + S    V E
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAE 674


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/730 (31%), Positives = 406/730 (55%), Gaps = 4/730 (0%)

Query: 15  RLHAHLLVTGLHYDPP-ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           ++HAH++ +   ++    STRL+  Y + G L  +  +FD       F W  +I  Y+ N
Sbjct: 99  QVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 158

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
                S+ LY +M      +    +P +L+AC  L D   G +VHG  IK G+     + 
Sbjct: 159 GEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVA 218

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            SI+  Y +   L+ AR++FD+M  + DVVSW+S+I++Y  N    E L++F  M +  +
Sbjct: 219 NSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASL 278

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+  T ++  +AC +   ++    IH  VL+    I+  + N+ I MY++ G +  A  
Sbjct: 279 APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAAN 338

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  ++   T SW +M+S + ++G + +AL+ + +M +  ++P+L+ +I+++ + A  G 
Sbjct: 339 IFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGN 398

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              G  +H   ++ G+  +   +G +L++ YA+   M   + +   + +++++SW  +I+
Sbjct: 399 TLHGMQIHAYAMKNGLDSDLQ-VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIA 457

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            +A+ G    ALEL  ++Q  G+  D   ++S L AC  +  +    +IH ++I+    D
Sbjct: 458 GHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSD 517

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             +Q+ ++D+Y +CG  + A  +FE I+ K VV W SMI  +  NG + EA+ LFH M  
Sbjct: 518 LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE 577

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +E D ++ ++ + A +++  L+KGK +H  LI  G   +  + + L DMYA+CG L+ 
Sbjct: 578 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEK 637

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           ++ VF+ +  +++V W++MI+ YGMHG    A  LF++M D  I P+ + F+ +L+ACSH
Sbjct: 638 SRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSH 697

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           SG + EG+ +  +M+  + +EP  +HYAC+VDLL R+  +E A++ +  M       +W 
Sbjct: 698 SGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWC 757

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL  C+IH   ++ +   ++L      + G Y L+SN+Y+ E  W +   VR  M+ +G
Sbjct: 758 ALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASG 817

Query: 732 LKKVPGYSTI 741
           LKK PG S I
Sbjct: 818 LKKNPGCSWI 827



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 178/608 (29%), Positives = 325/608 (53%), Gaps = 22/608 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKM 156
           Y SVL  C S   L  G++VH  +I      + V + T ++  YG+ GCL DA K+FD M
Sbjct: 81  YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 140

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             + + +W+++I +Y  N +    L+++  M   G+  D  T   + +ACG L   R   
Sbjct: 141 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGA 200

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWTAMISCYNRS 275
            +HG  ++        + NS + MY+KC DL  A + F ++ EK    SW +MIS Y+ +
Sbjct: 201 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G   +AL  F +M +    PN  T +  L +C    ++++G  +H  +++        ++
Sbjct: 261 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV-FV 319

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI  YA  GKM E   + + + + + +SWN ++S + + G+  EAL+   +M+  G 
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYL 454
            PD  +V S ++A    G+   G+QIH + +K     +  V +SL+DMY+K  F ++ Y+
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAK--FCSMKYM 437

Query: 455 --LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+++  K VV W ++I G  QNG+   A+ LF ++ L  +++D +   + + ACS +
Sbjct: 438 DCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGL 497

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             +   K +H  +I  G+  D+ +   + D+Y +CG++  A R+F+ +  ++VVSW++MI
Sbjct: 498 KLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMI 556

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK--FYFNAMRIFG 630
            CY  +G  N+A  LF  M ++G++P+ ++ ++IL A +   ++++GK    F   + F 
Sbjct: 557 SCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFV 616

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS--IWGALLNGCRIH----KRID 684
           +E  L   + +VD+ +R G +E +  + +   F  N    +W +++N   +H      ID
Sbjct: 617 LEGSLA--STLVDMYARCGTLEKSRNVFN---FIRNKDLVLWTSMINAYGMHGCGRAAID 671

Query: 685 VMKTIEKE 692
           + + +E E
Sbjct: 672 LFRRMEDE 679



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           +K   +H  L+  G   +   ++ L++ YA  G+L  SR VF+  +  D  +W  +I  Y
Sbjct: 601 KKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAY 660

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             +     +I L+ +M  E     +  + +VL ACS  G +  G +
Sbjct: 661 GMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 706


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/704 (32%), Positives = 370/704 (52%), Gaps = 39/704 (5%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E+I L   + +    +++  Y  V+  C+       G+ VH ++ + G + D  +  S
Sbjct: 37  LREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNS 96

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +F  +  A +VF +MT RDVV+WSS+IA+Y  N   ++    F  M    +EP+
Sbjct: 97  LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T LS+ +AC     L   R IH  V    ++ D  +  + I MYSKCG++  A   F 
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+ +R   SWTA+I    +     +A E + +ML+    PN +T +++L SC     L  
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H  I  +G+  +   +  ALI  Y +C  + E  ++   + +R+++SW+ +I+ YA
Sbjct: 277 GRRIHSHISERGLETDM-IVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYA 335

Query: 376 RKGMS-----KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           + G        E  +LL +M+  G+ P+  +  S L AC   G+L+ G QIH  + K+  
Sbjct: 336 QSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGF 395

Query: 431 K-DEFVQSSLIDMYSKCG--------FKNLA-------------YL----------LFER 458
           + D  +Q+++ +MY+KCG        F  +A             Y+          +F  
Sbjct: 396 ELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSE 455

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  ++VV WN MI G+ QNG+ ++   L   M     + D VT +T ++AC  +  LE+G
Sbjct: 456 MPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG 515

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K VH + +  G+  D  + T+L  MY+KCG +  A+ VFD MS R+ V+W+AM+  YG H
Sbjct: 516 KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQH 575

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQH 637
           G   +A  LFK+ML   + PNE+T   ++ ACS +G V+EG+  F  M+  F + P  QH
Sbjct: 576 GDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQH 635

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           Y CMVDLL R+G ++ A + I SMP   + S+W ALL  C+ H  + + +     +    
Sbjct: 636 YGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELE 695

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +    Y  LSNIYA+ G WD+  KVR +M+  GLKK  G S+I
Sbjct: 696 PSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739



 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 178/620 (28%), Positives = 308/620 (49%), Gaps = 46/620 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  L   G+  D      LI  Y++   + S+  VF      D   W+ +I  Y  NN 
Sbjct: 78  VHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNH 137

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             ++   + +M       +   + S+L+AC++   L  G K+H  +   G + D  + T+
Sbjct: 138 PAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATA 197

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +  A +VF KMT R+VVSW++II +   +  ++E  +++  M++ G+ P+
Sbjct: 198 LITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPN 257

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT +SL  +C    +L   R IH H+  R ++ D  + N+ I MY KC  +  A   F 
Sbjct: 258 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFD 317

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQK-ALESFVKMLE-VKEE---PNLITLITVLGSCAGL 310
           ++ KR   SW+AMI+ Y +SG+  K +++   ++LE ++ E   PN +T +++L +C   
Sbjct: 318 RMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAH 377

Query: 311 GWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGK--------------------- 348
           G L +G+ +H ++ +  +G E D  L  A+   YA+CG                      
Sbjct: 378 GALEQGRQIHAELSK--VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTS 435

Query: 349 ----------MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
                     +S  EKV   +  RN++SWN++I+ YA+ G   +  ELL  M+  G  PD
Sbjct: 436 FLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPD 495

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
             +V + L ACG +  L+ G  +H   +K+  + D  V +SLI MYSKCG    A  +F+
Sbjct: 496 RVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFD 555

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           ++  +  V WN+M+ G+ Q+G+ LEA++LF +M    +  +E+T    I ACS  G +++
Sbjct: 556 KMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQE 615

Query: 518 GKWVHHKL---ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMID 573
           G+ +   +        RK  Y    + D+  + G LQ A+    SM  E ++  W A++ 
Sbjct: 616 GREIFRMMQEDFKMTPRKQHY--GCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLG 673

Query: 574 CYGMHGQLNDAASLFKQMLD 593
               H  +  A      +L+
Sbjct: 674 ACKSHNNVQLAERAAHHILE 693



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 226/460 (49%), Gaps = 40/460 (8%)

Query: 1   MPLFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C N   L K  ++H  +   G+  D   +T LI  Y++ G +  +  VF    E
Sbjct: 161 LSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE 220

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W  +I+    +    E+  LY +M++   + +   + S+L +C++   L  G ++
Sbjct: 221 RNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRI 280

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF----- 172
           H  I + G + D ++  +++  Y +   + +AR++FD+M+ RDV+SWS++IA Y      
Sbjct: 281 HSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYK 340

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           D   + E  ++   M REGV P+ VT +S+  AC    +L   R IH  + +   ++D  
Sbjct: 341 DKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRS 400

Query: 233 LG-------------------------------NSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L                                 SF+ MY KCGDL SAE+ F ++  R 
Sbjct: 401 LQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRN 460

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SW  MI+ Y ++G   K  E    M     +P+ +T+IT+L +C  L  L  GK VH 
Sbjct: 461 VVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHA 520

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           + ++ G+  +   +  +LI  Y++CG+++E   V   +  R+ ++WN +++ Y + G   
Sbjct: 521 EAVKLGLESD-TVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGL 579

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           EA++L  +M    + P+  ++ + +SAC   G +Q G +I
Sbjct: 580 EAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREI 619



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 200/394 (50%), Gaps = 43/394 (10%)

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           + G  +EA++LL  ++  GL+ +S +    +  C      + G  +H  + ++  + D +
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + +SLI+ YSK      A  +F R+  + VV W+SMI  +  N +  +A + F +M    
Sbjct: 93  LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +E + +TFL+ ++AC+N   LEKG+ +H  + + G+  D+ + TAL  MY+KCG++  A 
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            VF  M+ERNVVSW+A+I     H +LN+A  L++QML +GI PN VTF+++L +C+   
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272

Query: 615 SVEEGKFYFNAMRIFGVEPDL-------------------------------QHYACMVD 643
           ++  G+   + +   G+E D+                                 ++ M+ 
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332

Query: 644 LLSRSG-----DIEGAFKMIHSMP----FPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
             ++SG      I+  F+++  M     FP N   + ++L  C  H  ++  + I  ELS
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFP-NKVTFMSILRACTAHGALEQGRQIHAELS 391

Query: 695 VTGTN-DNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
             G   D    T + N+YA+ G+  E  +V S M
Sbjct: 392 KVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/699 (33%), Positives = 393/699 (56%), Gaps = 22/699 (3%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L++  + +N   E++L Y  MI       N+ +P++L+A + L D+  G+++H  + 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 123 KCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           K G+  D V +  +++  Y + G      KVFD+++ R+ VSW+S+I+S          L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELC---SLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + F  M+ E VEP   T++S+  AC  L     L   + +H + LR K +++  + N+ +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY K G L S++        R   +W  ++S   ++    +ALE   +M+    EP+  
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ +VL +C+ L  LR GK +H   ++ G   E  ++G AL++ Y  C ++    +V   
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQL 417
           + +R I  WN +I+ Y++    KEAL L + M+ + GL+ +S ++A  + AC   G+   
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423

Query: 418 GLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
              IHG V+K  +D +D FVQ++L+DMYS+ G  ++A  +F +++ + +V WN+MI G+ 
Sbjct: 424 KEAIHGFVVKRGLD-RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482

Query: 476 QNGNSLEAINLFHQMY-----------LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
            + +  +A+ L H+M               L+ + +T +T + +C+ +  L KGK +H  
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
            I   +  D+ + +AL DMYAKCG LQ +++VFD + ++NV++W+ +I  YGMHG   +A
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVD 643
             L + M+  G+KPNEVTF+++  ACSHSG V+EG   F  M+  +GVEP   HYAC+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662

Query: 644 LLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           LL R+G I+ A+++++ MP   N    W +LL   RIH  +++ +   + L     N   
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +Y LL+NIY+  G WD+  +VR  M+  G++K PG S I
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 305/603 (50%), Gaps = 26/603 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDP-PASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L ++  +L+ +    ++HAH+   G   D    +  L+  Y + G   +   VFD   E 
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG---DLGSGE 115
           +   W  LI        +E ++  +  M+ E    S+F   SV+ ACS+L     L  G+
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH   ++ G + +  I  +++  YG+ G L  ++ +      RD+V+W+++++S   N 
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLG 234
            + E L+    MV EGVEPD  T+ S+  AC  L  LR  + +H + L+   +  +  +G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-VKE 293
           ++ + MY  C  +LS  R F  +  R    W AMI+ Y+++   ++AL  F+ M E    
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N  T+  V+ +C   G     +++H  ++++G+  +  ++   L++ Y+  GK+    
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR-FVQNTLMDMYSRLGKIDIAM 460

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-----------GLMPDSFSV 402
           ++   + +R++++WN +I+ Y      ++AL LL +MQ              L P+S ++
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
            + L +C  + +L  G +IH + IK +   D  V S+L+DMY+KCG   ++  +F++I Q
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K+V+ WN +I  +  +GN  EAI+L   M +  ++ +EVTF++   ACS+ G +++G  +
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640

Query: 522 HHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMH 578
            + +   YGV         + D+  + G ++ A ++ + M        +WS+++    +H
Sbjct: 641 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700

Query: 579 GQL 581
             L
Sbjct: 701 NNL 703



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 277/554 (50%), Gaps = 25/554 (4%)

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           SR    W  ++ S   +  + E +  +  M+  G++PD     +L +A  +L  +   + 
Sbjct: 59  SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 218 IHGHVLRRKIKIDG-PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           IH HV +    +D   + N+ + +Y KCGD  +  + F +I +R   SW ++IS      
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW---LREGKSVHCQIIRKGMGPEYD 333
            ++ ALE+F  ML+   EP+  TL++V+ +C+ L     L  GK VH   +RK  G    
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK--GELNS 236

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++   L+  Y + GK++  + ++ + G R++++WN ++S   +     EALE L +M   
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNL 451
           G+ PD F+++S L AC ++  L+ G ++H + +K    DE  FV S+L+DMY  C     
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACS 510
              +F+ +  + + +WN+MI G+ QN +  EA+ LF  M  +  L  +  T    + AC 
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
             G   + + +H  ++  G+ +D ++   L DMY++ G +  A R+F  M +R++V+W+ 
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476

Query: 571 MIDCYGMHGQLNDAASLFKQMLD-----------SGIKPNEVTFMNILWACSHSGSVEEG 619
           MI  Y       DA  L  +M +             +KPN +T M IL +C+   ++ +G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           K          +  D+   + +VD+ ++ G ++ + K+   +P   N   W  ++    +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGM 595

Query: 680 H----KRIDVMKTI 689
           H    + ID+++ +
Sbjct: 596 HGNGQEAIDLLRMM 609



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 248/519 (47%), Gaps = 25/519 (4%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y ++G L SS+++  +F   D   W  ++     N    E++    +M+ E     
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVF 153
            F   SVL ACS L  L +G+++H   +K G  D++  + ++++  Y     +   R+VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSL 212
           D M  R +  W+++IA Y  N    E L +F  M    G+  +  TM  +  AC    + 
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
               +IHG V++R +  D  + N+ + MYS+ G +  A R F K+E R   +W  MI+ Y
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481

Query: 273 NRSGWFQKALESFVKMLEVKE-----------EPNLITLITVLGSCAGLGWLREGKSVHC 321
             S   + AL    KM  ++            +PN ITL+T+L SCA L  L +GK +H 
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             I+  +  +   +G AL++ YA+CG +    KV   I ++N+++WN++I  Y   G  +
Sbjct: 542 YAIKNNLATDV-AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-----CKDEFVQ 436
           EA++LL  M   G+ P+  +  S  +AC + G +  GL+I  +V+K D       D +  
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHY-- 657

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++D+  + G    AY L   + +       W+S++ G  +  N+LE   +  Q  +  
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL-GASRIHNNLEIGEIAAQNLIQL 716

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
                  ++      S+ G  +K   V   +   GVRK+
Sbjct: 717 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 5/409 (1%)

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
           + R    W  ++    RS   ++A+ ++V M+ +  +P+      +L + A L  +  GK
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H  + + G G +   +   L+  Y +CG      KV   I ERN +SWN LIS     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQLGLQIHGHVIKIDCKDEF 434
              + ALE    M    + P SF++ S ++AC N+     L +G Q+H + ++    + F
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++L+ MY K G    + +L      + +V WN+++    QN   LEA+    +M L  
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTA 553
           +E DE T  + + ACS++  L  GK +H   +  G + ++ ++ +AL DMY  C  + + 
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS-GIKPNEVTFMNILWACSH 612
           +RVFD M +R +  W+AMI  Y  +    +A  LF  M +S G+  N  T   ++ AC  
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           SG+    +     +   G++ D      ++D+ SR G I+ A ++   M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 10/178 (5%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M +  SC  L  L +   +HA+ +   L  D    + L++ YA+ G L+ SR VFD   +
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V+I  Y  +   +E+I L   M+ +    +   + SV  ACS  G +  G ++
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640

Query: 118 HGRIIKC--GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD---VVSWSSIIAS 170
              ++K   G +        ++   G  G + +A ++ + M  RD     +WSS++ +
Sbjct: 641 F-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLLGA 696


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/721 (32%), Positives = 387/721 (53%), Gaps = 9/721 (1%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEP--DSFMWAVLIKCYMWNNFFEESILLYHK 85
           D  A   ++ +Y  +G L  +  +F     P  +   W V+I  +     +EE++  +H+
Sbjct: 148 DQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQ 207

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M +     S     SVL A +SL  L  G  VH   IK GF+    + +S++  YG+   
Sbjct: 208 MSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQM 267

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
            DDAR+VFD ++ ++++ W++++  Y  N  +S  +++F  M+  G+ PD  T  S+   
Sbjct: 268 PDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILST 327

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C     L   R +H  +++++   +  + N+ I MY+K G L  A + F  +  R   SW
Sbjct: 328 CACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISW 387

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            A+I  Y +      A   F +M+     P+ ++L ++L +C  +  L  G+  HC  ++
Sbjct: 388 NAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVK 447

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G+     + G +LI+ Y++CG + +  K   ++ ER+++S N LI+ YA K  +KE++ 
Sbjct: 448 LGLETNL-FAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN-TKESIN 505

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMY 443
           LL +MQ  GL P   + AS +  C     + LGLQIH  ++K  + C  EF+ +SL+ MY
Sbjct: 506 LLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMY 565

Query: 444 SKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
                   A +LF      KS+VMW ++I G  QN  S  A+NL+ +M  N +  D+ TF
Sbjct: 566 MDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATF 625

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-S 561
           +T +QAC+ +  L  G+ +H  +   G   D    +AL DMYAKCGD++++ +VF+ + +
Sbjct: 626 VTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELAT 685

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           +++V+SW++MI  +  +G    A  +F +M  S I P++VTF+ +L ACSH+G V EG+ 
Sbjct: 686 KKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQ 745

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            F+ M   +G+EP + HYACMVDLL R G ++ A + I  +    N  IW  LL  CRIH
Sbjct: 746 IFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIH 805

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
                 +   K+L       +  Y LLSN+YA  GNWDE   +R  M    ++K+PG S 
Sbjct: 806 GDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSW 865

Query: 741 I 741
           I
Sbjct: 866 I 866



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 186/681 (27%), Positives = 329/681 (48%), Gaps = 48/681 (7%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT--FKEPDS 60
           +C  L+ L     +H+ ++ +GL         LI  YA+  SL  +R +F +  F    +
Sbjct: 56  ACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHT 115

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  LI  Y+      E++ ++ KM R  A                             
Sbjct: 116 VSWTALISGYVQAGLPHEALHIFDKM-RNSAV---------------------------- 146

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSIIASYFDNADVS 178
                   D V   ++L  Y   G LDDA ++F +M    R+VV+W+ +I+ +   A   
Sbjct: 147 -------PDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYE 199

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L  FH M + GV+    T+ S+  A   L +L     +H H +++  +    + +S I
Sbjct: 200 EALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLI 259

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KC     A + F  I ++    W AM+  Y+++G+    +E F+ M+     P+  
Sbjct: 260 NMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEF 319

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  ++L +CA   +L  G+ +H  II+K       ++  ALI+ YA+ G + E  K    
Sbjct: 320 TYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNL-FVNNALIDMYAKAGALKEAGKHFEH 378

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R+ +SWN +I  Y ++ +   A  L  +M   G++PD  S+AS LSACGN+  L+ G
Sbjct: 379 MTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAG 438

Query: 419 LQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            Q H   +K+  +   F  SSLIDMYSKCG    A+  +  + ++SVV  N++I G Y  
Sbjct: 439 QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAG-YAL 497

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR-KDIYI 536
            N+ E+INL H+M +  L+  E+TF + I  C    ++  G  +H  ++  G+     ++
Sbjct: 498 KNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFL 557

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
            T+L  MY     L  A  +F   S  +++V W+A+I  +  +   + A +L+++M D+ 
Sbjct: 558 GTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNN 617

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           I P++ TF+ +L AC+   S+ +G+   + +   G + D    + +VD+ ++ GD++ + 
Sbjct: 618 ISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSV 677

Query: 656 KMIHSMPFPANGSIWGALLNG 676
           ++   +    +   W +++ G
Sbjct: 678 QVFEELATKKDVISWNSMIVG 698



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/583 (27%), Positives = 292/583 (50%), Gaps = 6/583 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HAH +  G       ++ LI  Y +      +R VFD   + +  +W  ++  Y  N F
Sbjct: 239 VHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGF 298

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
               + L+  MI        F Y S+L  C+    L  G ++H  IIK  F  +  +  +
Sbjct: 299 LSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNA 358

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L +A K F+ MT RD +SW++II  Y      +    +F  M+ +G+ PD
Sbjct: 359 LIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPD 418

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            V++ S+  ACG +  L   +  H   ++  ++ +   G+S I MYSKCGD+  A +T+ 
Sbjct: 419 EVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYS 478

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +R   S  A+I+ Y      ++++    +M  +  +P+ IT  +++  C G   +  
Sbjct: 479 SMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVIL 537

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEY 374
           G  +HC I+++G+    ++LG +L+  Y +  ++++   +       ++I+ W  LIS +
Sbjct: 538 GLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGH 597

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
            +   S  AL L  +M+   + PD  +  + L AC  + SL  G +IH  +       DE
Sbjct: 598 IQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDE 657

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              S+L+DMY+KCG    +  +FE +  +K V+ WNSMI GF +NG +  A+ +F +M  
Sbjct: 658 LTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQ 717

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQ 551
           +C+  D+VTFL  + ACS+ G + +G+ +   +++ YG+   +     + D+  + G L+
Sbjct: 718 SCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLK 777

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            A+   D +  E N + W+ ++    +HG         K++++
Sbjct: 778 EAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIE 820



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 268/564 (47%), Gaps = 51/564 (9%)

Query: 66  LIKCYMWN-------NFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           L++   WN       ++  E +L  Y   +    +   F +   L AC+ L +L  G  V
Sbjct: 10  LLRVRQWNWRVQGTKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAV 69

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK--MTSRDVVSWSSIIASYFDNA 175
           H  +IK G +     Q +++  Y +   L  AR +F          VSW+++I+ Y    
Sbjct: 70  HSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAG 129

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E L +F  M R    PD V ++++  A                              
Sbjct: 130 LPHEALHIFDKM-RNSAVPDQVALVTVLNA------------------------------ 158

Query: 236 SFIVMYSKCGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
                Y   G L  A + F  + I  R   +W  MIS + ++  +++AL  F +M +   
Sbjct: 159 -----YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGV 213

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           + +  TL +VL + A L  L  G  VH   I++G      Y+  +LI  Y +C    +  
Sbjct: 214 KSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSI-YVASSLINMYGKCQMPDDAR 272

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V  AI ++N++ WN ++  Y++ G     +EL + M + G+ PD F+  S LS C    
Sbjct: 273 QVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFE 332

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L++G Q+H  +IK     + FV ++LIDMY+K G    A   FE +  +  + WN++I 
Sbjct: 333 YLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIV 392

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+ Q      A +LF +M L+ +  DEV+  + + AC NI  LE G+  H   +  G+  
Sbjct: 393 GYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLET 452

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +++  ++L DMY+KCGD++ A + + SM ER+VVS +A+I  Y +     ++ +L  +M 
Sbjct: 453 NLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNT-KESINLLHEMQ 511

Query: 593 DSGIKPNEVTFMNILWACSHSGSV 616
             G+KP+E+TF +++  C  S  V
Sbjct: 512 ILGLKPSEITFASLIDVCKGSAKV 535



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 243/485 (50%), Gaps = 38/485 (7%)

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L+ + S +  G  PD  T      AC +L +L   R++H  V++  ++       + I +
Sbjct: 32  LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91

Query: 241 YSKCGDLLSAERTFVK--IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
           Y+KC  L  A   F         T SWTA+IS Y ++G   +AL  F KM      P+ +
Sbjct: 92  YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRN-SAVPDQV 150

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            L+TVL +   LG L +     CQ+ ++   P                            
Sbjct: 151 ALVTVLNAYISLGKLDDA----CQLFQQMPIP---------------------------- 178

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
              RN+++WN++IS +A+    +EAL    QM   G+     ++AS LSA  ++ +L  G
Sbjct: 179 --IRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHG 236

Query: 419 LQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           L +H H IK   +   +V SSLI+MY KC   + A  +F+ I QK++++WN+M+  + QN
Sbjct: 237 LLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQN 296

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G     + LF  M    +  DE T+ + +  C+    LE G+ +H  +I      +++++
Sbjct: 297 GFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVN 356

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL DMYAK G L+ A + F+ M+ R+ +SW+A+I  Y        A SLF++M+  GI 
Sbjct: 357 NALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIV 416

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+EV+  +IL AC +   +E G+ +       G+E +L   + ++D+ S+ GDI+ A K 
Sbjct: 417 PDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKT 476

Query: 658 IHSMP 662
             SMP
Sbjct: 477 YSSMP 481



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 192/401 (47%), Gaps = 39/401 (9%)

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++ L+ +   +     P+  T    L +CA L  L  G++VH  +I+ G+     +   A
Sbjct: 29  ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGL-ESTSFCQGA 87

Query: 339 LIEFYAECGKMSECEKVIHA---IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
           LI  YA+C  ++ C + I A       + +SW  LIS Y + G+  EAL +  +M+    
Sbjct: 88  LIHLYAKCNSLT-CARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRN-SA 145

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           +PD  ++ + L+A  ++G L    Q+                          F+ +    
Sbjct: 146 VPDQVALVTVLNAYISLGKLDDACQL--------------------------FQQMP--- 176

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
              I  ++VV WN MI G  +  +  EA+  FHQM  + ++    T  + + A +++  L
Sbjct: 177 ---IPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAAL 233

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             G  VH   I  G    IY+ ++L +MY KC     A++VFD++S++N++ W+AM+  Y
Sbjct: 234 NHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVY 293

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
             +G L++   LF  M+  GI P+E T+ +IL  C+    +E G+   +A+       +L
Sbjct: 294 SQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNL 353

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                ++D+ +++G ++ A K    M +  + S W A++ G
Sbjct: 354 FVNNALIDMYAKAGALKEAGKHFEHMTYRDHIS-WNAIIVG 393



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 220/463 (47%), Gaps = 8/463 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH+ ++      +   +  LI+ YA+ G+L+ +   F+     D   W  +I  Y+   
Sbjct: 339 QLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEE 398

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
               +  L+ +MI +          S+L AC ++  L +G++ H   +K G + +    +
Sbjct: 399 VEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGS 458

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y + G + DA K +  M  R VVS +++IA Y    +  E + + H M   G++P
Sbjct: 459 SLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKP 517

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAERT 253
             +T  SL + C     +     IH  +++R +      LG S + MY     L  A   
Sbjct: 518 SEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANIL 577

Query: 254 FVKIEK-RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           F +    +    WTA+IS + ++     AL  + +M +    P+  T +TVL +CA L  
Sbjct: 578 FSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSS 637

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLI 371
           L +G+ +H  I   G   + +    AL++ YA+CG +    +V   +  +++++SWN +I
Sbjct: 638 LHDGREIHSLIFHTGFDLD-ELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMI 696

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             +A+ G +K AL++  +M    + PD  +    L+AC + G +  G QI   ++     
Sbjct: 697 VGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGI 756

Query: 432 DEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
           +  V   + ++D+  + GF   A    ++++ + + ++W +++
Sbjct: 757 EPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLL 799



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 42/300 (14%)

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSS 438
           S+  L+        G  PD F+ A +LSAC  + +L LG  +H  VIK   +   F Q +
Sbjct: 28  SERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGA 87

Query: 439 LIDMYSKCGFKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           LI +Y+KC     A  +F          V W ++I G+ Q G   EA+++F +M  N   
Sbjct: 88  LIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMR-NSAV 146

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D+V  +T + A                                   Y   G L  A ++
Sbjct: 147 PDQVALVTVLNA-----------------------------------YISLGKLDDACQL 171

Query: 557 FDSM--SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           F  M    RNVV+W+ MI  +       +A + F QM   G+K +  T  ++L A +   
Sbjct: 172 FQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLA 231

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           ++  G          G E  +   + ++++  +    + A ++  ++    N  +W A+L
Sbjct: 232 ALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAIS-QKNMIVWNAML 290


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/699 (33%), Positives = 393/699 (56%), Gaps = 22/699 (3%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L++  + +N   E++L Y  MI       N+ +P++L+A + L D+  G+++H  + 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 123 KCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           K G+  D V +  +++  Y + G      KVFD+++ R+ VSW+S+I+S          L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELC---SLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + F  M+ E VEP   T++S+  AC  L     L   + +H + LR K +++  + N+ +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY K G L S++        R   +W  ++S   ++    +ALE   +M+    EP+  
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ +VL +C+ L  LR GK +H   ++ G   E  ++G AL++ Y  C ++    +V   
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQL 417
           + +R I  WN +I+ Y++    KEAL L + M+ + GL+ +S ++A  + AC   G+   
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423

Query: 418 GLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
              IHG V+K  +D +D FVQ++L+DMYS+ G  ++A  +F +++ + +V WN+MI G+ 
Sbjct: 424 KEAIHGFVVKRGLD-RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482

Query: 476 QNGNSLEAINLFHQMY-----------LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
            + +  +A+ L H+M               L+ + +T +T + +C+ +  L KGK +H  
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
            I   +  D+ + +AL DMYAKCG LQ +++VFD + ++NV++W+ +I  YGMHG   +A
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVD 643
             L + M+  G+KPNEVTF+++  ACSHSG V+EG   F  M+  +GVEP   HYAC+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662

Query: 644 LLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           LL R+G I+ A+++++ MP   N    W +LL   RIH  +++ +   + L     N   
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +Y LL+NIY+  G WD+  +VR  M+  G++K PG S I
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 305/603 (50%), Gaps = 26/603 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDP-PASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L ++  +L+ +    ++HAH+   G   D    +  L+  Y + G   +   VFD   E 
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG---DLGSGE 115
           +   W  LI        +E ++  +  M+ E    S+F   SV+ ACS+L     L  G+
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH   ++ G + +  I  +++  YG+ G L  ++ +      RD+V+W+++++S   N 
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLG 234
            + E L+    MV EGVEPD  T+ S+  AC  L  LR  + +H + L+   +  +  +G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-VKE 293
           ++ + MY  C  +LS  R F  +  R    W AMI+ Y+++   ++AL  F+ M E    
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N  T+  V+ +C   G     +++H  ++++G+  +  ++   L++ Y+  GK+    
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD-RFVQNTLMDMYSRLGKIDIAM 460

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-----------GLMPDSFSV 402
           ++   + +R++++WN +I+ Y      ++AL LL +MQ              L P+S ++
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
            + L +C  + +L  G +IH + IK +   D  V S+L+DMY+KCG   ++  +F++I Q
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K+V+ WN +I  +  +GN  EAI+L   M +  ++ +EVTF++   ACS+ G +++G  +
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640

Query: 522 HHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMH 578
            + +   YGV         + D+  + G ++ A ++ + M        +WS+++    +H
Sbjct: 641 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700

Query: 579 GQL 581
             L
Sbjct: 701 NNL 703



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 277/554 (50%), Gaps = 25/554 (4%)

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           SR    W  ++ S   +  + E +  +  M+  G++PD     +L +A  +L  +   + 
Sbjct: 59  SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 218 IHGHVLRRKIKIDG-PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           IH HV +    +D   + N+ + +Y KCGD  +  + F +I +R   SW ++IS      
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW---LREGKSVHCQIIRKGMGPEYD 333
            ++ ALE+F  ML+   EP+  TL++V+ +C+ L     L  GK VH   +RK  G    
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK--GELNS 236

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++   L+  Y + GK++  + ++ + G R++++WN ++S   +     EALE L +M   
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNL 451
           G+ PD F+++S L AC ++  L+ G ++H + +K    DE  FV S+L+DMY  C     
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACS 510
              +F+ +  + + +WN+MI G+ QN +  EA+ LF  M  +  L  +  T    + AC 
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
             G   + + +H  ++  G+ +D ++   L DMY++ G +  A R+F  M +R++V+W+ 
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476

Query: 571 MIDCYGMHGQLNDAASLFKQMLD-----------SGIKPNEVTFMNILWACSHSGSVEEG 619
           MI  Y       DA  L  +M +             +KPN +T M IL +C+   ++ +G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           K          +  D+   + +VD+ ++ G ++ + K+   +P   N   W  ++    +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGM 595

Query: 680 H----KRIDVMKTI 689
           H    + ID+++ +
Sbjct: 596 HGNGQEAIDLLRMM 609



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 248/519 (47%), Gaps = 25/519 (4%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y ++G L SS+++  +F   D   W  ++     N    E++    +M+ E     
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVF 153
            F   SVL ACS L  L +G+++H   +K G  D++  + ++++  Y     +   R+VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSL 212
           D M  R +  W+++IA Y  N    E L +F  M    G+  +  TM  +  AC    + 
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
               +IHG V++R +  D  + N+ + MYS+ G +  A R F K+E R   +W  MI+ Y
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481

Query: 273 NRSGWFQKALESFVKMLEVKE-----------EPNLITLITVLGSCAGLGWLREGKSVHC 321
             S   + AL    KM  ++            +PN ITL+T+L SCA L  L +GK +H 
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             I+  +  +   +G AL++ YA+CG +    KV   I ++N+++WN++I  Y   G  +
Sbjct: 542 YAIKNNLATDV-AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-----CKDEFVQ 436
           EA++LL  M   G+ P+  +  S  +AC + G +  GL+I  +V+K D       D +  
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHY-- 657

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++D+  + G    AY L   + +       W+S++ G  +  N+LE   +  Q  +  
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL-GASRIHNNLEIGEIAAQNLIQL 716

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
                  ++      S+ G  +K   V   +   GVRK+
Sbjct: 717 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 5/409 (1%)

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
           + R    W  ++    RS   ++A+ ++V M+ +  +P+      +L + A L  +  GK
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H  + + G G +   +   L+  Y +CG      KV   I ERN +SWN LIS     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQLGLQIHGHVIKIDCKDEF 434
              + ALE    M    + P SF++ S ++AC N+     L +G Q+H + ++    + F
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++L+ MY K G    + +L      + +V WN+++    QN   LEA+    +M L  
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTA 553
           +E DE T  + + ACS++  L  GK +H   +  G + ++ ++ +AL DMY  C  + + 
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS-GIKPNEVTFMNILWACSH 612
           +RVFD M +R +  W+AMI  Y  +    +A  LF  M +S G+  N  T   ++ AC  
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           SG+    +     +   G++ D      ++D+ SR G I+ A ++   M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 10/178 (5%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M +  SC  L  L +   +HA+ +   L  D    + L++ YA+ G L+ SR VFD   +
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V+I  Y  +   +E+I L   M+ +    +   + SV  ACS  G +  G ++
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640

Query: 118 HGRIIKC--GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD---VVSWSSIIAS 170
              ++K   G +        ++   G  G + +A ++ + M  RD     +WSS++ +
Sbjct: 641 F-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLLGA 696


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/729 (32%), Positives = 378/729 (51%), Gaps = 9/729 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
             LHA+LL +G  +       LI  Y++      +R VFD   +P    W+ L+  Y  N
Sbjct: 24  AHLHANLLKSG--FLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNN 81

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
                +I  +H M  E    + F  P VL+    + D   G +VH   +  GF  D  + 
Sbjct: 82  GLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVA 138

Query: 134 TSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            +++  YG FG +DDAR+VFD+  S R+ VSW+ ++++Y  N    + +++F  MV  G+
Sbjct: 139 NALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +P       +  AC    ++   R +H  V+R   + D    N+ + MY K G +  A  
Sbjct: 199 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 258

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F K+      SW A+IS    +G   +A+E  ++M      PN+  L ++L +CAG G 
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 318

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              G+ +H  +I+     + DY+G  L++ YA+   + +  KV   +  R+++ WN LIS
Sbjct: 319 FDLGRQIHGFMIKANADSD-DYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CK 431
             +  G   EA  +   ++  GL  +  ++A+ L +  ++ +     Q+H    KI    
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V + LID Y KC   + A  +FE      ++   SMI    Q  +   AI LF +M 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 497

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              LE D     + + AC+++   E+GK VH  LI      D +   AL   YAKCG ++
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+  F S+ ER VVSWSAMI     HG    A  LF +M+D GI PN +T  ++L AC+
Sbjct: 558 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN 617

Query: 612 HSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H+G V+E K YFN+M+ +FG++   +HY+CM+DLL R+G ++ A ++++SMPF AN S+W
Sbjct: 618 HAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVW 677

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           GALL   R+HK  ++ K   ++L +     +G + LL+N YA  G W+E  KVR +M+ +
Sbjct: 678 GALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDS 737

Query: 731 GLKKVPGYS 739
            +KK P  S
Sbjct: 738 NIKKEPAMS 746



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 286/584 (48%), Gaps = 8/584 (1%)

Query: 1   MPLFRSCTNLRKL-TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKEP 58
           +P+   C    +L  ++HA  + TG   D   +  L+  Y   G +  +R VFD    E 
Sbjct: 106 LPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSER 165

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           ++  W  L+  Y+ N+   ++I ++ +M+      + F +  V+ AC+   ++ +G +VH
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 225

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +++ G++KD     +++  Y + G +D A  +F+KM   DVVSW+++I+    N    
Sbjct: 226 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             +++   M   G+ P+   + S+ +AC    +    R IHG +++     D  +G   +
Sbjct: 286 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K   L  A + F  +  R    W A+IS  +  G   +A   F  + +     N  
Sbjct: 346 DMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT 405

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           TL  VL S A L      + VH   + + +G  +D ++   LI+ Y +C  +S+  +V  
Sbjct: 406 TLAAVLKSTASLEAASATRQVHA--LAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 463

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                +I++   +I+  ++    + A++L ++M   GL PD F ++S L+AC ++ + + 
Sbjct: 464 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+H H+IK     D F  ++L+  Y+KCG    A L F  + ++ VV W++MI G  Q
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIY 535
           +G+   A+ LF +M    +  + +T  + + AC++ G +++ K   + +   +G+ +   
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 643

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             + + D+  + G L  A  + +SM  + N   W A++    +H
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 687



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 224/468 (47%), Gaps = 23/468 (4%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           +L P   +H ++L+        L N  I  YSKC     A R F +I   C  SW+++++
Sbjct: 19  ALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVT 76

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y+ +G  + A+++F  M       N   L  VL  C     L  G  VH   +  G G 
Sbjct: 77  AYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL-KCVPDAQL--GAQVHAMAMATGFGS 133

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQ 389
           +  ++  AL+  Y   G M +  +V    G ERN +SWN L+S Y +     +A+++  +
Sbjct: 134 DV-FVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGF 448
           M   G+ P  F  +  ++AC    ++  G Q+H  V+++   KD F  ++L+DMY K G 
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGR 252

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            ++A ++FE++    VV WN++I G   NG+   AI L  QM  + L  +     + ++A
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKA 312

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+  G  + G+ +H  +I      D YI   L DMYAK   L  A +VFD MS R+++ W
Sbjct: 313 CAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILW 372

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI------LWACSHSGSV----EE 618
           +A+I      G+ ++A S+F  +   G+  N  T   +      L A S +  V    E+
Sbjct: 373 NALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEK 432

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLS-----RSGDIEGAFKMIHSM 661
             F F+A  + G+       +C+ D +       SGDI     MI ++
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 480


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/704 (32%), Positives = 376/704 (53%), Gaps = 39/704 (5%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E+I L   + +    +++  Y  ++  C+ L     G+ VH ++ + G   D  +  S
Sbjct: 59  LKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +FG +    +VF +MT RDVV+WSS+IA+Y  N   ++    F  M    +EP+
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T LS+ +AC     L  AR IH  V    ++ D  +  + I MYSKCG++  A   F 
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+++R   SWTA+I    +     +A E + KML+    PN +T +++L SC     L  
Sbjct: 239 KMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H  I  +G+  +   +  ALI  Y +C  + +  +    + +R+++SW+ +I+ YA
Sbjct: 299 GRRIHSHISERGLETDV-VVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYA 357

Query: 376 RKG-MSKEAL----ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           + G   KE+L    +LL +M+  G+ P+  +  S L AC   G+L+ G QIH  + K+  
Sbjct: 358 QSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGF 417

Query: 431 K-DEFVQSSLIDMYSKCGF-------------KNL------------------AYLLFER 458
           + D  +Q+++ +MY+KCG              KN+                  A  +F  
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSE 477

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  ++VV WN MI G+ Q+G+  +   L   M +   + D VT ++ ++AC  +  LE+G
Sbjct: 478 MSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG 537

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K VH + +  G+  D  + T+L  MY+KCG++  A+ VFD +S R+ V+W+AM+  YG H
Sbjct: 538 KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQH 597

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQH 637
           G   +A  LFK+ML   + PNE+TF  ++ AC  +G V+EG+  F  M+  F ++P  QH
Sbjct: 598 GIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQH 657

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           Y CMVDLL R+G ++ A + I  MP   + S+W ALL  C+ H  + + +     +    
Sbjct: 658 YGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLE 717

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++   Y  LSNIYA+ G WD+  KVR +M+  GLKK  G S+I
Sbjct: 718 PSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSI 761



 Score =  291 bits (745), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 184/650 (28%), Positives = 318/650 (48%), Gaps = 49/650 (7%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +   C  LR+      +H  L   GL  D      LI  Y++ G + S   VF      D
Sbjct: 84  IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD 143

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y  NN   ++   + +M       +   + S+L+AC++   L    ++H 
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT 203

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +   G + D  + T+++  Y + G +  A ++F KM  R+VVSW++II +   +  ++E
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             +++  M++ G+ P+ VT +SL  +C    +L   R IH H+  R ++ D  + N+ I 
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT 323

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK-ALESFVKMLE-VKEE--- 294
           MY KC  +  A  TF ++ KR   SW+AMI+ Y +SG+  K +L+   ++LE ++ E   
Sbjct: 324 MYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVF 383

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE----------YDYLG-------- 336
           PN +T +++L +C+  G L +G+ +H +I + G   +          Y   G        
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443

Query: 337 ------------PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
                        +L+  Y +CG ++  EKV   +  RN++SWN++I+ YA+ G   +  
Sbjct: 444 FSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVF 503

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
           ELL  M+  G  PD  ++ S L ACG + +L+ G  +H   +K+  + D  V +SLI MY
Sbjct: 504 ELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMY 563

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           SKCG    A  +F++I  +  V WN+M+ G+ Q+G   EA++LF +M    +  +E+TF 
Sbjct: 564 SKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFT 623

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVR----KDIYIDTALTDMYAKCGDLQTAQRVFDS 559
             I AC   G +++G+ +  +++    R    K  Y    + D+  + G LQ A+     
Sbjct: 624 AVISACGRAGLVQEGREI-FRIMQEDFRMKPGKQHY--GCMVDLLGRAGRLQEAEEFIQR 680

Query: 560 MS-ERNVVSWSAMIDCYGMHG--QLNDAASLFKQMLDSGIKPNEVTFMNI 606
           M  E ++  W A++     H   QL + A+     L+       VT  NI
Sbjct: 681 MPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNI 730



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 200/395 (50%), Gaps = 43/395 (10%)

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           + G  KEA++LL  ++  GL+ +S +    +  C  +   + G  +H  + ++    D +
Sbjct: 55  KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + +SLI+ YSK G       +F R+  + VV W+SMI  +  N +  +A + F +M    
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +E + +TFL+ ++AC+N   LEK + +H  + + G+  D+ + TAL  MY+KCG++  A 
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F  M ERNVVSW+A+I     H +LN+A  L+++ML +GI PN VTF+++L +C+   
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMV----------------------DLLSRSGDIE 652
           ++  G+   + +   G+E D+     ++                      D++S S  I 
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354

Query: 653 G--------------AFKMIHSMP----FPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           G               F+++  M     FP N   + ++L  C +H  ++  + I  E+S
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFP-NKVTFMSILKACSVHGALEQGRQIHAEIS 413

Query: 695 VTG-TNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
             G  +D    T + N+YA+ G+  E  +V S ME
Sbjct: 414 KVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME 448


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/647 (35%), Positives = 373/647 (57%), Gaps = 6/647 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+ C     L  G+ +H +I+  G   +  +  S++  Y        A+ VF  + + 
Sbjct: 8   SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67

Query: 160 -DVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARS 217
            D+  W+ ++A+   N    EGL++FH ++    ++PD  T  S+ +AC  L  +   + 
Sbjct: 68  LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H HV++    +D  + +S + MY+KC     A + F ++ +R   SW  +ISCY + G 
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +KALE F +M     +P+ +TL TV+ SCA L  L  GK +H +++R G   +  ++  
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALD-GFVSS 246

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL++ Y +CG +   ++V   I  +N++SWN +I+ Y+ KG SK  +EL  +M   G+ P
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
              +++S L AC    +LQLG  IHG++I+   + D FV SSLID+Y KCG    A  +F
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           + + + +VV WN MI G+ + G+ LEA+ +F  M    ++ D +TF + + ACS +  LE
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           KGK +H+ +I   +  +  +  AL DMYAKCG +  A  +F+ + ER+ VSW++MI  YG
Sbjct: 427 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 486

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDL 635
            HGQ  +A  LF++M  S  KP++VTF+ IL ACSH+G V+EG +YFN M   +G +P +
Sbjct: 487 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV 546

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMP-FPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           +HY+C++DLL R G +  A++++   P    +  +   L + C +HK++D+ + I + L 
Sbjct: 547 EHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLI 606

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               +D   Y +LSN+YA    WDE  KVR  ++  GLKK PG S I
Sbjct: 607 EKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWI 653



 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/591 (30%), Positives = 320/591 (54%), Gaps = 10/591 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L ++C + + L +   +H  ++  GL  +      LI  Y      +S++LVF T + 
Sbjct: 7   LSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIEN 66

Query: 58  P-DSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGE 115
           P D  +W  L+     N  F E + ++H+++         F YPSVL+ACS LG +G G+
Sbjct: 67  PLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 126

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            VH  +IK GF  D V+ +S +  Y +    +DA K+FD+M  RDV SW+++I+ Y+ + 
Sbjct: 127 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 186

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              + L++F  M   G +PD VT+ ++  +C  L  L   + IH  ++R    +DG + +
Sbjct: 187 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 246

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY KCG L  A+  F +I+++   SW +MI+ Y+  G  +  +E F +M E    P
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
            L TL ++L +C+    L+ GK +H  IIR  +  +  ++  +LI+ Y +CG +   E V
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADI-FVNSSLIDLYFKCGNIGSAENV 365

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              + + N++SWN++IS Y + G   EAL +   M+  G+ PD+ +  S L AC  +  L
Sbjct: 366 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 425

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G +IH  +I+   + +E V  +L+DMY+KCG  + A  +F ++ ++  V W SMI  +
Sbjct: 426 EKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAY 485

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKD 533
             +G + EA+ LF +M  +  + D+VTFL  + ACS+ G +++G +  +++I+ YG +  
Sbjct: 486 GSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA 545

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLN 582
           +   + L D+  + G L+ A  +     +   +V   S +     +H +L+
Sbjct: 546 VEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLD 596



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 2/168 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD    L+ ++ C +   L++GK +H K++S G++ +I +  +L ++Y  C   Q+A+ V
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 557 FDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSHSG 614
           F ++    ++  W+ ++     +    +   +F ++L    +KP+  T+ ++L ACS  G
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            V  GK     +   G   D+   +  V + ++    E A K+   MP
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP 168


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/731 (32%), Positives = 388/731 (53%), Gaps = 3/731 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++H+     G    P  +  LI+ Y++ G + S++ VF+     D   W  +I     
Sbjct: 179 VKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQ 238

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N   EE+ILL+  M   +   + ++  SVL A + +     GE++H  +IK GF  +  +
Sbjct: 239 NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYV 298

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++  Y     L  A ++F  M SRD VS++S+I+           L++F  M R+ +
Sbjct: 299 CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL 358

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD +T+ SL  AC  + +L     +H H ++  +  D  L  S + +YSKC D+ +A +
Sbjct: 359 KPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHK 418

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F+  E      W  M+  Y +      + E F +M      PN  T  ++L +C  LG 
Sbjct: 419 FFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGA 478

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H  +I+ G      Y+   LI+ YA+ G+++   +++  + E +++SW  +I+
Sbjct: 479 LYLGEQIHTHVIKTGFQLNV-YVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIA 537

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            Y +  M  EAL+L  +M+  G+  D+   AS++SAC  + +L+ G QIH          
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGA 597

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  + ++LI +Y++CG    AYL FE+I  K+ + WNS++ G  Q+G   EA+ +F +M 
Sbjct: 598 DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
               E++  T+ +AI A +++  +++G+ +H  ++  G   +  +  +L  +YAK G + 
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSIS 717

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A R F+ MSERNV+SW+AMI  Y  HG   +A  LF++M   GI PN VTF+ +L ACS
Sbjct: 718 DAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G V+EG  YF +M +I  + P  +HY C+VDLL R+G ++ A + I  MP PA+  IW
Sbjct: 778 HIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIW 837

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL+ C IHK I++ +     L      D+  Y L+SNIYA    W      R +M+  
Sbjct: 838 RTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDX 897

Query: 731 GLKKVPGYSTI 741
           G+KK PG S I
Sbjct: 898 GVKKEPGRSWI 908



 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/697 (27%), Positives = 352/697 (50%), Gaps = 8/697 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L +  RLH  +  +G   +P     L+++Y   G    +  VFD       F W  +I 
Sbjct: 73  SLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIH 132

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGF 126
            ++      +   L+ +M+ E  T + + +  VL+AC   GD+     ++VH R    GF
Sbjct: 133 VFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGF 191

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D   ++   ++  Y + G ++ A+KVF+ +  +D+V+W ++I+    N    E + +F  
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M    + P    + S+  A  ++        +H  V++     +  + N  + +YS+   
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L+SAER F  +  R   S+ ++IS   + G+  +ALE F KM     +P+ IT+ ++L +
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA +G L +G  +H   I+ GM  +   L  +L++ Y++C  +    K        NI+ 
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADI-ILEGSLLDLYSKCADVETAHKFFLXTETENIVL 430

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN+++  Y +     ++ E+  QMQ  G++P+ F+  S L  C ++G+L LG QIH HVI
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490

Query: 427 KIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K   + + +V S LIDMY+K G   LA  +  R+ +  VV W +MI G+ Q+    EA+ 
Sbjct: 491 KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQ 550

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF +M    ++ D + F +AI AC+ I  L +G+ +H +  + G   D+ I+ AL  +YA
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           +CG +Q A   F+ + ++N +SW++++      G   +A  +F +ML +  + N  T+ +
Sbjct: 611 RCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGS 670

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
            + A +   ++++G+   + +   G + + +    ++ L ++SG I  A++  + M    
Sbjct: 671 AISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ER 729

Query: 666 NGSIWGALLNGCRIHK-RIDVMKTIEKELSVTGTNDN 701
           N   W A++ G   H   ++ ++  E E+ V G   N
Sbjct: 730 NVISWNAMITGYSQHGCGMEALRLFE-EMKVCGIMPN 765



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 176/595 (29%), Positives = 304/595 (51%), Gaps = 5/595 (0%)

Query: 85  KMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             + E+   SN+  Y  +L  C + G L    ++H RI K GFD + ++  S++  Y   
Sbjct: 47  NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G    A KVFD+ ++R V SW+ +I  +       +   +F  M+ EG+ P+  T   + 
Sbjct: 107 GDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL 166

Query: 204 EAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
           +AC G   +    + +H             + N  I +YSK G + SA++ F  I  +  
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +W AMIS  +++G  ++A+  F  M   +  P    L +VL +   +     G+ +HC 
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +I+ G   E  Y+   L+  Y+   K+   E++   +  R+ +S+N LIS   ++G S  
Sbjct: 287 VIKWGFHSE-TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLID 441
           ALEL  +MQ   L PD  +VAS LSAC +VG+L  G+Q+H H IK     D  ++ SL+D
Sbjct: 346 ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD 405

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +YSKC     A+  F   + +++V+WN M+  + Q  N  ++  +F QM +  +  ++ T
Sbjct: 406 LYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFT 465

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           + + ++ C+++G L  G+ +H  +I  G + ++Y+ + L DMYAK G L  A R+   + 
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           E +VVSW+AMI  Y  H   ++A  LF++M   GI+ + + F + + AC+   ++ +G+ 
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                   G   DL     ++ L +R G I+ A+     +    N S W +L++G
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 228/423 (53%), Gaps = 1/423 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S   L K  +LH+H +  G+  D      L++ Y++   + ++   F   +  +  +W V
Sbjct: 374 SVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNV 433

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  Y   +   +S  ++ +M  E    + F YPS+LR C+SLG L  GE++H  +IK G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  +  + + ++  Y ++G L  A ++  ++   DVVSW+++IA Y  +   SE L++F 
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G++ D +   S   AC  + +LR  + IH          D  + N+ I +Y++CG
Sbjct: 554 EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCG 613

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            +  A   F KI  +   SW +++S   +SG+F++AL+ FV+ML  + E N+ T  + + 
Sbjct: 614 RIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAIS 673

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           + A L  +++G+ +H  +++ G   E + +  +LI  YA+ G +S+  +  + + ERN++
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSERE-VSNSLISLYAKSGSISDAWREFNDMSERNVI 732

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN +I+ Y++ G   EAL L  +M+  G+MP+  +    LSAC ++G ++ GL     +
Sbjct: 733 SWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792

Query: 426 IKI 428
            KI
Sbjct: 793 FKI 795



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 12/193 (6%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           N+++  ++H+ +L TG   +   S  LI  YA+ GS+  +   F+   E +   W  +I 
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  +    E++ L+ +M       ++  +  VL ACS +G +  G        +  F  
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDY----FESMFKI 795

Query: 129 DDVIQTS-----ILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLK 182
            D++  S     ++   G  G LD A +   +M    D + W +++++   + ++  G +
Sbjct: 796 HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 183 MFHSMVREGVEPD 195
             H ++   +EP+
Sbjct: 856 AAHHLLE--LEPE 866


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/716 (32%), Positives = 378/716 (52%), Gaps = 3/716 (0%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D  +   +I  YA  G +  +R  F    E D   W  +I  ++ N    +SI ++ +M 
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R            VL+AC +L +   G +VHG ++K GFD D V  +++L  Y +   LD
Sbjct: 174 RCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLD 233

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           D+  VF ++  ++ VSWS++IA    N    EGL++F  M   GV        SL  +C 
Sbjct: 234 DSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA 293

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            L +LR  + +H H L+     D  +G + + MY+KCG +  A++    + K    S+ A
Sbjct: 294 ALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNA 353

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I  Y RS    +AL+SF  +L+     + ITL   L +CA +    EG+ VH   + K 
Sbjct: 354 IIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV-KS 412

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +      +  A+++ Y +C  ++E   +   +  R+ +SWN +I+   + G  +E L   
Sbjct: 413 ISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHF 472

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKC 446
             M    + PD F+  S L AC    +L  G++IH  +IK     D FV ++L+DMY KC
Sbjct: 473 ASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKC 532

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G    A  + +R +QK++V WN++I GF     S +A   F +M    +  D  T+   +
Sbjct: 533 GMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVL 592

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
             C+N+  +  GK +H ++I   ++ D+YI + L DMY+KCG++Q +Q +F+    R+ V
Sbjct: 593 DTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFV 652

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           +W+AM+  Y  HG   +A  LF+ M    +KPN  TF+++L AC+H G V++G  YF+ M
Sbjct: 653 TWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVM 712

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
              +G++P  +HY+CMVD+L RSG I+ A  ++  MPF A+  IW  LL+ C+IH  ++V
Sbjct: 713 LSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEV 772

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +   + L      D+    LLSNIYA+ G W    ++R +M    LKK PG S I
Sbjct: 773 AEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWI 828



 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 176/619 (28%), Positives = 319/619 (51%), Gaps = 38/619 (6%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L +     ++H  ++  G   D    + L+  YA+   L  S  VF    E +
Sbjct: 187 VLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKN 246

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I   + N+   E + L+ +M      +S  IY S+ R+C++L  L  G+++H 
Sbjct: 247 WVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHS 306

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K  F  D ++ T+ L  Y + G + DA+KV   M    + S+++II  Y  +    +
Sbjct: 307 HALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQ 366

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK F  +++ G+  D +T+     AC  +      R +HG  ++     +  + N+ + 
Sbjct: 367 ALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILD 426

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KC  L  A   F  +E+R   SW A+I+   ++G  ++ L  F  M+  + EP+  T
Sbjct: 427 MYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFT 486

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CAG   L  G  +H +II+ GMG +  ++G AL++ Y +CG + + +K+    
Sbjct: 487 YGSVLKACAGRQALNTGMEIHTRIIKSGMGFD-SFVGAALVDMYCKCGMIEKADKIHDRT 545

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++ ++SWN +IS ++    S++A +   +M   G+ PD+F+ A+ L  C N+ ++ LG 
Sbjct: 546 EQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGK 605

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH  +IK + + D ++ S+L+DMYSKCG    + L+FE+   +  V WN+M+CG+  +G
Sbjct: 606 QIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHG 665

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA+ LF  M L  ++ +  TF++ ++AC+++G ++KG  +H            Y D 
Sbjct: 666 LGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKG--LH------------YFDV 711

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
            L++ Y             D  SE     +S M+D  G  G++++A +L ++M     + 
Sbjct: 712 MLSE-YG-----------LDPQSEH----YSCMVDILGRSGRIDEALNLVQKM---PFEA 752

Query: 599 NEVTFMNILWACSHSGSVE 617
           + V + N+L  C   G+VE
Sbjct: 753 DAVIWRNLLSVCKIHGNVE 771



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 180/640 (28%), Positives = 318/640 (49%), Gaps = 40/640 (6%)

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD----- 127
           NNF      L     +  A I  F +  + + CS    L  G++ H R+I CGF+     
Sbjct: 33  NNFST----LAQNQTQPPAKIRTFSH--IYQECSKQNSLNPGKQAHARMIFCGFEPTTFV 86

Query: 128 --------------------------KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
                                     +D V   SI+  Y   G +D ARK F +M  RDV
Sbjct: 87  SNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDV 146

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           VSW+S+I+ +  N +  + + +F  M R GV  D  ++  + +ACG L        +HG 
Sbjct: 147 VSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGL 206

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
           V++     D   G++ + MY+KC  L  +   F ++ ++   SW+AMI+   ++    + 
Sbjct: 207 VVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEG 266

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
           LE F +M  V    +     ++  SCA L  LR GK +H   ++   G +   +G A ++
Sbjct: 267 LELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDI-IVGTATLD 325

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            YA+CG+M++ +KV+ ++ + ++ S+N +I  YAR     +AL+    +   GL  D  +
Sbjct: 326 MYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEIT 385

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           ++ +L+AC ++     G Q+HG  +K I   +  V ++++DMY KC     A  LF+ ++
Sbjct: 386 LSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMME 445

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           ++  V WN++I    QNGN  E +  F  M  + +E D+ T+ + ++AC+    L  G  
Sbjct: 446 RRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGME 505

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H ++I  G+  D ++  AL DMY KCG ++ A ++ D   ++ +VSW+A+I  + +  Q
Sbjct: 506 IHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQ 565

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
             DA   F +ML+ G+ P+  T+  +L  C++  +V  GK     +    ++ D+   + 
Sbjct: 566 SEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICST 625

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           +VD+ S+ G+++ +  M    P   +   W A+L G   H
Sbjct: 626 LVDMYSKCGNMQDSQLMFEKAP-NRDFVTWNAMLCGYAHH 664


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/731 (32%), Positives = 388/731 (53%), Gaps = 3/731 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++H+     G    P  +  LI+ Y++ G + S++ VF+     D   W  +I     
Sbjct: 179 VKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQ 238

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N   EE+ILL+  M   +   + ++  SVL A + +     GE++H  +IK GF  +  +
Sbjct: 239 NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYV 298

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++  Y     L  A ++F  M SRD VS++S+I+           L++F  M R+ +
Sbjct: 299 CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL 358

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD +T+ SL  AC  + +L     +H H ++  +  D  L  S + +YSKC D+ +A +
Sbjct: 359 KPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHK 418

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F+  E      W  M+  Y +      + E F +M      PN  T  ++L +C  LG 
Sbjct: 419 FFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGA 478

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H  +I+ G      Y+   LI+ YA+ G+++   +++  + E +++SW  +I+
Sbjct: 479 LYLGEQIHTHVIKTGFQLNV-YVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIA 537

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            Y +  M  EAL+L  +M+  G+  D+   AS++SAC  + +L+ G QIH          
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGA 597

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  + ++LI +Y++CG    AYL FE+I  K+ + WNS++ G  Q+G   EA+ +F +M 
Sbjct: 598 DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
               E++  T+ +AI A +++  +++G+ +H  ++  G   +  +  +L  +YAK G + 
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSIS 717

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A R F+ MSERNV+SW+AMI  Y  HG   +A  LF++M   GI PN VTF+ +L ACS
Sbjct: 718 DAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G V+EG  YF +M +I  + P  +HY C+VDLL R+G ++ A + I  MP PA+  IW
Sbjct: 778 HIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIW 837

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL+ C IHK I++ +     L      D+  Y L+SNIYA    W      R +M+  
Sbjct: 838 RTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDR 897

Query: 731 GLKKVPGYSTI 741
           G+KK PG S I
Sbjct: 898 GVKKEPGRSWI 908



 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 184/675 (27%), Positives = 342/675 (50%), Gaps = 6/675 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L +  RLH  +  +G   +P     L+++Y   G    +  VFD       F W  +I 
Sbjct: 73  SLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIH 132

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGF 126
            ++      +   L+ +M+ E  T + + +  VL+AC   GD+     ++VH R    GF
Sbjct: 133 VFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGF 191

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D   ++   ++  Y + G ++ A+KVF+ +  +D+V+W ++I+    N    E + +F  
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M    + P    + S+  A  ++        +H  V++     +  + N  + +YS+   
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L+SAER F  +  R   S+ ++IS   + G+  +ALE F KM     +P+ IT+ ++L +
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA +G L +G  +H   I+ GM  +   L  +L++ Y++C  +    K        NI+ 
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADI-ILEGSLLDLYSKCADVETAHKFFLTTETENIVL 430

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN+++  Y +     ++ E+  QMQ  G++P+ F+  S L  C ++G+L LG QIH HVI
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490

Query: 427 KIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K   + + +V S LIDMY+K G   LA  +  R+ +  VV W +MI G+ Q+    EA+ 
Sbjct: 491 KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQ 550

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF +M    ++ D + F +AI AC+ I  L +G+ +H +  + G   D+ I+ AL  +YA
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           +CG +Q A   F+ + ++N +SW++++      G   +A  +F +ML +  + N  T+ +
Sbjct: 611 RCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGS 670

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
            + A +   ++++G+   + +   G + + +    ++ L ++SG I  A++  + M    
Sbjct: 671 AISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ER 729

Query: 666 NGSIWGALLNGCRIH 680
           N   W A++ G   H
Sbjct: 730 NVISWNAMITGYSQH 744



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 176/595 (29%), Positives = 304/595 (51%), Gaps = 5/595 (0%)

Query: 85  KMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             + E+   SN+  Y  +L  C + G L    ++H RI K GFD + ++  S++  Y   
Sbjct: 47  NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G    A KVFD+ ++R V SW+ +I  +       +   +F  M+ EG+ P+  T   + 
Sbjct: 107 GDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL 166

Query: 204 EAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
           +AC G   +    + +H             + N  I +YSK G + SA++ F  I  +  
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +W AMIS  +++G  ++A+  F  M   +  P    L +VL +   +     G+ +HC 
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +I+ G   E  Y+   L+  Y+   K+   E++   +  R+ +S+N LIS   ++G S  
Sbjct: 287 VIKWGFHSE-TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLID 441
           ALEL  +MQ   L PD  +VAS LSAC +VG+L  G+Q+H H IK     D  ++ SL+D
Sbjct: 346 ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD 405

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +YSKC     A+  F   + +++V+WN M+  + Q  N  ++  +F QM +  +  ++ T
Sbjct: 406 LYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFT 465

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           + + ++ C+++G L  G+ +H  +I  G + ++Y+ + L DMYAK G L  A R+   + 
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           E +VVSW+AMI  Y  H   ++A  LF++M   GI+ + + F + + AC+   ++ +G+ 
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                   G   DL     ++ L +R G I+ A+     +    N S W +L++G
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 229/423 (54%), Gaps = 1/423 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S   L K  +LH+H +  G+  D      L++ Y++   + ++   F T +  +  +W V
Sbjct: 374 SVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNV 433

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  Y   +   +S  ++ +M  E    + F YPS+LR C+SLG L  GE++H  +IK G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  +  + + ++  Y ++G L  A ++  ++   DVVSW+++IA Y  +   SE L++F 
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G++ D +   S   AC  + +LR  + IH          D  + N+ I +Y++CG
Sbjct: 554 EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCG 613

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            +  A   F KI  +   SW +++S   +SG+F++AL+ FV+ML  + E N+ T  + + 
Sbjct: 614 RIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAIS 673

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           + A L  +++G+ +H  +++ G   E + +  +LI  YA+ G +S+  +  + + ERN++
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSERE-VSNSLISLYAKSGSISDAWREFNDMSERNVI 732

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN +I+ Y++ G   EAL L  +M+  G+MP+  +    LSAC ++G ++ GL     +
Sbjct: 733 SWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792

Query: 426 IKI 428
            KI
Sbjct: 793 FKI 795



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 12/193 (6%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           N+++  ++H+ +L TG   +   S  LI  YA+ GS+  +   F+   E +   W  +I 
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  +    E++ L+ +M       ++  +  VL ACS +G +  G        +  F  
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDY----FESMFKI 795

Query: 129 DDVIQTS-----ILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLK 182
            D++  S     ++   G  G LD A +   +M    D + W +++++   + ++  G +
Sbjct: 796 HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 183 MFHSMVREGVEPD 195
             H ++   +EP+
Sbjct: 856 AAHHLLE--LEPE 866


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/718 (32%), Positives = 386/718 (53%), Gaps = 6/718 (0%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D  +   +I  YA+ G +  +   F    + D   W  ++  ++ N    +SI ++  M 
Sbjct: 108 DVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMG 167

Query: 88  R-EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL 146
           R E+       +  VL+ACS L D G G +VHG I++ GF KD V  +++L  Y +   L
Sbjct: 168 RSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRL 227

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
           DD+ K+F ++  ++ V WS+IIA    N +   GL++F  M + G+        S+  +C
Sbjct: 228 DDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSC 287

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
             L +L+    +H H L+     D  +G + + MY+KCG L  A+R F  + K     + 
Sbjct: 288 AGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYN 347

Query: 267 AMI-SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           A+I  C      F+ AL+ F  +L+     N I+L     +CA +    +G+ +H   ++
Sbjct: 348 AIIVGCVRNEKGFE-ALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVK 406

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
             +      +  ++++ Y +C  +SE   +   +  R+ +SWN +I+ + + G  +E L 
Sbjct: 407 STLRSNI-CVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLN 465

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
           L   M    + PD F+  S L AC +  +L  G++IH  +IK     D FV  +LIDMY 
Sbjct: 466 LFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYC 525

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  + +RI+Q+++V WN++I GF    +S +A + F++M    ++ D  T+  
Sbjct: 526 KCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAI 585

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + AC+N+  +  GK +H ++I   +  D+YI + L DMY+KCG++Q +  VF+    ++
Sbjct: 586 VLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKD 645

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            V+W+AMI  Y  HG   +A   F++M    ++PN  TF++IL AC+H G +++G  YFN
Sbjct: 646 FVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFN 705

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           AM   +G+EP ++HY+CM+D++ RSG I  A K+I  MPF A+  IW  LL+ C+IH  I
Sbjct: 706 AMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNI 765

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++ +     +      D+    LLSNIYA+ G W +  ++R +M    LKK PG S I
Sbjct: 766 EIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWI 823



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/573 (28%), Positives = 303/573 (52%), Gaps = 4/573 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++  G + D    + L++ YA+   L  S  +F      +   W+ +I   + N+
Sbjct: 197 QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQND 256

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
                + L+ +M +    +S  IY SV R+C+ L  L  G ++H   +KC F  D  + T
Sbjct: 257 EHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGT 316

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  Y + G L DA+++F+ +    +  +++II     N    E L+ F  +++ G+  
Sbjct: 317 ATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF 376

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + +++     AC  +      R +H   ++  ++ +  + NS + MY KC  L  A   F
Sbjct: 377 NEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMF 436

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++E+R   SW A+I+ + ++G  ++ L  F  ML ++ EP+  T  +VL +C+    L 
Sbjct: 437 DEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALN 496

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G  +H +II+ G+G +  ++G ALI+ Y +CG + E +K+   I ++ ++SWN +I+ +
Sbjct: 497 SGMEIHNRIIKSGLGLD-SFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGF 555

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
                S++A     +M    + PD+F+ A  L AC N+ S+ LG QIHG +IK++   D 
Sbjct: 556 TLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDV 615

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           ++ S+L+DMYSKCG    + L+FE+   K  V WN+MICG+ Q+G   EA+  F +M L 
Sbjct: 616 YITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLE 675

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            +  +  TF++ ++AC+++G ++KG  + +  L  YG+   I   + + D+  + G +  
Sbjct: 676 NVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISE 735

Query: 553 AQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
           A ++   M  E + V W  ++    +HG +  A
Sbjct: 736 ALKLIQEMPFEADAVIWRTLLSICKIHGNIEIA 768



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/616 (26%), Positives = 303/616 (49%), Gaps = 35/616 (5%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  +++ CS    L  G++ H R+I  GF  D  I   ++  Y     L+ A KVF+KM+
Sbjct: 46  FSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMS 105

Query: 158 SRDV-------------------------------VSWSSIIASYFDNADVSEGLKMFHS 186
            RDV                               VSW+S+++ +  N +  + + +F  
Sbjct: 106 QRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLD 165

Query: 187 MVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           M R E V  D  T   + +AC  L        +HG ++R     D   G++ + MY+KC 
Sbjct: 166 MGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCK 225

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L  + + F +I  +    W+A+I+   ++      LE F +M +V    +     +V  
Sbjct: 226 RLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFR 285

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           SCAGL  L+ G  +H   ++   G +   +G A ++ YA+CG +++ +++ +++ + ++ 
Sbjct: 286 SCAGLSALKVGTQLHAHALKCDFGSDIT-VGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            +N +I    R     EAL+    +   GL  +  S++ + SAC ++     G Q+H   
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404

Query: 426 IKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K   +    V +S++DMY KC   + A  +F+ ++++  V WN++I    QNGN  E +
Sbjct: 405 VKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETL 464

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
           NLF  M    +E D+ T+ + ++ACS+   L  G  +H+++I  G+  D ++  AL DMY
Sbjct: 465 NLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMY 524

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KCG ++ A+++ D + ++ +VSW+A+I  + +     DA S F +ML   +KP+  T+ 
Sbjct: 525 CKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYA 584

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            +L AC++  SV  GK     +    +  D+   + +VD+ S+ G+++ +  +    P  
Sbjct: 585 IVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP-N 643

Query: 665 ANGSIWGALLNGCRIH 680
            +   W A++ G   H
Sbjct: 644 KDFVTWNAMICGYAQH 659



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 246/485 (50%), Gaps = 13/485 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +FRSC  L  L   T+LHAH L      D    T  ++ YA+ GSL  ++ +F++  +  
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS 342

Query: 60  SFMW-AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSL-GDLGSGEKV 117
              + A+++ C      FE ++  +  +++     +         AC+S+ GDL  G ++
Sbjct: 343 LQCYNAIIVGCVRNEKGFE-ALQFFQLLLKSGLGFNEISLSGAFSACASIKGDL-DGRQL 400

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +K     +  +  SIL  YG+   L +A  +FD+M  RD VSW+++IA++  N + 
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L +F SM+R  +EPD  T  S+ +AC    +L     IH  +++  + +D  +G + 
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGAL 520

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MY KCG +  A++   +IE++   SW A+I+ +      + A   F +ML++  +P+ 
Sbjct: 521 IDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDN 580

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T   VL +CA L  +  GK +H QII+  +  +  Y+   L++ Y++CG M +   V  
Sbjct: 581 FTYAIVLDACANLASVGLGKQIHGQIIKLELHSDV-YITSTLVDMYSKCGNMQDSALVFE 639

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
               ++ ++WN +I  YA+ G+ +EAL    +MQ   + P+  +  S L AC ++G +  
Sbjct: 640 KAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDK 699

Query: 418 GLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSM--IC 472
           GL     ++     +  ++  S +ID+  + G  + A  L + +  +   V+W ++  IC
Sbjct: 700 GLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSIC 759

Query: 473 GFYQN 477
             + N
Sbjct: 760 KIHGN 764



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 249/544 (45%), Gaps = 36/544 (6%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T   + + C +  SL+P +  H  ++      D  + N  + MY +C  L  A + F K+
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 258 E-------------------------------KRCTTSWTAMISCYNRSGWFQKALESFV 286
                                           KR   SW +M+S + ++G  +K+++ F+
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 287 KMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            M   +E   +  T   VL +C+ L     G  VH  I+R G   +    G AL++ YA+
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDV-VTGSALLDMYAK 223

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           C ++ +  K+   I  +N + W+ +I+   +       LEL  +MQ  G+       AS 
Sbjct: 224 CKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASV 283

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
             +C  + +L++G Q+H H +K D   D  V ++ +DMY+KCG    A  +F  + + S+
Sbjct: 284 FRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
             +N++I G  +N    EA+  F  +  + L  +E++   A  AC++I     G+ +H  
Sbjct: 344 QCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSL 403

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
            +   +R +I +  ++ DMY KC  L  A  +FD M  R+ VSW+A+I  +  +G   + 
Sbjct: 404 SVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEET 463

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDL 644
            +LF  ML   ++P++ T+ ++L ACS   ++  G    N +   G+  D      ++D+
Sbjct: 464 LNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDM 523

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI-DVMKTIEKELSVTGTNDNGY 703
             + G IE A K IH          W A++ G  + K   D      + L ++   DN  
Sbjct: 524 YCKCGMIEEA-KKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFT 582

Query: 704 YTLL 707
           Y ++
Sbjct: 583 YAIV 586


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/733 (33%), Positives = 382/733 (52%), Gaps = 13/733 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTR--LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
             LHA LL +G      AS R  LI  Y++      +R VFD   +P    W+ L+  Y 
Sbjct: 24  AHLHASLLKSG----SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYS 79

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            N     +I  +H M  E    + F  P VL+    + D   G +VH   +  GF  D  
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVF 136

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           +  +++  YG FG +DDAR+VF++  S R+ VSW+ ++++Y  N    + +++F  MV  
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G++P       +  AC    ++   R +H  V+R     D    N+ + MY K G +  A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              F K+      SW A+IS    +G   +A+E  ++M      PN+ TL ++L +C+G 
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G    G+ +H  +I+     + DY+G  L++ YA+   + +  KV   +  R+++  N L
Sbjct: 317 GAFDLGRQIHGFMIKANADSD-DYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNAL 375

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
           IS  +  G   EAL L  +++  GL  +  ++A+ L +  ++ +     Q+H   +KI  
Sbjct: 376 ISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D  V + LID Y KC   + A  +FE      ++   SMI    Q  +   AI LF +
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    LE D     + + AC+++   E+GK VH  LI      D +   AL   YAKCG 
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGS 555

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A+  F S+ ER VVSWSAMI     HG    A  LF +M+D GI PN +T  ++L A
Sbjct: 556 IEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCA 615

Query: 610 CSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           C+H+G V+E K YFN+M+ +FG++   +HY+CM+DLL R+G ++ A ++++SMPF AN S
Sbjct: 616 CNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANAS 675

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           IWGALL   R+HK  ++ K   ++L +     +G + LL+N YA  G W+E  KVR +M+
Sbjct: 676 IWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMK 735

Query: 729 VTGLKKVPGYSTI 741
            + +KK P  S I
Sbjct: 736 DSNIKKEPAMSWI 748



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 288/584 (49%), Gaps = 8/584 (1%)

Query: 1   MPLFRSCTNLRKL-TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEP 58
           +P+   C    +L  ++HA  + TG   D   +  L+  Y   G +  +R VF+    E 
Sbjct: 106 LPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           ++  W  L+  Y+ N+   ++I ++ +M+      + F +  V+ AC+   ++ +G +VH
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +++ G+DKD     +++  Y + G +D A  +F+KM   DVVSW+++I+    N    
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             +++   M   G+ P+  T+ S+ +AC    +    R IHG +++     D  +G   +
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K   L  A + F  +  R      A+IS  +  G   +AL  F ++ +     N  
Sbjct: 346 DMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           TL  VL S A L      + VH   ++  +G  +D ++   LI+ Y +C  +S+  +V  
Sbjct: 406 TLAAVLKSTASLEAASTTRQVHALAVK--IGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                +I++   +I+  ++    + A++L ++M   GL PD F ++S L+AC ++ + + 
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+H H+IK     D F  ++L+  Y+KCG    A L F  + ++ VV W++MI G  Q
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIY 535
           +G+   A+ LF +M    +  + +T  + + AC++ G +++ K   + +   +G+ +   
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 643

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             + + D+  + G L  A  + +SM  + N   W A++    +H
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687


>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/740 (32%), Positives = 396/740 (53%), Gaps = 11/740 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL +   LH     TGL  D      LI+ YA+ G L SS  VF   +  D   W  +++
Sbjct: 88  NLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMR 147

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD- 127
              +NN+ ++S+  + KM        N      + A + LG+L  G+ +HG  IK G+  
Sbjct: 148 GCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKD 207

Query: 128 -KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
              +  + S++  Y +   +  A  +F +M  +D+VSW++++     N  + E   + H 
Sbjct: 208 ISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHE 267

Query: 187 MVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           M   G V+PD VT++ +   C EL  LR  R++HG  LRR++ +D  + NS I MYSKC 
Sbjct: 268 MQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCK 327

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           D+  AE  F  I +R   SW AMIS Y+++G  ++A   F ++L+   + +L TL+ +L 
Sbjct: 328 DVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILP 387

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNI 364
           SC    +L+ G+S+HC  ++ G       +  +L+  Y  CG +  C  ++  +    +I
Sbjct: 388 SCDSSEFLQFGESIHCWQLKLGFANNPLAVN-SLMLMYINCGDLVACFSLLQTVSAAADI 446

Query: 365 LSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           + WN +++   + G   EAL+    M Q   +  DS ++ + +SACGN+  L  G  +HG
Sbjct: 447 VCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHG 506

Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
             +K   + +  VQ++LI MY +CG    A ++F     +++  WN MI  F QN +   
Sbjct: 507 LALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRR 566

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A+ LF  +     E +E+T +  + AC+ +G L  GK +H  +I   ++ + ++  AL D
Sbjct: 567 ALELFCHIEF---EPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALED 623

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+ CG L TA ++F S  ER+V +W++MI  +G H     A  LF +M + G +P + T
Sbjct: 624 MYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKST 683

Query: 603 FMNILWACSHSGSVEEGKFYF-NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L ACSHSG V EG +Y+ N + +F VE D +H+ CMVD+L R+G +  A++ I  M
Sbjct: 684 FISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQM 743

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P      +WGALL+ C  H  + + + + + L      + GYY  LSN+Y   G W +  
Sbjct: 744 PTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAV 803

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           ++R I++  GLKK   YS I
Sbjct: 804 ELRRIIQDKGLKKPAAYSLI 823



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 188/691 (27%), Positives = 334/691 (48%), Gaps = 21/691 (3%)

Query: 30  PASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE 89
           P ST L+ +Y+      SS  +FD     D  +W  +I   + N  F  ++ L+ +++ E
Sbjct: 8   PTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGE 67

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
              + +     V+ A S +G+L  G  +HG   K G   D  +  +++  Y + G L  +
Sbjct: 68  GVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSS 127

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
             VF  M  RD++SW+S++     N    + L  F  M     + D V++     A   L
Sbjct: 128 ECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALL 187

Query: 210 CSLRPARSIHGHVLRRKIK--IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
             L   + IHG  ++   K        NS I +YS+C D+ +AE  F +++ +   SW A
Sbjct: 188 GELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNA 247

Query: 268 MISCYNRSGWFQKALESFVKMLEVK----EEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           M+     +   Q+  E+F  + E++     +P+ +T++ ++  CA L  LREG++VH   
Sbjct: 248 MLDGLALN---QRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLT 304

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           +R+ MG ++  +  +LI+ Y++C  +   E V  AI ER+++SWN +IS Y++ G S+EA
Sbjct: 305 LRREMGLDFS-VTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREA 363

Query: 384 LELLVQ-MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLID 441
             L  Q +Q++     S ++ + L +C +   LQ G  IH   +K+    +    +SL+ 
Sbjct: 364 QHLFRQLLQSYSQCSLS-TLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLML 422

Query: 442 MYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDE 499
           MY  CG     + L + +   + +V WN+++ G  QNG+  EA+  F+ M  +  +  D 
Sbjct: 423 MYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDS 482

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           V     I AC N+  L  G  +H   +   +  DI +  AL  MY +CG+++ A+ +F  
Sbjct: 483 VALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGF 542

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
              RN+ SW+ MI  +  +     A  LF  +     +PNE+T + IL AC+  G +  G
Sbjct: 543 SCNRNLCSWNCMISAFSQNKDGRRALELFCHI---EFEPNEITIVGILSACTQLGVLRHG 599

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           K     +    ++ +    A + D+ S  G ++ AF++  S P   + + W ++++    
Sbjct: 600 KQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSP-ERSVAAWNSMISAFGF 658

Query: 680 HKRIDVMKTIEKELSVTGT--NDNGYYTLLS 708
           H        +  E+   GT    + + +LLS
Sbjct: 659 HSNGGKAIELFHEMRECGTRPTKSTFISLLS 689



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 232/484 (47%), Gaps = 9/484 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL      LR+   +H   L   +  D   +  LI+ Y++   ++ +  VF    E D 
Sbjct: 285 IPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDL 344

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  N    E+  L+ ++++  +  S     ++L +C S   L  GE +H  
Sbjct: 345 VSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCW 404

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSE 179
            +K GF  + +   S++  Y   G L     +   ++ + D+V W++++A    N    E
Sbjct: 405 QLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWE 464

Query: 180 GLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            LK F+ M ++  V  D V + ++  ACG L  L    S+HG  L+  ++ D  + N+ I
Sbjct: 465 ALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALI 524

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY +CG++ +A   F     R   SW  MIS ++++   ++ALE F     ++ EPN I
Sbjct: 525 TMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFC---HIEFEPNEI 581

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++ +L +C  LG LR GK +H  +IR  +     ++  AL + Y+ CG++    ++  +
Sbjct: 582 TIVGILSACTQLGVLRHGKQIHGHVIRSRLQGN-SFVSAALEDMYSNCGRLDTAFQIFQS 640

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             ER++ +WN +IS +       +A+EL  +M+  G  P   +  S LSAC + G +  G
Sbjct: 641 SPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEG 700

Query: 419 LQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGFY 475
           L  + +++++     D      ++DM  + G    AY    ++  Q    +W +++    
Sbjct: 701 LWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACS 760

Query: 476 QNGN 479
            +G+
Sbjct: 761 YHGD 764


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/667 (31%), Positives = 379/667 (56%), Gaps = 11/667 (1%)

Query: 81  LLYHKMIREQATISNFIY--PS--VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
           L +H +  E+A I + +Y  P+  +L  C+S+ +L    ++   +IK G   + + QT +
Sbjct: 32  LPFHTL-SERAHIPSHVYKHPAAVLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKL 87

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  + ++G +++A +VF+ +  +    + +++  Y  N+ +   L     M  + V+P  
Sbjct: 88  VSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV 147

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
                L + CG+   L+  + IHG ++      +       + MY+KC  +  A + F +
Sbjct: 148 YNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDR 207

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           + +R   SW  +I+ ++++G+ +KALE  ++M +  + P+ ITL+TVL + A +G L  G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           KS+H   IR G     + +  AL + Y++CG +     +   + ++ ++SWN ++  Y +
Sbjct: 268 KSIHGYAIRAGFAKLVN-ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFV 435
            G  ++A+ +  +M   G+ P   ++  +L AC ++G L+ G  +H  V +++   D  V
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            +SLI MYSKC   ++A  +F  +  ++ V WN+MI G+ QNG   EA+N F +M    +
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + D  T ++ I A + +      KW+H  +I   + K+I++ TAL DMY+KCG +  A++
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +FD +S+R+V++W+AMID YG HG    A  LF +M    ++PN++T+++++ ACSHSG 
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566

Query: 616 VEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V+EG  +F +M+  +G+EP + HY  MVDLL R+G I+ A+  I +MP     +++GA  
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXX 626

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             C+IHK I+V +   K+L     ++ GY+ LL+NIYA    W +  +VR  ME  GLKK
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 686

Query: 735 VPGYSTI 741
            PG S +
Sbjct: 687 TPGCSVV 693



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 329/627 (52%), Gaps = 18/627 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   CT++++L ++   ++  GL+ +    T+L+  +++ GS+  +  VF+   +    +
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           +  ++K Y  N+  E ++    +M  +  +  + NF Y  +L+ C    DL  G+++HG+
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTY--LLKVCGDNADLKRGKEIHGQ 172

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I   F  +    T ++  Y +   +DDA K+FD+M  RD+VSW++IIA +  N    + 
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++   M  EG  PD +T++++  A  ++  L   +SIHG+ +R        +  +   M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG + +A   F  ++++   SW +M+  Y ++G  +KA+  F KMLE   +P  +T+
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  L +CA LG L  GK VH  + +  +G +   +  +LI  Y++C ++     + + + 
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN-SLISMYSKCKRVDIASDIFNNLN 411

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R  +SWN +I  YA+ G   EAL    +M++ G+ PDSF++ S + A   +   +    
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IHG +I+  C D+  FV ++L+DMYSKCG  ++A  LF+ I  + V+ WN+MI G+  +G
Sbjct: 472 IHGLIIR-SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYI 536
               A++LF +M    +E +++T+L+ I ACS+ G +++G   H K +   YG+   +  
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEG-LRHFKSMKQDYGLEPSMDH 589

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
             A+ D+  + G ++ A    ++M     +  + A      +H  +       K++ +  
Sbjct: 590 YGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFE-- 647

Query: 596 IKPNE----VTFMNILWACSHSGSVEE 618
           + P+E    V   NI  + S    V E
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAE 674


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 240/779 (30%), Positives = 397/779 (50%), Gaps = 41/779 (5%)

Query: 1   MPLFRSCTNLR---KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M + ++C   R   K+ + H      G+  D       I +Y +   +  +R VFD    
Sbjct: 44  MAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVA 103

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W  L  CY+   F ++ + ++ KM   +   +     S+L  CS L DL SG+++
Sbjct: 104 RDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEI 163

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG +++ G  +D  + ++ +  Y +  C+ +A+ VFD M  RDVV+W+S+ + Y +    
Sbjct: 164 HGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFP 223

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            +GL +F  MV +GV+PD VT+  +  AC +L  L+  ++IHG  L+  +  +  + N+ 
Sbjct: 224 QKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNAL 283

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + +Y  C  +  A+  F  +  R   +W ++ SCY   G+ QK L  F +M     +P+ 
Sbjct: 284 VNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDP 343

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           + + ++L +C+ L  L+ GK++H   ++ GM  E  ++  AL+  YA C  + E + V  
Sbjct: 344 MAMSSILPACSQLKDLKSGKTIHGFAVKHGM-VEDVFVCTALVNLYANCLCVREAQTVFD 402

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  RN+++WN L S Y   G  ++ L +  +M   G+ PD  ++ S L AC ++  L+ 
Sbjct: 403 LMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKS 462

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G  IHG  ++    +D FV ++L+ +Y+KC     A ++F+ I  + V  WN ++  ++ 
Sbjct: 463 GKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFT 522

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD--- 533
           N    + + +F QM  + ++ DE+T+   I  C    ++E+   +  K+ + G + D   
Sbjct: 523 NKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETT 582

Query: 534 IYI--------------------------------DTALTDMYAKCGDLQTAQRVFDSMS 561
           IY                                   AL DMYAKCG L  ++ VFD M 
Sbjct: 583 IYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMP 642

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
            ++V SW+ MI   GMHG   +A SLF++ML S +KP+  TF  +L ACSHS  VEEG  
Sbjct: 643 IKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQ 702

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            FN+M R   VEP+ +HY C+VD+ SR+G +E A+  I  MP       W A L GCR++
Sbjct: 703 IFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVY 762

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           K +++ K   K+L     N +  Y  L NI      W E  K+R +M+  G+ K PG S
Sbjct: 763 KNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCS 821



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/544 (30%), Positives = 295/544 (54%), Gaps = 12/544 (2%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           ++ +V +AC++  D    ++ H    +CG   D  I  + +  YG+  C++ AR+VFD +
Sbjct: 42  VFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDL 101

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
            +RDVV+W+S+ A Y +     +GL +F  M    V+ + +T+ S+   C +L  L+  +
Sbjct: 102 VARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGK 161

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            IHG V+R  +  D  + ++F+  Y+KC  +  A+  F  +  R   +W ++ SCY   G
Sbjct: 162 EIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCG 221

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + QK L  F +M+    +P+ +T+  +L +C+ L  L+ GK++H   ++ GM  E  ++ 
Sbjct: 222 FPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGM-VENVFVS 280

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL+  Y  C  + E + V   +  RN+++WN L S Y   G  ++ L +  +M   G+ 
Sbjct: 281 NALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVK 340

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           PD  +++S L AC  +  L+ G  IHG  +K    +D FV ++L+++Y+ C     A  +
Sbjct: 341 PDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTV 400

Query: 456 FERIQQKSVVMWNSMI-----CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           F+ +  ++VV WNS+      CGF Q G     +N+F +M LN ++ D VT L+ + ACS
Sbjct: 401 FDLMPHRNVVTWNSLSSCYVNCGFPQKG-----LNVFREMVLNGVKPDLVTMLSILHACS 455

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           ++  L+ GK +H   + +G+ +D+++  AL  +YAKC  ++ AQ VFD +  R V SW+ 
Sbjct: 456 DLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNG 515

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           ++  Y  + +      +F QM    +K +E+T+  ++  C  +  +EE    F  M+  G
Sbjct: 516 ILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMG 575

Query: 631 VEPD 634
            +PD
Sbjct: 576 FKPD 579



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 247/449 (55%), Gaps = 12/449 (2%)

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           +E +K++ S    G++PD    +++A+AC         +  H    R  +  D  +GN+F
Sbjct: 22  NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I  Y KC  +  A R F  +  R   +W ++ +CY   G+ Q+ L  F KM   K + N 
Sbjct: 82  IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T+ ++L  C+ L  L+ GK +H  ++R GM  E  ++  A + FYA+C  + E + V  
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGM-VEDVFVSSAFVNFYAKCLCVREAQTVFD 200

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  R++++WN L S Y   G  ++ L +  +M   G+ PD  +V+  LSAC ++  L+ 
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI----- 471
           G  IHG  +K    ++ FV ++L+++Y  C     A  +F+ +  ++V+ WNS+      
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
           CGF Q G     +N+F +M LN ++ D +   + + ACS +  L+ GK +H   + +G+ 
Sbjct: 321 CGFPQKG-----LNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMV 375

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           +D+++ TAL ++YA C  ++ AQ VFD M  RNVV+W+++  CY   G      ++F++M
Sbjct: 376 EDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREM 435

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           + +G+KP+ VT ++IL ACS    ++ GK
Sbjct: 436 VLNGVKPDLVTMLSILHACSDLQDLKSGK 464



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 193/386 (50%), Gaps = 13/386 (3%)

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           +P+    + V  +CA      + K  H    R G+  +   +G A I  Y +C  +    
Sbjct: 37  KPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVS-IGNAFIHAYGKCKCVEGAR 95

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V   +  R++++WN L + Y   G  ++ L +  +M    +  +  +V+S L  C ++ 
Sbjct: 96  RVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQ 155

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI- 471
            L+ G +IHG V++    +D FV S+ ++ Y+KC     A  +F+ +  + VV WNS+  
Sbjct: 156 DLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSS 215

Query: 472 ----CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
               CGF Q G     +N+F +M L+ ++ D VT    + ACS++  L+ GK +H   + 
Sbjct: 216 CYVNCGFPQKG-----LNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
           +G+ +++++  AL ++Y  C  ++ AQ VFD M  RNV++W+++  CY   G      ++
Sbjct: 271 HGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNV 330

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
           F++M  +G+KP+ +   +IL ACS    ++ GK         G+  D+     +V+L + 
Sbjct: 331 FREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYAN 390

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGAL 673
              +  A  +   MP   N   W +L
Sbjct: 391 CLCVREAQTVFDLMPH-RNVVTWNSL 415


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 247/754 (32%), Positives = 412/754 (54%), Gaps = 39/754 (5%)

Query: 1   MPL-FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           +PL  ++C     + R   +H  +  T L  D    T +++ Y + G +  +R VFD   
Sbjct: 63  LPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS 122

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D  +W  ++  Y+    +EE++LL  +M RE    ++    ++L AC    +L  G  
Sbjct: 123 DRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRG 182

Query: 117 VHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKV---FDKMTSRDVVSWSSIIASYF 172
           VHG  ++ G FD +  + T+++  Y  F    D R +   FD M  R++VSW+++I+ Y+
Sbjct: 183 VHGYCLRNGMFDSNPHVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYY 238

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           D  D  + L++F  M+ + V+ D VTML   +AC EL SL+  + IH   ++ +   D  
Sbjct: 239 DVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLY 298

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + N+ + MYS  G L S+ + F  +  R    W +MIS Y   G  ++A++ F++M    
Sbjct: 299 ILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEG 358

Query: 293 EEPNLITLITVLGSCAGLG-WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
            + +  T++ +L  C  L   L +GKS+H  +I+ GM  +   LG AL+  Y E   +  
Sbjct: 359 VKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS-LGNALLSMYTELNCVES 417

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            +K+   +   +I+SWN +I   AR  +  +A EL  +M+   + P+S+++ S L+AC +
Sbjct: 418 VQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACED 477

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           V  L  G  IHG+V+K   + ++ ++++L DMY  CG +  A  LFE    + ++ WN+M
Sbjct: 478 VTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAM 537

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG- 529
           I                        E + VT +  + + +++  L +G+ +H  +   G 
Sbjct: 538 IXK---------------------AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGF 576

Query: 530 -VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            +  D+ +  A   MYA+CG LQ+A+ +F ++ +RN++SW+AMI  YGM+G+ +DA   F
Sbjct: 577 SLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAF 636

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSR 647
            QML+ G +PN VTF+++L ACSHSG +E G   F++M + F V P+L HY+C+VDLL+R
Sbjct: 637 SQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLAR 696

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
            G I+ A + I SMP   + S+W ALL+ CR +      KTI ++L      + G Y LL
Sbjct: 697 GGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLL 756

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           SN+YA  G W E  ++R+ ++  GL+K PG S I
Sbjct: 757 SNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 790



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 176/629 (27%), Positives = 315/629 (50%), Gaps = 29/629 (4%)

Query: 59  DSFMWAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           D   W  +IK +  N   +++IL  Y +M       +N   P VL+AC++   +  G+ +
Sbjct: 24  DPKHWNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 82

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  I       D  + T+++  Y + G ++DAR VFD M+ RDVV W++++  Y      
Sbjct: 83  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 142

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E + +   M RE + P+  TM++L  AC     LR  R +HG+ LR  +    P   + 
Sbjct: 143 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 202

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           ++ +    D+      F  +  R   SW AMIS Y   G + KALE FV+ML  + + + 
Sbjct: 203 LIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDC 262

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T++  + +CA LG L+ GK +H Q+  K    E  Y+  AL+  Y+  G +    ++  
Sbjct: 263 VTMLVAVQACAELGSLKLGKQIH-QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFE 321

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS-LQ 416
           ++  R+   WN +IS YA  G  +EA++L ++MQ+ G+  D  +V   LS C  + S L 
Sbjct: 322 SVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLL 381

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G  +H HVIK   + D  + ++L+ MY++         +F+R++   ++ WN+MI    
Sbjct: 382 KGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA 441

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           +N    +A  LF +M  + ++ +  T ++ + AC ++  L+ G+ +H  ++ + +  +  
Sbjct: 442 RNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQP 501

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + TAL DMY  CGD  TA+ +F+   +R+++SW+AMI                       
Sbjct: 502 LRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI---------------------XK 540

Query: 596 IKPNEVTFMNILWACSHSGSVEEGK--FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            +PN VT +N+L + +H  ++ +G+    +   R F +  DL      + + +R G ++ 
Sbjct: 541 AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQS 600

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           A  +  ++P   N   W A++ G  ++ R
Sbjct: 601 AENIFKTLP-KRNIISWNAMIAGYGMNGR 628



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 246/510 (48%), Gaps = 3/510 (0%)

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           K+  +D   W+S+I    +  +    L  +  M   GV P+  T+  + +AC    ++  
Sbjct: 19  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 78

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            +SIH  +    +  D  +G + +  Y KCG +  A   F  +  R    W AM+  Y  
Sbjct: 79  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G +++A+    +M      PN  T++ +L +C G   LR G+ VH   +R GM     +
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 198

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  ALI FY     M     +   +  RNI+SWN +IS Y   G   +ALEL VQM    
Sbjct: 199 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 257

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAY 453
           +  D  ++  ++ AC  +GSL+LG QIH   IK +  +D ++ ++L++MYS  G    ++
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            LFE +  +   +WNSMI  +   G   EA++LF +M    ++ DE T +  +  C  + 
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 377

Query: 514 Q-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L KGK +H  +I  G+R D  +  AL  MY +   +++ Q++FD M   +++SW+ MI
Sbjct: 378 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 437

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
                +     A  LF++M +S IKPN  T ++IL AC     ++ G+     +    +E
Sbjct: 438 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 497

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            +      + D+    GD   A  +    P
Sbjct: 498 INQPLRTALADMYMNCGDEATARDLFEGCP 527


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/647 (34%), Positives = 371/647 (57%), Gaps = 5/647 (0%)

Query: 98   YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
            Y S+L+ C+    L  G+ VH  I   G   + V+   ++  Y   G L + R++FD + 
Sbjct: 454  YSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHIL 513

Query: 158  SRD-VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
            S + V  W+ +++ Y    D  E + +F  M + G+  +  T   + +    L  +   +
Sbjct: 514  SDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECK 573

Query: 217  SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
             IHG V +        + NS I  Y K G++ SA + F ++  R   SW +MIS    +G
Sbjct: 574  RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633

Query: 277  WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            +   ALE FV+ML ++   +L TL+  + +CA +G L  G+++H Q ++     E  +  
Sbjct: 634  FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF-N 692

Query: 337  PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
              L++ Y++CG +++  +    +G++ ++SW  LI+ Y R+G+  +A+ L  +M++ G+ 
Sbjct: 693  NTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS 752

Query: 397  PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
            PD +S+ S L AC    SL  G  +H ++ K +      V ++L+DMY+KCG    AYL+
Sbjct: 753  PDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLV 812

Query: 456  FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
            F +I  K +V WN+MI G+ +N    EA+ LF +M       D +T    + AC ++  L
Sbjct: 813  FSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAAL 871

Query: 516  EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
            E G+ +H  ++  G   ++++  AL DMY KCG L  A+ +FD + E+++++W+ MI   
Sbjct: 872  EIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGC 931

Query: 576  GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
            GMHG  N+A + F++M  +GIKP+E+TF +IL+ACSHSG + EG  +FN+M     +EP 
Sbjct: 932  GMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPK 991

Query: 635  LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
            L+HYACMVDLL+R+G++  A+ +I +MP   + +IWGALL GCRIH  +++ + + + + 
Sbjct: 992  LEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVF 1051

Query: 695  VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                ++ GYY LL+NIYAE   W+E  K+R  +   GLKK PG S I
Sbjct: 1052 ELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWI 1098



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 178/602 (29%), Positives = 319/602 (52%), Gaps = 8/602 (1%)

Query: 10   LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKEPDSFMWAVLIK 68
            L++   +H+ +   G+  +     +L+  Y   G+LR  R +FD    +   F+W +++ 
Sbjct: 467  LQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMS 526

Query: 69   CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             Y     + ESI L+ KM +   T +++ +  +L+  ++LG +G  +++HG + K GF  
Sbjct: 527  EYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGS 586

Query: 129  DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             + +  S++ TY + G +D A K+FD++  RDVVSW+S+I+    N      L+ F  M+
Sbjct: 587  YNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQML 646

Query: 189  REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
               V  D  T+++   AC  + SL   R++HG  ++     +    N+ + MYSKCG+L 
Sbjct: 647  ILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLN 706

Query: 249  SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
             A + F K+ ++   SWT++I+ Y R G +  A+  F +M      P++ ++ +VL +CA
Sbjct: 707  DAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACA 766

Query: 309  GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
                L +G+ VH   IRK        +  AL++ YA+CG M E   V   I  ++I+SWN
Sbjct: 767  CGNSLDKGRDVH-NYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWN 825

Query: 369  MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
             +I  Y++  +  EAL+L  +MQ     PD  ++A  L ACG++ +L++G  IHG +++ 
Sbjct: 826  TMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRN 884

Query: 429  DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
                E  V ++LIDMY KCG    A LLF+ I +K ++ W  MI G   +G   EAI  F
Sbjct: 885  GYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATF 944

Query: 488  HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY-GVRKDIYIDTALTDMYAK 546
             +M +  ++ DE+TF + + ACS+ G L +G    + +IS   +   +     + D+ A+
Sbjct: 945  QKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLAR 1004

Query: 547  CGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
             G+L  A  + ++M  + +   W A++    +H  +  A  + + + +  ++P+   +  
Sbjct: 1005 TGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFE--LEPDNAGYYV 1062

Query: 606  IL 607
            +L
Sbjct: 1063 LL 1064



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 248/490 (50%), Gaps = 5/490 (1%)

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           E D     S+ + C E   L+  + +H  +    I I+G LG   + MY  CG L    R
Sbjct: 448 ELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRR 507

Query: 253 TFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
            F  I        W  M+S Y + G +++++  F KM ++    N  T   +L   A LG
Sbjct: 508 IFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLG 567

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            + E K +H  + + G G  Y+ +  +LI  Y + G++    K+   +G+R+++SWN +I
Sbjct: 568 RVGECKRIHGCVYKLGFGS-YNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMI 626

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S     G S  ALE  VQM    +  D  ++ +S++AC NVGSL LG  +HG  +K    
Sbjct: 627 SGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFS 686

Query: 432 DEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            E +  ++L+DMYSKCG  N A   FE++ QK+VV W S+I  + + G   +AI LF++M
Sbjct: 687 REVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEM 746

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               +  D  +  + + AC+    L+KG+ VH+ +    +   + +  AL DMYAKCG +
Sbjct: 747 ESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSM 806

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           + A  VF  +  +++VSW+ MI  Y  +   N+A  LF +M     +P+ +T   +L AC
Sbjct: 807 EEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPAC 865

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
               ++E G+     +   G   +L     ++D+  + G +  A +++  M    +   W
Sbjct: 866 GSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHA-RLLFDMIPEKDLITW 924

Query: 671 GALLNGCRIH 680
             +++GC +H
Sbjct: 925 TVMISGCGMH 934



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 239/477 (50%), Gaps = 7/477 (1%)

Query: 1    MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            +  F +   + +  R+H  +   G          LI +Y + G + S+  +FD   + D 
Sbjct: 560  LKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDV 619

Query: 61   FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
              W  +I   + N F   ++  + +M+  +  +      + + AC+++G L  G  +HG+
Sbjct: 620  VSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQ 679

Query: 121  IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
             +K  F ++ +   ++L  Y + G L+DA + F+KM  + VVSW+S+IA+Y       + 
Sbjct: 680  GVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDA 739

Query: 181  LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            +++F+ M  +GV PD  +M S+  AC    SL   R +H ++ +  + +  P+ N+ + M
Sbjct: 740  IRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDM 799

Query: 241  YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            Y+KCG +  A   F +I  +   SW  MI  Y+++    +AL+ F +M + +  P+ IT+
Sbjct: 800  YAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITM 858

Query: 301  ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
              +L +C  L  L  G+ +H  I+R G   E  ++  ALI+ Y +CG +     +   I 
Sbjct: 859  ACLLPACGSLAALEIGRGIHGCILRNGYSSEL-HVANALIDMYVKCGSLVHARLLFDMIP 917

Query: 361  ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            E+++++W ++IS     G+  EA+    +M+  G+ PD  +  S L AC + G L  G  
Sbjct: 918  EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWG 977

Query: 421  IHGHVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICG 473
                +I  +C  E      + ++D+ ++ G  + AY L E +  K    +W +++CG
Sbjct: 978  FFNSMIS-ECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCG 1033



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 211/399 (52%), Gaps = 6/399 (1%)

Query: 282 LESFVKMLEV--KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           L + V++L +  K E +L    ++L  CA    L+EGK VH  I   G+ P    LG  L
Sbjct: 434 LRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGI-PIEGVLGAKL 492

Query: 340 IEFYAECGKMSECEKVI-HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           +  Y  CG + E  ++  H + +  +  WN+++SEYA+ G  +E++ L  +MQ  G+  +
Sbjct: 493 VFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGN 552

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFE 457
           S++ +  L     +G +    +IHG V K+       V +SLI  Y K G  + A+ LF+
Sbjct: 553 SYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFD 612

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +  + VV WNSMI G   NG S  A+  F QM +  + +D  T + ++ AC+N+G L  
Sbjct: 613 ELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSL 672

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H + +     +++  +  L DMY+KCG+L  A + F+ M ++ VVSW+++I  Y  
Sbjct: 673 GRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVR 732

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
            G  +DA  LF +M   G+ P+  +  ++L AC+   S+++G+   N +R   +   L  
Sbjct: 733 EGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPV 792

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              ++D+ ++ G +E A+ +   +P     S W  ++ G
Sbjct: 793 SNALMDMYAKCGSMEEAYLVFSQIPVKDIVS-WNTMIGG 830


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/744 (31%), Positives = 401/744 (53%), Gaps = 6/744 (0%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LFR+C++   +++  ++H  ++V G+      S+R++  Y   G +     +F   +  +
Sbjct: 50  LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCN 109

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I+      +F+ ++L Y KM+    +   + +P V++AC  L ++     VH 
Sbjct: 110 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHN 169

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
                GF  D  + ++++  Y + G + DAR+VFD++  RD + W+ ++  Y  + D + 
Sbjct: 170 TARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNN 229

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  M       + VT   +   C           +HG V+    + D  + N+ + 
Sbjct: 230 AMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVA 289

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG+L  A + F  + +  T +W  +I+ Y ++G+  +A   F  M+    +P+ +T
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 349

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + L S    G LR  K VH  I+R  + P   YL  ALI+ Y + G +    K+    
Sbjct: 350 FASFLPSILESGSLRHCKEVHSYIVRHRV-PFDVYLKSALIDIYFKGGDVEMARKIFQQN 408

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              ++     +IS Y   G++ +A+     +   G++P+S ++AS L AC  + +L+LG 
Sbjct: 409 TLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGK 468

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           ++H  ++K   ++   V S++ DMY+KCG  +LAY  F R+ +   + WNSMI  F QNG
Sbjct: 469 ELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNG 528

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
               A++LF QM ++  + D V+  +A+ + +N+  L  GK +H  +I      D ++ +
Sbjct: 529 KPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVAS 588

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMY+KCG L  A+ VF+ M+ +N VSW+++I  YG HG   +   LF +ML +G+ P
Sbjct: 589 ALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHP 648

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + VTF+ I+ AC H+G V EG  YF+ M R +G+   ++HYACMVDL  R+G +  AF  
Sbjct: 649 DHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDA 708

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I SMPF  +  +WG LL  CR+H  +++ K   + L      ++GYY LLSN++A+ G W
Sbjct: 709 IKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEW 768

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
               KVR +M+  G++K+PGYS I
Sbjct: 769 GSVLKVRRLMKEKGVQKIPGYSWI 792



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 248/500 (49%), Gaps = 4/500 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+ RACS    +    +VH +II  G      + + +L  Y   G + D   +F  +   
Sbjct: 49  SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           + + W+ +I   +        L  +  M+   V PD  T   + +ACG L ++     +H
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
                    +D  +G++ I +Y+  G +  A R F ++ +R T  W  M+  Y +SG F 
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPA 338
            A+ +F  M       N +T   +L  CA  G    G  VH  +I  G G E+D  +   
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVI--GSGFEFDPQVANT 286

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L+  Y++CG + +  K+ + + + + ++WN LI+ Y + G + EA  L   M + G+ PD
Sbjct: 287 LVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
           S + AS L +    GSL+   ++H ++++     D +++S+LID+Y K G   +A  +F+
Sbjct: 347 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQ 406

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           +     V +  +MI G+  +G +++AIN F  +    +  + +T  + + AC+ +  L+ 
Sbjct: 407 QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKL 466

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  ++   +   + + +A+TDMYAKCG L  A   F  MSE + + W++MI  +  
Sbjct: 467 GKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQ 526

Query: 578 HGQLNDAASLFKQMLDSGIK 597
           +G+   A  LF+QM  SG K
Sbjct: 527 NGKPEMAVDLFRQMGMSGAK 546



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 206/424 (48%), Gaps = 7/424 (1%)

Query: 272 YNRSGWFQKALESFVKMLEVKEEPN---LITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           ++RS     A  S    +  K E        L ++  +C+    +++ + VH QII  GM
Sbjct: 16  FSRSKLMHTAGTSICNNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGM 75

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             +   L   ++  Y  CG++S+   +   +   N L WN +I      G    AL    
Sbjct: 76  S-DVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYF 134

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG 447
           +M    + PD ++    + ACG + ++ L + +H     +    D FV S+LI +Y+  G
Sbjct: 135 KMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNG 194

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
           +   A  +F+ + Q+  ++WN M+ G+ ++G+   A+  F  M  +   ++ VT+   + 
Sbjct: 195 YICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILS 254

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            C+  G+   G  VH  +I  G   D  +   L  MY+KCG+L  A+++F++M + + V+
Sbjct: 255 ICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVT 314

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+ +I  Y  +G  ++AA LF  M+ +G+KP+ VTF + L +   SGS+   K   + + 
Sbjct: 315 WNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIV 374

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK-RIDVM 686
              V  D+   + ++D+  + GD+E A K+        + ++  A+++G  +H   ID +
Sbjct: 375 RHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTL-VDVAVCTAMISGYVLHGLNIDAI 433

Query: 687 KTIE 690
            T  
Sbjct: 434 NTFR 437



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 201/448 (44%), Gaps = 36/448 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +LR    +H++++   + +D    + LI+ Y + G +  +R +F      D 
Sbjct: 354 LPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDV 413

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +   +I  Y+ +    ++I  +  +I+E    ++    SVL AC++L  L  G+++H  
Sbjct: 414 AVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCD 473

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K   +    + ++I   Y + G LD A + F +M+  D + W+S+I+S+  N      
Sbjct: 474 ILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMA 533

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G + D V++ S   +   L +L   + +HG+V+R     D  + ++ I M
Sbjct: 534 VDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDM 593

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG L  A   F  +  +   SW ++I+ Y   G  ++ L+ F +ML     P+ +T 
Sbjct: 594 YSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTF 653

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++ +C   G + EG    HC     G+G        A +E YA               
Sbjct: 654 LVIISACGHAGLVGEGIHYFHCMTREYGIG--------ARMEHYA--------------- 690

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                     ++  Y R G   EA + +  M      PD+    + L AC   G+++L  
Sbjct: 691 ---------CMVDLYGRAGRLHEAFDAIKSMP---FTPDAGVWGTLLGACRLHGNVELAK 738

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
               H++++D K+      L ++++  G
Sbjct: 739 LASRHLLELDPKNSGYYVLLSNVHADAG 766


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/744 (30%), Positives = 390/744 (52%), Gaps = 7/744 (0%)

Query: 4   FRSCT-NLRK---LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
            R+C  N R+   +  +HA  +  GL         LI+ Y++ G +  +R VF+     D
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD 107

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  ++  Y  N   EE++ LY +M R     + ++  SVL +C+       G  +H 
Sbjct: 108 NVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHA 167

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +  K GF  +  +  +++  Y   G    A +VF  M  RD V+++++I+ +        
Sbjct: 168 QGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEH 227

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M   G+ PD VT+ SL  AC  L  L+    +H ++ +  I  D  +  S + 
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD 287

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KCGD+ +A   F   ++     W  M+  + +     K+ E F +M      PN  T
Sbjct: 288 LYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFT 347

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L +C     +  G+ +H   ++ G   +  Y+   LI+ Y++ G + +  +V+  +
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDM-YVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++++SW  +I+ Y +    K+AL    +MQ  G+ PD+  +AS++S C  + +++ GL
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 420 QIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH  + +     D  + ++L+++Y++CG    A+  FE ++ K  +  N ++ GF Q+G
Sbjct: 467 QIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSG 526

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA+ +F +M  + ++ +  TF++A+ A +N+ ++++GK +H ++I  G   +  +  
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN 586

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  +Y KCG  + A+  F  MSERN VSW+ +I     HG+  +A  LF QM   GIKP
Sbjct: 587 ALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKP 646

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N+VTF+ +L ACSH G VEEG  YF +M   +G+ P   HYAC++D+  R+G ++ A K 
Sbjct: 647 NDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKF 706

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MP  A+  +W  LL+ C++HK I+V +   K L     +D+  Y LLSN YA    W
Sbjct: 707 IEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKW 766

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
               +VR +M   G++K PG S I
Sbjct: 767 ANRDQVRKMMRDRGVRKEPGRSWI 790



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 165/622 (26%), Positives = 304/622 (48%), Gaps = 18/622 (2%)

Query: 82  LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK------VHGRIIKCGFDKDDVIQTS 135
           L+    R+   +    +   LRAC      G+G +      +H + +  G  K  ++   
Sbjct: 28  LFADKARQHGGLGPLDFACALRACR-----GNGRRWQVVPEIHAKAVTRGLGKYRIVGNL 82

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +  AR+VF+++++RD VSW ++++ Y  N    E L ++  M R GV P 
Sbjct: 83  LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S+  +C +       R IH    +     +  +GN+ I +Y +CG    AER F 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R T ++  +IS + + G  + ALE F +M      P+ +T+ ++L +CA LG L++
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  +H  + + G+  +Y   G +L++ Y +CG +     + ++    N++ WN+++  + 
Sbjct: 263 GTQLHSYLFKAGISSDYIMEG-SLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           +     ++ EL  QMQ  G+ P+ F+    L  C     + LG QIH   +K   + D +
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V   LIDMYSK G+   A  + E +++K VV W SMI G+ Q+    +A+  F +M    
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  D +   +AI  C+ I  + +G  +H ++   G   D+ I  AL ++YA+CG ++ A 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             F+ M  ++ ++ + ++  +   G   +A  +F +M  SG+K N  TF++ L A ++  
Sbjct: 502 SSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            +++GK     +   G   + +    ++ L  + G  E A KM  S     N   W  ++
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA-KMEFSEMSERNEVSWNTII 620

Query: 675 NGCRIHKR----IDVMKTIEKE 692
             C  H R    +D+   ++KE
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKE 642



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+CT  R++    ++H+  + TG   D   S  LI+ Y++ G L  +R V +  KE D
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ +   ++++  + +M +      N    S +  C+ +  +  G ++H 
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI   G+  D  I  +++  Y   G + +A   F++M  +D ++ + +++ +  +    E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEE 530

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F  M + GV+ +  T +S   A   L  ++  + IH  V++     +  +GN+ I 
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KCG    A+  F ++ +R   SW  +I+  ++ G   +AL+ F +M +   +PN +T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            I VL +C+ +G + EG S    +  + G+ P  D+    +I+ +   G++   +K I  
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA-CVIDIFGRAGQLDRAKKFIEE 709

Query: 359 IG-ERNILSWNMLIS 372
           +    + + W  L+S
Sbjct: 710 MPIAADAMVWRTLLS 724


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/736 (32%), Positives = 392/736 (53%), Gaps = 11/736 (1%)

Query: 15  RLHAHLLVTGLHYDPPA---STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +LHAH + TG   D  A   +T+L+  Y + G L  +  +FD       F W  LI   +
Sbjct: 76  QLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACL 135

Query: 72  WNNFFEESILLYHKMIREQ----ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
            +    E++ +Y  M   +    A        SVL+AC + GD   G +VHG  +K G D
Sbjct: 136 SSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLD 195

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           +  ++  +++  Y + G LD A +VF+ M   RDV SW+S I+    N    E L +F  
Sbjct: 196 RSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRR 255

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M  +G   +  T + + + C EL  L   R +H  +L+   + +    N+ +VMY++CG 
Sbjct: 256 MQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGW 314

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + SA R F +I  +   SW +M+SCY ++  + +A++ F +M++    P+   ++++L +
Sbjct: 315 VDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSA 374

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
              LG L  G+ VH   +++ +  +   +   L++ Y +C  +    +V   +  ++ +S
Sbjct: 375 VGHLGRLINGREVHAYAVKQRLDSDLQ-IANTLMDMYIKCYSVECSARVFDRMRIKDHVS 433

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  +I+ YA+     EA+      Q  G+  D   + S L AC  + S+ L  Q+H + I
Sbjct: 434 WTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAI 493

Query: 427 KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
           +    D  +++ +ID+Y +CG    A  +FE + +K +V W SM+  F +NG   EA+ L
Sbjct: 494 RNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVAL 553

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F +M    ++ D V  +  + A + +  L KGK +H  LI      +  + ++L DMY+ 
Sbjct: 554 FGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSG 613

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG +  A +VFD    ++VV W+AMI+  GMHG    A  +FK+ML++G+ P+ V+F+ +
Sbjct: 614 CGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLAL 673

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L+ACSHS  V+EGKFY + M   + ++P  +HYAC+VDLL RSG  E A+K I SMP   
Sbjct: 674 LYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEP 733

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
              +W ALL  CRIHK  ++      +L     ++ G Y L+SN++AE G W+   ++R+
Sbjct: 734 KSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRT 793

Query: 726 IMEVTGLKKVPGYSTI 741
            M   GL+K P  S I
Sbjct: 794 KMTEQGLRKDPACSWI 809



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 295/571 (51%), Gaps = 11/571 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVLIKCYMW 72
           + +H   + +GL      +  L+  YA+ G L S+  VF+  ++  D   W   I   + 
Sbjct: 183 SEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQ 242

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N  F E++ L+ +M  +  +++++    VL+ C+ L  L  G ++H  ++KCG + +  I
Sbjct: 243 NGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN--I 300

Query: 133 Q-TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           Q  ++L  Y   G +D A +VF ++  +D +SW+S+++ Y  N   +E +  F  MV+ G
Sbjct: 301 QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNG 360

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
             PD   ++SL  A G L  L   R +H + +++++  D  + N+ + MY KC  +  + 
Sbjct: 361 FNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSA 420

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R F ++  +   SWT +I+CY +S  + +A+  F    +   + + + + ++L +C+GL 
Sbjct: 421 RVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLK 480

Query: 312 WLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
            +   K VH   IR G+    D  L   +I+ Y ECG++     +   + +++I++W  +
Sbjct: 481 SISLLKQVHSYAIRNGL---LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSM 537

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           ++ +A  G+  EA+ L  +M   G+ PDS ++   L A   + SL  G +IHG +I+   
Sbjct: 538 VNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKF 597

Query: 431 KDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             E  V SSL+DMYS CG  N A  +F+  + K VV+W +MI     +G+  +AI +F +
Sbjct: 598 PVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKR 657

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCG 548
           M    +  D V+FL  + ACS+   +++GK+    ++S Y ++        + D+  + G
Sbjct: 658 MLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSG 717

Query: 549 DLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             + A +   SM  E   V W A++    +H
Sbjct: 718 QTEEAYKFIKSMPLEPKSVVWCALLGACRIH 748


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/744 (32%), Positives = 382/744 (51%), Gaps = 14/744 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +  +L     LH+HLL +GL      S  L+  Y+      ++R VFD   +P    W
Sbjct: 14  FGTSRSLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSW 71

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           + L+  Y  N    +++L +  M       + F  P VL+ C+   D+  G +VH   + 
Sbjct: 72  SSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP--DVRFGAQVHALAVA 128

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS----RDVVSWSSIIASYFDNADVSE 179
                D  +  +++  YG FG +D+AR++FD+       R+ VSW+++I++Y  N    +
Sbjct: 129 TRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGD 188

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  MV  G  P+      +  AC     L   R +HG V+R   + D    N+ + 
Sbjct: 189 AIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVD 248

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSK GD+  A   F K+      SW A IS     G   +ALE  ++M      PN+ T
Sbjct: 249 MYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFT 308

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L +VL +CAG G    G+ +H  ++ K +    +++   L++ YA+ G + +  KV   +
Sbjct: 309 LSSVLKACAGAGAFNLGRQIHGFMV-KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFM 367

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD--SFSVASSLSACGNVGSLQL 417
             R+++ WN LIS  +  G   E L L  +M+  GL  D    ++AS L +  +  ++  
Sbjct: 368 PRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICH 427

Query: 418 GLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
             Q+H    KI    D  V + LID Y KCG  + A  +F+  +   ++   +M+    Q
Sbjct: 428 TRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQ 487

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
             +  +AI LF QM    LE D     + + AC+++   E+GK VH  LI      D++ 
Sbjct: 488 CDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFA 547

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             AL   YAKCG ++ A   F  + ER +VSWSAMI     HG    A  LF +MLD G+
Sbjct: 548 GNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGV 607

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            PN +T  ++L AC+H+G V++ K YF +M+  FG++   +HYACM+D+L R+G +E A 
Sbjct: 608 APNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAM 667

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           +++++MPF AN ++WGALL   R+H+  ++ +   ++L       +G + LL+N YA  G
Sbjct: 668 ELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAG 727

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYS 739
            WDE  KVR +M+ + +KK P  S
Sbjct: 728 MWDEMAKVRKLMKDSNVKKEPAMS 751



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 296/588 (50%), Gaps = 11/588 (1%)

Query: 1   MPLFRSCT-NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF---- 55
           +P+   C  ++R   ++HA  + T L +D   +  L+  Y   G +  +R +FD +    
Sbjct: 106 LPVVLKCAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVG 165

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            E ++  W  +I  Y+ N+   ++I ++ +M+      + F +  V+ AC+   DL +G 
Sbjct: 166 GERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGR 225

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VHG +++ G++KD     +++  Y + G ++ A  VF+KM + DVVSW++ I+    + 
Sbjct: 226 QVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHG 285

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
                L++   M   G+ P+  T+ S+ +AC    +    R IHG +++     D  +  
Sbjct: 286 HDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAV 345

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE--VKE 293
             + MY+K G L  A + F  + +R    W A+IS  +  G   + L  F +M +  +  
Sbjct: 346 GLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDL 405

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           + N  TL +VL S A    +   + VH    + G+  +   +   LI+ Y +CG++    
Sbjct: 406 DVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVIN-GLIDSYWKCGQLDYAI 464

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV       +I+S   +++  ++    ++A++L VQM   GL PDSF ++S L+AC ++ 
Sbjct: 465 KVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLS 524

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           + + G Q+H H+IK     D F  ++L+  Y+KCG    A + F  + ++ +V W++MI 
Sbjct: 525 AYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIG 584

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVR 531
           G  Q+G+   A++LFH+M    +  + +T  + + AC++ G ++  K     +  ++G+ 
Sbjct: 585 GLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGID 644

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
           +       + D+  + G L+ A  + ++M  + N   W A++    +H
Sbjct: 645 RTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVH 692


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 243/733 (33%), Positives = 381/733 (51%), Gaps = 13/733 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTR--LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
             LHA LL +G      AS R  LI  Y++      +R  FD   +P    W+ L+  Y 
Sbjct: 24  AHLHASLLKSG----SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYS 79

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            N     +I  +H M  E    + F  P VL+    + D   G +VH   +  GF  D  
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVF 136

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           +  +++  YG FG +DDAR+VF++  S R+ VSW+ ++++Y  N    + +++F  MV  
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G++P       +  AC    ++   R +H  V+R     D    N+ + MY K G +  A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              F K+      SW A+IS    +G   +A+E  ++M      PN+ TL ++L +C+G 
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G    G+ +H  +I+     + DY+G  L++ YA+   + +  KV   +  R+++  N L
Sbjct: 317 GAFDLGRQIHGFMIKANADSD-DYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNAL 375

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
           IS  +  G   EAL L  +++  GL  +  ++A+ L +  ++ +     Q+H   +KI  
Sbjct: 376 ISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D  V + LID Y KC   + A  +FE      ++   SMI    Q  +   AI LF +
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    LE D     + + AC+++   E+GK VH  LI      D +   AL   YAKCG 
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGS 555

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A+  F S+ ER VVSWSAMI     HG    A  LF +M+D GI PN +T  ++L A
Sbjct: 556 IEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCA 615

Query: 610 CSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           C+H+G V+E K YFN+M+ +FG++   +HY+CM+DLL R+G ++ A ++++SMPF AN S
Sbjct: 616 CNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANAS 675

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           IWGALL   R+HK  ++ K   ++L +     +G + LL+N YA  G W+E  KVR +M+
Sbjct: 676 IWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMK 735

Query: 729 VTGLKKVPGYSTI 741
            + +KK P  S I
Sbjct: 736 DSNIKKEPAMSWI 748



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 288/584 (49%), Gaps = 8/584 (1%)

Query: 1   MPLFRSCTNLRKL-TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEP 58
           +P+   C    +L  ++HA  + TG   D   +  L+  Y   G +  +R VF+    E 
Sbjct: 106 LPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           ++  W  L+  Y+ N+   ++I ++ +M+      + F +  V+ AC+   ++ +G +VH
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +++ G+DKD     +++  Y + G +D A  +F+KM   DVVSW+++I+    N    
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             +++   M   G+ P+  T+ S+ +AC    +    R IHG +++     D  +G   +
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K   L  A + F  +  R      A+IS  +  G   +AL  F ++ +     N  
Sbjct: 346 DMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           TL  VL S A L      + VH   ++  +G  +D ++   LI+ Y +C  +S+  +V  
Sbjct: 406 TLAAVLKSTASLEAASTTRQVHALAVK--IGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                +I++   +I+  ++    + A++L ++M   GL PD F ++S L+AC ++ + + 
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+H H+IK     D F  ++L+  Y+KCG    A L F  + ++ VV W++MI G  Q
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIY 535
           +G+   A+ LF +M    +  + +T  + + AC++ G +++ K   + +   +G+ +   
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 643

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             + + D+  + G L  A  + +SM  + N   W A++    +H
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/645 (33%), Positives = 376/645 (58%), Gaps = 4/645 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           SVL+ C+    L  G++V   I   GF  D  + + +   Y   G L +A +VFD++   
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIE 158

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
             + W+ ++     + D S  + +F  M+  GVE D  T   ++++   L S+     +H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLH 218

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
           G++L+        +GNS +  Y K   + SA + F ++ +R   SW ++I+ Y  +G  +
Sbjct: 219 GYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           K L  FV+ML    E +L T+++V   CA    +  G++VHC  ++     E D     L
Sbjct: 279 KGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE-DRFCNTL 337

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           ++ Y++CG +   + V   +  R+++S+  +I+ YAR+G++ EA++L  +M+  G+ PD 
Sbjct: 338 LDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFER 458
           ++V + L+ C     L  G ++H  + + D   D FV ++L+DMY+KCG    A L+F  
Sbjct: 398 YTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSE 457

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEK 517
           ++ K ++ WN++I G+ +N  + EA++LF+ + +      DE T    + AC+++   +K
Sbjct: 458 MRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDK 517

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H  ++  G   D ++  +L DMYAKCG L  A+ +FD ++ +++VSW+ MI  YGM
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGM 577

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQ 636
           HG   +A +LF QM  +GI+P+E++F+++L+ACSHSG V+EG  +FN MR    +EP ++
Sbjct: 578 HGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYAC+VD+L+R+G++  A++ I +MP P + +IWGALL GCRIH  + + + + +++   
Sbjct: 638 HYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFEL 697

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + GYY L++NIYAE   W+E  ++R  +   GL+K PG S I
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWI 742



 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 183/555 (32%), Positives = 300/555 (54%), Gaps = 7/555 (1%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
            G   D    ++L   Y   G L+ +  VFD  K   +  W +L+     +  F  SI L
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           + KM+     + ++ +  V ++ SSL  +  GE++HG I+K GF + + +  S++  Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
              +D ARKVFD+MT RDV+SW+SII  Y  N    +GL +F  M+  G+E D  T++S+
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
              C +   +   R++H   ++     +    N+ + MYSKCGDL SA+  F ++  R  
Sbjct: 303 FAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSV 362

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            S+T+MI+ Y R G   +A++ F +M E    P++ T+  VL  CA    L EGK VH  
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEW 422

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I    MG +  ++  AL++ YA+CG M E E V   +  ++I+SWN +I  Y++   + E
Sbjct: 423 IKENDMGFDI-FVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANE 481

Query: 383 ALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLI 440
           AL L  + +      PD  +VA  L AC ++ +   G +IHG++++     D  V +SL+
Sbjct: 482 ALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMY+KCG   LA LLF+ I  K +V W  MI G+  +G   EAI LF+QM    +E DE+
Sbjct: 542 DMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEI 601

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID--TALTDMYAKCGDLQTAQRVFD 558
           +F++ + ACS+ G +++G W    ++ +  + +  ++    + DM A+ G+L  A R  +
Sbjct: 602 SFVSLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIE 660

Query: 559 SMS-ERNVVSWSAMI 572
           +M    +   W A++
Sbjct: 661 NMPIPPDATIWGALL 675



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 260/510 (50%), Gaps = 16/510 (3%)

Query: 150 RKVFDKMTS-----RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
           R V D+  S     R V   ++ +  + ++ ++   +K+ H   +  ++P   T+ S+ +
Sbjct: 45  RTVSDRADSITTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQ 102

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCT 262
            C +  SL+  + +   +      +D  LG+   +MY+ CGDL  A R F  VKIEK   
Sbjct: 103 LCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK--A 160

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
             W  +++   +SG F  ++  F KM+    E +  T   V  S + L  +  G+ +H  
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGY 220

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I++ G G E + +G +L+ FY +  ++    KV   + ER+++SWN +I+ Y   G++++
Sbjct: 221 ILKSGFG-ERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLI 440
            L + VQM   G+  D  ++ S  + C +   + LG  +H   +K     +D F  ++L+
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFC-NTLL 338

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMYSKCG  + A ++F  +  +SVV + SMI G+ + G + EA+ LF +M    +  D  
Sbjct: 339 DMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T    +  C+    L++GK VH  +    +  DI++  AL DMYAKCG ++ A+ VF  M
Sbjct: 399 TVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEM 458

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEVTFMNILWACSHSGSVEEG 619
             ++++SW+ +I  Y  +   N+A SLF  +L +    P+E T   +L AC+   + ++G
Sbjct: 459 RVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKG 518

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           +     +   G   D      +VD+ ++ G
Sbjct: 519 REIHGYIMRNGYFSDRHVANSLVDMYAKCG 548



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 237/477 (49%), Gaps = 10/477 (2%)

Query: 5   RSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           +S ++LR +    +LH ++L +G          L+  Y +   + S+R VFD   E D  
Sbjct: 203 KSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVI 262

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  Y+ N   E+ + ++ +M+     I      SV   C+    +  G  VH   
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFG 322

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K  F ++D    ++L  Y + G LD A+ VF +M+ R VVS++S+IA Y       E +
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAV 382

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           K+F  M  EG+ PD  T+ ++   C     L   + +H  +    +  D  + N+ + MY
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMY 442

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF-VKMLEVKEEPNLITL 300
           +KCG +  AE  F ++  +   SW  +I  Y+++ +  +AL  F + ++E +  P+  T+
Sbjct: 443 AKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTV 502

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             VL +CA L    +G+ +H  I+R G   +  ++  +L++ YA+CG +     +   I 
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLARLLFDDIT 561

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            ++++SW ++I+ Y   G  KEA+ L  QM+  G+ PD  S  S L AC + G +  G +
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWR 621

Query: 421 IHGHVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
              ++++ +CK E      + ++DM ++ G  + AY   E +       +W +++CG
Sbjct: 622 FF-NIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCG 677



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S +   K   +H +++  G   D   +  L++ YA+ G+L  +RL+FD     D 
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDL 565

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + F +E+I L+++M +         + S+L ACS  G +  G
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEG 619


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/633 (35%), Positives = 367/633 (57%), Gaps = 6/633 (0%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYF 172
           G+ +H +I+  G   +  +  S++  Y        A+ VF  + +  D+  W+ ++A+  
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273

Query: 173 DNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
            N    EGL++FH ++    ++PD  T  S+ +AC  L  +   + +H HV++    +D 
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + +S + MY+KC     A + F ++ +R   SW  +ISCY + G  +KALE F +M   
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +P+ +TL TV+ SCA L  L  GK +H +++R G   +  ++  AL++ Y +CG +  
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALD-GFVSSALVDMYGKCGCLEM 452

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            ++V   I  +N++SWN +I+ Y+ KG SK  +EL  +M   G+ P   +++S L AC  
Sbjct: 453 AKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR 512

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
             +LQLG  IHG++I+   + D FV SSLID+Y KCG    A  +F+ + + +VV WN M
Sbjct: 513 SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVM 572

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I G+ + G+ LEA+ +F  M    ++ D +TF + + ACS +  LEKGK +H+ +I   +
Sbjct: 573 ISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 632

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             +  +  AL DMYAKCG +  A  +F+ + ER+ VSW++MI  YG HGQ  +A  LF++
Sbjct: 633 EINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEK 692

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSG 649
           M  S  KP++VTF+ IL ACSH+G V+EG +YFN M   +G +P ++HY+C++DLL R G
Sbjct: 693 MQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVG 752

Query: 650 DIEGAFKMIHSMP-FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
            +  A++++   P    +  +   L + C +HK++D+ + I + L     +D   Y +LS
Sbjct: 753 RLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILS 812

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           N+YA    WDE  KVR  ++  GLKK PG S I
Sbjct: 813 NMYASVKKWDEVRKVRLKIKELGLKKNPGCSWI 845



 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 178/573 (31%), Positives = 311/573 (54%), Gaps = 7/573 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP-DSFMWAVLIKCYMWNN 74
           +H  ++  GL  +      LI  Y      +S++LVF T + P D  +W  L+     N 
Sbjct: 217 IHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNF 276

Query: 75  FFEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            F E + ++H+++         F YPSVL+ACS LG +G G+ VH  +IK GF  D V+ 
Sbjct: 277 IFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVM 336

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           +S +  Y +    +DA K+FD+M  RDV SW+++I+ Y+ +    + L++F  M   G +
Sbjct: 337 SSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFK 396

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD VT+ ++  +C  L  L   + IH  ++R    +DG + ++ + MY KCG L  A+  
Sbjct: 397 PDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEV 456

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +I+++   SW +MI+ Y+  G  +  +E F +M E    P L TL ++L +C+    L
Sbjct: 457 FEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNL 516

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           + GK +H  IIR  +  +  ++  +LI+ Y +CG +   E V   + + N++SWN++IS 
Sbjct: 517 QLGKFIHGYIIRNRVEADI-FVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISG 575

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           Y + G   EAL +   M+  G+ PD+ +  S L AC  +  L+ G +IH  +I+   + +
Sbjct: 576 YVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEIN 635

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           E V  +L+DMY+KCG  + A  +F ++ ++  V W SMI  +  +G + EA+ LF +M  
Sbjct: 636 EVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQ 695

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQ 551
           +  + D+VTFL  + ACS+ G +++G +  +++I+ YG +  +   + L D+  + G L+
Sbjct: 696 SDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLR 755

Query: 552 TAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLN 582
            A  +     +   +V   S +     +H +L+
Sbjct: 756 EAYEILQRTPDIREDVGLLSTLFSACHLHKKLD 788



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 208/445 (46%), Gaps = 36/445 (8%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC  L  L R   +H  L+ +G   D   S+ L++ Y + G L  ++ VF+  +  +
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN 464

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y      +  I L+ +M  E    +     S+L ACS   +L  G+ +HG
Sbjct: 465 VVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHG 524

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            II+   + D  + +S++  Y + G +  A  VF  M   +VVSW+ +I+ Y       E
Sbjct: 525 YIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLE 584

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M + GV+PD +T  S+  AC +L  L   + IH  ++  K++I+  +  + + 
Sbjct: 585 ALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLD 644

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  A   F ++ +R   SWT+MI+ Y   G   +AL+ F KM +   +P+ +T
Sbjct: 645 MYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVT 704

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            + +L +C+  G + EG     Q+I      EY +  PA +E Y+ C             
Sbjct: 705 FLAILSACSHAGLVDEGCYYFNQMI-----AEYGF-KPA-VEHYS-C------------- 743

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                     LI    R G  +EA E+L   +T  +  D   +++  SAC     L LG 
Sbjct: 744 ----------LIDLLGRVGRLREAYEIL--QRTPDIREDVGLLSTLFSACHLHKKLDLGE 791

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYS 444
           QI   +I+ D  D      L +MY+
Sbjct: 792 QIGRLLIEKDPDDPSTYIILSNMYA 816


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/656 (32%), Positives = 357/656 (54%), Gaps = 3/656 (0%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R+   + ++ Y  +L++C    DL  G++VH  I++CG   +  I  ++L  Y   G ++
Sbjct: 21  RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           +AR++FDK +++ VVSW+ +I+ Y       E   +F  M +E +EPD  T +S+  AC 
Sbjct: 81  EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
               L   R IH  V+   +  D  +GN+ I MY+KCG +  A R F  +  R   SWT 
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +   Y  SG+ +++L+++  ML+ +  P+ IT + VL +C  L  L +GK +H  I+   
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESE 260

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
              +   +  AL + Y +CG   +  +V   +  R++++WN +I  +   G  +EA    
Sbjct: 261 YHSDVR-VSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTF 319

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKC 446
            +M   G+ PD  +  + LSAC   G L  G +IH    K     D    ++LI+MYSK 
Sbjct: 320 HRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKA 379

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G    A  +F+R+ ++ VV W +++  +      +E+   F QM    ++ +++T++  +
Sbjct: 380 GSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVL 439

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
           +ACSN   L+ GK +H +++  G+  D+ +  AL  MY KCG ++ A RVF+ MS R+VV
Sbjct: 440 KACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVV 499

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           +W+ +I   G +G+  +A   ++ M   G++PN  TF+N+L AC     VEEG+  F  M
Sbjct: 500 TWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFM 559

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
            + +G+ P  +HYACMVD+L+R+G +  A  +I ++P   + ++WGALL  CRIH  +++
Sbjct: 560 SKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEI 619

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +   +        + G Y  LS IYA  G W +  K+R  M+  G+KK PG S I
Sbjct: 620 GERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWI 675



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 173/585 (29%), Positives = 292/585 (49%), Gaps = 9/585 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L +SC   + L    ++H H+L  G+  +   +  L++ YA  GS+  +R +FD F  
Sbjct: 32  VKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSN 91

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W V+I  Y      +E+  L+  M +E+     F + S+L ACSS   L  G ++
Sbjct: 92  KSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREI 151

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H R+++ G   D  +  +++  Y + G + DAR+VFD M SRD VSW+++  +Y ++   
Sbjct: 152 HVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYG 211

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E LK +H+M++E V P  +T +++  ACG L +L   + IH H++  +   D  +  + 
Sbjct: 212 EESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTAL 271

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
             MY KCG    A   F  +  R   +W  MI  +  SG  ++A  +F +MLE    P+ 
Sbjct: 272 TKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDR 331

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T  TVL +CA  G L  GK +H +  + G+  +  + G ALI  Y++ G M +  +V  
Sbjct: 332 ATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRF-GNALINMYSKAGSMKDARQVFD 390

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +R+++SW  L+  YA      E+     QM   G+  +  +    L AC N  +L+ 
Sbjct: 391 RMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKW 450

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH  V+K     D  V ++L+ MY KCG    A  +FE +  + VV WN++I G  Q
Sbjct: 451 GKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQ 510

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDI 534
           NG  LEA+  +  M    +  +  TF+  + AC     +E+G+      +S  YG+    
Sbjct: 511 NGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGR-RQFAFMSKDYGIVPTE 569

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
                + D+ A+ G L+ A+ V  ++  + +   W A++    +H
Sbjct: 570 KHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIH 614



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 134/237 (56%), Gaps = 1/237 (0%)

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMY 443
           ++L  +   G   DS+     L +C     L +G Q+H H+++   K   ++ ++L+ +Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           + CG  N A  LF++   KSVV WN MI G+   G + EA NLF  M    LE D+ TF+
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           + + ACS+   L  G+ +H +++  G+  D  +  AL  MYAKCG ++ A+RVFD+M+ R
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           + VSW+ +   Y   G   ++   +  ML   ++P+ +T+MN+L AC    ++E+GK
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGK 250


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/737 (30%), Positives = 391/737 (53%), Gaps = 13/737 (1%)

Query: 4   FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            + C   + L    ++H H+       D   +  LI  Y++ GS+  +  VF + ++ D 
Sbjct: 58  LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  +   +E++ L+++M RE    +   + S+L AC +   L  GE++H  
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSH 177

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I K G++ D  + T+++  Y + G L+ ARKVF++M  R+VVSW+++I+ Y  + D  E 
Sbjct: 178 ITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEA 237

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
             +F  ++R G +P+ V+  S+  AC     L     +H ++ +  ++ +  +GN+ I M
Sbjct: 238 FVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISM 297

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y++CG L +A + F  +      SW AMI+ Y   G+ ++A   F  M +   +P+  T 
Sbjct: 298 YARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRLFRDMQQKGFQPDRFTY 356

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            ++L  CA    L  GK +H QI+R     +   +  ALI  YA+CG + E  KV + + 
Sbjct: 357 ASLLAICADRADLNRGKELHSQIVRTAWEADVT-VATALISMYAKCGSLEEARKVFNQMP 415

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E+N +SWN  I+   R G  KEA ++  QM+   ++PD  +  + L++C +    + G  
Sbjct: 416 EKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRY 475

Query: 421 IHGHVIKID----CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           IHG   KID      +  V ++LI MY +CG    A  +F RI+++ +  WN+MI  + Q
Sbjct: 476 IHG---KIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQ 532

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G +  A +LF +      + D+ TF+  ++A +N+  L+ G+ +H  +   G+ KDI I
Sbjct: 533 HGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRI 592

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            T L  MY+KCG L+ A  VF ++ E++VV W+AM+  Y       DA  LF+QM   G+
Sbjct: 593 LTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGV 652

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            P+  T+ ++L AC+  G++E GK +   ++   +E D +HYACMV  L R+  ++ A +
Sbjct: 653 NPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGRASLLKEAEE 712

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKT-IEKELSVTGTNDNGYYTLLSNIYAEEG 715
            I  +   ++  +W +LL  CRIH  + + +T +E  L V   +       L NIYA  G
Sbjct: 713 FIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAG 772

Query: 716 NWDEFGKVRSIMEVTGL 732
            W++   +++ M   GL
Sbjct: 773 RWEDVSVIKATMREAGL 789



 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/623 (29%), Positives = 321/623 (51%), Gaps = 6/623 (0%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           NF Y   L+ C     L  G+KVH  +    F+ D  +   ++  Y + G ++DA  VF 
Sbjct: 52  NF-YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQ 110

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  +DVVSW+++I+ Y  +    E + +F+ M REG++P+  + +S+  AC     L  
Sbjct: 111 SMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEF 170

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              IH H+ +   + D  +  + I MY KCG L  A + F ++ +R   SWTAMIS Y +
Sbjct: 171 GEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 230

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G  ++A   F K++    +PN ++  ++LG+C     L +G  +H  I + G+  E   
Sbjct: 231 HGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEV-L 289

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G ALI  YA CG ++   +V   +   N +SWN +I+ Y  +G  +EA  L   MQ  G
Sbjct: 290 VGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRLFRDMQQKG 348

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
             PD F+ AS L+ C +   L  G ++H  +++   + D  V ++LI MY+KCG    A 
Sbjct: 349 FQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEAR 408

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F ++ +K+ V WN+ I    ++G+  EA  +F QM  + +  D VTF+T + +C++  
Sbjct: 409 KVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPE 468

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
             E+G+++H K+  +G+  +  +  AL  MY +CG L  A+ VF  +  R++ SW+AMI 
Sbjct: 469 DFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIA 528

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y  HG    A  LF +    G K ++ TF+N+L A ++   ++ G+     +   G+E 
Sbjct: 529 AYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEK 588

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           D++    ++ + S+ G +  A+ +  ++    +   W A+L              + +++
Sbjct: 589 DIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAMLAAYNHSDHGQDALKLFQQM 647

Query: 694 SVTGTN-DNGYYTLLSNIYAEEG 715
            + G N D+  YT + N  A  G
Sbjct: 648 RLEGVNPDSATYTSVLNACARLG 670



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 165/548 (30%), Positives = 271/548 (49%), Gaps = 5/548 (0%)

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           + GV+ +        + C +  SL   + +H H+   + + D  L N  I MYSKCG + 
Sbjct: 44  KRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIE 103

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F  +E +   SW AMIS Y   G  Q+A++ F +M     +PN  + I++L +C 
Sbjct: 104 DANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQ 163

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               L  G+ +H  I + G   + + +  ALI  Y +CG +    KV + + ERN++SW 
Sbjct: 164 TPIVLEFGEQIHSHITKAGYESDVN-VSTALINMYCKCGSLELARKVFNEMRERNVVSWT 222

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +IS Y + G SKEA  L  ++   G  P+  S AS L AC N   L+ GL++H ++ + 
Sbjct: 223 AMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQA 282

Query: 429 DCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
             + E  V ++LI MY++CG    A  +F+ ++  + V WN+MI G Y  G   EA  LF
Sbjct: 283 GLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAG-YGEGFMEEAFRLF 341

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M     + D  T+ + +  C++   L +GK +H +++      D+ + TAL  MYAKC
Sbjct: 342 RDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKC 401

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G L+ A++VF+ M E+N VSW+A I C   HG   +A  +FKQM    + P+ VTF+ +L
Sbjct: 402 GSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLL 461

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            +C+     E G++    +  +G+  +      ++ +  R G +  A ++ + +     G
Sbjct: 462 NSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLG 521

Query: 668 SIWGALLNGCRIH-KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
           S W A++     H           K  S  G  D   +  +    A   + D   K+  +
Sbjct: 522 S-WNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGL 580

Query: 727 MEVTGLKK 734
           +E  GL+K
Sbjct: 581 VEKAGLEK 588


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/653 (32%), Positives = 361/653 (55%), Gaps = 3/653 (0%)

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
           + + ++ Y  +L++C    DL  G++VH  I++ G   +  I  ++L  Y   G +++AR
Sbjct: 40  SQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEAR 99

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           ++FDK +++ VVSW+ +I+ Y       E   +F  M +EG+EPD  T +S+  AC    
Sbjct: 100 RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           +L   R +H  V+   +  +  +GN+ I MY+KCG +  A R F  +  R   SWT +  
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y  SG+ Q++L+++  ML+    P+ IT + VL +C  L  L +GK +H QI+      
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS 279

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +   +  AL + Y +CG + +  +V   +  R++++WN +I      G  +EA  +  +M
Sbjct: 280 DVR-VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRM 338

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
               + PD  +  + LSAC   G L  G +IH   +K     D    ++LI+MYSK G  
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSM 398

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A  +F+R+ ++ VV W +++ G+   G  +E+ + F +M    +E +++T++  ++AC
Sbjct: 399 KDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC 458

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           SN   L+ GK +H +++  G+  D+ +  AL  MY KCG ++ A RV + MS R+VV+W+
Sbjct: 459 SNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWN 518

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI- 628
            +I     +G+  +A   F+ M    ++PN  TF+N++ AC     VEEG+  F +MR  
Sbjct: 519 TLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKD 578

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           +G+ P  +HYACMVD+L+R+G +  A  +I +MPF  + ++WGALL  CR H  +++ + 
Sbjct: 579 YGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQ 638

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             ++       + G Y  LS IYA  G W +  K+R +M+  G+KK PG S I
Sbjct: 639 AAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWI 691



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 172/598 (28%), Positives = 292/598 (48%), Gaps = 7/598 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L +SC   + L    ++H H+L  G+  +      L++ Y   GS+  +R +FD F  
Sbjct: 48  VKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSN 107

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W V+I  Y      +E+  L+  M +E      F + S+L ACSS   L  G +V
Sbjct: 108 KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREV 167

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H R+++ G   +  +  +++  Y + G + DAR+VFD M SRD VSW+++  +Y ++   
Sbjct: 168 HVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYA 227

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E LK +H+M++EGV P  +T +++  ACG L +L   + IH  ++  +   D  +  + 
Sbjct: 228 QESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTAL 287

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
             MY KCG +  A   F  +  R   +W  MI     SG  ++A   F +ML+    P+ 
Sbjct: 288 TKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDR 347

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T + +L +CA  G L  GK +H + ++ G+  +  + G ALI  Y++ G M +  +V  
Sbjct: 348 VTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF-GNALINMYSKAGSMKDARQVFD 406

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +R+++SW  L+  YA  G   E+     +M   G+  +  +    L AC N  +L+ 
Sbjct: 407 RMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKW 466

Query: 418 GLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH  V+K     D  V ++L+ MY KCG    A  + E +  + VV WN++I G  Q
Sbjct: 467 GKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQ 526

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIY 535
           NG  LEA+  F  M    +  +  TF+  + AC     +E+G+     +   YG+     
Sbjct: 527 NGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEK 586

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
               + D+ A+ G L  A+ V  +M  + +   W A++     HG +       +Q L
Sbjct: 587 HYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCL 644



 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 169/547 (30%), Positives = 285/547 (52%), Gaps = 20/547 (3%)

Query: 162 VSWSSIIASYFDN----ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           V  SS+I +  D     ADV   L+  H   ++G + D    + L ++C +   L   + 
Sbjct: 12  VDKSSMIPTSTDGWYAPADV---LQYLH---QKGSQVDSYDYVKLLQSCVKAKDLAVGKQ 65

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H H+LR  +K +  + N+ + +Y  CG +  A R F K   +   SW  MIS Y   G 
Sbjct: 66  VHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGL 125

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            Q+A   F  M +   EP+  T +++L +C+    L  G+ VH +++  G+      +G 
Sbjct: 126 GQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNAT-VGN 184

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           ALI  YA+CG + +  +V  A+  R+ +SW  L   YA  G ++E+L+    M   G+ P
Sbjct: 185 ALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRP 244

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
              +  + LSACG++ +L+ G QIH  +++ +   D  V ++L  MY KCG    A  +F
Sbjct: 245 SRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVF 304

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E +  + V+ WN+MI G   +G   EA  +FH+M   C+  D VT+L  + AC+  G L 
Sbjct: 305 ECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLA 364

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK +H + +  G+  D+    AL +MY+K G ++ A++VFD M +R+VVSW+A++  Y 
Sbjct: 365 CGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYA 424

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
             GQ+ ++ S FK+ML  G++ N++T+M +L ACS+  +++ GK     +   G+  DL 
Sbjct: 425 DCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLA 484

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR-------IDVMKTI 689
               ++ +  + G +E A ++   M    +   W  L+ G   + R        +VMK+ 
Sbjct: 485 VANALMSMYFKCGSVEDAIRVSEGMS-TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSE 543

Query: 690 EKELSVT 696
           E   + T
Sbjct: 544 EMRPNAT 550



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 249/488 (51%), Gaps = 12/488 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++  GL  +      LI  YA+ GS+R +R VFD     D   W  L   Y  + +
Sbjct: 167 VHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGY 226

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +ES+  YH M++E    S   Y +VL AC SL  L  G+++H +I++     D  + T+
Sbjct: 227 AQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTA 286

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y + G + DAR+VF+ + +RDV++W+++I    D+  + E   MFH M++E V PD
Sbjct: 287 LTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPD 346

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT L++  AC     L   + IH   ++  +  D   GN+ I MYSK G +  A + F 
Sbjct: 347 RVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFD 406

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++ KR   SWTA++  Y   G   ++  +F KML+   E N IT + VL +C+    L+ 
Sbjct: 407 RMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKW 466

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +H ++++ G+  +   +  AL+  Y +CG + +  +V   +  R++++WN LI   A
Sbjct: 467 GKEIHAEVVKAGIFADL-AVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLA 525

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK----IDCK 431
           + G   EAL+    M++  + P++ +  + +SAC     ++ G +    + K    +  +
Sbjct: 526 QNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTE 585

Query: 432 DEFVQSSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
             +  + ++D+ ++ G    A  ++     + S  MW +++     +GN    + +  Q 
Sbjct: 586 KHY--ACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGN----VEIGEQA 639

Query: 491 YLNCLEMD 498
              CL+++
Sbjct: 640 AEQCLKLE 647


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 251/759 (33%), Positives = 410/759 (54%), Gaps = 29/759 (3%)

Query: 1   MPL-FRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           MPL  ++C  L  +    R+H+ +    L  D    T L++ Y + G +  +  VF    
Sbjct: 63  MPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMP 122

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E D   W  LI  Y+    ++E++LL+ +M +   T ++    ++L AC  + +L  G++
Sbjct: 123 ERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQE 182

Query: 117 VHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +HG  ++ G FD D  + T+++  Y  F  +   R VF  M  R++VSW++II  + +  
Sbjct: 183 IHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVG 241

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D ++ LK++ SM+ EG++ D VTML + +AC E   LR    +H   ++  +  D  + N
Sbjct: 242 DCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILN 301

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MYS  G L S+   F  +       W +MIS Y   G+  +A+  F+KM   + + 
Sbjct: 302 ALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKE 361

Query: 296 NLITLITVLGSCAGLG----WLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMS 350
           ++ T+  +L  C  L     W   G+ +H   ++ G+  E D YLG AL+  Y +  +++
Sbjct: 362 DVRTIAIMLSLCNDLNDGSIW---GRGLHAHAMKSGI--ELDAYLGNALLSMYVKHNQIT 416

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
             + V   +   +++SWN +IS +A+     +A EL + M    +  +S+++ S L+ C 
Sbjct: 417 AAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCK 476

Query: 411 NVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           +   L  G  IHG  IK   + +  + +SL +MY  CG +  A  +F R  Q+ +V WNS
Sbjct: 477 DGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNS 536

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I  + +N N+ +A+ LF+ M ++ LE + VT +  + +C+ +  L  G+ +H    +Y 
Sbjct: 537 LISSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLH----AYT 591

Query: 530 VRKDIYID------TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
            R+++ ++       A   MYA+CG LQ A+++F ++  R++VSW+AMI  YGMHG+  D
Sbjct: 592 TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRD 651

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMV 642
           A   F QMLD G KPN V+F ++L ACSHSG    G   F++M R FG+ P L HY CMV
Sbjct: 652 ATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMV 711

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           DLL R G    A   I+SMP   + SIW ALL+ C+I     +++TI  +L     ++ G
Sbjct: 712 DLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPG 771

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + LLSNIYA  G W E  ++R  +   GL K PG S I
Sbjct: 772 NFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWI 810



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 237/501 (47%), Gaps = 3/501 (0%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+SII  +    +    L  +  M   G+ PD  TM  + +ACG L ++     IH  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
              +  D  +G + +  Y KCG +  A + FV++ +R   SW A+IS Y     +++A+ 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
            FV+M +    PN  T++ +L +C  +  LR G+ +H   +R G+     Y+G AL+ FY
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
                +    +V   +  RNI+SWN +I+ +   G   +AL+L   M   G+  D+ ++ 
Sbjct: 208 MRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
             + AC   G L+LG+Q+H   IK +   D F+ ++L++MYS  G    ++ LF  +   
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTS 326

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWV 521
              +WNSMI  +   G   EAI LF +M L  ++ D  T    +  C+++      G+ +
Sbjct: 327 DAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGL 386

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H   +  G+  D Y+  AL  MY K   +  AQ VF+ M   +V+SW+ MI  +      
Sbjct: 387 HAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFR 446

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACM 641
             A  LF  M +S IK N  T +++L  C     +  G+         G+E +      +
Sbjct: 447 AKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSL 506

Query: 642 VDLLSRSGDIEGAFKMIHSMP 662
            ++    GD   A  M    P
Sbjct: 507 TEMYINCGDERAATNMFTRCP 527


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/650 (35%), Positives = 371/650 (57%), Gaps = 12/650 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S LR C+S   L  G+ +H RI  CGF  + V+  S++  Y  F C D A       T+ 
Sbjct: 8   SALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFY--FSCHDYASAELVFQTND 65

Query: 160 ---DVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPA 215
              DV  W++++++Y +N    E L++F  +     V PDF T   + +ACG L  +   
Sbjct: 66  CPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYG 125

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R IH H+L+  +  D  +G+S + MY+KC   + A + F +  +R    W A+ISCY + 
Sbjct: 126 RRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKD 185

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  + AL++F KM E+  EPN +T   V+ SC  L  L  GK VH ++I + +  +  ++
Sbjct: 186 GKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD-AFV 244

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++ Y +CG +   ++V   I  +N ++WN +I+ Y+ KG S+  +ELL++M   G 
Sbjct: 245 LSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGT 304

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAY 453
            P   ++ S + A      L+ G  IHG++++  ID  D F+  SLID Y KCG+ + A 
Sbjct: 305 KPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDV-DIFIDVSLIDFYFKCGYVSSAE 363

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F  I +  VV WN MI G    GN ++A++++  M  + ++ D +TF + + ACS + 
Sbjct: 364 TIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLA 423

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L+KG+ +H+ +I++ +  +  +  AL DMYAKCGD+  A+++F  + +R++VSW++MI 
Sbjct: 424 ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIF 483

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            YG HGQ ++A  LF +M    ++ + VTF+ +L ACSH+G V+EG  YFN M + + ++
Sbjct: 484 AYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIK 543

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIH-SMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           P ++HY+C++DLL R+G +  A++++  S    ++  +   L + C +H    +   I K
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGK 603

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            L     +D   Y LLSN+YA    WDE  KVR  M+  GLKK PG S I
Sbjct: 604 MLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWI 653



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 167/566 (29%), Positives = 295/566 (52%), Gaps = 8/566 (1%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP-D 59
            R+CT+ + L +   +H  +   G   +   S  LI  Y       S+ LVF T   P D
Sbjct: 10  LRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLD 69

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVH 118
             +W  L+  Y  N  F E++ L+ ++        +F  YP VL+AC  LG +  G ++H
Sbjct: 70  VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIH 129

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             ++K G   D  + +S++  Y +     DA K+FD+   RDV  W+++I+ YF +    
Sbjct: 130 NHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAE 189

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             LK F  M   G EP+ VT   +  +C  L +L   + +H  ++ R+I +D  + ++ +
Sbjct: 190 MALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALV 249

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG L  A+  F KI ++   +W AMI+ Y+  G  +  +E  ++M +   +P L+
Sbjct: 250 DMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLM 309

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL +++ + +    LR GK +H  I+R  +  +  ++  +LI+FY +CG +S  E +   
Sbjct: 310 TLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDI-FIDVSLIDFYFKCGYVSSAETIFRT 368

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I +  ++SWN++IS +   G   +AL +   M+   + PD+ + +S+LSAC  + +L  G
Sbjct: 369 ISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKG 428

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            ++H  +I    + +E V  +L+DMY+KCG  + A  LF ++ ++ +V W SMI  +  +
Sbjct: 429 RELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSH 488

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYI 536
           G + EA+ LF +M    +  D VTFL  + ACS+ G +++G  + +  ++ Y ++  I  
Sbjct: 489 GQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEH 548

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSE 562
            + L D+  + G L  A  +     E
Sbjct: 549 YSCLIDLLGRAGRLHEAYEILQRSKE 574



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 248/471 (52%), Gaps = 4/471 (0%)

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D+VT+LS    C     L+  + IH  +     + +  L  S I  Y  C D  SAE  F
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61

Query: 255 VKIEKRCTTS-WTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGW 312
              +     S W A++S Y  +  F +AL+ F ++       P+  T   VL +C GLG 
Sbjct: 62  QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  G+ +H  +++ G+  +  ++G +L+  YA+C +  +  K+     +R++  WN +IS
Sbjct: 122 VIYGRRIHNHLLKTGLIWDV-FVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            Y + G ++ AL+   +M+  G  P+S +    +S+C  + +L+ G ++H  +I+     
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D FV S+L+DMY KCG   +A  +FE+I +K+ + WN+MI G+   G+S   I L  +M 
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
               +   +T  + I A S   QL  GK++H  ++   +  DI+ID +L D Y KCG + 
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           +A+ +F ++S+  VVSW+ MI  + M G    A  ++  M +  +KP+ +TF + L ACS
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
              ++++G+     +    +E +      ++D+ ++ GD++ A K+ H +P
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLP 471



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 271/537 (50%), Gaps = 9/537 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L ++    R+H HLL TGL +D    + L+  YA+      +  +FD F + D
Sbjct: 112 VLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRD 171

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I CY  +   E ++  + KM       ++  +  V+ +C+ L +L  G++VH 
Sbjct: 172 VGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHR 231

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+     D  + ++++  YG+ GCL+ A++VF+K+  ++ ++W+++I  Y    D   
Sbjct: 232 ELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRS 291

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +++   M  EG +P  +T+ S+  A      LR  + IHG++LR +I +D  +  S I 
Sbjct: 292 CIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLID 351

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            Y KCG + SAE  F  I K    SW  MIS +   G   +AL  +  M E   +P+ +T
Sbjct: 352 FYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALT 411

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + L +C+ L  L +G+ +H  II   +      +G AL++ YA+CG + E  K+ H +
Sbjct: 412 FSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMG-ALLDMYAKCGDVDEARKLFHQL 470

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG- 418
            +R+++SW  +I  Y   G + EAL L  +MQ   +  DS +  + LSAC + G +  G 
Sbjct: 471 PKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGY 530

Query: 419 LQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICGFY 475
           +  +  V++ D K      S LID+  + G  + AY + +R ++    + + +++     
Sbjct: 531 MYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACL 590

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            + N +  I +  +M +     D  T++      +++ + ++ + V  K+   G++K
Sbjct: 591 LHNNFVLGIQI-GKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKK 646



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 3/181 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD VT L+A++ C++   L++GK +H ++ S G + +I +  +L   Y  C D  +A+ V
Sbjct: 1   MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60

Query: 557 FDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSHSG 614
           F +     +V  W+A++  Y  + +  +A  LF Q+  +S ++P+  T+  +L AC   G
Sbjct: 61  FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            V  G+   N +   G+  D+   + ++++ ++      A K+    P    G  W A++
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGC-WNAVI 179

Query: 675 N 675
           +
Sbjct: 180 S 180


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/728 (31%), Positives = 376/728 (51%), Gaps = 4/728 (0%)

Query: 17  HAH-LLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           HAH +  T  H D  +   ++ +Y   G   ++  +F T  +PD   W  LI  Y  +  
Sbjct: 72  HAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGM 131

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F  S+ L  +M R    +       +L++C  L DL  G ++H   +K G + D    ++
Sbjct: 132 FRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSA 191

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  YG+   LDDA + F  M  R+ VSW + IA    N   + G+++F  M R G+   
Sbjct: 192 LVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVS 251

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
                S   +C  +  L  AR +H H ++     D  +G + + +Y+K G+L+ A R F+
Sbjct: 252 QPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFI 311

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +      +  AM+    R+G   +A++ F  M       ++I+L  V  +CA +    +
Sbjct: 312 GLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQ 371

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  VHC  ++ G   +   +  A+++ Y +C  + E   V   + +R+ +SWN +I+   
Sbjct: 372 GLQVHCLAVKSGFDVDV-CVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALE 430

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           +    ++ +  L +M   G+ PD F+  S L AC  + SL+ GL +HG  IK     D F
Sbjct: 431 QNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF 490

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V S+++DMY KCG    A  L +RI  + +V WNS+I GF     S EA   F +M    
Sbjct: 491 VSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMG 550

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ D  T+ T +  C+N+  +E GK +H ++I   +  D YI + L DMYAKCG++  + 
Sbjct: 551 VKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSL 610

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F+   + + VSW+AMI  Y +HGQ  +A  +F++M  + + PN  TF+ +L ACSH G
Sbjct: 611 LMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVG 670

Query: 615 SVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            +++G  YF+ M   + + P L+H+ACMVD+L RS   + A + I SMP  A+  +W  L
Sbjct: 671 LLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTL 730

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ C+I + ++V +T    +     +D   Y LLSN+YA  G W +  + R +M    L+
Sbjct: 731 LSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLR 790

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 791 KEPGCSWI 798



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 167/576 (28%), Positives = 299/576 (51%), Gaps = 7/576 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L +SC  L  L    ++HA  + TGL  D  A + L++ Y +  SL  +   F    E +
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERN 216

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W   I   + N  +   + L+ +M R    +S   Y S  R+C+++  L +  ++H 
Sbjct: 217 SVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHA 276

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK  F  D V+ T+I+  Y + G L DAR+ F  +   +V + ++++         +E
Sbjct: 277 HAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAE 336

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +++F  M R GV  D +++  +  AC E+        +H   ++    +D  + N+ + 
Sbjct: 337 AMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILD 396

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC  L+ A   F ++E+R + SW A+I+   ++  ++  +    +ML    EP+  T
Sbjct: 397 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CAGL  L  G  VH + I+ G+G +  ++   +++ Y +CG ++E +K+   I
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDA-FVSSTVVDMYCKCGAITEAQKLHDRI 515

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G + ++SWN +IS ++    S+EA     +M   G+ PD F+ A+ L  C N+ +++LG 
Sbjct: 516 GGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGK 575

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG +IK +   DE++ S+L+DMY+KCG    + L+FE+ ++   V WN+MICG+  +G
Sbjct: 576 QIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHG 635

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYID 537
             LEA+ +F +M    +  +  TF+  ++ACS++G L+ G    H + S Y +   +   
Sbjct: 636 QGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHF 695

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
             + D+  +    Q A     SM  E + V W  ++
Sbjct: 696 ACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLL 731



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/637 (25%), Positives = 301/637 (47%), Gaps = 43/637 (6%)

Query: 93  ISNFIYPSVLRACSSLGD--LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
           ++   +  + + C+S G   L +G+  H R++  GF     +   +L  Y   G    A 
Sbjct: 15  VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS------------------------ 186
            VFD M  RD VSW++++ +Y    D      +F +                        
Sbjct: 75  GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134

Query: 187 -------MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
                  M R GV  D  T+  L ++CG L  L     IH   ++  ++ D   G++ + 
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVD 194

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KC  L  A R F  + +R + SW A I+   ++  + + +E FV+M  +    +   
Sbjct: 195 MYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPA 254

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +   SCA +  L   + +H   I+     +   +G A+++ YA+ G + +  +    +
Sbjct: 255 YASAFRSCAAMPCLSTARQLHAHAIKNVFSSDR-VVGTAIVDVYAKAGNLVDARRAFIGL 313

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              N+ + N ++    R G+  EA++L   M   G+  D  S++   SAC  V     GL
Sbjct: 314 PHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGL 373

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H   +K     D  V+++++D+Y KC     AYL+F+ ++Q+  V WN++I    QN 
Sbjct: 374 QVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNE 433

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              + I   ++M  + +E D+ T+ + ++AC+ +  LE G  VH K I  G+  D ++ +
Sbjct: 434 CYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS 493

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
            + DMY KCG +  AQ++ D +  + +VSW+++I  + +  Q  +A   F +MLD G+KP
Sbjct: 494 TVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKP 553

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---F 655
           +  T+  +L  C++  ++E GK     +    +  D    + +VD+ ++ G++  +   F
Sbjct: 554 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMF 613

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEK 691
           +    + F +    W A++ G  +H + ++ ++  E+
Sbjct: 614 EKARKLDFVS----WNAMICGYALHGQGLEALEMFER 646



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 189/375 (50%), Gaps = 6/375 (1%)

Query: 3   LFRSCTNLR---KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F +C  ++   +  ++H   + +G   D      +++ Y +  +L  + LVF   ++ D
Sbjct: 359 VFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRD 418

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I     N  +E++I   ++M+R      +F Y SVL+AC+ L  L  G  VHG
Sbjct: 419 SVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHG 478

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + IK G   D  + ++++  Y + G + +A+K+ D++  +++VSW+SII+ +       E
Sbjct: 479 KAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEE 538

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             + F  M+  GV+PD  T  ++ + C  L ++   + IHG ++++++  D  + ++ + 
Sbjct: 539 AQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVD 598

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG++  +   F K  K    SW AMI  Y   G   +ALE F +M      PN  T
Sbjct: 599 MYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHAT 658

Query: 300 LITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + VL +C+ +G L +G +  H    R  + P+ ++    +++         E  + I +
Sbjct: 659 FVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFA-CMVDILGRSKGPQEALEFIRS 717

Query: 359 IG-ERNILSWNMLIS 372
           +  E + + W  L+S
Sbjct: 718 MPIEADAVVWKTLLS 732


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/738 (32%), Positives = 392/738 (53%), Gaps = 14/738 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  L   GL      +  LI  Y+  G +  +  VFD+    D+  W   I  Y  N +
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF--------- 126
            + ++ L+ KM  E   IS+    SVL AC+ LG    G+ VHG  +K G          
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFH 185
             D+ + + ++  Y + G +  AR+VFD M S+ +V  W+ I+  Y   A+  E L +F 
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G+ PD   +  L +    L   R     HG++++        + N+ I  Y+K  
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSN 459

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            + +A   F ++  + T SW ++IS    +G   +A+E FV+M     E +  TL++VL 
Sbjct: 460 MIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLP 519

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +CA   +   G+ VH   ++ G+  E   L  AL++ Y+ C       ++   + ++N++
Sbjct: 520 ACARSHYWFVGRVVHGYSVKTGLIGETS-LANALLDMYSNCSDWHSTNQIFRNMAQKNVV 578

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SW  +I+ Y R G+  +   LL +M   G+ PD F+V S L       SL+ G  +HG+ 
Sbjct: 579 SWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYA 638

Query: 426 IKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           I+   +    V ++L++MY  C     A L+F+ +  K ++ WN++I G+ +N  + E+ 
Sbjct: 639 IRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESF 698

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
           +LF  M L   + + VT    + A ++I  LE+G+ +H   +  G  +D Y   AL DMY
Sbjct: 699 SLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMY 757

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KCG L  A+ +FD ++++N++SW+ MI  YGMHG   DA +LF+QM  SG++P+  +F 
Sbjct: 758 VKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFS 817

Query: 605 NILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            IL+AC HSG   EG  +FNAMR  + +EP L+HY C+VDLLS +G+++ AF+ I SMP 
Sbjct: 818 AILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPI 877

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
             + SIW +LL+GCRIH+ + + + +   +      + GYY LL+NIYAE   W+   K+
Sbjct: 878 EPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKL 937

Query: 724 RSIMEVTGLKKVPGYSTI 741
           ++ +   GL++  G S I
Sbjct: 938 KNKIGGRGLRENTGCSWI 955



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 306/619 (49%), Gaps = 18/619 (2%)

Query: 18  AHLLV---TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KEPDSFMWAVLIKCYMW 72
           AH LV   TG         RL+ +Y + G L  +R+VFD    +  D  +W  L+  Y  
Sbjct: 116 AHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAK 175

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
              F+E + L+ +M     +        VL+  +SLG +  GE +HG + K G  +   +
Sbjct: 176 AGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAV 235

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y   GC++DA +VFD M +RD +SW+S I+ YF N      + +F  M  EG 
Sbjct: 236 ANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGT 295

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI---------KIDGPLGNSFIVMYSK 243
           E   VT+LS+  AC EL      + +HG+ ++  +          ID  LG+  + MY K
Sbjct: 296 EISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVK 355

Query: 244 CGDLLSAERTFVKIEKRCTTS-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           CGD+ SA R F  +  +     W  ++  Y ++  F+++L  F +M E+   P+   L  
Sbjct: 356 CGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSC 415

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L     L   R+G   H  +++ G G +      ALI FYA+   +     V   +  +
Sbjct: 416 LLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCN-ALISFYAKSNMIDNAVLVFDRMPHQ 474

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + +SWN +IS     G++ EA+EL V+M   G   DS ++ S L AC       +G  +H
Sbjct: 475 DTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVH 534

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G+ +K     E  + ++L+DMYS C   +    +F  + QK+VV W +MI  + + G   
Sbjct: 535 GYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFD 594

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           +   L  +M L+ ++ D     + +   +    L++GK VH   I  G+ K + +  AL 
Sbjct: 595 KVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALM 654

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           +MY  C +++ A+ VFD ++ ++++SW+ +I  Y  +   N++ SLF  ML    KPN V
Sbjct: 655 EMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTV 713

Query: 602 TFMNILWACSHSGSVEEGK 620
           T   IL A +   S+E G+
Sbjct: 714 TMTCILPAVASISSLERGR 732



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/537 (29%), Positives = 276/537 (51%), Gaps = 15/537 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDK--DDVIQTSILCTYGEFGCLDDARKVFDK 155
           Y +V++ C     L +  + H  +++ G       V+   ++  Y + G L  AR VFD+
Sbjct: 97  YCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155

Query: 156 MTSR--DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           M  R  DV  W+S++++Y    D  EG+ +F  M   GV PD   +  + +    L S+ 
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
               IHG + +  +     + N+ I +YS+CG +  A + F  +  R   SW + IS Y 
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
            +GW  +A++ F KM     E + +T+++VL +CA LG+   GK VH   ++ G+  + +
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335

Query: 334 --------YLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLISEYARKGMSKEAL 384
                    LG  L+  Y +CG M    +V  A+  + N+  WN+++  YA+    +E+L
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMY 443
            L  QM   G+ PD  +++  L     +   + GL  HG+++K+    +  V ++LI  Y
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFY 455

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           +K    + A L+F+R+  +  + WNS+I G   NG + EAI LF +M++   E+D  T L
Sbjct: 456 AKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLL 515

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           + + AC+       G+ VH   +  G+  +  +  AL DMY+ C D  +  ++F +M+++
Sbjct: 516 SVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQK 575

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           NVVSW+AMI  Y   G  +  A L ++M+  GIKP+     ++L   +   S+++GK
Sbjct: 576 NVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGK 632



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 122/249 (48%), Gaps = 11/249 (4%)

Query: 439 LIDMYSKCGFKNLAYLLFERIQQK--SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           L+  Y KCG    A ++F+ +  +   V +W S++  + + G+  E ++LF QM    + 
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D       ++  +++G + +G+ +H  L   G+ +   +  AL  +Y++CG ++ A +V
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           FDSM  R+ +SW++ I  Y  +G  + A  LF +M   G + + VT +++L AC+  G  
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFE 315

Query: 617 EEGKFYFNAMRIFGVEPDLQHYACMVD---------LLSRSGDIEGAFKMIHSMPFPANG 667
             GK         G+  DL+     +D         +  + GD+  A ++  +MP   N 
Sbjct: 316 LVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNV 375

Query: 668 SIWGALLNG 676
            +W  ++ G
Sbjct: 376 HVWNLIMGG 384



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 36/361 (9%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    +L++   +H + +  G+    P +  L+E Y    ++  +RLVFD     D   W
Sbjct: 622 FAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISW 681

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             LI  Y  NNF  ES  L+  M+  Q   +      +L A +S+  L  G ++H   ++
Sbjct: 682 NTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVTMTCILPAVASISSLERGREIHAYALR 740

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            GF +D     +++  Y + G L  AR +FD++T ++++SW+ +IA Y  +    + + +
Sbjct: 741 RGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVAL 800

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M   GVEPD  +  ++  AC            H  +     K               
Sbjct: 801 FEQMRGSGVEPDTASFSAILYAC-----------CHSGLTAEGWK--------------- 834

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
                +A R   KIE +    +T ++   + +G  ++A E F++ + +  EP+    +++
Sbjct: 835 ---FFNAMRKEYKIEPK-LKHYTCIVDLLSHTGNLKEAFE-FIESMPI--EPDSSIWVSL 887

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L  C     ++  + V  ++ +  + PE       L   YAE  +    +K+ + IG R 
Sbjct: 888 LHGCRIHRDVKLAEKVADRVFK--LEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRG 945

Query: 364 I 364
           +
Sbjct: 946 L 946



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 54/116 (46%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S ++L +   +HA+ L  G   D   S  L++ Y + G+L  +R++FD   + + 
Sbjct: 719 LPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNL 778

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             W ++I  Y  +   ++++ L+ +M           + ++L AC   G    G K
Sbjct: 779 ISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWK 834


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 251/759 (33%), Positives = 410/759 (54%), Gaps = 29/759 (3%)

Query: 1   MPL-FRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           MPL  ++C  L  +    R+H+ +    L  D    T L++ Y + G +  +  VF    
Sbjct: 63  MPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMP 122

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E D   W  LI  Y+    ++E++LL+ +M +   T ++    ++L AC  + +L  G++
Sbjct: 123 ERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQE 182

Query: 117 VHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +HG  ++ G FD D  + T+++  Y  F  +   R VF  M  R++VSW++II  + +  
Sbjct: 183 IHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVG 241

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D ++ LK++ SM+ EG++ D VTML + +AC E   LR    +H   ++  +  D  + N
Sbjct: 242 DCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILN 301

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MYS  G L S+   F  +       W +MIS Y   G+  +A+  F+KM   + + 
Sbjct: 302 ALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKE 361

Query: 296 NLITLITVLGSCAGLG----WLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMS 350
           ++ T+  +L  C  L     W   G+ +H   ++ G+  E D YLG AL+  Y +  +++
Sbjct: 362 DVRTIAIMLSLCNDLNDGSIW---GRGLHAHAMKSGI--ELDAYLGNALLSMYVKHNQIT 416

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
             + V   +   +++SWN +IS +A+     +A EL + M    +  +S+++ S L+ C 
Sbjct: 417 AAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCK 476

Query: 411 NVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           +   L  G  IHG  IK   + +  + +SL +MY  CG +  A  +F R  Q+ +V WNS
Sbjct: 477 DGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNS 536

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I  + +N N+ +A+ LF+ M ++ LE + VT +  + +C+ +  L  G+ +H    +Y 
Sbjct: 537 LISSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLH----AYT 591

Query: 530 VRKDIYID------TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
            R+++ ++       A   MYA+CG LQ A+++F ++  R++VSW+AMI  YGMHG+  D
Sbjct: 592 TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRD 651

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMV 642
           A   F QMLD G KPN V+F ++L ACSHSG    G   F++M R FG+ P L HY CMV
Sbjct: 652 ATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMV 711

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           DLL R G    A   I+SMP   + SIW ALL+ C+I     +++TI  +L     ++ G
Sbjct: 712 DLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPG 771

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + LLSNIYA  G W E  ++R  +   GL K PG S I
Sbjct: 772 NFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWI 810



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 237/501 (47%), Gaps = 3/501 (0%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+SII  +    +    L  +  M   G+ PD  TM  + +ACG L ++     IH  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
              +  D  +G + +  Y KCG +  A + FV++ +R   SW A+IS Y     +++A+ 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
            FV+M +    PN  T++ +L +C  +  LR G+ +H   +R G+     Y+G AL+ FY
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
                +    +V   +  RNI+SWN +I+ +   G   +AL+L   M   G+  D+ ++ 
Sbjct: 208 MRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
             + AC   G L+LG+Q+H   IK +   D F+ ++L++MYS  G    ++ LF  +   
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTS 326

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWV 521
              +WNSMI  +   G   EAI LF +M L  ++ D  T    +  C+++      G+ +
Sbjct: 327 DAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGL 386

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H   +  G+  D Y+  AL  MY K   +  AQ VF+ M   +V+SW+ MI  +      
Sbjct: 387 HAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFR 446

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACM 641
             A  LF  M +S IK N  T +++L  C     +  G+         G+E +      +
Sbjct: 447 AKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSL 506

Query: 642 VDLLSRSGDIEGAFKMIHSMP 662
            ++    GD   A  M    P
Sbjct: 507 TEMYINCGDERAATNMFTRCP 527


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/643 (33%), Positives = 360/643 (55%), Gaps = 6/643 (0%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L  CSSL +L    ++   + K G  ++   QT ++  +  +G +D+A +VF+ + S+ 
Sbjct: 43  LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            V + +++  +   +D+ + L+ F  M  + VEP       L + CG+   LR  + IHG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            +++    +D         MY+KC  +  A + F ++ +R   SW  +++ Y+++G  + 
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           ALE    M E   +P+ IT+++VL + + L  +  GK +H   +R G     + +  AL+
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN-ISTALV 278

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
           + YA+CG +    ++   + ERN++SWN +I  Y +    KEA+ +  +M   G+ P   
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERI 459
           SV  +L AC ++G L+ G  IH   +++   ++  V +SLI MY KC   + A  +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           Q +++V WN+MI GF QNG  ++A+N F QM    ++ D  T+++ I A + +      K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
           W+H  ++   + K++++ TAL DMYAKCG +  A+ +FD MSER+V +W+AMID YG HG
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHY 638
               A  LF++M    IKPN VTF++++ ACSHSG VE G K ++     + +E  + HY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
             MVDLL R+G +  A+  I  MP     +++GA+L  C+IHK ++  +   + L     
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 638

Query: 699 NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +D GY+ LL+NIY     W++ G+VR  M   GL+K PG S +
Sbjct: 639 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 177/653 (27%), Positives = 325/653 (49%), Gaps = 43/653 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   C++L++L ++   +   GL+ +    T+L+  +   GS+  +  VF+      + +
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           +  ++K +   +  ++++  + +M  +  +  + NF Y  +L+ C    +L  G+++HG 
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDEAELRVGKEIHGL 160

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K GF  D    T +   Y +   +++ARKVFD+M  RD+VSW++I+A Y  N      
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L+M  SM  E ++P F+T++S+  A   L  +   + IHG+ +R        +  + + M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L +A + F  + +R   SW +MI  Y ++   ++A+  F KML+   +P  +++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  L +CA LG L  G+ +H   +  G+      +  +LI  Y +C ++     +   + 
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN-SLISMYCKCKEVDTAASMFGKLQ 399

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R ++SWN +I  +A+ G   +AL    QM++  + PD+F+  S ++A   +        
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IHG V++  C D+  FV ++L+DMY+KCG   +A L+F+ + ++ V  WN+MI G+  +G
Sbjct: 460 IHGVVMR-SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
               A+ LF +M    ++ + VTFL+ I ACS+ G +E G      L  + + K+ Y   
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG------LKCFYMMKENYSIE 572

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
              D Y                         AM+D  G  G+LN+A     QM    +KP
Sbjct: 573 LSMDHYG------------------------AMVDLLGRAGRLNEAWDFIMQM---PVKP 605

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
               +  +L AC    +V   +    A R+F + PD   Y  ++  + R+  +
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAE--KAAERLFELNPDDGGYHVLLANIYRAASM 656


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/739 (31%), Positives = 396/739 (53%), Gaps = 8/739 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L  L + +A ++  GL  +   +++LI SYA  G    S  VF      D F+W  +IK
Sbjct: 39  SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFD 127
            +  N  +  S+  +  M+    +  +F  P V+ AC+ L     G  VHG ++K  GFD
Sbjct: 99  AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF--- 184
           ++  +  S +  Y + G L DA  VFD+M  RDVV+W++II+ +  N +   GL      
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           HS   +  +P+  T+    +AC  L +L+  R +HG  ++  +     + +S    YSK 
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G+   A  +F ++      SWT++I+   RSG  +++ + F +M      P+ + +  ++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-N 363
                +  + +GK+ H  +IR     +   +  +L+  Y +   +S  EK+   I E  N
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLD-STVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
             +WN ++  Y +     + +EL  ++Q  G+  DS S  S +S+C ++G++ LG  +H 
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHC 457

Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +V+K        V +SLID+Y K G   +A+ +F      +V+ WN+MI  +     S +
Sbjct: 458 YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEK 516

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           AI LF +M     +   +T +T + AC N G LE+G+ +H  +       ++ +  AL D
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MYAKCG L+ ++ +FD+ ++++ V W+ MI  YGMHG +  A +LF QM +S +KP   T
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           F+ +L AC+H+G VE+GK  F  M  + V+P+L+HY+C+VDLLSRSG++E A   + SMP
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
           F  +G IWG LL+ C  H   ++   + +    +   ++GYY +L+N+Y+  G W+E  +
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAER 756

Query: 723 VRSIMEVTGLKKVPGYSTI 741
            R +M  +G+ K  G+S +
Sbjct: 757 AREMMRESGVGKRAGHSVV 775



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 166/587 (28%), Positives = 299/587 (50%), Gaps = 11/587 (1%)

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           C     L S  K +  II  G  ++  + + ++ +Y  +G  + + +VF  +T RD+  W
Sbjct: 34  CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
           +SII ++F N D +  L  F SM+  G  PD  T   +  AC EL        +HG VL+
Sbjct: 94  NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153

Query: 225 R-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
                 +  +G SF+  YSKCG L  A   F ++  R   +WTA+IS + ++G  +  L 
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213

Query: 284 SFVKMLEVK---EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
              KM       ++PN  TL     +C+ LG L+EG+ +H   ++ G+     ++  ++ 
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS-KFVQSSMF 272

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
            FY++ G  SE       +G+ ++ SW  +I+  AR G  +E+ ++  +MQ  G+ PD  
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFER 458
            ++  ++  G +  +  G   HG VI+  C   D  V +SL+ MY K    ++A  LF R
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGFVIR-HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR 391

Query: 459 IQQK-SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           I ++ +   WN+M+ G+ +    ++ I LF ++    +E+D  +  + I +CS+IG +  
Sbjct: 392 ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLL 451

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  ++   +   I +  +L D+Y K GDL  A R+F   ++ NV++W+AMI  Y  
Sbjct: 452 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVH 510

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
             Q   A +LF +M+    KP+ +T + +L AC ++GS+E G+     +     E +L  
Sbjct: 511 CEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSL 570

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
            A ++D+ ++ G +E + ++  +     +   W  +++G  +H  ++
Sbjct: 571 SAALIDMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVE 616


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 243/731 (33%), Positives = 383/731 (52%), Gaps = 11/731 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
             +HAHLL +GL +       L+  Y++     S+R VFD   +P    W+ L+  Y  N
Sbjct: 24  AHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNN 81

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
               E++  +  M       + F  P VL+ C+   D G G +VH   +  G   D  + 
Sbjct: 82  ALPREALAAFRAMRARGVRCNEFALPIVLK-CAP--DAGLGVQVHAVAVSTGLSGDIFVA 138

Query: 134 TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            +++  YG FG +D+AR+VFD+    R+ VSW+ +++++  N   S+ +++F  MV  GV
Sbjct: 139 NALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGV 198

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+      +  AC     L   R +H  V+R     D    N+ + MYSK GD+  A  
Sbjct: 199 RPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAAL 258

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL--GSCAGL 310
            F K+ K    SW A IS     G  Q ALE  ++M      PN+ TL ++L   + AG 
Sbjct: 259 VFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGA 318

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G    G+ +H  +I K      DY+G AL++ YA+ G + +  KV   I  +++L WN L
Sbjct: 319 GAFALGRQIHGFMI-KACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNAL 377

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
           IS  +  G   E+L L  +M+  G   +  ++A+ L +  ++ ++    Q+H    KI  
Sbjct: 378 ISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGF 437

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D  V + LID Y KC     A  +FE     +++ + SMI    Q  +  +AI LF +
Sbjct: 438 LSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFME 497

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    LE D     + + AC+++   E+GK VH  LI      D++   AL   YAKCG 
Sbjct: 498 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGS 557

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A   F  + ++ VVSWSAMI     HG    A  +F++M+D  I PN +T  ++L A
Sbjct: 558 IEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCA 617

Query: 610 CSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           C+H+G V+E K YF++M+ +FG++   +HY+CM+DLL R+G ++ A ++++SMPF AN +
Sbjct: 618 CNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAA 677

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           +WGALL   R+H+  ++ K   ++L V     +G + LL+N YA  G WDE  KVR +M+
Sbjct: 678 VWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMK 737

Query: 729 VTGLKKVPGYS 739
            + +KK P  S
Sbjct: 738 DSKVKKEPAMS 748



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 205/413 (49%), Gaps = 6/413 (1%)

Query: 6   SCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +CT  R L    ++HA ++ TG   D   +  L++ Y+++G +  + LVF    + D   
Sbjct: 211 ACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVS 270

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRA--CSSLGDLGSGEKVHGR 120
           W   I   + +   + ++ L  +M       + F   S+L+A   +  G    G ++HG 
Sbjct: 271 WNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGF 330

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +IK   D DD I  +++  Y ++G LDDARKVF+ +  +D++ W+++I+         E 
Sbjct: 331 MIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGES 390

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M +EG + +  T+ ++ ++   L ++     +H    +     D  + N  I  
Sbjct: 391 LSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDS 450

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KC  L  A + F +       ++T+MI+  ++    + A++ F++ML    EP+   L
Sbjct: 451 YWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVL 510

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            ++L +CA L    +GK VH  +I++    +  + G AL+  YA+CG + + +     + 
Sbjct: 511 SSLLNACASLSAYEQGKQVHAHLIKRKFMTDV-FAGNALVYTYAKCGSIEDADLAFSGLP 569

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           ++ ++SW+ +I   A+ G  K AL++  +M    + P+  ++ S L AC + G
Sbjct: 570 DKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 6/281 (2%)

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           S++  L+      SL LG  IH H++K      F ++ L+  YSKC     A  +F+   
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAF-RNHLLSFYSKCRLPGSARRVFDETP 64

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
               V W+S++  +  N    EA+  F  M    +  +E      ++   + G    G  
Sbjct: 65  DPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQ 121

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHG 579
           VH   +S G+  DI++  AL  MY   G +  A+RVFD  + +RN VSW+ M+  +  + 
Sbjct: 122 VHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKND 181

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA 639
           + +DA  LF +M+ SG++PNE  F  ++ AC+ S  +E G+     +   G + D+    
Sbjct: 182 RCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTAN 241

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            +VD+ S+ GDI  A  +   +P   +   W A ++GC +H
Sbjct: 242 ALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLH 281


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/646 (34%), Positives = 362/646 (56%), Gaps = 6/646 (0%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +LRAC +   L  G+ +H +++  G   D  +  +++  Y      D A+ VFD M +  
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68

Query: 161 VVS-WSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSI 218
            +S W+ ++A Y  N    E L++F  ++    ++PD  T  S+ +ACG L      + I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  +++  + +D  +G+S + MY+KC     A   F ++ ++    W  +ISCY +SG F
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++ALE F  M     EPN +T+ T + SCA L  L  G  +H ++I  G   +  ++  A
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD-SFISSA 247

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L++ Y +CG +    +V   + ++ +++WN +IS Y  KG S   ++L  +M   G+ P 
Sbjct: 248 LVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPT 307

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
             +++S +  C     L  G  +HG+ I+   + D F+ SSL+D+Y KCG   LA  +F+
Sbjct: 308 LTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFK 367

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            I +  VV WN MI G+   G   EA+ LF +M  + +E D +TF + + ACS +  LEK
Sbjct: 368 LIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEK 427

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H+ +I   +  +  +  AL DMYAKCG +  A  VF  + +R++VSW++MI  YG 
Sbjct: 428 GEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGS 487

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HGQ   A  LF +ML S +KP+ VTF+ IL AC H+G V+EG +YFN M  ++G+ P ++
Sbjct: 488 HGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVE 547

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMP-FPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           HY+C++DLL R+G +  A++++   P    +  +   L + CR+H+ ID+   I + L  
Sbjct: 548 HYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLID 607

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +D+  Y LLSN+YA    WDE   VRS M+  GLKK PG S I
Sbjct: 608 KDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWI 653



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 169/603 (28%), Positives = 311/603 (51%), Gaps = 12/603 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL R+C N + L +   +H  ++  GL  D      LI  Y        ++ VFD  + 
Sbjct: 7   LPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMEN 66

Query: 58  P-DSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGE 115
           P +  +W  L+  Y  N  + E++ L+ K++        ++ YPSVL+AC  L     G+
Sbjct: 67  PCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGK 126

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H  ++K G   D V+ +S++  Y +    + A  +F++M  +DV  W+++I+ Y+ + 
Sbjct: 127 MIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSG 186

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           +  E L+ F  M R G EP+ VT+ +   +C  L  L     IH  ++     +D  + +
Sbjct: 187 NFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY KCG L  A   F ++ K+   +W +MIS Y   G     ++ F +M     +P
Sbjct: 247 ALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKP 306

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
            L TL +++  C+    L EGK VH   IR  +  +  ++  +L++ Y +CGK+   E +
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDV-FINSSLMDLYFKCGKVELAENI 365

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              I +  ++SWN++IS Y  +G   EAL L  +M+   + PD+ +  S L+AC  + +L
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAAL 425

Query: 416 QLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           + G +IH  +I  K+D  +E V  +L+DMY+KCG  + A+ +F+ + ++ +V W SMI  
Sbjct: 426 EKGEEIHNLIIEKKLD-NNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITA 484

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRK 532
           +  +G +  A+ LF +M  + ++ D VTFL  + AC + G +++G +  +++++ YG+  
Sbjct: 485 YGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIP 544

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            +   + L D+  + G L  A  +     E   +V   S +     +H  ++  A + + 
Sbjct: 545 RVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIART 604

Query: 591 MLD 593
           ++D
Sbjct: 605 LID 607



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 84/168 (50%), Gaps = 2/168 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD    L  ++AC N   L++GK +H K+++ G++ DI++   L ++Y  C     A+ V
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60

Query: 557 FDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSG 614
           FD+M     +S W+ ++  Y  +    +A  LF+++L    +KP+  T+ ++L AC    
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
               GK     +   G+  D+   + +V + ++    E A  + + MP
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMP 168


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/644 (34%), Positives = 356/644 (55%), Gaps = 8/644 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L  C+++  L    + HG +   G   D  I T ++  YG FG   DAR VFD++   D
Sbjct: 62  LLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
              W  I+  Y  N +  E +K +  +++ G   D +      +AC E+  L   + IH 
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            +++     D  +    + MY+KCG++ S+ + F  I  R    WT+MI+ Y ++  +++
Sbjct: 179 QIVKVP-SFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEE 237

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            L  F +M E     N  T  T++ +C  L  L +GK  H  +I+ G+      L  +L+
Sbjct: 238 GLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELS-SCLVTSLL 296

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
           + Y +CG +S   +V +     +++ W  +I  Y   G   EAL L  +M   G+ P+  
Sbjct: 297 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCV 356

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           ++AS LS CG VG+L+LG  IHG  IK+   D  V ++L+ MY+KC     A  +FE   
Sbjct: 357 TIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMES 416

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           +K +V WNS+I GF QNG+  EA+ LFH+M    +  + VT  +   AC+++G L  G  
Sbjct: 417 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSS 476

Query: 521 VHHKLISYG--VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           +H   +  G      +++ TAL D YAKCGD ++A+ +FD++ E+N ++WSAMI  YG  
Sbjct: 477 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQ 536

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQH 637
           G    +  LF++ML    KPNE TF ++L ACSH+G V EGK YF++M + +   P  +H
Sbjct: 537 GDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKH 596

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           Y CMVD+L+R+G++E A  +I  MP   +   +GA L+GC +H R D+ + + K++    
Sbjct: 597 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 656

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +D  YY L+SN+YA +G W +  +VR++M+  GL K+ G+S +
Sbjct: 657 PDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIM 700



 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/606 (31%), Positives = 328/606 (54%), Gaps = 10/606 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   CTN+  L + H  L   GL  D   +T+L+  Y   G  + +RLVFD   EPD ++
Sbjct: 62  LLSKCTNIDSLRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYL 121

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W V+++CY  NN   E I  Y  +++      + ++   L+AC+ + DL +G+K+H +I+
Sbjct: 122 WKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIV 181

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K     D+V+ T +L  Y + G +  + KVF+ +T R+VV W+S+IA Y  N    EGL 
Sbjct: 182 KVP-SFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLV 240

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F+ M    V  +  T  +L  AC +L +L   +  HG +++  I++   L  S + MY 
Sbjct: 241 LFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYV 300

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGD+ +A R F +        WTAMI  Y  +G   +AL  F KM  V  +PN +T+ +
Sbjct: 301 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIAS 360

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL  C  +G L  G+S+H   I+ G+      +  AL+  YA+C +  + + V     E+
Sbjct: 361 VLSGCGLVGNLELGRSIHGLSIKVGIWDT--NVANALVHMYAKCYQNRDAKYVFEMESEK 418

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +I++WN +IS +++ G   EAL L  +M T  +MP+  +VAS  SAC ++GSL +G  +H
Sbjct: 419 DIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLH 478

Query: 423 GHVIKID---CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
            + +K+         V ++L+D Y+KCG    A L+F+ I++K+ + W++MI G+ + G+
Sbjct: 479 AYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGD 538

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDT 538
           +  ++ LF +M     + +E TF + + ACS+ G + +G K+       Y         T
Sbjct: 539 TKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 598

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            + DM A+ G+L+ A  + + M  + +V  + A +   GMH + +    + K+MLD  + 
Sbjct: 599 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--LH 656

Query: 598 PNEVTF 603
           P++ ++
Sbjct: 657 PDDASY 662


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/645 (35%), Positives = 355/645 (55%), Gaps = 7/645 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y +++R C        G +V+  +          +  ++L  +  FG L DA  VF +M 
Sbjct: 109 YVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRME 168

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R++ SW+ ++  Y       E L ++H M+  GV+PD  T   +   CG + +L   R 
Sbjct: 169 KRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGRE 228

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH HV+R   + D  + N+ I MY KCGD+ +A   F K+  R   SW AMIS Y  +G 
Sbjct: 229 IHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGV 288

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             + L  F  M++   +P+L+T+ +V+ +C  LG  R G+ +H  ++R   G +   +  
Sbjct: 289 CLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRD-PSIHN 347

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           +LI  Y+  G + E E V      R+++SW  +IS Y    M ++ALE    M+  G+MP
Sbjct: 348 SLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMP 407

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           D  ++A  LSAC  + +L +G+ +H  V K         V +SLIDMY+KC   + A  +
Sbjct: 408 DEITIAIVLSACSCLCNLDMGMNLH-EVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEI 466

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F    +K++V W S+I G   N    EA+  F +M +  L+ + VT +  + AC+ IG L
Sbjct: 467 FHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGAL 525

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             GK +H   +  GV  D ++  A+ DMY +CG ++ A + F S+ +  V SW+ ++  Y
Sbjct: 526 TCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGY 584

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPD 634
              G+   A  LF++M++S + PNEVTF++IL ACS SG V EG  YFN+M+  + + P+
Sbjct: 585 AERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPN 644

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           L+HYAC+VDLL RSG +E A++ I  MP   + ++WGALLN CRIH  +++ +   + + 
Sbjct: 645 LKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIF 704

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
              T   GYY LLSN+YA+ G WD+  +VR +M   GL   PG S
Sbjct: 705 QDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCS 749



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 176/572 (30%), Positives = 304/572 (53%), Gaps = 8/572 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +R+++++ ++  H        L+  +   G+L  +  VF   ++ + F W VL+  Y   
Sbjct: 126 SRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKA 185

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             F+E++ LYH+M+        + +P VLR C  + +L  G ++H  +I+ GF+ D  + 
Sbjct: 186 GLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVV 245

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y + G ++ AR VFDKM +RD +SW+++I+ YF+N    EGL++F  M++  V+
Sbjct: 246 NALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVD 305

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD +TM S+  AC  L   R  R IHG+VLR +   D  + NS I MYS  G +  AE  
Sbjct: 306 PDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETV 365

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGW 312
           F + E R   SWTAMIS Y      QKALE++ KM+E +   P+ IT+  VL +C+ L  
Sbjct: 366 FSRTECRDLVSWTAMISGYENCLMPQKALETY-KMMEAEGIMPDEITIAIVLSACSCLCN 424

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G ++H    +KG+   Y  +  +LI+ YA+C  + +  ++ H+  E+NI+SW  +I 
Sbjct: 425 LDMGMNLHEVAKQKGL-VSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIIL 483

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
                    EAL    +M    L P+S ++   LSAC  +G+L  G +IH H ++     
Sbjct: 484 GLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSF 542

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D F+ ++++DMY +CG    A+  F  +  + V  WN ++ G+ + G    A  LF +M 
Sbjct: 543 DGFMPNAILDMYVRCGRMEYAWKQFFSVDHE-VTSWNILLTGYAERGKGAHATELFQRMV 601

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            + +  +EVTF++ + ACS  G + +G ++ +     Y +  ++     + D+  + G L
Sbjct: 602 ESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKL 661

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQL 581
           + A      M  + +   W A+++   +H  +
Sbjct: 662 EEAYEFIQKMPMKPDPAVWGALLNSCRIHHHV 693



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 166/635 (26%), Positives = 292/635 (45%), Gaps = 59/635 (9%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  +  L R   +H H++  G   D      LI  Y + G + ++RLVFD     D
Sbjct: 213 VLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRD 272

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N    E + L+  MI+           SV+ AC  LGD   G ++HG
Sbjct: 273 RISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHG 332

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +++  F +D  I  S++  Y   G +++A  VF +   RD+VSW+++I+ Y +     +
Sbjct: 333 YVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK 392

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+ +  M  EG+ PD +T+  +  AC  LC+L    ++H    ++ +     + NS I 
Sbjct: 393 ALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLID 452

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KC  +  A   F    ++   SWT++I     +    +AL  F +M+  + +PN +T
Sbjct: 453 MYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR-RLKPNSVT 511

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP-ALIEFYAECGKMSECEKVIHA 358
           L+ VL +CA +G L  GK +H   +R G+   +D   P A+++ Y  CG+M    K   +
Sbjct: 512 LVCVLSACARIGALTCGKEIHAHALRTGVS--FDGFMPNAILDMYVRCGRMEYAWKQFFS 569

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + +  + SWN+L++ YA +G    A EL  +M    + P+  +  S L AC   G +  G
Sbjct: 570 V-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEG 628

Query: 419 LQI-----HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMI- 471
           L+      + + I  + K     + ++D+  + G    AY   +++  K    +W +++ 
Sbjct: 629 LEYFNSMKYKYSIMPNLKH---YACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685

Query: 472 -CGFYQNGN--SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
            C  + +     L A N+F          D+ T +      SN+   + GKW   K+   
Sbjct: 686 SCRIHHHVELGELAAENIFQ---------DDTTSVGYYILLSNL-YADNGKW--DKVAE- 732

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL- 587
            VRK +  +  + D    C  ++    V   +S  N             H Q+ +  +L 
Sbjct: 733 -VRKMMRQNGLIVD--PGCSWVEVKGTVHAFLSSDN------------FHPQIKEINALL 777

Query: 588 ---FKQMLDSGIKPNEVTFMNILWA------CSHS 613
              +K+M ++G++  E + M+I+ A      C HS
Sbjct: 778 ERFYKKMKEAGVEGPESSHMDIMEASKADIFCGHS 812


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/614 (34%), Positives = 353/614 (57%), Gaps = 8/614 (1%)

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-- 190
           +T +L  Y   G L  AR V D     D  ++  ++    D    ++ + +   M R   
Sbjct: 58  RTKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCP 117

Query: 191 -GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
              + D V  L+L +AC      R  R +H  V++     DG + NS + MY+K GDL +
Sbjct: 118 AAAQADVVLSLAL-KACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLEN 175

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A + F ++ +R   SWT+M+S   ++G  ++ L  F +M +    P+  T+++VL +CA 
Sbjct: 176 ARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAM 235

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           LG L +G+ +H  +I+ G+     ++  +L++ YA+C K+ +  +V   +   +I+ W  
Sbjct: 236 LGGLHQGRWIHGSVIKYGLSTN-SFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTA 294

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I  Y +     +AL+L +  +   ++P+S ++A+ +SA   +  L LG  +H   +K+ 
Sbjct: 295 MIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLG 354

Query: 430 C-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             + + V+++L+DMY+KC     A  +F RI  K VV WNSM+ G+ +NG + E++ LF+
Sbjct: 355 TMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFN 414

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M +  +  D ++ + A+ AC  +  L  GK  H   I Y    +IY++TAL ++Y+KC 
Sbjct: 415 RMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCA 474

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           DL +AQRVF+ M++RN V+WSAMI  YGM G    +  LF +ML   I PNEV F +IL 
Sbjct: 475 DLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILS 534

Query: 609 ACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSH+G V  GK YF++M R F + P ++HYACMVD+++R+G++E A + I +MP  A  
Sbjct: 535 ACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGI 594

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           S+WG+ L+GC++H R++  +   K+++        +Y L+SN+Y   G WD+   +R  M
Sbjct: 595 SVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWM 654

Query: 728 EVTGLKKVPGYSTI 741
           +  GL K+PG S++
Sbjct: 655 QEQGLVKLPGCSSV 668



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 178/608 (29%), Positives = 312/608 (51%), Gaps = 11/608 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPP--ASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           L  +C  LR L  LH  LL+          A T+L+  YA +G L S+R V D    PD+
Sbjct: 27  LLPACGTLRSLRALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTPRPDA 86

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + + V++   +      +++ L+  M R    A  ++ +    L+AC    D   G ++H
Sbjct: 87  YAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKACVRSADFRYGRRLH 146

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             ++K G   D  +  S++  Y + G L++ARKVFD++  R+VVSW+S+++    N    
Sbjct: 147 CDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAE 205

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           EGL +F+ M ++ V P   TM+S+  AC  L  L   R IHG V++  +  +  +  S +
Sbjct: 206 EGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLL 265

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KC  +  A R F ++E      WTAMI  Y ++     AL+ F+    V   PN +
Sbjct: 266 DMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSV 325

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ TV+ + A L  L  G+SVH   ++ G   E D +  AL++ YA+C  + E   +   
Sbjct: 326 TIATVISASAQLRHLPLGRSVHAIGVKLGT-MESDVVRNALVDMYAKCQALPEANSIFGR 384

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I  +++++WN +++ Y+  GM+ E+L L  +M+  G+ PD+ SV ++LSAC  +  L +G
Sbjct: 385 ILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIG 444

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
              H + IK     + +V ++L+++YSKC     A  +F  +  ++ V W++MI G+   
Sbjct: 445 KGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQ 504

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYI 536
           G+S  +I+LF++M    +  +EV F + + ACS+ G +  GK     +   + +   +  
Sbjct: 505 GDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKH 564

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDSG 595
              + D+ A+ G+L+ A     +M  +  +S W + +    +H +L       K+M  + 
Sbjct: 565 YACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKM--AA 622

Query: 596 IKPNEVTF 603
           + P    F
Sbjct: 623 LHPETPDF 630


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/626 (34%), Positives = 349/626 (55%), Gaps = 4/626 (0%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H  ++  G  +D    T ++  YG FG LD AR VFD +   D +SW  II  YF N+
Sbjct: 23  EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           +  + +  ++ M     E D V    + +AC E  +    R +H  +++     D  +  
Sbjct: 83  EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFT 141

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MY+KCG++  +   F +   R   SW++MI+ Y ++   Q  L  F +M E   E 
Sbjct: 142 GLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEA 201

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N ITL  ++ +C  LG L +GK +H  +I+ G+     YL  AL++ YA+CG + +   V
Sbjct: 202 NQITLGILVHACKKLGALHQGKWLHGYLIKCGIELG-SYLVTALLDLYAKCGVVRDARSV 260

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +   +I+SW  +I  Y + G  +EAL+L +Q +   ++P+  ++AS  S+C  + +L
Sbjct: 261 FDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNL 320

Query: 416 QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            LG  IHG  IK+  +D  V +SL+D Y+KC     A  +FE I  + VV WNS+I  F 
Sbjct: 321 NLGRSIHGLSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFS 380

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDI 534
           QNG++ EA+ LFHQM +  +  D VT ++ + AC+++  L+ G   H   +  G +  ++
Sbjct: 381 QNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNV 440

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           Y+ TAL   YAKCGD ++A+ +FD M +++ V+WSAMI  YG+ G    + S+F  ML +
Sbjct: 441 YVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKA 500

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
            +KPNE  F +IL ACSH+G + EG   F  + + + + P  +HY CMVDLL+R+G ++ 
Sbjct: 501 ELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKE 560

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A   I  MP   + S++GA L+GC +H R D+ +   K +      D  YY L+ N+YA 
Sbjct: 561 ALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYAS 620

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +  W +  +VR +M+  GL K PG S
Sbjct: 621 DARWSKVKQVRELMKQRGLMKTPGCS 646



 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 330/602 (54%), Gaps = 11/602 (1%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           C N+  L  +HA+L+V GL  D   ST+L+  Y   G L  +RLVFDT   PD   W V+
Sbjct: 15  CDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVI 74

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I+ Y  N+ F + +  Y++M        N ++  VL+ACS   +   G KVH +I+K G 
Sbjct: 75  IRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG- 133

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           + D  + T ++  Y + G ++ +R VFD+   R+V SWSS+IA Y  N    +GL +F+ 
Sbjct: 134 NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNR 193

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M  E +E + +T+  L  AC +L +L   + +HG++++  I++   L  + + +Y+KCG 
Sbjct: 194 MREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGV 253

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +  A   F ++      SWTAMI  Y ++G  ++AL+ F++  +V   PN +T+ +V  S
Sbjct: 254 VRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSS 313

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C+ L  L  G+S+H   I+  +G     +  +L++FYA+C    +   V   I +R++++
Sbjct: 314 CSQLLNLNLGRSIHGLSIK--LGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVA 371

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +IS +++ G + EALEL  QM+   ++PD+ ++ S LSAC ++ +LQ+G   H + +
Sbjct: 372 WNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAV 431

Query: 427 K--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           K  +   + +V ++L+  Y+KCG    A ++F+ + QKS V W++MI G+   GN   ++
Sbjct: 432 KRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSL 491

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTALTD 542
           ++F  M    L+ +E  F + + ACS+ G + +G W    +I   Y +       T + D
Sbjct: 492 SIFGDMLKAELKPNEEIFTSILSACSHTGMIGEG-WRLFTMICQDYNLVPSTKHYTCMVD 550

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           + A+ G L+ A      M  +  VS + A +   G+H + +      K+ML+  + P + 
Sbjct: 551 LLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLE--LHPGDA 608

Query: 602 TF 603
            +
Sbjct: 609 CY 610



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 255/486 (52%), Gaps = 20/486 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+  R      ++H  ++  G + D    T L++ YA+ G +  SR VFD   + +
Sbjct: 109 VLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRN 167

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL-RACSSLGDLGSGEKVH 118
            F W+ +I  Y+ NN  ++ ++L+++M RE+   +N I   +L  AC  LG L  G+ +H
Sbjct: 168 VFSWSSMIAGYVQNNLAQDGLVLFNRM-REELIEANQITLGILVHACKKLGALHQGKWLH 226

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G +IKCG +    + T++L  Y + G + DAR VFD++   D+VSW+++I  Y  N    
Sbjct: 227 GYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPE 286

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E LK+F    +  V P+ VT+ S+  +C +L +L   RSIHG  ++   + D  + NS +
Sbjct: 287 EALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSR-DPIVTNSLV 345

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             Y+KC     A   F  I  R   +W ++IS ++++G   +ALE F +M      P+ +
Sbjct: 346 DFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAV 405

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL++VL +CA L  L+ G S H   +++G+     Y+G AL+ FYA+CG       +   
Sbjct: 406 TLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDG 465

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + +++ ++W+ +IS Y  +G  + +L +   M    L P+     S LSAC + G +  G
Sbjct: 466 MDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEG 525

Query: 419 LQIHGHVIKIDCKD-EFVQSS-----LIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
            ++   +    C+D   V S+     ++D+ ++ G    A    +++  Q  V ++ + +
Sbjct: 526 WRLFTMI----CQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFL 581

Query: 472 --CGFY 475
             CG +
Sbjct: 582 HGCGLH 587


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/676 (34%), Positives = 366/676 (54%), Gaps = 10/676 (1%)

Query: 73  NNFFEESILLYHKMIREQA---TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              F E+I  +  + ++     T+S + Y  ++ ACS L  L  G+K+H  ++K     D
Sbjct: 40  QKLFNEAIKAFEFLQKKTGFCLTLSTYAY--LISACSYLRSLEHGKKIHDHMLKSKSHPD 97

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +Q  IL  YG+   L DA+KVFD M  R+VVSW+S+IA Y  N      L+ +  M++
Sbjct: 98  LTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQ 157

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            GV PD  T  S+ +AC  L  +   R +H HVL+ +        N+ I MY+K   ++ 
Sbjct: 158 SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIID 217

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCA 308
           A   F ++  R   SW +MI+ +++ G+  +AL  F +ML      PN     +V  +C+
Sbjct: 218 ALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L     G+ +H   I+ G+G +  + G +L + YA+CG +S    V + IG  ++++WN
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDV-FAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWN 336

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I+ +A  G +KEA+    QM+  GL+PD  +V S L AC +   L  G+Q+HG++ K+
Sbjct: 337 AIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKM 396

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINL 486
               D  V ++L+ MY+KC     A   FE ++    +V WN+++    ++  + E   L
Sbjct: 397 GLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRL 456

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
              M ++    D +T    + A +    +E G  VH   +  G+  D  +   L D+YAK
Sbjct: 457 LKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAK 516

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG L+TA ++FDSM   +VVSWS++I  Y   G   +A  LFK M    +KPN VTF+ +
Sbjct: 517 CGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGV 576

Query: 607 LWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSH G VEEG K Y    + FG+ P  +H +CMVDLL+R+G +  A   IH M F  
Sbjct: 577 LTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDP 636

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           +  +W  LL  C+ H  +DV K   + +     +++  + LL NIYA +GNW++  ++RS
Sbjct: 637 DIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRS 696

Query: 726 IMEVTGLKKVPGYSTI 741
           +M+  G++KVPG S I
Sbjct: 697 LMKQRGVRKVPGQSWI 712



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 183/641 (28%), Positives = 303/641 (47%), Gaps = 50/641 (7%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ LR L    ++H H+L +  H D      ++  Y +  SL+ ++ VFD   E +
Sbjct: 69  LISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERN 128

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N     ++  Y +M++       F + S+++ACSSLGD+G G ++H 
Sbjct: 129 VVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHA 188

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K  F    + Q +++  Y +   + DA  VF +M +RD++SW S+IA +       E
Sbjct: 189 HVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELE 248

Query: 180 GLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L  F  M+ +GV  P+     S+  AC  L      R +HG  ++  +  D   G S  
Sbjct: 249 ALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC 308

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG L  A   F +I +    +W A+I+ +   G  ++A+  F +M      P+ I
Sbjct: 309 DMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEI 368

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ ++L +C     L +G  VH  I + G+  +       L+  YA+C   SE    I  
Sbjct: 369 TVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCN-TLLTMYAKC---SELRDAIFF 424

Query: 359 IGE----RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
             E     +++SWN +++   R   ++E   LL  M      PD  ++ + L A     S
Sbjct: 425 FEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVS 484

Query: 415 LQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           +++G Q+H + +K  ++C D  V + LID+Y+KCG    A+ +F+ +    VV W+S+I 
Sbjct: 485 IEIGNQVHCYALKTGLNC-DTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLIL 543

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+ Q G   EA+ LF  M    ++ + VTF+  + ACS++G +E+G W   KL  YG   
Sbjct: 544 GYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEG-W---KL--YG--- 594

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
                              T ++ F     R     S M+D     G LN+A     QM 
Sbjct: 595 -------------------TMEKEFGIAPTRE--HCSCMVDLLARAGCLNEAEGFIHQM- 632

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
                P+ V +  +L AC   G+V+ GK    A  I  ++P
Sbjct: 633 --AFDPDIVVWKTLLAACKTHGNVDVGK--RAAENILKIDP 669


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/645 (33%), Positives = 372/645 (57%), Gaps = 4/645 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           SVL+ C+    L  G++V   I   GF  D  + + +   Y   G L +A +VFD++   
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
             + W+ ++     + D S  + +F  M+  GVE D  T   ++++   L S+     +H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
           G +L+        +GNS +  Y K   + SA + F ++ +R   SW ++I+ Y  +G  +
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           K L  FV+ML    E +L T+++V   CA    +  G++VH   ++     E D     L
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE-DRFCNTL 337

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           ++ Y++CG +   + V   + +R+++S+  +I+ YAR+G++ EA++L  +M+  G+ PD 
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFER 458
           ++V + L+ C     L  G ++H  + + D   D FV ++L+DMY+KCG    A L+F  
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEK 517
           ++ K ++ WN++I G+ +N  + EA++LF+ +        DE T    + AC+++   +K
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H  ++  G   D ++  +L DMYAKCG L  A  +FD ++ +++VSW+ MI  YGM
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQ 636
           HG   +A +LF QM  +GI+ +E++F+++L+ACSHSG V+EG  +FN MR    +EP ++
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYAC+VD+L+R+GD+  A++ I +MP P + +IWGALL GCRIH  + + + + +++   
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + GYY L++NIYAE   W++  ++R  +   GL+K PG S I
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742



 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 182/555 (32%), Positives = 302/555 (54%), Gaps = 7/555 (1%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
            G   D    ++L   Y   G L+ +  VFD  K   +  W +L+     +  F  SI L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           + KM+     + ++ +  V ++ SSL  +  GE++HG I+K GF + + +  S++  Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
              +D ARKVFD+MT RDV+SW+SII  Y  N    +GL +F  M+  G+E D  T++S+
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
              C +   +   R++H   ++     +    N+ + MYSKCGDL SA+  F ++  R  
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            S+T+MI+ Y R G   +A++ F +M E    P++ T+  VL  CA    L EGK VH  
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I    +G +  ++  AL++ YA+CG M E E V   +  ++I+SWN +I  Y++   + E
Sbjct: 423 IKENDLGFDI-FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 383 ALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLI 440
           AL L  + ++     PD  +VA  L AC ++ +   G +IHG++++     D  V +SL+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMY+KCG   LA++LF+ I  K +V W  MI G+  +G   EAI LF+QM    +E DE+
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID--TALTDMYAKCGDLQTAQRVFD 558
           +F++ + ACS+ G +++G W    ++ +  + +  ++    + DM A+ GDL  A R  +
Sbjct: 602 SFVSLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660

Query: 559 SMS-ERNVVSWSAMI 572
           +M    +   W A++
Sbjct: 661 NMPIPPDATIWGALL 675



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 257/507 (50%), Gaps = 15/507 (2%)

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           D+   FD    R V   ++ +  + ++ ++   +K+     +  ++P   T+ S+ + C 
Sbjct: 52  DSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCA 105

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSW 265
           +  SL+  + +   +      ID  LG+   +MY+ CGDL  A R F  VKIEK     W
Sbjct: 106 DSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK--ALFW 163

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
             +++   +SG F  ++  F KM+    E +  T   V  S + L  +  G+ +H  I++
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G G E + +G +L+ FY +  ++    KV   + ER+++SWN +I+ Y   G++++ L 
Sbjct: 224 SGFG-ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMY 443
           + VQM   G+  D  ++ S  + C +   + LG  +H   +K     +D F  ++L+DMY
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMY 341

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           SKCG  + A  +F  +  +SVV + SMI G+ + G + EA+ LF +M    +  D  T  
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
             +  C+    L++GK VH  +    +  DI++  AL DMYAKCG +Q A+ VF  M  +
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVEEGKFY 622
           +++SW+ +I  Y  +   N+A SLF  +L+     P+E T   +L AC+   + ++G+  
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSG 649
              +   G   D      +VD+ ++ G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCG 548



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 230/475 (48%), Gaps = 7/475 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F S  ++    +LH  +L +G          L+  Y +   + S+R VFD   E D   W
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y+ N   E+ + ++ +M+     I      SV   C+    +  G  VH   +K
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F ++D    ++L  Y + G LD A+ VF +M+ R VVS++S+IA Y       E +K+
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M  EG+ PD  T+ ++   C     L   + +H  +    +  D  + N+ + MY+K
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK 444

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLIT 302
           CG +  AE  F ++  +   SW  +I  Y+++ +  +AL  F  +LE K   P+  T+  
Sbjct: 445 CGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL +CA L    +G+ +H  I+R G   +  ++  +L++ YA+CG +     +   I  +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASK 563

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++SW ++I+ Y   G  KEA+ L  QM+  G+  D  S  S L AC + G +  G +  
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623

Query: 423 GHVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
            ++++ +CK E      + ++DM ++ G    AY   E +       +W +++CG
Sbjct: 624 -NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S +   K   +H +++  G   D   +  L++ YA+ G+L  + ++FD     D 
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + F +E+I L+++M +         + S+L ACS  G +  G
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/647 (34%), Positives = 363/647 (56%), Gaps = 13/647 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L AC++L  L     +H R++  G  +    +T +L  Y   G L  AR+V D+    D
Sbjct: 29  LLPACATLPSL---RALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPD 85

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSLA-EACGELCSLRPARSI 218
             ++   +  +      ++ L +   M R   E  D V +LSLA +A       R  R +
Sbjct: 86  PYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRL 145

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H + ++     DG + N  + MY+K GDL +A + F +I  R   SWT+M+S   ++G+ 
Sbjct: 146 HCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFA 204

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM--GPEYDYLG 336
           ++ L  F +M E +  P+  T+ +VL +C  LG L +G+ VH  +I+ GM   P   ++ 
Sbjct: 205 EEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNP---FIT 261

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            A+++ Y +CG++ +  ++   +G  +++ W  +I  Y + G   +AL L    +   ++
Sbjct: 262 AAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIV 321

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           P+S ++A+ LSA   + +L LG  IH   +K+   +++ V ++L+DMY+KC   + A  +
Sbjct: 322 PNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGI 381

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F RI  K VV WNS+I G+ +N    EA+ LF QM +     D ++ + A+ AC  +G L
Sbjct: 382 FGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDL 441

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             GK  H   +      ++Y++TAL ++Y KC DL +AQRVF  MSERN V+W AMI  Y
Sbjct: 442 LIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGY 501

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
           GM G    +  L  +ML   I+PNEV F +IL  CSH+G V  GK  F++M + F + P 
Sbjct: 502 GMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPS 561

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           ++HYACMVD+L+R+G++E A + I  MP PA+ SIWGA L+GC++H R++  +     + 
Sbjct: 562 MKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMM 621

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           V   +   +Y L+SN+Y   G WD+   +R +M+  GL K+PG S++
Sbjct: 622 VLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCSSV 668



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 180/612 (29%), Positives = 304/612 (49%), Gaps = 8/612 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  +C  L  L  LHA LL  GL     A T+L+  YA +G L S+R V D    PD + 
Sbjct: 29  LLPACATLPSLRALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYT 88

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + V +  +       +++ L+  M R   +A     +    L+A     D   G ++H  
Sbjct: 89  YRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCN 148

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +K G   D  +   ++  Y + G L++ARKVFD++  R+VVSW+S+++    N    EG
Sbjct: 149 AVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEG 207

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F+ M  E V P   TM S+  AC  L SL   R +HG V++  +  +  +  + + M
Sbjct: 208 LALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDM 267

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG++  A R F ++       WT MI  Y ++G    AL  F     V   PN +T+
Sbjct: 268 YVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTI 327

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            TVL + A L  L  G+ +H   + K +  E D +  AL++ YA+C  +SE   +   I 
Sbjct: 328 ATVLSASAQLRNLSLGRLIHAMSV-KLLVIENDVVMNALVDMYAKCKALSEANGIFGRIS 386

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +++++WN LI+ Y    M  EAL L  QM+  G  PD+ S+ ++LSAC  +G L +G  
Sbjct: 387 NKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKC 446

Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
            H + +K     + +V ++L+++Y+KC     A  +F  + +++ V W +MI G+   G+
Sbjct: 447 FHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGD 506

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY-GVRKDIYIDT 538
           S  +I+L ++M  + ++ +EV F + +  CS+ G +  GK     +  Y  +   +    
Sbjct: 507 SAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYA 566

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLN-DAASLFKQMLDSGI 596
            + D+ A+ G+L+ A      M     +S W A +    +H +L     ++ + M+    
Sbjct: 567 CMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPD 626

Query: 597 KPNEVTFMNILW 608
           KP+    M+ L+
Sbjct: 627 KPDFYVLMSNLY 638


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/649 (33%), Positives = 355/649 (54%), Gaps = 14/649 (2%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD---ARKVFDKMTS 158
           L AC+S  +L    ++HGR+++     D  +   ++          D   ARKVFD+M  
Sbjct: 25  LDACASRANLA---ELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQ 81

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR---PA 215
              + W+ +I  Y       + L++F +M R GV PD  TM ++A++     S +     
Sbjct: 82  PTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATG 141

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
            ++H  V R     D  + +  I  Y     +  A + F ++ +R   SWT MIS + + 
Sbjct: 142 DAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQC 201

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G +   L S  +M     +PN IT+I++L +C  +  + +G  V+ ++   G+  + D +
Sbjct: 202 GQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVD-I 260

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI  Y +CG MS+  K    +  RN  SWN LI  + + G  KEAL +  +M + G+
Sbjct: 261 RNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGV 320

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAY 453
           +PD  ++ S LS    +G LQ G  +H ++   +I C D  +Q+SLI+MY+KCG    A 
Sbjct: 321 IPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHC-DIILQNSLINMYAKCGDMAAAE 379

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           ++FE + ++ +V W +M+CG+ +      A NLF  M +  +   E+  ++ + ACS +G
Sbjct: 380 IIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLG 439

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L+KG+ +H  +    VR D+++++AL DMYAKCG +  A  +F  M  +  ++W+AMI 
Sbjct: 440 ALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIG 499

Query: 574 CYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
                GQ  +A +LF+Q+L     KP+ +T   +L AC+H G V+EG  YFN M   G+ 
Sbjct: 500 GLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIV 559

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           PD +HY C+VDLL R+G ++ A+  I  MP   N  IWG+LL  CR+H R+++ K I + 
Sbjct: 560 PDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQH 619

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +     ND G + L+SN++AEEG WD+  +VR +M    ++K PG+S+I
Sbjct: 620 IIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSI 668



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/614 (27%), Positives = 312/614 (50%), Gaps = 30/614 (4%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGS---LRSSRLVFDTFKEPDSFM 62
           +C +   L  LH  L+   L  DP  + RL+   A   S   +  +R VFD   +P + +
Sbjct: 27  ACASRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIV 86

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD---LGSGEKVHG 119
           W  +I+ Y   +   +++ L+  M R   +  N+   +V ++ ++        +G+ VH 
Sbjct: 87  WNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHA 146

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + + GF  D  + + ++  YG    ++DARKVF++M  RDVVSW+ +I+++        
Sbjct: 147 LVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDN 206

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+    M  EG +P+ +T++SL  ACG++ ++     ++  V    I+ D  + N+ I 
Sbjct: 207 VLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIG 266

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG +  A +TF  +  R T SW  +I  + ++G  ++AL  F +ML     P++IT
Sbjct: 267 MYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVIT 326

Query: 300 LITVLGSCAGLGWLREGK---------SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
           L++VL + A LG L++G+          +HC II          L  +LI  YA+CG M+
Sbjct: 327 LVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDII----------LQNSLINMYAKCGDMA 376

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
             E +   +  R+I+SW  ++  Y +    + A  L   M+   +M    ++ S LSAC 
Sbjct: 377 AAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACS 436

Query: 411 NVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
            +G+L  G +IH ++ +   + D +++S+L+DMY+KCG  + A  +F R++ K  + WN+
Sbjct: 437 QLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNA 496

Query: 470 MICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           MI G    G   EA+ LF Q+  L   + D +T    + AC+++G +++G    + +++ 
Sbjct: 497 MIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTL 556

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASL 587
           G+  D      + D+  + G L  A      M  + N V W +++    +H ++     +
Sbjct: 557 GIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKII 616

Query: 588 FKQMLDSGIKPNEV 601
            + ++D  + PN+V
Sbjct: 617 GQHIID--LAPNDV 628



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 251/486 (51%), Gaps = 12/486 (2%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC---GDLLSAERTF 254
           ++L+  +AC    +L     +HG ++R  +  D  +    + + +      D+  A + F
Sbjct: 20  SLLAHLDACASRANLA---ELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVF 76

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +     W  MI  YN       ALE F  M      P+  T+  V  S A     +
Sbjct: 77  DRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWK 136

Query: 315 ---EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
               G +VH  + R G   +  ++   LI FY     + +  KV   + ER+++SW ++I
Sbjct: 137 GRATGDAVHALVQRIGFASDL-FVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMI 195

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S +A+ G     L  L +MQ+ G  P+  ++ S LSACG V ++  GL ++  V +   +
Sbjct: 196 SAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIE 255

Query: 432 -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            D  ++++LI MY KCG  + A+  F+ +  ++   WN++I GF QNG   EA+ +F +M
Sbjct: 256 ADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEM 315

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
             + +  D +T ++ +   + +G L++G+++H+ +  + +  DI +  +L +MYAKCGD+
Sbjct: 316 LSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDM 375

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ +F++M+ R++VSW+AM+  Y    Q   A +LF  M    +  +E+  +++L AC
Sbjct: 376 AAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSAC 435

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           S  G++++G+   + ++   V  D+   + +VD+ ++ G I+ A ++   M      + W
Sbjct: 436 SQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLA-W 494

Query: 671 GALLNG 676
            A++ G
Sbjct: 495 NAMIGG 500


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 236/725 (32%), Positives = 386/725 (53%), Gaps = 9/725 (1%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
            G   D  A   +I +Y ++G L ++  +F      +   W ++I  +    +  E+I  
Sbjct: 255 VGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEF 314

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +  M +     +     SVL A +SL  L  G  VH   +K G   +  + +S++  Y +
Sbjct: 315 FQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAK 374

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G ++ A+KVFD +  ++VV W++++  Y  N   +E +++F +M   G  PD  T  S+
Sbjct: 375 CGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSI 434

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
             AC  L  L     +H  +++ K   +  +GN+ + MY+K G L  A + F  I  R  
Sbjct: 435 LSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDN 494

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW  +I  Y +     +A   F +M  +   P+ ++L ++L +CA +  L +GK VHC 
Sbjct: 495 VSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCL 554

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            ++ G   +  Y G +LI+ YA+CG +    K++  + ER+++S N LI+ YA+  + ++
Sbjct: 555 SVKTGQETKL-YSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQ 612

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK--DEFVQSSLI 440
           A+ L   M   G+     + AS L AC     L LG QIH  ++K+  +  DEF+  SL+
Sbjct: 613 AVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLL 672

Query: 441 DMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
            MY        A +LF      KS V+W +MI G  QN  S+ A+ L+ +M    +  D+
Sbjct: 673 GMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQ 732

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            TF++A++AC+ +  ++ G   H  +   G   D    +AL DMYAKCGD++++ +VF  
Sbjct: 733 ATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKE 792

Query: 560 MS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           MS +++V+SW++MI  +  +G   DA  +F +M  S + P++VTF+ +L ACSHSG V E
Sbjct: 793 MSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSE 852

Query: 619 GKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           G+  F+ M  ++G++P   H ACMVDLL R G ++ A + I+ + F  +  +W  +L  C
Sbjct: 853 GRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGAC 912

Query: 678 RIH-KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           RIH   I   +  EK + +   N +  Y LLSNIYA  GNWDE   +R  M   G+KK+P
Sbjct: 913 RIHGDDIRGQQAAEKLIELEPQNSSP-YVLLSNIYAASGNWDEVNTLRREMREKGVKKLP 971

Query: 737 GYSTI 741
           G S I
Sbjct: 972 GCSWI 976



 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 188/664 (28%), Positives = 318/664 (47%), Gaps = 41/664 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  L  G          +++ YA+   +  +   F   ++ D   W  ++  +    F
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
               ++ Y  ++       N F +  VL +C+ L  +  G +VH  ++K GF+     + 
Sbjct: 141 -PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEG 199

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y +   L DAR +FD     D VSW+S+I  Y       E +K+F  M + G EP
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP 259

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D V  +++  A                                   Y   G L +A   F
Sbjct: 260 DQVAFVTVINA-----------------------------------YVDLGRLDNASDLF 284

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  R   +W  MIS + + G+  +A+E F  M +   +    TL +VL + A L  L 
Sbjct: 285 SRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G  VH + +++G+     Y+G +L+  YA+CGKM   +KV   + E+N++ WN ++  Y
Sbjct: 345 FGLLVHAEALKQGLHSNV-YVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGY 403

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
            + G + E +EL   M++ G  PD F+ +S LSAC  +  L LG Q+H  +IK     + 
Sbjct: 404 VQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNL 463

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           FV ++L+DMY+K G    A   FE I+ +  V WN +I G+ Q  + +EA +LF +M L 
Sbjct: 464 FVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLL 523

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +  DEV+  + + AC+++  LE+GK VH   +  G    +Y  ++L DMYAKCG + +A
Sbjct: 524 GILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSA 583

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
            ++   M ER+VVS +A+I  Y     L  A +LF+ ML  GI   E+TF ++L AC   
Sbjct: 584 HKILACMPERSVVSMNALIAGYA-QINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQ 642

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYAC-MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
             +  G+   + +   G++ D +     ++ +   S     A  +      P +  +W A
Sbjct: 643 QKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTA 702

Query: 673 LLNG 676
           +++G
Sbjct: 703 MISG 706



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 177/680 (26%), Positives = 332/680 (48%), Gaps = 43/680 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC  L  +    ++H +++  G          LI  YA+   L  +R +FD   E D
Sbjct: 166 VLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELD 225

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+     EE++ ++ +M                            EKV  
Sbjct: 226 KVSWTSMIGGYIKVGLPEEAVKVFQEM----------------------------EKV-- 255

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
                G + D V   +++  Y + G LD+A  +F +M +R+VV+W+ +I+ +       E
Sbjct: 256 -----GQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVE 310

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            ++ F +M + G++    T+ S+  A   L +L     +H   L++ +  +  +G+S + 
Sbjct: 311 AIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVS 370

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG + +A++ F  + ++    W AM+  Y ++G+  + +E F  M      P+  T
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFT 430

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++L +CA L +L  G  +H  II+        ++G AL++ YA+ G + +  +    I
Sbjct: 431 YSSILSACACLKYLDLGHQLHSVIIKNKFASNL-FVGNALVDMYAKSGALEDARQQFELI 489

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+ +SWN++I  Y ++    EA  L  +M   G++PD  S+AS LSAC +V  L+ G 
Sbjct: 490 RNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGK 549

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H   +K   + + +  SSLIDMY+KCG  + A+ +   + ++SVV  N++I G+ Q  
Sbjct: 550 QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI- 608

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR-KDIYID 537
           N  +A+NLF  M +  +   E+TF + + AC    +L  G+ +H  ++  G++  D ++ 
Sbjct: 609 NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLG 668

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +L  MY        A  +F   S  ++ V W+AMI     +     A  L+K+M    +
Sbjct: 669 VSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNV 728

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            P++ TF++ L AC+   S+++G    + +   G + D    + +VD+ ++ GD++ + +
Sbjct: 729 LPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQ 788

Query: 657 MIHSMPFPANGSIWGALLNG 676
           +   M    +   W +++ G
Sbjct: 789 VFKEMSRKKDVISWNSMIVG 808



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 293/569 (51%), Gaps = 6/569 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  L  GLH +    + L+  YA+ G + +++ VFDT  E +  +W  ++  Y+ N +
Sbjct: 349 VHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGY 408

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E + L+  M        +F Y S+L AC+ L  L  G ++H  IIK  F  +  +  +
Sbjct: 409 ANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNA 468

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L+DAR+ F+ + +RD VSW+ II  Y    D  E   +F  M   G+ PD
Sbjct: 469 LVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPD 528

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            V++ S+  AC  +  L   + +H   ++   +     G+S I MY+KCG + SA +   
Sbjct: 529 EVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILA 588

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +R   S  A+I+ Y +    ++A+  F  ML        IT  ++L +C     L  
Sbjct: 589 CMPERSVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNL 647

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEY 374
           G+ +H  I++ G+  + ++LG +L+  Y    + ++   +       ++ + W  +IS  
Sbjct: 648 GRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGL 707

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
           ++   S  AL+L  +M++  ++PD  +  S+L AC  V S++ G + H  +       DE
Sbjct: 708 SQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDE 767

Query: 434 FVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              S+L+DMY+KCG  K+   +  E  ++K V+ WNSMI GF +NG + +A+ +F +M  
Sbjct: 768 LTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQ 827

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQ 551
           + +  D+VTFL  + ACS+ G++ +G+ +   +++ YG++        + D+  + G L+
Sbjct: 828 SHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLK 887

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHG 579
            A+   + ++ E +   W+ M+    +HG
Sbjct: 888 EAEEFINKLNFEPDAKVWATMLGACRIHG 916



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 13/241 (5%)

Query: 389 QMQTWGL---MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSK 445
           Q++T  L   +P   S  S+ +   +  SL+LG    G           + + ++D+Y+K
Sbjct: 57  QVKTHSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSKG----------VLGNVIVDLYAK 106

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C   + A   F++++ K ++ WNS++    + G     +  F  ++ + +  +E TF   
Sbjct: 107 CADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIV 166

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + +C+ +  ++ G+ VH  ++  G     Y + AL  MYAKC  L  A+ +FD   E + 
Sbjct: 167 LSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDK 226

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           VSW++MI  Y   G   +A  +F++M   G +P++V F+ ++ A    G ++     F+ 
Sbjct: 227 VSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSR 286

Query: 626 M 626
           M
Sbjct: 287 M 287



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 4   FRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEPD 59
            R+C   ++++  T  H+ +  TG   D   S+ L++ YA+ G ++SS  VF    ++ D
Sbjct: 739 LRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKD 798

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  N + E+++ ++ +M +   T  +  +  VL ACS  G +  G  +  
Sbjct: 799 VISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFD 858

Query: 120 RIIKC-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIAS 170
            ++   G          ++   G +G L +A +  +K+    D   W++++ +
Sbjct: 859 MMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGA 911


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 242/724 (33%), Positives = 383/724 (52%), Gaps = 9/724 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           GL  D  A   +I +   +G L  +  +F      +   W V+I  ++      E+I  +
Sbjct: 278 GLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFF 337

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M +     +     SVL A +SL  L  G  VH + IK G + +  + +S++  Y + 
Sbjct: 338 KNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKC 397

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
             ++ A+KVFD +  R++V W++++  Y  N   S+ +K+F  M   G  PD  T  S+ 
Sbjct: 398 EKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSIL 457

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC  L  L   R +H  +++   + +  + N+ + MY+KCG L  A + F  I  R   
Sbjct: 458 SACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNV 517

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW A+I  Y +     +A   F +M+     P+ ++L ++L  CA L  L +G+ VHC +
Sbjct: 518 SWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFL 577

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           ++ G+     Y G +LI+ Y +CG +     V   +  R+++S N +I+ YA+  +  EA
Sbjct: 578 VKSGLQTCL-YAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EA 635

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLID 441
           ++L  +MQ  GL P   + AS L AC     L LG QIH  + K  +    +F+  SL+ 
Sbjct: 636 IDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLV 695

Query: 442 MYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           MY     K  A +LF   Q  KS ++W ++I G  QNG S EA+ L+ +M+ N    D+ 
Sbjct: 696 MYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQA 755

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TF + ++ACS +  L  G+ +H  +   G+  D    +A+ DMYAKCGD++++ +VF+ M
Sbjct: 756 TFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEM 815

Query: 561 SERN-VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
             +N V+SW++MI  +  +G   +A  +F +M  + I+P++VTF+ +L ACSH+G V EG
Sbjct: 816 GSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEG 875

Query: 620 KFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
           +  F+ M   + + P L H ACM+DLL R G ++ A + I  + F  N  IW  LL  CR
Sbjct: 876 REIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACR 935

Query: 679 IH-KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           IH   I   +  EK + +   N +  Y LLSNIYA  GNWDE   VR  M   GL+K+PG
Sbjct: 936 IHGDDIRGRRAAEKLIELEPENSSP-YVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPG 994

Query: 738 YSTI 741
            S I
Sbjct: 995 CSWI 998



 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 316/602 (52%), Gaps = 38/602 (6%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           R    +HA  L  G        + +++ YA+ G++  +   F+  ++ D   W  ++  Y
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
                 E+ I  +  +     + + F Y  VL +C+ L D+  G++VH  +IK GF+ + 
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
             + S++  Y + G L DARK+FD +   D VSW+++IA Y       E LK+F  M + 
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G+ PD V  +++  AC  L                                   G L  A
Sbjct: 278 GLVPDQVAFVTVITACVGL-----------------------------------GRLDDA 302

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              FV++      +W  MIS + + G   +A++ F  M +   +    TL +VL + A L
Sbjct: 303 CDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASL 362

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L  G  VH Q I++G+     Y+G +LI  YA+C KM   +KV  A+ ERN++ WN +
Sbjct: 363 EALNYGLLVHAQAIKQGLNSNV-YVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAM 421

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           +  YA+ G + + ++L  +M+  G  PD F+  S LSAC  +  L++G Q+H  +IK + 
Sbjct: 422 LGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNF 481

Query: 431 K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           + + FV+++L+DMY+KCG    A   FE I+ +  V WN++I G+ Q  +  EA N+F +
Sbjct: 482 EYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRR 541

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L+ +  DEV+  + +  C+N+  LE+G+ VH  L+  G++  +Y  ++L DMY KCG 
Sbjct: 542 MILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGA 601

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A+ VF  M  R+VVS +A+I  Y  +  L +A  LF++M + G+ P+E+TF ++L A
Sbjct: 602 IEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDA 660

Query: 610 CS 611
           C+
Sbjct: 661 CT 662



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 163/569 (28%), Positives = 297/569 (52%), Gaps = 6/569 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +  GL+ +    + LI  YA+   + +++ VFD   E +  +W  ++  Y  N +
Sbjct: 371 VHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGY 430

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             + + L+ +M         F Y S+L AC+ L  L  G ++H  IIK  F+ +  ++ +
Sbjct: 431 ASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENT 490

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L++AR+ F+ + +RD VSW++II  Y    D  E   MF  M+ +G+ PD
Sbjct: 491 LVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPD 550

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            V++ S+   C  L +L     +H  +++  ++     G+S I MY KCG + +A   F 
Sbjct: 551 EVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFS 610

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   S  A+I+ Y ++   + A++ F +M      P+ IT  ++L +C G   L  
Sbjct: 611 CMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNL 669

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEY 374
           G+ +HC I ++G+  + D+LG +L+  Y    + ++ + +       ++ + W  +IS +
Sbjct: 670 GRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGH 729

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
            + G S+EAL+L  +M      PD  + AS L AC  + SL  G  IH  +  +    DE
Sbjct: 730 TQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDE 789

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              S+++DMY+KCG    +  +FE +  K+ V+ WNSMI GF +NG +  A+ +F +M  
Sbjct: 790 LTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKH 849

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQ 551
             +  D+VTFL  + ACS+ G++ +G+ +   ++ SY +   +     + D+  + G L+
Sbjct: 850 TRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLK 909

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHG 579
            A+   D ++ E N + W+ ++    +HG
Sbjct: 910 EAEEFIDKLNFEPNAMIWATLLGACRIHG 938



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 286/551 (51%), Gaps = 37/551 (6%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           + + +H + +K GF     + ++I+  Y + G ++ A K F+++  RD+++W+S+++ Y 
Sbjct: 99  TSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYS 158

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
               + + +  F S+   GV P+  T   +  +C  L  +   + +H  V++   + +  
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
              S I MYSKCG L+ A + F  +    T SWTAMI+ Y + G  ++AL+ F  M ++ 
Sbjct: 219 CEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLG 278

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             P+ +  +TV+ +C GLG L +   +  Q                              
Sbjct: 279 LVPDQVAFVTVITACVGLGRLDDACDLFVQ------------------------------ 308

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
                 +   N+++WN++IS + ++G   EA++    M   G+     ++ S LSA  ++
Sbjct: 309 ------MPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASL 362

Query: 413 GSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
            +L  GL +H   IK       +V SSLI+MY+KC     A  +F+ + ++++V+WN+M+
Sbjct: 363 EALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAML 422

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G+ QNG + + + LF +M       DE T+ + + AC+ +  LE G+ +H  +I +   
Sbjct: 423 GGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFE 482

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            +++++  L DMYAKCG L+ A++ F+ +  R+ VSW+A+I  Y      ++A ++F++M
Sbjct: 483 YNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRM 542

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           +  GI P+EV+  +IL  C++  ++E+G+     +   G++  L   + ++D+  + G I
Sbjct: 543 ILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAI 602

Query: 652 EGAFKMIHSMP 662
           E A  +   MP
Sbjct: 603 EAARYVFSCMP 613



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 240/465 (51%), Gaps = 38/465 (8%)

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           R +++IH   L+      G LG++ + +Y+KCG++  A + F ++EKR   +W +++S Y
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           +R G  ++ +  F  +      PN  T   VL SCA L  +  GK VHC +I+  MG E+
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIK--MGFEF 215

Query: 333 D-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           + +   +LI+ Y++CG + +  K+  A+ + + +SW  +I+ Y + G+ +EAL++   MQ
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
             GL+PD  +  + ++AC  +G L             D  D FVQ               
Sbjct: 276 KLGLVPDQVAFVTVITACVGLGRLD------------DACDLFVQ--------------- 308

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
                  +   +VV WN MI G  + G  +EAI+ F  M+   ++    T  + + A ++
Sbjct: 309 -------MPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIAS 361

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  L  G  VH + I  G+  ++Y+ ++L +MYAKC  ++ A++VFD++ ERN+V W+AM
Sbjct: 362 LEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAM 421

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           +  Y  +G  +    LF +M   G  P+E T+ +IL AC+    +E G+   + +     
Sbjct: 422 LGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNF 481

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           E +L     +VD+ ++ G +E A +    +    N S W A++ G
Sbjct: 482 EYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVS-WNAIIVG 525



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 238/464 (51%), Gaps = 10/464 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH+ ++     Y+      L++ YA+ G+L  +R  F+  +  D+  W  +I  Y+   
Sbjct: 471 QLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEE 530

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E+  ++ +MI +          S+L  C++L  L  GE+VH  ++K G        +
Sbjct: 531 DEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGS 590

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y + G ++ AR VF  M SR VVS ++IIA Y  N D+ E + +F  M  EG+ P
Sbjct: 591 SLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNP 649

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAERT 253
             +T  SL +AC     L   R IH  + +R +  DG  LG S +VMY        A+  
Sbjct: 650 SEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADIL 709

Query: 254 FVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           F + +  + T  WTA+IS + ++G  ++AL+ + +M      P+  T  +VL +C+ L  
Sbjct: 710 FSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILAS 769

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN-ILSWNMLI 371
           L +G+ +H  I   G+  + +  G A+++ YA+CG M    +V   +G +N ++SWN +I
Sbjct: 770 LGDGRMIHSLIFHVGLDSD-ELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG---HVIKI 428
             +A+ G ++ AL++  +M+   + PD  +    L+AC + G +  G +I     H  KI
Sbjct: 829 VGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKI 888

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
             + +   + +ID+  + GF   A    +++  + + ++W +++
Sbjct: 889 VPRLDHC-ACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLL 931



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 157/323 (48%), Gaps = 22/323 (6%)

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           P   + AS  S   +  +L+ G    G +           S+++D+Y+KCG    A   F
Sbjct: 90  PQRLAQASRTSKTIHAQTLKFGFGSKGRL----------GSAIVDLYAKCGNVEFAAKAF 139

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
            +++++ ++ WNS++  + + G+  + I  F  +    +  ++ T+   + +C+ +  ++
Sbjct: 140 NQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDID 199

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK VH  +I  G   + + + +L DMY+KCG L  A+++FD++ + + VSW+AMI  Y 
Sbjct: 200 LGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYV 259

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
             G   +A  +F+ M   G+ P++V F+ ++ AC   G +++      A  +F   P+  
Sbjct: 260 QVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDD------ACDLFVQMPNTN 313

Query: 637 HYACMVDL---LSRSGDIEGA--FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
             A  V +   + R  DIE    FK +      +  S  G++L+     + ++    +  
Sbjct: 314 VVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHA 373

Query: 692 ELSVTGTNDNGYY-TLLSNIYAE 713
           +    G N N Y  + L N+YA+
Sbjct: 374 QAIKQGLNSNVYVGSSLINMYAK 396


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/667 (33%), Positives = 379/667 (56%), Gaps = 22/667 (3%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVF 153
           N+ +P++L+A + L D+  G+++H  + K G+  D V +  +++  Y + G      KVF
Sbjct: 10  NYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 69

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC--- 210
           D+++ R+ VSW+S+I+S          L+ F  M+ E VEP   T++S+  AC  L    
Sbjct: 70  DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 129

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            L   + +H + LR K +++  + N+ + MY K G L S++        R   +W  ++S
Sbjct: 130 GLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 188

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
              ++    +ALE   +M+    EP+  T+ +VL +C+ L  LR GK +H   ++ G   
Sbjct: 189 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 248

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           E  ++G AL++ Y  C ++    +V   + +R I  WN +I+ Y++    KEAL L + M
Sbjct: 249 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 308

Query: 391 Q-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCG 447
           + + GL+ +S ++A  + AC   G+      IHG V+K  +D +D FVQ++L+DMYS+ G
Sbjct: 309 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD-RDRFVQNTLMDMYSRLG 367

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-----------LNCLE 496
             ++A  +F +++ + +V WN+MI G+  + +  +A+ L H+M               L+
Sbjct: 368 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 427

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            + +T +T + +C+ +  L KGK +H   I   +  D+ + +AL DMYAKCG LQ +++V
Sbjct: 428 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 487

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           FD + ++NV++W+ +I  YGMHG   +A  L + M+  G+KPNEVTF+++  ACSHSG V
Sbjct: 488 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 547

Query: 617 EEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIWGALL 674
           +EG   F  M+  +GVEP   HYAC+VDLL R+G I+ A+++++ MP   N    W +LL
Sbjct: 548 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
              RIH  +++ +   + L     N   +Y LL+NIY+  G WD+  +VR  M+  G++K
Sbjct: 608 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 667

Query: 735 VPGYSTI 741
            PG S I
Sbjct: 668 EPGCSWI 674



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 305/603 (50%), Gaps = 26/603 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDP-PASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L ++  +L+ +    ++HAH+   G   D    +  L+  Y + G   +   VFD   E 
Sbjct: 16  LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 75

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG---DLGSGE 115
           +   W  LI        +E ++  +  M+ E    S+F   SV+ ACS+L     L  G+
Sbjct: 76  NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 135

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH   ++ G + +  I  +++  YG+ G L  ++ +      RD+V+W+++++S   N 
Sbjct: 136 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 194

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLG 234
            + E L+    MV EGVEPD  T+ S+  AC  L  LR  + +H + L+   +  +  +G
Sbjct: 195 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 254

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-VKE 293
           ++ + MY  C  +LS  R F  +  R    W AMI+ Y+++   ++AL  F+ M E    
Sbjct: 255 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 314

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N  T+  V+ +C   G     +++H  ++++G+  +  ++   L++ Y+  GK+    
Sbjct: 315 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR-FVQNTLMDMYSRLGKIDIAM 373

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-----------GLMPDSFSV 402
           ++   + +R++++WN +I+ Y      ++AL LL +MQ              L P+S ++
Sbjct: 374 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 433

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
            + L +C  + +L  G +IH + IK +   D  V S+L+DMY+KCG   ++  +F++I Q
Sbjct: 434 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 493

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K+V+ WN +I  +  +GN  EAI+L   M +  ++ +EVTF++   ACS+ G +++G  +
Sbjct: 494 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 553

Query: 522 HHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMH 578
            + +   YGV         + D+  + G ++ A ++ + M        +WS+++    +H
Sbjct: 554 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 613

Query: 579 GQL 581
             L
Sbjct: 614 NNL 616



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 266/525 (50%), Gaps = 25/525 (4%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVMYSKCG 245
           M+  G++PD     +L +A  +L  +   + IH HV +    +D   + N+ + +Y KCG
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           D  +  + F +I +R   SW ++IS       ++ ALE+F  ML+   EP+  TL++V+ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 306 SCAGLGW---LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +C+ L     L  GK VH   +RK  G    ++   L+  Y + GK++  + ++ + G R
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRK--GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           ++++WN ++S   +     EALE L +M   G+ PD F+++S L AC ++  L+ G ++H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238

Query: 423 GHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
            + +K    DE  FV S+L+DMY  C        +F+ +  + + +WN+MI G+ QN + 
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 298

Query: 481 LEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
            EA+ LF  M  +  L  +  T    + AC   G   + + +H  ++  G+ +D ++   
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 358

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD------ 593
           L DMY++ G +  A R+F  M +R++V+W+ MI  Y       DA  L  +M +      
Sbjct: 359 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418

Query: 594 -----SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
                  +KPN +T M IL +C+   ++ +GK          +  D+   + +VD+ ++ 
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 478

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRIDVMKTI 689
           G ++ + K+   +P   N   W  ++    +H    + ID+++ +
Sbjct: 479 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMM 522



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 248/519 (47%), Gaps = 25/519 (4%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y ++G L SS+++  +F   D   W  ++     N    E++    +M+ E     
Sbjct: 155 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 214

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVF 153
            F   SVL ACS L  L +G+++H   +K G  D++  + ++++  Y     +   R+VF
Sbjct: 215 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 274

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSL 212
           D M  R +  W+++IA Y  N    E L +F  M    G+  +  TM  +  AC    + 
Sbjct: 275 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 334

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
               +IHG V++R +  D  + N+ + MYS+ G +  A R F K+E R   +W  MI+ Y
Sbjct: 335 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 394

Query: 273 NRSGWFQKALESFVKMLEVKE-----------EPNLITLITVLGSCAGLGWLREGKSVHC 321
             S   + AL    KM  ++            +PN ITL+T+L SCA L  L +GK +H 
Sbjct: 395 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 454

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             I+  +  +   +G AL++ YA+CG +    KV   I ++N+++WN++I  Y   G  +
Sbjct: 455 YAIKNNLATDV-AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 513

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-----CKDEFVQ 436
           EA++LL  M   G+ P+  +  S  +AC + G +  GL+I  +V+K D       D +  
Sbjct: 514 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHY-- 570

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++D+  + G    AY L   + +       W+S++ G  +  N+LE   +  Q  +  
Sbjct: 571 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL-GASRIHNNLEIGEIAAQNLIQL 629

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
                  ++      S+ G  +K   V   +   GVRK+
Sbjct: 630 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 668



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M +  SC  L  L +   +HA+ +   L  D    + L++ YA+ G L+ SR VFD   +
Sbjct: 434 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 493

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V+I  Y  +   +E+I L   M+ +    +   + SV  ACS  G +  G ++
Sbjct: 494 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 553


>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 989

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/730 (31%), Positives = 396/730 (54%), Gaps = 10/730 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  L  G+  D   +  LI  YA +  L SSR++FD     D   +  +I  YM +  
Sbjct: 263 LHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGK 322

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           ++ES  ++ +M       +     SVL  CS    +  G+ VHG +IK G  +   + ++
Sbjct: 323 WKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSA 382

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G LD A+ +FD  T ++ + W+SII+ Y  N + +  L  F  M  E V PD
Sbjct: 383 LVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPD 442

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T++ +   C  +  LR A+SIH + +R + +++  + N+ + MY  CG+L S+ + F 
Sbjct: 443 ATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQ 502

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+E R   SW  +IS Y      + +++ F +M +   + +++TLI ++ S +       
Sbjct: 503 KMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTV 562

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+S+H   ++ G   +   L   LI  Y+ CG +  C+++   +  RN +S+N+L++ Y 
Sbjct: 563 GESLHSLAVKSGCNMDIS-LTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYR 621

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEF 434
           +  +S+E L L  QM      P+  +V + L  C N    Q G  +H + I+     +  
Sbjct: 622 KNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQN---HQQGKSVHCYAIRNFSTLETS 678

Query: 435 VQSSLIDMYSKCGFKNLAY--LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             +S I MYS+  F N+ Y   LF  + ++++++WN+++    Q   +  A + F QM+ 
Sbjct: 679 FFTSAICMYSR--FNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHF 736

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             ++ DEVT ++ + AC+ +G  + G+ V   ++  G    + +  AL DM+++CG L  
Sbjct: 737 LNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSF 796

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A+ +FDS   ++ V+WSAMI+ Y MHG    A ++F  M+DSG+KP+++TF+ IL ACSH
Sbjct: 797 ARELFDSSVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACSH 856

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           SG VE+ +  F +++I  G+ P ++HYACMVDLL RSG ++ A+ ++ SM F  + S+  
Sbjct: 857 SGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFRPSESLLE 916

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL  CR H    + + +   L  +   +   Y +LSNIYA  G W+++  +R  ME  G
Sbjct: 917 SLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLSNIYASVGKWNDYEWLRVDMEAKG 976

Query: 732 LKKVPGYSTI 741
           L+K  G S +
Sbjct: 977 LRKDAGVSLV 986



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 182/682 (26%), Positives = 355/682 (52%), Gaps = 14/682 (2%)

Query: 2   PLFRSCT-NLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KE 57
           P F   T +L+ L++LHA L V G +  D    T +++ Y   G   S+  VF     + 
Sbjct: 45  PEFLHATRSLKCLSKLHALLAVAGAIARDTSVVTAVVDRYLSFGRPASAASVFAGAYRRR 104

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           P  +   + ++C+  + F  E + LY  +    +   NF +P V++AC+++  L  G ++
Sbjct: 105 PTVYSLNLAVRCFSDHGFHRELLDLYRTLCTFGS--DNFTFPPVIKACAAVSCLPLGREM 162

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H R+++ G + +  +QT++L  Y + G +  +R VFD M  +D++SW+++I+ Y  N  +
Sbjct: 163 HCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSL 222

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E ++    M ++G+  +  T++ +A ACG         S+H   L+  +  D  L  + 
Sbjct: 223 REAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPAL 282

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I +Y+   DL S+   F     +   S+ +MIS Y + G ++++ + F +M      PNL
Sbjct: 283 ISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNL 342

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T+I+VL +C+    +  G SVH  +I+ G+  +   +  AL+  Y++ G++   + +  
Sbjct: 343 VTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVS-ALVSMYSKLGELDSAKHLFD 401

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  E+N L WN +IS Y        AL+   +MQ   + PD+ +V   +  C ++  L++
Sbjct: 402 SCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRM 461

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
              IH + ++   + ++ V ++L+ MY  CG  + +Y LF++++ + ++ WN++I G+ +
Sbjct: 462 AKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAE 521

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
             +   ++ LF QM    L+ D VT +  I + S       G+ +H   +  G   DI +
Sbjct: 522 IRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISL 581

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              L  MY+ CG ++  QR+FD++S RN VS++ ++  Y  +    +   LF+QM+ +  
Sbjct: 582 TNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQ 641

Query: 597 KPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           +PN +T +N+L  C +    ++GK  +  A+R F    +   +   + + SR  +++ + 
Sbjct: 642 EPNHITVLNLLPVCQNH---QQGKSVHCYAIRNFST-LETSFFTSAICMYSRFNNVDYSC 697

Query: 656 KMIHSMPFPANGSIWGALLNGC 677
           K+ +S+    N  +W A+L+ C
Sbjct: 698 KLFNSVG-ERNIIVWNAILSAC 718



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 181/687 (26%), Positives = 333/687 (48%), Gaps = 17/687 (2%)

Query: 2   PLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           P+ ++C  +  L     +H  +L TG   +    T L++ YA+ G + +SR VFD   + 
Sbjct: 145 PVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQK 204

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  +I  Y  N    E++    +M ++    +      +  AC + GD  +G  +H
Sbjct: 205 DLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLH 264

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +KCG   D+ +  +++  Y     L  +R +FD    +D+VS++S+I++Y  +    
Sbjct: 265 AFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWK 324

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E   +F  M   G+ P+ VT++S+   C +   +    S+HG V++  +     + ++ +
Sbjct: 325 ESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALV 384

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSK G+L SA+  F    ++    W ++IS Y  +  +  AL++F KM      P+  
Sbjct: 385 SMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDAT 444

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+I V+  C  +  LR  KS+H   +R         +  AL+  Y +CG++S   K+   
Sbjct: 445 TVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMN-ALLAMYGDCGELSSSYKLFQK 503

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R ++SWN +IS YA     + +++L  QM+  GL  D  ++   +S+        +G
Sbjct: 504 MEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVG 563

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +H   +K  C  D  + ++LI MYS CG       LF+ +  ++ V +N ++ G+ +N
Sbjct: 564 ESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKN 623

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
             S E + LF QM  N  E + +T L  +  C N    ++GK VH     Y +R    ++
Sbjct: 624 NLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQN---HQQGKSVH----CYAIRNFSTLE 676

Query: 538 TALTD----MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           T+       MY++  ++  + ++F+S+ ERN++ W+A++         + A   F+QM  
Sbjct: 677 TSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHF 736

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
             +KP+EVT M+++ AC+  G+ + G+     +   G    L     ++D+ SR G +  
Sbjct: 737 LNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSF 796

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIH 680
           A ++  S     +   W A++N   +H
Sbjct: 797 ARELFDS-SVVKDSVTWSAMINSYSMH 822


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/649 (33%), Positives = 365/649 (56%), Gaps = 3/649 (0%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           +F +P VL+AC  + D+  G ++HG IIKCG+D    +  S++  Y +   +  ARK+FD
Sbjct: 10  SFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFD 69

Query: 155 KMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           +M  R DVVSW+SII++Y  N    E L +F  M + GV  +  T+++  +AC +    +
Sbjct: 70  RMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKK 129

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
               IH  +L+    +D  + N+ + M+ + G +  A R F +++++   +W +MI+ + 
Sbjct: 130 LGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFT 189

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++G + +AL+ F  + +   +P+ ++LI++L +   LG+L  GK +H   ++  +     
Sbjct: 190 QNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLR 249

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +G  LI+ Y++C  ++    V   +  ++++SW  +I+ YA+     EAL+LL ++QT 
Sbjct: 250 -IGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTK 308

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
           G+  D+  + S+L AC  +  L    ++HG+ +K    D  +Q+ +ID+Y+ CG  N A 
Sbjct: 309 GMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYAT 368

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +FE I+ K VV W SMI  +  NG + EA+ +F+ M    +E D +T ++ + A +++ 
Sbjct: 369 RMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLS 428

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L KGK +H  +   G   +     +L DMYA CG L+ A +VF     +++V W+ MI+
Sbjct: 429 ALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMIN 488

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            YGMHG+   A  LF  M D  + P+ +TF+ +L+ACSHSG + EGK     M+  + +E
Sbjct: 489 AYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLE 548

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P  +HYAC+VDLL R+  +E A+  + SM       +W A L  CRIH    + +   ++
Sbjct: 549 PWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQK 608

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L     +  G Y L+SN++A  G W +  +VR  M+  GLKK PG S I
Sbjct: 609 LLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWI 657



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 259/495 (52%), Gaps = 7/495 (1%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           GV  D  T   + +ACG +  +     IHG +++        + NS + MY+KC D+L A
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 251 ERTFVKIEKRC-TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
            + F ++ +R    SW ++IS Y+ +G   +AL  F +M +     N  TL+  L +C  
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
             + + G  +H  I++     +  Y+  AL+  +   GKMS   ++   + E++ ++WN 
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDV-YVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-- 427
           +I+ + + G+  EAL+    +Q   L PD  S+ S L+A G +G L  G +IH + +K  
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
           +D  +  + ++LIDMYSKC     A L+F+++  K ++ W ++I  + QN    EA+ L 
Sbjct: 244 LD-SNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLL 302

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            ++    +++D +   + + ACS +  L   K VH   +  G+  D+ +   + D+YA C
Sbjct: 303 RKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADC 361

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G++  A R+F+S+  ++VVSW++MI CY  +G  N+A  +F  M ++ ++P+ +T ++IL
Sbjct: 362 GNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSIL 421

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            A +   ++ +GK     +   G   +      +VD+ +  G +E A+K +       + 
Sbjct: 422 SAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYK-VFICTRSKSL 480

Query: 668 SIWGALLNGCRIHKR 682
            +W  ++N   +H R
Sbjct: 481 VLWTTMINAYGMHGR 495



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 163/625 (26%), Positives = 298/625 (47%), Gaps = 11/625 (1%)

Query: 3   LFRSCTNLRKLTR-LHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKE-P 58
           + ++C  +  + R    H L+    YD     +  L+  YA+   +  +R +FD   E  
Sbjct: 16  VLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERN 75

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  +I  Y  N    E++ L+ +M +     + +   + L+AC        G ++H
Sbjct: 76  DVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIH 135

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I+K     D  +  +++  +  FG +  A ++FD++  +D ++W+S+IA +  N   +
Sbjct: 136 AAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYN 195

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L+ F  +    ++PD V+++S+  A G L  L   + IH + ++  +  +  +GN+ I
Sbjct: 196 EALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLI 255

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKC  +  A   F K+  +   SWT +I+ Y ++    +AL+   K+     + + +
Sbjct: 256 DMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTM 315

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + + L +C+GL  L   K VH   +++G+      +   +I+ YA+CG ++   ++  +
Sbjct: 316 MIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDL--MMQNMIIDVYADCGNINYATRMFES 373

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I  ++++SW  +IS Y   G++ EAL +   M+   + PDS ++ S LSA  ++ +L  G
Sbjct: 374 IKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKG 433

Query: 419 LQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            +IHG + +     E    +SL+DMY+ CG    AY +F   + KS+V+W +MI  +  +
Sbjct: 434 KEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMH 493

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYI 536
           G    A+ LF  M    L  D +TFL  + ACS+ G + +GK +   +   Y +      
Sbjct: 494 GRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEH 553

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHG--QLNDAASLFKQMLD 593
              L D+  +   L+ A     SM  E     W A +    +H   +L + A+     LD
Sbjct: 554 YACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLD 613

Query: 594 SGIKPNEVTFMNILWACSHSGSVEE 618
                + V   N+  A      VEE
Sbjct: 614 PDSPGSYVLISNVFAASGRWKDVEE 638



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 145/261 (55%), Gaps = 4/261 (1%)

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGF 448
           M+  G+  DSF+    L ACG V  +  G +IHG +IK       FV +SL+ MY+KC  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 449 KNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
              A  LF+R+ +++ VV WNS+I  +  NG  +EA+ LF +M    +  +  T + A+Q
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           AC +    + G  +H  ++      D+Y+  AL  M+ + G +  A R+FD + E++ ++
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAM 626
           W++MI  +  +G  N+A   F  + D+ +KP+EV+ ++IL A    G +  GK  +  AM
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 627 RIFGVEPDLQHYACMVDLLSR 647
           + + ++ +L+    ++D+ S+
Sbjct: 241 KNW-LDSNLRIGNTLIDMYSK 260


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/739 (31%), Positives = 393/739 (53%), Gaps = 5/739 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-FMWA 64
           S +NL +L R+HA ++  GL      S +LI+ Y+      SS  VF       + ++W 
Sbjct: 16  SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I+ +  N  F E++  Y K+   + +   + +PSV++AC+ L D   G+ V+ +I+  
Sbjct: 76  SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ D  +  +++  Y   G L  AR+VFD+M  RD+VSW+S+I+ Y  +    E L+++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           H +    + PD  T+ S+  A G L  ++  + +HG  L+  +     + N  + MY K 
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
                A R F +++ R + S+  MI  Y +    ++++  F++ L+ + +P+L+T+ +VL
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVL 314

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C  L  L   K ++  +++ G   E   +   LI+ YA+CG M     V +++  ++ 
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLE-STVRNILIDVYAKCGDMITARDVFNSMECKDT 373

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SWN +IS Y + G   EA++L   M       D  +    +S    +  L+ G  +H +
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433

Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
            IK   C D  V ++LIDMY+KCG    +  +F  +     V WN++I    + G+    
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + +  QM  + +  D  TFL  +  C+++     GK +H  L+ +G   ++ I  AL +M
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCG L+ + RVF+ MS R+VV+W+ MI  YGM+G+   A   F  M  SGI P+ V F
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613

Query: 604 MNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + I++ACSHSG V+EG   F  M+  + ++P ++HYAC+VDLLSRS  I  A + I +MP
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              + SIW ++L  CR    ++  + + + +     +D GY  L SN YA    WD+   
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +R  ++   + K PGYS I
Sbjct: 734 IRKSLKDKHITKNPGYSWI 752



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 283/565 (50%), Gaps = 4/565 (0%)

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT- 157
           P + RA SS  +L    ++H  +I  G D  D     ++  Y  F     +  VF +++ 
Sbjct: 8   PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +++V  W+SII ++  N    E L+ +  +    V PD  T  S+ +AC  L        
Sbjct: 68  AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           ++  +L    + D  +GN+ + MYS+ G L  A + F ++  R   SW ++IS Y+  G+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           +++ALE + ++      P+  T+ +VL +   L  +++G+ +H   + K        +  
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL-KSGVNSVVVVNN 246

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L+  Y +  + ++  +V   +  R+ +S+N +I  Y +  M +E++ + ++       P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 305

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           D  +V+S L ACG++  L L   I+ +++K     +  V++ LID+Y+KCG    A  +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             ++ K  V WNS+I G+ Q+G+ +EA+ LF  M +   + D +T+L  I   + +  L+
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK +H   I  G+  D+ +  AL DMYAKCG++  + ++F SM   + V+W+ +I    
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
             G       +  QM  S + P+  TF+  L  C+   +   GK     +  FG E +LQ
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSM 661
               ++++ S+ G +E + ++   M
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERM 570



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 210/419 (50%), Gaps = 2/419 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P F +   +++   LH   L +G++     +  L+  Y +      +R VFD     DS
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +  +I  Y+     EES+ ++ + + +Q         SVLRAC  L DL   + ++  
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K GF  +  ++  ++  Y + G +  AR VF+ M  +D VSW+SII+ Y  + D+ E 
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +K+F  M+    + D +T L L      L  L+  + +H + ++  I ID  + N+ I M
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG++  + + F  +    T +W  +IS   R G F   L+   +M + +  P++ T 
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  L  CA L   R GK +HC ++R G   E   +G ALIE Y++CG +    +V   + 
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ-IGNALIEMYSKCGCLENSSRVFERMS 571

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            R++++W  +I  Y   G  ++ALE    M+  G++PDS    + + AC + G +  GL
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGL 630



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 208/433 (48%), Gaps = 37/433 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C +LR L+    ++ ++L  G   +      LI+ YA+ G + ++R VF++ +  D
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I  Y+ +    E++ L+  M+  +    +  Y  ++   + L DL  G+ +H 
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK G   D  +  +++  Y + G + D+ K+F  M + D V+W+++I++     D + 
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           GL++   M +  V PD  T L     C  L + R  + IH  +LR   + +  +GN+ I 
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG L ++ R F ++ +R   +WT MI  Y   G  +KALE+F  M +    P+ + 
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            I ++ +C+  G + EG +   ++       +  Y    +IE YA C        V+   
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKM-------KTHYKIDPMIEHYA-C--------VV--- 653

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              ++LS +  IS         +A E +   Q   + PD+   AS L AC   G ++   
Sbjct: 654 ---DLLSRSQKIS---------KAEEFI---QAMPIKPDASIWASVLRACRTSGDMETAE 698

Query: 420 QIHGHVIKIDCKD 432
           ++   +I+++  D
Sbjct: 699 RVSRRIIELNPDD 711


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/646 (34%), Positives = 357/646 (55%), Gaps = 6/646 (0%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +LRAC +   L  G+ +H +++  G   D  +  +++  Y      D A+ VFD M +  
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68

Query: 161 VVS-WSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSI 218
            +S W+ ++A Y  N    E L++F  ++    ++PD  T  S+ +ACG L      + I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  +++  + +D  +G+S + MY KC     A   F ++ ++    W  +ISCY +SG F
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           + ALE F  M     EPN +T+ T + SCA L  L  G  +H ++I  G   +  ++  A
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD-SFISSA 247

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L++ Y +CG +    ++   + ++ +++WN +IS Y  KG     ++L  +M   G+ P 
Sbjct: 248 LVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPT 307

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
             +++S +  C     L  G  +HG+ I+   + D FV SSL+D+Y KCG   LA  +F+
Sbjct: 308 LTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFK 367

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            I +  VV WN MI G+   G   EA+ LF +M  + +E D +TF + + ACS +  LEK
Sbjct: 368 LIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEK 427

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H+ +I   +  +  +  AL DMYAKCG +  A  VF  + +R++VSW++MI  YG 
Sbjct: 428 GKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGS 487

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG    A  LF +ML S +KP+ V F+ IL AC H+G V+EG +YFN M  ++G+ P ++
Sbjct: 488 HGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVE 547

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMP-FPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           HY+C++DLL R+G +  A++++   P    +  +   L + CR+H+ ID+   I + L  
Sbjct: 548 HYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLID 607

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +D+  Y LLSN+YA    WDE   VRS M+  GLKK PG S I
Sbjct: 608 KDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWI 653



 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 170/603 (28%), Positives = 312/603 (51%), Gaps = 12/603 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL R+C N + L +   +H  ++  GL  D      LI  Y        ++ VFD  + 
Sbjct: 7   LPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMEN 66

Query: 58  P-DSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGE 115
           P +  +W  L+  Y  N  + E++ L+ K++        ++ YPSV +AC  L     G+
Sbjct: 67  PCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGK 126

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H  +IK G   D V+ +S++  YG+    + A  +F++M  +DV  W+++I+ Y+ + 
Sbjct: 127 MIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSG 186

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           +  + L+ F  M R G EP+ VT+ +   +C  L  L     IH  ++     +D  + +
Sbjct: 187 NFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY KCG L  A   F ++ K+   +W +MIS Y   G     ++ F +M     +P
Sbjct: 247 ALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKP 306

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
            L TL +++  C+    L EGK VH   IR  + P+  ++  +L++ Y +CGK+   EK+
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDV-FVNSSLMDLYFKCGKVELAEKI 365

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              I +  ++SWN++IS Y  +G   EAL L  +M+   +  D+ +  S L+AC  + +L
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAAL 425

Query: 416 QLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           + G +IH  +I  K+D  +E V  +L+DMY+KCG  + A+ +F+ + ++ +V W SMI  
Sbjct: 426 EKGKEIHNLIIEKKLD-NNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITA 484

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRK 532
           +  +G++  A+ LF +M  + ++ D V FL  + AC + G +++G +  +++I+ YG+  
Sbjct: 485 YGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIP 544

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            +   + L D+  + G L  A  +     E   +V   S +     +H  ++  A + + 
Sbjct: 545 RVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIART 604

Query: 591 MLD 593
           ++D
Sbjct: 605 LID 607



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD    L  ++AC N   L++GK +H K+++ G++ DI++   L + Y  C     A+ V
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60

Query: 557 FDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSG 614
           FD+M     +S W+ ++  Y  +    +A  LF+++L    +KP+  T+ ++  AC    
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
               GK     +   G+  D+   + +V +  +    E A  + + MP
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP 168


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/645 (34%), Positives = 350/645 (54%), Gaps = 3/645 (0%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+ C+    L  G + H +++  G   + ++ T +L  Y   G   DA+ +F ++   
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
               W+ +I  +         L  +  M+  G  PD  T   + +ACG L S+   R +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             +     ++D  +G+S I  YS+ G +  A   F ++  +    W  M++ Y ++G + 
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP-A 338
            A   F++M   +  PN +T   VL  CA    +  G  +H  ++  G+  +       A
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFA 290

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI+ Y +C  +    K+       +I+    +IS Y   GM+  ALE+   +    +  +
Sbjct: 291 LIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRAN 350

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFE 457
           S ++AS L AC  + +L LG ++HGH++K       +V S+++DMY+KCG  +LA+  F 
Sbjct: 351 SVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFI 410

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            I  K  V WNSMI    QNG   EAI+LF QM +   + D V+   A+ AC+N+  L  
Sbjct: 411 GISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHY 470

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  ++    R D++ ++AL DMY+KCG+L  A RVFD+M E+N VSW+++I  YG 
Sbjct: 471 GKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGN 530

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG+L D+ +LF  ML  GI+P+ VTF+ I+ AC H+G V+EG  YF  M    G+   ++
Sbjct: 531 HGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARME 590

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYACMVDL  R+G +  AF MI+SMPF  +  +WG LL  CR+H  +++ +   + L   
Sbjct: 591 HYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDL 650

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              ++GYY LLSN++A  G W+   K+RS+M+  G++KVPG S I
Sbjct: 651 DPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWI 695



 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 193/662 (29%), Positives = 339/662 (51%), Gaps = 43/662 (6%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT+   L++    HA +LV G+ Y+    T+L+  Y   G+   ++ +F   +   
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I+ +     F+ ++L Y KM+        + +P V++AC  L  +  G  VH 
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +I   GF+ D  + +S++  Y E GC+ DAR +FD+M S+D V W+ ++  Y  N D   
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF-- 237
              +F  M R    P+ VT   +   C     +     +HG V+   +++D P+ N+F  
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFAL 291

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I +Y KC D+  A + F +         TAMIS Y  +G    ALE F  +L+ +   N 
Sbjct: 292 IDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL +VL +CAGL  L  GK +H  I++ G G    Y+G A+++ YA+CG++    +   
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSC-YVGSAIMDMYAKCGRLDLAHQTFI 410

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            I +++ + WN +I+  ++ G  +EA++L  QM   G   D  S++++LSAC N+ +L  
Sbjct: 411 GISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHY 470

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH  +++   + D F +S+LIDMYSKCG  +LA  +F+ +++K+ V WNS+I  +  
Sbjct: 471 GKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGN 530

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G   +++NLFH M  + ++ D VTFL  I AC + GQ+++G  +H              
Sbjct: 531 HGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG--IH-------------- 574

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                  Y +C  +     +   M       ++ M+D +G  G+LN+A  +   M     
Sbjct: 575 -------YFRC--MTEELGIMARMEH-----YACMVDLFGRAGRLNEAFGMINSM---PF 617

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGAF 655
            P+   +  +L AC   G+VE  +    +  +F ++P +  +Y  + ++ + +G  E   
Sbjct: 618 SPDAGVWGTLLGACRLHGNVELAE--VASRNLFDLDPQNSGYYVLLSNVHANAGQWESVL 675

Query: 656 KM 657
           K+
Sbjct: 676 KI 677



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 248/498 (49%), Gaps = 10/498 (2%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           + + P  V++L   + C +   L   R  H  +L   I  +G LG   + MY  CG  L 
Sbjct: 43  DSLAPQLVSIL---QTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD 99

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A+  F ++   C+  W  MI  +   G F  AL  + KML     P+  T   V+ +C G
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGG 159

Query: 310 LGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
           L  +  G+ VH +I  + MG E D ++G +LI+FY+E G + +   +   +  ++ + WN
Sbjct: 160 LNSVALGRVVHDKI--QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWN 217

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
           ++++ Y + G    A  + ++M+     P+S + A  LS C +   +  G Q+HG V+  
Sbjct: 218 VMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS 277

Query: 429 DCK-DEFVQSS--LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
             + D  V ++  LID+Y KC    +A  +F++     +V+  +MI G+  NG +  A+ 
Sbjct: 278 GLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALE 337

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           +F  +    +  + VT  + + AC+ +  L  GK +H  ++  G     Y+ +A+ DMYA
Sbjct: 338 IFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYA 397

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG L  A + F  +S+++ V W++MI     +G+  +A  LF+QM  +G K + V+   
Sbjct: 398 KCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISA 457

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
            L AC++  ++  GK     M       DL   + ++D+ S+ G+++ A ++  +M    
Sbjct: 458 ALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EK 516

Query: 666 NGSIWGALLNGCRIHKRI 683
           N   W +++     H R+
Sbjct: 517 NEVSWNSIIAAYGNHGRL 534


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/750 (32%), Positives = 395/750 (52%), Gaps = 12/750 (1%)

Query: 3    LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-- 57
            L ++C +L  L     +HA ++  GL  DP  +T LI  Y + G L S+  VFD   E  
Sbjct: 447  LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 506

Query: 58   ---PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
               PD  +W  +I  Y     FEE +  + +M         +    VL  C+ L    +G
Sbjct: 507  DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAG 566

Query: 115  EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFD 173
             ++HG II+  F+ D  ++T+++  Y       +A  +F K+ +R ++V+W+ +I  + +
Sbjct: 567  RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626

Query: 174  NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
            N    + L+++     E  +    +      AC     L   R +H  V++   + D  +
Sbjct: 627  NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686

Query: 234  GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
              S + MY+K G +  A++ F ++  +      AMIS +  +G    AL  + KM   + 
Sbjct: 687  CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 746

Query: 294  EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
              +  T+ ++L  C+ +G    G++VH ++I++ M      +  AL+  Y +CG   + +
Sbjct: 747  PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNV-AIQSALLTMYYKCGSTEDAD 805

Query: 354  KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
             V + + ER++++W  +I+ + +    K+AL+L   M+  G+  DS  + S +SA   + 
Sbjct: 806  SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 865

Query: 414  SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            +++LG  IHG  IK   + D FV  SL+DMYSK GF   A ++F  +  K++V WNSMI 
Sbjct: 866  NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 925

Query: 473  GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
             +  NG    +INL  Q+  +   +D V+  T + A S++  L KGK +H   I   +  
Sbjct: 926  CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPS 985

Query: 533  DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            D+ ++ AL DMY KCG L+ AQ +F++M  RN+V+W++MI  YG HG   +A  LFK+M 
Sbjct: 986  DLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMK 1045

Query: 593  DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDI 651
             S   P+EVTF+ ++ +CSHSG VEEG   F  MRI +GVEP ++HYA +VDLL R+G +
Sbjct: 1046 RSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRL 1105

Query: 652  EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
            + A+  I  MP  A+ S+W  LL  CR H+ +++ + +   L          Y  L N+Y
Sbjct: 1106 DDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLY 1165

Query: 712  AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             E   WD    +R+ M+  GLKK PG S I
Sbjct: 1166 GEVEMWDRAANLRASMKGRGLKKSPGCSWI 1195



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 188/654 (28%), Positives = 321/654 (49%), Gaps = 15/654 (2%)

Query: 67   IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
            IK  +    + +++ L+ K      T + F +PS+L+ C+SL +L  G  +H  I+  G 
Sbjct: 413  IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 127  DKDDVIQTSILCTYGEFGCLDDARKVFDKM-----TSRDVVSWSSIIASYFDNADVSEGL 181
              D  I TS++  Y + G L  A +VFDKM     ++ D+  W+ +I  YF      EGL
Sbjct: 473  QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 182  KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
              F  M   G+ PD  ++  +   C  L      R IHG+++R   + D  L  + I MY
Sbjct: 533  AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592

Query: 242  SKCGDLLSAERTFVKIEKRCT-TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI-- 298
            S C   + A   F K+E R    +W  MI  +  +G ++K+LE +   L   E   L+  
Sbjct: 593  SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS--LAKNENCKLVSA 650

Query: 299  TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            +      +C+    L  G+ VHC +I+     +  Y+  +L+  YA+ G + + +KV   
Sbjct: 651  SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD-PYVCTSLLTMYAKSGSVEDAKKVFDQ 709

Query: 359  IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
            + ++ +   N +IS +   G + +AL L  +M+      DSF+++S LS C  VGS   G
Sbjct: 710  VLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFG 769

Query: 419  LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
              +H  VIK   +    +QS+L+ MY KCG    A  +F  ++++ VV W SMI GF QN
Sbjct: 770  RTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQN 829

Query: 478  GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
                +A++LF  M    ++ D     + I A   +  +E G  +H   I  G+  D+++ 
Sbjct: 830  RRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVA 889

Query: 538  TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
             +L DMY+K G  ++A+ VF SM  +N+V+W++MI CY  +G    + +L  Q+L  G  
Sbjct: 890  CSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFY 949

Query: 598  PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
             + V+   +L A S   ++ +GK          +  DLQ    ++D+  + G ++ A  +
Sbjct: 950  LDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLI 1009

Query: 658  IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL--SVTGTNDNGYYTLLSN 709
              +MP   N   W +++ G   H   +    + KE+  S T  ++  +  L+++
Sbjct: 1010 FENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITS 1062


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/644 (34%), Positives = 356/644 (55%), Gaps = 8/644 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L  C+++  L    + HG +   G   D  I T ++  YG FG   DAR VFD++   D
Sbjct: 50  LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
              W  ++  Y  N +  E +K++  +++ G   D +      +AC EL  L   + IH 
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            +++     D  +    + MY+KCG++ SA + F  I  R    WT+MI+ Y ++   ++
Sbjct: 167 QLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            L  F +M E     N  T  T++ +C  L  L +GK  H  +++ G+      L  +L+
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS-SCLVTSLL 284

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
           + Y +CG +S   +V +     +++ W  +I  Y   G   EAL L  +M+   + P+  
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           ++AS LS CG + +L+LG  +HG  IK+   D  V ++L+ MY+KC     A  +FE   
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMES 404

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           +K +V WNS+I GF QNG+  EA+ LFH+M    +  + VT  +   AC+++G L  G  
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464

Query: 521 VHHKLISYG--VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           +H   +  G      +++ TAL D YAKCGD Q+A+ +FD++ E+N ++WSAMI  YG  
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQH 637
           G    +  LF++ML    KPNE TF +IL AC H+G V EGK YF++M + +   P  +H
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           Y CMVD+L+R+G++E A  +I  MP   +   +GA L+GC +H R D+ + + K++    
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +D  YY L+SN+YA +G W++  +VR++M+  GL K+ G+ST+
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688



 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 191/607 (31%), Positives = 329/607 (54%), Gaps = 12/607 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   CTN+  L + H  L   GL  D   +T+L+  Y   G  + +RLVFD   EPD ++
Sbjct: 50  LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W V+++CY  N    E + LY  +++      + ++   L+AC+ L DL +G+K+H +++
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K     D+V+ T +L  Y + G +  A KVF+ +T R+VV W+S+IA Y  N    EGL 
Sbjct: 170 KVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F+ M    V  +  T  +L  AC +L +L   +  HG +++  I++   L  S + MY 
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGD+ +A R F +        WTAMI  Y  +G   +AL  F KM  V+ +PN +T+ +
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGE 361
           VL  C  +  L  G+SVH   I+ G+   +D  +  AL+  YA+C +  + + V     E
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGI---WDTNVANALVHMYAKCYQNRDAKYVFEMESE 405

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++I++WN +IS +++ G   EAL L  +M +  + P+  +VAS  SAC ++GSL +G  +
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465

Query: 422 HGHVIKID---CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           H + +K+         V ++L+D Y+KCG    A L+F+ I++K+ + W++MI G+ + G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
           +++ ++ LF +M     + +E TF + + AC + G + +G K+       Y         
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
           T + DM A+ G+L+ A  + + M  + +V  + A +   GMH + +    + K+MLD  +
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--L 643

Query: 597 KPNEVTF 603
            P++ ++
Sbjct: 644 HPDDASY 650


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/776 (30%), Positives = 389/776 (50%), Gaps = 38/776 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F+ C+N R L      HAH++++G       +  LI+ Y +  +L  +  VF+   + D
Sbjct: 30  IFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRD 89

Query: 60  SFMWAV--------------------------------LIKCYMWNNFFEESILLYHKMI 87
              W                                  LI  Y+ N   ++SI ++ KM 
Sbjct: 90  IVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMR 149

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
                  +      L+ CS L D   G ++HG  ++ GFD D V  ++++  Y +   L+
Sbjct: 150 DLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLE 209

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           D+  VF ++  ++ +SWS+ IA    N  +  GLK+F  M R+G+     T  S+  +C 
Sbjct: 210 DSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCA 269

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            L + R    +H H L+     D  +G + + MY+KC ++  A + F  +      S+ A
Sbjct: 270 GLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNA 329

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  Y R+    +A + F+++ +     + ++L   L + A +    EG  +H   I+  
Sbjct: 330 MIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSN 389

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +      +  A+++ Y +CG + E   +   +  R+ +SWN +I+   +     + L   
Sbjct: 390 LSSNI-CVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHF 448

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKC 446
             M    + PD F+  S L AC    +   G+++HG +IK     + FV S+L+DMYSKC
Sbjct: 449 GAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKC 508

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G    A  +  R++++++V WN++I GF     S ++   F  M    +E D  T+ T +
Sbjct: 509 GMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVL 568

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
             C+N+  +  GK +H ++I   +  D+YI + L DMY+KCG++  +  +F    +R+ V
Sbjct: 569 DTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSV 628

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           +W+AMI  +  HG   +A  LF+ ML   IKPN  TF+++L ACSH G+ ++G FYF  M
Sbjct: 629 TWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKM 688

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
             I+ +EP L+HY+CMVD+L RSG +E A ++I  MPF A+  IW  LL+ C+I   ++V
Sbjct: 689 ASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEV 748

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +     L      D+  YTLLSNIYA+ G W +  K+R  M    LKK PG S I
Sbjct: 749 AEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWI 804



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/616 (26%), Positives = 294/616 (47%), Gaps = 35/616 (5%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  + + CS+   L  G++ H  +I  GF     +   ++  Y +   L+ A KVF++M 
Sbjct: 27  FSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMP 86

Query: 158 SR--------------------------------DVVSWSSIIASYFDNADVSEGLKMFH 185
            R                                DVVSW+S+I+ Y  N D+ + + +F 
Sbjct: 87  QRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFL 146

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   GV  D  T+    + C  L        IHG  ++     D   G++ + MY+KC 
Sbjct: 147 KMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCN 206

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L  +   F ++  +   SW+A I+   ++    + L+ F +M       +  T  +V  
Sbjct: 207 SLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFR 266

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           SCAGL   R G  +HC  ++   G +   +G A ++ YA+C  MS+  K+   + + N+ 
Sbjct: 267 SCAGLSASRLGTQLHCHALKTDFGSDV-IVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           S+N +I  YAR     +A +L +Q+Q      D  S++ +LSA   +     GLQ+HG  
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385

Query: 426 IKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           IK +      V ++++DMY KCG    A  LF+ ++ +  V WN++I    QN +  + +
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
           + F  M  + +E DE T+ + ++AC+       G  VH ++I  G+   +++ +AL DMY
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMY 505

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           +KCG ++ A+++   + E+ +VSW+A+I  + +  +  D+   F  ML+ G++P+  T+ 
Sbjct: 506 SKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYA 565

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            +L  C++  +V  GK     M    +  D+   + +VD+ S+ G++  +  M    P  
Sbjct: 566 TVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-K 624

Query: 665 ANGSIWGALLNGCRIH 680
            +   W A++ G   H
Sbjct: 625 RDSVTWNAMICGFAYH 640



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TF    Q CSN   L+ GK  H  +I  G    +++   L  MY KC  L+ A +VF+ M
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 561 SERNVVSWSAMI-DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
            +R++VSW+ M+  C G  G++  A ++F  M   G   + V++ +++     +G +++ 
Sbjct: 86  PQRDIVSWNTMVFGCAGA-GRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDIQKS 141

Query: 620 KFYFNAMRIFGVEPD 634
              F  MR  GV  D
Sbjct: 142 IAVFLKMRDLGVMFD 156


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/650 (34%), Positives = 353/650 (54%), Gaps = 16/650 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKM 156
           + +++R C +      GE V   ++        V +  ++L  +  FG + +A  VF +M
Sbjct: 36  FVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRM 95

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             RD+ SW+ ++  Y       E L ++H ++  G+ PD  T  S+  +C     L   R
Sbjct: 96  GERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGR 155

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            +H HV+R    +D  + N+ I MY KCGD++SA   F K+  R   SW AMIS Y  + 
Sbjct: 156 EVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFEND 215

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
              + LE F +M E+  +P+L+T+ +V+ +C  LG  R G  +H  ++R           
Sbjct: 216 ECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYN 275

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +LI+ Y   G   E E V   +  R+++SW  +IS      +  +ALE    M+  G M
Sbjct: 276 -SLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTM 334

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIH------GHVIKIDCKDEFVQSSLIDMYSKCGFKN 450
           PD  ++AS LSAC ++G L +G+++H      GH++ +      V +SLIDMYSKC    
Sbjct: 335 PDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYV-----VVANSLIDMYSKCKRIE 389

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F +I  K V+ W S+I G   N    EA+  F +M L   + + VT ++A+ AC+
Sbjct: 390 KALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACA 448

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G L  GK +H   +  G+  D ++  A+ D+Y +CG ++TA   F+ ++E++V +W+ 
Sbjct: 449 RVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNI 507

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-F 629
           ++  Y   G+      LFK+M++S I P++VTF+++L ACS SG V EG  YF  M++ +
Sbjct: 508 LLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNY 567

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            + P+L+HYAC+VDLL R+G +  A + I  MP   + +IWGALLN CRIH+ + + +  
Sbjct: 568 HITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELA 627

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            + +        GYY LL N+YA+ G WDE  KVR  M+  GL   PG S
Sbjct: 628 AQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCS 677



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 170/568 (29%), Positives = 294/568 (51%), Gaps = 12/568 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  +   G + ++  VF    E D F W VL+  Y    FF+E++ LYH+++       
Sbjct: 75  LLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPD 134

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            + +PSVLR+C+   DL  G +VH  +++  FD D  +  +++  Y + G +  AR +FD
Sbjct: 135 VYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFD 194

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KM +RD +SW+++I+ YF+N +  EGL++F  M    ++PD +TM S+  AC  L   R 
Sbjct: 195 KMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERL 254

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              +H +V+R     +  + NS I MY   G    AE  F  +E R   SWT +IS    
Sbjct: 255 GTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVD 314

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +    KALE++  M      P+ +T+ +VL +CA LG L  G  +H    R G    Y  
Sbjct: 315 NLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH-ILYVV 373

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +LI+ Y++C ++ +  ++ H I +++++SW  +I+         EAL    +M    
Sbjct: 374 VANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKM-ILK 432

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
             P+S ++ S+LSAC  VG+L  G +IH H +K     D F+ ++++D+Y +CG    A 
Sbjct: 433 SKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTAL 492

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
             F  + +K V  WN ++ G+ Q G     + LF +M  + +  D+VTF++ + ACS  G
Sbjct: 493 NQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSG 551

Query: 514 QLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAM 571
            + +G ++     ++Y +  ++     + D+  + G L  A    + M  + +   W A+
Sbjct: 552 MVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGAL 611

Query: 572 IDCYGMH-----GQLNDAASLFKQMLDS 594
           ++   +H     G+L  A  +FKQ  +S
Sbjct: 612 LNACRIHRHVLLGELA-AQHIFKQDAES 638



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 237/477 (49%), Gaps = 13/477 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC     L R   +HAH++      D      LI  Y + G + S+R++FD     D
Sbjct: 141 VLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRD 200

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVH 118
              W  +I  Y  N+   E + L+ +M RE +   + +   SV+ AC  LGD   G ++H
Sbjct: 201 RISWNAMISGYFENDECLEGLELFFRM-RELSIDPDLMTMTSVISACELLGDERLGTQLH 259

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +++  +D +  +  S++  Y   G   +A  VF  M  RDVVSW++II+   DN    
Sbjct: 260 SYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPD 319

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L+ + +M   G  PD VT+ S+  AC  L  L     +H    R    +   + NS I
Sbjct: 320 KALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLI 379

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKC  +  A   F +I  +   SWT++I+    +    +AL  F KM+ +K +PN +
Sbjct: 380 DMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI-LKSKPNSV 438

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TLI+ L +CA +G L  GK +H   ++ GMG +  +L  A+++ Y  CG+M       + 
Sbjct: 439 TLISALSACARVGALMCGKEIHAHALKAGMGFD-GFLPNAILDLYVRCGRMRTALNQFN- 496

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E+++ +WN+L++ YA+KG     +EL  +M    + PD  +  S L AC   G +  G
Sbjct: 497 LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEG 556

Query: 419 LQIHGHVIKID---CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI 471
           L+ +   +K++     +    + ++D+  + G  N A+   ER+  K    +W +++
Sbjct: 557 LE-YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 2/210 (0%)

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           NS +     +GN  +A+     M    + ++E  F+  I+ C N     +G++V   ++S
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 528 YGVR-KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
             V    + +  AL  M+ + GD+  A  VF  M ER++ SW+ ++  Y   G  ++A  
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
           L+ ++L +GI+P+  TF ++L +C+ +  +  G+     +  F  + D+     ++ +  
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYV 181

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           + GD+  A  +   MP     S W A+++G
Sbjct: 182 KCGDVVSARMLFDKMPTRDRIS-WNAMISG 210


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/662 (33%), Positives = 370/662 (55%), Gaps = 7/662 (1%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +  M+  +     F +PS+L+AC+SL  L  G  +H +++  GF  D  I +S++  Y +
Sbjct: 34  FSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAK 93

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FG L  ARKVF++M  RDVV W+++I  Y     V E   + + M  +G++P  VT+L +
Sbjct: 94  FGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEM 153

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
                E+  L+    +H   +      D  + NS + +Y KC  +  A+  F ++E+R  
Sbjct: 154 LSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW  MIS Y   G   + L+   +M      P+  T    L     +  L  G+ +HCQ
Sbjct: 211 VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I++ G   +  +L  ALI  Y +CGK     +V+  I  ++++ W ++IS   R G +++
Sbjct: 271 IVKTGFDVDM-HLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEK 329

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
           AL +  +M   G    S ++AS +++C  +GS  LG  +HG+V++     D    +SLI 
Sbjct: 330 ALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLIT 389

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE-MDEV 500
           MY+KCG  + + ++FER+ ++ +V WN++I G+ QN +  +A+ LF +M    ++ +D  
Sbjct: 390 MYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSF 449

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T ++ +QACS+ G L  GK +H  +I   +R    +DTAL DMY+KCG L+ AQR FDS+
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           S ++VVSW  +I  YG HG+ + A  ++ + L SG++PN V F+ +L +CSH+G V++G 
Sbjct: 510 SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGL 569

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
             F++M R FGVEP+ +H AC+VDLL R+  IE AFK         +  + G +L+ CR 
Sbjct: 570 KIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRA 629

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + + +V   I +++      D G+Y  L + +A    WD+  +  + M   GLKK+PG+S
Sbjct: 630 NGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689

Query: 740 TI 741
            I
Sbjct: 690 KI 691



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 167/561 (29%), Positives = 288/561 (51%), Gaps = 10/561 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C +L++L+    +H  +LV G   D   S+ L+  YA+ G L  +R VF+  +E D
Sbjct: 52  LLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERD 111

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I CY       E+  L ++M R Q      +  ++L   S + ++   + +H 
Sbjct: 112 VVHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKPGPV--TLLEMLSGVLEITQLQCLHD 168

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +  GFD D  +  S+L  Y +   + DA+ +FD+M  RD+VSW+++I+ Y    ++SE
Sbjct: 169 FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSE 228

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+ + M  +G+ PD  T  +     G +C L   R +H  +++    +D  L  + I 
Sbjct: 229 ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG   ++ R    I  +    WT MIS   R G  +KAL  F +ML+   + +   
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +V+ SCA LG    G SVH  ++R G   +   L  +LI  YA+CG + +   +   +
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN-SLITMYAKCGHLDKSLVIFERM 407

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP-DSFSVASSLSACGNVGSLQLG 418
            ER+++SWN +IS YA+     +AL L  +M+   +   DSF+V S L AC + G+L +G
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467

Query: 419 LQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             IH  VI+   +    V ++L+DMYSKCG+   A   F+ I  K VV W  +I G+  +
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
           G    A+ ++ +   + +E + V FL  + +CS+ G +++G  +   ++  +GV  +   
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587

Query: 537 DTALTDMYAKCGDLQTAQRVF 557
              + D+  +   ++ A + +
Sbjct: 588 LACVVDLLCRAKRIEDAFKFY 608



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/541 (29%), Positives = 275/541 (50%), Gaps = 9/541 (1%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           ++S I     + D  + L  F SM+   + PD  T  SL +AC  L  L    SIH  VL
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
                 D  + +S + +Y+K G L  A + F ++ +R    WTAMI CY+R+G   +A  
Sbjct: 74  VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
              +M     +P  +TL+ +L   +G+  + + + +H   +  G   +   +  +++  Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMN-SMLNLY 189

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            +C  + + + +   + +R+++SWN +IS YA  G   E L+LL +M+  GL PD  +  
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           +SLS  G +  L++G  +H  ++K     D  ++++LI MY KCG +  +Y + E I  K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            VV W  MI G  + G + +A+ +F +M  +  ++      + + +C+ +G  + G  VH
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             ++ +G   D     +L  MYAKCG L  +  +F+ M+ER++VSW+A+I  Y  +  L 
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429

Query: 583 DAASLFKQMLDSGIKP-NEVTFMNILWACSHSGSVEEGKF-YFNAMRIFGVEPDLQHYAC 640
            A  LF++M    ++  +  T +++L ACS +G++  GK  +   +R F + P       
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTA 488

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           +VD+ S+ G +E A +   S+ +    S WG L+ G   H + D+   I  E   +G   
Sbjct: 489 LVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALEIYSEFLHSGMEP 547

Query: 701 N 701
           N
Sbjct: 548 N 548



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 209/415 (50%), Gaps = 4/415 (0%)

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
           T  + + I+  +  G  ++ L +F  ML  K  P+  T  ++L +CA L  L  G S+H 
Sbjct: 11  TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           Q++  G   ++ Y+  +L+  YA+ G ++   KV   + ER+++ W  +I  Y+R G+  
Sbjct: 71  QVLVNGFSSDF-YISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLID 441
           EA  L+ +M+  G+ P   ++   LS    +  LQ  L     +   DC D  V +S+++
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC-LHDFAVIYGFDC-DIAVMNSMLN 187

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +Y KC     A  LF++++Q+ +V WN+MI G+   GN  E + L ++M  + L  D+ T
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           F  ++     +  LE G+ +H +++  G   D+++ TAL  MY KCG  + + RV +++ 
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
            ++VV W+ MI      G+   A  +F +ML SG   +     +++ +C+  GS + G  
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
               +   G   D      ++ + ++ G ++ +  +   M    +   W A+++G
Sbjct: 368 VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/711 (30%), Positives = 375/711 (52%), Gaps = 13/711 (1%)

Query: 10  LRKLTRLHAHLLVTGL--HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           L +  ++HA ++ + L  H D       I  Y + G L  +   F   K  D   W V+I
Sbjct: 229 LEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMI 288

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y  +  F  S+ L+ +M+ E    ++  + S+L  C +   L  G ++H  +++   +
Sbjct: 289 GAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLE 348

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII-ASYFDNADVSEGLKMFHS 186
              V+  S+L  Y      +D+R +FD+M+ RD VSWS+II A   +++   + L ++ S
Sbjct: 349 SHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRS 408

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+ EGV P  + +  + EACG L  L+  + +H HV+   ++ D  +G S + MY+KCG 
Sbjct: 409 MLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKCGT 467

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +  A + F +I  R    W +MI+ Y       +AL  F +M      P+ IT +TVL +
Sbjct: 468 VGEARKVFDRINNRSRILWNSMITAYQEKDP-HEALHLFREMQPEGVSPDRITFMTVLNA 526

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C     L  G+++H +I+  G   +   +  AL   YA+CG + E   V  ++  R+++S
Sbjct: 527 CVNAADLENGRTIHTRIVDSGFAADV-RVATALFNMYAKCGSLGEARGVFDSMVFRDVVS 585

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +I+ Y +    + A+ L   MQ  G+ PD  +  S L+AC +   L  G QIH  + 
Sbjct: 586 WNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIA 645

Query: 427 KIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERI------QQKSVVMWNSMICGFYQNGN 479
           +   +++ V  + LI MY+ CG  N A  +F+ I        + + +W SMI  + Q+G 
Sbjct: 646 ESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGE 705

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             +A+ L+ QM+   +E D VTF++ + AC+++  L +G+ +H +++  G+  D+ +  +
Sbjct: 706 YRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANS 765

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           +  MY KCG    A  VF+    +++  W+A+I  Y  HG    A  +F+++   GI+ +
Sbjct: 766 IVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELS 825

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
            +TF+ +L ACSH G +EEG  +F +M   G+EP+++H++C+VDLL+R+G +  A + + 
Sbjct: 826 NLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLS 885

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
            MP  AN  +  ALL  CR+H  ++  + + ++L          Y  LSNI
Sbjct: 886 RMPVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936



 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 199/659 (30%), Positives = 335/659 (50%), Gaps = 9/659 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +CT L  L     +   L  T L  D       I  Y + G L  +   F   K  D
Sbjct: 16  LLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRD 75

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W V+I  Y  +  F  S+ L+ +M+ E    ++  + S+L  C +   L  G ++H 
Sbjct: 76  VVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHA 135

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDAR-KVFDKMTSRDVVSWSSIIASYFDNADVS 178
            +++   +   V+  S+L  Y      +D+R + F +M  RDVVSW+ +I +Y  +   S
Sbjct: 136 LVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFS 195

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK--IDGPLGNS 236
             +++F  M+ EG  P+ VT +S+   C     L   R IH  V+   ++  +D  + N 
Sbjct: 196 LSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNL 255

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY KCG L  A +TF ++++R   SWT MI  Y++ G F  +L+ F +ML     PN
Sbjct: 256 TINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPN 315

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T +++L  C     L +G+ +H  ++   +   +  +  +L+  Y+ C    +   + 
Sbjct: 316 SVTFVSILSGCEAPSLLEQGRQIHALVVESSL-ESHVVVANSLLGMYSRCRSWEDSRSLF 374

Query: 357 HAIGERNILSWNMLISEYARK-GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
             +  R+ +SW+ +I   +R+    ++AL L   M   G+MP + +++  L ACG++  L
Sbjct: 375 DRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAEL 434

Query: 416 QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           + G  +H HVI+   + + V  SL++MY+KCG    A  +F+RI  +S ++WNSMI   Y
Sbjct: 435 KGGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITA-Y 493

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           Q  +  EA++LF +M    +  D +TF+T + AC N   LE G+ +H +++  G   D+ 
Sbjct: 494 QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVR 553

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + TAL +MYAKCG L  A+ VFDSM  R+VVSW+ MI  Y        A SL   M   G
Sbjct: 554 VATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEG 613

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           ++P++ TF ++L ACS    + +G+   + +    +E D+     ++ + +  G +  A
Sbjct: 614 MRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNA 672



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 292/568 (51%), Gaps = 6/568 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           ++L AC+ LG L  G+ +  R+     + D  ++   +  Y + GCLD A + F +M  R
Sbjct: 15  TLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRR 74

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           DVVSW+ +I +Y  +   S  L++F  M+ EG  P+ VT +S+   C     L   R IH
Sbjct: 75  DVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIH 134

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE-RTFVKIEKRCTTSWTAMISCYNRSGWF 278
             V+   ++    + NS + MYS+C     +  +TF ++++R   SWT MI  Y++ G F
Sbjct: 135 ALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKF 194

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
             +++ F +ML     PN +T +++L  C     L +G+ +H  ++   +    D     
Sbjct: 195 SLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLN 254

Query: 339 L-IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           L I  Y +CG +    +    +  R+++SW ++I  Y++ G    +L+L  +M   G  P
Sbjct: 255 LTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAP 314

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLF 456
           +S +  S LS C     L+ G QIH  V++   +    V +SL+ MYS+C     +  LF
Sbjct: 315 NSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLF 374

Query: 457 ERIQQKSVVMWNSMICG-FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           +R+  +  V W+++I     ++ +  +A+ L+  M    +    +     ++AC ++ +L
Sbjct: 375 DRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAEL 434

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + GK VH  +I  G+  D+ +  +L +MYAKCG +  A++VFD ++ R+ + W++MI  Y
Sbjct: 435 KGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAY 493

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
                 ++A  LF++M   G+ P+ +TFM +L AC ++  +E G+     +   G   D+
Sbjct: 494 -QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADV 552

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           +    + ++ ++ G +  A  +  SM F
Sbjct: 553 RVATALFNMYAKCGSLGEARGVFDSMVF 580



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 240/476 (50%), Gaps = 7/476 (1%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M R G+ PD V + +L  AC +L +L   + I   +   ++++D  + N  I MY KCG 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  A +TF ++++R   SWT MI  Y++ G F  +L+ F +ML     PN +T +++L  
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE-KVIHAIGERNIL 365
           C     L +G+ +H  ++   +   +  +  +L+  Y+ C    +   +    +  R+++
Sbjct: 121 CEAPSLLEQGRQIHALVVESSL-ESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVV 179

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SW ++I  Y++ G    +++L  +M   G  P+S +  S LS C     L+ G QIH  V
Sbjct: 180 SWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALV 239

Query: 426 IKIDCKDEF---VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           ++   +      V +  I+MY KCG  + A   F R++++ VV W  MI  + Q+G    
Sbjct: 240 VESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSL 299

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           ++ LF +M L     + VTF++ +  C     LE+G+ +H  ++   +   + +  +L  
Sbjct: 300 SLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLG 359

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMI-DCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           MY++C   + ++ +FD MS R+ VSWS +I  C        DA  L++ ML  G+ P  +
Sbjct: 360 MYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTL 419

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
               +L AC     ++ GK     +   G+E DL   + +V++ ++ G +  A K+
Sbjct: 420 ALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGIS-LVNMYAKCGTVGEARKV 474



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 92/189 (48%), Gaps = 3/189 (1%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++LR+   +HA ++  GL  D   +  ++  Y + GS   + +VF+  K  D  +W  LI
Sbjct: 739 SDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALI 798

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y  +   E+++ ++ ++ ++   +SN  + ++L ACS +G +  G +    + + G +
Sbjct: 799 ASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIE 858

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
            +    + ++      G L  A +   +M  + + +  ++++A+   + DV    ++   
Sbjct: 859 PNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEK 918

Query: 187 MVREGVEPD 195
           +  E ++P+
Sbjct: 919 L--EALDPE 925


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 234/685 (34%), Positives = 377/685 (55%), Gaps = 10/685 (1%)

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIY-PSVLRACSSLGDLGSGEKVHGRIIKC 124
           +I+ Y  + FF+++I +Y KM+ +   +  F Y P +++A   L D+  G ++HG ++K 
Sbjct: 79  VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G   D  +  S+L  Y + G ++DA ++F+KM   D+VSW+++I+ +  + D +  L  F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198

Query: 185 HSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
            SMV E G+ P+ V  +S   +C  L SL   R IHG V++  + ++  L +S I MY K
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMK 258

Query: 244 CGDLLSAERTFVKI-----EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
           CG + +AE  F  I      +R    W  MIS Y  +G F +AL  F+KM+    +P+  
Sbjct: 259 CGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYS 318

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++++   C+    +  GK +H  I + G+      +  AL++ Y +CG M    K+   
Sbjct: 319 TMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIR-VETALLDMYLKCGDMGTGLKIFRR 377

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
               N++ W+ +IS  A+ G   +ALEL  + +    + DS  + + L AC ++     G
Sbjct: 378 SQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEG 437

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           +QIHG   K+    D FV S+L+D+Y+KC     +  +F R+ QK +V WN++I G+ Q+
Sbjct: 438 MQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQD 497

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
             + EA+  F  M L  +  + VT    +  C+++  +   K VH  LI  G+   + + 
Sbjct: 498 ECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVS 557

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L   YAKCGD+ ++   F+ M ERN VSW+++I   GMH + ++   LF +M+ SGIK
Sbjct: 558 NSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIK 617

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           P+ VTF  IL ACSH+G V+EG  YF +M   F ++P L+ Y CMVDLL R+G +  A+ 
Sbjct: 618 PDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYD 677

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           +I +MP   +  IWG+LL  C+ H    + + +   +     +  GY  LL+N+Y   G 
Sbjct: 678 LIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGK 737

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
             E  KVRS ++  GLKK PG S I
Sbjct: 738 GREGSKVRSEIKDMGLKKKPGCSWI 762



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 159/568 (27%), Positives = 292/568 (51%), Gaps = 15/568 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    ++ K  ++H H+L  G+  D      L+  Y + G +  +  +F+   E D   W
Sbjct: 119 FGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSW 178

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIY-PSVLRACSSLGDLGSGEKVHGRII 122
             +I  +  +  +  S++ +  M+ E     N +   S + +CSSL  L  G ++HG ++
Sbjct: 179 NTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVV 238

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD-----VVSWSSIIASYFDNADV 177
           K G D ++ + +S++  Y + G + +A  +F+ +  +D      V W+ +I+ Y  N   
Sbjct: 239 KSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCF 298

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           S+ L +F  M+  G++PD+ TM+SL   C E   +   + IHG + +  +K +  +  + 
Sbjct: 299 SQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETAL 358

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCGD+ +  + F + +      W+A+IS   +SG   KALE F    E K E  L
Sbjct: 359 LDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELF---YEFKMEDGL 415

Query: 298 I---TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
                L+ VL +C+ L    EG  +H    + G   +  ++G AL++ YA+C  M   +K
Sbjct: 416 ADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDV-FVGSALVDLYAKCRDMGYSKK 474

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V   + +++++SWN LIS YA+   + EAL+    MQ   + P++ ++A  LS C ++  
Sbjct: 475 VFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSV 534

Query: 415 LQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           + L  ++HG++I+        V +SLI  Y+KCG  N +   FE++ +++ V WNS+I G
Sbjct: 535 MTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILG 594

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRK 532
              +  + E I LF +M  + ++ D VTF   + ACS+ G++++G K+    +  + ++ 
Sbjct: 595 MGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKP 654

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            +   T + D+  + G L  A  +  +M
Sbjct: 655 QLEQYTCMVDLLGRAGHLNQAYDLIMAM 682



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 196/433 (45%), Gaps = 34/433 (7%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +   GL  +    T L++ Y + G + +   +F   +  +  MW+ +I     + 
Sbjct: 338 QIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSG 397

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              +++ L+++   E     + I  +VLRACSSL     G ++HG   K GF  D  + +
Sbjct: 398 CPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGS 457

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y +   +  ++KVF +++ +D+VSW+++I+ Y  +    E LK F  M  E + P
Sbjct: 458 ALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRP 517

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + VT+  +   C  L  +   + +HG+++R+ +     + NS I  Y+KCGD+ S+  TF
Sbjct: 518 NTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTF 577

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            K+ +R   SW ++I          + +  F KM+    +P+ +T   +L +C+  G + 
Sbjct: 578 EKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVD 637

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           EG    C+   K M  +++ L P L ++                           ++   
Sbjct: 638 EG----CKYF-KSMVEDFN-LKPQLEQY-------------------------TCMVDLL 666

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            R G   +A +L++ M      PD     S L +C N G   L   +  H+ K+      
Sbjct: 667 GRAGHLNQAYDLIMAMPC---TPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVG 723

Query: 435 VQSSLIDMYSKCG 447
            +  L ++Y   G
Sbjct: 724 YRVLLANLYENLG 736


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/669 (34%), Positives = 369/669 (55%), Gaps = 15/669 (2%)

Query: 81  LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY 140
            L  +        + +IY S+L++C   GD  +G+ +H  IIK G   D      +L  Y
Sbjct: 30  FLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY 89

Query: 141 GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FV 197
            ++  L DA K+FD+M  R+ VS+ ++I  Y      SE + +F  +  EG E +   F 
Sbjct: 90  VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFS 149

Query: 198 TMLSLAEACGELCSLRPAR---SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           T+L L      L S   A+   S+H  V +     D  +G + I  YS CG    A + F
Sbjct: 150 TVLKL------LVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVF 203

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             IE +   SWT M++CY  +  F+++L+ F +M  V  +PN  T  +VL +C GL    
Sbjct: 204 DAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFN 263

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK+VH    +     E  ++G  LI+ Y + G + +  +V   + + +++ W+ +I+ Y
Sbjct: 264 VGKAVHGCAFKTSYLEEL-FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARY 322

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
           A+   S+EA+E+  +M+   ++P+ F++AS L AC ++  LQLG QIH HV+K+    + 
Sbjct: 323 AQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNV 382

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           FV ++L+DMY+KCG    +  LF      + V WN++I G+ Q GN  +A+ LF  M   
Sbjct: 383 FVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLEC 442

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            ++  EVT+ + ++AC+ I  LE G  +H   +     K+  +  AL DMYAKCG+++ A
Sbjct: 443 QVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA 502

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           + VFD + E + VSW+AMI  Y +HG   +A   F+ ML++  KP++VTF+ IL ACS++
Sbjct: 503 RLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNA 562

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G ++ G+ YF +M   + +EP  +HY CMV LL RSG ++ A K++H +PF  +  +W A
Sbjct: 563 GLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRA 622

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL+ C IH  +++ +   + +      D   + LLSNIYA    W     +R+ M+  G+
Sbjct: 623 LLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGI 682

Query: 733 KKVPGYSTI 741
           +K PG S I
Sbjct: 683 RKEPGLSWI 691



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 177/625 (28%), Positives = 301/625 (48%), Gaps = 47/625 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH  ++  G   D  A+  L+  Y +  SL  +  +FD   + ++  +  LI+ Y     
Sbjct: 66  LHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLR 125

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F E+I L+ ++  E   ++ F++ +VL+   S      G  VH  + K GFD D  + T+
Sbjct: 126 FSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTA 185

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y   G  + AR+VFD +  +D+VSW+ ++A Y +N    E LK+F  M   G +P+
Sbjct: 186 LIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPN 245

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+ +AC  L      +++HG   +     +  +G   I +Y K GD+  A + F 
Sbjct: 246 NFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFE 305

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++ K     W+ MI+ Y +S   ++A+E F +M      PN  TL ++L +CA L  L+ 
Sbjct: 306 EMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQL 365

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  +HC +++ G+     ++  AL++ YA+CG+M    ++         +SWN +I  Y 
Sbjct: 366 GNQIHCHVVKVGLDMNV-FVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYV 424

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEF 434
           + G  ++AL L   M    +     + +S L AC  + +L+ G QIH   +K I  K+  
Sbjct: 425 QAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTV 484

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V ++LIDMY+KCG    A L+F+ +++   V WN+MI G+  +G   EA+  F  M    
Sbjct: 485 VGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETE 544

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
            + D+VTF+  + ACSN G L++G                                   Q
Sbjct: 545 CKPDKVTFVGILSACSNAGLLDRG-----------------------------------Q 569

Query: 555 RVFDSMSERNVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
             F SM E   +      ++ M+   G  G L+ AA L  ++     +P+ + +  +L A
Sbjct: 570 AYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEI---PFEPSVMVWRALLSA 626

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPD 634
           C     VE G+   +A R+  +EP+
Sbjct: 627 CVIHNDVELGR--ISAQRVLEIEPE 649



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C +L  L    ++H H++  GL  +   S  L++ YA+ G + +S  +F       
Sbjct: 353 LLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCT 412

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+     E++++L+  M+  Q   +   Y SVLRAC+ +  L  G ++H 
Sbjct: 413 DVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHS 472

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K  +DK+ V+  +++  Y + G + DAR VFD +   D VSW+++I+ Y  +    E
Sbjct: 473 LSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGE 532

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            LK F SM+    +PD VT + +  AC
Sbjct: 533 ALKTFESMLETECKPDKVTFVGILSAC 559



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 88/184 (47%), Gaps = 7/184 (3%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  +  L   +++H+  + T    +      LI+ YA+ G+++ +RLVFD  +E D
Sbjct: 454 VLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHD 513

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +  + E++  +  M+  +       +  +L ACS+ G L  G+    
Sbjct: 514 QVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFK 573

Query: 120 RIIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNAD 176
            +++  +D +   +  T ++   G  G LD A K+  ++     V+ W +++++   + D
Sbjct: 574 SMVE-EYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHND 632

Query: 177 VSEG 180
           V  G
Sbjct: 633 VELG 636


>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/628 (34%), Positives = 355/628 (56%), Gaps = 9/628 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++   + K GF++   + T+ L  YG+ GC+  A+ +F++M  RDVVSW+++I  Y  N 
Sbjct: 74  QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              + L++F  M+REG  P   T++ L  +CG    +   ++IHG  ++  + +D  + N
Sbjct: 134 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 193

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           +   MY+KC DL +AE  F +I ++   SW  MI  Y ++G F +A+  F +M + + E 
Sbjct: 194 ALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEV 253

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N +T+I++L + A L       S HC +I+ G   +   +  +L+  YA CG +     +
Sbjct: 254 NYVTIISLLSANAHL------DSTHCYVIKTGFATDASVI-TSLVCSYAGCGNIESAGLL 306

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            + + +RN++S   +IS YA KG     +E   QM    + PD+ ++ S L    +   +
Sbjct: 307 YNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFI 366

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             GL IH + +K   C D  V + LI MYSK G     + LF  + +K ++ WNS+I   
Sbjct: 367 GSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISAC 426

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            Q G + +A+ LF QM +     D +T  + +  CS +G L+ G+ +H+ ++   +  + 
Sbjct: 427 IQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMED 486

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           +++TAL DMY KCG L++A+RVF S+ E  + +W+ MI  YG+ G  + A S + +M + 
Sbjct: 487 FLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQ 546

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEG 653
           G+KP+ +TF+ +L AC+H G V EGK YF +MR  FG+ P LQH ACMVDLLSR+G +E 
Sbjct: 547 GLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEE 606

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A   + +M    + +IWGALL  C IH+ + + + + K L +      G Y L+SN+YA 
Sbjct: 607 AVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYAS 666

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +G WD+  +VR +M+ TG     G S I
Sbjct: 667 KGRWDDVARVRKMMKDTGGDGSSGISLI 694



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 152/583 (26%), Positives = 300/583 (51%), Gaps = 12/583 (2%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            ++  HL  +G +     +T  ++ Y ++G +  ++ +F+     D   W  LI  Y  N
Sbjct: 73  NQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRN 132

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            +  +++ ++ +M+RE           ++ +C     +  G+ +HG  IK G D D  ++
Sbjct: 133 GYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVK 192

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            ++   Y +   L  A  +F+++  +  VSW+++I +Y  N    E + +F  M +E VE
Sbjct: 193 NALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVE 252

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            ++VT++SL  A   L       S H +V++     D  +  S +  Y+ CG++ SA   
Sbjct: 253 VNYVTIISLLSANAHL------DSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLL 306

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           +  + +R   S TAMIS Y   G     +E F +ML++K +P+ + ++++L       ++
Sbjct: 307 YNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFI 366

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             G  +H   ++ G+  +   +   LI  Y++ G +     +   +GE+ ++SWN +IS 
Sbjct: 367 GSGLGIHAYGLKTGLCADCLVVN-GLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISA 425

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCK 431
             + G + +A+EL  QM+ +G  PD+ ++AS L+ C  VG LQ G ++H +V++  +D +
Sbjct: 426 CIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDME 485

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D F++++L+DMY KCG    A  +F+ I++  +  WN+MI G+  +G+   A++ + +M 
Sbjct: 486 D-FLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQ 544

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDL 550
              L+ D +TFL  + AC++ G + +GK     +   +G+   +  +  + D+ ++ G L
Sbjct: 545 EQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFL 604

Query: 551 QTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           + A     +M  E +   W A++    +H +L     L K++L
Sbjct: 605 EEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLL 647



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 151/305 (49%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           L   H +++ TG   D    T L+ SYA  G++ S+ L+++   + +      +I  Y  
Sbjct: 268 LDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAE 327

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
                  +  + +M++ +         S+L   +    +GSG  +H   +K G   D ++
Sbjct: 328 KGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLV 387

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++  Y +FG ++    +F +M  + ++SW+S+I++       S+ +++F  M   G 
Sbjct: 388 VNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGH 447

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            PD +T+ SL   C E+  L+    +H +VLR  + ++  L  + + MY KCG L SAER
Sbjct: 448 SPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAER 507

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  I++ C  +W  MIS Y  SG   +AL  + +M E   +P+ IT + VL +C   G 
Sbjct: 508 VFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGL 567

Query: 313 LREGK 317
           + EGK
Sbjct: 568 VWEGK 572


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 208/581 (35%), Positives = 342/581 (58%), Gaps = 7/581 (1%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+++I  Y   A V  GL++++ MVR GV PD  T   + +AC +   +R  R +HG V+
Sbjct: 10  WNTLIRGY-SIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW-FQKAL 282
           +   + D  +GN+ +  Y  CG L  A R F ++ ++   SW  MI  ++ +GW ++ AL
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIE 341
           + F  M++   +PN IT+ + L     L + + G+ VH   IR  MG E D ++  +LI+
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIR--MGLESDIFIANSLID 186

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            YA+ G  +E   V + +  +N++SWN +I+ +A+      A+ L+ QMQ +G +P+S +
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVT 246

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
             + L AC  +G ++ G +IH   I + C  D FV ++L DMY+K G   LA  +F+   
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TS 305

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            +  V +N +I G  Q  +  E+++LF +M L  L+ D V+F+ A+ AC+N+  +++GK 
Sbjct: 306 LRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKE 365

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H  L+       +++  +L D Y KCG +  A+ +FD M+ ++V SW+ MI  YGM G+
Sbjct: 366 IHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGE 425

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
           L+ A  LF+ M    ++ + V+F+ +L ACSH G +E+G+ YF+ ++  G+EP   HYAC
Sbjct: 426 LDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYAC 485

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDLL R+G +E A ++I  +P   + +IWGALL  CRI+  +++     + L       
Sbjct: 486 MVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEH 545

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +GYYTLLSN+YAE G WDE  ++R +M+  G+KK PG S +
Sbjct: 546 SGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWV 586



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 171/554 (30%), Positives = 294/554 (53%), Gaps = 14/554 (2%)

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +F+W  LI+ Y         + +Y++M+R      +  +P VL+AC+   ++  G +VHG
Sbjct: 7   AFLWNTLIRGYSIAGV-GGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHG 65

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA-DVS 178
            ++K GF+ D  +  ++L  YG  G L DA +VFD+M  +D+VSW+++I  +  N     
Sbjct: 66  SVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYR 125

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L MF  M+ EG++P+ +T+ S      EL   +  R +HG  +R  ++ D  + NS I
Sbjct: 126 DALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLI 185

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G    A   F K++ +   SW AMI+ + ++ +   A+    +M +  E PN +
Sbjct: 186 DMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSV 245

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           T   VL +CA +G +R GK +H + I   MG  +D ++  AL + YA+ G +     V  
Sbjct: 246 TFTNVLPACARMGLVRPGKEIHARSIH--MGCAFDLFVSNALTDMYAKSGHLKLARNVFD 303

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
               R+ +S+N+LI  +++     E+L L  +MQ  GL  D+ S   +LSAC N+ +++ 
Sbjct: 304 T-SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQ 362

Query: 418 GLQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IHG ++ K+     FV +SL+D Y+KCG   LA  +F+R+  K V  WN+MI G+  
Sbjct: 363 GKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGM 422

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            G    AI+LF  M  + +E D V+F+  + ACS+ G LEKG+    +L + G+      
Sbjct: 423 LGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMH 482

Query: 537 DTALTDMYAKCGDLQTAQRVFDSM---SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
              + D+  + G ++ A  +   +    + N+  W A++    ++G L  AA   + + +
Sbjct: 483 YACMVDLLGRAGLMEEAAELIKGLPIVPDANI--WGALLGACRIYGNLELAAWAAEHLFE 540

Query: 594 SGIKPNEVTFMNIL 607
             +KP    +  +L
Sbjct: 541 --LKPEHSGYYTLL 552



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/568 (23%), Positives = 247/568 (43%), Gaps = 42/568 (7%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C +   +RK   +H  ++  G   D      L+  Y   G LR +  VFD   E D
Sbjct: 47  VLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKD 106

Query: 60  SFMWAVLIKCYMWNNF-FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
              W  +I  +  N + + +++ ++  MI E    ++    S L     L    +G +VH
Sbjct: 107 LVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVH 166

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G  I+ G + D  I  S++  Y + G   +A  VF K+ +++VVSW+++IA++  N    
Sbjct: 167 GSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFEL 226

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             + +   M   G  P+ VT  ++  AC  +  +RP + IH   +      D  + N+  
Sbjct: 227 VAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALT 286

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G L  A   F     R   S+  +I  ++++    ++L  F +M  +  + + +
Sbjct: 287 DMYAKSGHLKLARNVF-DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNV 345

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           + +  L +CA L  +++GK +H  ++RK +   + ++  +L++FY +CG++     +   
Sbjct: 346 SFMGALSACANLTAIKQGKEIHGFLLRK-LFHIHLFVANSLLDFYTKCGRIGLARNIFDR 404

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  +++ SWN +I  Y   G    A++L   M+   +  DS S  + LSAC + G L+ G
Sbjct: 405 MTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKG 464

Query: 419 LQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            +    +     +  +   + ++D+  + G    A  L + +     ++ ++ I G    
Sbjct: 465 RKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLP----IVPDANIWG---- 516

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
                                       + AC   G LE   W    L         Y  
Sbjct: 517 --------------------------ALLGACRIYGNLELAAWAAEHLFELKPEHSGYY- 549

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNV 565
           T L++MYA+ G    A R+ + M  R V
Sbjct: 550 TLLSNMYAETGRWDEANRIRELMKSRGV 577



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 210/484 (43%), Gaps = 38/484 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+       +    +H   +  GL  D   +  LI+ YA+ G    +  VF      + 
Sbjct: 150 LPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNV 209

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  +  N F   ++ L  +M       ++  + +VL AC+ +G +  G+++H R
Sbjct: 210 VSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHAR 269

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            I  G   D  +  ++   Y + G L  AR VFD  + RD VS++ +I  +   +D SE 
Sbjct: 270 SIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSES 328

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M   G++ D V+ +    AC  L +++  + IHG +LR+   I   + NS +  
Sbjct: 329 LSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDF 388

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG +  A   F ++  +   SW  MI  Y   G    A++ F  M +   E + ++ 
Sbjct: 389 YTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSF 448

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           I VL +C+  G L +G+    ++  +G+ P          + +  C              
Sbjct: 449 IAVLSACSHGGLLEKGRKYFDELKARGIEP---------TQMHYAC-------------- 485

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
                    ++    R G+ +EA EL+  +    ++PD+    + L AC   G+L+L   
Sbjct: 486 ---------MVDLLGRAGLMEEAAELIKGLP---IVPDANIWGALLGACRIYGNLELAAW 533

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
              H+ ++  +     + L +MY++ G  + A  + E ++ + V    S  C + Q G  
Sbjct: 534 AAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVK--KSPGCSWVQIGEQ 591

Query: 481 LEAI 484
             A 
Sbjct: 592 AHAF 595


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/721 (31%), Positives = 383/721 (53%), Gaps = 5/721 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H+ +   G   D   ST LI  Y + GSL  +R VF+  +E +   W  +I  Y+ + 
Sbjct: 222 QIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHG 281

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ L+ K+IR     +   + S+L AC++  DLG G K+H  I + G +++ ++  
Sbjct: 282 DSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGN 341

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y   G L +AR+VFD + S +  +W+++IA Y +   + E  ++F +M ++G +P
Sbjct: 342 ALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGL-MEEAFRLFRAMEQKGFQP 400

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T  SL   C +   L   + +H  +     + D  +  + I MY+KCG    A + F
Sbjct: 401 DKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVF 460

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R   SW A ISC  R    ++A ++F +M      P+ IT IT+L SC     L 
Sbjct: 461 NQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLE 520

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+ +H +I + GM    +++  ALI  Y  CG +++  +V + I  R++ SWN +I+  
Sbjct: 521 RGRYIHGKINQWGMLSN-NHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAAN 579

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
            + G +  A +L  + ++ G   D ++  + L A  N+  L  G  IHG V K    KD 
Sbjct: 580 VQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDI 639

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++LI MYSKCG    A  +F  +Q+K VV WN+M+  +  +    +A+ LF QM L 
Sbjct: 640 RVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLE 699

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +  D  T+ TA+ AC+ +  +E GK +H +L   G+  D  +  +L +MY++CG L +A
Sbjct: 700 GVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSA 759

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           ++VF+ M  R++ SW+A+I  Y  +GQ N A   ++ ML + I PN+ TF +IL + +  
Sbjct: 760 KQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQL 819

Query: 614 GSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G  E+   F  +  + + +EP  QHYA MV  L R+G ++ A + I  +   +   +W +
Sbjct: 820 GEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWES 879

Query: 673 LLNGCRIHKRIDVMKT-IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           LL  CRIH  +++ +T +E  L             L +IYA  G W++   +++ M+  G
Sbjct: 880 LLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAG 939

Query: 732 L 732
           L
Sbjct: 940 L 940



 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 214/707 (30%), Positives = 370/707 (52%), Gaps = 5/707 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H H+       D   +  LI  Y++ GS+  +  VF   ++ D   W  +I  Y  + 
Sbjct: 121 KVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHG 180

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E+  L+++M RE    +   + S+L AC S   L  GE++H RI K G++ D  + T
Sbjct: 181 RDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVST 240

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G L+ ARKVF++M  R+VVSW+++I+ Y  + D  E L +F  ++R G++P
Sbjct: 241 ALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQP 300

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + V+  S+  AC     L     +H ++ +  ++ +  +GN+ I MYS+CG L +A + F
Sbjct: 301 NKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVF 360

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +     T+W AMI+ Y   G  ++A   F  M +   +P+  T  ++L  CA    L 
Sbjct: 361 DNLRSLNRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLD 419

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H QI   G   +   +  ALI  YA+CG   E  KV + + ERN++SWN  IS  
Sbjct: 420 RGKELHSQIASTGWQTDLT-VATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCC 478

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
            R  + KEA +   QM+   + PD  +  + L++C +   L+ G  IHG + +     + 
Sbjct: 479 CRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNN 538

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++LI MY +CG    A  +F RI+++ +  WN+MI    Q+G +  A +LF +    
Sbjct: 539 HVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSE 598

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
             + D+ TF+  ++A +N+  L+ G+ +H  +   G  KDI + T L  MY+KCG L+ A
Sbjct: 599 GGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDA 658

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           + VF ++ E++VV W+AM+  Y    +  DA  LF+QM   G+ P+  T+   L AC+  
Sbjct: 659 ENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARL 718

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            +VE GK     ++  G+E D +    ++++ SR G +  A ++   M    + + W AL
Sbjct: 719 TAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKM-LSRDINSWNAL 777

Query: 674 LNG-CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
           + G C+  +    ++  E  L  +   +   +T + + YA+ G  ++
Sbjct: 778 IAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQ 824



 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 182/641 (28%), Positives = 324/641 (50%), Gaps = 6/641 (0%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           NF Y   L+ C     L  G+KVH  +    F  D  +   ++  Y + G ++DA  VF 
Sbjct: 101 NF-YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQ 159

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  +DVVSW+++I+ Y  +    E   +F+ M REG++P+  T +S+  AC    +L  
Sbjct: 160 AMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEF 219

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              IH  + +   + D  +  + I MY KCG L  A + F ++ +R   SWTAMIS Y +
Sbjct: 220 GEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 279

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G  ++AL  F K++    +PN ++  ++LG+C     L EG  +H  I + G+  E   
Sbjct: 280 HGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEV-L 338

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G ALI  Y+ CG ++   +V   +   N  +WN +I+ Y  +G+ +EA  L   M+  G
Sbjct: 339 VGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKG 397

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAY 453
             PD F+ AS L+ C +   L  G ++H  +     + +  V ++LI MY+KCG    A 
Sbjct: 398 FQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEAR 457

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F ++ +++V+ WN+ I    ++    EA   F QM  + +  D +TF+T + +C++  
Sbjct: 458 KVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPE 517

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LE+G+++H K+  +G+  + ++  AL  MY +CG+L  A+ VF  +  R++ SW+AMI 
Sbjct: 518 DLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIA 577

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
               HG    A  LF++    G K ++ TF+N+L A ++   ++ G+     +   G   
Sbjct: 578 ANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGK 637

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           D++    ++ + S+ G +  A + + S     +   W A+L       R      + +++
Sbjct: 638 DIRVLTTLIKMYSKCGSLRDA-ENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQM 696

Query: 694 SVTGTN-DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
            + G N D+  Y+   N  A     +   K+ + ++  G++
Sbjct: 697 QLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGME 737



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 255/487 (52%), Gaps = 4/487 (0%)

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           + GV+ +        + C    SL   + +H H+   + K D  L N  I MYSKCG + 
Sbjct: 93  KRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIE 152

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F  +E +   SW AMIS Y   G  Q+A + F +M     +PN  T I++L +C 
Sbjct: 153 DANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQ 212

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               L  G+ +H +I + G   + + +  ALI  Y +CG +    KV + + ERN++SW 
Sbjct: 213 SPIALEFGEQIHSRIAKAGYESDVN-VSTALINMYCKCGSLELARKVFNEMRERNVVSWT 271

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +IS Y + G S+EAL L  ++   G+ P+  S AS L AC N   L  GL++H ++ + 
Sbjct: 272 AMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQA 331

Query: 429 DCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
             + E  V ++LI MYS+CG    A  +F+ ++  +   WN+MI G Y  G   EA  LF
Sbjct: 332 GLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAG-YGEGLMEEAFRLF 390

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M     + D+ T+ + +  C++   L++GK +H ++ S G + D+ + TAL  MYAKC
Sbjct: 391 RAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKC 450

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G  + A++VF+ M ERNV+SW+A I C   H    +A   FKQM    + P+ +TF+ +L
Sbjct: 451 GSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLL 510

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            +C+    +E G++    +  +G+  +      ++ +  R G++  A ++ + +     G
Sbjct: 511 NSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLG 570

Query: 668 SIWGALL 674
           S W A++
Sbjct: 571 S-WNAMI 576



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 199/406 (49%), Gaps = 1/406 (0%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
            +L +   LH+ +  TG   D   +T LI  YA+ GS   +R VF+   E +   W   I
Sbjct: 416 ADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFI 475

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
            C   ++  +E+   + +M R+     +  + ++L +C+S  DL  G  +HG+I + G  
Sbjct: 476 SCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGML 535

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            ++ +  +++  YG  G L DAR+VF ++  RD+ SW+++IA+   +        +F   
Sbjct: 536 SNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKY 595

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             EG + D  T +++  A   L  L   R IHG V +     D  +  + I MYSKCG L
Sbjct: 596 RSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSL 655

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             AE  F  ++++    W AM++ Y  S   Q AL+ F +M      P+  T  T L +C
Sbjct: 656 RDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNAC 715

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A L  +  GK +H Q+   GM  +   +  +LIE Y+ CG +   ++V   +  R+I SW
Sbjct: 716 ARLTAVEHGKKIHAQLKEAGMETD-TRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSW 774

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           N LI+ Y + G    ALE    M    ++P+  +  S LS+   +G
Sbjct: 775 NALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLG 820



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 175/303 (57%), Gaps = 6/303 (1%)

Query: 376 RKGMS-KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
           R+G S K A++LL +    G+  +    A  L  C    SL  G ++H H+     K D 
Sbjct: 79  REGKSIKGAVQLLGKR---GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDI 135

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           ++ + LI MYSKCG    A  +F+ ++ K VV WN+MI G+  +G   EA +LF+QM   
Sbjct: 136 YLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQRE 195

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            L+ ++ TF++ + AC +   LE G+ +H ++   G   D+ + TAL +MY KCG L+ A
Sbjct: 196 GLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELA 255

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           ++VF+ M ERNVVSW+AMI  Y  HG   +A +LF++++ SGI+PN+V+F +IL AC++ 
Sbjct: 256 RKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNP 315

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
             + EG      ++  G+E ++     ++ + SR G +  A ++  ++    N + W A+
Sbjct: 316 NDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLR-SLNRTTWNAM 374

Query: 674 LNG 676
           + G
Sbjct: 375 IAG 377


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/654 (33%), Positives = 365/654 (55%), Gaps = 13/654 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV---IQTSILCTYGEFGCLDDARKVFD 154
           Y S+L+ C+S   + + +++H   I  G         + +S+   Y  FGC   ARK+FD
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLR 213
           ++ +  + SW+++I  Y ++    + L +F  M+  G   PD  T   + +ACG+     
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
               IH   +      D  + NS + MY  CG++  A R F  + +R   SW  MI+ Y 
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++G  ++AL  F  M+    EP+  T+++VL  C+ L  L  G+ VH  +  K +G +  
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
               +L++ YA+CG M E + + + + +R+++SW  +++ Y   G ++ AL L   MQ  
Sbjct: 261 VWN-SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLA 452
            + P+  ++AS LSAC ++ SL+ G  +HG  I+   + E  V+++LIDMY+KC   NL+
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
           + +F +  ++    WN++I G   NG S +AI LF QM +  ++ ++ T  + + A + +
Sbjct: 380 FRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFL 439

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM--SERNVVSWSA 570
             L++ + +H  LI  G    I + T L D+Y+KCG L++A  +F+ +   ++++++WSA
Sbjct: 440 TDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM---R 627
           +I  YGMHG    A SLF QM+ SG+KPNE+TF +IL ACSH+G V+EG   F  M    
Sbjct: 500 IIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDN 559

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
              +  D  HY C++DLL R+G +E A+++I +M F  N ++WGALL  C IH+ +++ +
Sbjct: 560 QMSLRTD--HYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGE 617

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              K L      + G Y LL+NIY+  G W +   VR +M   GL+K P +S I
Sbjct: 618 VAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLI 671



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 190/639 (29%), Positives = 331/639 (51%), Gaps = 21/639 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPAS---TRLIESYAEMGSLRSSRLVFDTFK 56
           L + CT+ + +    ++HAH +  GL   P +    + L  +YA  G    +R +FD  +
Sbjct: 24  LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELR 83

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGE 115
            P  F W  +I+ Y  +    +++ L+ +M+   +    N+ YP V++AC        G 
Sbjct: 84  NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H R +  GFD D  +Q S++  Y   G ++ AR+VFD M  R +VSW+++I  YF N 
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
            V E L +F  M+ +G+EPD  T++S+   C  L  L   R +H  V  + +  D  + N
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-E 294
           S + MY+KCG++  A+  F +++KR   SWT M++ Y  +G  + AL    +M++ +  +
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVK 322

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           PN +TL +VL +CA L  L+ G+ +H   IR+ +  E   +  ALI+ YA+C  ++   +
Sbjct: 323 PNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEV-IVETALIDMYAKCNNVNLSFR 381

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V     ++    WN +IS     G+S++A+EL  QM    + P+  ++ S L A   +  
Sbjct: 382 VFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTD 441

Query: 415 LQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMI 471
           LQ    +HG++I+        V + LID+YSKCG    A+ +F  I  + K ++ W+++I
Sbjct: 442 LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAII 501

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI---SY 528
            G+  +G+   AI+LF QM  + ++ +E+TF + + ACS+ G +++G  +   ++     
Sbjct: 502 AGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQM 561

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHG--QLNDAA 585
            +R D Y  T + D+  + G L+ A  +  +M+ R N   W A++    +H   +L + A
Sbjct: 562 SLRTDHY--TCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVA 619

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           + +   L+ G   N V   NI  A       E  +   N
Sbjct: 620 AKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMN 658


>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 236/739 (31%), Positives = 398/739 (53%), Gaps = 15/739 (2%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSS-RLVFDTFKEPDSFMWAVLIK 68
           L  L R HA  + +G   +   +++LI  Y  + +  SS   +F +    D+F++   +K
Sbjct: 20  LDSLLRFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYNSFLK 79

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
                + F   + L+  M     + ++F  P V+ A + L  L  G  +H    K G   
Sbjct: 80  SLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGLFH 139

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF---H 185
                 S +  Y   G ++ ARKVFD++  RDVV+W+++I  +  N +  +GL+     H
Sbjct: 140 S---SASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVH 196

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            +V +  +P+  T      ACG L ++     +HG V++  +     + +S + MYSKCG
Sbjct: 197 GVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVA--SFIQSSVLDMYSKCG 254

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
               A R+F ++  +    WT++I  Y R G   + L  F +M E +  P+ + +  VL 
Sbjct: 255 VPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLS 314

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
                  + +GK+ H  IIR+    + + +  +L+  Y + G +S  E++   + + +  
Sbjct: 315 GFGNSMDVFQGKAFHGVIIRRYYVDD-EKVNDSLLFMYCKFGMLSLAERIF-PLCQGSGD 372

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            WN ++  Y + G + + +EL  +MQ  G+  ++  +AS++++C  +G++ LG  IH +V
Sbjct: 373 GWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNV 432

Query: 426 IK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           IK  +D K+  V +SL++MY KCG    A+ +F    +  VV WN++I          EA
Sbjct: 433 IKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFN-TSETDVVSWNTLISSHVHIKQHEEA 491

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +NLF +M     + +  T +  + ACS++  LEKG+ VH  +   G   ++ + TAL DM
Sbjct: 492 VNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDM 551

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG LQ ++ VFDSM E++V+ W+AMI  YGM+G    A  +F+ M +S + PN +TF
Sbjct: 552 YAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITF 611

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           +++L AC+H+G VEEGK+ F  M+ + V P+L+HY CMVDLL R G+++ A  M+ SMP 
Sbjct: 612 LSLLSACAHAGLVEEGKYMFARMKSYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPI 671

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
             +G +WGALL  C+ H +I++   I K        ++GYY +++N+Y+  G W+E   V
Sbjct: 672 SPDGGVWGALLGHCKTHNQIEMGIRIAKYAIDLEPENDGYYIIMANMYSFIGRWEEAENV 731

Query: 724 RSIM-EVTGLKKVPGYSTI 741
           R  M E   + K  G+S +
Sbjct: 732 RRTMKERCSMGKKAGWSLL 750



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 1/177 (0%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
            +L K  R+H ++  +G   + P  T LI+ YA+ G L+ SR+VFD+  E D   W  +I
Sbjct: 521 ASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMI 580

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y  N + E ++ ++  M       +   + S+L AC+  G +  G+ +  R+     +
Sbjct: 581 SGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYMFARMKSYSVN 640

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKM 183
            +    T ++   G +G + +A  +   M  S D   W +++     +  +  G+++
Sbjct: 641 PNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTHNQIEMGIRI 697


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/739 (30%), Positives = 395/739 (53%), Gaps = 5/739 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-FMWA 64
           S +NL +L R+HA ++  GL      S +LI+ Y+   +  SS  VF       + ++W 
Sbjct: 16  SSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWN 75

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I+ +  N +F +++  Y K+   + +   + +PSV++AC+ L D   G+ V+ +I++ 
Sbjct: 76  SIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEM 135

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ D  +  +++  Y   G L  AR+VFD+M  RD+VSW+S+I+ Y  +    E L+++
Sbjct: 136 GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           H +    + PD  T+ S+  A   L  ++  + +HG  L+  +     + N  + MY K 
Sbjct: 196 HELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKF 255

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
                A R F ++  R + ++  MI  Y +    +++++ F++ L+ + +P+++T+ +VL
Sbjct: 256 SRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDILTVTSVL 314

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C  L  L   K ++  ++R G   E   +   LI+ YA+CG M     V +++  ++ 
Sbjct: 315 CACGHLRDLSLAKYIYNYMLRAGFVLE-STVKNILIDVYAKCGDMITARDVFNSMECKDT 373

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SWN +IS Y + G   EA++L   M       D  +    +S    +  L+ G  +H +
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSN 433

Query: 425 VIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
            IK     D  V ++LIDMY+KCG    +  +F  +     V WN++I    + G+    
Sbjct: 434 GIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATG 493

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + +  QM  N +  D  TFL  +  C+++     GK +H  L+ +G   ++ I  AL +M
Sbjct: 494 LQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCG L+++ RVF+ MS R+VV+W+ MI  YGM+G+   A   F  M  SGI P+ V F
Sbjct: 554 YSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVF 613

Query: 604 MNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + +++ACSHSG VE+G   F  M+  + ++P ++HYAC+VDLLSRS  I  A + I +MP
Sbjct: 614 IALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              + SIW ++L  CR    ++  + + + +     +D GY  L SN YA    WD+   
Sbjct: 674 IEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +R  +    +KK PGYS I
Sbjct: 734 IRKSVRDKHIKKNPGYSWI 752



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 286/561 (50%), Gaps = 4/561 (0%)

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDV 161
           RA SS  +L    ++H  +I  G D  D     ++  Y  F     +  VF +++ +++V
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNV 71

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
             W+SII ++  N    + L+ +  +    V PD  T  S+ +AC  L        ++  
Sbjct: 72  YIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQ 131

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
           +L    + D  +GN+ + MYS+ G L  A + F ++  R   SW ++IS Y+  G++++A
Sbjct: 132 ILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
           LE + ++      P+  T+ +VL + A L  +++G+ +H   ++ G+      +   L+ 
Sbjct: 192 LEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVN-SVSVVNNGLLA 250

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            Y +  + ++  +V   +  R+ +++N +I  Y +  M +E++++ ++       PD  +
Sbjct: 251 MYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILT 309

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           V S L ACG++  L L   I+ ++++     +  V++ LID+Y+KCG    A  +F  ++
Sbjct: 310 VTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSME 369

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            K  V WNS+I G+ Q+G+ +EA+ LF  M +   + D +T+L  I   + +  L+ GK 
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKG 429

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H   I  G+  D+ +  AL DMYAKCG++  + ++F+SM   + V+W+ +I      G 
Sbjct: 430 LHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGD 489

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
                 +  QM  + + P+  TF+  L  C+   +   GK     +  FG E +LQ    
Sbjct: 490 FATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549

Query: 641 MVDLLSRSGDIEGAFKMIHSM 661
           ++++ S+ G +E +F++   M
Sbjct: 550 LIEMYSKCGCLESSFRVFERM 570



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 211/419 (50%), Gaps = 2/419 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P F +   +++   LH   L +G++     +  L+  Y +      +R VFD     DS
Sbjct: 214 LPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDS 273

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +  +I  Y+     EES+ ++ + + +Q         SVL AC  L DL   + ++  
Sbjct: 274 VTYNTMICGYLKLEMVEESVKMFLENL-DQFKPDILTVTSVLCACGHLRDLSLAKYIYNY 332

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ GF  +  ++  ++  Y + G +  AR VF+ M  +D VSW+SII+ Y  + D+ E 
Sbjct: 333 MLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +K+F  M+    + D +T L L      L  L+  + +H + ++  I ID  + N+ I M
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDM 452

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG++  + + F  +    T +W  +IS   R G F   L+   +M + K  P++ T 
Sbjct: 453 YAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATF 512

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  L  CA L   R GK +HC ++R G   E   +G ALIE Y++CG +    +V   + 
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ-IGNALIEMYSKCGCLESSFRVFERMS 571

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            R++++W  +I  Y   G  ++ALE  V M+  G++PDS    + + AC + G ++ GL
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGL 630


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/704 (32%), Positives = 373/704 (52%), Gaps = 15/704 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+HAH++ +GL  D      L++ Y + GS+  +  VF +      F W  +I  +  N 
Sbjct: 7   RIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNR 66

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              ++I ++  M        +    SVL ACSSL DL  G+K+H R +  G     ++Q 
Sbjct: 67  HGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQN 126

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y     LD AR VFDK+ S+ VVSW+++IA+     +  + L++F  M    +EP
Sbjct: 127 ALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM---ELEP 183

Query: 195 DFVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           + VT  S+  AC  L   R   + IH  +    ++ +  +  + + MY K G +  A + 
Sbjct: 184 NEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQV 243

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I+ +   SW AM+  Y ++   ++ALE + +M+  K + + +T++  LG  A L  L
Sbjct: 244 FNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLL 303

Query: 314 REGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           + G  +H   +  G    YD    +  ALI  Y +C ++    +V   +   +++SW  L
Sbjct: 304 KLGIELHELSVAHG----YDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTAL 359

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI--KI 428
           I  Y + G ++EALEL  QM+  G+ PD  +  S LSAC N   L+LG  +H  ++  K 
Sbjct: 360 IVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKD 419

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLF 487
              D  + ++LI+MY KCG  +L+  +F+  +  K+VV+WN+MI  + Q G S  A++L+
Sbjct: 420 GFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLY 479

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAK 546
             M    L+ DE T  + + AC+ +  LEKG+ +H ++I S    ++  +  AL  MYA 
Sbjct: 480 DMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYAS 539

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG+++ A+ VF  M  R+VVSW+ +I  Y   G    A  L+++ML  G++P E TF+ +
Sbjct: 540 CGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCV 599

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
             AC H+G V+E K+YF +M    + P   HY+C+V +LSR+G +E A  ++HSMPF   
Sbjct: 600 FLACGHAGLVDECKWYFQSMIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPG 659

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
              W +LL  CR H  +   +    E       D+  Y LLSN+
Sbjct: 660 SVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAPYVLLSNV 703



 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 170/521 (32%), Positives = 277/521 (53%), Gaps = 22/521 (4%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L  G ++H  I+  G   D  +   +L  YG+ G +DDA +VF  +  R + SW+ IIA+
Sbjct: 2   LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAA 61

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +  N    + ++MF SM   G++PD  T+ S+  AC  L  L   + IH   L R +   
Sbjct: 62  FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSS 121

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             + N+ + MY++C  L  A   F KIE +   SW AMI+   R G  ++AL+ F +M  
Sbjct: 122 IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM-- 179

Query: 291 VKEEPNLITLITVLGSCAGLGWLRE-GKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGK 348
            + EPN +T  +V  +C+ L   RE GK +H +I  +G   E +  +  A++  Y + GK
Sbjct: 180 -ELEPNEVTFASVFNACSLLPDHREVGKRIHDRI--RGSHLEANVTVATAIVTMYGKFGK 236

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +    +V + I  +N++SWN ++  Y +  + +EALE+  +M    +  D  +V  +L  
Sbjct: 237 VGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGI 296

Query: 409 CGNVGSLQLGLQIH----GHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
             ++  L+LG+++H     H    + K   VQ++LI MY KC   + A  +F +++   V
Sbjct: 297 SASLRLLKLGIELHELSVAHGYDSNIK---VQNALISMYGKCNELDAARRVFSKVRAHDV 353

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V W ++I  + Q+G + EA+ L+ QM    +E D+VTF + + ACSN   LE G+ +H +
Sbjct: 354 VSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHAR 413

Query: 525 LISYGVRKDIYID----TALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHG 579
           L++   RKD + D     AL +MY KCG L  +  +F S  + + VV W+AMI  Y   G
Sbjct: 414 LLA---RKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEG 470

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
               A  L+  M   G+ P+E T  +IL AC+    +E+G+
Sbjct: 471 YSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGE 511



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 168/591 (28%), Positives = 302/591 (51%), Gaps = 19/591 (3%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C++LR L    ++H+  L  GL         L+  YA    L  +R+VFD  +      
Sbjct: 96  ACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVS 155

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-GEKVHGRI 121
           W  +I         E+++ L+ +M  E   ++   + SV  ACS L D    G+++H RI
Sbjct: 156 WNAMIAACARQGEAEQALQLFKRMELEPNEVT---FASVFNACSLLPDHREVGKRIHDRI 212

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
                + +  + T+I+  YG+FG +  AR+VF+ +  ++VVSW++++ +Y  N    E L
Sbjct: 213 RGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREAL 272

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH----GHVLRRKIKIDGPLGNSF 237
           +++H MV + V+ D VT++        L  L+    +H     H     IK+     N+ 
Sbjct: 273 EVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQ----NAL 328

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MY KC +L +A R F K+      SWTA+I  Y + G  ++ALE + +M     EP+ 
Sbjct: 329 ISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDK 388

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T  +VL +C+    L  G+++H +++ +  G     L  ALI  Y +CG++    ++  
Sbjct: 389 VTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQ 448

Query: 358 AIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           +  + + ++ WN +I+ Y ++G S+ A++L   M+  GL PD  +++S LSAC  +  L+
Sbjct: 449 SCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLE 508

Query: 417 LGLQIHGHVIKI-DC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            G Q+H  +I   DC ++  V ++LI MY+ CG    A  +F+R++ + VV W  +I  +
Sbjct: 509 KGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAY 568

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            Q G++  A+ L+ +M +  ++  E TFL    AC + G +++ KW    +I   +    
Sbjct: 569 VQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKWYFQSMIEDRITPTF 628

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
              + +  + ++ G L+ A+ +  SM      V W++++     HG L  A
Sbjct: 629 DHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTHGDLKRA 679



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 233/412 (56%), Gaps = 6/412 (1%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           +L   R IH H++   +  DG LG+  + MY KCG +  A + F  + +R   SW  +I+
Sbjct: 1   ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            + ++   +KA+E F  M     +P+  TL +VLG+C+ L  L EGK +H + + +G+  
Sbjct: 61  AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSS 120

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               +  AL+  YA C ++     V   I  ++++SWN +I+  AR+G +++AL+L  +M
Sbjct: 121 SI-IVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM 179

Query: 391 QTWGLMPDSFSVASSLSACGNVGS-LQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGF 448
           +   L P+  + AS  +AC  +    ++G +IH  +     +    V ++++ MY K G 
Sbjct: 180 E---LEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGK 236

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
             +A  +F  IQ K+VV WN+M+  + QN    EA+ ++H+M    ++ DEVT + A+  
Sbjct: 237 VGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGI 296

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
            +++  L+ G  +H   +++G   +I +  AL  MY KC +L  A+RVF  +   +VVSW
Sbjct: 297 SASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSW 356

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           +A+I  Y  HG+  +A  L+KQM   G++P++VTF ++L ACS++  +E G+
Sbjct: 357 TALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQ 408



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 38/261 (14%)

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L +G+ +H  +++ G+  D ++   L  MY KCG +  A +VF S+  R++ SW+ +I  
Sbjct: 2   LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAA 61

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +  +     A  +F+ M  +GIKP+  T  ++L ACS    +EEGK   +     G+   
Sbjct: 62  FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSS 121

Query: 635 L-------QHYA------------------------CMVDLLSRSGDIEGAFKMIHSMPF 663
           +         YA                         M+   +R G+ E A ++   M  
Sbjct: 122 IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMEL 181

Query: 664 PANGSIWGALLNGCRI---HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
             N   + ++ N C +   H+  +V K I     + G++     T+ + I    G + + 
Sbjct: 182 EPNEVTFASVFNACSLLPDHR--EVGKRIHDR--IRGSHLEANVTVATAIVTMYGKFGKV 237

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
           G  R +      K V  ++ +
Sbjct: 238 GMARQVFNGIQHKNVVSWNAM 258


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/595 (36%), Positives = 338/595 (56%), Gaps = 11/595 (1%)

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           RKV     SRDV    S++        + E L + ++M+ +G          L + C  L
Sbjct: 8   RKVETLANSRDV----SVLCK---TGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARL 60

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
            SL   R +H  +L+  I+ +  L N+ + MY+KCG L  A R F  I  R   SWTAMI
Sbjct: 61  RSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMI 120

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
             +       +A + +  M     +P+ +T +++L +      L+ G+ VH +I+  G+ 
Sbjct: 121 EAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLE 180

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            E   +G +L+  YA+CG +S+   +   + E+N+++W +LI+ YA++G    ALELL  
Sbjct: 181 LE-PRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLET 239

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGF 448
           MQ   + P+  + AS L  C    +L+ G ++H ++I+     E  V +SLI MY KCG 
Sbjct: 240 MQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGG 299

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  LF  +  + VV W +M+ G+ Q G   EAINLF +M    ++ D++TF + + +
Sbjct: 300 LEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTS 359

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           CS+   L++GK +H +L+  G   D+Y+ +AL  MYAKCG +  A  VF+ MSERNVV+W
Sbjct: 360 CSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAW 419

Query: 569 SAMID-CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           +A+I  C   HG+  +A   F QM   GIKP++VTF ++L AC+H G VEEG+ +F +M 
Sbjct: 420 TAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMY 479

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           + +G++P ++HY+C VDLL R+G +E A  +I SMPF    S+WGALL+ CR+H  ++  
Sbjct: 480 LDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERG 539

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +   + +     +D+G Y  LS+IYA  G +++  KVR +ME   + K PG S I
Sbjct: 540 ERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWI 594



 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 275/511 (53%), Gaps = 5/511 (0%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E++ + + MI +   + + ++  +L+ C+ L  L  G +VH  I+K G   +  ++ +
Sbjct: 28  LKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 87

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y + G L DAR+VFD +  R++VSW+++I ++       E  K + +M   G +PD
Sbjct: 88  LLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPD 147

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT +SL  A      L+  + +H  ++   ++++  +G S + MY+KCGD+  A   F 
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFD 207

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++ ++   +WT +I+ Y + G    ALE    M + +  PN IT  ++L  C     L  
Sbjct: 208 RLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEH 267

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH  II+ G G E  ++  +LI  Y +CG + E  K+   +  R++++W  +++ YA
Sbjct: 268 GKKVHRYIIQSGYGREL-WVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYA 326

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           + G   EA+ L  +MQ  G+ PD  +  S L++C +   LQ G +IH  ++      D +
Sbjct: 327 QLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVY 386

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG-FYQNGNSLEAINLFHQMYLN 493
           +QS+L+ MY+KCG  + A L+F ++ +++VV W ++I G   Q+G   EA+  F QM   
Sbjct: 387 LQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQ 446

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            ++ D+VTF + + AC+++G +E+G K      + YG++  +   +   D+  + G L+ 
Sbjct: 447 GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEE 506

Query: 553 AQRVFDSMSERNVVS-WSAMIDCYGMHGQLN 582
           A+ V  SM      S W A++    +H  + 
Sbjct: 507 AENVILSMPFIPGPSVWGALLSACRVHSDVE 537



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 275/569 (48%), Gaps = 40/569 (7%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C  LR L +   +HA +L +G+  +      L+  YA+ GSL  +R VFD+ ++ +
Sbjct: 53  LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I+ ++  N   E+   Y  M           + S+L A ++   L  G+KVH 
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I++ G + +  + TS++  Y + G +  AR +FD++  ++VV+W+ +IA Y     V  
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++  +M +  V P+ +T  S+ + C    +L   + +H ++++     +  + NS I 
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG L  A + F  +  R   +WTAM++ Y + G+  +A+  F +M +   +P+ +T
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMT 352

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL SC+   +L+EGK +H Q++  G   +  YL  AL+  YA+CG M +   V + +
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDV-YLQSALVSMYAKCGSMDDASLVFNQM 411

Query: 360 GERNILSWNMLISE-YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
            ERN+++W  +I+   A+ G  +EALE   QM+  G+ PD  +  S LSAC +VG ++ G
Sbjct: 412 SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
                            +     MY   G K +            V  ++  +    + G
Sbjct: 472 -----------------RKHFRSMYLDYGIKPM------------VEHYSCFVDLLGRAG 502

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYID 537
           +  EA N+   M           +   + AC     +E+G+     ++      D  Y+ 
Sbjct: 503 HLEEAENVILSMPFI---PGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYV- 558

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            AL+ +YA  G  + A++V   M +R+VV
Sbjct: 559 -ALSSIYAAAGRYEDAEKVRQVMEKRDVV 586


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/748 (30%), Positives = 385/748 (51%), Gaps = 21/748 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + CT  +       +H H+L +G   +      LI  YA+ G L  +  VF+    P+
Sbjct: 32  LLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPNPN 91

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W  LI  Y       E + L+ KM  +      F++ +VL ACSS G L  G+ +H 
Sbjct: 92  VFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHD 151

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +  G +   V+  +I+  YG+ G + +A+ VF+++  R++VSW+++IA+   N    +
Sbjct: 152 CAVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKD 210

Query: 180 GLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            +++FH M  +G V P+  T +S+ +AC  L  L   +S H  ++R        +GNS +
Sbjct: 211 AMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLV 270

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG +  A   F K+  R   SWT MI  Y + G+ + A + + +M     EPN +
Sbjct: 271 NMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAV 327

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T + V+ SC     L   + +H  ++  G   +   L   L+  Y +CG +     +   
Sbjct: 328 TFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDA-VLQVCLVTMYGKCGSVDSAWSIFEN 386

Query: 359 IGER--NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           + ER  N ++WN +IS  A+ G SK+ALE   +M+  G+ P+S +  +SL AC ++  L 
Sbjct: 387 LKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLT 446

Query: 417 LGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G Q+H  ++  +  +  + +++I+MY KCG  + A   F ++ ++ VV WN+MI  + Q
Sbjct: 447 RGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQ 506

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG--VRKDI 534
           +G+  +A+  F QM L     D  T+L AI AC ++  L  GK +H  + +    + +D 
Sbjct: 507 HGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDP 566

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            + TAL  MYA+CG L  A+ VF     RN+V+WS +I     HG+ N+A  LF++M   
Sbjct: 567 GVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQ 626

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
           G KP+ +TF  ++ ACS  G V++G FYF +M   + +     H+  MVDLL R+G +E 
Sbjct: 627 GTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEE 686

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGY---YTLLSN 709
           A +++   P     ++   LL  C +H  ++  ++  +  L +   N   +     +L+ 
Sbjct: 687 AEQVMRKNPCALAHAV---LLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAE 743

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           +Y   G W++  +VR  +E    ++ PG
Sbjct: 744 LYGAAGRWEDAARVRKAVESRNARREPG 771



 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 179/619 (28%), Positives = 316/619 (51%), Gaps = 15/619 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S+L+ C+      +G+ VH  I+  G   +  IQ  ++  Y + GCL+DA +VF+ + 
Sbjct: 29  YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLP 88

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           + +V SW+++I +Y     + E L +F  M  +G +PD     ++  AC    +L   ++
Sbjct: 89  NPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH   +   ++    +GN+ + +Y KCG +  A+  F ++ +R   SW A+I+   ++G 
Sbjct: 149 IHDCAVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207

Query: 278 FQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            + A++ F  M L+    PN  T ++V+ +C+ L  L  GKS H +IIR G    Y ++G
Sbjct: 208 CKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGF-DSYLFVG 266

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +L+  Y +CG +     V   +  RN++SW ++I  YA++G  + A +L  +M      
Sbjct: 267 NSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDC---E 323

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLL 455
           P++ +  + + +C     L    QIH H++      D  +Q  L+ MY KCG  + A+ +
Sbjct: 324 PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSI 383

Query: 456 FERIQQKS--VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           FE ++++S   V WN+MI G  Q+G S +A+  F +M L  +  + VT+L +++ACS++ 
Sbjct: 384 FENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLN 443

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L +G+ +H +++   +  +  +  A+ +MY KCG L  A   F  M ER+VVSW+ MI 
Sbjct: 444 DLTRGRQLHARILLENIH-EANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIA 502

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG--V 631
            Y  HG    A   FKQM   G   +  T++  + AC    S+  GK   + +      +
Sbjct: 503 TYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCL 562

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           E D      +V + +R G +  A K +       N   W  L+  C  H R +    + +
Sbjct: 563 EQDPGVATALVTMYARCGSLHDA-KSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFR 621

Query: 692 ELSVTGTNDNG--YYTLLS 708
           E+ + GT  +   + TL++
Sbjct: 622 EMQLQGTKPDALTFSTLVA 640



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 7/197 (3%)

Query: 483 AINLFHQMYLNCLE-----MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           A  L  Q ++N L+     +    + + +Q C+       GK VH  ++S G   + YI 
Sbjct: 5   ATELSLQTHINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQ 64

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
             L  MYAKCG L+ A  VF+ +   NV SW+A+I  Y   G L +   LF++M   G K
Sbjct: 65  NHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTK 124

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+   F  +L ACS +G++ EGK   +   + G+E  +   A +V+L  + G +  A  +
Sbjct: 125 PDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQVVGNA-IVNLYGKCGRVHEAKAV 183

Query: 658 IHSMPFPANGSIWGALL 674
              +P   N   W AL+
Sbjct: 184 FERLP-ERNLVSWNALI 199


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/584 (35%), Positives = 338/584 (57%), Gaps = 3/584 (0%)

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           D ++ S  ++       + E L + ++M+ +G          L + C  L SL   R +H
Sbjct: 60  DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             +L+  I+ +  L N+ + MY+KCG L  A R F  I  R   SWTAMI  +       
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +A + +  M     +P+ +T +++L +      L+ G+ VH +I + G+  E   +G +L
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELE-PRVGTSL 238

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           +  YA+CG +S+ + +   + E+N+++W +LI+ YA++G    ALELL +MQ   + P+ 
Sbjct: 239 VGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNK 298

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFER 458
            +  S L  C    +L+ G ++H ++I+     E +V ++LI MY KCG    A  LF  
Sbjct: 299 ITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGD 358

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  + VV W +M+ G+ Q G   EAI+LF +M    ++ D++TF +A+ +CS+   L++G
Sbjct: 359 LPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEG 418

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K +H +L+  G   D+Y+ +AL  MYAKCG +  A+ VF+ MSERNVV+W+AMI     H
Sbjct: 419 KSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQH 478

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQH 637
           G+  +A   F+QM   GIKP++VTF ++L AC+H G VEEG+ +F +M + +G++P ++H
Sbjct: 479 GRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEH 538

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           Y+C VDLL R+G +E A  +I +MPF    S+WGALL+ CRIH  ++  +   + +    
Sbjct: 539 YSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLD 598

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +D+G Y  LSNIYA  G +++  KVR +ME   + K PG S I
Sbjct: 599 PDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWI 642



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 279/509 (54%), Gaps = 4/509 (0%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E++ + + MI +   + + ++  +L+ C+ L  L  G +VH  I+K G   +  ++ +
Sbjct: 77  LKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y + G L DAR+VFD +  R++VSW+++I ++       E  K + +M   G +PD
Sbjct: 137 LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT +SL  A      L+  + +H  + +  ++++  +G S + MY+KCGD+  A+  F 
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+ ++   +WT +I+ Y + G    ALE   KM + +  PN IT  ++L  C     L  
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH  II+ G G E  ++  ALI  Y +CG + E  K+   +  R++++W  +++ YA
Sbjct: 317 GKKVHRYIIQSGYGREI-WVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYA 375

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           + G   EA++L  +MQ  G+ PD  +  S+L++C +   LQ G  IH  ++      D +
Sbjct: 376 QLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVY 435

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           +QS+L+ MY+KCG  + A L+F ++ +++VV W +MI G  Q+G   EA+  F QM    
Sbjct: 436 LQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495

Query: 495 LEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
           ++ D+VTF + + AC+++G +E+G K      + YG++  +   +   D+  + G L+ A
Sbjct: 496 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 555

Query: 554 QRVFDSMSERNVVS-WSAMIDCYGMHGQL 581
           + V  +M  +   S W A++    +H  +
Sbjct: 556 ENVILTMPFQPGPSVWGALLSACRIHSDV 584



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 275/568 (48%), Gaps = 39/568 (6%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C  LR L +   +HA +L +G+  +      L+  YA+ GSL  +R VFD  ++ +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I+ ++  N   E+   Y  M           + S+L A ++   L  G+KVH 
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K G + +  + TS++  Y + G +  A+ +FDK+  ++VV+W+ +IA Y     V  
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++   M +  V P+ +T  S+ + C    +L   + +H ++++     +  + N+ I 
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG L  A + F  +  R   +WTAM++ Y + G+  +A++ F +M +   +P+ +T
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + L SC+   +L+EGKS+H Q++  G   +  YL  AL+  YA+CG M +   V + +
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDV-YLQSALVSMYAKCGSMDDARLVFNQM 460

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ERN+++W  +I+  A+ G  +EALE   QM+  G+ PD  +  S LSAC +VG ++ G 
Sbjct: 461 SERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEG- 519

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
                           +     MY   G K +            V  ++  +    + G+
Sbjct: 520 ----------------RKHFRSMYLDYGIKPM------------VEHYSCFVDLLGRAGH 551

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYIDT 538
             EA N+   M     +     +   + AC     +E+G+     ++      D  Y+  
Sbjct: 552 LEEAENVILTM---PFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYV-- 606

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVV 566
           AL+++YA  G  + A++V   M +R+VV
Sbjct: 607 ALSNIYAAAGRYEDAEKVRQVMEKRDVV 634



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 166/378 (43%), Gaps = 37/378 (9%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + + CT    L    ++H +++ +G   +      LI  Y + G L+ +R +F      D
Sbjct: 304 ILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRD 363

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  Y    F +E+I L+ +M ++        + S L +CSS   L  G+ +H 
Sbjct: 364 VVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQ 423

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +++  G+  D  +Q++++  Y + G +DDAR VF++M+ R+VV+W+++I     +    E
Sbjct: 424 QLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCRE 483

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS-IHGHVLRRKIKIDGPLGNSFI 238
            L+ F  M ++G++PD VT  S+  AC  +  +   R       L   IK      + F+
Sbjct: 484 ALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFV 543

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTS-WTAMISC---YNRSGWFQKALESFVKMLEVKEE 294
            +  + G L  AE   + +  +   S W A++S    ++     ++A E+ +K L+  ++
Sbjct: 544 DLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLK-LDPDDD 602

Query: 295 PNLITLITVLGSCA---------------------GLGWLREGKSVHCQIIRKGMGPEYD 333
              + L  +  +                       G  W+     VH   +     PE  
Sbjct: 603 GAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAK 662

Query: 334 YLGPALIEFYAECGKMSE 351
                  E YAE GK++E
Sbjct: 663 -------EIYAELGKLTE 673


>gi|302787038|ref|XP_002975289.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
 gi|300156863|gb|EFJ23490.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
          Length = 730

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 223/735 (30%), Positives = 383/735 (52%), Gaps = 45/735 (6%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H+ L  TG+  +      L++ Y + G+L  +R  FD   E + F W+++I  Y  + 
Sbjct: 2   RIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRHR 61

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E+I L+H M      ++   + + L ACSS   L +G+K+H +I+    + +  +  
Sbjct: 62  LSREAIELFHAMDVRPNCVT---FINTLGACSSAEFLETGKKIHAQIVAGEVELELNLAN 118

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y   G L DA++ FD M  R+VVSW+ IIA++  +    E + +F+ M ++G +P
Sbjct: 119 SLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFKP 178

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D V+ +S+  AC  L  L   R IH      ++K+D  +GN+ + MY++CG L  A   F
Sbjct: 179 DRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVF 238

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             I  R   SWT+MI+ Y +   F  A E F KM      PN +T IT+LG+CA    L+
Sbjct: 239 DSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GVAPNEVTFITILGACAEARALK 295

Query: 315 EGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIH--AIGERNILSWNMLI 371
           + + +H  ++  G+  +    +G  LI  YA+CG +S+ + V    A  ERN+++W  +I
Sbjct: 296 QAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSII 355

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC- 430
           +     G  +EAL L  +M+  G+  +  +  + LSAC ++GS +    +HG ++     
Sbjct: 356 AACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYD 415

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFER----------------IQQ------------- 461
           +D  V + LI+M+ KCG    A  +FER                IQQ             
Sbjct: 416 RDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQM 475

Query: 462 -----KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
                K V+ W +M+  + Q G + EA+ L+ +M L  +  DE+TF+  + ACS +G  +
Sbjct: 476 ERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKK 535

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +G  +   ++  G+     +   L   Y  CG    A+ VF++++ER+  +W+A I   G
Sbjct: 536 EGWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSG 595

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDL 635
            HG  +++  LF++M+  G++P+E+TF N+L++CSHSG +E    +F  MR   G+EP++
Sbjct: 596 QHGFYDESLRLFERMVLEGMEPDEITFTNVLFSCSHSGEIERAWRWFLVMRGDHGMEPNV 655

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +H+ C+ DL  R G I+ A +++  +P       W  LL+GC++H  +   +   +    
Sbjct: 656 EHWGCLADLFGRLGWIDEAERLVSFLPRTRASIAWTTLLSGCKVHGDVSTAERAAERAMA 715

Query: 696 TGTNDNGYYTLLSNI 710
              + +  Y LLS++
Sbjct: 716 VDPSKSSPYVLLSHL 730



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 274/522 (52%), Gaps = 13/522 (2%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R IH  + R  I  +  LGN+ + MY KCG+L  A   F  I ++   SW+ +I  Y+R 
Sbjct: 1   RRIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRH 60

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
              ++A+E F  M +V+  PN +T I  LG+C+   +L  GK +H QI+   +  E + L
Sbjct: 61  RLSREAIELFHAM-DVR--PNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELN-L 116

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             +LI  Y+ CG + + ++    +  RN++SWN +I+ ++  G  +EA++L  +M+  G 
Sbjct: 117 ANSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGF 176

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYL 454
            PD  S  S  SAC  +  L  G +IH        K D  + ++L++MY++CG  + A L
Sbjct: 177 KPDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARL 236

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+ I  +++V W SMI  + Q     +A  +F +M    +  +EVTF+T + AC+    
Sbjct: 237 VFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GVAPNEVTFITILGACAEARA 293

Query: 515 LEKGKWVHHKLISYGV--RKDIYIDTALTDMYAKCGDLQTAQRVFDSM--SERNVVSWSA 570
           L++ + +H  +++ G+  ++ + +   L + YAKCG L  A+ VF+SM  +ERNVV+W++
Sbjct: 294 LKQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTS 353

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           +I   G+ G   +A +LF +M   GI  NE+TF  +L AC+  GS  E ++    +   G
Sbjct: 354 IIAACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGG 413

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
            + D      ++++  + G +E A  +   M    N   W  +L      + I    ++ 
Sbjct: 414 YDRDTVVCNGLINMFGKCGMLEDARAIFERMR-SRNLVTWTGMLGAYIQQQEIRQAVSLF 472

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           +++      D   +T +   YA+ G  DE  K+ + M + G+
Sbjct: 473 QQMERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGV 514


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/646 (33%), Positives = 366/646 (56%), Gaps = 9/646 (1%)

Query: 98  YPSV--LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           +PSV  L  C+S  +L    ++   IIK GF  + + QT ++  + +FG   +A +VF+ 
Sbjct: 48  HPSVVLLENCTSKKEL---YQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEH 104

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           +  +  V +  ++  Y  N+ + + L  F  M+ + V         L + CGE   L+  
Sbjct: 105 VELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKG 164

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R IHG ++    + +  +  + + +Y+KC  + +A + F +++ +   SWT +++ Y ++
Sbjct: 165 REIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQN 224

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  ++AL+  ++M E  ++P+ +TL+++L + A +  LR G+S+H    R G     + +
Sbjct: 225 GHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVN-V 283

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++ Y +CG       V   +  + ++SWN +I   A+ G S+EA    ++M   G 
Sbjct: 284 TNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGE 343

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYL 454
           +P   ++   L AC N+G L+ G  +H  + K+       V +SLI MYSKC   ++A  
Sbjct: 344 VPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAAS 403

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F  ++ K+ V WN+MI G+ QNG   EA+NLF  M    +++D  T +  I A ++   
Sbjct: 404 IFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSV 462

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
             + KW+H   +   +  ++++ TAL DMYAKCG ++TA+++FD M ER+V++W+AMID 
Sbjct: 463 NRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDG 522

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEP 633
           YG HG   +   LF +M    +KPN++TF++++ ACSHSG VEEG   F +M+  + +EP
Sbjct: 523 YGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEP 582

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            + HY+ MVDLL R+G ++ A+  I  MP     S+ GA+L  C+IHK +++ +   ++L
Sbjct: 583 TMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKL 642

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
                ++ GY+ LL+NIYA    WD+  KVR+ ME  GL K PG S
Sbjct: 643 FKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 177/634 (27%), Positives = 330/634 (52%), Gaps = 40/634 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  +CT+ ++L ++   ++  G + +    T++I  + + GS   +  VF+  +     +
Sbjct: 53  LLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVL 112

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           + +++K Y  N+   +++  + +M+ ++  +    Y  +L+ C    DL  G ++HG II
Sbjct: 113 YHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLII 172

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
             GF+ +  + T+++  Y +   +D+A K+F++M  +D+VSW++++A Y  N      L+
Sbjct: 173 TNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQ 232

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +   M   G +PD VT++S+  A  ++ +LR  RSIHG+  R   +    + N+ + MY 
Sbjct: 233 LVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYF 292

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG    A   F  +  +   SW  MI    ++G  ++A  +F+KML+  E P  +T++ 
Sbjct: 293 KCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL +CA LG L  G  VH  + +  +      +  +LI  Y++C ++     + + + + 
Sbjct: 353 VLLACANLGDLERGWFVHKLLDKLKLDSNVSVMN-SLISMYSKCKRVDIAASIFNNLEKT 411

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           N+ +WN +I  YA+ G  KEAL L   MQ+ G+  D F++   ++A  +    +    IH
Sbjct: 412 NV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIH 470

Query: 423 GHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           G  ++  C D   FV ++L+DMY+KCG    A  LF+ +Q++ V+ WN+MI G+  +G  
Sbjct: 471 GLAVRA-CMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVG 529

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            E ++LF++M    ++ +++TFL+ I ACS+ G +E+G      L+   +++D Y++  +
Sbjct: 530 KETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEG-----LLLFKSMQEDYYLEPTM 584

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
                                      +SAM+D  G  GQL+DA +  ++M    IKP  
Sbjct: 585 D-------------------------HYSAMVDLLGRAGQLDDAWNFIQEM---PIKPGI 616

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
                +L AC    +VE G+    A ++F ++PD
Sbjct: 617 SVLGAMLGACKIHKNVELGE--KAAQKLFKLDPD 648



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 166/344 (48%), Gaps = 7/344 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR    +H +   +G       +  L++ Y + GS R +RLVF   +    
Sbjct: 253 LPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTV 312

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I     N   EE+   + KM+ E    +      VL AC++LGDL  G  VH  
Sbjct: 313 VSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKL 372

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           + K   D +  +  S++  Y +   +D A  +F+ +   + V+W+++I  Y  N  V E 
Sbjct: 373 LDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEA 431

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M  +G++ D  T++ +  A  +    R A+ IHG  +R  +  +  +  + + M
Sbjct: 432 LNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDM 491

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A + F  +++R   +W AMI  Y   G  ++ L+ F +M +   +PN IT 
Sbjct: 492 YAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITF 551

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           ++V+ +C+  G++ EG      ++ K M  +Y YL P +  + A
Sbjct: 552 LSVISACSHSGFVEEG-----LLLFKSMQEDY-YLEPTMDHYSA 589


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 240/749 (32%), Positives = 391/749 (52%), Gaps = 45/749 (6%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           L + C   R L    ++HA +L  G  +  +    T+L+  YA+      +  +F   + 
Sbjct: 85  LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 144

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA ++       F E+++L + +M        NF+ P+VL+AC SL  +G G+ V
Sbjct: 145 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 204

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K GF     + +S++  YG+ G L+DARKVFD M  ++VV+W+S+I  Y  N   
Sbjct: 205 HGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLN 264

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E + +F+ M  EG+EP  VT+ S   A   L +L   +  H   +   + +D  LG+S 
Sbjct: 265 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 324

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I  YSK G +  AE  F ++ ++   +W  +IS Y +     KAL     M  +    NL
Sbjct: 325 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKAL----NMCHLMRSENL 380

Query: 298 ----ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +TL ++L + A    ++ GK  HC  IR+ +  +   +  ++I+ YA+C ++ +  
Sbjct: 381 RFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDV-VVANSIIDMYAKCERIDDAR 439

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV  +  ER+++ WN L++ YA+ G+S EAL+L  QMQ   + P+  S  S +       
Sbjct: 440 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI------- 492

Query: 414 SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
              LG   +G V   + KD F Q          GF            Q +++ W ++I G
Sbjct: 493 ---LGFLRNGQVN--EAKDMFSQ------MQSLGF------------QPNLITWTTLISG 529

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             Q+G   EAI  F +M    +     +  + + AC++I  L  G+ +H  +  +     
Sbjct: 530 LAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLS 589

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + + T+L DMYAKCG +  A++VF  MS + +  ++AMI  Y +HGQ  +A +LFK +  
Sbjct: 590 VPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQK 649

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
            GI+P+ +TF +IL ACSH+G V EG   + + +    + P ++HY C+V LLSR G+++
Sbjct: 650 EGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLD 709

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A ++I +MPF  +  I G+LL  CR H  I++ + + K L     +++G Y  LSN YA
Sbjct: 710 EALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYA 769

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G W E   +R +M+V GL+K PG S I
Sbjct: 770 AAGRWVEVSNMRDLMKVRGLRKNPGCSWI 798


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/731 (30%), Positives = 375/731 (51%), Gaps = 3/731 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++HA +L  GL         LI+ Y+  G +  +R VFD  +  D   W  +I     
Sbjct: 166 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 225

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N    E+I L+  M       + + + SVL AC  +  L  GE++HG ++K GF  D  +
Sbjct: 226 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 285

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y   G L  A  +F  M+ RD V+++++I          + +++F  M  +G+
Sbjct: 286 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 345

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           EPD  T+ SL  AC    +L   + +H +  +     +  +  + + +Y+KC D+ +A  
Sbjct: 346 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 405

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F++ E      W  M+  Y      + +   F +M   +  PN  T  ++L +C  LG 
Sbjct: 406 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 465

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H QII+        Y+   LI+ YA+ GK+     ++     ++++SW  +I+
Sbjct: 466 LELGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 524

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCK 431
            Y +     +AL    QM   G+  D   + +++SAC  + +L+ G QIH    +     
Sbjct: 525 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 584

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D   Q++L+ +YS+CG    +YL FE+ +    + WN+++ GF Q+GN+ EA+ +F +M 
Sbjct: 585 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 644

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              ++ +  TF +A++A S    +++GK VH  +   G   +  +  AL  MYAKCG + 
Sbjct: 645 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 704

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A++ F  +S +N VSW+A+I+ Y  HG  ++A   F QM+ S ++PN VT + +L ACS
Sbjct: 705 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 764

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G V++G  YF +M   +G+ P  +HY C+VD+L+R+G +  A + I  MP   +  +W
Sbjct: 765 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 824

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL+ C +HK +++ +     L      D+  Y LLSN+YA    WD     R  M+  
Sbjct: 825 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 884

Query: 731 GLKKVPGYSTI 741
           G+KK PG S I
Sbjct: 885 GVKKEPGQSWI 895



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/669 (26%), Positives = 321/669 (47%), Gaps = 6/669 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH+ +L  GL  +   S +L + Y   G L  +  VFD   E   F W  +IK     N
Sbjct: 66  KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 125

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGFDKDDVI 132
              E   L+ +M+ E  T +   +  VL AC   G +     E++H RI+  G     V+
Sbjct: 126 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVV 184

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++  Y   G +D AR+VFD +  +D  SW ++I+    N   +E +++F  M   G+
Sbjct: 185 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 244

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P      S+  AC ++ SL     +HG VL+     D  + N+ + +Y   G+L+SAE 
Sbjct: 245 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 304

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  + +R   ++  +I+  ++ G+ +KA+E F +M     EP+  TL +++ +C+  G 
Sbjct: 305 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 364

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H    + G        G AL+  YA+C  +             N++ WN+++ 
Sbjct: 365 LFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y      + +  +  QMQ   ++P+ ++  S L  C  +G L+LG QIH  +IK + + 
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 483

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           + +V S LIDMY+K G  + A+ +  R   K VV W +MI G+ Q     +A+  F QM 
Sbjct: 484 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              +  DEV    A+ AC+ +  L++G+ +H +    G   D+    AL  +Y++CG ++
Sbjct: 544 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 603

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            +   F+     + ++W+A++  +   G   +A  +F +M   GI  N  TF + + A S
Sbjct: 604 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 663

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            + ++++GK     +   G + + +    ++ + ++ G I  A K    +    N   W 
Sbjct: 664 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNEVSWN 722

Query: 672 ALLNGCRIH 680
           A++N    H
Sbjct: 723 AIINAYSKH 731



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 308/627 (49%), Gaps = 7/627 (1%)

Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
           G L  G K+H +I+K G D +  +   +   Y   G L  A KVFD+M  R + +W+ +I
Sbjct: 59  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 118

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKI 227
                   + E   +F  MV E V P+  T   + EAC G   +      IH  +L + +
Sbjct: 119 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 178

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
           +    + N  I +YS+ G +  A R F  +  +  +SW AMIS  +++    +A+  F  
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 238

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M  +   P      +VL +C  +  L  G+ +H  +++ G   +  Y+  AL+  Y   G
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNALVSLYFHLG 297

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            +   E +   + +R+ +++N LI+  ++ G  ++A+EL  +M   GL PDS ++AS + 
Sbjct: 298 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 357

Query: 408 ACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC   G+L  G Q+H +  K+    +  ++ +L+++Y+KC     A   F   + ++VV+
Sbjct: 358 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 417

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WN M+  +    +   +  +F QM +  +  ++ T+ + ++ C  +G LE G+ +H ++I
Sbjct: 418 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 477

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
               + + Y+ + L DMYAK G L TA  +    + ++VVSW+ MI  Y  +   + A +
Sbjct: 478 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 537

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
            F+QMLD GI+ +EV   N + AC+   +++EG+       + G   DL     +V L S
Sbjct: 538 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 597

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R G IE ++          N + W AL++G +     +    +   ++  G  DN  +T 
Sbjct: 598 RCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNEEALRVFVRMNREGI-DNNNFTF 655

Query: 707 LSNIYA--EEGNWDEFGKVRSIMEVTG 731
            S + A  E  N  +  +V +++  TG
Sbjct: 656 GSAVKAASETANMKQGKQVHAVITKTG 682



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 224/465 (48%), Gaps = 37/465 (7%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L  L    ++H+ ++ T    +    + LI+ YA++G L ++  +   F   D
Sbjct: 456 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 515

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y   NF ++++  + +M+            + + AC+ L  L  G+++H 
Sbjct: 516 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 575

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +    GF  D   Q +++  Y   G ++++   F++  + D ++W+++++ +  + +  E
Sbjct: 576 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 635

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M REG++ +  T  S  +A  E  +++  + +H  + +     +  + N+ I 
Sbjct: 636 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 695

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  AE+ F+++  +   SW A+I+ Y++ G+  +AL+SF +M+     PN +T
Sbjct: 696 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 755

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ VL +C+ +G + +G +       + M  EY  L P                K  H +
Sbjct: 756 LVGVLSACSHIGLVDKGIAYF-----ESMNSEYG-LSP----------------KPEHYV 793

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              ++L+         R G+   A E + +M    + PD+    + LSAC    ++++G 
Sbjct: 794 CVVDMLT---------RAGLLSRAKEFIQEMP---IKPDALVWRTLLSACVVHKNMEIGE 841

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
               H+++++ +D      L ++Y+     +   L  +++++K V
Sbjct: 842 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 886


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/587 (34%), Positives = 338/587 (57%), Gaps = 3/587 (0%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  RDVVSW+S+++++  N    +  +   SM+R G   +  +++S+  ACG     +  
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
            SIH   ++  +     L N+ + MY K GD+ ++ + F  + ++   SW + I C+  +
Sbjct: 61  LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G++   L  F KM E    P  ITL ++L +   LG    G+ VH   I++ M  +  ++
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDI-FV 179

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             +L++ YA+ G + +   +   + +RN++SWN +I+   + G   EA  L+  MQ  G 
Sbjct: 180 ANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGE 239

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYL 454
            P+S ++ + L AC  + SL++G QIH   I+     D F+ ++LIDMYSKCG  +LA  
Sbjct: 240 CPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARN 299

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +FER  +K  V +N++I G+ Q+    E++ LF QM    ++ D V+F+ A+ AC+N+  
Sbjct: 300 IFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSV 358

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
            + GK +H  L+   +    ++  +L D+Y K G L TA ++F+ +++++V SW+ MI  
Sbjct: 359 FKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILG 418

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           YGMHGQ++ A  LF+ M   G+  + V+++ +L ACSH G V++GK YF+ M    +EP 
Sbjct: 419 YGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQ 478

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
             HYACMVDLL R+G +    ++I  MPFPAN  +WGALL  CRIH  I++ +   + L 
Sbjct: 479 QMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLF 538

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 +GYYTL+ N+YAE G W+E  K+R +M+   ++K P YS +
Sbjct: 539 ELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWV 585



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 297/595 (49%), Gaps = 40/595 (6%)

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E D   W  L+  ++ N  F ++      M+R    ++     SV+ AC +  +   G  
Sbjct: 3   ERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLS 62

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H   +K G +    +  +++  YG+FG ++ + +VFD M  ++ VSW+S I  + +   
Sbjct: 63  IHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGF 122

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             + L+MF  M    V P  +T+ SL  A  EL S    R +HG+ ++R + +D  + NS
Sbjct: 123 YGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANS 182

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY+K G L  A   F +++ R   SW AMI+   ++G   +A      M +  E PN
Sbjct: 183 LVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPN 242

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            ITL+ VL +CA +  L+ GK +H   IR+G+  +  ++  ALI+ Y++CG++S    + 
Sbjct: 243 SITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDL-FISNALIDMYSKCGQLSLARNIF 301

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               E++ +S+N LI  Y++     E+L L  QM++ G+  D+ S   +LSAC N+   +
Sbjct: 302 ER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFK 360

Query: 417 LGLQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G +IH  ++ ++     F+ +SL+D+Y+K G    A  +F +I +K V  WN+MI G+ 
Sbjct: 361 HGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYG 420

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
            +G    A  LF  M  + L+ D V+++  + ACS+ G ++KGK    K  S  V ++I 
Sbjct: 421 MHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGK----KYFSQMVAQNI- 475

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
                                     E   + ++ M+D  G  GQL+  A + + M    
Sbjct: 476 --------------------------EPQQMHYACMVDLLGRAGQLSKCAEIIRDM---P 506

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ-HYACMVDLLSRSG 649
              N   +  +L AC   G++E  ++   A  +F ++P+   +Y  M+++ + +G
Sbjct: 507 FPANSDVWGALLGACRIHGNIELAQWA--AEHLFELKPEHSGYYTLMINMYAETG 559



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 219/433 (50%), Gaps = 3/433 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +  GL+     +  L++ Y + G + +S  VFD   E +   W   I C++   F
Sbjct: 63  IHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGF 122

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           + + + ++ KM        +    S+L A   LG    G +VHG  IK   D D  +  S
Sbjct: 123 YGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANS 182

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +FG L+ A  +F++M  R+VVSW+++IA+   N   +E  ++   M + G  P+
Sbjct: 183 LVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPN 242

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T++++  AC  + SL+  + IH   +RR +  D  + N+ I MYSKCG L  A   F 
Sbjct: 243 SITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE 302

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           + EK    S+  +I  Y++S W  ++L  F +M  V  + + ++ +  L +C  L   + 
Sbjct: 303 RSEKD-DVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKH 361

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +HC ++R+ +   + +L  +L++ Y + G +    K+ + I ++++ SWN +I  Y 
Sbjct: 362 GKEIHCVLVRRLLSG-HPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYG 420

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
             G    A EL   M+  GL  D  S  + L+AC + G +  G +    ++  + + + +
Sbjct: 421 MHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQM 480

Query: 436 Q-SSLIDMYSKCG 447
             + ++D+  + G
Sbjct: 481 HYACMVDLLGRAG 493



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 153/364 (42%), Gaps = 37/364 (10%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P      +L+   ++HA  +  GL +D   S  LI+ Y++ G L  +R +F+   E D 
Sbjct: 250 LPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDD 308

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +  LI  Y  + +  ES+LL+ +M           +   L AC++L     G+++H  
Sbjct: 309 VSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCV 368

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++        +  S+L  Y + G L  A K+F+K+T +DV SW+++I  Y  +  +   
Sbjct: 369 LVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIA 428

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            ++F  M  +G++ D V+ +++  AC            HG ++ +  K        F  M
Sbjct: 429 FELFELMKGDGLDYDHVSYIAVLAACS-----------HGGLVDKGKKY-------FSQM 470

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            ++             IE +    +  M+    R+G   K  E    M       N    
Sbjct: 471 VAQ------------NIEPQ-QMHYACMVDLLGRAGQLSKCAEIIRDM---PFPANSDVW 514

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +LG+C   G +   +     +    + PE+      +I  YAE G+ +E  K+   + 
Sbjct: 515 GALLGACRIHGNIELAQWAAEHLFE--LKPEHSGYYTLMINMYAETGRWNEANKIRKLMK 572

Query: 361 ERNI 364
            R +
Sbjct: 573 SRKV 576


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/755 (29%), Positives = 393/755 (52%), Gaps = 23/755 (3%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + +  SC + R+L     +HA  L  G   +   +T L+  Y + G+L  ++ VF+   E
Sbjct: 62  VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121

Query: 58  PDSFMWAVLIKCY-MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
            +   W  ++  Y +    ++ ++ L+ +M+ E    +   + +VL +      L  G+ 
Sbjct: 122 KNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKF 181

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  + +     D  + T+++ TY + G L DARKVFD M  R V +W+S+I++Y  +  
Sbjct: 182 IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISER 241

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E   +F  M +EG   D VT LS+ +AC    +L+  + +   +     ++D  +G +
Sbjct: 242 SGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTA 301

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY++C     A + F ++++    +W+A+I+ +   G   +AL  F  M +    PN
Sbjct: 302 LITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPN 361

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T I++L        L E   +H  I   G+  +   +  AL+  Y  C    +   V 
Sbjct: 362 RVTFISLLNGFTTPSGLEELSRIHLLITEHGL-DDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +   N++SWN +I  Y +     +AL+L   MQ  G+ PD  +  + L AC  +GS  
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC-TIGS-- 477

Query: 417 LGLQIHGHVIKI--DCKDE-------FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
                HG   K+   C +E        VQ+SL++MY+K G  ++A ++ + + ++ +  W
Sbjct: 478 -----HGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAW 532

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           N +I G+  +G S EA+  + ++ L  + +D+VTF++ + AC++   L +GK +H   + 
Sbjct: 533 NVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 592

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            G+  D+ +  ALT+MY+KCG ++ A+R+FDSM  R+ VSW+ M+  Y  HG+  +   L
Sbjct: 593 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 652

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLS 646
            ++M   G+K N +TF+++L +CSH+G + EG  YF+++    G+E   +HY C+VDLL 
Sbjct: 653 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLG 712

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R+G ++ A K I  MP       W +LL  CR+ K +D  K    +L      ++    +
Sbjct: 713 RAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVV 772

Query: 707 LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           LSNIY+E G+W    K+R  M    +KKVPG S+I
Sbjct: 773 LSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSI 807



 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 179/676 (26%), Positives = 344/676 (50%), Gaps = 8/676 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y+  GSL  +   F   +  +   W V+I  Y     F+E++ L+H M+ E    +    
Sbjct: 2   YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
            +VL +C S  +L  G  VH   ++ GF ++ ++ T++L  YG+ G L DA+ VF++M  
Sbjct: 62  VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121

Query: 159 RDVVSWSSIIASY-FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           ++VV+W++++  Y          +++F  M+ EGV+ + +T L++  +  +  +LR  + 
Sbjct: 122 KNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKF 181

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  V   +  +D  +  + +  Y+KCG L  A + F  +  R   +W +MIS Y+ S  
Sbjct: 182 IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISER 241

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLG 336
             +A   F +M +  E  + +T +++L +C     L+ GK V   I       E D ++G
Sbjct: 242 SGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSF--ELDLFVG 299

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            ALI  YA C    +  +V   + + N+++W+ +I+ +A  G   EAL     MQ  G++
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLL 455
           P+  +  S L+       L+   +IH  + +    D   ++++L+++Y +C   + A  +
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTV 419

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F++++  +++ WNSMI  + Q     +A+ LF  M    ++ D V F+T + AC+     
Sbjct: 420 FDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHG 479

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
              K VH  +   G+     + T+L +MYAK G+L  A+ +   M E+ + +W+ +I+ Y
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGY 539

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
            +HG+  +A   ++++    I  ++VTF+++L AC+ S S+ EGK   +     G++ D+
Sbjct: 540 ALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 599

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
                + ++ S+ G +E A ++  SMP  +  S W  +L     H   + +  + +++  
Sbjct: 600 IVKNALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESEEVLKLIRKMEQ 658

Query: 696 TGTNDNG--YYTLLSN 709
            G   NG  + ++LS+
Sbjct: 659 EGVKLNGITFVSVLSS 674



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 201/381 (52%), Gaps = 3/381 (0%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYS+CG L  A   F KI  R   SW  MIS Y+    FQ+AL  F  ML     PN IT
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ VL SC     LR+G  VH   + +G   +   +  AL+  Y +CG + + + V   +
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFF-QNTLVATALLNMYGKCGTLLDAQSVFEEM 119

Query: 360 GERNILSWNMLISEYARKGMS-KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
            E+N+++WN ++  Y+ +G   K A+EL  +M   G+  +  +  + L++  +  +L+ G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             IH  V + +   D FV ++L++ Y+KCG    A  +F+ +  +SV  WNSMI  +  +
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
             S EA  +F +M       D VTFL+ + AC N   L+ GK V   +       D+++ 
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           TAL  MYA+C   + A +VF  M + N+++WSA+I  +  HG   +A   F+ M   GI 
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359

Query: 598 PNEVTFMNILWACSHSGSVEE 618
           PN VTF+++L   +    +EE
Sbjct: 360 PNRVTFISLLNGFTTPSGLEE 380



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 131/242 (54%), Gaps = 2/242 (0%)

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MYS+CG    A   F +I+ ++VV WN MI  +    +  EA+ LFH M L  +  + +T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            +  + +C +  +L  G  VH   +  G  ++  + TAL +MY KCG L  AQ VF+ M+
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 562 ERNVVSWSAMIDCYGMHGQL-NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           E+NVV+W+AM+  Y + G     A  LF +ML  G+K N +TF+N+L +     ++ +GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           F  + +R      D+     +V+  ++ G +  A K+   MP  + G+ W ++++   I 
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGT-WNSMISAYSIS 239

Query: 681 KR 682
           +R
Sbjct: 240 ER 241


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/731 (30%), Positives = 375/731 (51%), Gaps = 3/731 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++HA +L  GL         LI+ Y+  G +  +R VFD  +  D   W  +I     
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N    E+I L+  M       + + + SVL AC  +  L  GE++HG ++K GF  D  +
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y   G L  A  +F  M+ RD V+++++I          + +++F  M  +G+
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           EPD  T+ SL  AC    +L   + +H +  +     +  +  + + +Y+KC D+ +A  
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F++ E      W  M+  Y      + +   F +M   +  PN  T  ++L +C  LG 
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H QII+        Y+   LI+ YA+ GK+     ++     ++++SW  +I+
Sbjct: 506 LELGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCK 431
            Y +     +AL    QM   G+  D   + +++SAC  + +L+ G QIH    +     
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D   Q++L+ +YS+CG    +YL FE+ +    + WN+++ GF Q+GN+ EA+ +F +M 
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              ++ +  TF +A++A S    +++GK VH  +   G   +  +  AL  MYAKCG + 
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A++ F  +S +N VSW+A+I+ Y  HG  ++A   F QM+ S ++PN VT + +L ACS
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G V++G  YF +M   +G+ P  +HY C+VD+L+R+G +  A + I  MP   +  +W
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL+ C +HK +++ +     L      D+  Y LLSN+YA    WD     R  M+  
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 924

Query: 731 GLKKVPGYSTI 741
           G+KK PG S I
Sbjct: 925 GVKKEPGQSWI 935



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/669 (26%), Positives = 321/669 (47%), Gaps = 6/669 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH+ +L  GL  +   S +L + Y   G L  +  VFD   E   F W  +IK     N
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGFDKDDVI 132
              E   L+ +M+ E  T +   +  VL AC   G +     E++H RI+  G     V+
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVV 224

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++  Y   G +D AR+VFD +  +D  SW ++I+    N   +E +++F  M   G+
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P      S+  AC ++ SL     +HG VL+     D  + N+ + +Y   G+L+SAE 
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  + +R   ++  +I+  ++ G+ +KA+E F +M     EP+  TL +++ +C+  G 
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H    + G        G AL+  YA+C  +             N++ WN+++ 
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y      + +  +  QMQ   ++P+ ++  S L  C  +G L+LG QIH  +IK + + 
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           + +V S LIDMY+K G  + A+ +  R   K VV W +MI G+ Q     +A+  F QM 
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              +  DEV    A+ AC+ +  L++G+ +H +    G   D+    AL  +Y++CG ++
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            +   F+     + ++W+A++  +   G   +A  +F +M   GI  N  TF + + A S
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            + ++++GK     +   G + + +    ++ + ++ G I  A K    +    N   W 
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNEVSWN 762

Query: 672 ALLNGCRIH 680
           A++N    H
Sbjct: 763 AIINAYSKH 771



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 308/627 (49%), Gaps = 7/627 (1%)

Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
           G L  G K+H +I+K G D +  +   +   Y   G L  A KVFD+M  R + +W+ +I
Sbjct: 99  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKI 227
                   + E   +F  MV E V P+  T   + EAC G   +      IH  +L + +
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
           +    + N  I +YS+ G +  A R F  +  +  +SW AMIS  +++    +A+  F  
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M  +   P      +VL +C  +  L  G+ +H  +++ G   +  Y+  AL+  Y   G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNALVSLYFHLG 337

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            +   E +   + +R+ +++N LI+  ++ G  ++A+EL  +M   GL PDS ++AS + 
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397

Query: 408 ACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC   G+L  G Q+H +  K+    +  ++ +L+++Y+KC     A   F   + ++VV+
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WN M+  +    +   +  +F QM +  +  ++ T+ + ++ C  +G LE G+ +H ++I
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
               + + Y+ + L DMYAK G L TA  +    + ++VVSW+ MI  Y  +   + A +
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
            F+QMLD GI+ +EV   N + AC+   +++EG+       + G   DL     +V L S
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R G IE ++          N + W AL++G +     +    +   ++  G  DN  +T 
Sbjct: 638 RCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNEEALRVFVRMNREGI-DNNNFTF 695

Query: 707 LSNIYA--EEGNWDEFGKVRSIMEVTG 731
            S + A  E  N  +  +V +++  TG
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTG 722



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 224/465 (48%), Gaps = 37/465 (7%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L  L    ++H+ ++ T    +    + LI+ YA++G L ++  +   F   D
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y   NF ++++  + +M+            + + AC+ L  L  G+++H 
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +    GF  D   Q +++  Y   G ++++   F++  + D ++W+++++ +  + +  E
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M REG++ +  T  S  +A  E  +++  + +H  + +     +  + N+ I 
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  AE+ F+++  +   SW A+I+ Y++ G+  +AL+SF +M+     PN +T
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ VL +C+ +G + +G +       + M  EY  L P                K  H +
Sbjct: 796 LVGVLSACSHIGLVDKGIAYF-----ESMNSEYG-LSP----------------KPEHYV 833

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              ++L+         R G+   A E + +M    + PD+    + LSAC    ++++G 
Sbjct: 834 CVVDMLT---------RAGLLSRAKEFIQEMP---IKPDALVWRTLLSACVVHKNMEIGE 881

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
               H+++++ +D      L ++Y+     +   L  +++++K V
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/654 (33%), Positives = 364/654 (55%), Gaps = 13/654 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV---IQTSILCTYGEFGCLDDARKVFD 154
           Y S+L+ C+S   + + +++H   I  G         + +S+   Y   GC   ARK+FD
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLR 213
           ++ +  + SW+++I  Y ++    + L +F  M+  G   PD  T   + +ACG+     
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
               IH   +      D  + NS + MY  CG++  A R F  + +R   SW  MI+ Y 
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++G  ++AL  F  M+    EP+  T+++VL  C+ L  L  G+ VH  +  K +G +  
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
               +L++ YA+CG M E + + + + +R+++SW  +++ Y   G ++ AL L   MQ  
Sbjct: 261 VWN-SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLA 452
            + P+  ++AS LSAC ++ SL+ G  +HG  I+   + E  V+++LIDMY+KC   NL+
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
           + +F +  ++    WN++I G   NG S +AI LF QM +  ++ ++ T  + + A + +
Sbjct: 380 FRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFL 439

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM--SERNVVSWSA 570
             L++ + +H  LI  G    I + T L D+Y+KCG L++A  +F+ +   ++++++WSA
Sbjct: 440 TDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM---R 627
           +I  YGMHG    A SLF QM+ SG+KPNE+TF +IL ACSH+G V+EG   F  M    
Sbjct: 500 IIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDN 559

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
              +  D  HY C++DLL R+G +E A+++I +M F  N ++WGALL  C IH+ +++ +
Sbjct: 560 QMSLRTD--HYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGE 617

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              K L      + G Y LL+NIY+  G W +   VR +M   GL+K P +S I
Sbjct: 618 VAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLI 671



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 190/639 (29%), Positives = 331/639 (51%), Gaps = 21/639 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPAS---TRLIESYAEMGSLRSSRLVFDTFK 56
           L + CT+ + +    ++HAH +  GL   P +    + L  +YA  G    +R +FD  +
Sbjct: 24  LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELR 83

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGE 115
            P  F W  +I+ Y  +    +++ L+ +M+   +    N+ YP V++AC        G 
Sbjct: 84  NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H R +  GFD D  +Q S++  Y   G ++ AR+VFD M  R +VSW+++I  YF N 
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
            V E L +F  M+ +G+EPD  T++S+   C  L  L   R +H  V  + +  D  + N
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-E 294
           S + MY+KCG++  A+  F +++KR   SWT M++ Y  +G  + AL    +M++ +  +
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVK 322

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           PN +TL +VL +CA L  L+ G+ +H   IR+ +  E   +  ALI+ YA+C  ++   +
Sbjct: 323 PNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEV-IVETALIDMYAKCNNVNLSFR 381

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V     ++    WN +IS     G+S++A+EL  QM    + P+  ++ S L A   +  
Sbjct: 382 VFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTD 441

Query: 415 LQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMI 471
           LQ    +HG++I+        V + LID+YSKCG    A+ +F  I  + K ++ W+++I
Sbjct: 442 LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAII 501

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI---SY 528
            G+  +G+   AI+LF QM  + ++ +E+TF + + ACS+ G +++G  +   ++     
Sbjct: 502 AGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQM 561

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHG--QLNDAA 585
            +R D Y  T + D+  + G L+ A  +  +M+ R N   W A++    +H   +L + A
Sbjct: 562 SLRTDHY--TCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVA 619

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           + +   L+ G   N V   NI  A       E  +   N
Sbjct: 620 AKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMN 658


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/710 (31%), Positives = 395/710 (55%), Gaps = 7/710 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I+ +A++ S   +  VF      +   W  +I   + N     ++ L+ +M       +
Sbjct: 188 MIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPN 247

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           +F + S+L AC++L +L  G  V G +IKCG  +D  + T+I+  Y +   +D A K F 
Sbjct: 248 SFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFL 307

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M  R+VVSW++II+ +    D       F  M + G + +  T+ S+  AC E   ++ 
Sbjct: 308 RMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKE 367

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK-RCTTSWTAMISCYN 273
           A  +H  + +    +D  + ++ I MYSK G +  +ER F ++E  +    W  MIS + 
Sbjct: 368 AVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFA 427

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +SG   +A+E F +ML+    P+     +VL     L     G+ +HC I++ G+  +  
Sbjct: 428 QSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHCYILKIGLFTDIS 484

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +G +L   Y++CG + E   V   + +++ +SW  +I+ ++    +++A++L  +M   
Sbjct: 485 -VGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLE 543

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLA 452
            + PD  ++ ++L+AC  + SL+ G ++HG+ ++    K+  V  +L++MYSKCG   LA
Sbjct: 544 EIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLA 603

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ + QK     +S++ G+ QNG   +A+ LFH++ +  L +D  T  + I A + +
Sbjct: 604 RRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAIL 663

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L+ G  +H  +   G+  ++ + ++L  MY+KCG +    +VF+ + + +++SW+AMI
Sbjct: 664 NSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMI 723

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             Y  HG+  +A  ++  M   G KP+ VTF+ +L ACSH+G VEEG  + N+M + +G+
Sbjct: 724 VSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGI 783

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           EP   HYACMVDLL RSG ++ A + I++MP   +  +WG LL  C++H  I++ +   K
Sbjct: 784 EPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAK 843

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +      + G Y  LSNI A+ G W++  K+RS+ME TG+KK PG+S++
Sbjct: 844 RVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWSSV 893



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 199/661 (30%), Positives = 335/661 (50%), Gaps = 8/661 (1%)

Query: 7   CTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           CT LR    LHAH L T  L  +   +  L+  Y +  S+  +  +FD    P+   W +
Sbjct: 59  CT-LRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNI 117

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           LI     N  FE+S   + KM       + F Y SVL AC++LG    GE V+   +K G
Sbjct: 118 LISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNG 177

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  +  ++  ++  + +    +DA +VF  +   +VV W++II+    N +    L +F 
Sbjct: 178 FFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFC 237

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M      P+  T  S+  AC  L  L   R + G V++     D  +G + I +Y+KC 
Sbjct: 238 QMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCR 297

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           D+  A + F+++  R   SWT +IS + +      A   F +M +V E+ N  T+ +VL 
Sbjct: 298 DMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLT 357

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNI 364
           +C     ++E   +H  I + G   + + +  ALI  Y++ G +   E+V   +   +N+
Sbjct: 358 ACTEPVMIKEAVQLHSWIFKTGFYLDSN-VSSALINMYSKIGVVDLSERVFREMESTKNL 416

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
             W ++IS +A+ G +  A+EL  +M   GL PD F  +S LS    + SL LG  IH +
Sbjct: 417 AMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIHCY 473

Query: 425 VIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           ++KI    D  V SSL  MYSKCG    +Y +FE++  K  V W SMI GF ++ ++ +A
Sbjct: 474 ILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQA 533

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + LF +M L  +  D++T   A+ ACS +  LEKGK VH   +   V K++ +  AL +M
Sbjct: 534 VQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNM 593

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCG +  A+RVFD + +++  S S+++  Y  +G + DA  LF ++  + +  +  T 
Sbjct: 594 YSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTV 653

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +++ A +   S++ G      +   G+  ++   + +V + S+ G I+   K+   +  
Sbjct: 654 SSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEK 713

Query: 664 P 664
           P
Sbjct: 714 P 714



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 185/359 (51%), Gaps = 3/359 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H ++L  GL  D    + L   Y++ GSL  S  VF+   + D+  WA +I  +  ++ 
Sbjct: 470 IHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDH 529

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E+++ L+ +M+ E+         + L ACS+L  L  G++VHG  ++    K+ ++  +
Sbjct: 530 AEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGA 589

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +  AR+VFD +  +D  S SS+++ Y  N  + + L +FH +    +  D
Sbjct: 590 LVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWID 649

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ S+  A   L SL     +H  V +  +  +  +G+S + MYSKCG +    + F 
Sbjct: 650 SFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFE 709

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +IEK    SWTAMI  Y + G   +AL+ +  M +   +P+ +T + VL +C+  G + E
Sbjct: 710 QIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEE 769

Query: 316 GKSVHCQIIRKGMGPEYDYLGPA-LIEFYAECGKMSECEKVIHAIG-ERNILSWNMLIS 372
           G S H   + K  G E  Y   A +++     G++ E E+ I+ +  E + L W +L++
Sbjct: 770 GYS-HLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLA 827



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 108/198 (54%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L K   +H + L   +  +      L+  Y++ G++  +R VFD   + D F  + L+ 
Sbjct: 564 SLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVS 623

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  N + E+++LL+H++      I +F   SV+ A + L  L  G ++H  + K G + 
Sbjct: 624 GYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNA 683

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  + +S++  Y + G +D+  KVF+++   D++SW+++I SY  +   +E LK++  M 
Sbjct: 684 EVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMR 743

Query: 189 REGVEPDFVTMLSLAEAC 206
           +EG +PD VT + +  AC
Sbjct: 744 KEGTKPDSVTFVGVLSAC 761


>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/680 (34%), Positives = 376/680 (55%), Gaps = 24/680 (3%)

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           WN+ +      +H   ++Q       Y S  R C++L  L   + +H   +  G   D +
Sbjct: 18  WNSLY------HHHGQKQQPPSPPTFYLS--RLCTNLPSL---KTLHASFLIHGLTNDLL 66

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + T +L  Y  FG L  ARK+F+ + +RD+  +  +I +YF N D   G+   + ++R  
Sbjct: 67  LSTKLLSLYASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLN-DTPSGVVSLYRLMRLS 125

Query: 192 VEP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           + P   D+V    + ++C E    +     H H ++  +  D  +    +  Y+K   + 
Sbjct: 126 LHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHFVK-SLPSDSFVLTCLVDAYAKFARVD 184

Query: 249 SAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            A R F +I E     SWT+MI  Y ++   ++ L  F +M E   + N  T+ +++ +C
Sbjct: 185 EATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSAC 244

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG----ERN 363
             L WL +GK VH  +I+ G+     YL  +L+  Y +CG + +  KV         +R+
Sbjct: 245 TKLNWLHQGKWVHGFVIKNGICVN-SYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRD 303

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SW  +I  Y+++G    ALEL    +  G++P+S +V+S LS+C  +G+  +G  +HG
Sbjct: 304 LVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHG 363

Query: 424 HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
             +K    D  V+++L+DMY+KCG  + A  +FE + +K VV WNS+I GF Q+G + EA
Sbjct: 364 LAVKCGLDDHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEA 423

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTD 542
           +NLF +M L     D VT +  + AC+++G L  G  VH   +  G V   IY+ TAL +
Sbjct: 424 LNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLN 483

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
            YAKCGD + A+ VFDSM E+N V+W AMI  YGM G  N + +LF+ ML+  ++PNEV 
Sbjct: 484 FYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVV 543

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F  IL ACSHSG V EG   FN M       P ++HYACMVD+L+R+G++E A   I  M
Sbjct: 544 FTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIERM 603

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   + S++GA L+GC +H R ++     K++     ++  YY L+SN+YA +G W    
Sbjct: 604 PVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGRWGMVK 663

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           +VR +++  GL KVPG S++
Sbjct: 664 QVREMIKQRGLNKVPGCSSV 683



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 188/614 (30%), Positives = 320/614 (52%), Gaps = 20/614 (3%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L R CTNL  L  LHA  L+ GL  D   ST+L+  YA  G LR +R +F+     D + 
Sbjct: 39  LSRLCTNLPSLKTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLYC 98

Query: 63  WAVLIKCYMWNNFFEESILLYHKM-IREQATISNFI-YPSVLRACSSLGDLGSGEKVHGR 120
           + V+I+ Y  N+     + LY  M +    T  +++ +  V ++C+   D  +    H  
Sbjct: 99  FKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCH 158

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSE 179
            +K     D  + T ++  Y +F  +D+A + FD++  + DVVSW+S+I +Y  N    E
Sbjct: 159 FVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCARE 217

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           GL +F+ M    V+ +  T+ SL  AC +L  L   + +HG V++  I ++  L  S + 
Sbjct: 218 GLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLN 277

Query: 240 MYSKCGDLLSAERTFVKIEK----RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           MY KCG++  A + F +       R   SWTAMI  Y++ G+   ALE F         P
Sbjct: 278 MYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILP 337

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N +T+ ++L SCA LG    GK +H   ++ G+  +   +  AL++ YA+CG +S+   V
Sbjct: 338 NSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGL--DDHPVRNALVDMYAKCGVVSDARCV 395

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
             A+ E++++SWN +IS + + G + EAL L  +M      PD+ +V   LSAC ++G L
Sbjct: 396 FEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGML 455

Query: 416 QLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
            LG  +HG  +K  +     +V ++L++ Y+KCG    A ++F+ + +K+ V W +MI G
Sbjct: 456 HLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGG 515

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL---ISYGV 530
           +   G+   ++ LF  M    +E +EV F T + ACS+ G + +G  + + +   +++  
Sbjct: 516 YGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCGELNFVP 575

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFK 589
               Y    + DM A+ G+L+ A    + M  +  VS + A +   G+H +     +  K
Sbjct: 576 SMKHY--ACMVDMLARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIK 633

Query: 590 QMLDSGIKPNEVTF 603
           +ML+  + P+E  +
Sbjct: 634 KMLE--LHPDEACY 645


>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 232/735 (31%), Positives = 398/735 (54%), Gaps = 25/735 (3%)

Query: 29  PPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR 88
           P   +RL +   E G+ + +R +FD   +P + +W  +I  ++ NN   E++L Y +M +
Sbjct: 40  PSIRSRLSKICQE-GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM-K 97

Query: 89  EQATISN---FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY----- 140
           + A  +    + Y S L+AC+   +L +G+ VH  +I+C  +   V+  S++  Y     
Sbjct: 98  KTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157

Query: 141 ---GEFGCL--DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
               E  C   D  RKVFD M  ++VV+W+++I+ Y      +E  + F  M+R  ++P 
Sbjct: 158 APGSELDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPS 217

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            V+ +++  A     S++ A   +G +L+   +   D  + +S I MY++ GDL S+ R 
Sbjct: 218 PVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRV 277

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGW 312
           F    +R    W  MI  Y ++    +++E F++ +  KE   + +T +    + +GL  
Sbjct: 278 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQ 337

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  G+  H   + K        +  +L+  Y+ CG + +   V H++ ER+++SWN +IS
Sbjct: 338 VELGRQFH-GFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMIS 396

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            + + G+  E L L+ +MQ  G   D  +V + LSA  N+ + ++G Q HG +I+   + 
Sbjct: 397 AFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQF 456

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           E + S LIDMY+K G   ++  LFE     ++    WNSMI G+ QNG++ E   +F +M
Sbjct: 457 EGMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKM 516

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               +  + VT  + + ACS +G ++ GK +H   I   + +++++ +AL DMY+K G +
Sbjct: 517 LEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAI 576

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           + A+ +F    ERN V+++ MI  YG HG    A SLF  M + GIKP+ + F+ +L AC
Sbjct: 577 KYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSAC 636

Query: 611 SHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GS 668
           S+SG V+EG   F  MR ++ ++P  +HY C+ D+L R G +  A++ +  +    N   
Sbjct: 637 SYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAE 696

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSV--TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
           +WG+LL  CR+H  +++ +T+ + L+    G N +GY  LLSN+YAEE NW    +VR  
Sbjct: 697 LWGSLLGSCRLHGELELAETVSERLAKLDKGKNFSGYEVLLSNMYAEEQNWKSVDRVRKG 756

Query: 727 MEVTGLKKVPGYSTI 741
           M   GLKK  G S I
Sbjct: 757 MREKGLKKEVGRSGI 771


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/735 (31%), Positives = 386/735 (52%), Gaps = 39/735 (5%)

Query: 16   LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            +H + +  G   D   S  L+  Y + G +  +RL+FD   E D+ +W V++K Y+ N+F
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 76   FEESILLYHKMIREQATISNFIYPSVLRACSSLG----DLGSGEKVHGRIIKCGFDKDDV 131
             +E++  +    R     S F +P        +G    D+ +  K H   +K        
Sbjct: 799  QDEALRFFSAFHR-----SGF-FPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY------ 846

Query: 132  IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
                             A K+F      ++ +W+  +  +     +   +  F +++R  
Sbjct: 847  -----------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 192  VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            +  D VT++ +  A      L     IH  V++       P+ NS + MYSK G + +AE
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 252  RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
            +TF+   +    SW  MIS Y ++    +A+ +F  +L    +P+  TL +VL +C+   
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD 1009

Query: 312  ---WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               +   G  VH   I+ G+  +  ++  ALI+ Y++ GKM E E ++H   + ++ SWN
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIIND-SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWN 1068

Query: 369  MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
             ++  Y +   S++ALE    M   G+  D  ++A+++ A G + +L+ G QI  + IK+
Sbjct: 1069 AIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKL 1128

Query: 429  DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               ++  V S ++DMY KCG    A  LF  I +   V W +MI G+ +NG+   A++++
Sbjct: 1129 GFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY 1188

Query: 488  HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            H M ++ ++ DE TF T I+A S +  LE+GK +H  ++      D ++ T+L DMY KC
Sbjct: 1189 HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248

Query: 548  GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            G +Q A RVF  M  R VV W+AM+     HG +++A +LF+ M  +GI+P++VTF+ +L
Sbjct: 1249 GSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308

Query: 608  WACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
             ACSHSG   E   YF+AM + +G+ P+++HY+C+VD L R+G I+ A  +I SMPF A+
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKAS 1368

Query: 667  GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
             S++ ALL  CR     +  K +  +L     +D+  Y LLSNIYA    WD+    R++
Sbjct: 1369 ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNM 1428

Query: 727  MEVTGLKKVPGYSTI 741
            M++  +KK PG+S I
Sbjct: 1429 MKLKNVKKDPGFSWI 1443



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 188/704 (26%), Positives = 333/704 (47%), Gaps = 46/704 (6%)

Query: 8    TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
             +L+   R HA ++ +G   D   +  LI  Y++ GSL S+R VFD   + D   W  ++
Sbjct: 625  ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684

Query: 68   KCYM------WNNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGR 120
              Y       + N  E   L    ++RE   +I+      +L+ C   G +   E VHG 
Sbjct: 685  AAYAQFADSSYENVLEGFRLF--GLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 121  IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
             +K GF+ D  +  +++  Y ++G +  AR +FDKM  RD V W+ ++ +Y +N+   E 
Sbjct: 743  AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 181  LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            L+ F +  R G  PDF  +  +    G    +   R  H   ++                
Sbjct: 803  LRFFSAFHRSGFFPDFSNLHCV--IGGVNSDVSNNRKRHAEQVK---------------- 844

Query: 241  YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
                     A + F   +     +W   ++ +  +G    A++ F  +L      + +TL
Sbjct: 845  -------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897

Query: 301  ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            + +L +  G   L  G+ +H  +I+    P    +  +L+  Y++ G +   EK      
Sbjct: 898  VIILSAAVGADDLDLGEQIHALVIKSSFAPVVP-VSNSLMNMYSKAGVVYAAEKTFINSP 956

Query: 361  ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC--GNVGS-LQL 417
            E +++SWN +IS YA+  +  EA+     +   GL PD F++AS L AC  G+ G    L
Sbjct: 957  ELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTL 1016

Query: 418  GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G Q+H + IK     D FV ++LID+YSK G  + A  L        +  WN+++ G+ +
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076

Query: 477  NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            +  S +A+  F  M+   + +DE+T  TAI+A   +  L++GK +    I  G   D+++
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136

Query: 537  DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             + + DMY KCGD+  A  +F  +S  + V+W+ MI  Y  +G  + A S++  M  SG+
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196

Query: 597  KPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHY--ACMVDLLSRSGDIEG 653
            +P+E TF  ++ A S   ++E+GK  + N +++   +  L H+    +VD+  + G ++ 
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKL---DYSLDHFVGTSLVDMYCKCGSVQD 1253

Query: 654  AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
            A+++   M        W A+L G   H  +D    + + +   G
Sbjct: 1254 AYRVFRKMDV-RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG 1296



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 150/610 (24%), Positives = 273/610 (44%), Gaps = 36/610 (5%)

Query: 103  RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVV 162
            R+  ++ DL  G++ H RI+  G   D  +  +++  Y + G L  AR+VFDK + RD+V
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 163  SWSSIIASYFDNADVS-----EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            +W+SI+A+Y   AD S     EG ++F  +   G     +T+  L + C     ++ + +
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 218  IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
            +HG+ ++   ++D  +  + + +Y K G +  A   F K+ +R    W  M+  Y  + +
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 278  FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
              +AL  F         P+   L  V+G       +   +  H + ++            
Sbjct: 799  QDEALRFFSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVK----------AY 846

Query: 338  ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            A+  F  + G               NI +WN  ++E+   G    A++    +    +  
Sbjct: 847  AMKMFPFDQGS--------------NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGH 892

Query: 398  DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
            DS ++   LSA      L LG QIH  VIK        V +SL++MYSK G    A   F
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 457  ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
                +  ++ WN+MI  + QN   +EAI  F  +  + L+ D+ T  + ++ACS   + E
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012

Query: 517  K---GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
                G  VH   I  G+  D ++ TAL D+Y+K G +  A+ +     + ++ SW+A++ 
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 574  CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
             Y    +   A   F  M + GI  +E+T    + A     ++++GK         G   
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132

Query: 634  DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            DL   + ++D+  + GD+  A ++   +  P +   W  +++G   +   D   ++   +
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRP-DEVAWTTMISGYIENGDEDHALSVYHLM 1191

Query: 694  SVTGTNDNGY 703
             V+G   + Y
Sbjct: 1192 RVSGVQPDEY 1201



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 169/347 (48%), Gaps = 2/347 (0%)

Query: 14   TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            +++H + +  G+  D   ST LI+ Y++ G +  +  +     + D   W  ++  Y+ +
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077

Query: 74   NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            N   +++  +  M      I      + ++A   L +L  G+++    IK GF+ D  + 
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS 1137

Query: 134  TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            + +L  Y + G + +A ++F +++  D V+W+++I+ Y +N D    L ++H M   GV+
Sbjct: 1138 SGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQ 1197

Query: 194  PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            PD  T  +L +A   L +L   + IH +V++    +D  +G S + MY KCG +  A R 
Sbjct: 1198 PDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRV 1257

Query: 254  FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
            F K++ R    W AM+    + G   +AL  F  M     +P+ +T I VL +C+  G  
Sbjct: 1258 FRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317

Query: 314  REG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             E  K         G+ PE ++    L++     G++ E E VI ++
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYS-CLVDALGRAGRIQEAENVIASM 1363



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 103/198 (52%)

Query: 9    NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
            NL++  ++ A+ +  G + D   S+ +++ Y + G + ++  +F     PD   W  +I 
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173

Query: 69   CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             Y+ N   + ++ +YH M         + + ++++A S L  L  G+++H  ++K  +  
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 129  DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
            D  + TS++  Y + G + DA +VF KM  R VV W++++     +  V E L +F +M 
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 189  REGVEPDFVTMLSLAEAC 206
              G++PD VT + +  AC
Sbjct: 1294 SNGIQPDKVTFIGVLSAC 1311


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 240/749 (32%), Positives = 391/749 (52%), Gaps = 45/749 (6%)

Query: 3    LFRSCTNLRKL---TRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
            L + C   R L    ++HA +L  G  +  +    T+L+  YA+      +  +F   + 
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 1239

Query: 58   PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             + F WA ++       F E+++L + +M        NF+ P+VL+AC SL  +G G+ V
Sbjct: 1240 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 1299

Query: 118  HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
            HG ++K GF     + +S++  YG+ G L+DARKVFD M  ++VV+W+S+I  Y  N   
Sbjct: 1300 HGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLN 1359

Query: 178  SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
             E + +F+ M  EG+EP  VT+ S   A   L +L   +  H   +   + +D  LG+S 
Sbjct: 1360 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 1419

Query: 238  IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
            I  YSK G +  AE  F ++ ++   +W  +IS Y +     KAL     M  +    NL
Sbjct: 1420 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKAL----NMCHLMRSENL 1475

Query: 298  ----ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
                +TL ++L + A    ++ GK  HC  IR+ +  +   +  ++I+ YA+C ++ +  
Sbjct: 1476 RFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDV-VVANSIIDMYAKCERIDDAR 1534

Query: 354  KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            KV  +  ER+++ WN L++ YA+ G+S EAL+L  QMQ   + P+  S  S +       
Sbjct: 1535 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI------- 1587

Query: 414  SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
               LG   +G V   + KD F Q          GF            Q +++ W ++I G
Sbjct: 1588 ---LGFLRNGQVN--EAKDMFSQ------MQSLGF------------QPNLITWTTLISG 1624

Query: 474  FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
              Q+G   EAI  F +M    +     +  + + AC++I  L  G+ +H  +  +     
Sbjct: 1625 LAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLS 1684

Query: 534  IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            + + T+L DMYAKCG +  A++VF  MS + +  ++AMI  Y +HGQ  +A +LFK +  
Sbjct: 1685 VPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQK 1744

Query: 594  SGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
             GI+P+ +TF +IL ACSH+G V EG   + + +    + P ++HY C+V LLSR G+++
Sbjct: 1745 EGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLD 1804

Query: 653  GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
             A ++I +MPF  +  I G+LL  CR H  I++ + + K L     +++G Y  LSN YA
Sbjct: 1805 EALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYA 1864

Query: 713  EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              G W E   +R +M+V GL+K PG S I
Sbjct: 1865 AAGRWVEVSNMRDLMKVRGLRKNPGCSWI 1893


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/731 (31%), Positives = 384/731 (52%), Gaps = 31/731 (4%)

Query: 16   LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            +H + +  G   D   S  L+  Y + G +  +RL+FD   E D+ +W V++K Y+ N+F
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 76   FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             +E++  +    R            V+   +S  D+ +  K H   +K            
Sbjct: 799  QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNS--DVSNNRKRHAEQVKAY---------- 846

Query: 136  ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
                         A K+F      ++ +W+  +  +     +   +  F +++R  +  D
Sbjct: 847  -------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893

Query: 196  FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             VT++ +  A      L     IH  V++       P+ NS + MYSK G + +AE+TF+
Sbjct: 894  SVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFI 953

Query: 256  KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG---W 312
               +    SW  MIS Y ++    +A+ +F  +L    +P+  TL +VL +C+      +
Sbjct: 954  NSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEY 1013

Query: 313  LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
               G  VH   I+ G+  +  ++  ALI+ Y++ GKM E E ++H   + ++ SWN ++ 
Sbjct: 1014 FTLGSQVHVYAIKCGIIND-SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 373  EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
             Y +   S++ALE    M   G+  D  ++A+++ A G + +L+ G QI  + IK+   +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132

Query: 433  EF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
            +  V S ++DMY KCG    A  LF  I +   V W +MI G+ +NG+   A++++H M 
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192

Query: 492  LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            ++ ++ DE TF T I+A S +  LE+GK +H  ++      D ++ T+L DMY KCG +Q
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252

Query: 552  TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
             A RVF  M  R VV W+AM+     HG +++A +LF+ M  +GI+P++VTF+ +L ACS
Sbjct: 1253 DAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312

Query: 612  HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
            HSG   E   YF+AM + +G+ P+++HY+C+VD L R+G I+ A  +I SMPF A+ S++
Sbjct: 1313 HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMY 1372

Query: 671  GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             ALL  CR     +  K +  +L     +D+  Y LLSNIYA    WD+    R++M++ 
Sbjct: 1373 RALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLK 1432

Query: 731  GLKKVPGYSTI 741
             +KK PG+S I
Sbjct: 1433 NVKKDPGFSWI 1443



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 187/691 (27%), Positives = 329/691 (47%), Gaps = 46/691 (6%)

Query: 8    TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
             +L+   R HA ++ +G   D   +  LI  Y++ GSL S+R VFD   + D   W  ++
Sbjct: 625  ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684

Query: 68   KCYM------WNNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGR 120
              Y       + N  E   L    ++RE   +I+      +L+ C   G +   E VHG 
Sbjct: 685  AAYAQFADSSYENVLEGFRLF--GLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 121  IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
             +K GF+ D  +  +++  Y ++G +  AR +FDKM  RD V W+ ++ +Y +N+   E 
Sbjct: 743  AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 181  LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            L+ F +  R G  PDF  +  +    G    +   R  H   ++                
Sbjct: 803  LRFFSAFHRSGFXPDFSNLHCV--IGGVNSDVSNNRKRHAEQVK---------------- 844

Query: 241  YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
                     A + F   +     +W   ++ +  +G    A++ F  +L      + +TL
Sbjct: 845  -------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897

Query: 301  ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            + +L +  G   L  G+ +H  +I+    P    +  +L+  Y++ G +   EK      
Sbjct: 898  VIILSAAVGADDLDLGEQIHALVIKSSFAPVVP-VSNSLMNMYSKAGVVYAAEKTFINSP 956

Query: 361  ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC--GNVGS-LQL 417
            E +++SWN +IS YA+  +  EA+     +   GL PD F++AS L AC  G+ G    L
Sbjct: 957  ELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTL 1016

Query: 418  GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G Q+H + IK     D FV ++LID+YSK G  + A  L        +  WN+++ G+ +
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076

Query: 477  NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            +  S +A+  F  M+   + +DE+T  TAI+A   +  L++GK +    I  G   D+++
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136

Query: 537  DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             + + DMY KCGD+  A  +F  +S  + V+W+ MI  Y  +G  + A S++  M  SG+
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196

Query: 597  KPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHY--ACMVDLLSRSGDIEG 653
            +P+E TF  ++ A S   ++E+GK  + N +++   +  L H+    +VD+  + G ++ 
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKL---DYSLDHFVGTSLVDMYCKCGSVQD 1253

Query: 654  AFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
            A+++   M        W A+L G   H  +D
Sbjct: 1254 AYRVFRKMDV-RKVVFWNAMLLGLAQHGHVD 1283



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 150/610 (24%), Positives = 273/610 (44%), Gaps = 36/610 (5%)

Query: 103  RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVV 162
            R+  ++ DL  G++ H RI+  G   D  +  +++  Y + G L  AR+VFDK + RD+V
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 163  SWSSIIASYFDNADVS-----EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            +W+SI+A+Y   AD S     EG ++F  +   G     +T+  L + C     ++ + +
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 218  IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
            +HG+ ++   ++D  +  + + +Y K G +  A   F K+ +R    W  M+  Y  + +
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 278  FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
              +AL  F         P+   L  V+G       +   +  H + ++            
Sbjct: 799  QDEALRFFSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVK----------AY 846

Query: 338  ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            A+  F  + G               NI +WN  ++E+   G    A++    +    +  
Sbjct: 847  AMKMFPFDQGS--------------NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGH 892

Query: 398  DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
            DS ++   LSA      L LG QIH  VIK        V +SL++MYSK G    A   F
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 457  ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
                +  ++ WN+MI  + QN   +EAI  F  +  + L+ D+ T  + ++ACS   + E
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012

Query: 517  K---GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
                G  VH   I  G+  D ++ TAL D+Y+K G +  A+ +     + ++ SW+A++ 
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 574  CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
             Y    +   A   F  M + GI  +E+T    + A     ++++GK         G   
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132

Query: 634  DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            DL   + ++D+  + GD+  A ++   +  P +   W  +++G   +   D   ++   +
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRP-DEVAWTTMISGYIENGDEDHALSVYHLM 1191

Query: 694  SVTGTNDNGY 703
             V+G   + Y
Sbjct: 1192 RVSGVQPDEY 1201



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 169/347 (48%), Gaps = 2/347 (0%)

Query: 14   TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            +++H + +  G+  D   ST LI+ Y++ G +  +  +     + D   W  ++  Y+ +
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077

Query: 74   NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            N   +++  +  M      I      + ++A   L +L  G+++    IK GF+ D  + 
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS 1137

Query: 134  TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            + +L  Y + G + +A ++F +++  D V+W+++I+ Y +N D    L ++H M   GV+
Sbjct: 1138 SGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQ 1197

Query: 194  PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            PD  T  +L +A   L +L   + IH +V++    +D  +G S + MY KCG +  A R 
Sbjct: 1198 PDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRV 1257

Query: 254  FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
            F K++ R    W AM+    + G   +AL  F  M     +P+ +T I VL +C+  G  
Sbjct: 1258 FRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317

Query: 314  REG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             E  K         G+ PE ++    L++     G++ E E VI ++
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYS-CLVDALGRAGRIQEAENVIASM 1363



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 103/198 (52%)

Query: 9    NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
            NL++  ++ A+ +  G + D   S+ +++ Y + G + ++  +F     PD   W  +I 
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173

Query: 69   CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             Y+ N   + ++ +YH M         + + ++++A S L  L  G+++H  ++K  +  
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 129  DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
            D  + TS++  Y + G + DA +VF KM  R VV W++++     +  V E L +F +M 
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 189  REGVEPDFVTMLSLAEAC 206
              G++PD VT + +  AC
Sbjct: 1294 SNGIQPDKVTFIGVLSAC 1311


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/647 (32%), Positives = 348/647 (53%), Gaps = 3/647 (0%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           I +  Y  + + C+ L D   G++V   II+ G   +     +++  Y   G + +AR++
Sbjct: 55  IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD + ++ VV+W+++IA Y     V E   +F  MV EG+EP  +T LS+ +AC     L
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
              + +H  V+      D  +G + + MY K G +  A + F  +  R  +++  M+  Y
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            +SG ++KA E F +M +V  +PN I+ +++L  C     L  GK+VH Q +  G+  + 
Sbjct: 235 AKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDI 294

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             +  +LI  Y  CG +    +V   +  R+++SW ++I  YA  G  ++A  L   MQ 
Sbjct: 295 R-VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNL 451
            G+ PD  +    ++AC    +L    +IH  V I     D  V ++L+ MY+KCG    
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD 413

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F+ + ++ VV W++MI  + +NG   EA   FH M  + +E D VT++  + AC +
Sbjct: 414 ARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGH 473

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G L+ G  ++ + I   +   + +  AL  M AK G ++ A+ +FD+M  R+V++W+AM
Sbjct: 474 LGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAM 533

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN-AMRIFG 630
           I  Y +HG   +A  LF +ML    +PN VTF+ +L ACS +G V+EG+ +F   +   G
Sbjct: 534 IGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRG 593

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           + P ++ Y CMVDLL R+G+++ A  +I SMP     SIW +LL  CRIH  +DV +   
Sbjct: 594 IVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAA 653

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           +   +    D   Y  LS++YA  G W+   KVR +ME  G++K  G
Sbjct: 654 ERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQG 700



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 307/590 (52%), Gaps = 7/590 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + LF+ CT LR      ++  H++  G   +      LI+ Y+  G++  +R +FD+ + 
Sbjct: 61  VKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVEN 120

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W  LI  Y      +E+  L+ +M+ E    S   + SVL ACSS   L  G++V
Sbjct: 121 KTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEV 180

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H +++  GF  D  I T+++  Y + G +DDAR+VFD +  RDV +++ ++  Y  + D 
Sbjct: 181 HAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDW 240

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            +  ++F+ M + G++P+ ++ LS+ + C    +L   +++H   +   +  D  +  S 
Sbjct: 241 EKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSL 300

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MY+ CG +  A R F  ++ R   SWT MI  Y  +G  + A   F  M E   +P+ 
Sbjct: 301 IRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDR 360

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           IT + ++ +CA    L   + +H Q+   G G +   +  AL+  YA+CG + +  +V  
Sbjct: 361 ITYMHIMNACAISANLNHAREIHSQVDIAGFGTDL-LVSTALVHMYAKCGAIKDARQVFD 419

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           A+  R+++SW+ +I  Y   G   EA E    M+   + PD  +  + L+ACG++G+L +
Sbjct: 420 AMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDV 479

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G++I+   IK D      + ++LI M +K G    A  +F+ + ++ V+ WN+MI G+  
Sbjct: 480 GMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSL 539

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIY 535
           +GN+ EA+ LF +M       + VTF+  + ACS  G +++G ++  + L   G+   + 
Sbjct: 540 HGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVK 599

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDA 584
           +   + D+  + G+L  A+ +  SM  +   S WS+++    +HG L+ A
Sbjct: 600 LYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVA 649



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 253/524 (48%), Gaps = 11/524 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA ++  G   D    T L+  Y + GS+  +R VFD     D   + V++  Y  +  
Sbjct: 180 VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGD 239

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           +E++  L+++M +     +   + S+L  C +   L  G+ VH + +  G   D  + TS
Sbjct: 240 WEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATS 299

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y   G ++ AR+VFD M  RDVVSW+ +I  Y +N ++ +   +F +M  EG++PD
Sbjct: 300 LIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPD 359

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T + +  AC    +L  AR IH  V       D  +  + + MY+KCG +  A + F 
Sbjct: 360 RITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFD 419

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +R   SW+AMI  Y  +G+  +A E+F  M     EP+ +T I +L +C  LG L  
Sbjct: 420 AMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDV 479

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  ++ Q I+  +   +  LG ALI   A+ G +     +   +  R++++WN +I  Y+
Sbjct: 480 GMEIYTQAIKADL-VSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYS 538

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
             G ++EAL L  +M      P+S +    LSAC   G +  G +   ++++       V
Sbjct: 539 LHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTV 598

Query: 436 Q--SSLIDMYSKCGFKNLAYLLFERIQQKSV-VMWNSMICGFYQNGNSLEAINLFHQMYL 492
           +    ++D+  + G  + A LL + +  K    +W+S++     +GN    +++  +   
Sbjct: 599 KLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGN----LDVAERAAE 654

Query: 493 NCLEMDEVTFLTAIQAC---SNIGQLEKGKWVHHKLISYGVRKD 533
            CL +D       +Q     +  G  E    V   + S G+RK+
Sbjct: 655 RCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKE 698


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/663 (31%), Positives = 356/663 (53%), Gaps = 13/663 (1%)

Query: 82  LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-----FDKDDVIQTSI 136
           + H++      I +  Y  + + C  L D G G++V   II+ G     ++ + +I+   
Sbjct: 48  VLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +C     G + +AR+ FD + ++ VV+W++IIA Y     V E   +F  MV E +EP  
Sbjct: 108 IC-----GNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSI 162

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           +T L + +AC     L+  +  H  V++     D  +G + + MY K G +  A + F  
Sbjct: 163 ITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDG 222

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           + KR  +++  MI  Y +SG  +KA + F +M +   +PN I+ +++L  C+    L  G
Sbjct: 223 LYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWG 282

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K+VH Q +  G+  +   +  ALI  Y  CG +    +V   +  R+++SW ++I  YA 
Sbjct: 283 KAVHAQCMNTGLVDDVR-VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAE 341

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFV 435
               ++A  L   MQ  G+ PD  +    ++AC +   L L  +IH  V++     D  V
Sbjct: 342 NSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLV 401

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            ++L+ MY+KCG    A  +F+ + ++ VV W++MI  + +NG   EA   FH M  N +
Sbjct: 402 DTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV 461

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           E D VT++  + AC ++G L+ G  ++ + I   +   I +  AL +M  K G ++ A+ 
Sbjct: 462 EPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARY 521

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +F++M +R+VV+W+ MI  Y +HG   +A  LF +ML    +PN VTF+ +L ACS +G 
Sbjct: 522 IFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGF 581

Query: 616 VEEGKFYFN-AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           VEEG+ +F+  +   G+ P ++ Y CMVDLL R+G+++ A  +I+ MP   N SIW  LL
Sbjct: 582 VEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLL 641

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CRI+  +DV +   +   ++   D   Y  LS++YA  G W+   KVR +ME  G++K
Sbjct: 642 AACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRK 701

Query: 735 VPG 737
             G
Sbjct: 702 EQG 704



 Score =  294 bits (753), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 172/590 (29%), Positives = 305/590 (51%), Gaps = 7/590 (1%)

Query: 1   MPLFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + LF+ C  LR      ++  H++ +G   +      LI+ ++  G++  +R  FD+ + 
Sbjct: 65  VKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVEN 124

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W  +I  Y      +E+  L+ +M+ E    S   +  VL ACSS   L  G++ 
Sbjct: 125 KTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEF 184

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H ++IK GF  D  I T+++  Y + G +D AR+VFD +  RDV +++ +I  Y  + D 
Sbjct: 185 HAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDG 244

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            +  ++F+ M +EG +P+ ++ LS+ + C    +L   +++H   +   +  D  +  + 
Sbjct: 245 EKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATAL 304

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MY  CG +  A R F K++ R   SWT MI  Y  +   + A   F  M E   +P+ 
Sbjct: 305 IRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDR 364

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           IT I ++ +CA    L   + +H Q++R G G +   +  AL+  YA+CG + +  +V  
Sbjct: 365 ITYIHIINACASSADLSLAREIHSQVVRAGFGTDL-LVDTALVHMYAKCGAIKDARQVFD 423

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           A+  R+++SW+ +I  Y   G  +EA E    M+   + PD  +  + L+ACG++G+L L
Sbjct: 424 AMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDL 483

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G++I+   IK D      V ++LI+M  K G    A  +FE + Q+ VV WN MI G+  
Sbjct: 484 GMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSL 543

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIY 535
           +GN+ EA++LF +M       + VTF+  + ACS  G +E+G ++  + L   G+   + 
Sbjct: 544 HGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTME 603

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDA 584
           +   + D+  + G+L  A+ + + M  + N   WS ++    ++G L+ A
Sbjct: 604 LYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVA 653



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 261/533 (48%), Gaps = 9/533 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S   L+     HA ++  G   D    T L+  Y + GS+  +R VFD   + D   + V
Sbjct: 174 SPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNV 233

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y  +   E++  L+++M +E    +   + S+L  CS+   L  G+ VH + +  G
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTG 293

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
              D  + T+++  Y   G ++ AR+VFDKM  RDVVSW+ +I  Y +N+++ +   +F 
Sbjct: 294 LVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFA 353

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           +M  EG++PD +T + +  AC     L  AR IH  V+R     D  +  + + MY+KCG
Sbjct: 354 TMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCG 413

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            +  A + F  + +R   SW+AMI  Y  +G  ++A E+F  M     EP+++T I +L 
Sbjct: 414 AIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLN 473

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +C  LG L  G  ++ Q I+  +   +  +G ALI    + G +     +   + +R+++
Sbjct: 474 ACGHLGALDLGMEIYTQAIKADL-VSHIPVGNALINMNVKHGSIERARYIFENMVQRDVV 532

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           +WN++I  Y+  G ++EAL+L  +M      P+S +    LSAC   G ++ G +   ++
Sbjct: 533 TWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYL 592

Query: 426 I--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQNGNS 480
           +  +       +   ++D+  + G  + A LL  R+  K +  +W++++  C  Y N   
Sbjct: 593 LDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGN--- 649

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           L+      +  L     D   ++      +  G  E    V   + S GVRK+
Sbjct: 650 LDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKE 702



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 45/275 (16%)

Query: 472 CGFYQN-----------GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           CGF Q               + A ++ H++      +D  T++   Q C  +     GK 
Sbjct: 23  CGFLQQPVQSARCRSIFTGQVGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQ 82

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           V   +I  G + +IY    L  +++ CG++  A++ FDS+  + VV+W+A+I  Y   G 
Sbjct: 83  VRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGH 142

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGV-------- 631
           + +A +LF+QM+D  ++P+ +TF+ +L ACS    ++ GK F+   +++  V        
Sbjct: 143 VKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTA 202

Query: 632 ----------------------EPDLQHYACMVDLLSRSGDIEGAFKMIHSMP---FPAN 666
                                 + D+  +  M+   ++SGD E AF++ + M    F  N
Sbjct: 203 LVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPN 262

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
              + ++L+GC   + +   K +  +   TG  D+
Sbjct: 263 RISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/650 (34%), Positives = 353/650 (54%), Gaps = 12/650 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRII--KCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMT 157
           +LR   S G L S   +H R++    G     +  +T +L  Y   G L  AR VFD   
Sbjct: 65  LLRLLPSCGTLLSLRVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTP 124

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP----DFVTMLSLAEACGELCSLR 213
             D  S+ +++         ++ + + H M R    P    DFV  L+L +AC       
Sbjct: 125 RPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLAL-KACIRSAEYS 183

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             RS+H   ++     DG + NS + MY+K  DL  A + F +I  R   SWT+MIS   
Sbjct: 184 YGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCV 242

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++G+    L  F KM +    P+  T+ TV+ +C+ L  L +G+ +H  +I++G+     
Sbjct: 243 QNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSN-S 301

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++  AL++ Y +CG++     V   +   +++ W  +I  Y + G   +AL L +  +  
Sbjct: 302 FISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFA 361

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLA 452
            + P+S + A+ LSA   +  L LG  IHG  +K+   +   V ++L+DMY+KC   + A
Sbjct: 362 NIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEA 421

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F RI  K VV WNSMI G+ +N    +A+ LF QM L     D ++ + A+ A   +
Sbjct: 422 DRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCL 481

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G L  GK +H   + +    +IY+DTAL ++Y KCGDL +A+RVFD M++RN V+W AMI
Sbjct: 482 GDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMI 541

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             YGM G    +  LF +ML  G+ PN++ F +IL  CSHSG V  GK YF++M + F +
Sbjct: 542 GGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNI 601

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            P ++HYACMVD+L+R+G++E A + I +MP  A+ S+WGA L+GC +H R+   +   K
Sbjct: 602 TPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIK 661

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + V        Y L+SN+Y   G WD+   +R  M+  GL K+PG S++
Sbjct: 662 RMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 181/599 (30%), Positives = 311/599 (51%), Gaps = 11/599 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLV--TGLHYDP-PASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  SC  L  L  LHA LL    GL      A T+L+  YA +G L S+R+VFD    PD
Sbjct: 68  LLPSCGTLLSLRVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPD 127

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQA---TISNFIYPSVLRACSSLGDLGSGEK 116
           ++ +  ++ C +      +++ L+H M R +       +F+    L+AC    +   G  
Sbjct: 128 AYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRS 187

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H   IK G   D  +  S++  Y +   L+ ARKVF+++  R+VVSW+S+I+    N  
Sbjct: 188 LHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGF 246

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            S+GL +F+ M ++ V P   T+ ++  AC  L  L   R +HG V+++ +  +  +  +
Sbjct: 247 ASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAA 306

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY KCG+L  A   F ++       WT MI  Y ++G    AL  F+        PN
Sbjct: 307 LLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPN 366

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T  TVL + A L  L  GKS+H   ++ G+  EY+ +G AL++ YA+C  +SE +++ 
Sbjct: 367 SVTTATVLSASAQLRDLSLGKSIHGLAVKLGL-VEYNVVGNALVDMYAKCQAVSEADRIF 425

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             I  +++++WN +IS YA   M  +AL L  QM   G  PD+ SV ++LSA   +G L 
Sbjct: 426 GRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLL 485

Query: 417 LGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           +G  IHG+ +K     + +V ++L+++Y+KCG    A  +F+ +  ++ V W +MI G+ 
Sbjct: 486 IGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYG 545

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
             G+S  +I+LF +M  + +  +++ F + +  CS+ G +  GK     +   + +   +
Sbjct: 546 MQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSM 605

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
                + D+ A+ G+L+ A    D+M  + +   W A +    +H +L  A    K+M+
Sbjct: 606 KHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMM 664


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/650 (34%), Positives = 363/650 (55%), Gaps = 8/650 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVH--GRIIKCGFDK-DDVIQTSILCTYGEFGCLDDARKVFD 154
           Y +VL+ CS +  L  G++ H   R    G D  D+V+   ++  Y + G L++AR+VFD
Sbjct: 94  YGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFD 153

Query: 155 KMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           +M    DV  W+++++ Y    D+ EG+ +F  M   GV PD  T+  + +    L S+ 
Sbjct: 154 EMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIE 213

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
               +HG + +        +GN+ +  Y+K      A   F  +  R   SW +MIS   
Sbjct: 214 DGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCT 273

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
            +G + KA+E FV+M    EE +  TL++VL +CA L  L  G+ VH   ++ G   +  
Sbjct: 274 SNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTS 333

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            L   L++ Y+ C       K+   + ++N++SW  +I+ Y R G+  +   L  +M   
Sbjct: 334 -LANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLE 392

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
           G  PD F++ S+L A      L+ G  +HG+ I+   +    V ++L++MY KCG    A
Sbjct: 393 GTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEA 452

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
            L+F+ +  K ++ WN++I G+ +N  + EA +LF +M L  L  + VT    + A +++
Sbjct: 453 KLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASL 511

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             LE+G+ +H   +  G  +D ++  AL DMY KCG L  A+R+FD +S +N++SW+ M+
Sbjct: 512 SSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMV 571

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGV 631
             YGMHG+  DA +LF+QM  SGI P+  +F  IL+ACSHSG  +EG  +F+AMR    +
Sbjct: 572 AGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKI 631

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           EP L+HY CMVDLL  +G+++ A++ I SMP   + SIW +LL GCRIH+ + + + + +
Sbjct: 632 EPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAE 691

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +      + GYY LL+NIYAE   W+   K+++ +   GL++  G S I
Sbjct: 692 RVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWI 741



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 181/615 (29%), Positives = 305/615 (49%), Gaps = 22/615 (3%)

Query: 7   CTNLRKLTR-LHAHLLVTGLHY-----DPPASTRLIESYAEMGSLRSSRLVFDTFKE-PD 59
           C+ +R L     AH LV          D     +L+  Y + G L ++R VFD   +  D
Sbjct: 101 CSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSD 160

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKM----IREQATISNFIYPSVLRACSSLGDLGSGE 115
             +W  L+  Y       E +LL+ KM    +R  A    +    VL+  + LG +  GE
Sbjct: 161 VRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDA----YTISCVLKCIAGLGSIEDGE 216

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            VHG + K GF     +  +++  Y +     DA  VFD M  RDV+SW+S+I+    N 
Sbjct: 217 VVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNG 276

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              + +++F  M  EG E D  T+LS+  AC EL  L   R +HG+ ++        L N
Sbjct: 277 LYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLAN 336

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MYS C D  S  + F  + ++   SWTAMI+ Y R+G + K    F +M      P
Sbjct: 337 VLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRP 396

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           ++  + + L + AG   L+ GKSVH   IR GM  +   +  AL+E Y +CG M E + +
Sbjct: 397 DIFAITSALHAFAGNELLKHGKSVHGYAIRNGM-EKVLAVTNALMEMYVKCGNMEEAKLI 455

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  ++++SWN LI  Y+R  ++ EA  L  +M    L P++ ++   L A  ++ SL
Sbjct: 456 FDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM-LLQLRPNAVTMTCILPAAASLSSL 514

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G ++H + ++    +D+FV ++LIDMY KCG   LA  LF+R+  K+++ W  M+ G+
Sbjct: 515 ERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGY 574

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKD 533
             +G   +AI LF QM ++ +  D  +F   + ACS+ G  ++G ++       + +   
Sbjct: 575 GMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPR 634

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +   T + D+    G+L+ A    DSM  E +   W +++    +H  +  A  + +++ 
Sbjct: 635 LKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVF 694

Query: 593 DSGIKPNEVTFMNIL 607
           +  ++P    +  +L
Sbjct: 695 E--LEPENTGYYVLL 707



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 50/109 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S ++L +   +HA+ L  G   D   +  LI+ Y + G+L  +R +FD     + 
Sbjct: 505 LPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNL 564

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W +++  Y  +    ++I L+ +M           + ++L ACS  G
Sbjct: 565 ISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSG 613


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/731 (30%), Positives = 373/731 (51%), Gaps = 3/731 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++HA ++  GL         LI+ Y+  G +  +R VFD     D   W  +I     
Sbjct: 189 VEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSK 248

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N    E+I L+  M       + + + SVL AC  +  L  GE++HG ++K GF  D  +
Sbjct: 249 NECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 308

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y   G L  A  +F  M+ RD V+++++I          + +++F  M  +G+
Sbjct: 309 CNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGL 368

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           EPD  T+ SL  AC    +L   + +H +  +     +  +  + + +Y+KC D+ +A  
Sbjct: 369 EPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALN 428

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F++ E      W  M+  Y      + +   F +M   +  PN  T  ++L +C  LG 
Sbjct: 429 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 488

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H QII+        Y+   LI+ YA+ GK+     ++     ++++SW  +I+
Sbjct: 489 LELGEQIHSQIIKTSFQLNA-YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 547

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCK 431
            Y +     +AL    QM   G+  D   + +++SAC  + +L+ G QIH    +     
Sbjct: 548 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 607

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D   Q++L+ +YSKCG    AYL FE+ +    + WN+++ GF Q+GN+ EA+ +F +M 
Sbjct: 608 DLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMN 667

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              ++ +  TF +A++A S    +++GK VH  +   G   +  +  A+  MYAKCG + 
Sbjct: 668 REGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSIS 727

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A++ F  +S +N VSW+AMI+ Y  HG  ++A   F QM+ S ++PN VT + +L ACS
Sbjct: 728 DAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 787

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G V++G  YF +M   +G+ P  +HY C+VD+L+R+G +  A   I  MP   +  +W
Sbjct: 788 HIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVW 847

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL+ C +HK +++ +     L      D+  Y LLSN+YA    WD     R  M+  
Sbjct: 848 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEK 907

Query: 731 GLKKVPGYSTI 741
           G+KK PG S I
Sbjct: 908 GVKKEPGQSWI 918



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 180/669 (26%), Positives = 321/669 (47%), Gaps = 6/669 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH+ +L  G   +   S +L++ Y   G L  +  VFD   E   F W  +IK     +
Sbjct: 89  KLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRS 148

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGFDKDDVI 132
              +   L+ +M+ E  T +   +  VL AC   G +     E++H RII  G  K  ++
Sbjct: 149 LSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQGLGKSTIV 207

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++  Y   G +D AR+VFD +  +D  SW ++I+    N    E +++F  M   G+
Sbjct: 208 CNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGI 267

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P      S+  AC ++ SL     +HG VL+     D  + N+ + +Y   G L+SAE 
Sbjct: 268 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH 327

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  + +R   ++  +I+  ++ G+ +KA+E F +M     EP+  TL +++ +C+  G 
Sbjct: 328 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGT 387

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G+ +H    + G     D +  AL+  YA+C  +             N++ WN+++ 
Sbjct: 388 LFSGQQLHAYTTKLGFASN-DKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y      + +  +  QMQ   ++P+ ++  S L  C  +G L+LG QIH  +IK   + 
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL 506

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           + +V S LIDMY+K G  + A+ +  R   K VV W +MI G+ Q     +A+  F QM 
Sbjct: 507 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              +  DEV    A+ AC+ +  L++G+ +H +    G   D+    AL  +Y+KCG+++
Sbjct: 567 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIE 626

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A   F+     + ++W+A++  +   G   +A  +F +M   GI  N  TF + + A S
Sbjct: 627 EAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAAS 686

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            + ++++GK     +   G + + +    ++ + ++ G I  A K    +    N   W 
Sbjct: 687 ETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMK-NEVSWN 745

Query: 672 ALLNGCRIH 680
           A++N    H
Sbjct: 746 AMINAYSKH 754



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 173/627 (27%), Positives = 314/627 (50%), Gaps = 7/627 (1%)

Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
           G L  G K+H +I+K GFD +  +   +L  Y   G LD A KVFD+M  R + +W+ +I
Sbjct: 82  GSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMI 141

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKI 227
                 +   +   +F  MV E V P+  T   + EAC G   +      IH  ++ + +
Sbjct: 142 KELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGL 201

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
                + N  I +YS+ G +  A R F  +  +  +SW AMIS  +++    +A+  F  
Sbjct: 202 GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCD 261

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M  +   P      +VL +C  +  L  G+ +H  +++ G   +  Y+  AL+  Y   G
Sbjct: 262 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNALVSLYFHLG 320

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            +   E +   + +R+ +++N LI+  ++ G  ++A+EL  +MQ  GL PDS ++AS + 
Sbjct: 321 SLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVV 380

Query: 408 ACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC + G+L  G Q+H +  K+    ++ ++ +L+++Y+KC     A   F   + ++VV+
Sbjct: 381 ACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVL 440

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WN M+  +    +   +  +F QM +  +  ++ T+ + ++ C  +G LE G+ +H ++I
Sbjct: 441 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 500

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
               + + Y+ + L DMYAK G L TA  +    + ++VVSW+ MI  Y  +   + A +
Sbjct: 501 KTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 560

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
            F+QMLD GI+ +EV   N + AC+   +++EG+       + G   DL     +V L S
Sbjct: 561 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 620

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           + G+IE A+          N + W AL++G +     +    +   ++  G + N  +T 
Sbjct: 621 KCGNIEEAYLAFEQTEAGDNIA-WNALVSGFQQSGNNEEALRVFARMNREGIDSNN-FTF 678

Query: 707 LSNIYA--EEGNWDEFGKVRSIMEVTG 731
            S + A  E  N  +  +V +++  TG
Sbjct: 679 GSAVKAASETANMKQGKQVHAVITKTG 705



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 226/465 (48%), Gaps = 37/465 (7%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L  L    ++H+ ++ T    +    + LI+ YA++G L ++  +   F   D
Sbjct: 479 ILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 538

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y   NF ++++  + +M+            + + AC+ L  L  G+++H 
Sbjct: 539 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 598

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +    GF  D   Q +++  Y + G +++A   F++  + D ++W+++++ +  + +  E
Sbjct: 599 QACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 658

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M REG++ +  T  S  +A  E  +++  + +H  + +     +  + N+ I 
Sbjct: 659 ALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIIS 718

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  A++ F+++  +   SW AMI+ Y++ G+  +AL+SF +M+     PN +T
Sbjct: 719 MYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 778

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ VL +C+ +G + +G         + M  EY  L P                K  H +
Sbjct: 779 LVGVLSACSHIGLVDKGIEYF-----ESMNTEYG-LAP----------------KPEHYV 816

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              ++L+         R G+   A + +++M    + PD+    + LSAC    ++++G 
Sbjct: 817 CVVDMLT---------RAGLLSRAKDFILEMP---IEPDALVWRTLLSACVVHKNMEIGE 864

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
               H+++++ +D      L ++Y+ C   +   L  +++++K V
Sbjct: 865 FAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGV 909


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 232/705 (32%), Positives = 359/705 (50%), Gaps = 50/705 (7%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           YA  G +  ++ +FD   E D   W  LI  Y+ N    + I ++ +M R         +
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
             VL++CSSL D G G ++HG  +K GFD D V  +++L  Y +   LD + + F  M  
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           ++ VSWS+IIA    N D+  GL++F  M + GV     T  S+  +C  L +LR    +
Sbjct: 238 KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQL 297

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HGH L+     D  +G + + MY KC +L  A++ F  +      S+ A+I  Y RS   
Sbjct: 298 HGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD-- 355

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
                   K L + E    ++L     +CA +    EG  VH  +  K +      +  A
Sbjct: 356 --------KGLGLDE----VSLSGAFRACAVIKGDLEGLQVH-GLSMKSLCQSNICVANA 402

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           +++ Y +CG + E   V   +  R+ +SWN +I+ + + G  ++ L L            
Sbjct: 403 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF----------- 451

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
                                 IH  +IK     D FV  +LIDMYSKCG    A  L +
Sbjct: 452 ----------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHD 489

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           R+ +++VV WN++I GF     S EA   F +M    ++ D  T+ T +  C+N+  +E 
Sbjct: 490 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 549

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H ++I   ++ D YI + L DMY+KCG++Q  Q +F+    R+ V+W+AM+  Y  
Sbjct: 550 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 609

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG   +A  +F+ M    +KPN  TF+ +L AC H G VE+G  YF++M   +G++P L+
Sbjct: 610 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 669

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HY+C+VD++ RSG +  A ++I  MPF A+  IW  LL+ C+IH  ++V +     +   
Sbjct: 670 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQL 729

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              D+  Y LLSNIYA  G W+E  K+R +M   GLKK PG S I
Sbjct: 730 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 774



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 281/615 (45%), Gaps = 81/615 (13%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  + + CS    L  G++ H R+I   F     +   ++  Y +   L+ A KVFD M 
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMP 104

Query: 158 SR-------------------------------DVVSWSSIIASYFDNADVSEGLKMFHS 186
            R                               DVVSW+S+I+ Y  N D  + + +F  
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQ 164

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M R G   D  T   + ++C  L        IHG  ++     D   G++ + MY+KC  
Sbjct: 165 MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  + + F  + ++   SW+A+I+   ++   +  LE F +M +     +  T  +V  S
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CAGL  LR G  +H   ++   G +   +G A ++ Y +C  +S+ +K+ +++   N+ S
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDV-VIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           +N +I  YAR                 GL  D  S++ +  AC  +     GLQ+HG  +
Sbjct: 344 YNAIIVGYARSDK--------------GLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 389

Query: 427 KIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K  C+    V ++++DMY KCG    A L+FE +  +  V WN++I    QNGN  + ++
Sbjct: 390 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 449

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF                                 +H+++I   +  D ++  AL DMY+
Sbjct: 450 LF---------------------------------IHNRIIKSRLGLDSFVGIALIDMYS 476

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG ++ A+++ D ++E+ VVSW+A+I  + +  Q  +A   F +ML+ G+ P+  T+  
Sbjct: 477 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 536

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           IL  C++  +VE GK     +    ++ D    + +VD+ S+ G+++  F++I       
Sbjct: 537 ILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD-FQLIFEKAPNR 595

Query: 666 NGSIWGALLNGCRIH 680
           +   W A++ G   H
Sbjct: 596 DFVTWNAMVCGYAQH 610



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 257/538 (47%), Gaps = 65/538 (12%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + +SC++L       ++H   +  G   D    + L++ YA+   L  S   F +  E +
Sbjct: 180 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKN 239

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I   + N+     + L+ +M +    +S   + SV R+C+ L  L  G ++HG
Sbjct: 240 WVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHG 299

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY-------- 171
             +K  F  D VI T+ L  Y +   L DA+K+F+ + + ++ S+++II  Y        
Sbjct: 300 HALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLG 359

Query: 172 FDNADVSEGLKMFHSMVR---EGVEPDFVTMLSLAEA--------------CGELCSL-- 212
            D   +S   +   ++++   EG++   ++M SL ++              CG L     
Sbjct: 360 LDEVSLSGAFRAC-AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 418

Query: 213 -------RPARS---------------------IHGHVLRRKIKIDGPLGNSFIVMYSKC 244
                  R A S                     IH  +++ ++ +D  +G + I MYSKC
Sbjct: 419 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKC 478

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G +  AE+   ++ ++   SW A+IS ++     ++A ++F KMLE+  +P+  T  T+L
Sbjct: 479 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 538

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +CA L  +  GK +H QII+K +  +  Y+   L++ Y++CG M + + +      R+ 
Sbjct: 539 DTCANLVTVELGKQIHAQIIKKELQSDA-YISSTLVDMYSKCGNMQDFQLIFEKAPNRDF 597

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           ++WN ++  YA+ G+ +EAL++   MQ   + P+  +  + L ACG++G ++ GL     
Sbjct: 598 VTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHS 657

Query: 425 VIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSM--ICGFYQN 477
           ++     D  ++  S ++D+  + G  + A  L E +  +   V+W ++  IC  + N
Sbjct: 658 MLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGN 715



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 40/212 (18%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ--------- 551
           TF    Q CS+   L  GK  H ++I    +  +++   L  MY KC DL+         
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 552 ----------------------TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
                                  AQ++FD+M ER+VVSW+++I  Y  +G       +F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 590 QMLDSGIKPNEVTFMNILWACS----HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLL 645
           QM   G   +  TF  +L +CS    H G ++    +  A+++ G + D+   + ++D+ 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQ---IHGLAVKM-GFDCDVVTGSALLDMY 219

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           ++   ++ + +  HSMP   N   W A++ GC
Sbjct: 220 AKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGC 250


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/655 (32%), Positives = 358/655 (54%), Gaps = 5/655 (0%)

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
           + + +  Y  ++ ACSSL  L  G K+H  ++ C +  D ++Q  IL  YG+ G L +AR
Sbjct: 94  SPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEAR 153

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            +FD M  ++VVSW+S+I+ Y    +    + ++  M+R G  PD  T  S+ ++C  L 
Sbjct: 154 NMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLD 213

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
             + AR +H HVL+ +   D    N+ I MY+K   +  A   F +I  +   SW +MI+
Sbjct: 214 DFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIA 273

Query: 271 CYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
            +++ G+  +AL  F +ML +   +PN     +   +C+ L     G+ +H   I+ G+G
Sbjct: 274 GFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG 333

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  + G +L + YA+CG +     V + I + ++++WN +I+ +A    +KE+     Q
Sbjct: 334 SDL-FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQ 392

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+  GL+P+  +V S L AC     L  G+Q+H +++K+    D  V +SL+ MYSKC  
Sbjct: 393 MRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSN 452

Query: 449 KNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
            N A  +FE I  K+ +V WN+++    Q   + E + L   M+ + ++ D VT    + 
Sbjct: 453 LNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLV 512

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           +   I   E G  +H  ++  G+  DI +  AL +MY KCG L+ A+++FDS+   +++S
Sbjct: 513 SSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIIS 572

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAM 626
           WS++I  Y   G   +A  LF+ M   G+KPNE+TF+ IL ACSH G VEEG K Y    
Sbjct: 573 WSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQ 632

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             + + P  +H +CMVDLL+R+G ++ A   I  MPF  +  +W  LL  C++H  ++V 
Sbjct: 633 EDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVG 692

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K   + +     +++    +L NI+A  G+W +F ++RS M    + KVPG S I
Sbjct: 693 KRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWI 747



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 163/587 (27%), Positives = 291/587 (49%), Gaps = 9/587 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C++LR L    ++H H+L      D      ++  Y + GSL+ +R +FD+    +
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y      + +I LY +M+R      +F + S++++CS L D     ++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K  F  D + Q +++  Y +F  + DA  VF ++  +D++SW S+IA +       E
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 180 GLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L  F  M+ + V +P+     S   AC +L      R IHG  ++  +  D   G S  
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLC 343

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG L SA   F  IEK    +W A+I+ +      +++   F +M      PN +
Sbjct: 344 DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++++L +C+    L  G  VH  I++ G   +      +L+  Y++C  +++  +V   
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCN-SLLSMYSKCSNLNDALQVFED 462

Query: 359 IGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           IG + +I+SWN L++   ++  + E L L   M    + PD  ++ + L + G + S ++
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G QIH  ++K     D  V ++LI+MY+KCG    A  +F+ I    ++ W+S+I G+ Q
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIY 535
            G   EA  LF  M    ++ +E+TF+  + ACS+IG +E+G  ++  +   Y +     
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
             + + D+ A+ G L  A+     M    +VV W  ++    +HG L
Sbjct: 643 HCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNL 689


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/742 (30%), Positives = 387/742 (52%), Gaps = 6/742 (0%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R C + R L     +H  ++   ++ D      L+  YA+      +RLV     + D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI+  +   F  +SI L+ +M  E    + F   + L+ACS    L  G+++H 
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +  K G   D  + ++++  Y + G ++ A K+F  M  ++ V+W+ ++  Y    DV+ 
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F SM+   V+ +  T+ ++ + C    +L+  + IH  +++   + +  +G   + 
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG  + A   F  I+K     W+A+I+C ++ G  +++++ F  M      PN  T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++L +    G L+ G+S+H  + + G   +   +  AL+  Y + G + +  K+  ++
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDV-AVSNALVTMYMKNGCVHDGTKLYESM 476

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +R+++SWN  +S     GM    L +   M   G +P+ ++  S L +C  +  +  G 
Sbjct: 477 VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGR 536

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H H+IK    D  FV ++LIDMY+KC +   A + F R+  + +  W  +I  + Q  
Sbjct: 537 QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTN 596

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              +A+N F QM    ++ +E T    +  CS++  LE G+ +H  +   G   D+++ +
Sbjct: 597 QGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGS 656

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMYAKCG ++ A+ +F+++  R+ ++W+ +I  Y  +GQ N A + F+ MLD GI P
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP 716

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + VTF  IL ACSH G VEEGK +FN+M R FG+ P + H ACMVD+L R G  +     
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDF 776

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  M    N  IW  +L   ++H  + + +    +L      +   Y LLSNI+A EG W
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRW 836

Query: 718 DEFGKVRSIMEVTGLKKVPGYS 739
           D+  +VRS+M   G+KK PG S
Sbjct: 837 DDVKRVRSLMSSKGVKKEPGCS 858



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 295/565 (52%), Gaps = 2/565 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S+LR C+S   LG  + +HG I+K   + D  +  S++  Y +      AR V  KM 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDVVSW+++I         ++ + +F  M  EG+ P+  T+ +  +AC    +L   + 
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H    +  + +D  +G++ + +Y+KCG++  A + F+ + ++   +W  +++ Y + G 
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
               L+ F  M+E+  + N  TL TVL  CA    L++G+ +H  II+ G     +++G 
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN-EFIGC 353

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L++ Y++CG   +   V   I + +I+ W+ LI+   ++G S+E+++L   M+    +P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           + +++ S LSA  N G+LQ G  IH  V K   + D  V ++L+ MY K G  +    L+
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E +  + ++ WN+ + G +  G     + +F+ M       +  TF++ + +CS +  + 
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            G+ VH  +I   +  + ++ TAL DMYAKC  L+ A   F+ +S R++ +W+ +I  Y 
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
              Q   A + F+QM   G+KPNE T    L  CS   S+E G+   + +   G   D+ 
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMF 653

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSM 661
             + +VD+ ++ G +E A  +  ++
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEAL 678



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%)

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           + + ++ C++   L   K +H  ++   +  D ++  +L ++YAKC     A+ V   M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           +R+VVSW+A+I      G  ND+  LF++M + GI PNE T    L ACS   +++ GK 
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                   G+  DL   + +VDL ++ G+IE A KM   MP   N   W  LLNG
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/742 (30%), Positives = 387/742 (52%), Gaps = 6/742 (0%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R C + R L     +H  ++   ++ D      L+  YA+      +RLV     + D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI+  +   F  +SI L+ +M  E    + F   + L+ACS    L  G+++H 
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +  K G   D  + ++++  Y + G ++ A K+F  M  ++ V+W+ ++  Y    DV+ 
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F SM+   V+ +  T+ ++ + C    +L+  + IH  +++   + +  +G   + 
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG  + A   F  I+K     W+A+I+C ++ G  +++++ F  M      PN  T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++L +    G L+ G+S+H  + + G   +   +  AL+  Y + G + +  K+  ++
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA-VSNALVTMYMKNGCVHDGTKLYESM 476

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +R+++SWN  +S     GM    L +   M   G +P+ ++  S L +C  +  +  G 
Sbjct: 477 VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGR 536

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H H+IK    D  FV ++LIDMY+KC +   A + F R+  + +  W  +I  + Q  
Sbjct: 537 QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTN 596

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              +A+N F QM    ++ +E T    +  CS++  LE G+ +H  +   G   D+++ +
Sbjct: 597 QGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGS 656

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMYAKCG ++ A+ +F+++  R+ ++W+ +I  Y  +GQ N A + F+ MLD GI P
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP 716

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + VTF  IL ACSH G VEEGK +FN+M R FG+ P + H ACMVD+L R G  +     
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDF 776

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  M    N  IW  +L   ++H  + + +    +L      +   Y LLSNI+A EG W
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRW 836

Query: 718 DEFGKVRSIMEVTGLKKVPGYS 739
           D+  +VRS+M   G+KK PG S
Sbjct: 837 DDVKRVRSLMSSKGVKKEPGCS 858



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 295/565 (52%), Gaps = 2/565 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S+LR C+S   LG  + +HG I+K   + D  +  S++  Y +      AR V  KM 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDVVSW+++I         ++ + +F  M  EG+ P+  T+ +  +AC    +L   + 
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H    +  + +D  +G++ + +Y+KCG++  A + F+ + ++   +W  +++ Y + G 
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
               L+ F  M+E+  + N  TL TVL  CA    L++G+ +H  II+ G     +++G 
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN-EFIGC 353

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L++ Y++CG   +   V   I + +I+ W+ LI+   ++G S+E+++L   M+    +P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           + +++ S LSA  N G+LQ G  IH  V K   + D  V ++L+ MY K G  +    L+
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E +  + ++ WN+ + G +  G     + +F+ M       +  TF++ + +CS +  + 
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            G+ VH  +I   +  + ++ TAL DMYAKC  L+ A   F+ +S R++ +W+ +I  Y 
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
              Q   A + F+QM   G+KPNE T    L  CS   S+E G+   + +   G   D+ 
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMF 653

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSM 661
             + +VD+ ++ G +E A  +  ++
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEAL 678



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%)

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           + + ++ C++   L   K +H  ++   +  D ++  +L ++YAKC     A+ V   M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           +R+VVSW+A+I      G  ND+  LF++M + GI PNE T    L ACS   +++ GK 
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                   G+  DL   + +VDL ++ G+IE A KM   MP   N   W  LLNG
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/560 (36%), Positives = 327/560 (58%), Gaps = 3/560 (0%)

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  ++R G  PD  T+  +  AC +L +L+  R IH  V +  + +D  +  + + MY K
Sbjct: 18  FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           C ++  A   F K+++R   +WT MI  Y   G   ++L  F KM E    P+ + ++TV
Sbjct: 78  CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           + +CA LG + + + +   I RK    +   LG A+I+ YA+CG +    ++   + E+N
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDV-ILGTAMIDMYAKCGCVESAREIFDRMEEKN 196

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SW+ +I+ Y   G  ++AL+L   M + G++PD  ++AS L AC ++ +LQ+G  IH 
Sbjct: 197 VISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHH 256

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            V K     D FV ++L+DMY KC     A  LF+++ ++ +V W  MI G+ + GN+ E
Sbjct: 257 IVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANE 316

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           ++ LF +M    +  D+V  +T + AC+ +G + K + +   +     + D+ + TA+ D
Sbjct: 317 SLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMID 376

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           M+AKCG +++A+ +FD M E+NV+SWSAMI  YG HGQ   A  LF  ML SGI PN++T
Sbjct: 377 MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 436

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            +++L+ACSH+G VEEG  +F+ M   + V  D++HY C+VDLL R+G ++ A K+I SM
Sbjct: 437 LVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 496

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
               +  +WGA L  CR HK + + +     L      + G+Y LLSNIYA  G W++  
Sbjct: 497 TVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVA 556

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           K R +M    LKK+PG++ I
Sbjct: 557 KTRDLMSQRRLKKIPGWTWI 576



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 285/493 (57%), Gaps = 4/493 (0%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           + ++IR  A   N+  P V+RAC  L +L  G  +H  + K G D D  +  +++  Y +
Sbjct: 18  FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
              ++DAR +FDKM  RD+V+W+ +I  Y +    +E L +F  M  EGV PD V M+++
Sbjct: 78  CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
             AC +L ++  AR I  ++ R+K ++D  LG + I MY+KCG + SA   F ++E++  
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 197

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW+AMI+ Y   G  +KAL+ F  ML     P+ ITL ++L +C+ L  L+ G+ +H  
Sbjct: 198 ISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHI 257

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           + + G+  ++ ++  AL++ Y +C ++ +   +   + ER++++W ++I  YA  G + E
Sbjct: 258 VYKFGLDLDH-FVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANE 316

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
           +L L  +M+  G++PD  ++ + + AC  +G++     I  ++ +   + D  + +++ID
Sbjct: 317 SLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMID 376

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           M++KCG    A  +F+R+++K+V+ W++MI  +  +G   +A++LF  M  + +  +++T
Sbjct: 377 MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 436

Query: 502 FLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            ++ + ACS+ G +E+G ++       Y VR D+   T + D+  + G L  A ++ +SM
Sbjct: 437 LVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 496

Query: 561 S-ERNVVSWSAMI 572
           + E++   W A +
Sbjct: 497 TVEKDEGLWGAFL 509



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 249/478 (52%), Gaps = 13/478 (2%)

Query: 3   LFRSCTNLRKLT--RLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C +L+ L   RL  H++   GL  D      L++ Y +   +  +R +FD  +E D
Sbjct: 36  VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 95

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W V+I  Y       ES++L+ KM  E          +V+ AC+ LG +     +  
Sbjct: 96  LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 155

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I +  F  D ++ T+++  Y + GC++ AR++FD+M  ++V+SWS++IA+Y  +    +
Sbjct: 156 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 215

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M+  G+ PD +T+ SL  AC +L +L+  R IH  V +  + +D  +  + + 
Sbjct: 216 ALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 275

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KC ++  A   F K+ +R   +WT MI  Y   G   ++L  F KM E    P+ + 
Sbjct: 276 MYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 335

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++TV+ +CA LG + + +++   I RK    +   LG A+I+ +A+CG +    ++   +
Sbjct: 336 MVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV-ILGTAMIDMHAKCGCVESAREIFDRM 394

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+N++SW+ +I+ Y   G  ++AL+L   M   G++P+  ++ S L AC + G ++ GL
Sbjct: 395 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 454

Query: 420 QI-----HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
           +        + ++ D K     + ++D+  + G  + A  L E +  +K   +W + +
Sbjct: 455 RFFSLMWEDYSVRADVKH---YTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFL 509



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 114/211 (54%), Gaps = 1/211 (0%)

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           M+ GF + G+ +     F ++       D  T    I+AC ++  L+ G+ +HH +  +G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +  D ++  AL DMY KC +++ A+ +FD M ER++V+W+ MI  Y   G+ N++  LF+
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           +M + G+ P++V  + +++AC+  G++ + +   + ++    + D+     M+D+ ++ G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            +E A ++   M    N   W A++     H
Sbjct: 181 CVESAREIFDRME-EKNVISWSAMIAAYGYH 210


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/648 (33%), Positives = 343/648 (52%), Gaps = 12/648 (1%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD---ARKVFDKMTS 158
           L AC+S   L    ++HGR+++     D  +   ++          D   ARKVFD M  
Sbjct: 24  LDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR---PA 215
            +   W+ +I  Y       + L +F  M R GV PD  TM ++  A      L+     
Sbjct: 81  PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNG 140

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
            +IH  V R     D  + +  +  Y     +  A + F ++ +R   SWT+MIS   + 
Sbjct: 141 DAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQC 200

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G + K L+   +M      PN +T+I++L +C     + EG+ V+ Q+ + G+  + D +
Sbjct: 201 GHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVD-I 259

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI  Y +CG +S+  +   A+  R   SWN LI  + +    KEAL +  +M   G+
Sbjct: 260 RNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGV 319

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
            PD  ++ S LSAC  +G L+ G+ +H ++     C D  + +SLI+MY+KCG    A  
Sbjct: 320 TPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAER 379

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+ + +K VV W  M+CG+ +      A NLF +M +  +   E+  ++ + ACS +G 
Sbjct: 380 VFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGA 439

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L+KG+ +H  +    V KD+ +++AL DMYAKCG + TA  +F  M  +  +SW+AMI  
Sbjct: 440 LDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGG 499

Query: 575 YGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
              +G   +A  LF QML+    KP+ +T   +L AC+H G V+EG  YF  M   GV P
Sbjct: 500 LASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVP 559

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           D +HY C+VDLL R+G ++ AF  I  MP   N  IWG+LL  CR+H R+D+ K I + +
Sbjct: 560 DTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHI 619

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                ND G + L+SN++AEE  WD+   VR +M   G++K PG+S++
Sbjct: 620 VNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSV 667



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 181/605 (29%), Positives = 321/605 (53%), Gaps = 12/605 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE---SYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C +   L  LH  L+   L  D   + RLI    S A    +R +R VFD   +P++F+
Sbjct: 26  ACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFV 85

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL---GSGEKVHG 119
           W  +I+ Y       +++ ++ +M R   +  N+   +V+ A ++   L    +G+ +H 
Sbjct: 86  WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + + GF  D  + + ++  YG F  + +A KVF++M  RDVVSW+S+I++        +
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LKM   M  EG+ P+ VT++SL  ACG+  ++   R ++  V +  I+ D  + N+ I 
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG L  A   F  +  R T SW  +I  + ++   ++AL  F +ML     P+ IT
Sbjct: 266 MYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGIT 325

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L++VL +CA LG LR+G  VH  I   G+  + + L  +LI  YA+CG M+  E+V   +
Sbjct: 326 LVSVLSACAQLGELRKGMHVHSYIKDNGICCD-NILTNSLINMYAKCGDMAAAERVFQTM 384

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +++++SW +++  Y +      A  L  +M+   ++    ++ S LSAC  +G+L  G 
Sbjct: 385 TKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGR 444

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           +IH ++ +++  KD  ++S+L+DMY+KCG  + A  +F ++Q K  + WN+MI G   NG
Sbjct: 445 EIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNG 504

Query: 479 NSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
              EA+ LF QM  L   + D +T    + AC+++G +++G    + + S GV  D    
Sbjct: 505 YGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHY 564

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             + D+  + G L  A      M  E N V W +++    +H +++    + + +++  +
Sbjct: 565 GCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVN--V 622

Query: 597 KPNEV 601
            PN+V
Sbjct: 623 APNDV 627



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 251/485 (51%), Gaps = 12/485 (2%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG---DLLSAERTFV 255
           +L+  +AC     L     +HG ++R  +  D  +    I + +      D+  A + F 
Sbjct: 20  LLAYLDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFD 76

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA---GLGW 312
            + +     W  MI  Y+     + AL  F +M      P+  T+  V+ + A   GL W
Sbjct: 77  GMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKW 136

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              G ++H  + R G   +  ++   L+ +Y     + E  KV   + ER+++SW  +IS
Sbjct: 137 RSNGDAIHALVRRIGFTSDV-FVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMIS 195

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
             A+ G   + L++L +MQ  G++P+  ++ S LSACG   ++  G  ++  V K   + 
Sbjct: 196 ACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEA 255

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  ++++LI MY+KCG  + A   F+ +  +    WN++I GF QN    EA+ +F +M 
Sbjct: 256 DVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEML 315

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L+ +  D +T ++ + AC+ +G+L KG  VH  +   G+  D  +  +L +MYAKCGD+ 
Sbjct: 316 LHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMA 375

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+RVF +M++++VVSW+ M+  Y    Q   A +LF++M  + +  +E+  +++L ACS
Sbjct: 376 AAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACS 435

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
             G++++G+   + +    V  DL   + +VD+ ++ G I+ A ++   M      S W 
Sbjct: 436 QLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLS-WN 494

Query: 672 ALLNG 676
           A++ G
Sbjct: 495 AMIGG 499


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 217/709 (30%), Positives = 366/709 (51%), Gaps = 46/709 (6%)

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G L ++R + D   + +   W  +I     +    E++ LY  M+RE    ++F   SVL
Sbjct: 88  GDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVL 147

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVV 162
            AC ++  L  G + HG  +K G D++  ++ ++L  Y + G ++DA ++FD M S + V
Sbjct: 148 SACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEV 207

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS--------LRP 214
           S+++++        V + L++F  M R GV  D V + S+  +C + C+         R 
Sbjct: 208 SFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRL 267

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IH  ++R+    D  +GNS I MY+KC  +  A + F  +    T SW  +I+ + +
Sbjct: 268 GQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQ 327

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G + KALE    M E   EPN +T   +L SC     +   +++  +I R         
Sbjct: 328 AGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRP-------- 379

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
                                       ++ +WN L+S Y ++ + ++ +EL  +MQ   
Sbjct: 380 ----------------------------SVTTWNTLLSGYCQEELHQDTVELFRRMQHQN 411

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAY 453
           + PD  ++A  LS+C  +G L LG Q+H   ++ +   D FV S L+DMYSKCG   +A 
Sbjct: 412 VQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 471

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           ++F R+ ++ VV WNSMI G   +  + EA + F QM  N +   E ++ + I +C+ + 
Sbjct: 472 IIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLS 531

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            + +G+ +H +++  G  +++Y+ +AL DMYAKCG++  A+  FD M  +N+V+W+ MI 
Sbjct: 532 SVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIH 591

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVE 632
            Y  +G    A  LF+ ML +  +P+ VTF+ +L  CSHSG V+E   +FN+M   +G+ 
Sbjct: 592 GYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGIT 651

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P  +HY C++D L R+G +     +I +MP   +  +W  LL  C +H   ++ +   K 
Sbjct: 652 PLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKH 711

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L      +   Y LLSNIYA  G   +   VR++M   G+ K  GYS I
Sbjct: 712 LFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWI 760



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 272/576 (47%), Gaps = 49/576 (8%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R H   +  GL  +      L+  Y + G +  +  +FD    P+   +  ++   +   
Sbjct: 161 RCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAG 220

Query: 75  FFEESILLYHKMIREQATISNFIYPSVL----RACSSLGDLGS----GEKVHGRIIKCGF 126
             ++++ L+ +M R    +      SVL    +AC+S  D+      G+ +H  I++ GF
Sbjct: 221 SVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGF 280

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             D  +  S++  Y +   +D+A KVFD + +   VSW+ +I  +      ++ L++ + 
Sbjct: 281 GSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNL 340

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G EP+ VT  ++  +C                                    K  D
Sbjct: 341 MEESGSEPNEVTYSNMLASC-----------------------------------IKARD 365

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +LSA   F KI +   T+W  ++S Y +    Q  +E F +M     +P+  TL  +L S
Sbjct: 366 VLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSS 425

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C+ LG L  G  VH   +R  +  +  ++   L++ Y++CG++     + + + ER+++ 
Sbjct: 426 CSRLGILDLGTQVHSASVRFLLHNDM-FVASGLVDMYSKCGQIGIARIIFNRMTERDVVC 484

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +IS  A   +++EA +   QM+  G+MP   S AS +++C  + S+  G QIH  ++
Sbjct: 485 WNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIV 544

Query: 427 KIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           K D  D+  +V S+LIDMY+KCG  + A + F+ +  K++V WN MI G+ QNG   +A+
Sbjct: 545 K-DGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAV 603

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDM 543
           +LF  M       D VTF+  +  CS+ G +++     + + S YG+       T L D 
Sbjct: 604 DLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDG 663

Query: 544 YAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             + G L   + + D+M  + + + W  ++    +H
Sbjct: 664 LGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVH 699



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 207/455 (45%), Gaps = 46/455 (10%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ +    + GDL +A     ++  R   SW  +I+   RS    +ALE +  ML     
Sbjct: 78  NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P   TL +VL +C  +  L +G+  H   ++ G+  E  ++  AL+  Y +CG + +  +
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGL-DENLFVENALLGMYTKCGGVEDAVR 196

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN--- 411
           +   +   N +S+  ++    + G   +AL L  +M   G+  D  +V+S L +C     
Sbjct: 197 LFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACA 256

Query: 412 -----VGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
                V + +LG  IH  +++     D+ V +SLIDMY+KC   + A  +F+ +   S V
Sbjct: 257 SEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTV 316

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN +I GF Q G+  +A+ + + M  +  E +EVT+   + +C                
Sbjct: 317 SWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASC---------------- 360

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
                               K  D+ +A+ +FD +S  +V +W+ ++  Y       D  
Sbjct: 361 -------------------IKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTV 401

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLL 645
            LF++M    ++P+  T   IL +CS  G ++ G    +A   F +  D+   + +VD+ 
Sbjct: 402 ELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMY 461

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           S+ G I G  ++I +     +   W ++++G  IH
Sbjct: 462 SKCGQI-GIARIIFNRMTERDVVCWNSMISGLAIH 495



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 109/207 (52%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC+ L  L   T++H+  +   LH D   ++ L++ Y++ G +  +R++F+   E D
Sbjct: 422 ILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERD 481

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     ++  EE+   + +M       +   Y S++ +C+ L  +  G ++H 
Sbjct: 482 VVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHA 541

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +I+K G+D++  + ++++  Y + G +DDAR  FD M ++++V+W+ +I  Y  N    +
Sbjct: 542 QIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEK 601

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            + +F  M+     PD VT +++   C
Sbjct: 602 AVDLFEYMLTTEQRPDGVTFIAVLTGC 628



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           R + Y   A      + GDL  A+ + D M +RNVVSW+ +I       +  +A  L++ 
Sbjct: 71  RPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEG 130

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           ML  G+ P   T  ++L AC    ++++G+         G++ +L     ++ + ++ G 
Sbjct: 131 MLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGG 190

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNG 676
           +E A ++   M  P N   + A++ G
Sbjct: 191 VEDAVRLFDGMASP-NEVSFTAMMGG 215


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/648 (33%), Positives = 343/648 (52%), Gaps = 12/648 (1%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD---ARKVFDKMTS 158
           L AC+S   L    ++HGR+++     D  +   ++          D   ARKVFD M  
Sbjct: 24  LDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR---PA 215
            +   W+ +I  Y       + L +F  M R GV PD  TM ++  A      L+     
Sbjct: 81  PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNG 140

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
            +IH  V R     D  + +  +  Y     +  A + F ++ +R   SWT+MIS   + 
Sbjct: 141 DAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQC 200

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G + K L+   +M      PN +T+I++L +C     + EG+ V+ Q+ + G+  + D +
Sbjct: 201 GHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVD-I 259

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI  Y +CG +S+  +   A+  R   SWN LI  + +    KEAL +  +M   G+
Sbjct: 260 RNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGV 319

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
            PD  ++ S LSAC  +G L+ G+ +H ++     C D  + +SLI+MY+KCG    A  
Sbjct: 320 TPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAER 379

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+ + +K VV W  M+CG+ +      A NLF +M +  +   E+  ++ + ACS +G 
Sbjct: 380 VFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGA 439

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L+KG+ +H  +    V KD+ +++AL DMYAKCG + TA  +F  M  +  +SW+AMI  
Sbjct: 440 LDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGG 499

Query: 575 YGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
              +G   +A  LF QML+    KP+ +T   +L AC+H G V+EG  YF  M   GV P
Sbjct: 500 LASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVP 559

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           D +HY C+VDLL R+G ++ AF  I  MP   N  IWG+LL  CR+H R+D+ K I + +
Sbjct: 560 DTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHI 619

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                ND G + L+SN++AEE  WD+   VR +M   G++K PG+S++
Sbjct: 620 VNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSV 667



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/605 (29%), Positives = 322/605 (53%), Gaps = 12/605 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE---SYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C +   L  LH  L+   L  D   + RLI    S A    +R +R VFD   +P++F+
Sbjct: 26  ACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFV 85

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL---GSGEKVHG 119
           W  +I+ Y       +++ ++ +M R   +  N+   +V+ A ++   L    +G+ +H 
Sbjct: 86  WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + + GF  D  + + ++  YG F  +++A KVF++M  RDVVSW+S+I++        +
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LKM   M  EG+ P+ VT++SL  ACG+  ++   R ++  V +  I+ D  + N+ I 
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG L  A   F  +  R T SW  +I  + ++   ++AL  F +ML     P+ IT
Sbjct: 266 MYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGIT 325

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L++VL +CA LG LR+G  VH  I   G+  + + L  +LI  YA+CG M+  E+V   +
Sbjct: 326 LVSVLSACAQLGELRKGMHVHSYIKDNGICCD-NILTNSLINMYAKCGDMAAAERVFQTM 384

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +++++SW +++  Y +      A  L  +M+   ++    ++ S LSAC  +G+L  G 
Sbjct: 385 TKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGR 444

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           +IH ++ +++  KD  ++S+L+DMY+KCG  + A  +F ++Q K  + WN+MI G   NG
Sbjct: 445 EIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNG 504

Query: 479 NSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
              EA+ LF QM  L   + D +T    + AC+++G +++G    + + S GV  D    
Sbjct: 505 YGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHY 564

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             + D+  + G L  A      M  E N V W +++    +H +++    + + +++  +
Sbjct: 565 GCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVN--V 622

Query: 597 KPNEV 601
            PN+V
Sbjct: 623 APNDV 627



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 251/485 (51%), Gaps = 12/485 (2%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG---DLLSAERTFV 255
           +L+  +AC     L     +HG ++R  +  D  +    I + +      D+  A + F 
Sbjct: 20  LLAYLDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFD 76

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA---GLGW 312
            + +     W  MI  Y+     + AL  F +M      P+  T+  V+ + A   GL W
Sbjct: 77  GMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKW 136

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              G ++H  + R G   +  ++   L+ +Y     + E  KV   + ER+++SW  +IS
Sbjct: 137 RSNGDAIHALVRRIGFTSDV-FVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMIS 195

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
             A+ G   + L++L +MQ  G++P+  ++ S LSACG   ++  G  ++  V K   + 
Sbjct: 196 ACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEA 255

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  ++++LI MY+KCG  + A   F+ +  +    WN++I GF QN    EA+ +F +M 
Sbjct: 256 DVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEML 315

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L+ +  D +T ++ + AC+ +G+L KG  VH  +   G+  D  +  +L +MYAKCGD+ 
Sbjct: 316 LHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMA 375

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+RVF +M++++VVSW+ M+  Y    Q   A +LF++M  + +  +E+  +++L ACS
Sbjct: 376 AAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACS 435

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
             G++++G+   + +    V  DL   + +VD+ ++ G I+ A ++   M      S W 
Sbjct: 436 QLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLS-WN 494

Query: 672 ALLNG 676
           A++ G
Sbjct: 495 AMIGG 499


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/655 (32%), Positives = 358/655 (54%), Gaps = 5/655 (0%)

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
           + + +  Y  ++ ACSSL  L  G K+H  ++ C +  D ++Q  IL  YG+ G L +AR
Sbjct: 94  SPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEAR 153

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            +FD M  ++VVSW+S+I+ Y    +    + ++  M+R G  PD  T  S+ ++C  L 
Sbjct: 154 NMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLD 213

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
             + AR +H HVL+ +   D    N+ I MY+K   +  A   F +I  +   SW +MI+
Sbjct: 214 DFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIA 273

Query: 271 CYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
            +++ G+  +AL  F +ML +   +PN     +   +C+ L     G+ +H   I+ G+G
Sbjct: 274 GFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG 333

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  + G +L + YA+CG +     V + I + ++++WN +I+ +A    +KE+     Q
Sbjct: 334 SDL-FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQ 392

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+  GL+P+  +V S L AC     L  G+Q+H +++K+    D  V +SL+ MYSKC  
Sbjct: 393 MRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSN 452

Query: 449 KNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
            N A  +FE I  K+ +V WN+++    Q   + E + L   M+ + ++ D VT    + 
Sbjct: 453 LNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLV 512

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           +   I   E G  +H  ++  G+  DI +  AL +MY KCG L+ A+++FDS+   +++S
Sbjct: 513 SSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIIS 572

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAM 626
           WS++I  Y   G   +A  LF+ M   G+KPNE+TF+ IL ACSH G VEEG K Y    
Sbjct: 573 WSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQ 632

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             + + P  +H +CMVDLL+R+G ++ A   I  MPF  +  +W  LL  C++H  ++V 
Sbjct: 633 EDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVG 692

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K   + +     +++    +L NI+A  G+W +F ++RS M    + KVPG S I
Sbjct: 693 KRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWI 747



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/587 (27%), Positives = 291/587 (49%), Gaps = 9/587 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C++LR L    ++H H+L      D      ++  Y + GSL+ +R +FD+    +
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y      + +I LY +M+R      +F + S++++CS L D     ++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K  F  D + Q +++  Y +F  + DA  VF ++  +D++SW S+IA +       E
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 180 GLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L  F  M+ + V +P+     S   AC +L      R IHG  ++  +  D   G S  
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLC 343

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG L SA   F  IEK    +W A+I+ +      +++   F +M      PN +
Sbjct: 344 DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++++L +C+    L  G  VH  I++ G   +      +L+  Y++C  +++  +V   
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCN-SLLSMYSKCSNLNDALQVFED 462

Query: 359 IGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           IG + +I+SWN L++   ++  + E L L   M    + PD  ++ + L + G + S ++
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G QIH  ++K     D  V ++LI+MY+KCG    A  +F+ I    ++ W+S+I G+ Q
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIY 535
            G   EA  LF  M    ++ +E+TF+  + ACS+IG +E+G  ++  +   Y +     
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
             + + D+ A+ G L  A+     M    +VV W  ++    +HG L
Sbjct: 643 HCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNL 689


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/631 (34%), Positives = 351/631 (55%), Gaps = 12/631 (1%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  ++  G  +   I T ++  Y   G +  +R  FD++  +DV +W+S+I++Y  N  
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 177 VSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
             E +  F+ ++    + PDF T   + +ACG L      R IH    +   + +  +  
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAA 254

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S I MYS+ G    A   F  +  R   SW AMIS   ++G   +AL+   +M     + 
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEK 354
           N +T++++L  C  LG +     +H  +I+ G+  E+D ++  ALI  YA+ G + +  K
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL--EFDLFVSNALINMYAKFGNLEDARK 372

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
               +   +++SWN +I+ Y +      A    V+MQ  G  PD  ++ S  S       
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 415 LQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            +    +HG +++     +D  + ++++DMY+K G  + A+ +FE I  K V+ WN++I 
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLIT 492

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEM--DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           G+ QNG + EAI ++ +M   C E+  ++ T+++ + A +++G L++G  +H ++I   +
Sbjct: 493 GYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 551

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             D+++ T L D+Y KCG L  A  +F  + + + V+W+A+I C+G+HG       LF +
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 611

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           MLD G+KP+ VTF+++L ACSHSG VEEGK+ F  M+ +G++P L+HY CMVDLL R+G 
Sbjct: 612 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGY 671

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
           +E A+  I  MP   + SIWGALL  CRIH  I++ K     L    + + GYY LLSNI
Sbjct: 672 LEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNI 731

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           YA  G W+   KVRS+    GLKK PG+STI
Sbjct: 732 YANVGKWEGVDKVRSLARERGLKKTPGWSTI 762



 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 200/659 (30%), Positives = 339/659 (51%), Gaps = 43/659 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF S T       LHA L+V G       STRL+  YA +G +  SR  FD   + D + 
Sbjct: 125 LFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYA 184

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I  Y+ N  F E+I  +++++       +F  +P VL+AC +L D   G K+H   
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWA 241

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            K GF  +  +  S++  Y  FG    AR +FD M  RD+ SW+++I+    N + ++ L
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +   M  EG++ +FVT++S+   C +L  +  A  IH +V++  ++ D  + N+ I MY
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +K G+L  A + F ++      SW ++I+ Y ++     A   FVKM     +P+L+TL+
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLV 421

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++    A     +  +SVH  I+R+G   E   +G A+++ YA+ G +    KV   I  
Sbjct: 422 SLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPV 481

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQ 420
           ++++SWN LI+ YA+ G++ EA+E+   M+    ++P+  +  S L A  +VG+LQ G++
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMK 541

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IHG VIK +   D FV + LID+Y KCG    A  LF ++ Q+S V WN++I     +G+
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGH 601

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
           + + + LF +M    ++ D VTF++ + ACS+ G +E+GKW    +  YG++  +     
Sbjct: 602 AEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK---- 657

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
                                       +  M+D  G  G L  A    K M    ++P+
Sbjct: 658 ---------------------------HYGCMVDLLGRAGYLEMAYDFIKDM---PLQPD 687

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE-PDLQHYACMVDLLSRSGDIEGAFKM 657
              +  +L AC   G++E GKF  +  R+F V+  ++ +Y  + ++ +  G  EG  K+
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASD--RLFEVDSKNVGYYVLLSNIYANVGKWEGVDKV 744



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 248/487 (50%), Gaps = 15/487 (3%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C  L    ++H      G  ++   +  LI  Y+  G    +R +FD     D  
Sbjct: 223 PVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 282

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I   + N    +++ +  +M  E   ++     S+L  C  LGD+ +   +H  +
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK G + D  +  +++  Y +FG L+DARK F +M   DVVSW+SIIA+Y  N D     
Sbjct: 343 IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAH 402

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVM 240
             F  M   G +PD +T++SLA    +    + +RS+HG ++RR  +  D  +GN+ + M
Sbjct: 403 GFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDM 462

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
           Y+K G L SA + F  I  +   SW  +I+ Y ++G   +A+E +  M E KE  PN  T
Sbjct: 463 YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGT 522

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++L + A +G L++G  +H ++I+  +  +  ++   LI+ Y +CG++ +   + + +
Sbjct: 523 WVSILPAYAHVGALQQGMKIHGRVIKTNLHLDV-FVATCLIDVYGKCGRLVDAMSLFYQV 581

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG- 418
            + + ++WN +IS +   G +++ L+L  +M   G+ PD  +  S LSAC + G ++ G 
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641

Query: 419 -----LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMIC 472
                +Q +G  IK   K       ++D+  + G+  +AY   + +  Q    +W +++ 
Sbjct: 642 WCFRLMQEYG--IKPSLKH---YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLG 696

Query: 473 GFYQNGN 479
               +GN
Sbjct: 697 ACRIHGN 703



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 5/160 (3%)

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
            K +H  L+  G  + I+I T L ++YA  GD+  ++  FD + +++V +W++MI  Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 578 HGQLNDAASLFKQ-MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
           +G  ++A   F Q +L S I+P+  TF  +L AC   G++ +G+         G + ++ 
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 251

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             A ++ + SR G    A  +   MPF   GS W A+++G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGS-WNAMISG 290



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  ++H  ++ T LH D   +T LI+ Y + G L  +  +F    +  S
Sbjct: 527 LPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 586

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
             W  +I C+  +   E+++ L+ +M+ E     +  + S+L ACS  G +  G+
Sbjct: 587 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/728 (30%), Positives = 378/728 (51%), Gaps = 7/728 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HAH++  GL  D    T L+  Y   G +    +VF   +EP+   W  L+  Y +N 
Sbjct: 80  QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNG 139

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E + +Y ++ R+    +     +V+R+C  L D   G +V G +IK G D    +  
Sbjct: 140 CVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVAN 199

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  +G    +++A  VFD M  RD +SW+SII +   N    + L+ F  M     + 
Sbjct: 200 SLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKT 259

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D++T+ +L   CG   +LR  R +HG V++  ++ +  + NS + MYS+ G    AE  F
Sbjct: 260 DYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVF 319

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            K+ +R   SW +M++ +  +G + +ALE  ++ML+ ++  N +T  T L +C  L  L 
Sbjct: 320 HKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL- 378

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
             K VH  +I  G+      +G AL+  Y + G M+  ++V   + +R+ ++WN LI  +
Sbjct: 379 --KIVHAFVILLGLHHNL-IIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGH 435

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS-LQLGLQIHGHVIKIDCKDE 433
           A       A+E    ++  G+  +  ++ + LSA  +    L  G+ IH H++    + E
Sbjct: 436 ADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELE 495

Query: 434 -FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            FVQSSLI MY++CG  N +  +F+ +  K+   WN+++      G   EA+ L  +M  
Sbjct: 496 TFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRN 555

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           + + +D+ +F  A     N+  L++G+ +H  +I +G   + Y+  A  DMY KCG++  
Sbjct: 556 DGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDD 615

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
             R+      R+  SW+ +I     HG    A   F +MLD G++P+ VTF+++L ACSH
Sbjct: 616 VFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSH 675

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            G V+EG  YF++M   FGV   ++H  C++DLL R+G +  A   I+ MP P    +W 
Sbjct: 676 GGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWR 735

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL  C+IH  +++ +     L    ++D+  Y L SN+ A    W +   VR  ME   
Sbjct: 736 SLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHN 795

Query: 732 LKKVPGYS 739
           +KK P  S
Sbjct: 796 IKKKPACS 803



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 159/645 (24%), Positives = 319/645 (49%), Gaps = 8/645 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y++ GS+  ++ VFD   E +   W  L+  ++   ++++++  +  M+      S+++ 
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61

Query: 99  PSVLRACSSLGDLGSGE-KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
            S++ AC   G +  G  +VH  +IKCG   D  + TS+L  YG FG + +   VF ++ 
Sbjct: 62  ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             ++VSW+S++  Y  N  V E + ++  + R+GV  +   M ++  +CG L        
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           + G V++  +     + NS I M+  C  +  A   F  +++R T SW ++I+    +G 
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +K+LE F +M     + + IT+  +L  C     LR G+ +H  +++ G+      +  
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNV-CVCN 300

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           +L+  Y++ GK  + E V H + ER+++SWN +++ +   G    ALELL++M       
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
           +  +  ++LSAC N+ +L++   +H  VI +       + ++L+ MY K G    A  + 
Sbjct: 361 NYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA-CSNIGQL 515
           + +  +  V WN++I G   N     AI  F+ +    + ++ +T +  + A  S    L
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLL 477

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + G  +H  ++  G   + ++ ++L  MYA+CGDL T+  +FD ++ +N  +W+A++   
Sbjct: 478 DHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSAN 537

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
             +G   +A  L  +M + GI  ++ +F        +   ++EG+   + +   G E + 
Sbjct: 538 AHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESND 597

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
                 +D+  + G+I+  F+++   P   +   W  L++    H
Sbjct: 598 YVLNATMDMYGKCGEIDDVFRIL-PQPRSRSQRSWNILISALARH 641



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 221/439 (50%), Gaps = 7/439 (1%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSK G +  A+  F K+ +R   SW  ++S + R GW+QKA++ F  MLE    P+   
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 300 LITVLGSCAGLGWLREGK-SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
             +++ +C   G + EG   VH  +I+ G+  +  ++G +L+ FY   G ++E + V   
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDV-FVGTSLLHFYGTFGWVAEVDMVFKE 119

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I E NI+SW  L+  YA  G  KE + +  +++  G+  +  ++A+ + +CG +    LG
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            Q+ G VIK        V +SLI M+  C     A  +F+ ++++  + WNS+I     N
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G+  +++  F QM     + D +T    +  C +   L  G+ +H  ++  G+  ++ + 
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L  MY++ G  + A+ VF  M ER+++SW++M+  +  +G    A  L  +ML +   
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            N VTF   L AC    ++E  K     + + G+  +L     +V +  + G +  A ++
Sbjct: 360 TNYVTFTTALSACY---NLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRV 416

Query: 658 IHSMPFPANGSIWGALLNG 676
              MP   +   W AL+ G
Sbjct: 417 CKIMP-DRDEVTWNALIGG 434



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 210/420 (50%), Gaps = 5/420 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+  S  NLR    LH  ++ +GL  +      L+  Y++ G    +  VF   +E D 
Sbjct: 268 LPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDL 327

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  ++ N  +  ++ L  +M++ +   +   + + L AC +L  L   + VH  
Sbjct: 328 ISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAF 384

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I  G   + +I  +++  YG+FG +  A++V   M  RD V+W+++I  + DN + +  
Sbjct: 385 VILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAA 444

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEA-CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           ++ F+ +  EGV  +++T+++L  A       L     IH H++    +++  + +S I 
Sbjct: 445 IEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLIT 504

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY++CGDL ++   F  +  + +++W A++S     G  ++AL+  +KM       +  +
Sbjct: 505 MYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFS 564

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
                     L  L EG+ +H  II+ G     DY+  A ++ Y +CG++ +  +++   
Sbjct: 565 FSVAHAIIGNLTLLDEGQQLHSLIIKHGFESN-DYVLNATMDMYGKCGEIDDVFRILPQP 623

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+  SWN+LIS  AR G  ++A E   +M   GL PD  +  S LSAC + G +  GL
Sbjct: 624 RSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGL 683


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/671 (33%), Positives = 359/671 (53%), Gaps = 5/671 (0%)

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N   EE++ L + M   +  +   ++ +++R C        G KV+   +         +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REG 191
             + L  +  FG L DA  VF KM+ R++ SW+ ++  Y       E + ++H M+   G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V+PD  T   +   CG +  L   + +H HV+R   ++D  + N+ I MY KCGD+ SA 
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F ++ +R   SW AMIS Y  +G   + LE F  M  +  +P+L+TL +V+ +C  LG
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
             R G+ +H  +I  G   +      +L + Y   G   E EK+   +  ++I+SW  +I
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCN-SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S Y    +  +A++    M    + PD  +VA+ LSAC  +G L  G+++H   IK    
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 432 DE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
               V ++LI+MYSKC   + A  +F  I +K+V+ W S+I G   N    EA+    QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            +  L+ + +T   A+ AC+ IG L  GK +H  ++  GV  D ++  AL DMY +CG +
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
            TA   F+S  +++V SW+ ++  Y   GQ +    LF +M+ S ++P+E+TF+++L  C
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           S S  V +G  YF+ M  +GV P+L+HYAC+VDLL R+G+++ A K I  MP   + ++W
Sbjct: 609 SKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           GALLN CRIH +ID+ +   + +        GYY LL N+YA+ G W E  KVR +M+  
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728

Query: 731 GLKKVPGYSTI 741
           GL    G S +
Sbjct: 729 GLTVDAGCSWV 739



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 164/547 (29%), Positives = 292/547 (53%), Gaps = 6/547 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FI 97
           +   G+L  +  VF    E + F W VL+  Y    +F+E++ LYH+M+       + + 
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +P VLR C  + DL  G++VH  +++ G++ D  +  +++  Y + G +  AR +FD+M 
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RD++SW+++I+ YF+N    EGL++F +M    V+PD +T+ S+  AC  L   R  R 
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH +V+     +D  + NS   MY   G    AE+ F ++E++   SWT MIS Y  +  
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             KA++++  M +   +P+ IT+  VL +CA LG L  G  +H   I+  +   Y  +  
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL-ISYVIVAN 437

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            LI  Y++C  + +   + H I  +N++SW  +I+         EAL  L QM+   L P
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQP 496

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           ++ ++ ++L+AC  +G+L  G +IH HV++     D+F+ ++L+DMY +CG  N A+  F
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 556

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
              Q+K V  WN ++ G+ + G     + LF +M  + +  DE+TF++ +  CS    + 
Sbjct: 557 NS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVR 615

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCY 575
           +G     K+  YGV  ++     + D+  + G+LQ A +    M    +   W A+++  
Sbjct: 616 QGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675

Query: 576 GMHGQLN 582
            +H +++
Sbjct: 676 RIHHKID 682



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 207/420 (49%), Gaps = 6/420 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  +  L R   +H H++  G   D      LI  Y + G ++S+RL+FD     D
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N    E + L+  M             SV+ AC  LGD   G  +H 
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I  GF  D  +  S+   Y   G   +A K+F +M  +D+VSW+++I+ Y  N    +
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  +  M ++ V+PD +T+ ++  AC  L  L     +H   ++ ++     + N+ I 
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKC  +  A   F  I ++   SWT++I+    +    +AL  F++ +++  +PN IT
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAIT 500

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L   L +CA +G L  GK +H  ++R G+G + D+L  AL++ Y  CG+M+      ++ 
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLD-DFLPNALLDMYVRCGRMNTAWSQFNS- 558

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++++ SWN+L++ Y+ +G     +EL  +M    + PD  +  S L  C     ++ GL
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 198/438 (45%), Gaps = 38/438 (8%)

Query: 11  RKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           R+L R +HA+++ TG   D      L + Y   GS R +  +F   +  D   W  +I  
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y +N   +++I  Y  M ++          +VL AC++LGDL +G ++H   IK      
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
            ++  +++  Y +  C+D A  +F  +  ++V+SW+SIIA    N    E L +F   ++
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 491

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             ++P+ +T+ +   AC  + +L   + IH HVLR  + +D  L N+ + MY +CG + +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F   +K+  TSW  +++ Y+  G     +E F +M++ +  P+ IT I++L  C+ 
Sbjct: 552 AWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
              +R+G     ++   G+ P   +    +++     G++ E  K I             
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYA-CVVDLLGRAGELQEAHKFI------------- 656

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
                                Q   + PD     + L+AC     + LG     H+ ++D
Sbjct: 657 ---------------------QKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELD 695

Query: 430 CKDEFVQSSLIDMYSKCG 447
            K       L ++Y+ CG
Sbjct: 696 KKSVGYYILLCNLYADCG 713



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G   NG   EA+ L + M    + +DE  F+  ++ C      E+G  V+   +S     
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            + +  A   M+ + G+L  A  VF  MSERN+ SW+ ++  Y   G  ++A  L+ +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187

Query: 593 -DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
              G+KP+  TF  +L  C     +  GK     +  +G E D+     ++ +  + GD+
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 652 EGAFKMIHSMPFPANGSIWGALLNG 676
           + A  +   MP     S W A+++G
Sbjct: 248 KSARLLFDRMPRRDIIS-WNAMISG 271


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/646 (33%), Positives = 366/646 (56%), Gaps = 6/646 (0%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +LRA  +   L  G+ +H +++  G   D  +  +++  Y      D A+ VFD + +  
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68

Query: 161 VVSW-SSIIASYFDNADVSEGLKMFHS-MVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
            +S  + ++A Y  N    E L +F   M    ++PD  T  S+ +ACG L  +   + I
Sbjct: 69  EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  +++  + +D  +G+S + MY+KC +   A + F ++  +    W  +ISCY +SG F
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKF 188

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++AL  F  M     EP+ +T+ T + SCA L  L  G+ +H +++  G   +  ++  A
Sbjct: 189 EEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMD-SFVSAA 247

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L++ Y +CG++    +V   +  + +++WN +I+ Y  KG     ++L  +M + G+ P 
Sbjct: 248 LVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPT 307

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
             ++ S+L AC     L  G  +HG++I+   + D F+ SSL+D+Y KCG    A  +F+
Sbjct: 308 LTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFK 367

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            + + + V WN MI G+   G   +A+ LF +M  + +E D +TF + + ACS +  LEK
Sbjct: 368 LMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEK 427

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H+ ++   +  +  +  AL DMYAKCG ++ A  VF  + ER++VSW++MI  YG 
Sbjct: 428 GREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGS 487

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG++ +A  LF +ML S +KP+ VTF+ IL ACSH+G V++G ++FN M  ++G+ P ++
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIE 547

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMP-FPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           HY+C++ LL R+G +  A++++ S P    +  +   L + CR+HK +D+   I + L  
Sbjct: 548 HYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLID 607

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +D+  Y +LSN+YA  G WDE   VRS M+  GLKK PG S I
Sbjct: 608 KDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWI 653



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 173/602 (28%), Positives = 306/602 (50%), Gaps = 10/602 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL R+  N + L +   LH  ++  GL  D      LI  Y        ++ VFD  + 
Sbjct: 7   IPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIEN 66

Query: 58  P-DSFMWAVLIKCYMWNNFFEESILLYHK-MIREQATISNFIYPSVLRACSSLGDLGSGE 115
           P +  +   L+  Y  N  ++E++ L+ K M        ++ YPSVL+AC  L  +  G+
Sbjct: 67  PFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQ 126

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H  ++K G   D V+ +S++  Y +    + A K+FD+M  +DV  W+++I+ Y+ + 
Sbjct: 127 MIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSG 186

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E L+ F  M R G EPD VT+ +   +C  L  L   R IH  ++    ++D  +  
Sbjct: 187 KFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSA 246

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY KCG L  A   F ++  +   +W +MI+ Y   G     ++ F +M     +P
Sbjct: 247 ALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKP 306

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
            L TL + L +C+    L EGK VH  IIR  + P+  +L  +L++ Y +CGK+   E +
Sbjct: 307 TLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDI-FLNSSLMDLYFKCGKVESAETI 365

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              + +   +SWN++IS Y  +G   +AL L  +M    + PD+ +  S L+AC  + +L
Sbjct: 366 FKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAAL 425

Query: 416 QLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G +IH  +++ +   +E V  +L+DMY+KCG    A+ +F+ + ++ +V W SMI  +
Sbjct: 426 EKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAY 485

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKD 533
             +G   EA+ LF +M  + ++ D VTFL  + ACS+ G ++ G +  +++I+ YG+   
Sbjct: 486 GSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPR 545

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           I   + L  +  + G L  A  +  S  E   +    S +     +H  L+    + + +
Sbjct: 546 IEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENL 605

Query: 592 LD 593
           +D
Sbjct: 606 ID 607



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD    +  ++A  N   L++GK +H K+++ G++ D+Y+   L  +Y  C     A+ V
Sbjct: 1   MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60

Query: 557 FDSMSERNVVSW-SAMIDCYGMHGQLNDAASLF-KQMLDSGIKPNEVTFMNILWACSHSG 614
           FD +     +S  + ++  Y  +   ++A  LF K M    +KP+  T+ ++L AC    
Sbjct: 61  FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            V  G+     +   G+  D+   + +V + ++  + E A K+   MP
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMP 168


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/649 (33%), Positives = 366/649 (56%), Gaps = 8/649 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S+L+   +   L S +++H  +I  G    D I++ ++ TY   G + +ARK+FD++ 
Sbjct: 24  YQSLLKHYGAAQSLTSTKQLHAHLITSGLLSID-IRSVLVATYAHCGYVHNARKLFDELR 82

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPAR 216
            R  + ++ +I  Y    D  E +K+F  M+  +   PD  T   + +AC EL  +   R
Sbjct: 83  QRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGR 142

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            +HG  L  K      + NS + MY  CG++  A + F  ++++   SW  MI+ Y ++G
Sbjct: 143 VLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNG 202

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           +   AL  F +M++   E +  ++++VL +C  L  L  G+ VH  +  K +G +   + 
Sbjct: 203 FANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI--VS 260

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL++ YA+CG M E   V   + ER+++SW  +I+ Y   G +K AL L   MQ  GL 
Sbjct: 261 NALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLR 320

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
           P+S ++A  L AC ++ +L+ G  +HG V+K     E  V++SLIDMY+KC    L++ +
Sbjct: 321 PNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSV 380

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F R  +K  V WN+++ G   N  + EAI LF +M +  +E++  T  + + A   +  L
Sbjct: 381 FTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADL 440

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM--SERNVVSWSAMID 573
           +    ++  L+  G   +I + T+L D+Y+KCG L++A ++F+++    +++  WS +I 
Sbjct: 441 QPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIA 500

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            YGMHG    A SLFKQM+ SG+KPN+VTF ++L +CSH+G V++G + F  M +     
Sbjct: 501 GYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTI 560

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P+  HY CMVDLL R+G ++ A+ +I +MPF    ++WGALL  C +H+ +++ +   + 
Sbjct: 561 PNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARW 620

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L      + G Y LL+ +YA  G W++   VR  M+  GL+K P +S I
Sbjct: 621 LFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 178/656 (27%), Positives = 325/656 (49%), Gaps = 43/656 (6%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           + +  +L    +LHAHL+ +GL       + L+ +YA  G + ++R +FD  ++  + ++
Sbjct: 31  YGAAQSLTSTKQLHAHLITSGL-LSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLY 89

Query: 64  AVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
             +IK Y+    + E++ ++ +M+  +     N+ YP V++ACS L  +  G  +HG  +
Sbjct: 90  NFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTL 149

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
              F     +  S+L  Y   G +++ARKVFD M  + VVSW+++I  YF N   +  L 
Sbjct: 150 VSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALV 209

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F+ MV  GVE D  +++S+  ACG L  L   R +HG ++  K+     + N+ + MY+
Sbjct: 210 VFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-LVEEKVLGKKIVSNALVDMYA 268

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG +  A   F  + +R   SWT+MI+ Y  +G  + AL  F  M      PN +T+  
Sbjct: 269 KCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIAL 328

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +CA L  L++G+ +H  ++++ +  E   +  +LI+ YA+C  +     V      +
Sbjct: 329 ILLACASLNNLKDGRCLHGWVMKQRLYSEVA-VETSLIDMYAKCNCLGLSFSVFTRTSRK 387

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
             + WN L+S      ++ EA+ L  +M   G+  ++ +  S L A G +  LQ    I+
Sbjct: 388 KTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNIN 447

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGN 479
            ++++        V +SLID+YSKCG    A+ +F  I    + + +W+ +I G+  +G+
Sbjct: 448 SYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGH 507

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
              A++LF QM  + ++ ++VTF + +Q+CS+ G ++ G ++   ++             
Sbjct: 508 GETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLK------------ 555

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
                             D  +  N   ++ M+D  G  G++++A  L K M      P 
Sbjct: 556 ------------------DHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTM---PFMPG 594

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGA 654
              +  +L AC    +VE G+    A  +F +EP +  +Y  +  L +  G  E A
Sbjct: 595 HAVWGALLGACVMHENVELGE--VAARWLFELEPGNTGNYVLLAKLYAALGRWEDA 648



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 161/314 (51%), Gaps = 15/314 (4%)

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
           L P +    S L   G   SL    Q+H H+I        ++S L+  Y+ CG+ + A  
Sbjct: 17  LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARK 76

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMDEVTFLTAIQACSNI 512
           LF+ ++Q+  +++N MI  +   G+  EA+ +F +M    +C   D  T+   I+ACS +
Sbjct: 77  LFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCP-DNYTYPFVIKACSEL 135

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             +E G+ +H   +       +++  +L  MY  CG+++ A++VFD+M E++VVSW+ MI
Sbjct: 136 LLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMI 195

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG-V 631
           + Y  +G  N A  +F QM+DSG++ +  + +++L AC +   +E G+      R+ G V
Sbjct: 196 NGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGR------RVHGLV 249

Query: 632 EPDLQHYA----CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
           E  +         +VD+ ++ G ++ A +++       +   W +++NG  ++       
Sbjct: 250 EEKVLGKKIVSNALVDMYAKCGSMDEA-RLVFDNMVERDVVSWTSMINGYILNGDAKSAL 308

Query: 688 TIEKELSVTGTNDN 701
           ++ K + + G   N
Sbjct: 309 SLFKIMQIEGLRPN 322



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK--EP 58
           +P +    +L+ +  ++++L+ +G   +   +T LI+ Y++ GSL S+  +F+T      
Sbjct: 431 LPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQ 490

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
           D F+W+++I  Y  +   E ++ L+ +M++     ++  + SVL++CS  G +  G
Sbjct: 491 DIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDG 546


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/648 (33%), Positives = 356/648 (54%), Gaps = 5/648 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y +++ AC+S+  L  G+K+H  I+K     D V+Q  IL  YG+ G L DARK FD M 
Sbjct: 160 YGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ 219

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+VVSW+ +I+ Y  N   ++ + M+  M++ G  PD +T  S+ +AC     +   R 
Sbjct: 220 LRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQ 279

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HGHV++          N+ I MY++ G ++ A   F  I  +   SW +MI+ + + G+
Sbjct: 280 LHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGY 339

Query: 278 FQKALESFVKMLEVK-EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             +AL  F  M      +PN     +V  +C  L     G+ +H    + G+G    + G
Sbjct: 340 EIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNV-FAG 398

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +L + YA+ G +    +  + I   +++SWN +I+ ++  G   EA+    QM   GLM
Sbjct: 399 CSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLM 458

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLL 455
           PD  +  S L ACG+  ++  G QIH ++IKI   K+  V +SL+ MY+KC   + A+ +
Sbjct: 459 PDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNV 518

Query: 456 FERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           F+ + + + +V WN+++    Q+  + E   LF  M  +  + D +T  T +  C+ +  
Sbjct: 519 FKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELAS 578

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           LE G  VH   +  G+  D+ +   L DMYAKCG L+ A+ VF S    ++VSWS++I  
Sbjct: 579 LEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVG 638

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEP 633
           Y   G  ++A +LF+ M + G++PNEVT++ +L ACSH G VEEG  ++N M I  G+ P
Sbjct: 639 YAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPP 698

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             +H +CMVDLL+R+G +  A   I  M F  + ++W  LL  C+ H  +D+ +   + +
Sbjct: 699 TREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENI 758

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                +++    LLSNI+A  GNW E  ++R++M+  G++KVPG S I
Sbjct: 759 LKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWI 806



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 178/639 (27%), Positives = 314/639 (49%), Gaps = 12/639 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +CT++R L    ++H H+L +    D      ++  Y + GSL+ +R  FDT +  +
Sbjct: 163 LILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRN 222

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W ++I  Y  N    ++I++Y +M++         + S+++AC   GD+  G ++HG
Sbjct: 223 VVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHG 282

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +IK G+D   + Q +++  Y  FG +  A  VF  ++++D++SW+S+I  +       E
Sbjct: 283 HVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIE 342

Query: 180 GLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L +F  M R+G  +P+     S+  AC  L      R IHG   +  +  +   G S  
Sbjct: 343 ALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLC 402

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G L SA R F +IE     SW A+I+ ++ SG   +A+  F +M+     P+ I
Sbjct: 403 DMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGI 462

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T +++L +C     + +G  +H  II+ G+  E      +L+  Y +C  + +   V   
Sbjct: 463 TFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCN-SLLTMYTKCSNLHDAFNVFKD 521

Query: 359 IGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           + E  N++SWN ++S   +   + E   L   M      PD+ ++ + L  C  + SL++
Sbjct: 522 VSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEV 581

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+H   +K     D  V + LIDMY+KCG    A  +F   Q   +V W+S+I G+ Q
Sbjct: 582 GNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQ 641

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIY 535
            G   EA+NLF  M    ++ +EVT+L  + ACS+IG +E+G   ++ + I  G+     
Sbjct: 642 FGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTRE 701

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
             + + D+ A+ G L  A+     M    ++  W  ++     HG ++ A    + +L  
Sbjct: 702 HVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILK- 760

Query: 595 GIKPNEVTFMNILWACSHS-GSVEEGKFYFNAMRIFGVE 632
            + P+    + +L     S G+ +E     N M+  GV+
Sbjct: 761 -LDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQ 798



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 4/313 (1%)

Query: 365 LSWNMLISEYARKGMSKEALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           LS N  I+   ++   +EAL+      +   +  +S +  + + AC ++ SL+ G +IH 
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181

Query: 424 HVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           H++K +C+ + V Q+ +++MY KCG    A   F+ +Q ++VV W  MI G+ QNG   +
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEND 241

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           AI ++ QM  +    D +TF + I+AC   G ++ G+ +H  +I  G    +    AL  
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALIS 301

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI-KPNEV 601
           MY + G +  A  VF  +S ++++SW++MI  +   G   +A  LF+ M   G  +PNE 
Sbjct: 302 MYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEF 361

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            F ++  AC      E G+        FG+  ++     + D+ ++ G +  A +  + +
Sbjct: 362 IFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQI 421

Query: 662 PFPANGSIWGALL 674
             P   S W A++
Sbjct: 422 ESPDLVS-WNAII 433



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 108/199 (54%), Gaps = 8/199 (4%)

Query: 482 EAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           EA++ F+    N  ++++  T+   I AC++I  L+ GK +H  ++    + D+ +   +
Sbjct: 139 EALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHI 198

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            +MY KCG L+ A++ FD+M  RNVVSW+ MI  Y  +GQ NDA  ++ QML SG  P+ 
Sbjct: 199 LNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDP 258

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKM 657
           +TF +I+ AC  +G ++ G+     +   G +  L     ++ + +R G I  A   F M
Sbjct: 259 LTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTM 318

Query: 658 IHSMPFPANGSIWGALLNG 676
           I +    +    W +++ G
Sbjct: 319 ISTKDLIS----WASMITG 333


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/661 (32%), Positives = 361/661 (54%), Gaps = 6/661 (0%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           Y  M +    +  + +PS+ +AC++L     G  +H  ++  G   D  I +S++  Y +
Sbjct: 37  YISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAK 96

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FGC+   RKVFD M  R+VV W++II SY    D+     MF  M   G++P  VT+LSL
Sbjct: 97  FGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSL 156

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
                 +  L     +H  ++    + D  L NS + MY KCG +  A R F  I+ R  
Sbjct: 157 LPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDI 213

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW +++S Y++ G  ++ L+    M     +P+  T  + L + A  G LR GK VH  
Sbjct: 214 VSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGL 273

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +++ G+  +  ++  AL+  Y  C  +    KV  +  E++++ W  +IS   +   + +
Sbjct: 274 MLKDGLNID-QHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADK 332

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
           AL +  QM    + P + ++AS L+AC  +G   +G  IHG+V++     D   Q+SL+ 
Sbjct: 333 ALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVT 392

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY+KC     +  +F ++ +K +V WN+++ G  +NG   + I  F++M  + L  D +T
Sbjct: 393 MYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSIT 452

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             + +QAC + G L +GKW+H+ ++   +   I  +TAL DMY KCG+L+ AQ+ FD M 
Sbjct: 453 VTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCML 512

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           +R++V+WS +I  YG +G+   A   + + L +G++PN V F+++L ACSH G + +G  
Sbjct: 513 QRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLS 572

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            + +M + F + P+L+H AC+VDLLSR+G ++ A+     M    +  + G LL+ CR++
Sbjct: 573 IYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVN 632

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
            R+++ K I +++      D G +  L+N YA    WD   K  + M   GLKK PG+S+
Sbjct: 633 GRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSS 692

Query: 741 I 741
           I
Sbjct: 693 I 693



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 187/680 (27%), Positives = 331/680 (48%), Gaps = 54/680 (7%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LF++CTNL   +    LH  ++V GL +D    + LI  YA+ G +   R VFDT  + +
Sbjct: 55  LFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRN 114

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y      + +  ++ +M RE       +  ++L     +  L     +H 
Sbjct: 115 VVPWTTIIGSYSREGDIDIAFSMFKQM-RESGIQPTSV--TLLSLLPGISKLPLLLCLHC 171

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            II  GF+ D  +  S++  YG+ G + DAR++F  +  RD+VSW+S++++Y       E
Sbjct: 172 LIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEE 231

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++  +M  E ++PD  T  S   A      LR  + +HG +L+  + ID  + ++ +V
Sbjct: 232 ILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVV 291

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y +C  L  A + F    ++    WTAMIS   ++    KAL  F +M+E   +P+  T
Sbjct: 292 LYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTAT 351

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L + L +CA LG    G S+H  ++R+G+  +      +L+  YA+C K+ +   + + +
Sbjct: 352 LASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQN-SLVTMYAKCNKLQQSCSIFNKM 410

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++++SWN +++ +A+ G   + +    +M+   L PDS +V S L ACG+ G+L  G 
Sbjct: 411 VEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGK 470

Query: 420 QIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            IH  V++   I C     +++L+DMY KCG    A   F+ + Q+ +V W+++I G+  
Sbjct: 471 WIHNFVLRSSLIPCI--MTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGF 528

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG    A+  + +     +E + V F++ + ACS+ G + KG  ++  +      KD   
Sbjct: 529 NGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMT-----KDF-- 581

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                             R+  ++  R  V     +D     G++++A S +K M     
Sbjct: 582 ------------------RMSPNLEHRACV-----VDLLSRAGKVDEAYSFYKMMFK--- 615

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP----DLQHYACMVDLLSRSGDIE 652
           +P+ V    +L AC  +G VE GK    A  +F ++P    +    A     +SR   +E
Sbjct: 616 EPSIVVLGMLLDACRVNGRVELGKVI--ARDMFELKPVDPGNFVQLANSYASMSRWDGVE 673

Query: 653 GAFKMIHSM---PFPANGSI 669
            A+  + S+    +P   SI
Sbjct: 674 KAWTQMRSLGLKKYPGWSSI 693



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 279/540 (51%), Gaps = 6/540 (1%)

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           S++S+++         + L+ + SM +   + D  T  SL +AC  L       S+H  V
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 223 LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
           +   +  D  +G+S I  Y+K G +    + F  + KR    WT +I  Y+R G    A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
             F +M E   +P  +TL+++L    G+  L     +HC II  G   +   L  +++  
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLL---PGISKLPLLLCLHCLIILHGFESDLA-LSNSMVNM 191

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           Y +CG++++  ++  +I  R+I+SWN L+S Y++ G ++E L+LL  M+   + PD  + 
Sbjct: 192 YGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
            S+LSA    G L+LG  +HG ++K     D+ V+S+L+ +Y +C   + AY +F+   +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K VVMW +MI G  QN  + +A+ +F+QM  + ++    T  + + AC+ +G  + G  +
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  ++  G+  DI    +L  MYAKC  LQ +  +F+ M E+++VSW+A++  +  +G L
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACM 641
           +     F +M  S ++P+ +T  ++L AC  +G++ +GK+  N +    + P +     +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           VD+  + G++E A K    M    +   W  L+ G   + + ++      E   TG   N
Sbjct: 492 VDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPN 550



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 3/208 (1%)

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            + E I       +NS++      G   + +  +  M     ++D  TF +  +AC+N+ 
Sbjct: 4   FIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLN 63

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
               G  +H  ++  G+  D YI ++L   YAK G +   ++VFD+M +RNVV W+ +I 
Sbjct: 64  LFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIG 123

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y   G ++ A S+FKQM +SGI+P  VT +++L   S    +         + + G E 
Sbjct: 124 SYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGIS---KLPLLLCLHCLIILHGFES 180

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           DL     MV++  + G I  A ++  S+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFQSI 208


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 239/750 (31%), Positives = 390/750 (52%), Gaps = 31/750 (4%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-- 57
           L ++C +L  L     +HA ++  GL  DP  +T LI  Y + G L S+  VFD   E  
Sbjct: 61  LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 120

Query: 58  ---PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
              PD  +W  +I  Y     FEE +  + +M                     L    +G
Sbjct: 121 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRM-------------------QELSWYMAG 161

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFD 173
            ++HG II+  F+ D  ++T+++  Y       +A  +F K+ +R ++V+W+ +I  + +
Sbjct: 162 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 221

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           N    + L+++     E  +    +      AC     L   R +H  V++   + D  +
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
             S + MY+K G +  A++ F ++  +      AMIS +  +G    AL  + KM   + 
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 341

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             +  T+ ++L  C+ +G    G++VH ++I++ M      +  AL+  Y +CG   + +
Sbjct: 342 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVA-IQSALLTMYYKCGSTEDAD 400

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            V + + ER++++W  +I+ + +    K+AL+L   M+  G+  DS  + S +SA   + 
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 460

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           +++LG  IHG  IK   + D FV  SL+DMYSK GF   A ++F  +  K++V WNSMI 
Sbjct: 461 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 520

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            +  NG    +INL  Q+  +   +D V+  T + A S++  L KGK +H   I   +  
Sbjct: 521 CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPS 580

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+ ++ AL DMY KCG L+ AQ +F++M  RN+V+W++MI  YG HG   +A  LFK+M 
Sbjct: 581 DLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMK 640

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDI 651
            S   P+EVTF+ ++ +CSHSG VEEG   F  MRI +GVEP ++HYA +VDLL R+G +
Sbjct: 641 RSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRL 700

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           + A+  I  MP  A+ S+W  LL  CR H+ +++ + +   L          Y  L N+Y
Sbjct: 701 DDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLY 760

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            E   WD    +R+ M+  GLKK PG S I
Sbjct: 761 GEVEMWDRAANLRASMKGRGLKKSPGCSWI 790



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 183/641 (28%), Positives = 307/641 (47%), Gaps = 32/641 (4%)

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           IK  +    + +++ L+ K      T + F +PS+L+ C+SL +L  G  +H  I+  G 
Sbjct: 27  IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 86

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKM-----TSRDVVSWSSIIASYFDNADVSEGL 181
             D  I TS++  Y + G L  A +VFDKM     ++ D+  W+ +I  YF      EGL
Sbjct: 87  QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 146

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
             F  M                    EL      R IHG+++R   + D  L  + I MY
Sbjct: 147 AQFCRM-------------------QELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 187

Query: 242 SKCGDLLSAERTFVKIEKRCT-TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI-- 298
           S C   + A   F K+E R    +W  MI  +  +G ++K+LE +   L   E   L+  
Sbjct: 188 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS--LAKNENCKLVSA 245

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           +      +C+    L  G+ VHC +I+     +  Y+  +L+  YA+ G + + +KV   
Sbjct: 246 SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD-PYVCTSLLTMYAKSGSVEDAKKVFDQ 304

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + ++ +   N +IS +   G + +AL L  +M+      DSF+++S LS C  VGS   G
Sbjct: 305 VLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFG 364

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +H  VIK   +    +QS+L+ MY KCG    A  +F  ++++ VV W SMI GF QN
Sbjct: 365 RTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQN 424

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
               +A++LF  M    ++ D     + I A   +  +E G  +H   I  G+  D+++ 
Sbjct: 425 RRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVA 484

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L DMY+K G  ++A+ VF SM  +N+V+W++MI CY  +G    + +L  Q+L  G  
Sbjct: 485 CSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFY 544

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            + V+   +L A S   ++ +GK          +  DLQ    ++D+  + G ++ A  +
Sbjct: 545 LDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLI 604

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
             +MP   N   W +++ G   H   +    + KE+  + T
Sbjct: 605 FENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSET 644



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 260/536 (48%), Gaps = 32/536 (5%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           +RK +    +    S +S I +       S+ L++        +     T  SL + C  
Sbjct: 8   SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCT----T 263
           L +L   R+IH  ++   ++ D  +  S I MY KCG L SA + F K+ E R +    T
Sbjct: 68  LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
            W  +I  Y + G F++ L  F +M E                   L W   G+ +H  I
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQE-------------------LSWYMAGRQIHGYI 168

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLISEYARKGMSKE 382
           IR  M     YL  ALI  Y+ C +  E   +   +  R NI++WN++I  +   GM ++
Sbjct: 169 IRN-MFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEK 227

Query: 383 ALEL--LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSL 439
           +LEL  L + +   L+  SF+ A   +AC +   L  G Q+H  VIK++ +D+ +V +SL
Sbjct: 228 SLELYSLAKNENCKLVSASFTGA--FTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSL 285

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           + MY+K G    A  +F+++  K V + N+MI  F  NG + +A+ L+++M      +D 
Sbjct: 286 LTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDS 345

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            T  + +  CS +G  + G+ VH ++I   ++ ++ I +AL  MY KCG  + A  VF +
Sbjct: 346 FTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 405

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
           M ER+VV+W +MI  +  + +  DA  LF+ M   G+K +     +++ A     +VE G
Sbjct: 406 MKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELG 465

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
                     G+E D+     +VD+ S+ G  E A  +  SMP   N   W ++++
Sbjct: 466 HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP-NKNLVAWNSMIS 520


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/739 (29%), Positives = 389/739 (52%), Gaps = 8/739 (1%)

Query: 7    CTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            CT ++ L     +H  ++ +G   D   +  LI  YA  G+L  +R +FD+  E +  +W
Sbjct: 266  CTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIW 325

Query: 64   AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
              +I  Y  N    E+  ++ +M++     +   + S++  C +  +   G+ +H  ++K
Sbjct: 326  NSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMK 385

Query: 124  CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
               D    + T++L  Y + G L+ A  +F +M  R+++SW+S+I+ Y  N      +  
Sbjct: 386  YRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDA 445

Query: 184  FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
            F  M  EG +PD ++++++  AC +L ++   ++ H    R++   +  + N+ +  YS 
Sbjct: 446  FCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSD 505

Query: 244  CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
            CG L S+ + F K+  R   SW  +IS    +G  +KA+    KM + K E +L+TLI++
Sbjct: 506  CGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISI 565

Query: 304  LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
            +  C     L +G ++H   I+ G   +   +  ALI  Y  CG ++  + +   +  R+
Sbjct: 566  IPICRVAENLIQGMTLHGYAIKTGFACDVSLVN-ALISMYFNCGDINAGKFLFEVMPWRS 624

Query: 364  ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            I+SWN LI+ Y    +  E +    QM   G  P+  ++ + L +C    +L  G  IH 
Sbjct: 625  IVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCR---TLLQGKSIHA 681

Query: 424  HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
              ++     E  + +SLI MY++    N    LFE   ++ + +WN+++  + Q  N+ E
Sbjct: 682  FAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKE 741

Query: 483  AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            ++  F ++    +E D +TFL+ I AC  +  L     V   +I  G  K I I  AL D
Sbjct: 742  SVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALID 801

Query: 543  MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
            ++A+CG++  A+++F+ +S ++ VSWS MI+ YG+HG    A +L  QM  SG+KP+ +T
Sbjct: 802  LFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGIT 861

Query: 603  FMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            + ++L ACSH G +++G   FN+M   GV   ++HYACMVDLL R+G +  A+  +  +P
Sbjct: 862  YASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLP 921

Query: 663  FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
               + S+  +LL  C IH  + + + I   L      ++G Y +L NIYA  G W +  +
Sbjct: 922  CKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANR 981

Query: 723  VRSIMEVTGLKKVPGYSTI 741
            VRS ME   L+K+PG+S +
Sbjct: 982  VRSDMEERQLRKIPGFSLV 1000



 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 186/675 (27%), Positives = 350/675 (51%), Gaps = 8/675 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF  C N+  L  L + L+V  L  D       I S   +G+   +   F+  ++P  F+
Sbjct: 63  LFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFL 122

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
             ++I+    +  FE+ + +Y K         +F +P V++AC++LG +   E VH  ++
Sbjct: 123 QNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVL 182

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           +  F+++ VIQT+++  Y + G +  AR V DK++  D+V+W+++I+ Y  N    E  +
Sbjct: 183 RTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFE 242

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +   +   G++P+  T  S+   C  +  L   +SIHG V++     D  L  + I MY+
Sbjct: 243 VLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYA 302

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
             G+L  A   F    ++    W +MIS Y ++    +A + F +ML+   +PN++T ++
Sbjct: 303 GGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVS 362

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           ++  C        GKS+H  +++  +  +   +  AL+  YA+ G ++  + + + +  R
Sbjct: 363 IIPCCENSANFWYGKSLHAHVMKYRLDSQLS-VATALLSMYAKLGDLNSADFIFYQMPRR 421

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           N+LSWN +IS Y   G+ + +++    MQ  G  PD+ S+ + LSAC  + ++ LG   H
Sbjct: 422 NLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAH 481

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
               + +      + ++L+  YS CG  + ++ LF+++  ++ + WN++I G   NG++ 
Sbjct: 482 AFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTK 541

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           +A+ L H+M    +E+D VT ++ I  C     L +G  +H   I  G   D+ +  AL 
Sbjct: 542 KAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALI 601

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
            MY  CGD+   + +F+ M  R++VSW+A+I  Y  H   N+  + F QM+  G KPN V
Sbjct: 602 SMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYV 661

Query: 602 TFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           T +N+L +C    ++ +GK  +  A+R  GV  +      ++ + +R  +I  +F  +  
Sbjct: 662 TLLNLLPSCR---TLLQGKSIHAFAVRT-GVIVETPIITSLISMYARFENI-NSFIFLFE 716

Query: 661 MPFPANGSIWGALLN 675
           M    + ++W A+++
Sbjct: 717 MGGKEDIALWNAIMS 731



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 198/447 (44%), Gaps = 38/447 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+ R   NL +   LH + + TG   D      LI  Y   G + + + +F+       
Sbjct: 566 IPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSI 625

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  LI  Y ++    E +  + +MIRE    +   Y ++L    S   L  G+ +H  
Sbjct: 626 VSWNALITGYRFHYLQNEVMASFCQMIREGQKPN---YVTLLNLLPSCRTLLQGKSIHAF 682

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ G   +  I TS++  Y  F  ++    +F+     D+  W++I++ Y    +  E 
Sbjct: 683 AVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKES 742

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +  F  ++   VEPD++T LSL  AC +L SL  + S+  +V+++       + N+ I +
Sbjct: 743 VTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDL 802

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           +++CG++  A++ F  +  +   SW+ MI+ Y   G  + AL    +M     +P+ IT 
Sbjct: 803 FARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITY 862

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            +VL +C+  G++ +G  +   ++ +G+        P  +E YA                
Sbjct: 863 ASVLSACSHGGFIDQGWMIFNSMVEEGV--------PRRMEHYA---------------- 898

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
                    ++    R G   EA + + ++      P    + S L AC   G+++LG +
Sbjct: 899 --------CMVDLLGRTGQLNEAYDFVEKLPC---KPSVSLLESLLGACIIHGNVKLGEK 947

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCG 447
           I   + ++D K+      L ++Y+  G
Sbjct: 948 ISSLLFELDPKNSGSYVMLYNIYAAAG 974


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/631 (34%), Positives = 351/631 (55%), Gaps = 12/631 (1%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  ++  G  +   I T ++  Y   G +  +R  FD++  +DV +W+S+I++Y  N  
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 177 VSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
             E +  F+ ++    + PDF T   + +ACG L      R IH    +   + +  +  
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAA 254

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S I MYS+ G    A   F  +  R   SW AMIS   ++G   +AL+   +M     + 
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEK 354
           N +T++++L  C  LG +     +H  +I+ G+  E+D ++  ALI  YA+ G + +  K
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL--EFDLFVSNALINMYAKFGNLEDARK 372

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
               +   +++SWN +I+ Y +      A    V+MQ  G  PD  ++ S  S       
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 415 LQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            +    +HG +++     +D  + ++++DMY+K G  + A+ +FE I  K V+ WN++I 
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLIT 492

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEM--DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           G+ QNG + EAI ++ +M   C E+  ++ T+++ + A +++G L++G  +H ++I   +
Sbjct: 493 GYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNL 551

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             D+++ T L D+Y KCG L  A  +F  + + + V+W+A+I C+G+HG       LF +
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 611

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           MLD G+KP+ VTF+++L ACSHSG VEEGK+ F  M+ +G++P L+HY CMVDLL R+G 
Sbjct: 612 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGY 671

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
           +E A+  I  MP   + SIWGALL  CRIH  I++ K     L    + + GYY LLSNI
Sbjct: 672 LEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNI 731

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           YA  G W+   KVRS+    GLKK PG+STI
Sbjct: 732 YANVGKWEGVDKVRSLARERGLKKTPGWSTI 762



 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 199/659 (30%), Positives = 339/659 (51%), Gaps = 43/659 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF S T       LHA L+V G       STRL+  YA +G +  SR  FD   + D + 
Sbjct: 125 LFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYT 184

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I  Y+ N  F E+I  +++++       +F  +P VL+AC +L D   G ++H   
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWA 241

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            K GF  +  +  S++  Y  FG    AR +FD M  RD+ SW+++I+    N + ++ L
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +   M  EG++ +FVT++S+   C +L  +  A  IH +V++  ++ D  + N+ I MY
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +K G+L  A + F ++      SW ++I+ Y ++     A   FVKM     +P+L+TL+
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLV 421

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++    A     +  +SVH  I+R+G   E   +G A+++ YA+ G +    KV   I  
Sbjct: 422 SLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILV 481

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQ 420
           ++++SWN LI+ YA+ G++ EA+E+   M+    ++P+  +  S L A  +VG+LQ G++
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMR 541

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IHG VIK +   D FV + LID+Y KCG    A  LF ++ Q+S V WN++I     +G+
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGH 601

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
           + + + LF +M    ++ D VTF++ + ACS+ G +E+GKW    +  YG++  +     
Sbjct: 602 AEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK---- 657

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
                                       +  M+D  G  G L  A    K M    ++P+
Sbjct: 658 ---------------------------HYGCMVDLLGRAGYLEMAYGFIKDM---PLQPD 687

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE-PDLQHYACMVDLLSRSGDIEGAFKM 657
              +  +L AC   G++E GKF  +  R+F V+  ++ +Y  + ++ +  G  EG  K+
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASD--RLFEVDSKNVGYYVLLSNIYANVGKWEGVDKV 744



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 248/487 (50%), Gaps = 15/487 (3%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C  L    R+H      G  ++   +  LI  Y+  G    +R +FD     D  
Sbjct: 223 PVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 282

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I   + N    +++ +  +M  E   ++     S+L  C  LGD+ +   +H  +
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK G + D  +  +++  Y +FG L+DARK F +M   DVVSW+SIIA+Y  N D     
Sbjct: 343 IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAH 402

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVM 240
             F  M   G +PD +T++SLA    +    + +RS+HG ++RR  +  D  +GN+ + M
Sbjct: 403 GFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDM 462

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
           Y+K G L SA + F  I  +   SW  +I+ Y ++G   +A+E +  M E KE  PN  T
Sbjct: 463 YAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGT 522

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++L + A +G L++G  +H ++I+  +  +  ++   LI+ Y +CG++ +   + + +
Sbjct: 523 WVSILPAYAHVGALQQGMRIHGRVIKTNLHLDV-FVATCLIDVYGKCGRLVDAMSLFYQV 581

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG- 418
            + + ++WN +IS +   G +++ L+L  +M   G+ PD  +  S LSAC + G ++ G 
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641

Query: 419 -----LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMIC 472
                +Q +G  IK   K       ++D+  + G+  +AY   + +  Q    +W +++ 
Sbjct: 642 WCFRLMQEYG--IKPSLKH---YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLG 696

Query: 473 GFYQNGN 479
               +GN
Sbjct: 697 ACRIHGN 703



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 5/160 (3%)

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
            K +H  L+  G  + I+I T L ++YA  GD+  ++  FD + +++V +W++MI  Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 578 HGQLNDAASLFKQ-MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
           +G  ++A   F Q +L S I+P+  TF  +L AC   G++ +G+         G + ++ 
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVF 251

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             A ++ + SR G    A  +   MPF   GS W A+++G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGS-WNAMISG 290



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  R+H  ++ T LH D   +T LI+ Y + G L  +  +F    +  S
Sbjct: 527 LPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 586

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
             W  +I C+  +   E+++ L+ +M+ E     +  + S+L ACS  G +  G+
Sbjct: 587 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/578 (35%), Positives = 331/578 (57%), Gaps = 5/578 (0%)

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           ++  Y  ++ +   L  F  M  + V P       L + CG+   L+  + IHG V+   
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              +       + MY+KC  +  A   F ++ +R    W  MIS Y ++G+ + AL   +
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           +M E    P+ IT++++L + A    LR G +VH  ++R G     + +  AL++ Y++C
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVN-VSTALVDMYSKC 179

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G +S    +   +  R ++SWN +I  Y + G ++ A+ +  +M   G+ P + +V  +L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 407 SACGNVGSLQLGLQIHGHV--IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
            AC ++G L+ G  +H  V  +K+D  D  V +SLI MYSKC   ++A  +F+ ++ K++
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLD-SDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V WN+MI G+ QNG   EA+N F +M    ++ D  T ++ I A + +    + KW+H  
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
           +I   + K++++ TAL DMYAKCG + TA+++FD M+ R+V++W+AMID YG HG    +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVD 643
             LFK+M    IKPN++TF+  L ACSHSG VEEG  +F +M+  +G+EP + HY  MVD
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY 703
           LL R+G +  A+  I  MP     +++GA+L  C+IHK +D+ +    E+     +D GY
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGY 538

Query: 704 YTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + LL+NIYA    W +  KVR+IME +GL+K PG S +
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLV 576



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 176/644 (27%), Positives = 314/644 (48%), Gaps = 61/644 (9%)

Query: 66  LIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           ++K Y  ++  + ++  + +M  +  +  + NF Y  +L+ C    DL  G+++HG +I 
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTY--LLKLCGDNSDLKRGKEIHGSVIT 58

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            GF  +    T ++  Y +   ++DA  +FD+M  RD+V W+++I+ Y  N      L +
Sbjct: 59  SGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALML 118

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
              M  EG  PD +T++S+  A  +   LR   ++HG+VLR   +    +  + + MYSK
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG +  A   F  ++ R   SW +MI  Y +SG  + A+  F KML+   +P  +T++  
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CA LG L  GK VH  + +  +  +   +  +LI  Y++C ++     +   +  + 
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMN-SLISMYSKCKRVDIAADIFKNLRNKT 297

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SWN +I  YA+ G   EAL    +MQ+  + PDSF++ S + A   +   +    IHG
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHG 357

Query: 424 HVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
            VI+  +D K+ FV ++L+DMY+KCG  + A  LF+ +  + V+ WN+MI G+  +G   
Sbjct: 358 LVIRRFLD-KNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGK 416

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            ++ LF +M    ++ +++TFL A+ ACS+ G +E+G      +     +KD  I+  + 
Sbjct: 417 TSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESM-----KKDYGIEPTMD 471

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
                                     + AM+D  G  G+LN A    ++M    IKP   
Sbjct: 472 -------------------------HYGAMVDLLGRAGRLNQAWDFIQKM---PIKPGIT 503

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            +  +L AC    +V+ G+    A  IF + PD                 +G + ++ + 
Sbjct: 504 VYGAMLGACKIHKNVDLGE--KAAFEIFKLNPD-----------------DGGYHVLLAN 544

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
            + A  S+WG +     I ++  + KT    L   G   + +Y+
Sbjct: 545 IY-ATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYS 587



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 242/476 (50%), Gaps = 8/476 (1%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++L++   +H  ++ +G  ++  A T ++  YA+   +  +  +FD   E D   W  +I
Sbjct: 44  SDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMI 103

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y  N F + +++L  +M  E     +    S+L A +    L  G  VHG +++ GF+
Sbjct: 104 SGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFE 163

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
               + T+++  Y + G +  AR +FD M  R VVSW+S+I  Y  + D    + +F  M
Sbjct: 164 SLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKM 223

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           + EGV+P  VT++    AC +L  L   + +H  V + K+  D  + NS I MYSKC  +
Sbjct: 224 LDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRV 283

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A   F  +  +   SW AMI  Y ++G   +AL +F +M     +P+  T+++V+ + 
Sbjct: 284 DIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPAL 343

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A L   R+ K +H  +IR+ +     ++  AL++ YA+CG +    K+   +  R++++W
Sbjct: 344 AELSIPRQAKWIHGLVIRRFLDKNV-FVMTALVDMYAKCGAIHTARKLFDMMNARHVITW 402

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +I  Y   G+ K ++EL  +M+   + P+  +   +LSAC + G ++ GL      +K
Sbjct: 403 NAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFF-ESMK 461

Query: 428 IDCKDEFVQS---SLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQN 477
            D   E       +++D+  + G  N A+   +++  K  + ++ +M+  C  ++N
Sbjct: 462 KDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKN 517



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 177/352 (50%), Gaps = 2/352 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR    +H ++L  G       ST L++ Y++ GS+  +R++FD       
Sbjct: 138 LPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTV 197

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y+ +   E ++L++ KM+ E    +N      L AC+ LGDL  G+ VH  
Sbjct: 198 VSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKL 257

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           + +   D D  +  S++  Y +   +D A  +F  + ++ +VSW+++I  Y  N  V+E 
Sbjct: 258 VDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEA 317

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  F  M    ++PD  TM+S+  A  EL   R A+ IHG V+RR +  +  +  + + M
Sbjct: 318 LNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDM 377

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A + F  +  R   +W AMI  Y   G  + ++E F +M +   +PN IT 
Sbjct: 378 YAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITF 437

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSE 351
           +  L +C+  G + EG      + +  G+ P  D+ G A+++     G++++
Sbjct: 438 LCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYG-AMVDLLGRAGRLNQ 488


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/743 (30%), Positives = 372/743 (50%), Gaps = 49/743 (6%)

Query: 3   LFRSCT----NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           + R C+    + R + ++HA  + +G          LI+ Y + G L S++ VF+  K  
Sbjct: 169 VLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKAR 228

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           DS  W  +I     N + EE++LL+ ++              VL AC+ +     G+++H
Sbjct: 229 DSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLH 274

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++K GF  +  +  +++  Y   G L  A ++F  M+ RD VS++S+I+       ++
Sbjct: 275 GLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYIN 334

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L +F  M  +  +PD VT+ SL  AC  + +L   +  H + ++  +  D  +  S +
Sbjct: 335 RALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLL 394

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y KC D+ +A   F+               CY +     K+ + F +M      PN  
Sbjct: 395 DLYVKCSDIKTAHEFFL---------------CYGQLDNLNKSFQIFTQMQIEGIVPNQF 439

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  ++L +C  LG    G+ +H Q+++ G      Y+   LI+ YA+ GK+    K+   
Sbjct: 440 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV-YVSSVLIDMYAKHGKLDHALKIFRR 498

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E +++SW  +I+ Y +     EAL L  +MQ  G+  D+   AS++SAC  + +L  G
Sbjct: 499 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 558

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            QIH         D+  + ++L+ +Y++CG    AY  F++I  K  V WNS++ GF Q+
Sbjct: 559 RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQS 618

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G   EA+N+F QM    LE++  TF +A+ A +NI  +  GK +H  +   G   +  + 
Sbjct: 619 GYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVS 678

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL  +YAKCG +               +SW++MI  Y  HG   +A  LF+ M    + 
Sbjct: 679 NALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVL 725

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PN VTF+ +L ACSH G V+EG  YF +M     + P  +HYAC+VDLL RSG +  A +
Sbjct: 726 PNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKR 785

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
            +  MP   +  +W  LL+ C +HK ID+ +     L      D+  Y L+SN+YA  G 
Sbjct: 786 FVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGK 845

Query: 717 WDEFGKVRSIMEVTGLKKVPGYS 739
           WD   + R +M+  G+KK PG S
Sbjct: 846 WDCRDRTRQMMKDRGVKKEPGRS 868



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 169/621 (27%), Positives = 307/621 (49%), Gaps = 32/621 (5%)

Query: 34  RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           +LI+ Y   G L  +  VFD         W  +   ++          L+ +M+ +    
Sbjct: 102 KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161

Query: 94  SNFIYPSVLRACSSLG-DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
              I+  VLR CS         E++H + I  GF+    I   ++  Y + G L  A+KV
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F+ + +RD VSW ++I+    N    E + +F  +V                AC ++   
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSACTKVEFF 267

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
              + +HG VL++    +  + N+ + +YS+ G+L SAE+ F  + +R   S+ ++IS  
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            + G+  +AL  F KM    ++P+ +T+ ++L +CA +G L  GK  H   I+ GM  + 
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
              G +L++ Y +C  +    +     G+ + L+               ++ ++  QMQ 
Sbjct: 388 VVEG-SLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFTQMQI 431

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL 451
            G++P+ F+  S L  C  +G+  LG QIH  V+K   + + +V S LIDMY+K G  + 
Sbjct: 432 EGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDH 491

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F R+++  VV W +MI G+ Q+    EA+NLF +M    ++ D + F +AI AC+ 
Sbjct: 492 ALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAG 551

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           I  L++G+ +H +    G   D+ I  AL  +YA+CG ++ A   FD +  ++ VSW+++
Sbjct: 552 IQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSL 611

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           +  +   G   +A ++F QM  +G++ N  TF + + A ++  +V  GK     +R  G 
Sbjct: 612 VSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGY 671

Query: 632 EPDLQHYACMVDLLSRSGDIE 652
           + + +    ++ L ++ G I+
Sbjct: 672 DSETEVSNALITLYAKCGTID 692



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/603 (27%), Positives = 291/603 (48%), Gaps = 38/603 (6%)

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           Y  FG L+ A  VFD+M  R +  W+ I  ++     +     +F  M+ + VE D    
Sbjct: 107 YLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIF 166

Query: 200 LSLAEAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
             +   C G   S R    IH   +    +    + N  I +Y K G L SA++ F  ++
Sbjct: 167 AVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLK 226

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
            R + SW AMIS  +++G+ ++A+  F ++              VL +C  + +   GK 
Sbjct: 227 ARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQ 272

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +H  ++++G   E  Y+  AL+  Y+  G +S  E++ H + +R+ +S+N LIS  A++G
Sbjct: 273 LHGLVLKQGFSSE-TYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQG 331

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQS 437
               AL L  +M      PD  +VAS LSAC +VG+L  G Q H + IK     D  V+ 
Sbjct: 332 YINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEG 391

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SL+D+Y KC     A+  F              +C + Q  N  ++  +F QM +  +  
Sbjct: 392 SLLDLYVKCSDIKTAHEFF--------------LC-YGQLDNLNKSFQIFTQMQIEGIVP 436

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           ++ T+ + ++ C+ +G  + G+ +H +++  G + ++Y+ + L DMYAK G L  A ++F
Sbjct: 437 NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIF 496

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             + E +VVSW+AMI  Y  H +  +A +LFK+M D GIK + + F + + AC+   +++
Sbjct: 497 RRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALD 556

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           +G+       + G   DL     +V L +R G +  A+     +    N S W +L++G 
Sbjct: 557 QGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLVSGF 615

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
                 +    I  +++  G   N  +T  S + A          VR   ++ G+ +  G
Sbjct: 616 AQSGYFEEALNIFAQMNKAGLEINS-FTFGSAVSAAA----NIANVRIGKQIHGMIRKTG 670

Query: 738 YST 740
           Y +
Sbjct: 671 YDS 673



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 239/536 (44%), Gaps = 56/536 (10%)

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           + G+   H M + GV  +  T L L E C        +RS +              G   
Sbjct: 63  ASGIGYLHLMEQHGVRANSQTFLWLLEGC------LNSRSFYD-------------GLKL 103

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I  Y   GDL  A   F ++  R  + W  + + +       +    F +ML    E + 
Sbjct: 104 IDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDE 163

Query: 298 ITLITVLGSCAGLGW-LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
                VL  C+G     R  + +H + I  G         P LI+ Y + G +S  +KV 
Sbjct: 164 RIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNP-LIDLYFKNGFLSSAKKVF 222

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  R+ +SW  +IS  ++ G  +EA+ L  Q+               LSAC  V   +
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268

Query: 417 LGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G Q+HG V+K     E +V ++L+ +YS+ G  + A  +F  + Q+  V +NS+I G  
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           Q G    A+ LF +M L+C + D VT  + + AC+++G L  GK  H   I  G+  DI 
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           ++ +L D+Y KC D++TA   F                CYG    LN +  +F QM   G
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEG 433

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           I PN+ T+ +IL  C+  G+ + G+     +   G + ++   + ++D+ ++ G ++ A 
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493

Query: 656 KMIHSMPFPANGSI-WGALLNGCRIHKRIDVMKTIEKELSVTG-TNDN-GYYTLLS 708
           K+   +    N  + W A++ G   H +      + KE+   G  +DN G+ + +S
Sbjct: 494 KIFRRL--KENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAIS 547



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 213/469 (45%), Gaps = 48/469 (10%)

Query: 305 GSCAGLGWL--------REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           G+ +G+G+L        R        ++   +     Y G  LI+FY   G ++    V 
Sbjct: 61  GNASGIGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVF 120

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC-GNVGSL 415
             +  R++  WN + + +  + +      L  +M T  +  D    A  L  C GN  S 
Sbjct: 121 DEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSF 180

Query: 416 QLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           +   QIH   I    +   F+ + LID+Y K GF + A  +FE ++ +  V W +MI G 
Sbjct: 181 RFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGL 240

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            QNG   EA+ LF Q+ L+              AC+ +   E GK +H  ++  G   + 
Sbjct: 241 SQNGYEEEAMLLFCQIVLS--------------ACTKVEFFEFGKQLHGLVLKQGFSSET 286

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           Y+  AL  +Y++ G+L +A+++F  MS+R+ VS++++I      G +N A +LFK+M   
Sbjct: 287 YVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLD 346

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
             KP+ VT  ++L AC+  G++  GK + +     G+  D+     ++DL  +  DI+ A
Sbjct: 347 CQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTA 406

Query: 655 ----------------FKMIHSMPFPA---NGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
                           F++   M       N   + ++L  C      D+ + I  ++  
Sbjct: 407 HEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLK 466

Query: 696 TGTNDNGYY-TLLSNIYAEEGNWDEFGKV-RSIME---VTGLKKVPGYS 739
           TG   N Y  ++L ++YA+ G  D   K+ R + E   V+    + GY+
Sbjct: 467 TGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYT 515



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 28/204 (13%)

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +GN+   I   H M  + +  +  TFL  ++ C N                    +  Y 
Sbjct: 60  DGNA-SGIGYLHLMEQHGVRANSQTFLWLLEGCLN-------------------SRSFYD 99

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              L D Y   GDL  A  VFD M  R++  W+ + + +     +     LF++ML   +
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFY--FNAMRIF-GVEPDLQHYACMVDLLSRSGDIEG 653
           + +E  F  +L  C  SG+    +F    +A  I  G E        ++DL  ++G +  
Sbjct: 160 EFDERIFAVVLRGC--SGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217

Query: 654 AFKMIHSMPFPANGSI-WGALLNG 676
           A K+  ++   A  S+ W A+++G
Sbjct: 218 AKKVFENL--KARDSVSWVAMISG 239


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/712 (32%), Positives = 379/712 (53%), Gaps = 24/712 (3%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLG 109
           +FD+   P + +W  +I  ++ NN   +++L Y +M         ++ + S L+AC+   
Sbjct: 59  LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG-------------EFGCLDDARKVFDKM 156
            L  G+ +H  +++  F    ++  S+L  Y              +F   D  R+VFD M
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R+VV+W+++I+ Y     + E  KMF +M+R G+ P  V+ +++  A   +     A 
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNAN 238

Query: 217 SIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            ++G V++       D  + +S I MY++ G +  A   F    +R T  W  MI  Y +
Sbjct: 239 VLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQ 298

Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +    +A++ FV+++E ++   + +T ++ L + + L WL  G+ +H  I++     +  
Sbjct: 299 NNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVV 358

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            L  A+I  Y+ CG +    KV   + ER++++WN ++S + + G+  E L L+  MQ  
Sbjct: 359 ILN-AIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQ 417

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
           G M DS ++ + LS   N+ S ++G Q H ++I+   + E + S LIDMY+K G    A 
Sbjct: 418 GFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTAQ 477

Query: 454 LLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
            LFE+     +    WN+MI G+ QNG S E   +F +M    +  + VT  + + AC+ 
Sbjct: 478 QLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNP 537

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G +  GK +H   I   + +++++ TAL DMY+K G +  A+ VF    E+N V+++ M
Sbjct: 538 MGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTM 597

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
           I  YG HG    A SLF  ML SGIKP+ VTF+ IL ACS++G V+EG   F +M R + 
Sbjct: 598 ISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYK 657

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRIDVMKTI 689
           ++P  +HY C+ D+L R G +  A++ +  +    N   IWG+LL  CRIH   ++ K +
Sbjct: 658 IQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVV 717

Query: 690 EKEL--SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +L     G++  GY+ LLSNIYA EGNWD   +VR  M   GL K  G S
Sbjct: 718 ANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCS 769



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 172/354 (48%), Gaps = 13/354 (3%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHA++L +           +I  Y+  GS+ +S  VF    E D   W  ++  ++ N 
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E ++L   M ++   + +    ++L   S+L     G++ H  +I+ G   +  + +
Sbjct: 403 LDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDS 461

Query: 135 SILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            ++  Y + G +  A+++F+K +   RD  +W+++IA Y  N    EG  +F  M+ + V
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+ VT+ S+  AC  + ++   + IHG  +R  +  +  +G + + MYSK G +  AE 
Sbjct: 522 RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAEN 581

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F +  ++ + ++T MIS Y + G  ++AL  F  ML    +P+ +T + +L +C+  G 
Sbjct: 582 VFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGL 641

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPA-----LIEFYAECGKMSECEKVIHAIGE 361
           + EG  +      + M  EY     A     + +     G++ E  + +  +GE
Sbjct: 642 VDEGLRIF-----QSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGE 690


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/661 (32%), Positives = 360/661 (54%), Gaps = 6/661 (0%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           Y  M +    +  + +PS+ +AC++L     G  +H  ++  G   D  I +S++  Y +
Sbjct: 37  YISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAK 96

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FGC+   RKVFD M  R+VV W++II SY    D+     MF  M   G++P  VT+LSL
Sbjct: 97  FGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSL 156

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
                 +  L     +H  ++    + D  L NS + MY KCG +  A R F  I  R  
Sbjct: 157 LPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDI 213

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW +++S Y++ G  ++ L+    M     +P+  T  + L + A  G LR GK VH  
Sbjct: 214 VSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGL 273

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +++ G+  +  ++  AL+  Y  C  +    KV  +  E++++ W  +IS   +   + +
Sbjct: 274 MLKDGLNID-QHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADK 332

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
           AL +  QM    + P + ++AS L+AC  +G   +G  IHG+V++     D   Q+SL+ 
Sbjct: 333 ALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVT 392

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY+KC     +  +F ++ +K +V WN+++ G  +NG   + I  F++M  + L  D +T
Sbjct: 393 MYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSIT 452

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             + +QAC + G L +GKW+H+ ++   +   I  +TAL DMY KCG+L+ AQ+ FD M 
Sbjct: 453 VTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCML 512

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           +R++V+WS +I  YG +G+   A   + + L +G++PN V F+++L ACSH G + +G  
Sbjct: 513 QRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLS 572

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            + +M + F + P+L+H AC+VDLLSR+G ++ A+     M    +  + G LL+ CR++
Sbjct: 573 IYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVN 632

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
            R+++ K I +++      D G +  L+N YA    WD   K  + M   GLKK PG+S+
Sbjct: 633 GRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSS 692

Query: 741 I 741
           I
Sbjct: 693 I 693



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 187/680 (27%), Positives = 332/680 (48%), Gaps = 54/680 (7%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LF++CTNL   +    LH  ++V GL +D    + LI  YA+ G +   R VFDT  + +
Sbjct: 55  LFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRN 114

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y      + +  ++ +M RE       +  ++L     +  L     +H 
Sbjct: 115 VVPWTTIIGSYSREGDIDIAFSMFKQM-RESGIQPTSV--TLLSLLPGISKLPLLLCLHC 171

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            II  GF+ D  +  S++  YG+ G + DAR++F+ +  RD+VSW+S++++Y       E
Sbjct: 172 LIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEE 231

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++  +M  E ++PD  T  S   A      LR  + +HG +L+  + ID  + ++ +V
Sbjct: 232 ILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVV 291

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y +C  L  A + F    ++    WTAMIS   ++    KAL  F +M+E   +P+  T
Sbjct: 292 LYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTAT 351

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L + L +CA LG    G S+H  ++R+G+  +      +L+  YA+C K+ +   + + +
Sbjct: 352 LASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQN-SLVTMYAKCNKLQQSCSIFNKM 410

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++++SWN +++ +A+ G   + +    +M+   L PDS +V S L ACG+ G+L  G 
Sbjct: 411 VEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGK 470

Query: 420 QIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            IH  V++   I C     +++L+DMY KCG    A   F+ + Q+ +V W+++I G+  
Sbjct: 471 WIHNFVLRSSLIPCI--MTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGF 528

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG    A+  + +     +E + V F++ + ACS+ G + KG  ++  +      KD   
Sbjct: 529 NGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMT-----KDF-- 581

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                             R+  ++  R  V     +D     G++++A S +K M     
Sbjct: 582 ------------------RMSPNLEHRACV-----VDLLSRAGKVDEAYSFYKMMFK--- 615

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP----DLQHYACMVDLLSRSGDIE 652
           +P+ V    +L AC  +G VE GK    A  +F ++P    +    A     +SR   +E
Sbjct: 616 EPSIVVLGMLLDACRVNGRVELGKVI--ARDMFELKPVDPGNFVQLANSYASMSRWDGVE 673

Query: 653 GAFKMIHSM---PFPANGSI 669
            A+  + S+    +P   SI
Sbjct: 674 KAWTQMRSLGLKKYPGWSSI 693



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 280/540 (51%), Gaps = 6/540 (1%)

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           S++S+++         + L+ + SM +   + D  T  SL +AC  L       S+H  V
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 223 LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
           +   +  D  +G+S I  Y+K G +    + F  + KR    WT +I  Y+R G    A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
             F +M E   +P  +TL+++L    G+  L     +HC II  G   +   L  +++  
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLL---PGISKLPLLLCLHCLIILHGFESDLA-LSNSMVNM 191

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           Y +CG++++  ++  +IG R+I+SWN L+S Y++ G ++E L+LL  M+   + PD  + 
Sbjct: 192 YGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
            S+LSA    G L+LG  +HG ++K     D+ V+S+L+ +Y +C   + AY +F+   +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K VVMW +MI G  QN  + +A+ +F+QM  + ++    T  + + AC+ +G  + G  +
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  ++  G+  DI    +L  MYAKC  LQ +  +F+ M E+++VSW+A++  +  +G L
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACM 641
           +     F +M  S ++P+ +T  ++L AC  +G++ +GK+  N +    + P +     +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           VD+  + G++E A K    M    +   W  L+ G   + + ++      E   TG   N
Sbjct: 492 VDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPN 550



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           L+ E I       +NS++      G   + +  +  M     ++D  TF +  +AC+N+ 
Sbjct: 4   LIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLN 63

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
               G  +H  ++  G+  D YI ++L   YAK G +   ++VFD+M +RNVV W+ +I 
Sbjct: 64  LFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIG 123

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y   G ++ A S+FKQM +SGI+P  VT +++L   S    +         + + G E 
Sbjct: 124 SYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGIS---KLPLLLCLHCLIILHGFES 180

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           DL     MV++  + G I  A ++  S+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFESI 208


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/715 (31%), Positives = 388/715 (54%), Gaps = 27/715 (3%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           S +L +   + G  R++ L+F+                +  N+  +E++ L+  + R  +
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFE----------------FSRNDQNKEALNLFLGLRRSGS 88

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
                    VL+ C  L D   G++VH + IKCGF +D  + TS++  Y +   ++D  +
Sbjct: 89  PTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGER 148

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VFD+M  ++VVSW+S++A Y  N    + LK+F  M  EG++P+  T  ++        +
Sbjct: 149 VFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGA 208

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           +     +H  V++  +     +GNS + MYSK   +  A+  F  +E R   SW +MI+ 
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG 268

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           +  +G   +A E F +M     +       TV+  CA +  +   K +HCQ+I+ G   +
Sbjct: 269 FVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNG--SD 326

Query: 332 YDY-LGPALIEFYAECGKMSECEKVIHAI-GERNILSWNMLISEYARKGMSKEALELLVQ 389
           +D  +  AL+  Y++C ++ +  K+   + G +N++SW  +IS Y + G +  A+ L  Q
Sbjct: 327 FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQ 386

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGF 448
           M+  G+ P+ F+ ++ L+A   V   Q    IH  V+K + ++   V ++L D YSK G 
Sbjct: 387 MRREGVRPNHFTYSTILTANAAVSPSQ----IHALVVKTNYENSPSVGTALSDSYSKIGD 442

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            N A  +FE I +K +V W++M+ G+ Q G+   A+ +F Q+    +E +E TF + + A
Sbjct: 443 ANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNA 502

Query: 509 CSN-IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           C+     +E+GK  H   I  G    + + +AL  MYAK G++++A  VF    +R++VS
Sbjct: 503 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 562

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W++MI  Y  HG    +  +F++M    ++ + +TF+ ++ AC+H+G V EG+ YF+ M 
Sbjct: 563 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMV 622

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           + + + P ++HY+CMVDL SR+G +E A  +I+ MPFPA  +IW  LL  CR+H  + + 
Sbjct: 623 KDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLG 682

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +   ++L      D+  Y LLSNIYA  GNW E  KVR +M++  +KK  GYS I
Sbjct: 683 ELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 737



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 279/550 (50%), Gaps = 9/550 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   +  G   D    T L++ Y +  S+     VFD  +  +   W  L+  Y  N 
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E+++ L+ +M  E    + F + +VL   ++ G +  G +VH  +IK G D    +  
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y +   + DA+ VFD M +R+ VSW+S+IA +  N    E  ++F+ M  EGV+ 
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
                 ++ + C  +  +  A+ +H  V++     D  +  + +V YSKC ++  A + F
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352

Query: 255 VKIEK-RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
             +   +   SWTA+IS Y ++G   +A+  F +M      PN  T  T+L + A +   
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVS-- 410

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
                +H  +++         +G AL + Y++ G  +E  K+   I E++I++W+ ++S 
Sbjct: 411 --PSQIHALVVKTNY-ENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSG 467

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCKD 432
           YA+ G  + A+++ +Q+   G+ P+ F+ +S L+AC     S++ G Q H   IK    +
Sbjct: 468 YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 527

Query: 433 EF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
              V S+L+ MY+K G    A  +F+R   + +V WNSMI G+ Q+G   +++ +F +M 
Sbjct: 528 ALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMR 587

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDL 550
              LE+D +TF+  I AC++ G + +G+     ++  Y +   +   + + D+Y++ G L
Sbjct: 588 SKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGML 647

Query: 551 QTAQRVFDSM 560
           + A  + + M
Sbjct: 648 EKAMDLINKM 657



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 242/471 (51%), Gaps = 14/471 (2%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           + K  ++H  ++ +GL         ++  Y++   +  ++ VFD+ +  ++  W  +I  
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG 268

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           ++ N    E+  L+++M  E   ++  I+ +V++ C+++ ++   +++H ++IK G D D
Sbjct: 269 FVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFD 328

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             I+T+++  Y +   +DDA K+F  M   ++VVSW++II+ Y  N      + +F  M 
Sbjct: 329 LNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMR 388

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           REGV P+  T  ++  A     ++ P++ IH  V++   +    +G +    YSK GD  
Sbjct: 389 REGVRPNHFTYSTILTANA---AVSPSQ-IHALVVKTNYENSPSVGTALSDSYSKIGDAN 444

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A + F  I+++   +W+AM+S Y + G  + A++ F+++ +   EPN  T  +VL +CA
Sbjct: 445 EAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACA 504

Query: 309 G-LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
                + +GK  H   I+ G       +  AL+  YA+ G +    +V     +R+++SW
Sbjct: 505 APTASVEQGKQFHSCSIKSGFSNAL-CVSSALVTMYAKRGNIESANEVFKRQVDRDLVSW 563

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +IS YA+ G  K++L++  +M++  L  D  +    +SAC + G +  G +    ++K
Sbjct: 564 NSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK 623

Query: 428 ----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
               +   + +  S ++D+YS+ G    A  L  ++       +W +++  
Sbjct: 624 DYHIVPTMEHY--SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 672


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/735 (29%), Positives = 375/735 (51%), Gaps = 4/735 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
            LR+   LHA LL + LH D      L+  Y + G L  +R VFD     D   W  +I 
Sbjct: 65  TLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMIS 124

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +      ++++ ++ +M +E    + F   SVL+ACS         +VHG+++K     
Sbjct: 125 AHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD 184

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  + +S++  Y   G LD A  V   +  R  VSW++++  Y  + D    + +   +V
Sbjct: 185 DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLV 244

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G E    T+ ++ + C EL   +  +S+H  V++R ++ D  L +  + MYS+C    
Sbjct: 245 ASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAE 304

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F++I++      +AMISC++R     +AL+ FVKM  +  +PN    + + G  +
Sbjct: 305 EAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVAS 364

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
             G     +SVH  I++ G       +G A++  Y + G + +       I E +  SWN
Sbjct: 365 RTGDANLCRSVHAYIVKSGFA-MLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWN 423

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            ++S +      ++ L +  QM   G   + ++  S L  C ++ +L+ G Q+H  ++K 
Sbjct: 424 TILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKS 483

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
             + D  V   L+DMY++ G    A L+FE+++++    W  ++ G+ +   + + +  F
Sbjct: 484 GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYF 543

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M    +   + T   ++  CS++  L  G  +H   I  G    + +  AL DMY KC
Sbjct: 544 RSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKC 602

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G++  A+ +F     R+ V+W+ +I  Y  HG    A   FKQM+D G +P+ +TF+ +L
Sbjct: 603 GNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVL 662

Query: 608 WACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
            ACSH+G + EG+ YF ++  I+G+ P ++HYACMVD+LS++G +  A  +I+ MP   +
Sbjct: 663 SACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPD 722

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
            SIW  +L  CRIH+ I++ +   + L     +D     LLSNIYA+ G W +  +VR+I
Sbjct: 723 SSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNI 782

Query: 727 MEVTGLKKVPGYSTI 741
           +   G+KK PG S I
Sbjct: 783 LLDHGVKKEPGCSWI 797



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 298/609 (48%), Gaps = 24/609 (3%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           ++ + L+ C+    L  G+++H R+++     D  +  S+L  Y + G L DAR+VFD M
Sbjct: 52  LHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGM 111

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             RD+V+W+++I+++    D  + L MF  M +EG+ P+  T+ S+ +AC      +   
Sbjct: 112 PHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTH 171

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            +HG V++     D  +G+S +  Y+ CG+L +AE   + + +R   SW A+++ Y R G
Sbjct: 172 QVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            +++ +    K++   +E +  TL TVL  C  LG  + G+SVH  +I++G+  + + L 
Sbjct: 232 DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETD-NVLN 290

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
             L+E Y+ C    E  +V   I E +++  + +IS + R  M+ EAL+L V+M   G+ 
Sbjct: 291 SCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVK 350

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           P+ +            G   L   +H +++K      + V  ++++MY K G    A + 
Sbjct: 351 PNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVT 410

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ I +     WN+++  FY   N  + + +F QM       ++ T+++ ++ C+++  L
Sbjct: 411 FDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNL 470

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             G  VH  ++  G++ D  +   L DMYA+ G   +A  VF+ + ER+  SW+ ++  Y
Sbjct: 471 RFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGY 530

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG--------KFYFNAMR 627
               +       F+ ML   I+P++ T    L  CS   S+  G        K  +N+  
Sbjct: 531 AKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV 590

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRI 683
           + G          +VD+  + G+I  A  + H      +   W  ++ G   H    K +
Sbjct: 591 VSGA---------LVDMYVKCGNIADAEMLFHESE-TRDQVAWNTIICGYSQHGHGYKAL 640

Query: 684 DVMKTIEKE 692
           D  K +  E
Sbjct: 641 DAFKQMVDE 649



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 4/219 (1%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + R CT   NLR  T++HA +L +GL  D   S  L++ YA+ G   S+ LVF+  KE
Sbjct: 458 VSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D+F W V++  Y      E+ +  +  M+RE    S+      L  CS +  LGSG ++
Sbjct: 518 RDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL 577

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   IK G++   V+  +++  Y + G + DA  +F +  +RD V+W++II  Y  +   
Sbjct: 578 HSWAIKSGWNS-SVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHG 636

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
            + L  F  MV EG  PD +T + +  AC     L   R
Sbjct: 637 YKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGR 675


>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
          Length = 805

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 236/748 (31%), Positives = 393/748 (52%), Gaps = 13/748 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF++CT++R L +LHA +L  GL  D    + ++  YA +G L  +RL F  F   D   
Sbjct: 52  LFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQGFLNNDLAE 111

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++       + EE+ILLY  +   Q  +        L++C  L +L  G+ +H   +
Sbjct: 112 WNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIELRNLLLGKGMHADSV 171

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS--EG 180
           K G  +D  + +S++  Y +   +DD++K F+++  +D+VS++S+I  Y +N D +    
Sbjct: 172 KLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYSENMDSTSWNA 231

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIV 239
            K+   M    +E + VT++SL +  G L ++R  +S+H + +RR I I D  L  S + 
Sbjct: 232 FKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDEVLETSLVH 291

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
           MY +CG    A    +K   +   SW AM++   R+G    A+     ML E K  P+ +
Sbjct: 292 MYMQCGACQLAS-AVLKNSAQSVASWNAMLAGLVRTGQSGNAIHYLYIMLYEHKVVPDSV 350

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T   V+ +CA L       SVH  IIR+ + P    L  ALI+ Y +C +++  +++ + 
Sbjct: 351 TYANVISACAELCNSGYAASVHAYIIRRSI-PLDVVLATALIKVYLKCTRITISKRLFNQ 409

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++ +S+N +I  Y + GM  EA+ LL +M T  + P+  ++ S L+A  +      G
Sbjct: 410 LVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAAIADHKDFARG 469

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY-- 475
             IHG  I+   C +  + + +I MYS CG    A ++F   + K+++ W +M+ G    
Sbjct: 470 RWIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFC 529

Query: 476 -QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
              G ++E   L  Q + N  + D +  +TAIQA S  G L+  K VH  +    + KD 
Sbjct: 530 GHGGQTVELFQLLMQQHDN--KPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDT 587

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
               +L   YAKCG L  +  +F S+  R++ SW++MI  YGMHG       +FK M + 
Sbjct: 588 KTMNSLITAYAKCGRLDLSVSLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEG 647

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
            I P+ +TF ++L ACSH+G ++EG   F +M  ++ V P  +HY C VDL+SR+G +E 
Sbjct: 648 NINPDGLTFSSVLSACSHAGLIKEGLHIFQSMTSMYSVRPQEEHYGCFVDLMSRAGHLEE 707

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
            +K I         S+  ALL+ CR +    + + I  EL   G  + G Y L+S ++A+
Sbjct: 708 GYKFIKLSTLNDKSSVLCALLSACRTYGNTMLGQVISNELLEVGQQNPGTYALISEVFAQ 767

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +G W++   +R+  +  GL+K+PG S I
Sbjct: 768 KGQWNKSASIRNRAKENGLRKLPGSSLI 795


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/767 (30%), Positives = 407/767 (53%), Gaps = 37/767 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL +S ++L     LH H      +   P     +    + G L  +R +FD    P +
Sbjct: 8   LPLSQSPSHLP----LHTH----STNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPST 59

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVH 118
            +W  +I   + NNF +E++L Y  M     Q    ++ Y SVL+AC+   +L  G+ VH
Sbjct: 60  VLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVH 119

Query: 119 GRIIKCGFDKDDVIQTSILCTYGE-------------FGCLDDARKVFDKMTSRDVVSWS 165
              ++C  +   ++  S+L  Y               +   D  RKVFD M  R VV+W+
Sbjct: 120 AHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWN 179

Query: 166 SIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR- 224
           ++IA Y      +E +K F  M++ G++P  V+ +++  A   L   + A  +HG +++ 
Sbjct: 180 TLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKL 239

Query: 225 -RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
             +   D  + +S I MY++ G L  A++ F    +R T  W  MIS + ++ +  + ++
Sbjct: 240 GSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQ 299

Query: 284 SFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
            F + +E ++   + +TL++ + + + L      + +H  +I+     +   +  ALI  
Sbjct: 300 LFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMN-ALIAM 358

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           Y+ C  +    K+   + E++++SWN +IS + + G++ EAL L  +M+   LM DS +V
Sbjct: 359 YSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTV 418

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI--Q 460
            + LSA  ++ +  +G Q HG++++   + E + S LIDMY+K G    A  +FE+    
Sbjct: 419 TALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSH 478

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           ++    WNSM+ G+ QNG   +A  +  QM    +  + VT  + + AC+  G ++ GK 
Sbjct: 479 ERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQ 538

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H   I   + +++++ TAL DMY+K G +  A+ VF   +E+++V++S MI  YG HG 
Sbjct: 539 LHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGM 598

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYA 639
              A  +F +M  SGI+P+ VT + +L ACS++G V+EG   F +MR ++ ++P  +H+ 
Sbjct: 599 GESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFC 658

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIHKRIDVMKTIEKEL----S 694
           C+ D+L R+G ++ A++ +  +    N   IWG+LL  CRIHK+ ++ K + K+L     
Sbjct: 659 CVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEK 718

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + G    GY+ LLSNIYAEE NW+    VR  M   GLKK  G S I
Sbjct: 719 ING--KTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWI 763


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/647 (33%), Positives = 350/647 (54%), Gaps = 4/647 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L AC     L   +K+H   +K   + D  +   +   Y     +  AR++FD++ 
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +  V+ W+ II +Y  N      + ++HSM+  GV P+  T   + +AC  L ++     
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH H     ++ D  +  + +  Y+KCG L+ A+R F  +  R   +W AMI+  +  G 
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
              A++  ++M E    PN  T++ VL +      L  GK++H   +R+        +G 
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV-VVGT 249

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM- 396
            L++ YA+C  +    K+   +G RN +SW+ +I  Y      KEALEL  QM     M 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           P   ++ S L AC  +  L  G ++H ++IK+    D  + ++L+ MY+KCG  + A   
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ +  K  V +++++ G  QNGN+  A+++F  M L+ ++ D  T L  + ACS++  L
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + G   H  LI  G   D  I  AL DMY+KCG +  A+ VF+ M   ++VSW+AMI  Y
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
           G+HG   +A  LF  +L  G+KP+++TF+ +L +CSHSG V EG+ +F+AM R F + P 
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           ++H  CMVD+L R+G I+ A   I +MPF  +  IW ALL+ CRIHK I++ + + K++ 
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G    G + LLSNIY+  G WD+   +R   +  GLKK+PG S I
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWI 656



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 173/603 (28%), Positives = 309/603 (51%), Gaps = 10/603 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +C   + LT   ++H H L    + D     +L   Y     +  +R +FD    
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           P   +W  +I+ Y WN  F+ +I LYH M+      + + YP VL+ACS L  +  G ++
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H      G + D  + T+++  Y + G L +A+++F  M+ RDVV+W+++IA        
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + +++   M  EG+ P+  T++ +    GE  +L   +++HG+ +RR       +G   
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPN 296
           + MY+KC  LL A + F  +  R   SW+AMI  Y  S   ++ALE F +M L+   +P 
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPT 311

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKV 355
            +TL +VL +CA L  L  G+ +HC II+  +G   D  LG  L+  YA+CG + +  + 
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIK--LGSVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  ++ +S++ ++S   + G +  AL +   MQ  G+ PD  ++   L AC ++ +L
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 416 QLGLQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           Q G   HG+ +++    D  + ++LIDMYSKCG  + A  +F R+ +  +V WN+MI G+
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKD 533
             +G  +EA+ LFH +    L+ D++TF+  + +CS+ G + +G+ W       + +   
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +     + D+  + G +  A     +M  E +V  WSA++    +H  +     + K++ 
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609

Query: 593 DSG 595
             G
Sbjct: 610 SLG 612


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/712 (30%), Positives = 380/712 (53%), Gaps = 6/712 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I + A MG L  +R +    + P +  W  +I  Y  +    E   LY  M R+    +
Sbjct: 267 IISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPT 326

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              + S+L A +S+     G+++H   +K G D +  + +S++  Y + GC+ DA+KVFD
Sbjct: 327 RSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD 386

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
             T +++V W++++  +  N    E ++MF  M R  +E D  T +S+  AC  L SL  
Sbjct: 387 FSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDI 446

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R +H   ++  +  D  + N+ + MYSK G +  A+  F  I  + + SW A+I     
Sbjct: 447 GRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAH 506

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +   ++A+    +M      P+ ++  T + +C+ +     GK +HC  I+  +   +  
Sbjct: 507 NEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNH-A 565

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G +LI+ Y++ G +    KV+  +   +++  N LI+   +     EA+EL  Q+   G
Sbjct: 566 VGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDG 625

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCG-FKNL 451
             P +F+ AS LS C    S  +G Q+H + +K  +  +D  +  SL+ +Y KC   ++ 
Sbjct: 626 FKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDA 685

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             LL E    K++V W + I G+ QNG S +++ +F +M  + +  DE TF + ++ACS 
Sbjct: 686 NKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSE 745

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSA 570
           I  L  GK +H  +I  G        +AL DMY+KCGD+ ++  +F  + +++N++ W++
Sbjct: 746 IAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNS 805

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI  +  +G  N+A  LF++M +S +KP+EVT + +L ACSH+G + EG+  F++M +++
Sbjct: 806 MIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVY 865

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
           G+ P + HYAC++DLL R G ++ A ++I  +PF A+G IW   L  C++HK  +  K  
Sbjct: 866 GIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVA 925

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            K+L       +  Y  LS+++A  GNW E    R  M   G+ K PG S I
Sbjct: 926 AKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWI 977



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 180/634 (28%), Positives = 318/634 (50%), Gaps = 12/634 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S T   +  ++HA  +  GL  +    + LI  Y + G +  ++ VFD   E +  MW  
Sbjct: 339 SMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 398

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  ++ N+  EE+I ++  M R      +F + SVL AC +L  L  G +VH   IK  
Sbjct: 399 MLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNS 458

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D D  +  ++L  Y + G +D A+ +F  +  +D VSW+++I     N +  E + M  
Sbjct: 459 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLK 518

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G+ PD V+  +   AC  + +    + IH   ++  +  +  +G+S I +YSK G
Sbjct: 519 RMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFG 578

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           D+ S+ +    ++        A+I+   ++    +A+E F ++L+   +P+  T  ++L 
Sbjct: 579 DVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILS 638

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNI 364
            C G      GK VH   ++  +  +   LG +L+  Y +C  + +  K++  + + +N+
Sbjct: 639 GCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNL 698

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           + W   IS YA+ G S ++L +  +M++  +  D  + AS L AC  + +L  G +IHG 
Sbjct: 699 VEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGL 758

Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM-WNSMICGFYQNGNSLE 482
           +IK      E   S+L+DMYSKCG    ++ +F+ ++ K  +M WNSMI GF +NG + E
Sbjct: 759 IIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANE 818

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALT 541
           A+ LF +M  + L+ DEVT L  + ACS+ G + +G+ +   +   YG+   +     L 
Sbjct: 819 ALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLI 878

Query: 542 DMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
           D+  + G LQ AQ V D +  R + V W+  +    MH          K++++  ++P  
Sbjct: 879 DLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVE--MEPQR 936

Query: 601 VT---FMNILWACSHSGSVEEGKFYFNAMRIFGV 631
            +   F++ L A   +G+  E K    AMR  GV
Sbjct: 937 SSTYVFLSSLHAA--AGNWVEAKVAREAMREKGV 968



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/680 (25%), Positives = 322/680 (47%), Gaps = 42/680 (6%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C+ L  L +   +H  +L +G          L++ YA+   ++ +R VFD    PD
Sbjct: 166 VLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPD 225

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  WA +I  Y             H++ R Q  ++ F                       
Sbjct: 226 TICWASMIAGY-------------HRVGRYQQALALF----------------------S 250

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+ K G   D V   +I+ T    G L DAR +  ++     V+W+++I+SY  +   SE
Sbjct: 251 RMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESE 310

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              ++  M R+G+ P   T  S+  A   + +    + IH   ++  +  +  +G+S I 
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y K G +  A++ F    ++    W AM+  + ++   ++ ++ F  M     E +  T
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFT 430

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++VLG+C  L  L  G+ VHC  I+  M  +  ++  A+++ Y++ G +   + +   I
Sbjct: 431 FVSVLGACINLDSLDIGRQVHCITIKNSMDADL-FVANAMLDMYSKLGAIDVAKALFSLI 489

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             ++ +SWN LI   A     +EA+ +L +M+ +G+ PD  S A++++AC N+ + + G 
Sbjct: 490 PGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH   IK + C +  V SSLID+YSK G    +  +   +   S+V  N++I G  QN 
Sbjct: 550 QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNN 609

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLISYGVRKDIYID 537
              EAI LF Q+  +  +    TF + +  C+       GK VH + L S  + +D  + 
Sbjct: 610 REDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLG 669

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +L  +Y KC  L+ A ++   + + +N+V W+A I  Y  +G  + +  +F +M    +
Sbjct: 670 ISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDV 729

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           + +E TF ++L ACS   ++ +GK     +   G        + ++D+ S+ GD+  +F+
Sbjct: 730 RSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFE 789

Query: 657 MIHSMPFPANGSIWGALLNG 676
           +   +    N   W +++ G
Sbjct: 790 IFKELKNKQNIMPWNSMIVG 809



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 250/508 (49%), Gaps = 44/508 (8%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G  PD   +  +  AC  L +L   R +H  VL+             + MY+KC ++  A
Sbjct: 155 GGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDA 214

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
            R F  I    T  W +MI+ Y+R G +Q+AL  F +M ++   P+ +T +T++ + A +
Sbjct: 215 RRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASM 274

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
                                               G++S+   ++  I   + ++WN +
Sbjct: 275 ------------------------------------GRLSDARTLLKRIQMPSTVAWNAV 298

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--I 428
           IS Y++ G+  E   L   M+  GLMP   + AS LSA  ++ +   G QIH   +K  +
Sbjct: 299 ISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGL 358

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           D  + FV SSLI++Y K G  + A  +F+   +K++VMWN+M+ GF QN    E I +F 
Sbjct: 359 DA-NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQ 417

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            M    LE D+ TF++ + AC N+  L+ G+ VH   I   +  D+++  A+ DMY+K G
Sbjct: 418 YMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLG 477

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  A+ +F  +  ++ VSW+A+I     + +  +A  + K+M   GI P+EV+F   + 
Sbjct: 478 AIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAIN 537

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI----HSMPFP 664
           ACS+  + E GK    A   + V  +    + ++DL S+ GD+E + K++     S   P
Sbjct: 538 ACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVP 597

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKE 692
            N  I G + N  R  + I++ + + K+
Sbjct: 598 INALITGLVQNN-REDEAIELFQQVLKD 624



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 229/478 (47%), Gaps = 50/478 (10%)

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKR 260
           A ACG L         H  VLR  + + G LG++ + +Y + G +  A R          
Sbjct: 72  ARACGVL---------HARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPA 122

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
              + ++++SC+ RSG  +  L++F ++   +   P+   L  VL +C+ LG L +G+ V
Sbjct: 123 SGAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQV 182

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
           HC +++ G      +    L++ YA+C ++ +  +V   I   + + W  +I+ Y R G 
Sbjct: 183 HCDVLKSGFCSSA-FCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGR 241

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSL 439
            ++AL L  +M+  G  PD  +  + +S   ++G L                        
Sbjct: 242 YQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRL------------------------ 277

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
                     + A  L +RIQ  S V WN++I  + Q+G   E   L+  M    L    
Sbjct: 278 ----------SDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTR 327

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            TF + + A +++   ++G+ +H   + +G+  ++++ ++L ++Y K G +  A++VFD 
Sbjct: 328 STFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 387

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
            +E+N+V W+AM+  +  +    +   +F+ M  + ++ ++ TF+++L AC +  S++ G
Sbjct: 388 STEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIG 447

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI-WGALLNG 676
           +          ++ DL     M+D+ S+ G I+ A K + S+  P   S+ W AL+ G
Sbjct: 448 RQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVA-KALFSL-IPGKDSVSWNALIVG 503



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 147/327 (44%), Gaps = 27/327 (8%)

Query: 408 ACGNVGS--LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE--RIQQKS 463
           ACG + +  L+LGL + G +            +L+D+Y + G    A+           S
Sbjct: 74  ACGVLHARVLRLGLPLRGRL----------GDALVDLYGRSGRVGYAWRALGCCTGAPAS 123

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCL---EMDEVTFLTAIQACSNIGQLEKGKW 520
               +S++    ++G+  + ++ F +  L C      D+      + ACS +G LE+G+ 
Sbjct: 124 GAAASSVLSCHARSGSPRDVLDAFQR--LRCSIGGTPDQFGLAVVLSACSRLGALEQGRQ 181

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           VH  ++  G     +    L DMYAKC +++ A+RVFD ++  + + W++MI  Y   G+
Sbjct: 182 VHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGR 241

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
              A +LF +M   G  P++VT++ I+   +  G + + +     +++    P    +  
Sbjct: 242 YQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQM----PSTVAWNA 297

Query: 641 MVDLLSRSG---DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           ++   S+SG   ++ G +K +         S + ++L+        D  + I       G
Sbjct: 298 VISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHG 357

Query: 698 TNDNGYY-TLLSNIYAEEGNWDEFGKV 723
            + N +  + L N+Y + G   +  KV
Sbjct: 358 LDANVFVGSSLINLYVKHGCISDAKKV 384


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/680 (35%), Positives = 377/680 (55%), Gaps = 19/680 (2%)

Query: 72  WNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
           W+++  E+   YH+M +  A +++  +  S+L+ACSSL  +  G+ +H  ++K GFD   
Sbjct: 28  WDSW--EACSRYHQMKKAGAQLTDPTLVHSILKACSSL-PVRHGKSIHASLLKQGFDSLT 84

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
               S+L  Y + G LD A  VFD M SRD VSW+ +I  +       +GL  F      
Sbjct: 85  STGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVI 144

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
             EP+  T++    AC  L ++     +HG+++R        + NS + MY+   D+  A
Sbjct: 145 AFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERA 203

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAG 309
           E  F ++ +R   SW+ MI  Y ++G  + AL+ F++M      E + IT+++VL +CA 
Sbjct: 204 EELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACAN 263

Query: 310 LGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            G +  G+SVH  +I +G+  +YD ++G ++I+ Y++C       K  + +  RN +SWN
Sbjct: 264 TGDISMGRSVHGVVICRGL--DYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWN 321

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIK 427
            +IS   R     EAL L   M   G   D  ++ + L +C   V   Q    IH  VI+
Sbjct: 322 SIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF-IHSIVIR 380

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
              + +EFV +SLID YSKC    LA+ LF+R++ K  V W++MI GF   G   EAI L
Sbjct: 381 WGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIAL 440

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F +M     + + VT L+ ++A S    L++ KW H   I  G+  ++ + TA+ DMYAK
Sbjct: 441 FQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAK 500

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG++  +++ FD + E+N+VSW AMI   GM+G   DA +L  +M   G+KPN VT +++
Sbjct: 501 CGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSV 560

Query: 607 LWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP--F 663
           L ACSH G VEEG  F+ N ++  GVEP L+HY+CMVD+LSR+G +  A  +I  MP   
Sbjct: 561 LSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERM 620

Query: 664 PANGSIWGALLNGCRI--HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
                +WGALL+ CR   + R+       + L +   +  GY+ L S++YA  G W +  
Sbjct: 621 RDGAGLWGALLSACRSSGNSRLGAGAAF-RVLELEPQSSAGYF-LASSMYAASGLWADAA 678

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           ++R +++  G++ V GYS +
Sbjct: 679 RMRWLVKARGVRVVAGYSLV 698



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 170/589 (28%), Positives = 300/589 (50%), Gaps = 18/589 (3%)

Query: 3   LFRSCTNL--RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + ++C++L  R    +HA LL  G          +++ Y + G+L S+  VFD+ +  DS
Sbjct: 56  ILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDS 115

Query: 61  FMWAVLIKCYMWNNFFEESILLYH--KMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
             W ++I  ++     ++ +  +   ++I  +  +S  +    + AC SLG +  G K+H
Sbjct: 116 VSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVL--AIHACRSLGAMEEGLKMH 173

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G II+ GF     +Q S+L  Y +   ++ A ++FD+M  RDV+SWS +I  Y    +  
Sbjct: 174 GYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAK 232

Query: 179 EGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
             L++F  M     +E D +TM+S+ +AC     +   RS+HG V+ R +  D  +GNS 
Sbjct: 233 MALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSI 292

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKC D  SA + F ++  R T SW ++IS   R+    +AL  F  M +     + 
Sbjct: 293 IDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADE 352

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL+ +L SC       + K +H  +IR G     +++  +LI+ Y++C  +    K+  
Sbjct: 353 VTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELN-EFVINSLIDAYSKCDLIELAWKLFD 411

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  ++ +SW+ +I+ +   G   EA+ L  +M      P+  ++ S L A      L+ 
Sbjct: 412 RLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKR 471

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
               HG  I+     E  V ++++DMY+KCG   L+   F++I +K++V W +MI     
Sbjct: 472 SKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGM 531

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIY 535
           NG + +A+ L  +M L+ L+ + VT L+ + ACS+ G +E+G  +  + +  +GV   + 
Sbjct: 532 NGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLE 591

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
             + + DM ++ G L +A  + + M ER       M D  G+ G L  A
Sbjct: 592 HYSCMVDMLSRAGKLNSAMNLIEKMPER-------MRDGAGLWGALLSA 633



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 201/422 (47%), Gaps = 15/422 (3%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C N   ++    +H  ++  GL YD      +I+ Y++     S+   F+    
Sbjct: 255 VSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPC 314

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            ++  W  +I   +      E++ L++ M +           ++L++C    D    + +
Sbjct: 315 RNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFI 374

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  +I+ G++ ++ +  S++  Y +   ++ A K+FD++ ++D VSWS++IA +      
Sbjct: 375 HSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKP 434

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E + +F  M +   +P+ VT+LSL EA      L+ ++  HG  +RR +  +  +G + 
Sbjct: 435 DEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAI 494

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY+KCG++  + + F +I ++   SW AMI+    +G  + AL    +M     +PN+
Sbjct: 495 LDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNV 554

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +T ++VL +C+  G + EG S    +++  G+ P  ++    +++  +  GK++    +I
Sbjct: 555 VTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYS-CMVDMLSRAGKLNSAMNLI 613

Query: 357 HAIGER---NILSWNMLISEYARKGMSK-------EALELLVQMQTWGLMPDSFSVASSL 406
             + ER       W  L+S     G S+         LEL  Q      +  S   AS L
Sbjct: 614 EKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGL 673

Query: 407 SA 408
            A
Sbjct: 674 WA 675


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/733 (30%), Positives = 384/733 (52%), Gaps = 9/733 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           + H   +  GL YD    T  +  YA  G + +++ +F+   + +   W  L+  Y  N 
Sbjct: 80  QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNG 139

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E I  Y +M  E    +      V+ +C  L D+  G ++ G  +K G +       
Sbjct: 140 SKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAAN 199

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  +G  G +++A  +F++M  RD +SW+SII++   N    E  + FH M     E 
Sbjct: 200 SLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEI 259

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           ++ T+  L   CG +  L+  + +HG  ++  ++ +  L N+ + +YS  G    AE  F
Sbjct: 260 NYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIF 319

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R   SW +M++CY + G    AL+ F +ML +K+E N +T  + L +C    +  
Sbjct: 320 RRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFT 379

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  ++  G+  E   +G  LI FY +C KM+E +KV   + + + ++WN LI  +
Sbjct: 380 NGKILHGFVVVLGLQDEL-IIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGF 438

Query: 375 ARKGMSKEAL---ELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHGHVIKIDC 430
           A      EA+   +L+ +  T G+  D  ++ + L +C     L + G+ IH H +    
Sbjct: 439 ANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGF 496

Query: 431 K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D+ VQSSLI MY+KCG  + +  +F+++  K+  +WN++I    + G   EA+ L  +
Sbjct: 497 DLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVR 556

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    +E D+  F TA+   +++  LE+G+ +H   I  G   D +I  A  DMY KCG+
Sbjct: 557 MRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGE 616

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A R+    ++R+ +SW+ +I     HGQ + A   F  ML  G+KPN V+F+ +L A
Sbjct: 617 LDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSA 676

Query: 610 CSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSH G V+EG  Y+ +M  ++G++P ++H  CM+DLL RSG +  A   I  MP P N  
Sbjct: 677 CSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDL 736

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           +W +LL  CRI++ +D+ +   K L     +D+  Y L SN++A  G W++   VR  M 
Sbjct: 737 VWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMG 796

Query: 729 VTGLKKVPGYSTI 741
              ++K P +S +
Sbjct: 797 AHKIQKKPAHSWV 809



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 176/669 (26%), Positives = 320/669 (47%), Gaps = 10/669 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y++ G +  ++LVFD   E +   W  ++  Y+    + E++L +  +       S F+ 
Sbjct: 2   YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61

Query: 99  PSVLRACSSLGDLGS-GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
            S++ AC+    +   G + HG  IKCG   D  + TS +  Y  +G + +A+K+F++M 
Sbjct: 62  ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+VVSW+S++ SY DN    E +  +  M  EG+  +   +  +  +CG L  +     
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           + GH L+  ++      NS I M+  CGD+  A   F ++ +R T SW ++IS   ++  
Sbjct: 182 LLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTL 241

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +++   F  M  V EE N  TL  +L  C  + +L+ GK VH   ++ G+      L  
Sbjct: 242 HEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI-CLCN 300

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L+  Y++ G+  + E +   + ER+++SWN +++ Y + G    AL++  +M       
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
           +  +  S+L+AC +      G  +HG V+ +  +DE  + ++LI  Y KC     A  +F
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVF 420

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE-MDEVTFLTAIQACSNIGQL 515
           +R+ +   V WN++I GF  N    EA+  F  M       +D +T +  + +C     L
Sbjct: 421 QRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDL 480

Query: 516 EK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
            K G  +H   +  G   D ++ ++L  MYAKCGDL ++  +FD +  +    W+A+I  
Sbjct: 481 IKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAA 540

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
              +G   +A  L  +M  +GI+ ++  F   L   +    +EEG+    +    G E D
Sbjct: 541 NARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELD 600

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS--IWGALLNGCRIHKRIDVMKTIEKE 692
                  +D+  + G+++ A ++   +P P + S   W  L++    H +    K    +
Sbjct: 601 HFIINAAMDMYGKCGELDDALRI---LPQPTDRSRLSWNTLISISARHGQFHKAKETFHD 657

Query: 693 LSVTGTNDN 701
           +   G   N
Sbjct: 658 MLKLGVKPN 666



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 6/440 (1%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSK G +  A+  F ++ +R   SW  M+S Y R G + +A+  F  +  +  +P+   
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 300 LITVLGSCAGLGWL-REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           + +++ +C     + +EG   H   I+ G+   YD ++G + + FYA  G +S  +K+ +
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGL--IYDVFVGTSFVHFYASYGIVSNAQKMFN 118

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +RN++SW  L+  Y+  G  KE +    +M+  G+  +  ++A  +S+CG +  + L
Sbjct: 119 EMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIIL 178

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+ GH +K   + +    +SLI M+  CG  N A  +F  + ++  + WNS+I    Q
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           N    E+   FH M L   E++  T    +  C ++  L+ GK VH   + YG+  +I +
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              L  +Y+  G  + A+ +F  M ER+++SW++M+ CY   G+   A  +F +ML    
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           + N VTF + L AC        GK     + + G++ +L     ++    +   +  A K
Sbjct: 359 EINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKK 418

Query: 657 MIHSMPFPANGSIWGALLNG 676
           +   MP   +   W AL+ G
Sbjct: 419 VFQRMP-KLDKVTWNALIGG 437


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/657 (33%), Positives = 347/657 (52%), Gaps = 7/657 (1%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M  E    + F  P VL+    + D   G +VH   +  GF  D  +  +++  YG FG 
Sbjct: 1   MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 146 LDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
           +DDAR+VFD+  S R+ VSW+ ++++Y  N    + +++F  MV  G++P       +  
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
           AC    ++   R +H  V+R   + D    N+ + MY K G +  A   F K+      S
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W A+IS    +G   +A+E  ++M      PN+  L ++L +CAG G    G+ +H  +I
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
           +     + DY+G  L++ YA+   + +  KV   +  R+++ WN LIS  +  G   EA 
Sbjct: 238 KANADSD-DYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 296

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMY 443
            +   ++  GL  +  ++A+ L +  ++ +     Q+H    KI    D  V + LID Y
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 356

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
            KC   + A  +FE      ++   SMI    Q  +   AI LF +M    LE D     
Sbjct: 357 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 416

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           + + AC+++   E+GK VH  LI      D +   AL   YAKCG ++ A+  F S+ ER
Sbjct: 417 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 476

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
            VVSWSAMI     HG    A  LF +M+D GI PN +T  ++L AC+H+G V+E K YF
Sbjct: 477 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 536

Query: 624 NAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           N+M+ +FG++   +HY+CM+DLL R+G ++ A ++++SMPF AN S+WGALL   R+HK 
Sbjct: 537 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKD 596

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            ++ K   ++L +     +G + LL+N YA  G W+E  KVR +M+ + +KK P  S
Sbjct: 597 PELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 653



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 286/584 (48%), Gaps = 8/584 (1%)

Query: 1   MPLFRSCTNLRKL-TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKEP 58
           +P+   C    +L  ++HA  + TG   D   +  L+  Y   G +  +R VFD    E 
Sbjct: 13  LPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSER 72

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           ++  W  L+  Y+ N+   ++I ++ +M+      + F +  V+ AC+   ++ +G +VH
Sbjct: 73  NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 132

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +++ G++KD     +++  Y + G +D A  +F+KM   DVVSW+++I+    N    
Sbjct: 133 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 192

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             +++   M   G+ P+   + S+ +AC    +    R IHG +++     D  +G   +
Sbjct: 193 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 252

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K   L  A + F  +  R    W A+IS  +  G   +A   F  + +     N  
Sbjct: 253 DMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT 312

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           TL  VL S A L      + VH   + + +G  +D ++   LI+ Y +C  +S+  +V  
Sbjct: 313 TLAAVLKSTASLEAASATRQVHA--LAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 370

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                +I++   +I+  ++    + A++L ++M   GL PD F ++S L+AC ++ + + 
Sbjct: 371 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 430

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+H H+IK     D F  ++L+  Y+KCG    A L F  + ++ VV W++MI G  Q
Sbjct: 431 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 490

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIY 535
           +G+   A+ LF +M    +  + +T  + + AC++ G +++ K   + +   +G+ +   
Sbjct: 491 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 550

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             + + D+  + G L  A  + +SM  + N   W A++    +H
Sbjct: 551 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 594


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/614 (34%), Positives = 342/614 (55%), Gaps = 55/614 (8%)

Query: 181 LKMFHSMVREGVEPDF--VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           L+    ++ +  +PD    T  S+ + C +L S++  R IH  +    +++DG LG+  +
Sbjct: 84  LRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143

Query: 239 VMYSKCGDLLSAERTFVKIEK--------------------------------------- 259
            MY  CGDL    R F K+                                         
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203

Query: 260 ----------RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
                     R   SW +MIS Y  +G  +K L+ F +ML +    +L T+++V+  C+ 
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
            G L  G+++H   I+   G E   L   L++ Y++ G ++   +V   +GER+++SW  
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELT-LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTS 322

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I+ YAR+G+S  ++ L  +M+  G+ PD F++ + L AC   G L+ G  +H ++ +  
Sbjct: 323 MIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENK 382

Query: 430 CK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            + D FV ++L+DMY+KCG    A+ +F  +Q K +V WN+MI G+ +N    EA+NLF 
Sbjct: 383 MQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFV 442

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M  N  + + +T    + AC+++  LE+G+ +H  ++  G   D ++  AL DMY KCG
Sbjct: 443 EMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCG 501

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  A+ +FD + E+++VSW+ MI  YGMHG  ++A + F +M +SGI+P+EV+F++IL+
Sbjct: 502 ALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILY 561

Query: 609 ACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSHSG ++EG  +FN MR    +EP  +HYAC+VDLL+R+G++  A+K I  MP   + 
Sbjct: 562 ACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDA 621

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           +IWGALL GCRI+  + + + + + +      + GYY LL+NIYAE   W+E  K+R  +
Sbjct: 622 TIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERI 681

Query: 728 EVTGLKKVPGYSTI 741
              GL+K PG S I
Sbjct: 682 GRRGLRKNPGCSWI 695



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 160/532 (30%), Positives = 266/532 (50%), Gaps = 64/532 (12%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y SVL+ C+ L  +  G ++H  I     + D V+ + ++  Y   G L + R++FDK+ 
Sbjct: 104 YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVA 163

Query: 158 S-------------------------------------------------RDVVSWSSII 168
           +                                                 RDV+SW+S+I
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMI 223

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
           + Y  N    +GL +F  M+  G+  D  TM+S+   C     L   R++HG+ ++    
Sbjct: 224 SGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFG 283

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            +  L N  + MYSK G+L SA + F  + +R   SWT+MI+ Y R G    ++  F +M
Sbjct: 284 KELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 343

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
            +    P++ T+ T+L +CA  G L  GK VH  I    M  +  ++  AL++ YA+CG 
Sbjct: 344 EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDL-FVSNALMDMYAKCGS 402

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           M +   V   +  ++I+SWN +I  Y++  +  EAL L V+MQ +   P+S ++A  L A
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPA 461

Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C ++ +L+ G +IHGH+++     D  V ++L+DMY KCG   LA LLF+ I +K +V W
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 521

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
             MI G+  +G   EAI  F++M  + +E DEV+F++ + ACS+ G L++G W    ++ 
Sbjct: 522 TVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG-WGFFNMM- 579

Query: 528 YGVRKDIYID------TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
              R +  I+        + D+ A+ G+L  A +    M  E +   W A++
Sbjct: 580 ---RNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 226/448 (50%), Gaps = 9/448 (2%)

Query: 32  STRLIESYAEMGSLR--SSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE 89
           S  L +   E+G  R  S+R +FD   + D   W  +I  Y+ N   E+ + L+ +M+  
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
                     SV+  CS+ G L  G  +HG  IK  F K+  +   +L  Y + G L+ A
Sbjct: 246 GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSA 305

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
            +VF+ M  R VVSW+S+IA Y         +++FH M +EG+ PD  T+ ++  AC   
Sbjct: 306 IQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACT 365

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
             L   + +H ++   K++ D  + N+ + MY+KCG +  A   F +++ +   SW  MI
Sbjct: 366 GLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMI 425

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
             Y+++    +AL  FV+M +   +PN IT+  +L +CA L  L  G+ +H  I+R G  
Sbjct: 426 GGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFS 484

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  ++  AL++ Y +CG +     +   I E++++SW ++I+ Y   G   EA+    +
Sbjct: 485 LDR-HVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNE 543

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKC 446
           M+  G+ PD  S  S L AC + G L  G     +  +   I+ K E   + ++D+ ++ 
Sbjct: 544 MRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHY-ACIVDLLARA 602

Query: 447 GFKNLAYLLFERIQ-QKSVVMWNSMICG 473
           G  + AY   + +  +    +W +++CG
Sbjct: 603 GNLSKAYKFIKMMPIEPDATIWGALLCG 630



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 181/359 (50%), Gaps = 6/359 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH + +      +   +  L++ Y++ G+L S+  VF+T  E     W  +I  Y     
Sbjct: 273 LHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGL 332

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            + S+ L+H+M +E  +   F   ++L AC+  G L +G+ VH  I +     D  +  +
Sbjct: 333 SDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNA 392

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G + DA  VF +M  +D+VSW+++I  Y  N+  +E L +F  M +   +P+
Sbjct: 393 LMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPN 451

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +TM  +  AC  L +L   + IHGH+LR    +D  + N+ + MY KCG L  A   F 
Sbjct: 452 SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD 511

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I ++   SWT MI+ Y   G+  +A+ +F +M     EP+ ++ I++L +C+  G L E
Sbjct: 512 MIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 571

Query: 316 GKSVHCQIIRKG--MGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLI 371
           G      ++R    + P+ ++    +++  A  G +S+  K I  +  E +   W  L+
Sbjct: 572 GWGFF-NMMRNNCCIEPKSEHYA-CIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 56/272 (20%)

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           ++Y  C     + L  E I  K +  +N  IC F + GN   A+ L +Q     LE+   
Sbjct: 46  NLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR-- 102

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL---------- 550
           T+ + +Q C+++  ++ G+ +H  + S  V  D  + + L  MY  CGDL          
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 551 ---------------------------------------QTAQRVFDSMSERNVVSWSAM 571
                                                  ++A+++FD + +R+V+SW++M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRI-F 629
           I  Y  +G       LF+QML  GI  +  T ++++  CS++G +  G+  +  A++  F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           G E  L +  C++D+ S+SG++  A ++  +M
Sbjct: 283 GKELTLNN--CLLDMYSKSGNLNSAIQVFETM 312



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C +L  L R   +H H+L  G   D   +  L++ Y + G+L  +RL+FD   E D
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
              W V+I  Y  + +  E+I  +++M           + S+L ACS  G L  G
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/725 (31%), Positives = 392/725 (54%), Gaps = 29/725 (4%)

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPS 100
           G L  +R +FD    P + +W  +I   + NNF +E++L Y  M     Q    ++ Y S
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE-------------FGCLD 147
           VL+AC+   +L  G+ VH   ++C  +   ++  S+L  Y               +   D
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
             RKVFD M  R VV+W+++IA Y      +E +K F  M++ G++P  V+ +++  A  
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197

Query: 208 ELCSLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
            L   + A  +HG +++   +   D  + +S I MY++ G L  A++ F    +R T  W
Sbjct: 198 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQII 324
             MIS + ++ +  + ++ F + +E ++   + +TL++ + + + L      + +H  +I
Sbjct: 258 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 317

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
           +     +   +  ALI  Y+ C  +    K+   + E++++SWN +IS + + G++ EAL
Sbjct: 318 KNVAVTQVCVMN-ALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 376

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYS 444
            L  +M+   LM DS +V + LSA  ++ +  +G Q HG++++   + E + S LIDMY+
Sbjct: 377 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYA 436

Query: 445 KCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           K G    A  +FE+    ++    WNSM+ G+ QNG   +A  +  QM    +  + VT 
Sbjct: 437 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 496

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            + + AC+  G ++ GK +H   I   + +++++ TAL DMY+K G +  A+ VF   +E
Sbjct: 497 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANE 556

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           +++V++S MI  YG HG    A  +F +M  SGI+P+ VT + +L ACS++G V+EG   
Sbjct: 557 KSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 616

Query: 623 FNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIH 680
           F +MR ++ ++P  +H+ C+ D+L R+G ++ A++ +  +    N   IWG+LL  CRIH
Sbjct: 617 FESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIH 676

Query: 681 KRIDVMKTIEKEL----SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           K+ ++ K + K+L     + G    GY+ LLSNIYAEE NW+    VR  M   GLKK  
Sbjct: 677 KQFELGKLVAKKLLEMEKING--KTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKET 734

Query: 737 GYSTI 741
           G S I
Sbjct: 735 GSSWI 739



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/544 (29%), Positives = 279/544 (51%), Gaps = 33/544 (6%)

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG--VEP 194
           LC   + G L  AR++FD +     V W++II     N    E L  + +M      V+ 
Sbjct: 11  LCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKC 70

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC------GDLL 248
           D  T  S+ +AC +  +L   +++H H LR  +     + NS + MYS C      G ++
Sbjct: 71  DSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMV 130

Query: 249 SA-------ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           S         + F  + KR   +W  +I+ Y R+  + +A++ F  M+++  +P+ ++ +
Sbjct: 131 SGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFV 190

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHA 358
            V  + + LG  +    VH  +++  +G EY    Y+  + I  YAE G +   +KV   
Sbjct: 191 NVFPAFSSLGDFKNANVVHGMLVK--LGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN 248

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQ-MQTWGLMPDSFSVASSLSACGNVGSLQL 417
             ERN   WN +IS + +   S E ++L  Q +++     D  ++ S++SA  ++   +L
Sbjct: 249 CLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFEL 308

Query: 418 GLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
             Q+H  VIK +      V ++LI MYS+C   + ++ +F+ + +K VV WN+MI  F Q
Sbjct: 309 AEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQ 368

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG + EA+ LF++M    L +D VT    + A S++   + GK  H  L+  G++ +  +
Sbjct: 369 NGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GM 427

Query: 537 DTALTDMYAKCGDLQTAQRVFDS--MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           D+ L DMYAK G ++ AQ VF+     ER+  +W++M+  Y  +G ++ A  + +QMLD 
Sbjct: 428 DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQ 487

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH----YACMVDLLSRSGD 650
            + PN VT  +IL AC+ SG ++ GK     +  F +  DL         ++D+ S+SG 
Sbjct: 488 KVMPNVVTLASILPACNPSGYIDWGK----QLHGFSIRNDLDQNVFVATALIDMYSKSGS 543

Query: 651 IEGA 654
           I  A
Sbjct: 544 IAHA 547



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 242/482 (50%), Gaps = 13/482 (2%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           P F S  + +    +H  L+  G  Y  D    +  I  YAE+G L  ++ VFD   E +
Sbjct: 194 PAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 253

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + +W  +I  ++ NNF  E I L+ + +  E A I      S + A S L      E++H
Sbjct: 254 TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLH 313

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +IK        +  +++  Y     +D + K+FD M  +DVVSW+++I+++  N    
Sbjct: 314 AFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLND 373

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L +F+ M ++ +  D VT+ +L  A  +L +    +  HG++LR  I+ +G + +  I
Sbjct: 374 EALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLI 432

Query: 239 VMYSKCGDLLSAERTFVK--IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            MY+K G + +A+  F K    +R   +W +M+S Y ++G   +A     +ML+ K  PN
Sbjct: 433 DMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPN 492

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           ++TL ++L +C   G++  GK +H   IR  +     ++  ALI+ Y++ G ++  E V 
Sbjct: 493 VVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNV-FVATALIDMYSKSGSIAHAENVF 551

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               E++I++++ +I  Y + GM + AL +  +MQ  G+ PD+ ++ + LSAC   G + 
Sbjct: 552 SKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVD 611

Query: 417 LGLQIHGH---VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM--WNSMI 471
            GLQI      V  I    E     + DM  + G  + AY     + +K  VM  W S++
Sbjct: 612 EGLQIFESMRTVYNIQPSTEHF-CCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLL 670

Query: 472 CG 473
             
Sbjct: 671 AA 672


>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
 gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
          Length = 883

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/726 (33%), Positives = 382/726 (52%), Gaps = 14/726 (1%)

Query: 6   SCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C++LR L    R+H  +            T L++ YA  G LR +R VFD  +  D   
Sbjct: 155 ACSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVIC 214

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I  Y       ++  L  +M       S+  +  +L ACSSL +   G+K+H R +
Sbjct: 215 WNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACSSLEE---GKKIHSRAL 271

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
             G     ++Q +++  YG+   LD AR+VF K+ + DVVSW+++I +Y  +    E L+
Sbjct: 272 ARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALE 331

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMY 241
           ++  M  EG+EPD VT  S+  AC     L   +++H  +L RK    DG L  + I MY
Sbjct: 332 LYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMY 391

Query: 242 SKCGDL-LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            KCG L LS+E      + +    W AMI+ Y + G+ + A++ +  M +   +P+  TL
Sbjct: 392 VKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTL 451

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            ++L +CA L  L +G+ VH +II      +   +  ALI  YA CG++ E + V   + 
Sbjct: 452 SSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMK 511

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R+++SW +LIS Y + G ++ AL L  +M   G+ P   ++ + ++AC  + SL  G+ 
Sbjct: 512 NRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEGIV 571

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ--QKSVVMWNSMICGFYQNG 478
           IH     +   D  VQ++LI MY++C   +LA  +F +++  + S   WN+M+  + Q G
Sbjct: 572 IHALTDSMFFTDTAVQAALISMYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLG 631

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              E I L+ +M    ++ +E TF  A+ ACS +G + +G  +H ++ S     D+ + T
Sbjct: 632 LPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAVREGYRIHEQVSSSRYSSDLSLKT 691

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  MYAKC  +  A  VF+ + + +VV+W+AMI  Y  +G    A  L+ +ML  G KP
Sbjct: 692 ALVHMYAKCNRVDAAFHVFEQL-QPDVVAWNAMIAAYAQNGYAWHALELYSKMLH-GYKP 749

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            E TF+ +  AC H+G V+E K+YF +M    + P   HY+C+V +LSR+G +E A  ++
Sbjct: 750 LEPTFLCVFLACGHAGLVDECKWYFQSMIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLL 809

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS--NIYAEEGN 716
           HSMPF      W +LL  CR H  +   +    E       D+  Y LLS  NI+A  G 
Sbjct: 810 HSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAPYVLLSNVNIFAASGC 869

Query: 717 WDEFGK 722
            D   K
Sbjct: 870 LDHLRK 875



 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 208/691 (30%), Positives = 341/691 (49%), Gaps = 24/691 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C N   L    R+HAH++ +GL  D      L++ Y + GS+  +  VF       
Sbjct: 51  LLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRS 110

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W  +I  +  N    ++I ++  M        +    SVL ACSSL DL  G ++HG
Sbjct: 111 LFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHG 170

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI    F    V++T ++  Y   G L +AR+VFD++ ++DV+ W+S+IA+Y      ++
Sbjct: 171 RISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQ 230

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             ++   M   GV+    T   +  AC    SL   + IH   L R +     + N+ I 
Sbjct: 231 ARQLCEEMEGFGVKASDTTFAGILGACS---SLEEGKKIHSRALARGLSSSIIVQNALIS 287

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KC +L +A R F K+      SWTA+I  Y + G  ++ALE + +M     EP+ +T
Sbjct: 288 MYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVT 347

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +C+    L  G+++H +++ +  G     L  ALI  Y +CG++    ++  + 
Sbjct: 348 FTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSC 407

Query: 360 GE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
            + + ++ WN +I+ Y ++G S+ A++L   M+  GL PD  +++S LSAC  +  L+ G
Sbjct: 408 KDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKG 467

Query: 419 LQIHGHVIKI-DC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            Q+H  +I   DC ++  V ++LI MY+ CG    A  +F+R++ + VV W  +I  + Q
Sbjct: 468 EQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQ 527

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            G++  A+ L+ +M +  ++  EVT L  I ACS +  L +G  V H L       D  +
Sbjct: 528 GGDARRALRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEG-IVIHALTDSMFFTDTAV 586

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
             AL  MYA+C  L  A +VF  +   E +   W+AM+  Y   G   +   L+ +M  +
Sbjct: 587 QAALISMYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSST 646

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           GIK NE TF   L ACS  G+V EG      +       DL     +V + ++   ++ A
Sbjct: 647 GIKANEGTFAGALAACSMLGAVREGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVDAA 706

Query: 655 FKMIHSM------------PFPANGSIWGAL 673
           F +   +             +  NG  W AL
Sbjct: 707 FHVFEQLQPDVVAWNAMIAAYAQNGYAWHAL 737



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 183/584 (31%), Positives = 306/584 (52%), Gaps = 14/584 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L+ C +   L  G ++H  I+  G   D  +   +L  YG+ G +DDA +VF  + 
Sbjct: 48  YAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALP 107

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R + SW+ IIA++  N    + ++MF SM   G++PD  T+ S+  AC  L  L   R 
Sbjct: 108 RRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRR 167

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IHG +   + +    +    + MY++CG L  A   F +IE +    W +MI+ Y + G 
Sbjct: 168 IHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGH 227

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +A +   +M     + +  T   +LG+C+    L EGK +H + + +G+      +  
Sbjct: 228 SAQARQLCEEMEGFGVKASDTTFAGILGACSS---LEEGKKIHSRALARGLSSSI-IVQN 283

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           ALI  Y +C ++    +V   +   +++SW  LI  Y + G ++EALEL  QM+  G+ P
Sbjct: 284 ALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEP 343

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           D  +  S LSAC N   L+LG  +H  ++  K    D  + ++LI+MY KCG  +L+  +
Sbjct: 344 DKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEI 403

Query: 456 FERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           F+  +  K+VV+WN+MI  + Q G S  A++L+  M    L+ DE T  + + AC+ +  
Sbjct: 404 FQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKD 463

Query: 515 LEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
           LEKG+ VH ++I S    ++  +  AL  MYA CG+++ A+ VF  M  R+VVSW+ +I 
Sbjct: 464 LEKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILIS 523

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y   G    A  L+++ML  G++P EVT + ++ ACS   S+ EG    +A+       
Sbjct: 524 AYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEG-IVIHALTDSMFFT 582

Query: 634 DLQHYACMVDLLSRSGDIEGA---FKMIHSMPFPANGSIWGALL 674
           D    A ++ + +R   ++ A   F+ +  +   AN   W A+L
Sbjct: 583 DTAVQAALISMYARCRRLDLACQVFRQVRHLESSAN--CWNAML 624



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 229/429 (53%), Gaps = 13/429 (3%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T  +L + CG   +L   R IH H++   +  DG LG+  + MY KCG +  A + F  +
Sbjct: 47  TYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL 106

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +R   SW  +I+ + ++   +KA+E F  M     +P+  TL +VLG+C+ L  L EG+
Sbjct: 107 PRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGR 166

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H + I  G       +   L++ YA CG++ E  +V   I  ++++ WN +I+ YA+ 
Sbjct: 167 RIHGR-ISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQG 225

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQ 436
           G S +A +L  +M+ +G+     + A  L AC    SL+ G +IH   +         VQ
Sbjct: 226 GHSAQARQLCEEMEGFGVKASDTTFAGILGAC---SSLEEGKKIHSRALARGLSSSIIVQ 282

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           ++LI MY KC   + A  +F +++   VV W ++I  + Q+G + EA+ L+ QM    +E
Sbjct: 283 NALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGME 342

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID----TALTDMYAKCGDLQT 552
            D+VTF + + ACSN   LE G+ +H +L++   RKD + D     AL +MY KCG L  
Sbjct: 343 PDKVTFTSVLSACSNTNDLELGQALHARLLA---RKDGFSDGVLVAALINMYVKCGRLDL 399

Query: 553 AQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           +  +F S  + + VV W+AMI  Y   G    A  L+  M   G+ P+E T  +IL AC+
Sbjct: 400 SSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACA 459

Query: 612 HSGSVEEGK 620
               +E+G+
Sbjct: 460 ELKDLEKGE 468



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 9/295 (3%)

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           A+ L  CGN  +L  G +IH H++      D F+   L+ MY KCG  + A  +F  + +
Sbjct: 49  AALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPR 108

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           +S+  WN +I  F +N +  +AI +F  M    ++ D  T  + + ACS++  LE+G+ +
Sbjct: 109 RSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRI 168

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H ++ S   +  I ++T L  MYA+CG L+ A+ VFD +  ++V+ W++MI  Y   G  
Sbjct: 169 HGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHS 228

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACM 641
             A  L ++M   G+K ++ TF  IL ACS   S+EEGK   +     G+   +     +
Sbjct: 229 AQARQLCEEMEGFGVKASDTTFAGILGACS---SLEEGKKIHSRALARGLSSSIIVQNAL 285

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR----IDVMKTIEKE 692
           + +  +  +++ A + + S     +   W AL+     H R    +++ K +E E
Sbjct: 286 ISMYGKCNELDAA-RRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGE 339


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/647 (33%), Positives = 350/647 (54%), Gaps = 4/647 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L AC     L   +K+H   +K   + D  +   +   Y     +  AR++FD++ 
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +  V+ W+ II +Y  N      + ++HSM+  GV P+  T   + +AC  L ++     
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH H     ++ D  +  + +  Y+KCG L+ A+R F  +  R   +W AMI+  +  G 
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
              A++  ++M E    PN  T++ VL +      L  GK++H   +R+        +G 
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV-VVGT 249

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM- 396
            L++ YA+C  +    K+   +G RN +SW+ +I  Y      KEALEL  QM     M 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           P   ++ S L AC  +  L  G ++H ++IK+    D  + ++L+ MY+KCG  + A   
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ +  K  V +++++ G  QNGN+  A+++F  M L+ ++ D  T L  + ACS++  L
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + G   H  LI  G   D  I  AL DMY+KCG +  A+ VF+ M   ++VSW+AMI  Y
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
           G+HG   +A  LF  +L  G+KP+++TF+ +L +CSHSG V EG+ +F+AM R F + P 
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           ++H  CMVD+L R+G I+ A   I +MPF  +  IW ALL+ CRIHK I++ + + K++ 
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G    G + LLSNIY+  G WD+   +R   +  GLKK+PG S I
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWI 656



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 172/602 (28%), Positives = 308/602 (51%), Gaps = 8/602 (1%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +C   + LT   ++H H L    + D     +L   Y     +  +R +FD    
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           P   +W  +I+ Y WN  F+ +I LYH M+      + + YP VL+ACS L  +  G ++
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H      G + D  + T+++  Y + G L +A+++F  M+ RDVV+W+++IA        
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + +++   M  EG+ P+  T++ +    GE  +L   +++HG+ +RR       +G   
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPN 296
           + MY+KC  LL A + F  +  R   SW+AMI  Y  S   ++ALE F +M L+   +P 
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPT 311

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +TL +VL +CA L  L  G+ +HC II+ G   +   LG  L+  YA+CG + +  +  
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDI-LLGNTLLSMYAKCGVIDDAIRFF 370

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  ++ +S++ ++S   + G +  AL +   MQ  G+ PD  ++   L AC ++ +LQ
Sbjct: 371 DXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQ 430

Query: 417 LGLQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G   HG+ +++    D  + ++LIDMYSKCG  + A  +F R+ +  +V WN+MI G+ 
Sbjct: 431 HGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG 490

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDI 534
            +G  +EA+ LFH +    L+ D++TF+  + +CS+ G + +G+ W       + +   +
Sbjct: 491 IHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRM 550

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
                + D+  + G +  A     +M  E +V  WSA++    +H  +     + K++  
Sbjct: 551 EHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQS 610

Query: 594 SG 595
            G
Sbjct: 611 LG 612


>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
 gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 820

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/733 (31%), Positives = 396/733 (54%), Gaps = 25/733 (3%)

Query: 29  PPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR 88
           P   +RL     + G+ + +R +FD   +P + +W  +I  ++ NN   E++L Y +M +
Sbjct: 40  PSIRSRL-SKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM-K 97

Query: 89  EQATISN---FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           + A  +N   + Y S L+AC+   +L +G+ VH  +I+C  +   V+  S++  Y    C
Sbjct: 98  KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY--VSC 155

Query: 146 L--------DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
           L        D  RKVFD M  ++VV+W+++I+ Y      +E  + F  M+R  V+P  V
Sbjct: 156 LNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPV 215

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           + +++  A     S++ A   +G +L+   +   D  + +S I MY++ GD+ S+ R F 
Sbjct: 216 SFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD 275

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLR 314
              +R    W  MI  Y ++    +++E F++ +  KE   + +T +    + + L  + 
Sbjct: 276 SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVE 335

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+  H   + K        +  +L+  Y+ CG + +   V  ++ ER+++SWN +IS +
Sbjct: 336 LGRQFH-GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAF 394

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            + G+  E L L+ +MQ  G   D  +V + LSA  N+ + ++G Q H  +I+   + E 
Sbjct: 395 VQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG 454

Query: 435 VQSSLIDMYSKCGFKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           + S LIDMYSK G   ++  LFE     ++    WNSMI G+ QNG++ +   +F +M  
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +  + VT  + + ACS IG ++ GK +H   I   + +++++ +AL DMY+K G ++ 
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A+ +F    ERN V+++ MI  YG HG    A SLF  M +SGIKP+ +TF+ +L ACS+
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSY 634

Query: 613 SGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIW 670
           SG ++EG   F  MR ++ ++P  +HY C+ D+L R G +  A++ +  +    N   +W
Sbjct: 635 SGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694

Query: 671 GALLNGCRIHKRIDVMKTIEKELSV--TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           G+LL  C++H  +++ +T+ + L+    G N +GY  LLSN+YAEE  W    KVR  M 
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMR 754

Query: 729 VTGLKKVPGYSTI 741
             GLKK  G S I
Sbjct: 755 EKGLKKEVGRSGI 767


>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
 gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
          Length = 860

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/696 (31%), Positives = 367/696 (52%), Gaps = 21/696 (3%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y + GSL  +  VF   +  ++F W  +I  Y  N +   +I ++  M+ E     
Sbjct: 171 LVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEP 230

Query: 95  NFI-YPSVLRACSSLGDLGSGEKVHG---RIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
           + I Y  VL ACS+LGDL +G ++H    RI   G + DDV+Q  IL  +   G L   R
Sbjct: 231 DPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTR 290

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           ++FD+M  R VV+W+++IA+Y       E L+++H M    +EPD + + ++ +AC  L 
Sbjct: 291 EMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLK 347

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           +L   R++H  +  R  +    +    + MY KCGDL  A RTF   + R   SWT++I+
Sbjct: 348 NLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLIT 407

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y+   + ++ALE F  M     EPN IT  TV+ +C+ L  L  G+++H +++  G   
Sbjct: 408 AYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHIS 467

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           + +++G AL+  Y++ G++     V  +I  +   SW +++    + G S EALE+  ++
Sbjct: 468 D-EFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRI 526

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS-LIDMYSKCGFK 449
              G  P S   +++L +C  +  +     IHG +   D   + V S+ L+++Y+KCG  
Sbjct: 527 HLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGEL 586

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A L+F+++ +K+ V W +MI G+ QNG   EA+ L+  M +   + + + F+  I +C
Sbjct: 587 EKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDV---QPNFIAFVPVISSC 643

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +++G L +G+ VH +L   G++ +  I TAL +MYAKCG L  A+  FDS    +  +W+
Sbjct: 644 ADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWN 703

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI- 628
           +M   Y   G  +    L+++M   G++PN +T +++L ACSH G +EE +  F  M   
Sbjct: 704 SMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVAD 763

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH--------SMPFPANGSIWGALLNGCRIH 680
            G+ P  +HY+CM DLL RSG +E A K++             P   S W + L  C+ H
Sbjct: 764 HGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTH 823

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
                     ++L      D+  Y LLS  Y+ +  
Sbjct: 824 NDWGRAAGAAEKLYELDPEDSAPYVLLSQTYSPQAK 859



 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 201/720 (27%), Positives = 368/720 (51%), Gaps = 22/720 (3%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C  L+ + R   +H  +  +    D      L+  YA+ G L  SR +F+  +   
Sbjct: 36  VLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRT 95

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ ++FF+E++  + +M    A  S+  + SVL AC S  DL +G+ +H 
Sbjct: 96  VATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGKAIHR 152

Query: 120 RI--IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           +I         D+++Q S++  YG+ G L+DA +VF  +  ++  SW+++I +Y  N   
Sbjct: 153 QIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYE 212

Query: 178 SEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLR---RKIKIDGPL 233
              +++F  M+ EG VEPD +T   +  AC  L  L     IH  + R     ++ D  L
Sbjct: 213 RRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVL 272

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            +  + ++++CG L+     F ++  R   +WT MI+ YN+ G+  +ALE +  M     
Sbjct: 273 QDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DI 329

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           EP+ I L  VL +C+ L  L +G++VH +I  +   P    +   L++ Y +CG ++E  
Sbjct: 330 EPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSL-MVQTLLVDMYVKCGDLAEAR 388

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +       R+++SW  LI+ Y+ +   +EALE+   M+  G+ P+S +  + + AC  + 
Sbjct: 389 RTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLS 448

Query: 414 SLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           SL  G  +H  V+      DEFV ++L+ MYSK G  + A ++F+ I  K    W  M+ 
Sbjct: 449 SLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLV 508

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
              QNG+S EA+ ++ +++L         F  A+ +C+ +  + + + +H  + S     
Sbjct: 509 ALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYP 568

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+ +   L ++YAKCG+L+ A+ VFD M+E+N VSW+ MI  Y  +G+  +A  L+K M 
Sbjct: 569 DLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM- 627

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
              ++PN + F+ ++ +C+  G++ EG+     +   G++ +      +V++ ++ G + 
Sbjct: 628 --DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLG 685

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A +   S   P  G+ W ++            +  + +E+ + G   NG  TLLS + A
Sbjct: 686 LAREFFDSTYCPDAGA-WNSMATAYAQFGHGSQVLELYREMCLQGVQPNG-ITLLSVLVA 743



 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 182/617 (29%), Positives = 314/617 (50%), Gaps = 13/617 (2%)

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y    +  E++ LY +M       ++  +  VL AC+ L D+  G+KVH RI +  
Sbjct: 1   MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
              D V+Q ++L  Y + G L+++R++F+ M  R V +W+++I +Y  +    E L+ F 
Sbjct: 61  ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV--LRRKIKIDGPLGNSFIVMYSK 243
            M      P  +T  S+  AC     L   ++IH  +     +I+ D  L NS + MY K
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLIT 302
           CG L  AER F  I ++   SWTAMI+ Y ++G+ ++A+E F  M+ E + EP+ IT   
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237

Query: 303 VLGSCAGLGWLREGKSVHCQIIR-KGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIG 360
           VL +C+ LG L  G  +H  I R   +G EYD  L   ++  +A CG +    ++   + 
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R +++W  +I+ Y ++G S EALEL   M    + PD  ++++ L AC  + +L+ G  
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVLQACSRLKNLEQGRA 354

Query: 421 IHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H  +   D +    VQ+ L+DMY KCG    A   F+  + + V+ W S+I  +     
Sbjct: 355 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENF 414

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             EA+ +FH M L  +E + +TF T I ACS +  L  G+ +H ++++ G   D ++  A
Sbjct: 415 GREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA 474

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L  MY+K G +  A+ VFDS+  +   SW  M+     +G  ++A  ++ ++   G +P 
Sbjct: 475 LVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPG 534

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
              F   L +C+    V   +     ++     PDL     ++++ ++ G++E A +++ 
Sbjct: 535 SPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKA-RLVF 593

Query: 660 SMPFPANGSIWGALLNG 676
                 N   W  ++ G
Sbjct: 594 DQMTEKNEVSWTTMIGG 610



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 174/608 (28%), Positives = 299/608 (49%), Gaps = 24/608 (3%)

Query: 3   LFRSCTNLRKLT---RLHA--HLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           +  +C+ L  L    R+HA  H + T GL YD      ++  +A  GSL  +R +FD   
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
                 W  +I  Y    +  E++ LYH M  E   I+     +VL+ACS L +L  G  
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDIA---LSNVLQACSRLKNLEQGRA 354

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VH RI    F+   ++QT ++  Y + G L +AR+ FD   +RDV+SW+S+I +Y     
Sbjct: 355 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENF 414

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E L++FHSM  EGVEP+ +T  ++ +AC  L SL P R++H  V+      D  +GN+
Sbjct: 415 GREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA 474

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MYSK G +  A   F  I  +   SW  M+    ++G   +ALE + ++      P 
Sbjct: 475 LVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPG 534

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
                  L SC  L  +   +++H  I      P+   L   L+  YA+CG++ +   V 
Sbjct: 535 SPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDL-VLSNVLMNVYAKCGELEKARLVF 593

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             + E+N +SW  +I  YA+ G   EALEL   M    + P+  +    +S+C ++G+L 
Sbjct: 594 DQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVPVISSCADLGALV 650

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G ++H  +     + +E + ++L++MY+KCG   LA   F+         WNSM   + 
Sbjct: 651 EGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYA 710

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
           Q G+  + + L+ +M L  ++ + +T L+ + ACS++G LE+ +     +++ +G+    
Sbjct: 711 QFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTS 770

Query: 535 YIDTALTDMYAKCGDLQTAQRVF---------DSMSERNVVSWSAMIDCYGMHGQLNDAA 585
              + +TD+  + G L+ A++V          ++ S   V +W + +     H     AA
Sbjct: 771 EHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAA 830

Query: 586 SLFKQMLD 593
              +++ +
Sbjct: 831 GAAEKLYE 838


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/712 (31%), Positives = 378/712 (53%), Gaps = 24/712 (3%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLG 109
           +FD+   P + +W  +I  ++ NN   +++L Y +M         ++ + S L+AC+   
Sbjct: 59  LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG-------------EFGCLDDARKVFDKM 156
            L  G+ +H  +++  F    ++  S+L  Y              +F   D  R+VFD M
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R+VV+W+++I+ Y     + E  KMF +M+R G+ P  V+ +++  A   +     A 
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNAN 238

Query: 217 SIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            ++G V++       D  + +S I MY++ G +  A   F    +R T  W  MI  Y +
Sbjct: 239 VLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQ 298

Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +    +A++ FV+++E ++   + +T ++ L + + L WL  G+ +H  I++     +  
Sbjct: 299 NNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVV 358

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            L  A+I  Y+ CG +    KV   + ER++++WN ++S + + G+  E L L+ +MQ  
Sbjct: 359 ILN-AIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQ 417

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
           G M DS ++ + LS   N+ S ++G Q H ++I+   + E +   LIDMY+K G    A 
Sbjct: 418 GFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKSGLITTAQ 477

Query: 454 LLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
            LFE+     +    WN+MI G+ QNG S E   +F +M    +  + VT  + + AC+ 
Sbjct: 478 QLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNP 537

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G +  GK +H   I   + +++++ TAL DMY+K G +  A+ VF    E+N V+++ M
Sbjct: 538 MGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTM 597

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
           I  YG HG    A SLF  ML SGIKP+ VTF+ IL ACS++G V+EG   F +M R + 
Sbjct: 598 ILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYK 657

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRIDVMKTI 689
           ++P  +HY C+ D+L R G +  A++ +  +    N   IWG+LL  CRIH   ++ K +
Sbjct: 658 IQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVV 717

Query: 690 EKEL--SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +L     G+   GY+ LLSNIYA EGNWD   +VR  M   GL K  G S
Sbjct: 718 ANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCS 769



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 173/350 (49%), Gaps = 5/350 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHA++L +           +I  Y+  GS+ +S  VF    E D   W  ++  ++ N 
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E ++L  +M ++   + +    ++L   S+L     G++ H  +I+ G   +  +  
Sbjct: 403 LDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDG 461

Query: 135 SILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            ++  Y + G +  A+++F+K +   RD  +W+++IA Y  N    EG  +F  M+ + V
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+ VT+ S+  AC  + ++   + IHG  +R  +  +  +G + + MYSK G +  AE 
Sbjct: 522 RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAEN 581

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F +  ++ + ++T MI  Y + G  ++AL  F  ML    +P+ +T + +L +C+  G 
Sbjct: 582 VFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGL 641

Query: 313 LREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           + EG  +   + R+  + P  ++    + +     G++ E  + +  +GE
Sbjct: 642 VDEGLRIFQSMEREYKIQPSSEHYC-CVADMLGRVGRVXEAYEFVKGLGE 690


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/594 (35%), Positives = 345/594 (58%), Gaps = 15/594 (2%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSL--AEACGELC 210
           M  R+ VS+ ++I  Y  +  + E + +F  + REG E +   F T+L L  +  C EL 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAEL- 59

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
               A S+H  + +   + +  +G + I  Y+ CG + SA + F  I  +   SWT M++
Sbjct: 60  ----AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVA 115

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           CY  +  FQ +L+ F +M  V   PN  T   VL +C GL     GKSVH  +++     
Sbjct: 116 CYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCY-- 173

Query: 331 EYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           E D Y+G  L++ Y + G  ++  +V   + + +++ W+ +IS YA+   S+EA+EL  Q
Sbjct: 174 EMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQ 233

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+   ++P+ F+ AS L +C ++ +LQLG Q+H HV+K+    + FV ++L+D+Y+KCG 
Sbjct: 234 MRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGR 293

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + +  LF  +  ++ V WN+MI G+ Q+G+  +A++L+  M    ++  EVT+ + ++A
Sbjct: 294 LDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRA 353

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+++  +E G  +H   +     KD+ +  AL DMYAKCG ++ A+ VFD +SER+ +SW
Sbjct: 354 CASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISW 413

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-R 627
           +AMI  Y MHG + +A   F+ M ++   PN++TF++IL ACS++G ++ G+ YF +M +
Sbjct: 414 NAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ 473

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            +G+EP ++HY CMV LL RSG ++ A K+I  +P   N  +W ALL  C IH  +D+  
Sbjct: 474 DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGI 533

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +++      D   + LLSNIYA    W+    VR  M+  G+KK PG S I
Sbjct: 534 MSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWI 587



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 285/548 (52%), Gaps = 8/548 (1%)

Query: 58  PD--SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           PD  +  +  LI+ Y+ +   +E + L+ ++ RE   ++ F++ ++L+   S+       
Sbjct: 2   PDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H  I K G + +  + T+++  Y   G ++ AR+ FD +  +D+VSW+ ++A Y +N 
Sbjct: 62  SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              + L++F  M   G  P+  T   + +AC  L +    +S+HG VL+   ++D  +G 
Sbjct: 122 RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + +Y+K GD     R F ++ K     W+ MIS Y +S   ++A+E F +M      P
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLP 241

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N  T  +VL SCA +  L+ GK VHC +++ G+     ++  AL++ YA+CG++    K+
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNV-FVSNALMDVYAKCGRLDNSMKL 300

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  RN ++WN +I  Y + G   +AL L   M    +     + +S L AC ++ ++
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 416 QLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           +LG QIH   +K I  KD  V ++LIDMY+KCG    A L+F+ + ++  + WN+MI G+
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKD 533
             +G   EA+  F  M       +++TF++ + ACSN G L+ G+     ++  YG+   
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +   T +  +  + G L  A ++ + +  E NV  W A++    +H  ++      +Q+L
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL 540

Query: 593 DSGIKPNE 600
              I P +
Sbjct: 541 Q--IDPQD 546



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 217/405 (53%), Gaps = 5/405 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA +   G   +    T LI++YA  GS+ S+R  FD     D   W  ++ CY  N+ 
Sbjct: 63  LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F++S+ L+ +M       ++F +  VL+AC  L     G+ VHG ++K  ++ D  +   
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVG 182

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y +FG  +D  +VF++M   DV+ WS +I+ Y  +    E +++F  M R  V P+
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPN 242

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERT 253
             T  S+ ++C  + +L+  + +H HVL  K+ +DG +   N+ + +Y+KCG L ++ + 
Sbjct: 243 QFTFASVLQSCASIENLQLGKQVHCHVL--KVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F+++  R   +W  MI  Y +SG   KAL  +  MLE + + + +T  +VL +CA L  +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             G  +H  +  K +  +   +G ALI+ YA+CG +     V   + ER+ +SWN +IS 
Sbjct: 361 ELGTQIH-SLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           Y+  G+  EAL+    MQ    +P+  +  S LSAC N G L +G
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG 464



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 144/309 (46%), Gaps = 38/309 (12%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + +SC ++  L    ++H H+L  GL  +   S  L++ YA+ G L +S  +F      +
Sbjct: 249 VLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRN 308

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ +   ++++ LY  M+  Q   S   Y SVLRAC+SL  +  G ++H 
Sbjct: 309 EVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHS 368

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K  +DKD V+  +++  Y + G + +AR VFD ++ RD +SW+++I+ Y  +  V E
Sbjct: 369 LSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGE 428

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK F  M      P+ +T +S+  AC     L   +                  N F  
Sbjct: 429 ALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQ------------------NYFKS 470

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
           M    G           IE  C   +T M+    RSG   KA    VK++ E+  EPN+ 
Sbjct: 471 MVQDYG-----------IEP-CMEHYTCMVWLLGRSGHLDKA----VKLIEEIPLEPNVK 514

Query: 299 TLITVLGSC 307
               +LG+C
Sbjct: 515 VWRALLGAC 523



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 11/253 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C +L  +   T++H+  L T    D      LI+ YA+ GS++++RLVFD   E D
Sbjct: 350 VLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERD 409

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +    E++  +  M   +   +   + S+L ACS+ G L  G+    
Sbjct: 410 EISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFK 469

Query: 120 RIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADV 177
            +++  G +      T ++   G  G LD A K+ +++    +V  W +++ +   + DV
Sbjct: 470 SMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDV 529

Query: 178 SEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG-- 234
             G+     +++  ++P D  T + L+             S+   +  + +K +  L   
Sbjct: 530 DLGIMSAQQILQ--IDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWI 587

Query: 235 -NSFIVMYSKCGD 246
            N  IV Y   GD
Sbjct: 588 ENQGIVHYFSVGD 600


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 236/703 (33%), Positives = 380/703 (54%), Gaps = 72/703 (10%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM--T 157
           S+LR C +L +    +  H +I   GF +   + +  +  Y E G   +A  +  ++  +
Sbjct: 35  SLLRQCKTLIN---AKLAHQQIFVHGFTE---MFSYAVGAYIECGASAEAVSLLQRLIPS 88

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
              V  W+++I        + + L  +  M R G  PD  T   + +ACGE+ SLR   S
Sbjct: 89  HSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGAS 148

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT---TSWTAMISCYNR 274
           +H  V    +  +  + NS + MY +CG L  A + F ++ +R      SW ++++ Y +
Sbjct: 149 VHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQ 208

Query: 275 SGWFQKALESFVKM---LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            G  + AL    +M     +K  P+ ITL+ +L +CA +  L+ GK VH   +R G+  +
Sbjct: 209 GGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDD 268

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML--------------------- 370
             ++G AL+  YA+C KM+E  KV   I +++++SWN +                     
Sbjct: 269 V-FVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQ 327

Query: 371 --------------ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
                         I+ YA+KG   EAL++  QMQ +GL P+  ++AS LS C +VG+L 
Sbjct: 328 EEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALL 387

Query: 417 LGLQIHGHVIKI-------DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQ--QKSVVM 466
            G Q H +VIK        D +D+  V + LIDMY+KC    +A  +F+ I+   K+VV 
Sbjct: 388 YGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVT 447

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLN--CLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           W  MI G+ Q+G + +A+ LF Q++     L+ +  T   A+ AC+ +G+L  G+ +H  
Sbjct: 448 WTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLH-- 505

Query: 525 LISYGVRKD-----IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
             +Y +R +     +Y+   L DMY+K GD+  A+ VFD+M  RNVVSW++++  YGMHG
Sbjct: 506 --AYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHG 563

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHY 638
           +  +A  LF QM   G   + +TF+ +L+ACSHSG V++G  YF+ M + FG+ P  +HY
Sbjct: 564 RGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHY 623

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
           ACMVDLL R+G +  A ++I +M       +W ALL+  RIH  I++ +    +L+  G 
Sbjct: 624 ACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGA 683

Query: 699 NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++G YTLLSN+YA    W +  ++RS+M+ TG++K PG S I
Sbjct: 684 ENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWI 726



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 172/639 (26%), Positives = 310/639 (48%), Gaps = 62/639 (9%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L R C  L      H  + V G        +  + +Y E G+   +  +        S
Sbjct: 34  ISLLRQCKTLINAKLAHQQIFVHGF---TEMFSYAVGAYIECGASAEAVSLLQRLIPSHS 90

Query: 61  --FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
             F W  LI+  +     ++++  Y +M R      ++ +P VL+AC  +  L  G  VH
Sbjct: 91  TVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVH 150

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR---DVVSWSSIIASYFDNA 175
             +   G   +  I  SI+  YG  G LDDA ++FD++  R   D+VSW+SI+A+Y    
Sbjct: 151 AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGG 210

Query: 176 DVSEGLKMFHSMVRE---GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
                L++   M       + PD +T++++  AC  + +L+  + +HG  +R  +  D  
Sbjct: 211 QSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVF 270

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +GN+ + MY+KC  +  A + F  I+K+   SW AM++ Y++ G F  AL  F KM++ +
Sbjct: 271 VGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLF-KMMQEE 329

Query: 293 E------------------------------------EPNLITLITVLGSCAGLGWLREG 316
           +                                    EPN++TL ++L  CA +G L  G
Sbjct: 330 DIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYG 389

Query: 317 KSVHCQIIRKGMGPEYD------YLGPALIEFYAECGKMSECEKVIHAI--GERNILSWN 368
           K  H  +I+  +   ++       +   LI+ YA+C        +  +I   ++N+++W 
Sbjct: 390 KQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWT 449

Query: 369 MLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           ++I  YA+ G + +AL+L  Q+  Q   L P++F+++ +L AC  +G L+LG Q+H + +
Sbjct: 450 VMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYAL 509

Query: 427 KIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           + + + E  +V + LIDMYSK G  + A  +F+ ++ ++VV W S++ G+  +G   EA+
Sbjct: 510 RNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEAL 569

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDM 543
           +LF QM      +D +TFL  + ACS+ G +++G    H ++  +G+         + D+
Sbjct: 570 HLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDL 629

Query: 544 YAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
             + G L  A  +  +MS E   V W A++    +H  +
Sbjct: 630 LGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANI 668



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 257/548 (46%), Gaps = 70/548 (12%)

Query: 194 PDFVTMLSLAEACGELCSLRPARS---IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           P  + ++SL   C  L + + A     +HG            + +  +  Y +CG    A
Sbjct: 28  PPTIPLISLLRQCKTLINAKLAHQQIFVHGFT---------EMFSYAVGAYIECGASAEA 78

Query: 251 ERTFVKIEKRCTTS--WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
                ++    +T   W A+I    + G     L  + +M  +   P+  T   VL +C 
Sbjct: 79  VSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACG 138

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER---NIL 365
            +  LR G SVH  +   G+G    ++  +++  Y  CG + +  ++   + ER   +I+
Sbjct: 139 EIPSLRHGASVHAIVCANGLGSNV-FICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIV 197

Query: 366 SWNMLISEYARKGMSKEALELLVQM---QTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           SWN +++ Y + G S+ AL +  +M    +  L PD+ ++ + L AC +V +LQ G Q+H
Sbjct: 198 SWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVH 257

Query: 423 GHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM----------- 470
           G  ++    D+ FV ++L+ MY+KC   N A  +FE I++K VV WN+M           
Sbjct: 258 GFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFD 317

Query: 471 ------------------------ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
                                   I G+ Q G+  EA+++F QM L  LE + VT  + +
Sbjct: 318 SALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLL 377

Query: 507 QACSNIGQLEKGKWVHHKLISYGV-------RKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
             C+++G L  GK  H  +I   +         D+ +   L DMYAKC   + A+ +FDS
Sbjct: 378 SGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDS 437

Query: 560 M--SERNVVSWSAMIDCYGMHGQLNDAASLFKQML--DSGIKPNEVTFMNILWACSHSGS 615
           +   ++NVV+W+ MI  Y  HG+ NDA  LF Q+    + +KPN  T    L AC+  G 
Sbjct: 438 IEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGE 497

Query: 616 VEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           +  G+  +  A+R       L    C++D+ S+SGDI+ A  +  +M    N   W +L+
Sbjct: 498 LRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLM 556

Query: 675 NGCRIHKR 682
            G  +H R
Sbjct: 557 TGYGMHGR 564



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 2/163 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           LI+ Y++ G + ++R VFD  K  +   W  L+  Y  +   EE++ L+ +M +    + 
Sbjct: 524 LIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVD 583

Query: 95  NFIYPSVLRACSSLGDLGSGE-KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
              +  VL ACS  G +  G    H  +   G          ++   G  G L++A ++ 
Sbjct: 584 GITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELI 643

Query: 154 DKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
             M+     V W +++++   +A++  G      +   G E D
Sbjct: 644 KNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAEND 686


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 236/741 (31%), Positives = 387/741 (52%), Gaps = 15/741 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           N  +   +H   + +G+  D      L++ YA+ G L SS  +++  +  D+  W  +++
Sbjct: 207 NFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMR 266

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             ++N   E+++  + +M   + T  N      + A SSLG+L  G+ VHG  IK G+  
Sbjct: 267 GSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKS 326

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
              +  S++  Y +   +  A  +F ++  +D+VSW++++  +  N  + E   +   M 
Sbjct: 327 HVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQ 386

Query: 189 REGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGD 246
           + G  +PD VT+++L   C EL   R  R+IHG+ +RR++  D   L NS I MYSKC  
Sbjct: 387 KVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNL 446

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +  AE  F    ++ T SW AMIS Y+ + + ++A   F +ML      +  T+  +L S
Sbjct: 447 VEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSS 506

Query: 307 CAGLGW--LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RN 363
           C  L    +  GKSVHC  ++ G    +  L   L+  Y  CG ++    ++H      +
Sbjct: 507 CNSLNINSIHFGKSVHCWQLKSGF-LNHILLINILMHMYINCGDLTASFSILHENSALAD 565

Query: 364 ILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           I SWN LI    R    +EALE    M Q   L  DS ++ S+LSAC N+    LG  +H
Sbjct: 566 IASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLH 625

Query: 423 GHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G  +K     D  VQ+SLI MY +C   N A ++F+     ++  WN MI     N  S 
Sbjct: 626 GLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESR 685

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           EA+ LF  +     E +E+T +  + AC+ IG L  GK VH  +    ++ + +I  AL 
Sbjct: 686 EALELFLNLQF---EPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALI 742

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           D+Y+ CG L TA +VF    E++  +W++MI  YG HG+   A  LF +M +SG + ++ 
Sbjct: 743 DLYSNCGRLDTALQVFRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKS 802

Query: 602 TFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           TF+++L ACSHSG V +G +++  M   +GV+P+ +H   +VD+L RSG ++ A++    
Sbjct: 803 TFVSLLSACSHSGLVNQGLWFYECMLERYGVQPETEHQVYVVDMLGRSGRLDEAYEFAKG 862

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
                +  +WGALL+ C  H  + + K I + L      + G+Y  LSN+Y   G+W + 
Sbjct: 863 CD---SSGVWGALLSACNYHGELKLGKKIAQYLFQLEPQNVGHYISLSNMYVAAGSWKDA 919

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
            ++R  ++  GL+K  GYS +
Sbjct: 920 TELRQSIQDLGLRKTAGYSLV 940



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 183/703 (26%), Positives = 338/703 (48%), Gaps = 12/703 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           T  H   L  G     P ST L+  Y++ G   SS+ +FD  +  D+  W  ++   + N
Sbjct: 111 TVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLEN 170

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             +  ++  + KMI+ Q    +     ++ A   + +   G  +H   IK G   D  + 
Sbjct: 171 KCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLG 230

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y + G L  +  +++++  +D VSW+SI+     N    + L  F  M      
Sbjct: 231 NALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEET 290

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D V++     A   L  L   +S+HG  ++   K    + NS I +YS+C D+ +AE  
Sbjct: 291 ADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETL 350

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-EEPNLITLITVLGSCAGLGW 312
           F +I  +   SW AM+  +  +G  ++  +  V+M +V   +P+++TLIT+L  CA L  
Sbjct: 351 FREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELML 410

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
            REG+++H   IR+ M  ++  L  +LI  Y++C  + + E + ++  E++ +SWN +IS
Sbjct: 411 SREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMIS 470

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG--NVGSLQLGLQIHGHVIKIDC 430
            Y+    S+EA  L  +M  WG    S +V + LS+C   N+ S+  G  +H   +K   
Sbjct: 471 GYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGF 530

Query: 431 KDEFVQ-SSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            +  +  + L+ MY  CG    ++ +L E      +  WN++I G  +  +  EA+  F+
Sbjct: 531 LNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETFN 590

Query: 489 QMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            M     L  D +T ++A+ AC+N+     GK +H   +   +  D  +  +L  MY +C
Sbjct: 591 LMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRC 650

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            D+ +A+ VF   S  N+ SW+ MI     + +  +A  LF   L+   +PNE+T + +L
Sbjct: 651 RDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELF---LNLQFEPNEITIIGVL 707

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+  G +  GK     +    ++ +    A ++DL S  G ++ A ++        + 
Sbjct: 708 SACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAK-EKSE 766

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGT--NDNGYYTLLS 708
           S W ++++    H + +    +  E+  +G   + + + +LLS
Sbjct: 767 SAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLS 809



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 172/658 (26%), Positives = 294/658 (44%), Gaps = 44/658 (6%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           ++ C     + +    H   +K G        TS+L  Y + G    ++ +FD++ +RD 
Sbjct: 98  IKLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDA 157

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           ++W++I+A+  +N      +  F  M++     D  T+L +  A   + +    R+IH  
Sbjct: 158 IAWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCV 217

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI--SCYNRSGWFQ 279
            ++  + +D  LGN+ + MY+KCGDL S+E  + +IE +   SW +++  S YNR    +
Sbjct: 218 SIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHP--E 275

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           KAL  F +M   +E  + ++L   + + + LG L  G+SVH   I+ G       +  +L
Sbjct: 276 KALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVS-VANSL 334

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM-PD 398
           I  Y++C  +   E +   I  ++I+SWN ++  +A  G  KE  +LLVQMQ  G   PD
Sbjct: 335 ISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPD 394

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLF 456
             ++ + L  C  +   + G  IHG+ I+     + V   +SLI MYSKC     A LLF
Sbjct: 395 IVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLF 454

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS--NIGQ 514
               +K  V WN+MI G+  N  S EA NLF +M          T    + +C+  NI  
Sbjct: 455 NSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINS 514

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMID 573
           +  GK VH   +  G    I +   L  MY  CGDL  +  +    S   ++ SW+ +I 
Sbjct: 515 IHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIV 574

Query: 574 CYGMHGQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEGKFY---------- 622
                    +A   F  M  +  +  + +T ++ L AC++      GK            
Sbjct: 575 GCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLG 634

Query: 623 ------------------FNAMRI---FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
                              N+ ++   F   P+L  + CM+  LS + +   A ++  ++
Sbjct: 635 SDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNL 694

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT-LLSNIYAEEGNWD 718
            F  N      +L+ C     +   K +   +  T   DN + +  L ++Y+  G  D
Sbjct: 695 QFEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLD 752



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 8/199 (4%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +CT    LR   ++HAH+  T +  +   S  LI+ Y+  G L ++  VF   KE  
Sbjct: 706 VLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEKS 765

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y ++   E++I L+H+M    A +S   + S+L ACS  G +  G   + 
Sbjct: 766 ESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWFYE 825

Query: 120 RII-KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            ++ + G   +   Q  ++   G  G LD+A +      S  V  W +++++   + ++ 
Sbjct: 826 CMLERYGVQPETEHQVYVVDMLGRSGRLDEAYEFAKGCDSSGV--WGALLSACNYHGELK 883

Query: 179 EGLKMFHSMVREGVEPDFV 197
            G K+   + +  +EP  V
Sbjct: 884 LGKKIAQYLFQ--LEPQNV 900


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/731 (30%), Positives = 371/731 (50%), Gaps = 8/731 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H +++  GL  +    T L+  Y   GS+  +  +F+  +EP+   W  L+ CY  N 
Sbjct: 270 QIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNG 329

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQ 133
             +E + +Y  +       +     +V+R C   GD   G ++ G +IK G D   V + 
Sbjct: 330 HTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            S++  +G +  +++A +VF+ M  RD +SW+SII +   N    E L  F  M R   +
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D++T+ +L  ACG    L+  R +HG + +  ++ +  + NS + MY++ G    AE  
Sbjct: 450 TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +  R   SW +M++ +   G +  A+   V+ML+ ++  N +T  T L +C  L  L
Sbjct: 510 FHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL 569

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
              K VH  +I   +      +G  L+  Y + G M E +KV   + ER++++WN LI  
Sbjct: 570 ---KIVHAFVIHFAVHHNL-IIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGG 625

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHGHVIKIDCK- 431
           +A        ++    M+  GL+ +  ++ + L  C +   L + G+ IH H++    + 
Sbjct: 626 HADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFEL 685

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D +VQSSLI MY++CG  N +  +F+ +  K+   WN++       G   EA+    +M 
Sbjct: 686 DTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMR 745

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            + +++D+ +F  A+    N+  L++G+ +H  +I  G   D Y+  A  DMY KCG++ 
Sbjct: 746 NDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEID 805

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
              R+      R+  SW+ +I     HG    A   F +MLD G+KP+ VTF+++L ACS
Sbjct: 806 DVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS 865

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G V+EG  YF++M   FGV   ++H  C++DLL RSG +  A   I  MP P N  +W
Sbjct: 866 HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVW 925

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
            +LL  C++H  +++ +     L    ++D+  Y L SN+ A    W +   VR  ME  
Sbjct: 926 RSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQ 985

Query: 731 GLKKVPGYSTI 741
            LKK P  S I
Sbjct: 986 SLKKKPACSWI 996



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/653 (24%), Positives = 317/653 (48%), Gaps = 11/653 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  +   +  +   +  L+  Y++ GS++ ++ VFD   + +   W  +I  ++   +
Sbjct: 169 LHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGW 228

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK-VHGRIIKCGFDKDDVIQT 134
           + +++  +  M     T S+++  S++ AC   G +  G + +HG ++KCG   +  + T
Sbjct: 229 YHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGT 288

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S+L  YG  G + +A K+F+++   ++VSW+S++  Y DN    E L ++  +   G+  
Sbjct: 289 SLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLIC 348

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVMYSKCGDLLSAERT 253
              TM ++   CG          I G V++  +      + NS I M+     +  A R 
Sbjct: 349 TGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRV 408

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +++R T SW ++I+    +G F+++L  F  M     + + IT+  +L +C     L
Sbjct: 409 FNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHL 468

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           + G+ +H  I + G+      +  +L+  YA+ G   + E V H +  R+++SWN +++ 
Sbjct: 469 KWGRGLHGLITKSGLESNV-CVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMAS 527

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
           +   G    A+ LLV+M       +  +  ++LSAC N+  L++   +H  VI       
Sbjct: 528 HVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHN 584

Query: 434 F-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             + ++L+ MY K G  + A  + + + ++ VV WN++I G   + +    I  F+ M  
Sbjct: 585 LIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRR 644

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
             L  + +T +  +  C +   L K G  +H  ++  G   D Y+ ++L  MYA+CGDL 
Sbjct: 645 EGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLN 704

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           T+  +FD ++ +N  +W+A+      +G   +A     +M + G+  ++ +F   L    
Sbjct: 705 TSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIG 764

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +   ++EG+   + +   G E D       +D+  + G+I+  F++   +P P
Sbjct: 765 NLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRI---LPIP 814



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 163/616 (26%), Positives = 285/616 (46%), Gaps = 16/616 (2%)

Query: 66  LIKCYMWNNFFEESILLYHKMIREQAT--ISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           L  C   N F    I   H  IR  +   +S F+     +  S + +   G+ +H   +K
Sbjct: 123 LETCVKENEFLSYGI---HTFIRNHSNPQVSRFLQ----KGFSEISEGNVGKALHALCVK 175

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
               ++     +++  Y +FG +  A+ VFDKM  R+  SW+++I+ +       + ++ 
Sbjct: 176 DVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQF 235

Query: 184 FHSMVREGVEPDFVTMLSLAEACGEL-CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           F  M   GV P    + S+  AC    C    AR IHG+V++  +  +  +G S +  Y 
Sbjct: 236 FCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYG 295

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
             G +  A + F +IE+    SWT+++ CY  +G  ++ L  +  +          T+ T
Sbjct: 296 THGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMAT 355

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           V+ +C   G    G  +   +I+ G+      +  +LI  +     + E  +V + + ER
Sbjct: 356 VIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQER 415

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + +SWN +I+  A  G  +E+L     M+      D  ++++ L ACG+   L+ G  +H
Sbjct: 416 DTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLH 475

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G + K   +    V +SL+ MY++ G    A L+F  +  + ++ WNSM+    ++G   
Sbjct: 476 GLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYS 535

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            AI L  +M      M+ VTF TA+ AC N   LEK K VH  +I + V  ++ I   L 
Sbjct: 536 HAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNLIIGNTLV 592

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
            MY K G +  AQ+V   M ER+VV+W+A+I  +      N     F  M   G+  N +
Sbjct: 593 TMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYI 652

Query: 602 TFMNILWAC-SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           T +N+L  C S    ++ G      + + G E D    + ++ + ++ GD+  +   I  
Sbjct: 653 TIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTS-SYIFD 711

Query: 661 MPFPANGSIWGALLNG 676
           +    N S W A+ + 
Sbjct: 712 VLANKNSSTWNAIFSA 727



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 217/420 (51%), Gaps = 5/420 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S  +L+    LH  +  +GL  +      L+  YA+ GS   + LVF T    D 
Sbjct: 459 LPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDL 518

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  ++ +  +  +ILL  +M++ +  ++   + + L AC +L  L   + VH  
Sbjct: 519 ISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAF 575

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I      + +I  +++  YG+FG +D+A+KV   M  RDVV+W+++I  + D+ D +  
Sbjct: 576 VIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNAT 635

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           ++ F+ M REG+  +++T+++L   C      L+    IH H++    ++D  + +S I 
Sbjct: 636 IQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLIT 695

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY++CGDL ++   F  +  + +++W A+ S     G  ++AL+   +M     + +  +
Sbjct: 696 MYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFS 755

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
               L +   L  L EG+ +H  II+ G   + +Y+  A ++ Y +CG++ +  +++   
Sbjct: 756 FSVALATIGNLTVLDEGQQLHSWIIKLGFELD-EYVLNATMDMYGKCGEIDDVFRILPIP 814

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+  SWN+LIS  AR G  ++A E   +M   GL PD  +  S LSAC + G +  GL
Sbjct: 815 KIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGL 874


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/570 (35%), Positives = 327/570 (57%), Gaps = 4/570 (0%)

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           +D+   L  F +M   G  P   T  SL + C     L   R++H  +  R I  +    
Sbjct: 38  SDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAA 97

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-E 293
            +   MY+KC     A R F ++  R   +W A+++ Y R+G  + A+E  V+M E + E
Sbjct: 98  TALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE 157

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            P+ ITL++VL +CA    L   +  H   IR G+  E   +  A+++ Y +CG +    
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGL-EELVNVATAILDAYCKCGDIRAAR 216

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            V   +  +N +SWN +I  YA+ G S+EAL L  +M   G+     SV ++L ACG +G
Sbjct: 217 VVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELG 276

Query: 414 SLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L  G+++H  +++I       V ++LI MYSKC   +LA  +F+ + +++ V WN+MI 
Sbjct: 277 CLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMIL 336

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G  QNG S +A+ LF +M L  ++ D  T ++ I A ++I    + +W+H   I   + +
Sbjct: 337 GCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+Y+ TAL DMYAKCG +  A+ +F+S  ER+V++W+AMI  YG HG    A  LF++M 
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDI 651
             GI PNE TF+++L ACSH+G V+EG+ YF +M+  +G+EP ++HY  MVDLL R+G +
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           + A+  I  MP     S++GA+L  C++HK +++ +   +++   G  +  Y+ LL+NIY
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A    W +  +VR+ ME  GL+K PG+S I
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSII 606



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 222/430 (51%), Gaps = 12/430 (2%)

Query: 2   PLFRSCTNLRKL----------TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLV 51
           P+ R+ T+L KL            +HA L   G+  +  A+T L   YA+      +R V
Sbjct: 57  PVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRV 116

Query: 52  FDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGD 110
           FD     D   W  L+  Y  N     ++ +  +M  E+    + I   SVL AC++   
Sbjct: 117 FDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARA 176

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L +  + H   I+ G ++   + T+IL  Y + G +  AR VFD M +++ VSW+++I  
Sbjct: 177 LAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDG 236

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           Y  N D  E L +F+ MV EGV+   V++L+  +ACGEL  L     +H  ++R  +  +
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             + N+ I MYSKC  +  A   F ++++R   SW AMI    ++G  + A+  F +M  
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              +P+  TL++V+ + A +    + + +H   IR  +  +  Y+  ALI+ YA+CG+++
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV-YVLTALIDMYAKCGRVN 415

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               + ++  ER++++WN +I  Y   G  K A+EL  +M++ G++P+  +  S LSAC 
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475

Query: 411 NVGSLQLGLQ 420
           + G +  G +
Sbjct: 476 HAGLVDEGRE 485



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 173/337 (51%), Gaps = 2/337 (0%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFF 76
           HA  + +GL      +T ++++Y + G +R++R+VFD     +S  W  +I  Y  N   
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
            E++ L+++M+ E   +++    + L+AC  LG L  G +VH  +++ G D +  +  ++
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNAL 303

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  Y +   +D A  VFD++  R  VSW+++I     N    + +++F  M  E V+PD 
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
            T++S+  A  ++     AR IHG+ +R  +  D  +  + I MY+KCG +  A   F  
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
             +R   +W AMI  Y   G+ + A+E F +M  +   PN  T ++VL +C+  G + EG
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 317 KSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSEC 352
           +     +    G+ P  ++ G  +++     GK+ E 
Sbjct: 484 REYFTSMKEDYGLEPGMEHYG-TMVDLLGRAGKLDEA 519


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/748 (30%), Positives = 390/748 (52%), Gaps = 32/748 (4%)

Query: 6   SCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-- 60
           +C+NL  L R    H  ++ TG          L+  Y + GS+  +RLVF+  +  D   
Sbjct: 237 ACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLS 296

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W V+I  +  N    E+ +L++KM  E    +   + +VLRAC++L      EK+  
Sbjct: 297 VYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQC---EKIFA 353

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVS 178
           R+   G + D  + T+ + T+ + G L  AR VF+ + +SR+VVSW+ +I +Y     + 
Sbjct: 354 RVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIR 413

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
               ++  M     EP+ VT +++ ++C     L  A  IH H++    + D  L    +
Sbjct: 414 AAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLV 470

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG + SA   F  +++R   +W +M+S +  +G ++++L+ + +ML    +P+ I
Sbjct: 471 TMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKI 530

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP-ALIEFYAECGKMSECEKVIH 357
           T + VL +C  +   R   +            E D     A +  YA CG + E +    
Sbjct: 531 TYLAVLDACQSVSEARRYAAT--------FELELDIAARNAAVSAYARCGSLKEAKAAFD 582

Query: 358 AIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           AI  + N ++WN +IS  A+ G SK+ALE   +M+  G+  +S +  +SL AC ++  L 
Sbjct: 583 AIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLT 642

Query: 417 LGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G Q+H  ++  +  +  + +++I+MY KCG  + A   F ++ ++ V+ WN+MI  + Q
Sbjct: 643 RGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQ 702

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG--VRKDI 534
           +G+  +A+  F QM L     D  T+L AI AC ++  L  GK +H  + +    + +D 
Sbjct: 703 HGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDP 762

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            + TAL  MYA+CG L  A+ VF     RN+V+WS +I     HG+ N+A  LF++M   
Sbjct: 763 GVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQ 822

Query: 595 GIKPNEVTFMNILWACSHSGSVEE-GKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
           G KP+ +TF  ++ ACS  G V++ G+  F+A+ R++ V    +HY CMV++L R+G +E
Sbjct: 823 GTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLE 882

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY---YTLLSN 709
            A  +I  MP  A+G+IW ALL  C  ++R D+ + I         +   +     +L+ 
Sbjct: 883 EAEGLIQGMPRKASGAIWMALLAAC--NRRGDLERGIRAANRAQQLDPGSFAASMAMLAE 940

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           +Y   G W++  +VR  +E    ++ PG
Sbjct: 941 LYGAAGRWEDAARVRKAVESRNARREPG 968



 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 186/656 (28%), Positives = 330/656 (50%), Gaps = 26/656 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H H+L +G   +      LI  YA+ G L+ +  VF+    P+ F W  LI  Y     
Sbjct: 48  VHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGH 107

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E +  + KM  +      F++ +VL ACSS G L  G+ +H  ++  G +   V+  +
Sbjct: 108 LREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMET-QVVGNA 166

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEP 194
           I+  YG+ G + +A+ VF+++  R++VSW+++IA+   N    + +++F  M  +G V P
Sbjct: 167 IVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRP 226

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T +S+ +AC  L  L   +S H  ++R        +GNS + MY KCG +  A   F
Sbjct: 227 NDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVF 286

Query: 255 VKIEKR---CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
            K+  R      SWT +I+ +  +G   +A   F KM      PN +T +TVL +C  L 
Sbjct: 287 EKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLA 346

Query: 312 WLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNM 369
              + + +  ++  K +G E D  LG A +  +A+ G ++    V   +G  RN++SW +
Sbjct: 347 ---QCEKIFARV--KHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTV 401

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I  YA++G  + A +L  +M      P++ +  + + +C     L    QIH H++   
Sbjct: 402 MIWAYAQQGFIRAAFDLYKRMDC---EPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASG 458

Query: 430 CKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            + + V Q  L+ MY KCG  + A+ +FE ++++SVV WNSM+  F  NG    ++ L+ 
Sbjct: 459 FESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYE 518

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M L   + D++T+L  + AC ++ +  +         ++ +  DI    A    YA+CG
Sbjct: 519 RMLLEGTKPDKITYLAVLDACQSVSEARR------YAATFELELDIAARNAAVSAYARCG 572

Query: 549 DLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            L+ A+  FD++  + N V+W+AMI     HG+   A   F +M   G++ N VT++  L
Sbjct: 573 SLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASL 632

Query: 608 WACSHSGSVEEGKFYFNAMRIFGV-EPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            ACS    +  G+     + +  + E +L +   ++++  + G ++ A      MP
Sbjct: 633 EACSSLKDLTRGRQLHARILLENIHEANLSN--AVINMYGKCGSLDEAMDEFVKMP 686



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 300/589 (50%), Gaps = 20/589 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S+L+ C+      +G+ VH  I+  G   +  +Q  ++  Y + GCL DA +VF+ + 
Sbjct: 29  YASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLP 88

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             +V SW+++I +Y     + E L  F  M  +G +PD     ++  AC    +L   ++
Sbjct: 89  CPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  V+   ++    +GN+ + +Y KCG +  A+  F ++ +R   SW A+I+   ++G 
Sbjct: 149 IHDCVVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207

Query: 278 FQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            + A++ F  M L+    PN  T ++V+ +C+ L  L  GKS H +IIR G    Y ++G
Sbjct: 208 CKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGF-DSYLFVG 266

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNIL---SWNMLISEYARKGMSKEALELLVQMQTW 393
            +L+  Y +CG +     V   +  R++L   SW ++I+ +A  G   EA  L  +M   
Sbjct: 267 NSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLE 326

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           G++P+  +  + L AC  +   +   +I   V  +  + D  + ++ +  ++K G    A
Sbjct: 327 GVLPNKVTFVTVLRACTTLAQCE---KIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAA 383

Query: 453 YLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             +FE +   ++VV W  MI  + Q G    A +L+ +M  +C E + VTF+  + +C  
Sbjct: 384 RDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM--DC-EPNAVTFMAVMDSCLR 440

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
              L + + +H  +++ G   D+ +   L  MY KCG + +A  +F+++ ER+VV+W++M
Sbjct: 441 PEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSM 500

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           +  +  +G    +  L+++ML  G KP+++T++ +L AC    SV E + Y      F +
Sbjct: 501 LSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQ---SVSEARRY---AATFEL 554

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           E D+      V   +R G ++ A     ++ +  N   W A+++G   H
Sbjct: 555 ELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQH 603



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 7/197 (3%)

Query: 483 AINLFHQMYLNCLE-----MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           A  L  Q ++N L+     +    + + +Q C+       GK VH  ++S G   + Y+ 
Sbjct: 5   ATELSLQTHINQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQ 64

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
             L  MYAKCG LQ A  VF+ +   NV SW+A+I  Y   G L +    F++M   G K
Sbjct: 65  NHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTK 124

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+   F  +L ACS +G++ EGK   + + + G+E  +   A +V+L  + G +  A  +
Sbjct: 125 PDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQVVGNA-IVNLYGKCGRVHEAKAV 183

Query: 658 IHSMPFPANGSIWGALL 674
              +P   N   W AL+
Sbjct: 184 FERLP-ERNLVSWNALI 199


>gi|125570343|gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
          Length = 920

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/697 (32%), Positives = 378/697 (54%), Gaps = 8/697 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF+ C ++R L ++HA++   GL +D    ++++  YA +G+L  SRLVF      D  +
Sbjct: 54  LFQGCADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISL 113

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W   +  Y    + EE I+LY ++   Q   +      V+++C+ L +L  G+ VH   +
Sbjct: 114 WNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSL 173

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD--VSEG 180
           K     +  + +S++  Y +F   +D+R VF+++ ++D+V+++S+I  Y +  D      
Sbjct: 174 KLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNA 233

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIV 239
            ++   M++  +E + VT++SL +  G L +L+  +S+H + +RR I + D  L  S + 
Sbjct: 234 FEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVN 293

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
            Y++CG   SA  T ++  K    SW A++S  NR+G    A++    ML E K  P+ +
Sbjct: 294 FYTRCGAYQSAA-TVLQNSKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSV 352

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T   VL +CA L +     S+H   IR+ + P    L  ALIE Y +C ++   + +   
Sbjct: 353 TFANVLSACAELCYFCFAASIHAYFIRRFI-PMDVVLTTALIEVYTKCTRVMRSKYLFDQ 411

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++++S+N +I  Y +  M+ EA  LL  M   G+ PD  +V S L+A  +   L  G
Sbjct: 412 LIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRG 471

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             IHG  I+   C D  V++ ++ MYS CG    A  +F+ +++K++V W +M+ G   N
Sbjct: 472 RWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSN 531

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G++ E + LF  M     + D V+ +TA+QA S++G L   K +H  +    + KD    
Sbjct: 532 GHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITA 591

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L   YAKCG L  +  +F S+  RN+ +W+AMI  Y MHG   +   +FKQM +  I+
Sbjct: 592 NSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQ 651

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           P+E+TF  +L ACSH+G V++G   FN+M  ++ V P  +HY CMVDLL R+G +E  +K
Sbjct: 652 PDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYK 711

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            I         +I+ ALL+ CR H    +   I KEL
Sbjct: 712 FIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKEL 748


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/692 (32%), Positives = 371/692 (53%), Gaps = 9/692 (1%)

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E +   W   I         ++++  + +M+R     +   Y + + AC+          
Sbjct: 3   ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  I+K GF     + + ++  Y +   + +AR +FD M  RD VSW+S+IA Y     
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122

Query: 177 VSEGLKMFHSMVREG-----VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
             E   +F SM+        +  DF T+ ++ +ACG L   R  + +HG+ ++     D 
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDF-TLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDL 181

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            +  S + MY KCG L  A   F +IE +   +W  MI+ Y ++ + ++A+E F +M   
Sbjct: 182 FVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELE 241

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +PN  T   VL +   +     G+  H ++++ G   +  ++  AL++ Y++   + +
Sbjct: 242 GFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDV-FVATALVDMYSKFYDIED 300

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            E+    + +RN++S+N LI+ Y+  G  +EAL +  Q+Q+ G+ PDSF+     S+C  
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360

Query: 412 VGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
             ++  G Q+H H +K     D  V +S+++ YSKCGF + A   FE I + + V W  +
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGI 420

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I GF QNG   +A+  F +M     + DE +  + I+A S+   +E+G+ +H  ++  G+
Sbjct: 421 ISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGL 480

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
              IY+ +A+ DMY+KCG ++ AQ+VF  M E+NVVSW++MI  Y  +G   +A  LF++
Sbjct: 481 DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQE 540

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M  SGI P  VTF+ IL+ACSH+G VEEG+ ++N M   +G+ P ++H  CMVDLL R+G
Sbjct: 541 MTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAG 600

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            +E A   + S  F     IWG+LL+ C +HK  DV     +       + +  YT LSN
Sbjct: 601 YLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSN 660

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           IYA +  W E  ++R +M+  G++K PG S I
Sbjct: 661 IYASKELWSEVSRIRDLMKDMGVEKEPGCSWI 692



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 170/573 (29%), Positives = 297/573 (51%), Gaps = 10/573 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           T LH  +L  G       S+ LI  Y++   ++ +R +FD   E D   W  +I  Y   
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 74  NFFEESILLYHKMIRE----QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              EE+  L+  MI      +  +S+F   +VL+AC  LG    G+ VHG  +K GFD D
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +  S +  Y + G LD A   FD++ ++D+V+W+++I  Y  N    E +++F+ M  
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           EG +P+  T   + +A   +      R  H  VL+    +D  +  + + MYSK  D+  
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
            ER F ++ KR   S+ A+I+ Y+  G +++AL  + ++     EP+  T + +  SC+ 
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
              + EG  VH   ++ G+  +   +G +++ FY++CG      +   +I   N + W  
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVS-VGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAG 419

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-- 427
           +IS +A+ G  ++AL    +M+ +    D FS +S + A  +  +++ G  +H HV+K  
Sbjct: 420 IISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSG 479

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
           +DC   +V S++IDMYSKCG    A  +F  + +K+VV WNSMI G+ QNG   EA+ LF
Sbjct: 480 LDCTI-YVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLF 538

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAK 546
            +M  + +    VTF+  + ACS+ G +E+G+  ++ ++ +YG+   +   T + D+  +
Sbjct: 539 QEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGR 598

Query: 547 CGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
            G L+ A+    S S  +    W +++   G+H
Sbjct: 599 AGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVH 631



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 260/528 (49%), Gaps = 11/528 (2%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP- 214
           M   +VV W+S I        V + L  F  M+R G+EP+ +T  +   AC +  S RP 
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQ--STRPS 58

Query: 215 -ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
            A S+H  +L++       + +  I MYSK   +  A   F  + +R   SW +MI+ Y+
Sbjct: 59  LATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYS 118

Query: 274 RSGWFQKALESFVKMLEVKEEPNLI----TLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + G  ++A   F  M+   E   L+    TL TVL +C GLG  R GK VH   ++ G  
Sbjct: 119 QRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFD 178

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  ++  + +  Y +CG +         I  ++I++WN +I+ YA+    +EA+EL  Q
Sbjct: 179 SDL-FVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQ 237

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+  G  P+  +    L A   +    +G   H  V+K+ C  D FV ++L+DMYSK   
Sbjct: 238 MELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYD 297

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
                  F  + ++++V +N++I G+   G   EA+ ++ Q+    +E D  TF+    +
Sbjct: 298 IEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSS 357

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           CS    + +G  VH   + +G+  D+ +  ++ + Y+KCG   +A   F+S++  N V W
Sbjct: 358 CSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCW 417

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           + +I  +  +G+   A   F +M     K +E +  +++ A S   +VE+G+     +  
Sbjct: 418 AGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMK 477

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            G++  +   + ++D+ S+ G +E A K+   MP   N   W +++ G
Sbjct: 478 SGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMITG 524



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 245/473 (51%), Gaps = 14/473 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H + +  G   D   S   +  Y + G L  + L FD  +  D   W  +I  Y  N +
Sbjct: 168 VHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCY 227

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE+I L+++M  E    ++  +  VL+A +++ D   G   H +++K G   D  + T+
Sbjct: 228 EEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATA 287

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +F  ++D  + F +M+ R++VS++++I  Y       E L+++  +  EG+EPD
Sbjct: 288 LVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPD 347

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T + L  +C    ++     +H H ++  +  D  +GNS +  YSKCG   SA   F 
Sbjct: 348 SFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFE 407

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I +  +  W  +IS + ++G  +KAL  F KM +  ++ +  +  +V+ + +    + +
Sbjct: 408 SINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQ 467

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H  +++ G+     Y+G A+I+ Y++CG + + +KV   + E+N++SWN +I+ YA
Sbjct: 468 GRHLHAHVMKSGLDCTI-YVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYA 526

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG-----LQIHGHVIKIDC 430
           + G  KEAL L  +M + G++P + +    L AC + G ++ G     L +H + I    
Sbjct: 527 QNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSM 586

Query: 431 KDEFVQSSLIDMYSKCGF--KNLAYLLFERIQQKSVVMWNSMI--CGFYQNGN 479
           +     + ++D+  + G+  +  A+LL     ++  + W S++  CG ++N +
Sbjct: 587 EH---CTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGI-WGSLLSACGVHKNSD 635


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/570 (35%), Positives = 327/570 (57%), Gaps = 4/570 (0%)

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           +D+   L  F +M   G  P   T  SL + C     L   R++H  +  R I  +    
Sbjct: 38  SDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAA 97

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-E 293
            +   MY+KC     A R F ++  R   +W A+++ Y R+G  + A+E  V+M E + E
Sbjct: 98  TALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE 157

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            P+ ITL++VL +CA    L   +  H   IR G+  E   +  A+++ Y +CG +    
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGL-EELVNVATAILDAYCKCGDIRAAR 216

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            V   +  +N +SWN +I  YA+ G S+EAL L  +M   G+     SV ++L ACG +G
Sbjct: 217 VVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELG 276

Query: 414 SLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L  G+++H  +++I       V ++LI MYSKC   +LA  +F+ + +++ V WN+MI 
Sbjct: 277 CLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMIL 336

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G  QNG S +A+ LF +M L  ++ D  T ++ I A ++I    + +W+H   I   + +
Sbjct: 337 GCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+Y+ TAL DMYAKCG +  A+ +F+S  ER+V++W+AMI  YG HG    A  LF++M 
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDI 651
             GI PNE TF+++L ACSH+G V+EG+ YF +M+  +G+EP ++HY  MVDLL R+G +
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           + A+  I  MP     S++GA+L  C++HK +++ +   +++   G  +  Y+ LL+NIY
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A    W +  +VR+ ME  GL+K PG+S I
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSII 606



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 221/428 (51%), Gaps = 12/428 (2%)

Query: 2   PLFRSCTNLRKL----------TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLV 51
           P+ R+ T+L KL            +HA L   G+  +  A+T L   YA+      +R V
Sbjct: 57  PVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRV 116

Query: 52  FDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGD 110
           FD     D   W  L+  Y  N     ++ +  +M  E+    + I   SVL AC++   
Sbjct: 117 FDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARA 176

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L +  + H   I+ G ++   + T+IL  Y + G +  AR VFD M +++ VSW+++I  
Sbjct: 177 LAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDG 236

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           Y  N D  E L +F+ MV EGV+   V++L+  +ACGEL  L     +H  ++R  +  +
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             + N+ I MYSKC  +  A   F ++++R   SW AMI    ++G  + A+  F +M  
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              +P+  TL++V+ + A +    + + +H   IR  +  +  Y+  ALI+ YA+CG+++
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV-YVLTALIDMYAKCGRVN 415

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               + ++  ER++++WN +I  Y   G  K A+EL  +M++ G++P+  +  S LSAC 
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475

Query: 411 NVGSLQLG 418
           + G +  G
Sbjct: 476 HAGLVDEG 483



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 173/337 (51%), Gaps = 2/337 (0%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFF 76
           HA  + +GL      +T ++++Y + G +R++R+VFD     +S  W  +I  Y  N   
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
            E++ L+++M+ E   +++    + L+AC  LG L  G +VH  +++ G D +  +  ++
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNAL 303

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  Y +   +D A  VFD++  R  VSW+++I     N    + +++F  M  E V+PD 
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
            T++S+  A  ++     AR IHG+ +R  +  D  +  + I MY+KCG +  A   F  
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
             +R   +W AMI  Y   G+ + A+E F +M  +   PN  T ++VL +C+  G + EG
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 317 KSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSEC 352
           +     +    G+ P  ++ G  +++     GK+ E 
Sbjct: 484 REYFTSMKEDYGLEPGMEHYG-TMVDLLGRAGKLDEA 519


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/714 (29%), Positives = 364/714 (50%), Gaps = 46/714 (6%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN 95
           I +    G L ++R +     + ++  W  +I     ++   E++ +Y  M++E    +N
Sbjct: 83  ISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTN 142

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           F   SVL AC ++  L  G + HG  +K G D +  ++  +L  Y + G + DA ++FD 
Sbjct: 143 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDW 202

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS---- 211
           M+S + VS+++++     +  V + L++F  M R  +  D V + S+  AC + C+    
Sbjct: 203 MSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYN 262

Query: 212 ----LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
               +R A+SIH  V+R+    D  +GNS I MY+K   +  A + F  +      SW  
Sbjct: 263 VARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNI 322

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +++ Y + G +++ALE    M E   EPN +T   +L SC                    
Sbjct: 323 LVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCI------------------- 363

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                            +   +     +   I + ++ +WN L+S Y ++ + ++ +EL 
Sbjct: 364 -----------------KARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELF 406

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKC 446
            +MQ   + PD  ++A  LS C  +G L+LG Q+H   +K+    D FV S LIDMYSKC
Sbjct: 407 RRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKC 466

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G   +A ++F  + ++ VV WNSMI G   +  + EA + F QM  N +   E ++ + I
Sbjct: 467 GQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMI 526

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            +C+ +  + +G+ +H +++  G  +++Y+ ++L DMYAKCG++  A+  F+ M  +N+V
Sbjct: 527 NSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIV 586

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           +W+ MI  Y  +G    A  LF+ ML +  KP+ VTF+ +L  CSHSG V+E   YFN+M
Sbjct: 587 AWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSM 646

Query: 627 RI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
              +G+ P ++HY C++D L R+G       +I  MP+  +  +W  LL  C +H   ++
Sbjct: 647 ESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAEL 706

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            +   K L      +   Y LLSNIYA  G   +   VR++M   G+ K  GYS
Sbjct: 707 GEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYS 760



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 159/296 (53%), Gaps = 9/296 (3%)

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A I      G ++    ++  + +RN +SWN +I+  AR     EALE+   M   GL P
Sbjct: 81  AAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAP 140

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
            +F++AS LSACG V +L  G + HG  +K+    ++FV++ L+ MY+KCG    A  LF
Sbjct: 141 TNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLF 200

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS------ 510
           + +   + V + +M+ G  Q+G   +A+ LF +M  + + +D V   + + AC+      
Sbjct: 201 DWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGD 260

Query: 511 -NIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
            N+ + +   + +H  ++  G   D ++  +L DMYAK   +  A +VF+SMS  ++VSW
Sbjct: 261 YNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSW 320

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           + ++  YG  G    A  +   M +SG +PNEVT+ N+L +C  +  V   +  F+
Sbjct: 321 NILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFD 376



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 207/455 (45%), Gaps = 46/455 (10%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ I    + GDL +A     ++  R   SW  +I+   RS    +ALE +  ML+    
Sbjct: 80  NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLA 139

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P   TL +VL +C  +  L +G+  H   ++ G+     ++   L+  Y +CG +++  +
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGN-QFVENGLLGMYTKCGSVADAVR 198

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG---- 410
           +   +   N +S+  ++   A+ G   +AL L  +M    +  D  +V+S L AC     
Sbjct: 199 LFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACA 258

Query: 411 ---NVG-SLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
              NV  +++L   IH  V++     D+ V +SLIDMY+K    + A  +FE +   S+V
Sbjct: 259 GDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIV 318

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN ++ G+ Q G    A+ +   M  +  E +EVT+   + +C                
Sbjct: 319 SWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASC---------------- 362

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
                               K  D+ +A+ +FD +S+ +V +W+ ++  YG      D  
Sbjct: 363 -------------------IKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTI 403

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLL 645
            LF++M    ++P+  T   IL  CS  G +E GK   +A     +  D+   + ++D+ 
Sbjct: 404 ELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMY 463

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           S+ G + G  ++I +M    +   W ++++G  IH
Sbjct: 464 SKCGQV-GIAQIIFNMMTERDVVCWNSMISGLAIH 497



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 202/476 (42%), Gaps = 81/476 (17%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R H   +  GL  +      L+  Y + GS+  +  +FD    P+   +  ++     + 
Sbjct: 163 RCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSG 222

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSL--GDLGSG------EKVHGRIIKCGF 126
             ++++ L+ +M R    +      SVL AC+    GD          + +H  +++ GF
Sbjct: 223 AVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGF 282

Query: 127 DKDD------------------------------VIQTSILCT-YGEFGCLD-------- 147
           D D                               ++  +IL T YG+ GC +        
Sbjct: 283 DSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDL 342

Query: 148 ---------------------------DARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
                                       AR +FDK++   V +W+++++ Y       + 
Sbjct: 343 MQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDT 402

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +++F  M  + V+PD  T+  +   C  L  L   + +H   ++  +  D  + +  I M
Sbjct: 403 IELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDM 462

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG +  A+  F  + +R    W +MIS        ++A + F +M E    P   + 
Sbjct: 463 YSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSY 522

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIH 357
            +++ SCA L  + +G+ +H Q+++ G    YD   Y+G +LI+ YA+CG M +     +
Sbjct: 523 ASMINSCARLSSIPQGRQIHAQVLKDG----YDQNVYVGSSLIDMYAKCGNMDDARLFFN 578

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +  +NI++WN +I  YA+ G  ++A+EL   M T    PDS +  + L+ C + G
Sbjct: 579 CMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSG 634



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 3/352 (0%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
           +G   +    + ++ S  +   + S+R +FD   +P    W  L+  Y      +++I L
Sbjct: 346 SGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIEL 405

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           + +M  +           +L  CS LG L  G++VH   +K     D  + + ++  Y +
Sbjct: 406 FRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSK 465

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G +  A+ +F+ MT RDVV W+S+I+    ++   E    F  M   G+ P   +  S+
Sbjct: 466 CGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASM 525

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
             +C  L S+   R IH  VL+     +  +G+S I MY+KCG++  A   F  +  +  
Sbjct: 526 INSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNI 585

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +W  MI  Y ++G+ +KA+E F  ML  K++P+ +T I VL  C+  G + E  +    
Sbjct: 586 VAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNS 645

Query: 323 IIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLIS 372
           +    G+ P  ++    LI+     G+ +E   VI  +  + + + W +L++
Sbjct: 646 MESNYGIRPLVEHY-TCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLA 696



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 94/236 (39%), Gaps = 43/236 (18%)

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           R ++Y   A      + GDL  A+ +   M +RN VSW+ +I          +A  +++ 
Sbjct: 73  RPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRG 132

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGK---------------FYFN----------- 624
           ML  G+ P   T  ++L AC    ++++G+               F  N           
Sbjct: 133 MLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGS 192

Query: 625 ---AMRIFG--VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP-------ANGSIWGA 672
              A+R+F     P+   +  M+  L++SG ++ A ++   M          A  S+ GA
Sbjct: 193 VADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGA 252

Query: 673 LLNGC----RIHKRIDVMKTIEKELSVTG-TNDNGYYTLLSNIYAEEGNWDEFGKV 723
               C     + + I + ++I   +   G  +D      L ++YA+    DE  KV
Sbjct: 253 CAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKV 308


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/671 (33%), Positives = 358/671 (53%), Gaps = 5/671 (0%)

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N   EE++ L + M   +  +   ++ +++R C        G KV+   +         +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REG 191
             + L  +  FG L DA  VF KM+ R++ SW+ ++  Y       E + ++H M+   G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V+PD  T   +   CG +  L   R +H HV+R   ++D  + N+ I MY KCGD+ SA 
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F ++ +R   SW AMIS Y  +G   + L+ F  M  +  +P+L+TL +V+ +C  LG
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
             R G+ +H  +I  G   +      +L + Y   G   E EK+   +  ++I+SW  +I
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCN-SLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMI 370

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S Y    + ++A++    M    + PD  +VA+ LSAC  +G L  G+++H   IK    
Sbjct: 371 SGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 432 DE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
               V ++LI+MYSKC   + A  +F  I +K+V+ W S+I G   N    EA+  F QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM 490

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            +  L+ + +T   A+ AC+ IG L  GK +H  ++  GV  D ++  AL DMY +CG +
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A   F+S  +++V SW+ ++  Y   GQ +    LF +M+ + ++P+E+TF+++L  C
Sbjct: 550 NIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGC 608

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
             S  V +G  YF+ M  +GV P+L+HYAC+VDLL R+G+++ A K I  MP   + ++W
Sbjct: 609 GKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           GALLN CRIH  ID+ +   + +        GYY LL N+YA+ G W E  KVR +M+  
Sbjct: 669 GALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728

Query: 731 GLKKVPGYSTI 741
           GL    G S +
Sbjct: 729 GLTVDAGCSWV 739



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 288/547 (52%), Gaps = 6/547 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FI 97
           +   G+L  +  VF    E + F W VL+  Y    +F+E+I LYH+M+       + + 
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYT 198

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +P VLR C  + DL  G +VH  +++ G++ D  +  +++  Y + G +  AR +FD+M 
Sbjct: 199 FPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RD++SW+++I+ YF+N    EGLK+F +M    V+PD +T+ S+  AC  L   R  R 
Sbjct: 259 RRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH +V+     +D  + NS   MY   G    AE+ F +++ +   SWT MIS Y  +  
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFL 378

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +KA++++  M +   +P+ IT+  VL +CA LG L  G  +H   I+  +   Y  +  
Sbjct: 379 PEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL-ISYVIVAN 437

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            LI  Y++C  + +   + H I  +N++SW  +I+         EAL    QM+   L P
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM-TLQP 496

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           ++ ++ ++L+AC  +G+L  G +IH HV++     D+F+ ++L+DMY +CG  N+A+  F
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQF 556

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
              Q+K V  WN ++ G+ + G     + LF +M    +  DE+TF++ +  C     + 
Sbjct: 557 NS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVR 615

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCY 575
           +G     K+  YGV  ++     + D+  + G+LQ A +    M    +   W A+++  
Sbjct: 616 QGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675

Query: 576 GMHGQLN 582
            +H  ++
Sbjct: 676 RIHHNID 682



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 207/420 (49%), Gaps = 6/420 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  +  L R   +H H++  G   D      LI  Y + G ++S+RL+FD     D
Sbjct: 202 VLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N    E + L+  M             SV+ AC  LGD   G  +H 
Sbjct: 262 IISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I  GF  D  +  S+   Y   G   +A K+F +M  +D+VSW+++I+ Y  N    +
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEK 381

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  +  M ++ V+PD +T+ ++  AC  L  L     +H   ++ ++     + N+ I 
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKC  +  A   F  I ++   SWT++I+    +    +AL  F + +++  +PN IT
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFFRQMKMTLQPNAIT 500

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L   L +CA +G L  GK +H  ++R G+G + D+L  AL++ Y  CG+M+      ++ 
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLD-DFLPNALLDMYVRCGRMNIAWNQFNS- 558

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++++ SWN+L++ Y+ +G     +EL  +M    + PD  +  S L  CG    ++ GL
Sbjct: 559 QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGL 618



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 4/350 (1%)

Query: 11  RKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           R+L R +HA+++ TG   D      L + Y   GS R +  +F      D   W  +I  
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISG 372

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y +N   E++I  Y  M ++          +VL AC++LGDL +G ++H   IK      
Sbjct: 373 YEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
            ++  +++  Y +  C+D A  +F  +  ++V+SW+SIIA    N    E L  F  M +
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM-K 491

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             ++P+ +T+ +   AC  + +L   + IH HVLR  + +D  L N+ + MY +CG +  
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNI 551

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F   +K+  +SW  +++ Y+  G     +E F +M++ +  P+ IT I++L  C  
Sbjct: 552 AWNQF-NSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGK 610

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +R+G     ++   G+ P   +    +++     G++ E  K I  +
Sbjct: 611 SQMVRQGLMYFSKMEEYGVTPNLKHYA-CVVDLLGRAGELQEAHKFIQKM 659



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 2/205 (0%)

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G   NG   EA+ L + M    + +DE  F+  ++ C      E+G  V+   +S     
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            + +  A   M+ + G+L  A  VF  MSERN+ SW+ ++  Y   G  ++A  L+ +ML
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187

Query: 593 -DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
              G+KP+  TF  +L  C     +  G+     +  +G E D+     ++ +  + GD+
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 652 EGAFKMIHSMPFPANGSIWGALLNG 676
           + A  +   MP     S W A+++G
Sbjct: 248 KSARLLFDRMPRRDIIS-WNAMISG 271


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/687 (33%), Positives = 379/687 (55%), Gaps = 33/687 (4%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK--DDVIQTSILCTYGEF 143
           MI    +  NF +P+VL+A + + +L  G+++H  + K G+       I  +++  YG+ 
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L DA KVFD++T RD VSW+SII++     +    +K F  M+ EG EP   T++S+A
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 204 EACGELCS---LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
            AC  L     L   + IHG   R K        N+ + MY+K G L  A+   V  E R
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFR-KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
              +W +MIS ++++  F +AL     M+    +P+ +T  +VL +C+ L  LR GK +H
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
              +R     E  ++G AL++ Y  CG++     V  ++ +R I  WN +I+ YA+    
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299

Query: 381 KEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSS 438
           ++AL L ++M+   GL  ++ +++S + A      +     IHG+VIK   + + ++Q++
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNA 359

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM-------- 490
           LIDMYS+ G    +  +F+ ++ + +V WN++I  +   G S +A+ L H+M        
Sbjct: 360 LIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419

Query: 491 ----YLN----CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
               Y +      + + +T +T +  C+++  L KGK +H   I   +   + + +AL D
Sbjct: 420 YDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVD 479

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-----IK 597
           MYAKCG L  A+RVFD M  RNV++W+ +I  YGMHG+  ++  LF+ M+  G     +K
Sbjct: 480 MYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVK 539

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           P EVTF+ +  +CSHSG V+EG   F+ M+   G+EP   HYAC+VDL+ R+G +E A+ 
Sbjct: 540 PTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYG 599

Query: 657 MIHSMP--FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           ++++MP  F   G+ W +LL  CRI+  I++ +   + L     +   +Y LLSNIY+  
Sbjct: 600 LVNTMPSGFDKVGA-WSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSA 658

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G WD+   +R  M+  G+KK PG S I
Sbjct: 659 GLWDKAMNLRRRMKAMGVKKEPGCSWI 685



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 290/595 (48%), Gaps = 44/595 (7%)

Query: 15  RLHAHLLVTGLHYDPPAS----TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           ++HAH+   G  Y   +S      L+  Y + G L  +  VFD   E D   W  +I   
Sbjct: 31  QIHAHVFKFG--YGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISAL 88

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSL---GDLGSGEKVHGRIIKCGFD 127
                +E +I  +  M+ E    S+F   S+  ACS+L     L  G+++HG    C F 
Sbjct: 89  CRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHG----CCFR 144

Query: 128 KD---DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           K         +++  Y + G LDDA+ +      RD+V+W+S+I+S+  N    E L   
Sbjct: 145 KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFL 204

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSK 243
             MV EGV+PD VT  S+  AC  L  LR  + IH + LR    I+   +G++ + MY  
Sbjct: 205 RLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCN 264

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLIT 302
           CG + S    F  +  R    W AMI+ Y +S   +KAL  F++M        N  T+ +
Sbjct: 265 CGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSS 324

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           ++ +      +   + +H  +I++G+     YL  ALI+ Y+  G +   +++  ++ +R
Sbjct: 325 IVPAYVRCEGISRKEGIHGYVIKRGLETNR-YLQNALIDMYSRMGDIKTSKRIFDSMEDR 383

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQ----------------TWGLMPDSFSVASSL 406
           +I+SWN +I+ Y   G S +AL LL +MQ                     P+S ++ + L
Sbjct: 384 DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVL 443

Query: 407 SACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
             C ++ +L  G +IH + I+ +      V S+L+DMY+KCG  NLA  +F+++  ++V+
Sbjct: 444 PGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVI 503

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNC-----LEMDEVTFLTAIQACSNIGQLEKGKW 520
            WN +I  +  +G   E++ LF  M         ++  EVTF+    +CS+ G +++G  
Sbjct: 504 TWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLS 563

Query: 521 VHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMI 572
           + HK+ + +G+         + D+  + G ++ A  + ++M      V +WS+++
Sbjct: 564 LFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLL 618



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 266/576 (46%), Gaps = 74/576 (12%)

Query: 6   SCTNLRKL------TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +C+NLRK        ++H      G H+   ++  L+  YA++G L  ++ +   F++ D
Sbjct: 122 ACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRD 180

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  N  F E+++    M+ E        + SVL ACS L  L +G+++H 
Sbjct: 181 LVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHA 240

Query: 120 RIIKCGFDKDDVIQTSILCT-----YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             ++     DDVI+ S + +     Y   G ++  R VFD +  R +  W+++IA Y  +
Sbjct: 241 YALR----TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQS 296

Query: 175 ADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
               + L +F  M    G+  +  TM S+  A      +     IHG+V++R ++ +  L
Sbjct: 297 EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYL 356

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N+ I MYS+ GD+ +++R F  +E R   SW  +I+ Y   G    AL    +M  ++E
Sbjct: 357 QNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEE 416

Query: 294 ----------------EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
                           +PN ITL+TVL  CA L  L +GK +H   IR  +  +   +G 
Sbjct: 417 KSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVT-VGS 475

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG--- 394
           AL++ YA+CG ++   +V   +  RN+++WN++I  Y   G  KE+LEL   M   G   
Sbjct: 476 ALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKG 535

Query: 395 --LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ---SSLIDMYSKCGFK 449
             + P   +  +  ++C + G +  GL +  H +K +   E      + ++D+  + G  
Sbjct: 536 GEVKPTEVTFIALFASCSHSGMVDEGLSLF-HKMKNEHGIEPAPDHYACIVDLVGRAGKV 594

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNG---NSLEAINLFHQMYLNCLEMDEVTFLTAI 506
             AY L            N+M  GF + G   + L A  ++H      +E+ E+      
Sbjct: 595 EEAYGLV-----------NTMPSGFDKVGAWSSLLGACRIYHN-----IEIGEI------ 632

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            A  N+ QL+     H+ L+S     +IY    L D
Sbjct: 633 -AAENLLQLQPDVASHYVLLS-----NIYSSAGLWD 662



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 186/425 (43%), Gaps = 78/425 (18%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +  C  + +   +H +++  GL  +      LI+ Y+ MG +++S+ +FD+ ++ D 
Sbjct: 326 VPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDI 385

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKM--IREQATI--------------SNFIYPSVLRA 104
             W  +I  Y+      +++LL H+M  I E++T               ++    +VL  
Sbjct: 386 VSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPG 445

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           C+SL  L  G+++H   I+        + ++++  Y + GCL+ AR+VFD+M  R+V++W
Sbjct: 446 CASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITW 505

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREG-----VEPDFVTMLSLAEACGE-------LCSL 212
           + II +Y  +    E L++F  MV EG     V+P  VT ++L  +C         L   
Sbjct: 506 NVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLF 565

Query: 213 RPARSIHG------------HVLRRKIKIDGPLG--NSFIVMYSKCG---DLLSAERTFV 255
              ++ HG             ++ R  K++   G  N+    + K G    LL A R + 
Sbjct: 566 HKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYH 625

Query: 256 KIE-------------KRCTTSWTAMISCYNRSGWFQKA--LESFVKMLEVKEEPNLITL 300
            IE                 + +  + + Y+ +G + KA  L   +K + VK+EP     
Sbjct: 626 NIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEP----- 680

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPE----YDYLGPALIEFYAECGKMSECEKVI 356
                   G  W+  G  VH  +      P+    +D+L   L E   + G + +   V+
Sbjct: 681 --------GCSWIEYGDEVHKFLAGDLSHPQSEKLHDFL-ETLSERLKKEGYVPDTACVL 731

Query: 357 HAIGE 361
           H I E
Sbjct: 732 HDIDE 736


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/727 (28%), Positives = 390/727 (53%), Gaps = 5/727 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+ ++  G   D   S  L+  Y +   +  +R +FD     D   W +L+  Y     
Sbjct: 37  IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE++ L+  M+      + F   + LR+CS+L +   G +    + K GFD + V+ ++
Sbjct: 97  HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSA 156

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + GC  +A +VF+ M + D+VSW+ +++S+ +    S+ L+++H M++ GV P+
Sbjct: 157 LIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPN 216

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T + L  A   L  L   + +H H++  +I+++  L  + + MY KC  +  A +   
Sbjct: 217 EFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSK 275

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
              +     WTA+IS + +S  F++A+ +F +M      PN  T   +L +C+ +  L  
Sbjct: 276 LTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDL 335

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE-CEKVIHAIGERNILSWNMLISEY 374
           GK +H +++  G+  +   +G +L++ Y +C  M E   +    I   N++SW  LI+ +
Sbjct: 336 GKQIHSRVVMAGLENDVS-VGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGF 394

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
           +  G+ +E++++   MQ  G+ P+SF++++ L ACG + SL    ++HG++IK +   D 
Sbjct: 395 SEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDV 454

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++L+D Y+  G  + A+ +   ++ + V+ + S+     Q GN   A+N+   M  +
Sbjct: 455 VVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKD 514

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            + MD  +  + + A + I  +E GK +H   +  G+   I +   L D+Y KCG +  A
Sbjct: 515 DVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDA 574

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
            R F  ++E + VSW+ +I     +G ++ A S F+ M  +G++P+++T + +L+ACSH 
Sbjct: 575 HRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHG 634

Query: 614 GSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V+ G  YF +MR   G+ P L HY C+VDLL R+G +E A  +I +MPF  +  I+  
Sbjct: 635 GLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKT 694

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C++H  I + + + ++      +D  +Y LL+N+Y + G  +   K R +M   G+
Sbjct: 695 LLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGV 754

Query: 733 KKVPGYS 739
           +K PG S
Sbjct: 755 RKNPGQS 761



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 170/639 (26%), Positives = 313/639 (48%), Gaps = 12/639 (1%)

Query: 4   FRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            RSC+ LR+    TR  A +  +G   +P   + LI+ Y++ G  + +  VF+     D 
Sbjct: 123 LRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDI 182

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W +++  ++    + +++ LYH+MI+     + F +  +L A S LG L  G+ VH  
Sbjct: 183 VSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAH 241

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++    + + V++T+++  Y +   ++DA KV       DV  W++II+ +  +    E 
Sbjct: 242 LMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREA 301

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +  FH M   GV P+  T   +  AC  + +L   + IH  V+   ++ D  +GNS + M
Sbjct: 302 ITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDM 361

Query: 241 YSKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           Y KC +++  A R F  I      SWT++I+ ++  G  +++++ F  M  V   PN  T
Sbjct: 362 YMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFT 421

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L T+LG+C  +  L + + +H  II+     +   +G AL++ YA  G + +   V   +
Sbjct: 422 LSTILGACGTIKSLTQTRKLHGYIIKNNADNDV-VVGNALVDAYAGLGMVDDAWHVTSMM 480

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+++++  L +   + G  + AL ++  M    +  D FS+AS LSA   +  ++ G 
Sbjct: 481 KHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGK 540

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H + +K        V + L+D+Y KCG  + A+  F  I +   V WN +I G   NG
Sbjct: 541 QLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNG 600

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
           +   A++ F  M L  +E D++T L  + ACS+ G ++ G  +       +G+R  +   
Sbjct: 601 HVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHY 660

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             L D+  + G L+ A  V ++M  + + + +  ++    +HG +     + +Q L+  +
Sbjct: 661 VCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLE--L 718

Query: 597 KPNEVTFMNILWAC-SHSGSVEEGKFYFNAMRIFGVEPD 634
            P++  F  +L      SG  E G+     MR  GV  +
Sbjct: 719 DPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKN 757



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 213/412 (51%), Gaps = 4/412 (0%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           S+R    IH  +++   + D  L N+ + +Y KC  +  A + F ++  R   SWT ++S
Sbjct: 30  SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMS 89

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y + G  ++ALE F  ML   E PN  TL T L SC+ L     G      + + G   
Sbjct: 90  AYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDS 149

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               LG ALI+FY++CG   E  +V   +   +I+SW M++S +   G   +AL+L  +M
Sbjct: 150 N-PVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRM 208

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKCGFK 449
              G+ P+ F+    L+A   +G L  G  +H H++    +   V +++L+DMY KC   
Sbjct: 209 IQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSI 267

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A  + +   +  V +W ++I GF Q+    EAI  FH+M  + +  +  T+   + AC
Sbjct: 268 EDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNAC 327

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL-QTAQRVFDSMSERNVVSW 568
           S+I  L+ GK +H +++  G+  D+ +  +L DMY KC ++ + A R F  ++  NV+SW
Sbjct: 328 SSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISW 387

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           +++I  +  HG   ++  +F  M   G++PN  T   IL AC    S+ + +
Sbjct: 388 TSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTR 439



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 3/171 (1%)

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           E + L  I +  N   +  G  +H  +I  G ++D+++   L  +Y KC  +  A+++FD
Sbjct: 15  EYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFD 74

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M  R+V SW+ ++  YG  G   +A  LF  ML SG  PNE T    L +CS       
Sbjct: 75  EMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNH 134

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           G  +   +   G + +    + ++D  S+ G  + A+++   M    NG I
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM---NNGDI 182


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/592 (33%), Positives = 347/592 (58%), Gaps = 4/592 (0%)

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD++     + W+ ++     + D S  + +F  M+  GVE D  T   ++++   L S+
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                +HG +L+        +GNS +  Y K   + SA + F ++ +R   SW ++I+ Y
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
             +G  +K L  FV+ML    E +L T+++V   CA    +  G++VH   ++     E 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE- 179

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
           D     L++ Y++CG +   + V   + +R+++S+  +I+ YAR+G++ EA++L  +M+ 
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL 451
            G+ PD ++V + L+ C     L  G ++H  + + D   D FV ++L+DMY+KCG    
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACS 510
           A L+F  ++ K ++ WN++I G+ +N  + EA++LF+ +        DE T    + AC+
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           ++   +KG+ +H  ++  G   D ++  +L DMYAKCG L  A  +FD ++ +++VSW+ 
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 419

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IF 629
           MI  YGMHG   +A +LF QM  +GI+ +E++F+++L+ACSHSG V+EG  +FN MR   
Sbjct: 420 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 479

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            +EP ++HYAC+VD+L+R+GD+  A++ I +MP P + +IWGALL GCRIH  + + + +
Sbjct: 480 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 539

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +++      + GYY L++NIYAE   W++  ++R  +   GL+K PG S I
Sbjct: 540 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 591



 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 175/526 (33%), Positives = 291/526 (55%), Gaps = 7/526 (1%)

Query: 52  FDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL 111
           FD  K   +  W +L+     +  F  SI L+ KM+     + ++ +  V ++ SSL  +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             GE++HG I+K GF + + +  S++  Y +   +D ARKVFD+MT RDV+SW+SII  Y
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
             N    +GL +F  M+  G+E D  T++S+   C +   +   R++H   ++     + 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
              N+ + MYSKCGDL SA+  F ++  R   S+T+MI+ Y R G   +A++ F +M E 
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P++ T+  VL  CA    L EGK VH  I    +G +  ++  AL++ YA+CG M E
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI-FVSNALMDMYAKCGSMQE 299

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELL-VQMQTWGLMPDSFSVASSLSACG 410
            E V   +  ++I+SWN +I  Y++   + EAL L  + ++     PD  +VA  L AC 
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359

Query: 411 NVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           ++ +   G +IHG++++     D  V +SL+DMY+KCG   LA++LF+ I  K +V W  
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 419

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           MI G+  +G   EAI LF+QM    +E DE++F++ + ACS+ G +++G W    ++ + 
Sbjct: 420 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG-WRFFNIMRHE 478

Query: 530 VRKDIYID--TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
            + +  ++    + DM A+ GDL  A R  ++M    +   W A++
Sbjct: 479 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 524



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 230/475 (48%), Gaps = 7/475 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F S  ++    +LH  +L +G          L+  Y +   + S+R VFD   E D   W
Sbjct: 54  FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 113

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y+ N   E+ + ++ +M+     I      SV   C+    +  G  VH   +K
Sbjct: 114 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 173

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F ++D    ++L  Y + G LD A+ VF +M+ R VVS++S+IA Y       E +K+
Sbjct: 174 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 233

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M  EG+ PD  T+ ++   C     L   + +H  +    +  D  + N+ + MY+K
Sbjct: 234 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK 293

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLIT 302
           CG +  AE  F ++  +   SW  +I  Y+++ +  +AL  F  +LE K   P+  T+  
Sbjct: 294 CGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 353

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL +CA L    +G+ +H  I+R G   +  ++  +L++ YA+CG +     +   I  +
Sbjct: 354 VLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASK 412

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++SW ++I+ Y   G  KEA+ L  QM+  G+  D  S  S L AC + G +  G +  
Sbjct: 413 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 472

Query: 423 GHVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
            ++++ +CK E      + ++DM ++ G    AY   E +       +W +++CG
Sbjct: 473 -NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 526



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S +   K   +H +++  G   D   +  L++ YA+ G+L  + ++FD     D 
Sbjct: 355 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 414

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + F +E+I L+++M +         + S+L ACS  G +  G
Sbjct: 415 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 468


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/654 (34%), Positives = 355/654 (54%), Gaps = 20/654 (3%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIK--CGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMT 157
           +LR   S G L S   +H R++    G     +  +T +L  Y   G L  AR VFD   
Sbjct: 32  LLRLLPSCGTLPSLRVLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTP 91

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP----DFVTMLSLAEACGELCSLR 213
             D  S+  ++         +E + +   M R    P    DFV  L+L +AC     +R
Sbjct: 92  RPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLAL-KAC-----IR 145

Query: 214 PARSIHGHVLR-RKIKIDGPLG---NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
            A   +G  L    +K+ G  G   NS + MY+K GDL  A + F +I  R   SWT+M+
Sbjct: 146 SADYGYGTRLHCDAVKVGGADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSML 205

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           S   ++G+    L  F KM +    P+  T+ TV+ +C+ L  L +G+ +H  +I++G+ 
Sbjct: 206 SGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLM 265

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
               ++  AL++ Y +CG++ + + V   +   +++ W  +I  Y + G   +AL L + 
Sbjct: 266 SN-SFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLD 324

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGF 448
            +   ++P+S ++A+ LSA   +  L LG  IHG  +K+   +   V ++L+DMY+KC  
Sbjct: 325 KKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQA 384

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + A  +F  I  K VV WNSM+ G+ +N    +A+ LF QM L     D ++ + A+ A
Sbjct: 385 VSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSA 444

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
              +G L  GK  H   + +    +IY+ TAL ++Y KCGDL +A+RVFD M++RN V+W
Sbjct: 445 SVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTW 504

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-R 627
            AMI  YGM G    +  LF +ML  G+ PN+V F +IL  CSH+G V   K YF++M +
Sbjct: 505 CAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQ 564

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            F + P ++HYACMVD+L+R+G++E A + I +MP  A+ S+WGA L+GC +H R+   +
Sbjct: 565 HFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGE 624

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              K + V        Y L+SN+Y   G W++   +R  M+  GL K+PGYS+I
Sbjct: 625 EAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 177/599 (29%), Positives = 310/599 (51%), Gaps = 11/599 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLV--TGLHYDP-PASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  SC  L  L  LHA LL    GL      A T+L+  YA +G L S+R+VFD    PD
Sbjct: 35  LLPSCGTLPSLRVLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPD 94

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQA---TISNFIYPSVLRACSSLGDLGSGEK 116
           ++ + V++ C +      E++ L+  M R +       +F+    L+AC    D G G +
Sbjct: 95  AYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGYGTR 154

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H   +K G   D  +  S++  Y + G L+ ARKVF+++  R+VVSW+S+++    N  
Sbjct: 155 LHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGF 213

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            ++GL +F+ M ++ V P   T+ ++  AC  L  L   R +HG V+++ +  +  +  +
Sbjct: 214 AADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAA 273

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY KCG+L  A+  F ++       WT MI  Y ++G    AL  F+        PN
Sbjct: 274 LLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPN 333

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T+ TVL + A L  L  G+S+H   ++ G+  EY  +  AL++ YA+C  +SE  ++ 
Sbjct: 334 SVTIATVLSASAQLRDLSLGRSIHGIAVKLGL-VEYTVVVNALVDMYAKCQAVSEANRIF 392

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
            +I  +++++WN ++S YA   M  +AL L  QM   G  PD+ SV  +LSA   +G L 
Sbjct: 393 GSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLL 452

Query: 417 LGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           +G   HG+ +K     + +V ++L+++Y+KCG    A  +F+ +  ++ V W +MI G+ 
Sbjct: 453 IGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYG 512

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
             G+S  +I+LF +M  + +  ++V F + +  CS+ G +   K     +   + +   +
Sbjct: 513 MQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSM 572

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
                + D+ A+ G+L+ A    D+M  + +   W A +    +H +L       K+M+
Sbjct: 573 KHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMM 631


>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
 gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
          Length = 805

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/748 (31%), Positives = 394/748 (52%), Gaps = 13/748 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF++CT++R L +LHA +L  GL  D    + ++  YA +G L  +RL F  F   D   
Sbjct: 52  LFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGFLNDDLAQ 111

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I       + EE+ILLY  +   Q  +        L++C+ L +L  G+ +H   +
Sbjct: 112 WNSVIVDIFRAGYPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTELRNLLLGKGMHADSL 171

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS--EG 180
           K G ++D  + +S++  Y +   + D++K F+++  +D+VS++S+I  Y +N D +    
Sbjct: 172 KLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITGYSENMDSTSWNA 231

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIV 239
            ++   M +  +E + VT++SL +  G L ++R  +S+H +  RR I + D  LG S + 
Sbjct: 232 FEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRRGIGVSDEVLGTSLVH 291

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
           MY +CG    A  +   + +    SW AM++   R+G    A+  F  ML E K  P+ +
Sbjct: 292 MYMQCGAYQLASASLKNLVQS-VASWNAMLAGLVRTGQSGNAIHHFSVMLHEHKVVPDSV 350

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T   ++ +CA L       SVH  +IR+ + P    L  ALIE Y +C ++   + +   
Sbjct: 351 TYANLISACAELCNSGYAASVHAYLIRRSI-PLDVVLATALIEVYMKCTRIMSSKHLFDQ 409

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++++S+N +I  Y + GM  EA+ LL +M    + P+  ++ S L+A  +      G
Sbjct: 410 LVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAAIADHKDFVRG 469

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY-- 475
             IHG  I+        + + +I MYS CG    A  +F  +++K+++ W  M+ G    
Sbjct: 470 RWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMGCLFC 529

Query: 476 -QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
              G ++E   L  Q + N  + D VT +TAIQA S +G L+  K +H  +    + KD 
Sbjct: 530 GHGGETVELFQLLMQQHGN--KPDSVTVMTAIQAVSELGHLKGVKQIHCFVYRALLEKDT 587

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
               +L   YAKCG L  +  +F S+  R++ SW++MI  YGMHG       +FK M + 
Sbjct: 588 KTINSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEG 647

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
            I P+ +TF ++L ACSH+G ++EG   F +M  I+ V P  +HY C+VDLLSR+G +E 
Sbjct: 648 NINPDGLTFSSVLSACSHAGLIKEGLHIFQSMTSIYSVLPQEEHYGCIVDLLSRAGHLEE 707

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
            +K+I         S+  ALL+ CR +    + + I  EL   G  + G Y L+S ++A+
Sbjct: 708 GYKLIKLSTLNDKSSVLCALLSACRTYGNTMLGQVISNELLELGQQNPGTYALISEVFAQ 767

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +G W++   +R+  +  G +K+PG S I
Sbjct: 768 KGQWNKSANIRNRAKENGSRKLPGSSLI 795


>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
          Length = 916

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/734 (32%), Positives = 385/734 (52%), Gaps = 12/734 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H   L   L  D      L++ YA+ G   SS +VF      D+  W  ++   ++N  
Sbjct: 186 FHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGL 245

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-GEKVHGRIIKCGF-DKDDVIQ 133
            E S   + +M+R            VL ACS L DL S GE VH  +IK G+ D    ++
Sbjct: 246 AEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVE 305

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            S++  Y E G  + A +VF   +++++V+W+++I    +N  V+E + MF  M R   +
Sbjct: 306 NSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM-RSKNQ 364

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAER 252
           PD  T++++  ACG+   L   + +HG+++++  I  +  +GNS + +Y KC D  +A  
Sbjct: 365 PDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARI 424

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWF-QKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
            F  +  R   SW  MIS Y+R+    ++A   F  +L       L T++ V+ SC    
Sbjct: 425 LFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQ 484

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNML 370
            L  GKSVH  I++ G          +LI  Y  CG       ++ +I    +I+SWN  
Sbjct: 485 DLNFGKSVHSFILKYGFLTGVS-AANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTA 543

Query: 371 ISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           I    + G+  +ALE    M  T  L PDS ++ S LS CGN+    LG  IH   +K  
Sbjct: 544 IVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRL 603

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            +    V+++L+ MY + G    A L+F  +  +++  WN MI GF QN   L A+  + 
Sbjct: 604 IEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYK 663

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M     E +E++ +  I AC+ +G L +GK +H  ++ +G++ +++I  +L DMY+KCG
Sbjct: 664 KM--EYFEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCG 721

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  + RVF+S +E+++  W++MI  +G HG    +  +F +M +SG+K    TF+ +L 
Sbjct: 722 RLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLS 781

Query: 609 ACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSHSG  +EG K+Y   +  FG+ P  +H+ C+VD+L R+G ++ A K + S+P     
Sbjct: 782 ACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAH 841

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            +WGALL+ C     + + +++ K L      ++GYY  +SN+YA +  W    +VR I+
Sbjct: 842 GVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDIL 901

Query: 728 EVTGLKKVPGYSTI 741
           +  GL K  G S I
Sbjct: 902 QDKGLMKPRGRSII 915



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 180/675 (26%), Positives = 315/675 (46%), Gaps = 18/675 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   L +    DPP  T +I +Y+ +  + S+  VFD    PD  +W   I     N  
Sbjct: 85  LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           + ++++L+  M+       +     +L   S    L  G   HG  +K   D D  +  +
Sbjct: 145 YGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNT 204

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G    +  VF +M  RD  SW+S+++    N         F  MVR   + D
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264

Query: 196 FVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIK-IDGPLGNSFIVMYSKCGDLLSAERT 253
            V++  +  AC  L  L     S+H  V++   +     + NS I  Y + G   +AE  
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEV 324

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F+    +   +W AMI     +    +A+  F +M   K +P++ TL+T++ +C   G L
Sbjct: 325 FLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGDRGLL 383

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            EGK VH  II+KG   E   +G +L++ Y +C   S    +   +  R+++SWN +IS 
Sbjct: 384 PEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISG 443

Query: 374 YARK-GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CK 431
           Y+R   + +EA  +   + + GL     +V + + +C     L  G  +H  ++K     
Sbjct: 444 YSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLT 503

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQN---GNSLEAINLF 487
                +SLI MY  CG    A+ L E I   S ++ WN+ I G  QN   G++LEA    
Sbjct: 504 GVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFM 563

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
           H      L  D +T ++ +  C N+     GK +H   +   +  ++ +  AL  MY + 
Sbjct: 564 HSTL--TLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRF 621

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           GD ++A+ +F S+  RN+ SW+ MI  +  + +   A   +K+M     +PNE++ + I+
Sbjct: 622 GDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKM--EYFEPNEISIVGII 679

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+  G + +GK     +  FG++ ++   A +VD+ S+ G ++ + ++  S    A  
Sbjct: 680 CACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFES---SAEK 736

Query: 668 SI--WGALLNGCRIH 680
           SI  W ++++    H
Sbjct: 737 SIACWNSMISAFGFH 751



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 7/466 (1%)

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           ++H   L+    +D P+  S I  YS+  D+ SA + F +        W A IS    + 
Sbjct: 84  ALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNC 143

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            +  A+  F  M++V    +  +++ +L   +    L  G + H   +++ +  +   L 
Sbjct: 144 RYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLS-LW 202

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
             L++ YA+CG     E V   +  R+  SWN ++S     G+++ +     +M      
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 397 PDSFSVASSLSACGNVGSL-QLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAY 453
            D  S++  LSAC ++  L   G  +H  VIK+  +D    V++SLI  Y + GF   A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAE 322

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F     K++V WN+MI G  +N    EA+ +F +M     + D  T +T I AC + G
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRG 381

Query: 514 QLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
            L +GK VH  +I  G + ++  +  +L D+Y KC D  TA+ +F +M  R+++SW+ MI
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441

Query: 573 DCYGMHGQL-NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
             Y  +  L  +A ++FK +L  G+     T + ++ +C     +  GK   + +  +G 
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGF 501

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
              +     ++ +    GD   AF ++ S+   ++   W   + GC
Sbjct: 502 LTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGC 547



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 6   SCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +CT   +LR+   +H H++  GL  +   S  L++ Y++ G L  S  VF++  E     
Sbjct: 681 ACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIAC 740

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           W  +I  + ++    +SI ++ KM     +AT S FI  ++L ACS  G    G K +  
Sbjct: 741 WNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFI--ALLSACSHSGLTDEGLKYYHL 798

Query: 121 IIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYFDNADVS 178
           +I+  G          ++   G  G L +A K  + + S+     W +++++    ++  
Sbjct: 799 MIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSE-- 856

Query: 179 EGLKMFHSMVRE--GVEPD----FVTMLSL 202
             LKM  S+ +    +EP+    +VTM +L
Sbjct: 857 --LKMCESVAKHLLCLEPENSGYYVTMSNL 884


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/633 (33%), Positives = 351/633 (55%), Gaps = 10/633 (1%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
            +++H  ++  G  + + I   ++  Y   G +  +R  FD++  +DV +W+S+I++Y  
Sbjct: 92  AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151

Query: 174 NADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           N    E +  F+ ++     + DF T   + +AC  L      R IH  V +   + D  
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVF 208

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +  S I MYS+ G +  A   F  +  R   SW AMIS   ++G   +AL+   +M    
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
              + +T+ ++L  CA LG +     +H  +I+ G+  E  ++  ALI  YA+ G + + 
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL-FVSNALINMYAKFGNLGDA 327

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
           +KV   +  R+++SWN +I+ Y +      A     +MQ  GL PD  ++ S  S     
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387

Query: 413 GSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
              +    +HG +++     E   + ++++DMY+K G  + A+ +F  I  K VV WN++
Sbjct: 388 RDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTL 447

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLE--MDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           I G+ QNG + EAI ++ +M   C E  +++ T+++ + A +++G L++G  +H  LI  
Sbjct: 448 ISGYTQNGLASEAIEVY-RMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT 506

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            +  D+++ T L D+Y KCG L  A  +F  +   + V W+A+I C+G+HG    A  LF
Sbjct: 507 NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLF 566

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
           ++M D G+KP+ VTF+++L ACSHSG V+EGK++F+ M+ +G++P L+HY CMVDLL R+
Sbjct: 567 REMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRA 626

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G +E A+  I  MP   + SIWGALL  CRIH  I++ K     L    + + GYY LLS
Sbjct: 627 GFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLS 686

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           NIYA  G W+   KVRS+    GLKK PG+S+I
Sbjct: 687 NIYANVGKWEGVDKVRSLARERGLKKTPGWSSI 719



 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 201/659 (30%), Positives = 342/659 (51%), Gaps = 43/659 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF SCT      RLHA L+V+G       S RL+  YA +G +  SR  FD  +  D + 
Sbjct: 82  LFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYT 141

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I  Y+ N  F E+I  +++++      ++F  +P VL+AC +L D   G K+H  +
Sbjct: 142 WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWV 198

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            K GF  D  +  S++  Y  FG +  AR +FD M  RD+ SW+++I+    N + ++ L
Sbjct: 199 FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 258

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +   M  EG+  D VT+ S+   C +L  +  A  IH +V++  ++ +  + N+ I MY
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMY 318

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +K G+L  A++ F ++  R   SW ++I+ Y ++     A   F KM     EP+L+TL+
Sbjct: 319 AKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLV 378

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++    A     +  +SVH  I+R+G   E   +G A+++ YA+ G +    KV + I  
Sbjct: 379 SLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPV 438

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           ++++SWN LIS Y + G++ EA+E+   M+    +  +  +  S L+A  +VG+LQ G++
Sbjct: 439 KDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMR 498

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IHGH+IK +   D FV + LID+Y KCG    A  LF ++ ++S V WN++I     +G+
Sbjct: 499 IHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGH 558

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             +A+ LF +M    ++ D VTF++ + ACS+ G +++GKW  H +  YG++  +     
Sbjct: 559 GEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLK---- 614

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
                                       +  M+D  G  G L  A    K M    + P+
Sbjct: 615 ---------------------------HYGCMVDLLGRAGFLEMAYDFIKDM---PLHPD 644

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAFKM 657
              +  +L AC   G++E GKF  +  R+F V+ + + +Y  + ++ +  G  EG  K+
Sbjct: 645 ASIWGALLGACRIHGNIELGKFASD--RLFEVDSENVGYYVLLSNIYANVGKWEGVDKV 701



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 250/487 (51%), Gaps = 15/487 (3%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C  L    ++H  +   G  +D   +  LI  Y+  G +  +R +FD     D  
Sbjct: 180 PVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMG 239

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I   + N    +++ +  +M  E   + +    S+L  C+ LGD+ +   +H  +
Sbjct: 240 SWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYV 299

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK G + +  +  +++  Y +FG L DA+KVF +M  RDVVSW+SIIA+Y  N D     
Sbjct: 300 IKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTAR 359

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVM 240
             F  M   G+EPD +T++SLA    +    + +RS+HG ++RR   ++   +GN+ + M
Sbjct: 360 GFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDM 419

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
           Y+K G + SA + F  I  +   SW  +IS Y ++G   +A+E +  M E +E + N  T
Sbjct: 420 YAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGT 479

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++L + A +G L++G  +H  +I+  +  +  ++G  LI+ Y +CG++ +   + + +
Sbjct: 480 WVSILAAYAHVGALQQGMRIHGHLIKTNLHLDV-FVGTCLIDLYGKCGRLVDAMCLFYQV 538

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG- 418
              + + WN +IS +   G  ++AL+L  +MQ  G+ PD  +  S LSAC + G +  G 
Sbjct: 539 PRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGK 598

Query: 419 -----LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMIC 472
                +Q +G  IK   K       ++D+  + GF  +AY   + +       +W +++ 
Sbjct: 599 WFFHLMQEYG--IKPSLKH---YGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLG 653

Query: 473 GFYQNGN 479
               +GN
Sbjct: 654 ACRIHGN 660



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 205/450 (45%), Gaps = 39/450 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+     ++   T +H +++  GL ++   S  LI  YA+ G+L  ++ VF      D 
Sbjct: 280 LPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDV 339

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  N+    +   + KM             S+    +   D  +   VHG 
Sbjct: 340 VSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGF 399

Query: 121 IIKCGFDKDD-VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           I++ G+  +  VI  +++  Y + G +D A KVF+ +  +DVVSW+++I+ Y  N   SE
Sbjct: 400 IMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASE 459

Query: 180 GLKMFHSM--VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            ++++  M   RE ++ +  T +S+  A   + +L+    IHGH+++  + +D  +G   
Sbjct: 460 AIEVYRMMEECRE-IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCL 518

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I +Y KCG L+ A   F ++ +  +  W A+ISC+   G  +KAL+ F +M +   +P+ 
Sbjct: 519 IDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDH 578

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T I++L +C+  G + EGK     +   G+ P   + G         C           
Sbjct: 579 VTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYG---------C----------- 618

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                       ++    R G  + A + +  M    L PD+    + L AC   G+++L
Sbjct: 619 ------------MVDLLGRAGFLEMAYDFIKDMP---LHPDASIWGALLGACRIHGNIEL 663

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
           G      + ++D ++      L ++Y+  G
Sbjct: 664 GKFASDRLFEVDSENVGYYVLLSNIYANVG 693


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/747 (30%), Positives = 398/747 (53%), Gaps = 16/747 (2%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT   +  +   +H  +    L  D    T L++ Y +MG L ++R VFD     D
Sbjct: 133 VLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKD 192

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLR---ACSSLGDLGSGEK 116
              W  +I     ++   E++ ++ +M  E+    + +  S+L    A S L D+ S + 
Sbjct: 193 VASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSV--SILNLAPAVSRLEDVDSCKS 250

Query: 117 VHGRIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +HG +++ C F    V+  S++  Y + G +  A ++FD+M  +D +SW++++A Y  + 
Sbjct: 251 IHGYVVRRCVFG---VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHG 307

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E L++   M R+ ++ + +++++   A  E   L   + +H + L+  +  D  +  
Sbjct: 308 CYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVAT 367

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MY+KCG+L  A+  F+ +E R    W+A +S   ++G+  +AL  F +M     +P
Sbjct: 368 PIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKP 427

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +   L +++ +CA +   R GK +HC +I+  MG +   +   L+  Y  C        +
Sbjct: 428 DKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDIS-VATTLVSMYTRCKSFMYAMTL 486

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            + +  +++++WN LI+ + + G  + ALE+ +++Q  G+ PDS ++ S LSAC  +  L
Sbjct: 487 FNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDL 546

Query: 416 QLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICG 473
            LG+  HG++IK   + E  V+ +LIDMY+KCG    A  LF   +  K  V WN MI G
Sbjct: 547 YLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAG 606

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           +  NG + EAI+ F+QM L  +  + VTF+T + A S +  L +    H  +I  G    
Sbjct: 607 YLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISS 666

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             I  +L DMYAK G L  +++ F  M  +  +SW+AM+  Y MHGQ   A +LF  M +
Sbjct: 667 TLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQE 726

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
           + +  + V+++++L AC H+G ++EG+  F +M     +EP ++HYACMVDLL  +G  +
Sbjct: 727 THVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFD 786

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
               +I  MP   +  +WGALL  C++H  + + +     L      +  +Y +LS+IYA
Sbjct: 787 EVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYA 846

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + G W +  + RS M   GLKK PGYS
Sbjct: 847 QCGRWIDARRTRSNMTDHGLKKNPGYS 873



 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 212/689 (30%), Positives = 356/689 (51%), Gaps = 32/689 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L RSC  L  L ++HA L+V      P                       ++   P  
Sbjct: 56  LHLLRSCKYLNPLLQIHARLIVQQCTLAP-----------------------NSITNPSL 92

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +W  LI+ Y   + F+E+I  Y  M         + +  VL+AC+   D   G  +H  
Sbjct: 93  ILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQD 152

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I     + D  I T ++  Y + G LD+ARKVFDKM  +DV SW+++I+    +++  E 
Sbjct: 153 IASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEA 212

Query: 181 LKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           L++F  M + EGVEPD V++L+LA A   L  +   +SIHG+V+RR +   G + NS I 
Sbjct: 213 LEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVF--GVVSNSLID 270

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG++  A + F ++  +   SW  M++ Y   G + + L+   +M     + N I+
Sbjct: 271 MYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKIS 330

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++  + +      L +GK VH   ++ GM  +     P ++  YA+CG++ + ++   ++
Sbjct: 331 VVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATP-IVSMYAKCGELKKAKEFFLSL 389

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+++ W+  +S   + G   EAL +  +MQ  GL PD   ++S +SAC  + S +LG 
Sbjct: 390 EGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGK 449

Query: 420 QIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H +VIK D   D  V ++L+ MY++C     A  LF R+  K VV WN++I GF + G
Sbjct: 450 MMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCG 509

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +   A+ +F ++ L+ ++ D  T ++ + AC+ +  L  G   H  +I  G+  ++++  
Sbjct: 510 DPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKV 569

Query: 539 ALTDMYAKCGDLQTAQRVFD-SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           AL DMYAKCG L TA+ +F  +   ++ VSW+ MI  Y  +G  N+A S F QM    ++
Sbjct: 570 ALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVR 629

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           PN VTF+ IL A S+   + E   +   +   G          ++D+ ++SG +  + K 
Sbjct: 630 PNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKC 689

Query: 658 IHSMPFPANGSI-WGALLNGCRIHKRIDV 685
            H M     G+I W A+L+G  +H + +V
Sbjct: 690 FHEM--ENKGTISWNAMLSGYAMHGQGEV 716



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 27/263 (10%)

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           I   S+++WNS+I  + +     EAI  +  M    LE D+ TF   ++AC+      +G
Sbjct: 87  ITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEG 146

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
             +H  + S  +  D++I T L DMY K G L  A++VFD M  ++V SW+AMI      
Sbjct: 147 VAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQS 206

Query: 579 GQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEGKF---YFNAMRIFGVEPD 634
               +A  +F++M ++ G++P+ V+ +N+  A S    V+  K    Y     +FGV  +
Sbjct: 207 SNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVSN 266

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL-----NGC------------ 677
                 ++D+ S+ G+++ A ++   M    + S W  ++     +GC            
Sbjct: 267 -----SLIDMYSKCGEVKLAHQIFDQMWVKDDIS-WATMMAGYVHHGCYFEVLQLLDEMK 320

Query: 678 RIHKRIDVMKTIEKELSVTGTND 700
           R H +++ +  +   L+ T T D
Sbjct: 321 RKHIKMNKISVVNSVLAATETRD 343



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 87/223 (39%), Gaps = 8/223 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P     + LR+    HA ++  G          LI+ YA+ G L  S   F   +   +
Sbjct: 639 LPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGT 698

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  Y  +   E ++ L+  M      + +  Y SVL AC   G +  G  +   
Sbjct: 699 ISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQS 758

Query: 121 II-KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVS 178
           +  K   +        ++   G  G  D+   + DKM T  D   W +++ +   +++V 
Sbjct: 759 MTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVK 818

Query: 179 EGLKMFHSMVREGVEP----DFVTMLSLAEACGELCSLRPARS 217
            G    H +++  +EP     ++ +  +   CG     R  RS
Sbjct: 819 LGEIALHHLLK--LEPRNAVHYIVLSDIYAQCGRWIDARRTRS 859


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/752 (30%), Positives = 384/752 (51%), Gaps = 24/752 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L R+  + R L+   R+HA ++  GL  +      L+  Y +  SL     VF   +  D
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +   + +I ++H+M +E        + +VL+AC+ LGDL  G  +H 
Sbjct: 93  EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I++ G +   V+   +L  YG  GC+  A  +F++M  RD+VSW++ IA+   + D+  
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDM 211

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M  EGV P  +T++     C ++   R AR+IH  V    ++    +  +   
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVSTALAS 268

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            Y++ G L  A+  F +  +R   SW AM+  Y + G   +A   F +ML     P+ +T
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT 328

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+     C+ L   R G+ +H   + KG+  +   LG AL++ Y  CG   E   +   I
Sbjct: 329 LVNASTGCSSL---RFGRMIHACALEKGLDRDI-VLGNALLDMYTRCGSPEEARHLFEGI 384

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN----VGSL 415
              N +SWN +I+  ++KG  K ALEL  +MQ  G+ P   +  + L A  +      ++
Sbjct: 385 -PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443

Query: 416 QLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFER---IQQKSVVMWNSMI 471
             G ++H  ++      E  + ++++ MY+ CG  + A   F+R     +  VV WN++I
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
               Q+G+   A+  F +M L+ +  +++T +  + AC+    L +G  VH  L   G+ 
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGME 563

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            ++++ TAL  MY +CG L++A+ +F+ ++ ER+VV ++AMI  Y  +G   +A  LF +
Sbjct: 564 SNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWR 623

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSG 649
           M   G +P+E +F+++L ACSH G  +EG   F +MR  +G+ P   HYAC VD+L R+G
Sbjct: 624 MQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAG 683

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            +  A ++I  M       +W  LL  CR ++ +D  +     +      D   Y +LSN
Sbjct: 684 WLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSN 743

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           I A  G WDE  +VR+ ME  GL+K  G S I
Sbjct: 744 ILAGAGKWDEAAEVRTEMESRGLRKQAGKSWI 775



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 195/378 (51%), Gaps = 13/378 (3%)

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ +L +      L +G+ +H +I+  G+  E   LG  L+  Y +C  + + E+V   +
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCESLGDVEEVFSRL 88

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+  SW  +I+ Y   G +K A+ +  +MQ  G+  D+ +  + L AC  +G L  G 
Sbjct: 89  EVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGR 148

Query: 420 QIHGHVIKIDCKDEFVQSSLI-DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH  +++   + + V ++L+  +Y  CG    A LLFER++ + +V WN+ I    Q+G
Sbjct: 149 SIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSG 207

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +   A+ LF +M L  +    +T +  +  C+ I Q    + +H  +   G+ + + + T
Sbjct: 208 DLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVST 264

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL   YA+ G L  A+ VFD  +ER+VVSW+AM+  Y  HG +++AA LF +ML  GI P
Sbjct: 265 ALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPP 324

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           ++VT +N    CS   S+  G+         G++ D+     ++D+ +R G  E A  + 
Sbjct: 325 SKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 659 HSMPFPANGSIWGALLNG 676
             +  P N   W  ++ G
Sbjct: 382 EGI--PGNAVSWNTMIAG 397


>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/716 (32%), Positives = 381/716 (53%), Gaps = 12/716 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L++ YA+ G  RS+ +VF +    D+  W  +I   ++N   E S   + +M        
Sbjct: 204 LVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSIFQPD 263

Query: 95  NFIYPSVLRACSSLGDLGS-GEKVHGRIIKCGFDKDDV--IQTSILCTYGEFGCLDDARK 151
                SVL ACS L DL S GE VH   +K G++      +  S++  Y EFG  + A+K
Sbjct: 264 EVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPEAAKK 323

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VF    +R++VSW+++I     N  V+E L +   M  E  +PD  T++++   C +   
Sbjct: 324 VFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN-QPDVATLVTIVSGCADQGL 382

Query: 212 LRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           L    ++HG+V+R+ +  + P +GNS + +Y KC +  +A   F+ + +R   SW  MIS
Sbjct: 383 LSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMIS 442

Query: 271 CYNRSGWFQKALESFVK-MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
            Y+R G  ++  +   K +L      +L T++ V+ SC+    L  GK++H   ++ G  
Sbjct: 443 GYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGFT 502

Query: 330 PEYDYLGPALIEFYAECG-KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
                   ALI  Y  CG  ++    +   I   +I+SWN +I    +  + K+ALE+  
Sbjct: 503 SSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVGCLQNELHKDALEIFR 562

Query: 389 QMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKC 446
            M  +  + PDS ++ S LSACG++  L LG  IH  ++K +   +  V++SL+ MY + 
Sbjct: 563 FMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRF 622

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G    A L+F  +   ++  WN MI GF QN     A+  + +M     E +E++ +  I
Sbjct: 623 GDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKM--EDFEPNEISVVGII 680

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            AC+ +G   +GK +H  +    +  +++I  +L DMY KCG L  A RVF++ +E+++ 
Sbjct: 681 CACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIA 740

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNA 625
            W+++I  +G HG    +  LF +M DSG+K  + TF+ +L ACSHSG V+EG K+Y   
Sbjct: 741 GWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLSACSHSGLVDEGWKYYCLM 800

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
              FG+ P  +H+ C+VD+L R+G ++ A K + S+P      IWGALLN C     + +
Sbjct: 801 SEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQQTHGIWGALLNACSSRSELKM 860

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++I K L      ++GYY   +N+YA +  W    +VRS+++  GL K  G ST+
Sbjct: 861 GESIAKHLLHLEPGNSGYYVTAANLYAYKDMWSGVAQVRSVLQDKGLVKPHGRSTV 916



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 184/696 (26%), Positives = 332/696 (47%), Gaps = 36/696 (5%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT----FKE---PDSFMWAVLIK 68
           LH   L +G   DPP  T L+ +YA  G    +          F+E   PD  +W   + 
Sbjct: 76  LHCAALKSGAVLDPPVRTSLLAAYARAGRGAGAGAGAGAALALFREAVAPDVILWNAAVG 135

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
               +  ++++  L+ +M RE     +     +L   S  G+L  G ++HG   K     
Sbjct: 136 ALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHGMAAKSCLGA 195

Query: 129 DDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
             +    +++  Y + G    A  VF  M  RD  SW+S+I+    N         F  M
Sbjct: 196 HCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREM 255

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIKIDG--PLGNSFIVMYSKC 244
                +PD V++ S+  AC  L  L     S+H   ++   +      + NS +  YS+ 
Sbjct: 256 SCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEF 315

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G   +A++ F     R   SW AMI    ++    +AL + ++ + ++ +P++ TL+T++
Sbjct: 316 GMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEAL-AVLRQMRLENQPDVATLVTIV 374

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
             CA  G L EG+++H  +IRKG+  E   +G +L++ Y +C + S    +   +  R++
Sbjct: 375 SGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDL 434

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPD--SFSVASSLS---ACGNVGSLQLGL 419
           +SWN +IS Y+R G  +E  +L+ +    GL+ +  S S+A+ L+   +C     L  G 
Sbjct: 435 ISWNTMISGYSRYGPLREEAQLMFK----GLLSEGSSCSLATMLAVIPSCSIPEELSFGK 490

Query: 420 QIHGHVIKIDCKDEFVQS--SLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQ 476
            +H   +K       V +  +LI MY  CG    A+ L ERI   S ++ WN++I G  Q
Sbjct: 491 ALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVGCLQ 550

Query: 477 NGNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           N    +A+ +F  MY +  +  D +T ++ + AC ++  L  GK +H  ++ +    ++ 
Sbjct: 551 NELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLR 610

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           +  +L  MY + GD ++A+ VF SM + N+ SW+ MI  +  + +   A   +++M D  
Sbjct: 611 VKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKMED-- 668

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            +PNE++ + I+ AC+  G   +GK     +    +  ++   A +VD+  + G ++ A 
Sbjct: 669 FEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAV 728

Query: 656 KMIHSMPFPANGSI--WGALLNGCRIH----KRIDV 685
           ++  +    A  SI  W +L++    H    K ID+
Sbjct: 729 RVFEA---SAEKSIAGWNSLISAFGFHGHGMKSIDL 761



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 156/588 (26%), Positives = 268/588 (45%), Gaps = 20/588 (3%)

Query: 106 SSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV-------FDKMTS 158
           SS GD      +H   +K G   D  ++TS+L  Y   G    A          F +  +
Sbjct: 65  SSSGDTACIACLHCAALKSGAVLDPPVRTSLLAAYARAGRGAGAGAGAGAALALFREAVA 124

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
            DV+ W++ + +   +    +   +F  M RE  E D  T++ +        +LR    +
Sbjct: 125 PDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMEL 184

Query: 219 HGHVLRRKIKIDGPLG--NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           HG   +  +     LG  N+ + MY+KCG+  SAE  F  +  R TTSW ++IS    +G
Sbjct: 185 HGMAAKSCLGAHC-LGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNG 243

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE-GKSVHCQIIRKGMGPEYD-Y 334
             + +   F +M     +P+ ++L +VL +C+ L  L   G+SVH   ++ G        
Sbjct: 244 LAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCS 303

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +L+ FY+E G     +KV  +   RN++SWN +I    +     EAL +L QM+   
Sbjct: 304 VANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN 363

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLA 452
             PD  ++ + +S C + G L  G  +HG+VI+     ++  + +SL+D+Y KC   + A
Sbjct: 364 -QPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNA 422

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL-FHQMYLNCLEMDEVTFLTAIQACSN 511
            LLF  + ++ ++ WN+MI G+ + G   E   L F  +          T L  I +CS 
Sbjct: 423 GLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSI 482

Query: 512 IGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDS-MSERNVVSWS 569
             +L  GK +H   +  G     +    AL  MY  CGD   A  + +  +   +++SW+
Sbjct: 483 PEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWN 542

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDS-GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
            +I     +    DA  +F+ M  S  I P+ +T +++L AC     +  GK     +  
Sbjct: 543 TVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILK 602

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                +L+    ++ +  R GD   A  + +SM    N   W  +++G
Sbjct: 603 HLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMG-DTNLCSWNCMISG 649


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/694 (33%), Positives = 369/694 (53%), Gaps = 42/694 (6%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F ++I  Y  M+       NF +P+VL+A + + DL  G+++H  + K G      +  S
Sbjct: 66  FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  YG+ G +D AR+VFD++T+RD VSW+S+I +     +    + +F  M+ E V P 
Sbjct: 126 LVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185

Query: 196 FVTMLSLAEACGELCS-LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
             T++S+A AC  L + L   + +H  VLR          N+ + MY+K G +  A+  F
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLF 244

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
              + +   SW  +IS  +++  F++AL     ML+    PN +TL +VL +C+ L  L 
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLG 304

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  ++      E  ++G AL++ Y  C +  +   V   +  R I  WN +I+ Y
Sbjct: 305 CGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGY 364

Query: 375 ARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KD 432
            R     EA+EL V+M    GL P+S +++S L AC    S      IH  V+K    KD
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKD 424

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY- 491
           ++VQ++L+DMYS+ G   +A  +F  + +K +V WN+MI G+   G   +A+NL H M  
Sbjct: 425 KYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQR 484

Query: 492 ------LNC-----------LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
                 +N            L+ + VT +T +  C+ +  L KGK +H   +   + KD+
Sbjct: 485 GQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDV 544

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            + +AL DMYAKCG L  ++ VF+ MS RNV++W+ +I  YGMHG+  +A  LF++M++ 
Sbjct: 545 AVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEE 604

Query: 595 G-----IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRS 648
           G     I+PNEVT++ I  + SHSG V+EG   F  M+   G+EP   HYAC+VDLL RS
Sbjct: 605 GDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRS 664

Query: 649 GDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
           G IE A+ +I +MP        W +LL  C+IH+ +++ +   K L V   N   Y T  
Sbjct: 665 GQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQ 724

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           S +  +             M+  G++K PG S I
Sbjct: 725 SMLGRK-------------MKEKGVRKEPGCSWI 745



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 170/620 (27%), Positives = 303/620 (48%), Gaps = 39/620 (6%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHAH+   G          L+  Y + G + ++R VFD     D   W  +I       
Sbjct: 106 QLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFE 165

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSL-GDLGSGEKVHGRIIKCGFDKDDVIQ 133
            +E ++ L+  M+ E    ++F   SV  ACS+L   L  G++VH  +++ G D      
Sbjct: 166 EWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTN 224

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y + G + +A+ +FD    +D+VSW++II+S   N    E L   H M++ GV 
Sbjct: 225 NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVR 284

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAER 252
           P+ VT+ S+  AC  L  L   + IH  VL     I+   +G + + MY  C        
Sbjct: 285 PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRL 344

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLG 311
            F  + +R    W AMI+ Y R+ +  +A+E FV+M+ E+   PN +TL +VL +C    
Sbjct: 345 VFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCE 404

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
              + + +H  +++ G   +  Y+  AL++ Y+  G++     +  ++  ++I+SWN +I
Sbjct: 405 SFLDKEGIHSCVVKWGFEKD-KYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMI 463

Query: 372 SEYARKGMSKEALELLVQMQ------------------TWGLMPDSFSVASSLSACGNVG 413
           + Y   G   +AL LL  MQ                   + L P+S ++ + L  C  + 
Sbjct: 464 TGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALA 523

Query: 414 SLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           +L  G +IH + +K +  KD  V S+L+DMY+KCG  NL+  +FE++  ++V+ WN +I 
Sbjct: 524 ALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIM 583

Query: 473 GFYQNGNSLEAINLFHQMYL---NCLEM--DEVTFLTAIQACSNIGQLEKGKWVHHKL-I 526
            +  +G   EA+ LF +M     N  E+  +EVT++    + S+ G +++G  + + +  
Sbjct: 584 AYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKA 643

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLN-- 582
            +G+         L D+  + G ++ A  +  +M    + V +WS+++    +H  L   
Sbjct: 644 KHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIG 703

Query: 583 --DAASLF---KQMLDSGIK 597
              A +LF     +LD G K
Sbjct: 704 EIAAKNLFVLDPNVLDYGTK 723



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 196/411 (47%), Gaps = 5/411 (1%)

Query: 255 VKIEKRCTTSWTAMI-SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           V  E R  + W + + S    S  F +A+ ++  M+     P+      VL + AG+  L
Sbjct: 42  VAAEPRLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDL 101

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             GK +H  + + G       +  +L+  Y +CG +    +V   I  R+ +SWN +I+ 
Sbjct: 102 NLGKQLHAHVFKFGQALP-TAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINA 160

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCKD 432
             R    + A+ L   M    + P SF++ S   AC N +  L LG Q+H  V++     
Sbjct: 161 ACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWR 220

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            F  ++L+ MY+K G    A  LF+    K +V WN++I    QN    EA+   H M  
Sbjct: 221 TFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQ 280

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           + +  + VT  + + ACS++  L  GK +H   L++  + ++ ++  AL DMY  C   +
Sbjct: 281 SGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPE 340

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEVTFMNILWAC 610
             + VFD M  R +  W+AMI  Y  +    +A  LF +M+ + G+ PN VT  ++L AC
Sbjct: 341 KGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPAC 400

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
               S  + +   + +  +G E D      ++D+ SR G IE A  +  SM
Sbjct: 401 VRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM 451



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 23/225 (10%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P    C +      +H+ ++  G   D      L++ Y+ MG +  +R +F +    D 
Sbjct: 397 LPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDI 456

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQAT--ISNFI-------YP---------SVL 102
             W  +I  Y+     ++++ L H M R QA   I+ F        +P         +VL
Sbjct: 457 VSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVL 516

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVV 162
             C++L  LG G+++H   +K    KD  + ++++  Y + GCL+ +R VF++M+ R+V+
Sbjct: 517 PGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVI 576

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREG-----VEPDFVTMLSL 202
           +W+ +I +Y  +    E LK+F  MV EG     + P+ VT +++
Sbjct: 577 TWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAI 621



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 11/181 (6%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M +   C  L  L +   +HA+ +   L  D    + L++ YA+ G L  SR VF+    
Sbjct: 513 MTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSV 572

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-----QATISNFIYPSVLRACSSLGDLG 112
            +   W VLI  Y  +   EE++ L+ +M+ E     +   +   Y ++  + S  G + 
Sbjct: 573 RNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVD 632

Query: 113 SGEKV-HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVVSWSSIIA 169
            G  + +    K G +        ++   G  G +++A  +   M S  + V +WSS++ 
Sbjct: 633 EGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLG 692

Query: 170 S 170
           +
Sbjct: 693 A 693


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/750 (30%), Positives = 396/750 (52%), Gaps = 32/750 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C +L  L     +H+ ++ TGLH D   ++ LI  Y + G+   +  VFD   +  
Sbjct: 59  LLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSG 118

Query: 59  ----DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
               D  +W  +I  Y      EE ++ + +M   Q++                     G
Sbjct: 119 VSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM---QSS-----------------GYKEG 158

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFD 173
           +++H  I++   + D  ++T+++ TY + G   +AR +F K+  R ++V+W+ +I  + +
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           N      L+ +     E V+    +      ACG+   +   + +H   ++   + D  +
Sbjct: 219 NGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
             S + MY KC  + SAE+ F ++  +    W A+IS Y  +G+   AL  + +M     
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTV 338

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             +  T++ VL S +  G    G+ +H +I+++ +      +  AL+  Y++ G  +   
Sbjct: 339 LSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSIT-IQSALLTMYSKFGDSNYAN 397

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +   + ER++++W  +IS + +    KEAL+    M+   + PDS  +AS +SAC  + 
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            + LG  IHG VIK   + D FV SSL+DMYSK GF   A  +F  +  K++V WNS+I 
Sbjct: 458 KVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIIS 517

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            + +N     +INLF Q+  N L  D V+F + + A S++  L KGK VH  L+   +  
Sbjct: 518 CYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPF 577

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+ ++  L DMY KCG L+ AQ +F+ +SE+N+V+W++MI  YG HG+ + A  LF +M 
Sbjct: 578 DLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMR 637

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDI 651
            SGIKP++VTF+++L +C+HSG +EEG   F  M++ FG+EP ++HY  +VDL  R+G +
Sbjct: 638 SSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCL 697

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
             A+  + +MP   + SIW +LL  C+IH  +++ + +  +L     +    Y  L N+Y
Sbjct: 698 GDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLY 757

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            E   WD    +R+ M+  GLKK PG S I
Sbjct: 758 GEAELWDRTANLRASMKEKGLKKTPGCSWI 787



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 181/654 (27%), Positives = 321/654 (49%), Gaps = 38/654 (5%)

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           IK  +    + E++ LY K        + F YPS+L+AC+SL +L  G+ +H  II  G 
Sbjct: 28  IKSLVQQRQYIEALKLYTK---SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-----DVVSWSSIIASYFDNADVSEGL 181
             D  I +S++  Y + G   DA KVFD++        DV  W+SII  YF    + EG+
Sbjct: 85  HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
             F  M   G                     +  + IH +++R  +  D  L  + I  Y
Sbjct: 145 VQFGRMQSSG--------------------YKEGKQIHSYIVRNMLNFDPFLETALIDTY 184

Query: 242 SKCGDLLSAERTFVKIEKRCT-TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI-- 298
            KCG    A   F K++ R    +W  MI  +  +G ++ +LE +  +L   E   ++  
Sbjct: 185 FKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYY--LLAKTENVKVVSS 242

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           +    L +C    ++  GK VHC  I+ G   +  Y+  +L+  Y +C  +   EKV + 
Sbjct: 243 SFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDD-PYVHTSLLTMYGKCQMIESAEKVFNE 301

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + ++ I  WN LIS Y   G + +AL +  QM+   ++ DSF++ + L++    G   LG
Sbjct: 302 VPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLG 361

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             IH  ++K   +    +QS+L+ MYSK G  N A  +F  ++++ VV W S+I GF QN
Sbjct: 362 RLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQN 421

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
               EA++ F  M  + ++ D     + I AC+ + +++ G  +H  +I  G++ D+++ 
Sbjct: 422 RKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVA 481

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           ++L DMY+K G  + A  +F  M  +N+V+W+++I CY  +   + + +LF Q+L + + 
Sbjct: 482 SSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLY 541

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+ V+F ++L A S   ++ +GK     +    +  DLQ    ++D+  + G ++ A  +
Sbjct: 542 PDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHI 601

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG--TNDNGYYTLLSN 709
              +    N   W +++ G   H        +  E+  +G   +D  + +LLS+
Sbjct: 602 FERIS-EKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSS 654



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 161/354 (45%), Gaps = 47/354 (13%)

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLI 440
           EAL+L  +   +      F+  S L AC ++ +LQ G  IH  +I      D+++ SSLI
Sbjct: 39  EALKLYTKSPVY---TTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLI 95

Query: 441 DMYSKCGFKNLAYLLFERIQQK-----SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
           ++Y KCG    A  +F+++ +       V +WNS+I G+++ G   E +  F +M     
Sbjct: 96  NIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM----- 150

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
                               ++GK +H  ++   +  D +++TAL D Y KCG    A+ 
Sbjct: 151 ---------------QSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARY 195

Query: 556 VFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           +F  + +R N+V+W+ MI  +G +G   ++   +       +K    +F   L AC    
Sbjct: 196 LFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGE 255

Query: 615 SVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            V  GK  + +A+++ G E D   +  ++ +  +   IE A K+ + +P      +W AL
Sbjct: 256 FVSFGKQVHCDAIKV-GFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVP-DKEIELWNAL 313

Query: 674 L----------NGCRIHKRIDVMKTIEKELSV----TGTNDNGYYTLLSNIYAE 713
           +          +  RI+K++ +   +    ++    T ++  G Y L   I+ E
Sbjct: 314 ISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTE 367


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/622 (33%), Positives = 340/622 (54%), Gaps = 12/622 (1%)

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
           C    D V++   L    + G L DA  +FD+M  ++VV+W+S+++ Y  N      L M
Sbjct: 42  CAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAM 101

Query: 184 FHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           F  MV  GV P DF    +L  AC +L +LR    +H   +R     D  +G+  I MYS
Sbjct: 102 FADMVESGVAPNDFACNAALV-ACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYS 160

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           +CG L +A+  F +++      +T++IS + R+G F+ A E+ ++ML+   +PN  T+ T
Sbjct: 161 RCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTT 220

Query: 303 VLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +L +C  +     G+ +H  +I+K G+  +  Y   ALI+FY+  G+    + V  ++  
Sbjct: 221 ILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHC 276

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           +N++SW  ++  Y R G  +EAL++   M + G+ P+ F+++  L ACG++G   LG Q+
Sbjct: 277 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQL 333

Query: 422 HGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H   IK D   D  V ++L+ MY + G       +  +I+   +V W + I   +QNG  
Sbjct: 334 HCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFG 393

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +AI L  QM+      +   F + + +C+++  L++G   H   +  G   +I    AL
Sbjct: 394 EKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNAL 453

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            +MY+KCG + +A+  FD M   +V SW+++I  +  HG  N A  +F +M  +GIKP++
Sbjct: 454 INMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 513

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
            TF+ +L  C+HSG VEEG+ +F  M   +   P   HYACM+D+L R+G  + A +MI+
Sbjct: 514 STFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIN 573

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MPF  +  IW  LL  C++H+ +D+ K     L      D+  Y L+SNIYA  G W++
Sbjct: 574 DMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWED 633

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             KVR  M+ TG+KK  G S I
Sbjct: 634 ARKVRRRMDETGVKKDAGCSWI 655



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 297/607 (48%), Gaps = 53/607 (8%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
            RL++S    G L  +  +FD     +   W  ++  Y  N   E ++ ++  M+     
Sbjct: 56  NRLVKS----GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVA 111

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
            ++F   + L AC+ LG L +GE+VH   ++ GF  D  I + ++  Y   G L  A++V
Sbjct: 112 PNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEV 171

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD+M S DVV ++S+I+++  N +     +    M+++G++P+  TM ++  AC  +   
Sbjct: 172 FDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL-- 229

Query: 213 RPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
              + IHG+++ +KI +         + I  YS+ G+   A+  F  +  +   SW +M+
Sbjct: 230 --GQQIHGYLI-KKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMM 286

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
             Y R G  ++AL+ F  M+    +PN   L  VLG+C  +G    G+ +HC  I+  + 
Sbjct: 287 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLI 343

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   +  AL+  Y   G + E E +++ I   +++SW   IS   + G  ++A+ LL Q
Sbjct: 344 TDI-RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQ 402

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGF 448
           M + G  P+ ++ +S LS+C +V SL  G+Q H   +K+ C  E    ++LI+MYSKCG 
Sbjct: 403 MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQ 462

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A L F+ +    V  WNS+I G  Q+G++ +A+ +F +M  N ++ D+ TFL  +  
Sbjct: 463 MGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMG 522

Query: 509 CSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM------- 560
           C++ G +E+G+     +I  Y           + DM  + G    A R+ + M       
Sbjct: 523 CNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDAL 582

Query: 561 ----------------------------SERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
                                       S+R+  S+  M + Y MHG+  DA  + ++M 
Sbjct: 583 IWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMD 642

Query: 593 DSGIKPN 599
           ++G+K +
Sbjct: 643 ETGVKKD 649



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 170/351 (48%), Gaps = 20/351 (5%)

Query: 31  ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           +ST LI+ Y+  G  + ++ VFD+    +   W  +++ Y+ +   EE++ ++  MI E 
Sbjct: 250 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 309

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
              + F    VL AC   G +G G ++H   IK     D  +  ++L  YG  G +++  
Sbjct: 310 VDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 366

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            + +K+ + D+VSW++ I++ F N    + + +   M  EG  P+     S+  +C ++ 
Sbjct: 367 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 426

Query: 211 SLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           SL   + +  H L  K+  D  +  GN+ I MYSKCG + SA   F  +     TSW ++
Sbjct: 427 SLD--QGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSL 484

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I  + + G   KALE F KM     +P+  T + VL  C   G + EG     ++  + M
Sbjct: 485 IHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG-----ELFFRLM 539

Query: 329 GPEYDYLGPA------LIEFYAECGKMSECEKVIHAIG-ERNILSWNMLIS 372
             +Y +  PA      +I+     G+  E  ++I+ +  E + L W  L++
Sbjct: 540 IDQYSFT-PAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 589



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           +C ++    +LH   +   L  D   S  L+  Y   G +     + +  + PD   W  
Sbjct: 323 ACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTT 382

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
            I     N F E++I L  +M  E  T + + + SVL +C+ +  L  G + H   +K G
Sbjct: 383 AISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG 442

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D +     +++  Y + G +  AR  FD M + DV SW+S+I  +  + D ++ L++F 
Sbjct: 443 CDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFS 502

Query: 186 SMVREGVEPDFVTMLSLAEAC 206
            M   G++PD  T L +   C
Sbjct: 503 KMRSNGIKPDDSTFLGVLMGC 523


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/714 (30%), Positives = 376/714 (52%), Gaps = 9/714 (1%)

Query: 36  IESYAEM----GSLR--SSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE 89
           IE+YA +    G  R  S   VFD  ++  +F W  LI  Y+ N     ++ +Y  M  E
Sbjct: 97  IEAYAYLLELCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVE 156

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
              +  + +P +L+AC  L D+ SG ++H  ++K GF+    I  +++  Y +   L  A
Sbjct: 157 GVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAA 216

Query: 150 RKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           +++FD    + D V W+SI++SY  +    E L++F  M   G   +  T++S   AC  
Sbjct: 217 KRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEG 276

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
               +  + IH  VL+     +  + N+ I MY++CG +L A R    +      +W ++
Sbjct: 277 FSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSL 336

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I  Y ++  +++AL+ F  M+    +P+ ++L +V+ +   L  L  G  +H  +I+ G 
Sbjct: 337 IKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGW 396

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
                 +G  LI+ Y++C       +    + E++++SW  +I+ YA      EAL+L  
Sbjct: 397 DSNL-LVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFR 455

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
            +    +  D   + S L AC  + S+ +  +IH H+++    D  +Q+ L+D+Y KC  
Sbjct: 456 DVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNELVDVYGKCRN 515

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  +FE I+ K VV W SMI     NGN  EA+ LF +M    L  D V  L  + A
Sbjct: 516 MGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSA 575

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
            +++  L+KG+ +H  L+  G   +  I  A+ DMYA CGDLQ+A+ VFD +  + ++ +
Sbjct: 576 AASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 635

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           ++MI+ YGMHG    +  LF +M    + P+ ++F+ +L+ACSH+G ++EG+ +   M +
Sbjct: 636 TSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMEL 695

Query: 629 -FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            + +EP  +HY C+VD+L R+  +  AF+ +  M       +W ALL  CR H   ++ +
Sbjct: 696 EYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGE 755

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + L      + G   L+SN++AE+G W++  KVR+ M+ +G++K PG S I
Sbjct: 756 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 809



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 272/522 (52%), Gaps = 7/522 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C  LR +   T LH  L+  G +        L+  YA+   L +++ +FD  +E  
Sbjct: 168 LLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKG 227

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D+ +W  ++  Y  +    E++ L+ +M       +++   S L AC        G+++H
Sbjct: 228 DAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIH 287

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             ++K     +  +  +++  Y   G + +A ++   M + DVV+W+S+I  Y  N    
Sbjct: 288 AAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYK 347

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L+ F  M+  G +PD V++ S+  A G L +L     +H +V++     +  +GN+ I
Sbjct: 348 EALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLI 407

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKC       R F+ + ++   SWT +I+ Y  +    +AL+ F  + + + E + +
Sbjct: 408 DMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEM 467

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            L ++L +C+ L  +   K +HC I+RKG+      +   L++ Y +C  M    +V  +
Sbjct: 468 MLGSILRACSVLKSMLIVKEIHCHILRKGLID--TVIQNELVDVYGKCRNMGYASRVFES 525

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I  ++++SW  +IS  A  G   EA+EL  +M   GL+ DS ++   LSA  ++ +L+ G
Sbjct: 526 IKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKG 585

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            +IHG++++   C +  +  +++DMY+ CG    A  +F+RI++K ++ + SMI  +  +
Sbjct: 586 REIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 645

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           G    ++ LF++M    +  D ++FL  + ACS+ G L++G+
Sbjct: 646 GCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGR 687



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 52/106 (49%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           +K   +H +LL  G   +   +  +++ YA  G L+S++ VFD  +      +  +I  Y
Sbjct: 583 KKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 642

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             +   + S+ L++KM  E  +  +  + ++L ACS  G L  G +
Sbjct: 643 GMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRR 688


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/744 (28%), Positives = 375/744 (50%), Gaps = 31/744 (4%)

Query: 4   FRSCT-NLRK---LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
            R+C  N R+   +  +HA  +  GL  D      LI+ Y++ G +  +R VF+     D
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARD 107

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  ++  Y  N   EE++ LY +M R     + ++  SVL +C+       G  VH 
Sbjct: 108 NVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHA 167

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +  K GF  +  +  +++  Y   G    A +VF  M  RD V+++++I+ +   A    
Sbjct: 168 QGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEH 227

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M   G+ PD VT+ SL  AC  L  L+    +H ++ +  +  D  +  S + 
Sbjct: 228 ALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLD 287

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KCGD+ +A   F    +     W  ++  + +     K+ E F +M      PN  T
Sbjct: 288 LYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFT 347

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L +C   G +  G+ +H   ++ G   +  Y+   LI+ Y++ G + +  +V+  +
Sbjct: 348 YPCILRTCTCTGEIDLGEQIHSLSVKTGFESDM-YVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++++SW  +I+ Y +    K+AL    +MQ  G+ PD+  +AS++S C  + +++ GL
Sbjct: 407 KEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGL 466

Query: 420 QIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH  V +     D  + ++L+++Y++CG    A+  FE I+ K  + WN ++ GF Q+G
Sbjct: 467 QIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSG 526

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA+ +F +M  + ++ +  TF++A+ A +N+ ++++GK +H ++I  G   +  +  
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN 586

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  +Y KCG  + A+  F  MSERN VSW+ +I     HG+  +A   F QM       
Sbjct: 587 ALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQM------- 639

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
                             +EG  YF +M   +G+ P   HYAC++D+  R+G ++ A K 
Sbjct: 640 -----------------KKEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKF 682

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           +  MP  A+  +W  LL+ C++HK I+V +   K L     +D+  Y LLSN YA  G W
Sbjct: 683 VEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKW 742

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
               +VR +M   G++K PG S I
Sbjct: 743 ANRDQVRKMMRDRGVRKEPGRSWI 766



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 183/671 (27%), Positives = 326/671 (48%), Gaps = 29/671 (4%)

Query: 82  LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK------VHGRIIKCGFDKDDVIQTS 135
           L+    R+   +    +   LRAC      G+G +      +H + I  G  KD ++   
Sbjct: 28  LFADKARQHGGLGPLDFACALRACR-----GNGRRWQVVPEIHAKAITRGLGKDRIVGNL 82

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +  AR+VF+++++RD VSW ++++ Y  N    E L ++  M R GV P 
Sbjct: 83  LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPT 142

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S+  +C +       RS+H    ++    +  +GN+ I +Y +CG    AER F 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFY 202

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R T ++  +IS + +    + ALE F +M      P+ +T+ ++L +CA LG L++
Sbjct: 203 DMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQK 262

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLISEY 374
           G  +H  + + GM  +Y   G +L++ Y +CG + E   VI  +G R N++ WN+++  +
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEG-SLLDLYVKCGDV-ETALVIFNLGNRTNVVLWNLILVAF 320

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
            +     ++ EL  QMQT G+ P+ F+    L  C   G + LG QIH   +K   + D 
Sbjct: 321 GQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDM 380

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           +V   LIDMYSK G+   A  + E +++K VV W SMI G+ Q+    +A+  F +M   
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKC 440

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +  D +   +AI  C+ I  + +G  +H ++   G   D+ I  AL ++YA+CG ++ A
Sbjct: 441 GIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREA 500

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
              F+ +  ++ ++W+ ++  +   G   +A  +F +M  SG+K N  TF++ L A ++ 
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
             +++GK     +   G   + +    ++ L  + G  E A KM  S     N   W  +
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA-KMEFSEMSERNEVSWNTI 619

Query: 674 LNGCRIHKR----IDVMKTIEKE-LSVTGTNDNGY--------YTLLSNIYAEEGNWDEF 720
           +  C  H R    +D    ++KE LS   +  + Y        Y  + +I+   G  D  
Sbjct: 620 ITSCSQHGRGLEALDFFDQMKKEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRA 679

Query: 721 GKVRSIMEVTG 731
            K    M +  
Sbjct: 680 KKFVEEMPIAA 690


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 230/790 (29%), Positives = 407/790 (51%), Gaps = 55/790 (6%)

Query: 3   LFRSCTNL--RKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + +SC+ L    L R LH +++  G       +  L+  YA+ G L     +FD     D
Sbjct: 49  ILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCD 108

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIR--EQATISNFIYPSVLRACSSLGDLGSGEKV 117
             +W +++  +  +N  +  ++   +M+    +A  ++    +VL  C+ LGDL +G+ V
Sbjct: 109 PVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCV 168

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLD-DARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           HG +IK GFD+D +   +++  Y + G +  DA  VFD +  +DVVSW+++IA   +N  
Sbjct: 169 HGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRL 228

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL---CSLRPARSIHGHVLR-RKIKIDGP 232
           V +   +F SMV+    P++ T+ ++   C       +    R IH +VL+  ++  D  
Sbjct: 229 VEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVS 288

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + N+ I +Y K G +  AE  F  ++ R   +W A I+ Y  +G + KAL  F  +  ++
Sbjct: 289 VCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLE 348

Query: 293 EE-PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P+ +T++++L +CA L  L+ GK +H  I R         +G AL+ FYA+CG   E
Sbjct: 349 TLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEE 408

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
                  I  ++++SWN +   +  K      L LL  M    + PDS ++ + +  C +
Sbjct: 409 AYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCAS 468

Query: 412 VGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCG--------FKNL-------- 451
           +  ++   +IH + I+    +      V ++++D YSKCG        F+NL        
Sbjct: 469 LLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVT 528

Query: 452 ----------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
                           A ++F  + +  +  WN M+  + +N    +A+ L H++    +
Sbjct: 529 CNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGM 588

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR---KDIYIDTALTDMYAKCGDLQT 552
           + D VT ++ +  C+ +  +     +  +   Y +R   KD++++ AL D YAKCG +  
Sbjct: 589 KPDTVTIMSLLPVCTQMASVH----LLSQCQGYIIRSCFKDLHLEAALLDAYAKCGIIGR 644

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A ++F   +E+++V ++AMI  Y MHG   +A  +F  ML  GI+P+ + F +IL ACSH
Sbjct: 645 AYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSH 704

Query: 613 SGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G V+EG K +++  ++ G++P ++ YAC+VDLL+R G I  A+ ++ S+P  AN ++WG
Sbjct: 705 AGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEANANLWG 764

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
            LL  C+ H  +++ + +  +L     ND G Y +LSN+YA +  WD   +VR +M    
Sbjct: 765 TLLGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSNLYAADARWDGVMEVRRMMRNKD 824

Query: 732 LKKVPGYSTI 741
           LKK  G S I
Sbjct: 825 LKKPAGCSWI 834



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 196/742 (26%), Positives = 350/742 (47%), Gaps = 85/742 (11%)

Query: 55  FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR--EQATISNFIYPSVLRACSSLGDLG 112
           FK   S +W++ ++         E++ L+H  ++  E     + +  ++L++CS+L    
Sbjct: 6   FKTWGSVIWSLCLEAK-----HSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
            G  +HG ++K G     V    +L  Y + G L +  K+FD+++  D V W+ +++ + 
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 173 D----NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
                +ADV    +M HS  RE + P+ VT+ ++   C  L  L   + +HG+V++    
Sbjct: 121 GSNKCDADVMRVFRMMHSS-REAL-PNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFD 178

Query: 229 IDGPLGNSFIVMYSKCGDLLS--AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
            D   GN+ + MY+KCG L+S  A   F  I  +   SW AMI+    +   + A   F 
Sbjct: 179 QDTLGGNALVSMYAKCG-LVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFS 237

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLRE---GKSVHCQIIRKGMGPEYDY---LGPALI 340
            M++    PN  T+  +L  CA          G+ +H  +++    PE      +  ALI
Sbjct: 238 SMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQ---WPELSADVSVCNALI 294

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL---LVQMQTWGLMP 397
             Y + G+M E E +   +  R++++WN  I+ Y   G   +AL L   L  ++T  L+P
Sbjct: 295 SLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLET--LLP 352

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           DS ++ S L AC  + +L++G QIH ++ +      D  V ++L+  Y+KCG+   AY  
Sbjct: 353 DSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHT 412

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F  I  K ++ WNS+   F +  +    ++L H M    +  D VT L  I+ C+++ ++
Sbjct: 413 FSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRV 472

Query: 516 EKGKWVHHKLISYGVRKDIY-------IDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVS 567
           EK K +H    SY +R           +  A+ D Y+KCG+++ A ++F ++SE RN+V+
Sbjct: 473 EKVKEIH----SYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVT 528

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDS-------------------------------GI 596
            +++I  Y   G  +DA  +F  M ++                               G+
Sbjct: 529 CNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGM 588

Query: 597 KPNEVTFMNILWACSHSGSVE---EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
           KP+ VT M++L  C+   SV    + + Y     I     DL   A ++D  ++ G I  
Sbjct: 589 KPDTVTIMSLLPVCTQMASVHLLSQCQGYI----IRSCFKDLHLEAALLDAYAKCGIIGR 644

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN-DNGYYTLLSNIYA 712
           A+K I  +    +  ++ A++ G  +H   +    I   +   G   D+  +T + +  +
Sbjct: 645 AYK-IFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACS 703

Query: 713 EEGNWDEFGKV-RSIMEVTGLK 733
             G  DE  K+  SI ++ G+K
Sbjct: 704 HAGRVDEGLKIFYSIEKLHGMK 725



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 261/549 (47%), Gaps = 42/549 (7%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR--EGVEPDFVTMLSLAEACGELCSLR 213
           M  RD  +W S+I S    A  SE L +FH  ++  E  +PD   + ++ ++C  L +  
Sbjct: 1   MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             R++HG+V+++            + MY+KCG L+   + F ++       W  ++S ++
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 274 RSGWFQKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            S      +    +M+    E  PN +T+ TVL  CA LG L  GK VH  +I+ G   +
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGF--D 178

Query: 332 YDYL-GPALIEFYAECGKMS-ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            D L G AL+  YA+CG +S +   V   I  ++++SWN +I+  A   + ++A  L   
Sbjct: 179 QDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSS 238

Query: 390 MQTWGLMPDSFSVASSLSACGNVG---SLQLGLQIHGHVIKID--CKDEFVQSSLIDMYS 444
           M      P+  +VA+ L  C +     +   G QIH +V++      D  V ++LI +Y 
Sbjct: 239 MVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYL 298

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFL 503
           K G    A  LF  +  + +V WN+ I G+  NG  L+A++LF  +  L  L  D VT +
Sbjct: 299 KVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMV 358

Query: 504 TAIQACSNIGQLEKGKWVH-----HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           + + AC+ +  L+ GK +H     H  + Y    D  +  AL   YAKCG  + A   F 
Sbjct: 359 SILPACAQLKNLKVGKQIHAYIFRHPFLFY----DTAVGNALVSFYAKCGYTEEAYHTFS 414

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS------- 611
            +S ++++SW+++ D +G     +   SL   ML   I+P+ VT + I+  C+       
Sbjct: 415 MISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEK 474

Query: 612 ----HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
               HS S+  G    N     G          ++D  S+ G++E A KM  ++    N 
Sbjct: 475 VKEIHSYSIRTGSLLSNTAPTVG--------NAILDAYSKCGNMEYANKMFQNLSEKRNL 526

Query: 668 SIWGALLNG 676
               +L++G
Sbjct: 527 VTCNSLISG 535


>gi|296085462|emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/740 (31%), Positives = 383/740 (51%), Gaps = 33/740 (4%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL +   LH     TGL  D      LI+ YA+ G L SS  VF   +  D   W  +++
Sbjct: 129 NLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMR 188

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD- 127
              +NN+ ++S+  + KM        N      + A + LG+L  G+ +HG  IK G+  
Sbjct: 189 GCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKD 248

Query: 128 -KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
              +  + S++  Y +   +  A  +F +M  +D+VSW++++     N  + E   + H 
Sbjct: 249 ISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHE 308

Query: 187 MVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           M   G V+PD VT++ +   C EL  LR  R++HG  LRR++ +D  + NS I MYSKC 
Sbjct: 309 MQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCK 368

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           D+  AE                       +G  ++A   F ++L+   + +L TL+ +L 
Sbjct: 369 DVKRAEH----------------------NGHSREAQHLFRQLLQSYSQCSLSTLLAILP 406

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNI 364
           SC    +L+ G+S+HC  ++ G       +  +L+  Y  CG +  C  ++  +    +I
Sbjct: 407 SCDSSEFLQFGESIHCWQLKLGFANNPLAVN-SLMLMYINCGDLVACFSLLQTVSAAADI 465

Query: 365 LSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           + WN +++   + G   EAL+    M Q   +  DS ++ + +SACGN+  L  G  +HG
Sbjct: 466 VCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHG 525

Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
             +K   + +  VQ++LI MY +CG    A ++F     +++  WN MI  F QN +   
Sbjct: 526 LALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRR 585

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A+ LF  +     E +E+T +  + AC+ +G L  GK +H  +I   ++ + ++  AL D
Sbjct: 586 ALELFCHIEF---EPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALED 642

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+ CG L TA ++F S  ER+V +W++MI  +G H     A  LF +M + G +P + T
Sbjct: 643 MYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKST 702

Query: 603 FMNILWACSHSGSVEEGKFYF-NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L ACSHSG V EG +Y+ N + +F VE D +H+ CMVD+L R+G +  A++ I  M
Sbjct: 703 FISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQM 762

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P      +WGALL+ C  H  + + + + + L      + GYY  LSN+Y   G W +  
Sbjct: 763 PTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAV 822

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           ++R I++  GLKK   YS I
Sbjct: 823 ELRRIIQDKGLKKPAAYSLI 842



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 177/691 (25%), Positives = 317/691 (45%), Gaps = 43/691 (6%)

Query: 30  PASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE 89
           P ST L+ +Y+      SS  +FD     D  +W  +I   + N  F  ++ L+ +++ E
Sbjct: 49  PTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGE 108

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
              + +     V+ A S +G+L  G  +HG   K G   D  +  +++  Y + G L  +
Sbjct: 109 GVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSS 168

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
             VF  M  RD++SW+S++     N    + L  F  M     + D V++     A   L
Sbjct: 169 ECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALL 228

Query: 210 CSLRPARSIHGHVLRRKIK--IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
             L   + IHG  ++   K        NS I +YS+C D+ +AE  F +++ +   SW A
Sbjct: 229 GELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNA 288

Query: 268 MISCYNRSGWFQKALESFVKMLEVK----EEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           M+     +   Q+  E+F  + E++     +P+ +T++ ++  CA L  LREG++VH   
Sbjct: 289 MLDGLALN---QRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLT 345

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           +R+ MG ++  +  +LI+ Y++C  +   E                        G S+EA
Sbjct: 346 LRREMGLDFS-VTNSLIDMYSKCKDVKRAE----------------------HNGHSREA 382

Query: 384 LELLVQ-MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLID 441
             L  Q +Q++     S ++ + L +C +   LQ G  IH   +K+    +    +SL+ 
Sbjct: 383 QHLFRQLLQSYSQCSLS-TLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLML 441

Query: 442 MYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDE 499
           MY  CG     + L + +   + +V WN+++ G  QNG+  EA+  F+ M  +  +  D 
Sbjct: 442 MYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDS 501

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           V     I AC N+  L  G  +H   +   +  DI +  AL  MY +CG+++ A+ +F  
Sbjct: 502 VALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGF 561

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
              RN+ SW+ MI  +  +     A  LF  +     +PNE+T + IL AC+  G +  G
Sbjct: 562 SCNRNLCSWNCMISAFSQNKDGRRALELFCHI---EFEPNEITIVGILSACTQLGVLRHG 618

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           K     +    ++ +    A + D+ S  G ++ AF++  S P   + + W ++++    
Sbjct: 619 KQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSP-ERSVAAWNSMISAFGF 677

Query: 680 HKRIDVMKTIEKELSVTGT--NDNGYYTLLS 708
           H        +  E+   GT    + + +LLS
Sbjct: 678 HSNGGKAIELFHEMRECGTRPTKSTFISLLS 708



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 13/155 (8%)

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI------DCYGMHGQLN 582
           G    +   T+L   Y++  D  ++  +FD +  R+V+ W+AMI       C+G+     
Sbjct: 43  GALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGV----- 97

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
            A +LF +++  G+  +  T + ++ A SH G++ +G+         G+  D      ++
Sbjct: 98  -AVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALI 156

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           D+ ++ G++  +  +   M +    S W +++ GC
Sbjct: 157 DMYAKCGELSSSECVFGGMEYRDIIS-WNSMMRGC 190


>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 757

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/690 (33%), Positives = 380/690 (55%), Gaps = 17/690 (2%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-----YPSVLRACSSLGDLGSGEKV 117
           W + IK    N  + E I  Y+++    A IS+ +     +P VL+ACS L  +  G+ +
Sbjct: 30  WTLRIKELSSNEKWHEVISQYYEI--TNAGISHHLLDVTLFPPVLKACSYLSYI-DGKCL 86

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  +IK  FD    I  SIL  Y + G LD A  VFD M SRD VSW+ +I    D   +
Sbjct: 87  HACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGAL 146

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            EGL  F +    G EP+  T++ L +AC  L + +    +HG++++  +     + NSF
Sbjct: 147 VEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSF 206

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPN 296
           + MY+   D+  A   F ++ ++   SW+AMI  Y +    Q  L+ F KML      P+
Sbjct: 207 LCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPD 265

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            + L++VL +CA    +  G+ VH   I +G+  +  ++  +LI+ Y++C       +V 
Sbjct: 266 GVILVSVLKACANSVNITMGRLVHGLTICRGLDSDL-FVKNSLIDMYSKCKDAGSAFEVF 324

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  RN +SWN L+S         EAL L+  M+T G+  D  ++ + L  C       
Sbjct: 325 SEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPY 384

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
               +H   I+  C+ +E V +SLID Y+KC    LA+ +F R +++ VV+W++MI GF 
Sbjct: 385 HCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFA 444

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
             G   EAI +F +M       + VT +  +QACS   +L++  W H   I  G+  ++ 
Sbjct: 445 HCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVA 504

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + TA+ DMY+KCG+++ +++ F+ + ++N+++WS MI  YGM+G  ++A +L  QM    
Sbjct: 505 VGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHE 564

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           IKPN +T++++L ACSH G VE G   F +M +  GV+P+ +HY+CMVD+LSR+G ++ A
Sbjct: 565 IKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDA 624

Query: 655 FKMIHSMP--FPANGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIY 711
            ++I  MP  F A  S+WGALL+ CR ++   +  K + + L +   N  GY  L S++Y
Sbjct: 625 MELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYL-LASSMY 683

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A +G WD   +++ +    G++ V GYS +
Sbjct: 684 ASDGLWDNAARMKLLARERGVRAVAGYSIV 713



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 282/568 (49%), Gaps = 11/568 (1%)

Query: 2   PLFRSCTNLRKLTR--LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           P+ ++C+ L  +    LHA L+ T           ++  Y + G L ++  VFD+ +  D
Sbjct: 70  PVLKACSYLSYIDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRD 129

Query: 60  SFMWAVLIKCYMWNNFFEESI--LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           S  W VLI   +      E +   +  ++   +  IS  +   +++AC SL     G ++
Sbjct: 130 SVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVL--LVQACRSLRAKQEGLQL 187

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG +I+ G      +Q S LC Y +   +D AR +FD+M  +DV+SWS++I  Y    + 
Sbjct: 188 HGYLIQSGLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQYLED 246

Query: 178 SEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             GL++F  M+    + PD V ++S+ +AC    ++   R +HG  + R +  D  + NS
Sbjct: 247 QIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNS 306

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MYSKC D  SA   F ++ +R   SW +++S    +  + +AL     M     E +
Sbjct: 307 LIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEAD 366

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +TL+  L  C         K+VHC  IR+G       L  +LI+ YA+C  +    +V 
Sbjct: 367 EVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLN-SLIDAYAKCNLIELAWEVF 425

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
                R+++ W+ +I+ +A  G   EA+ +  +M     +P++ ++ + L AC     L+
Sbjct: 426 SRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELK 485

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
             +  HG  I+     E  V ++++DMYSKCG    +   F +I QK+++ W++MI  + 
Sbjct: 486 RSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYG 545

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
            NG + EA+ L  QM  + ++ + +T+L+ + ACS+ G +E G  V   +I  +GV  + 
Sbjct: 546 MNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEF 605

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSE 562
              + + DM ++ G L  A  +   M E
Sbjct: 606 EHYSCMVDMLSRAGKLDDAMELIRMMPE 633



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 183/366 (50%), Gaps = 7/366 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C N   +T    +H   +  GL  D      LI+ Y++     S+  VF     
Sbjct: 270 VSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPR 329

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            ++  W  L+   + N  + E++LL + M  E          + L+ C         + V
Sbjct: 330 RNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAV 389

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   I+ G + ++++  S++  Y +   ++ A +VF +   RDVV WS++IA +      
Sbjct: 390 HCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKP 449

Query: 178 SEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            E + +F  M  EG+E P+ VT+++L +AC     L+ +   HG  +RR +  +  +G +
Sbjct: 450 DEAIAVFQKM-NEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTA 508

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MYSKCG++ ++ + F +I ++   +W+ MI+ Y  +G   +AL    +M   + +PN
Sbjct: 509 IVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPN 568

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKV 355
            +T ++VL +C+  G +  G SV   +I+  G+ PE+++    +++  +  GK+ +  ++
Sbjct: 569 ALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYS-CMVDMLSRAGKLDDAMEL 627

Query: 356 IHAIGE 361
           I  + E
Sbjct: 628 IRMMPE 633


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/602 (33%), Positives = 340/602 (56%), Gaps = 6/602 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPD-FVTMLS 201
           G L++AR++FDKM  RD +SW++II+ Y +  + +E L +F  M V  G+  D F+  L+
Sbjct: 15  GHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLA 74

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L +ACG   S+    S+HG+ ++        +G++ + MY K G +      F ++  R 
Sbjct: 75  L-KACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRN 133

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SWTA+I+   R+G+ ++AL  F  M   K   +  T  + L +CA  G L  G+ +HC
Sbjct: 134 VVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHC 193

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           Q ++KG      ++   L   Y +CGK+    ++  ++ +R+++SW  +I    + G  +
Sbjct: 194 QTLKKGF-TAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEE 252

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
            A++   +M+   + P+ F+ A+ +S C  +G ++ G Q+H HVI+    D   V +S++
Sbjct: 253 NAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIM 312

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MYSKC   +LA  +F+ + ++ ++ W++MI G+ Q G   EA +    M       +E 
Sbjct: 313 AMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEF 372

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            F + +  C N+  LE+GK +H  ++  G+ ++  + +AL +MY+KCG ++ A ++FD  
Sbjct: 373 AFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEA 432

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              N+VSW+AMI+ Y  HG   +A  LFK++   G++P+ VTF+ +L ACSH+G V+ G 
Sbjct: 433 EYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGF 492

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            YFN++ ++  + P   HY CM+DLL R+G +  A  MI SMPF  +  +W  LL  CRI
Sbjct: 493 HYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRI 552

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           H  +D  K   +++     N    +  L+N+YA +G W E  +VR +M+  G+ K PG+S
Sbjct: 553 HGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWS 612

Query: 740 TI 741
            I
Sbjct: 613 WI 614



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 182/610 (29%), Positives = 306/610 (50%), Gaps = 18/610 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT-I 93
           ++++  + G L ++R +FD   + D   W  +I  Y+      E++ L+ KM  E    +
Sbjct: 7   VLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHM 66

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
             FI    L+AC     +  GE +HG  +K  F     + ++++  Y + G +D+   VF
Sbjct: 67  DPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVF 126

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
            +M  R+VVSW++IIA         E L  F  M  + V  D  T  S  +AC +  +L 
Sbjct: 127 KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALN 186

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             R IH   L++       + N+   MY+KCG L    R F  + +R   SWT +I    
Sbjct: 187 YGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNV 246

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G  + A+++F +M E    PN  T   V+  CA LG +  G+ +H  +IR+G+     
Sbjct: 247 QIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLS 306

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  +++  Y++C ++     V   +  R+I+SW+ +IS YA+ G  +EA + L  M+  
Sbjct: 307 -VANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRRE 365

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLA 452
           G  P+ F+ AS LS CGN+  L+ G Q+H HV+ +   ++  VQS+LI+MYSKCG    A
Sbjct: 366 GPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA 425

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+  +  ++V W +MI G+ ++G S EAI+LF ++    L  D VTF+  + ACS+ 
Sbjct: 426 SKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHA 485

Query: 513 GQLEKGKWVHH-----KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           G ++ G   H+     K+      KD Y    + D+  + G L  A+ +  SM  +R+ V
Sbjct: 486 GLVDLG--FHYFNSLSKVHQICPSKDHY--GCMIDLLCRAGRLNDAESMIQSMPFQRDDV 541

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN-EVTFMNILWACSHSGSVEEGKFYFNA 625
            WS ++    +HG ++      +++L   + PN  VT + +    +  G  +E       
Sbjct: 542 VWSTLLRACRIHGDVDCGKRAAEKILQ--LDPNCAVTHITLANMYAAKGKWKEAAEVRKM 599

Query: 626 MRIFGV--EP 633
           M+  GV  EP
Sbjct: 600 MKSKGVVKEP 609



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 241/524 (45%), Gaps = 11/524 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH + + T         + L++ Y ++G +    +VF      +   W  +I   +   +
Sbjct: 90  LHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGY 149

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E++  +  M  ++     + + S L+AC+  G L  G ++H + +K GF     +  +
Sbjct: 150 NKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANT 209

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y + G LD   ++F+ MT RDVVSW++II S          +K F  M    V P+
Sbjct: 210 LATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPN 269

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  ++   C  L  +     +H HV+RR +     + NS + MYSKC  L  A   F 
Sbjct: 270 EFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQ 329

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +R   SW+ MIS Y + G  ++A +    M      PN     +VL  C  +  L +
Sbjct: 330 GLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQ 389

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +H  ++  G+  +   +  ALI  Y++CG + E  K+       NI+SW  +I+ YA
Sbjct: 390 GKQLHAHVLCVGL-EQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYA 448

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDE 433
             G S+EA++L  ++   GL PDS +  + L+AC + G + LG      + K+   C  +
Sbjct: 449 EHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSK 508

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGN---SLEAINLFHQ 489
                +ID+  + G  N A  + + +  Q+  V+W++++     +G+      A     Q
Sbjct: 509 DHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ 568

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           +  NC     VT +T     +  G+ ++   V   + S GV K+
Sbjct: 569 LDPNC----AVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKE 608



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 99/192 (51%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHAH++  GL      +  ++  Y++   L  +  VF      D   W+ +I  Y    
Sbjct: 291 QLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGG 350

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE+      M RE    + F + SVL  C ++  L  G+++H  ++  G +++ ++Q+
Sbjct: 351 CGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQS 410

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G + +A K+FD+    ++VSW+++I  Y ++    E + +F  + + G+ P
Sbjct: 411 ALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRP 470

Query: 195 DFVTMLSLAEAC 206
           D VT +++  AC
Sbjct: 471 DSVTFIAVLAAC 482


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/806 (29%), Positives = 401/806 (49%), Gaps = 76/806 (9%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F+ C   R      + HAH++++G       S  L++ Y   G+L  +  +FD     D
Sbjct: 55  VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRD 114

Query: 60  SFMWAVLIKCYM----------------------WNNFFE---------ESILLYHKMIR 88
              W  +I  Y                       WN+            ES+ ++ +M R
Sbjct: 115 VVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGR 174

Query: 89  EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
                 N  +  +L+ CS L +   G ++HG  ++ G+D D V  +++L  Y +   LD+
Sbjct: 175 SGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDE 234

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           +  VF  M  ++ +SWS+IIA    N  +  GLKMF  M + GV        S+ ++C  
Sbjct: 235 SFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCAT 294

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           L  LR    +H H L+     DG +  + + MY+KC ++  A+R F   E     S+ AM
Sbjct: 295 LPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAM 354

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I+ Y++     +AL  F K+ +     + I+L   L +CA +  L EG  +H      G+
Sbjct: 355 ITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLH------GL 408

Query: 329 GPEYDY-----LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
             + ++     +  A I+ Y +C  + E  +V   +G ++ +SWN +I+ + +     + 
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKT 468

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDM 442
           L +LV M   G+ PD ++  S L AC    SL  G++IH  ++K+    + ++ SSL+DM
Sbjct: 469 LNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDM 527

Query: 443 YSKCGFKNLAYLLFERI---------------------------QQKSVVMWNSMICGFY 475
           YSKCG  + A  +  +I                            Q+ +V WN++I G+ 
Sbjct: 528 YSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYV 587

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
               S +A   F++M    +  D+ T+ T +  C+N+  +  GK +H  +I   ++ D+Y
Sbjct: 588 MRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVY 647

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           I + L DMY+KCG+L  ++ +F+    R+ V+W+AMI  Y  HG   +A  LF+ M+   
Sbjct: 648 ICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMN 707

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGA 654
           I PN  TF+++L AC+H G VE G  YF+ M+  +G++P L+HY+ MVD+L +SG++E A
Sbjct: 708 IMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKA 767

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHK-RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
            ++I  MPF A+  IW  LL+ C+I++  ++  +     L      D+  Y LLSNIYA+
Sbjct: 768 LELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYAD 827

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYS 739
            G WD+  ++R+ M    LKK PG S
Sbjct: 828 AGMWDKASELRTAMRSDKLKKEPGCS 853



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 170/656 (25%), Positives = 301/656 (45%), Gaps = 72/656 (10%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           +   +++NF +  V + C+       G++ H  +I  GF     +   +L  Y   G L 
Sbjct: 44  KPATSVANFSF--VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLG 101

Query: 148 DARKVFDKMT-------------------------------SRDVVSWSSIIASYFDNAD 176
            A K+FD M                                +RDVVSW+S+++ +    +
Sbjct: 102 YATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGE 161

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E +K+F  M R GVE D  +   + + C  L + +    IHG  LR     D   G++
Sbjct: 162 NLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSA 221

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY+KC  L  +   F  + ++   SW+A+I+   ++ +    L+ F +M +V    +
Sbjct: 222 LLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVS 281

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
                +VL SCA L  LR G  +H   ++     +   +  A ++ YA+C  M + +++ 
Sbjct: 282 QSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKD-GIVRTATLDMYAKCNNMQDAQRLF 340

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
                 N+ S+N +I+ Y++K     AL L  ++    L  D  S++ +L AC  V  L 
Sbjct: 341 DMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLS 400

Query: 417 LGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            GLQ+HG   K +  ++  V ++ IDMY KC   + A  +F+ + +K  V WN++I    
Sbjct: 401 EGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHE 460

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           QN    + +N+   M  + +E DE TF + ++AC+    L  G  +H  ++  G+  + Y
Sbjct: 461 QNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPY 519

Query: 536 IDTALTDMYAKCGDLQTAQRVF---------------------------DSMSERNVVSW 568
           I ++L DMY+KCG +  A+++                            D   +  +VSW
Sbjct: 520 IGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSW 579

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +A+I  Y M  Q  DA   F +M++ GI P++ T+  +L  C++  S+  GK     +  
Sbjct: 580 NAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGK----QIHA 635

Query: 629 FGVEPDLQH--YAC--MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
             ++ +LQ+  Y C  +VD+ S+ G++  +  M    P   +   W A++ G   H
Sbjct: 636 HVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPI-RDFVTWNAMICGYAHH 690


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/622 (33%), Positives = 340/622 (54%), Gaps = 12/622 (1%)

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
           C    D V++   L    + G L DA  +FD+M  ++VV+W+S+++ Y  N      L M
Sbjct: 42  CAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAM 101

Query: 184 FHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           F  MV  GV P DF    +L  AC +L +LR    +H   +R     D  +G+  I MYS
Sbjct: 102 FADMVESGVAPNDFACNAALV-ACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYS 160

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           +CG L +A+  F +++      +T++IS + R+G F+ A E+ ++ML+   +PN  T+ T
Sbjct: 161 RCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTT 220

Query: 303 VLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +L +C  +     G+ +H  +I+K G+  +  Y   ALI+FY+  G+    + V  ++  
Sbjct: 221 ILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHC 276

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           +N++SW  ++  Y R G  +EAL++   M + G+ P+ F+++  L ACG++G   LG Q+
Sbjct: 277 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQL 333

Query: 422 HGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H   IK D   D  V ++L+ MY + G       +  +I+   +V W + I   +QNG  
Sbjct: 334 HCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFG 393

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +AI L  QM+      +   F + + +C+++  L++G   H   +  G   +I    AL
Sbjct: 394 EKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNAL 453

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            +MY+KCG + +A+  FD M   +V SW+++I  +  HG  N A  +F +M  +GIKP++
Sbjct: 454 INMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 513

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
            TF+ +L  C+HSG VEEG+ +F  M   +   P   HYACM+D+L R+G  + A +MI+
Sbjct: 514 STFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIN 573

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MPF  +  IW  LL  C++H+ +D+ K     L      D+  Y L+SNIYA  G W++
Sbjct: 574 DMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWED 633

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             KVR  M+ TG+KK  G S I
Sbjct: 634 ARKVRRRMDETGVKKDAGCSWI 655



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 297/607 (48%), Gaps = 53/607 (8%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
            RL++S    G L  +  +FD     +   W  ++  Y  N   E ++ ++  M+     
Sbjct: 56  NRLVKS----GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVA 111

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
            ++F   + L AC+ LG L +GE+VH   ++ GF  D  I + ++  Y   G L  A++V
Sbjct: 112 PNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEV 171

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD+M S DVV ++S+I+++  N +     +    M+++G++P+  TM ++  AC  +   
Sbjct: 172 FDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL-- 229

Query: 213 RPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
              + IHG+++ +KI +         + I  YS+ G+   A+  F  +  +   SW +M+
Sbjct: 230 --GQQIHGYLI-KKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMM 286

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
             Y R G  ++AL+ F  M+    +PN   L  VLG+C  +G    G+ +HC  I+  + 
Sbjct: 287 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLI 343

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   +  AL+  Y   G + E E +++ I   +++SW   IS   + G  ++A+ LL Q
Sbjct: 344 TDI-RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQ 402

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGF 448
           M + G  P+ ++ +S LS+C +V SL  G+Q H   +K+ C  E    ++LI+MYSKCG 
Sbjct: 403 MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQ 462

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A L F+ +    V  WNS+I G  Q+G++ +A+ +F +M  N ++ D+ TFL  +  
Sbjct: 463 MGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMG 522

Query: 509 CSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM------- 560
           C++ G +E+G+     +I  Y           + DM  + G    A R+ + M       
Sbjct: 523 CNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDAL 582

Query: 561 ----------------------------SERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
                                       S+R+  S+  M + Y MHG+  DA  + ++M 
Sbjct: 583 IWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMD 642

Query: 593 DSGIKPN 599
           ++G+K +
Sbjct: 643 ETGVKKD 649



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 166/349 (47%), Gaps = 16/349 (4%)

Query: 31  ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           +ST LI+ Y+  G  + ++ VFD+    +   W  +++ Y+ +   EE++ ++  MI E 
Sbjct: 250 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 309

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
              + F    VL AC   G +G G ++H   IK     D  +  ++L  YG  G +++  
Sbjct: 310 VDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 366

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            + +K+ + D+VSW++ I++ F N    + + +   M  EG  P+     S+  +C ++ 
Sbjct: 367 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 426

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           SL      H   L+     +   GN+ I MYSKCG + SA   F  +     TSW ++I 
Sbjct: 427 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 486

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            + + G   KALE F KM     +P+  T + VL  C   G + EG     ++  + M  
Sbjct: 487 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG-----ELFFRLMID 541

Query: 331 EYDYLGPA------LIEFYAECGKMSECEKVIHAIG-ERNILSWNMLIS 372
           +Y +  PA      +I+     G+  E  ++I+ +  E + L W  L++
Sbjct: 542 QYSFT-PAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 589



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 155/393 (39%), Gaps = 43/393 (10%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           +C ++    +LH   +   L  D   S  L+  Y   G +     + +  + PD   W  
Sbjct: 323 ACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTT 382

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
            I     N F E++I L  +M  E  T + + + SVL +C+ +  L  G + H   +K G
Sbjct: 383 AISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG 442

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D +     +++  Y + G +  AR  FD M + DV SW+S+I  +  + D ++ L++F 
Sbjct: 443 CDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFS 502

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G++PD  T L +   C     +       G +  R                    
Sbjct: 503 KMRSNGIKPDDSTFLGVLMGCNHSGMVE-----EGELFFR-------------------- 537

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L+  + +F        + +  MI    R+G F +AL     M     EP+ +   T+L 
Sbjct: 538 -LMIDQYSFTP----APSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLA 589

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI- 364
           SC     L  GK    +++         Y+   +   YA  G+  +  KV   + E  + 
Sbjct: 590 SCKLHRNLDIGKLAADRLMELSDRDSASYV--LMSNIYAMHGEWEDARKVRRRMDETGVK 647

Query: 365 ----LSW---NMLISEYARKGMSKEALELLVQM 390
                SW   N  +  +A + MS    + + QM
Sbjct: 648 KDAGCSWIEINNEVHTFASRDMSHPNSDSIYQM 680


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/737 (31%), Positives = 376/737 (51%), Gaps = 29/737 (3%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D  +  ++I  YA+  ++  +   F+     D   W  ++  Y+ N    +SI ++  M 
Sbjct: 71  DVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMG 130

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R         +  +L+ CS L D   G ++HG +++ G D D V  +++L  Y +     
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFV 190

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLSLAEA 205
           ++ +VF  +  ++ VSWS+IIA    N  +S  LK F  M  V  GV        S+  +
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA--SVLRS 248

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C  L  LR    +H H L+     DG +  + + MY+KC ++  A+  F K E     S+
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSY 308

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            AMI+ Y++     KAL  F +++      + I+L  V  +CA +  L EG  ++   I+
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIK 368

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
             +  +   +  A I+ Y +C  ++E  +V   +  R+ +SWN +I+ + + G   E L 
Sbjct: 369 SSLSLDV-CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 427

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYS 444
           L V M    + PD F+  S L AC   GSL  G++IH  ++K     +  V  SLIDMYS
Sbjct: 428 LFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 445 KCGFKNLAYLLFERIQQKS--------------------VVMWNSMICGFYQNGNSLEAI 484
           KCG    A  +  R  Q++                     V WNS+I G+     S +A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF +M    +  D+ T+ T +  C+N+     GK +H ++I   ++ D+YI + L DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMY 606

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           +KCGDL  ++ +F+    R+ V+W+AMI  Y  HG+  +A  LF++M+   IKPN VTF+
Sbjct: 607 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 666

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           +IL AC+H G +++G  YF  M R +G++P L HY+ MVD+L +SG ++ A ++I  MPF
Sbjct: 667 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 726

Query: 664 PANGSIWGALLNGCRIHK-RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
            A+  IW  LL  C IH+  ++V +     L      D+  YTLLSN+YA+ G W++   
Sbjct: 727 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 786

Query: 723 VRSIMEVTGLKKVPGYS 739
           +R  M    LKK PG S
Sbjct: 787 LRRNMRGFKLKKEPGCS 803



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/587 (29%), Positives = 307/587 (52%), Gaps = 25/587 (4%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++  G   D  A++ L++ YA+      S  VF    E +S  W+ +I   + NN
Sbjct: 159 QIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 218

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
               ++  + +M +  A +S  IY SVLR+C++L +L  G ++H   +K  F  D +++T
Sbjct: 219 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 278

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  Y +   + DA+ +FDK  + +  S++++I  Y       + L +FH ++  G+  
Sbjct: 279 ATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 338

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D +++  +  AC  +  L     I+   ++  + +D  + N+ I MY KC  L  A R F
Sbjct: 339 DEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 398

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R   SW A+I+ + ++G   + L  FV ML  + EP+  T  +VL +C G G L 
Sbjct: 399 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLG 457

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN----------- 363
            G  +H  I++ GM      +G +LI+ Y++CG + E EK+     +R            
Sbjct: 458 YGMEIHSSIVKSGMASN-SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEK 516

Query: 364 ---------ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                     +SWN +IS Y  K  S++A  L  +M   G+ PD F+ A+ L  C N+ S
Sbjct: 517 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 576

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
             LG QIH  VIK + + D ++ S+L+DMYSKCG  + + L+FE+  ++  V WN+MICG
Sbjct: 577 AGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 636

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRK 532
           +  +G   EAI LF +M L  ++ + VTF++ ++AC+++G ++KG ++ +     YG+  
Sbjct: 637 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 696

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
            +   + + D+  K G ++ A  +   M  E + V W  ++    +H
Sbjct: 697 QLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 743



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 289/630 (45%), Gaps = 55/630 (8%)

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT------- 157
           C+  G L  G++ H  +I  GF     +   +L  Y        A  VFD+M        
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 158 ------------------------SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
                                    RDVVSW+S+++ Y  N +  + +++F  M R G E
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D  T   + + C  L        IHG V+R     D    ++ + MY+K    + + R 
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I ++ + SW+A+I+   ++     AL+ F +M +V    +     +VL SCA L  L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           R G  +H   ++     +   +  A ++ YA+C  M + + +       N  S+N +I+ 
Sbjct: 256 RLGGQLHAHALKSDFAAD-GIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           Y+++    +AL L  ++ + GL  D  S++    AC  V  L  GLQI+   IK     D
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLD 374

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V ++ IDMY KC     A+ +F+ ++++  V WN++I    QNG   E + LF  M  
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           + +E DE TF + ++AC+  G L  G  +H  ++  G+  +  +  +L DMY+KCG ++ 
Sbjct: 435 SRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 493

Query: 553 AQRVFDSMSER-NV-------------------VSWSAMIDCYGMHGQLNDAASLFKQML 592
           A+++     +R NV                   VSW+++I  Y M  Q  DA  LF +M+
Sbjct: 494 AEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 553

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
           + GI P++ T+  +L  C++  S   GK     +    ++ D+   + +VD+ S+ GD+ 
Sbjct: 554 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLH 613

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
            + +++       +   W A++ G   H +
Sbjct: 614 DS-RLMFEKSLRRDFVTWNAMICGYAHHGK 642



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 266/560 (47%), Gaps = 34/560 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC  L +L    +LHAH L +    D    T  ++ YA+  +++ ++++FD  +  +
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLN 304

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              +  +I  Y       +++LL+H+++             V RAC+ +  L  G +++ 
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYD 364

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK     D  +  + +  YG+   L +A +VFD+M  RD VSW++IIA++  N    E
Sbjct: 365 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 424

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F SM+R  +EPD  T  S+ +AC    SL     IH  +++  +  +  +G S I 
Sbjct: 425 TLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLID 483

Query: 240 MYSKCGDLLSAERTFVKIEKRCT--------------------TSWTAMISCYNRSGWFQ 279
           MYSKCG +  AE+   +  +R                       SW ++IS Y      +
Sbjct: 484 MYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 543

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
            A   F +M+E+   P+  T  TVL +CA L     GK +H Q+I+K +  +  Y+   L
Sbjct: 544 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV-YISSTL 602

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           ++ Y++CG + +   +      R+ ++WN +I  YA  G  +EA++L  +M    + P+ 
Sbjct: 603 VDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 662

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQ-SSLIDMYSKCG-FKNLAYLL 455
            +  S L AC ++G +  GL+ + +++K D     +    S+++D+  K G  K    L+
Sbjct: 663 VTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 721

Query: 456 FERIQQKSVVMWNSM--ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            E   +   V+W ++  +C  ++N   +        + L+  +    T L+ + A  + G
Sbjct: 722 REMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYA--DAG 779

Query: 514 QLEKGKWVHHKLISYGVRKD 533
             EK   +   +  + ++K+
Sbjct: 780 MWEKVSDLRRNMRGFKLKKE 799


>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
          Length = 916

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/734 (32%), Positives = 383/734 (52%), Gaps = 12/734 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H   L   L  D      L++ YA+ G   SS +VF      D+  W  ++   ++N  
Sbjct: 186 FHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGL 245

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-GEKVHGRIIKCGF-DKDDVIQ 133
            E S   + +M+R            VL ACS L DL S GE VH  +IK G+ D    + 
Sbjct: 246 AEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVA 305

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            S++  Y E G  + A +VF   +++++V+W+++I    +N  V+E + MF  M R   +
Sbjct: 306 NSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM-RSKNQ 364

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAER 252
           PD  T++++  ACG+   L   + +HG+++++  I  +  +GNS + +Y KC D  +A  
Sbjct: 365 PDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARI 424

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWF-QKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
            F  +  R   SW  MIS Y+R+    ++A   F  +L       L T++ V+ SC    
Sbjct: 425 LFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQ 484

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNML 370
            L  GKSVH  I++ G          +LI  Y  CG       ++ +I    +I+SWN  
Sbjct: 485 DLNFGKSVHSFILKYGFLTGVSA-ANSLIHMYICCGDSLAAFSLLESITPISDIISWNTA 543

Query: 371 ISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           I    + G+  +ALE    M  T  L PDS ++ S LS CGN+    LG  IH   +K  
Sbjct: 544 IVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRL 603

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            +    V+++L+ MY + G    A L+F  +  +++  WN MI GF QN   L A   + 
Sbjct: 604 IEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYK 663

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M     E +E++ +  I AC+ +G L +GK +H  ++ +G++ +++I  +L DMY+KCG
Sbjct: 664 KM--EDFEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCG 721

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  + RVF+S +E+++  W++MI  +G HG    +  +F +M +SG+K    TF+ +L 
Sbjct: 722 RLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLS 781

Query: 609 ACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSHSG  +EG K+Y   +  FG+ P  +H+ C+VD+L R+G ++ A K + S+P     
Sbjct: 782 ACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAH 841

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            +WGALL+ C     + + +++ K L      ++GYY  +SN+YA +  W    +VR I+
Sbjct: 842 GVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDIL 901

Query: 728 EVTGLKKVPGYSTI 741
           +  GL K  G S I
Sbjct: 902 QDKGLMKPRGRSII 915



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 183/675 (27%), Positives = 318/675 (47%), Gaps = 18/675 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   L +G   DPP  T +I +Y+ +  + S+  VFD    PD  +W   I     N  
Sbjct: 85  LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           + ++++L+  M+     I +     +L   S    L  G   HG  +K   D D  +  +
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNT 204

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G    +  VF +M  RD  SW+S+++    N         F  MVR   + D
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264

Query: 196 FVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIK-IDGPLGNSFIVMYSKCGDLLSAERT 253
            V++  +  AC  L  L     S+H  V++   +     + NS I  Y + G   +AE  
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEV 324

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F+    +   +W AMI     +    +A+  F +M   K +P++ TL+T++ +C   G L
Sbjct: 325 FLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGDHGLL 383

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            EGK VH  II+KG   E   +G +L++ Y +C   S    +   +  R+++SWN +IS 
Sbjct: 384 PEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISG 443

Query: 374 YARK-GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CK 431
           Y+R   + +EA  +   + + GL     +V + + +C     L  G  +H  ++K     
Sbjct: 444 YSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLT 503

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQN---GNSLEAINLF 487
                +SLI MY  CG    A+ L E I   S ++ WN+ I G  QN   G++LEA    
Sbjct: 504 GVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFM 563

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
           H      L  D +T ++ +  C N+     GK +H   +   +  ++ +  AL  MY + 
Sbjct: 564 HSTL--TLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRF 621

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           GD ++A+ +F S+  RN+ SW+ MI  +  + +   A   +K+M D   +PNE++ + I+
Sbjct: 622 GDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMED--FEPNEISIVGII 679

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+  G + +GK     +  FG++ ++   A +VD+ S+ G ++ + ++  S    A  
Sbjct: 680 CACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFES---SAEK 736

Query: 668 SI--WGALLNGCRIH 680
           SI  W ++++    H
Sbjct: 737 SIACWNSMISAFGFH 751



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 219/466 (46%), Gaps = 7/466 (1%)

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           ++H   L+    +D P+  S I  YS+  D+ SA + F +        W A IS    + 
Sbjct: 84  ALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNC 143

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            +  A+  F  M++V    +  +++ +L   +    L  G + H   +++ +  +   L 
Sbjct: 144 RYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLS-LW 202

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
             L++ YA+CG     E V   +  R+  SWN ++S     G+++ +     +M      
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 397 PDSFSVASSLSACGNVGSL-QLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAY 453
            D  S++  LSAC ++  L   G  +H  VIK+  +D    V +SLI  Y + GF   A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAE 322

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F     K++V WN+MI G  +N    EA+ +F +M     + D  T +T I AC + G
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHG 381

Query: 514 QLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
            L +GK VH  +I  G + ++  +  +L D+Y KC D  TA+ +F +M  R+++SW+ MI
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441

Query: 573 DCYGMHGQL-NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
             Y  +  L  +A ++FK +L  G+     T + ++ +C     +  GK   + +  +G 
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGF 501

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
              +     ++ +    GD   AF ++ S+   ++   W   + GC
Sbjct: 502 LTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGC 547



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 6   SCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +CT   +LR+   +H H++  GL  +   S  L++ Y++ G L  S  VF++  E     
Sbjct: 681 ACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIAC 740

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           W  +I  + ++    +SI ++ KM     +AT S FI  ++L ACS  G    G K +  
Sbjct: 741 WNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFI--ALLSACSHSGLTDEGLKYYHL 798

Query: 121 IIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYFDNADVS 178
           +I+  G          ++   G  G L +A K  + + S+     W +++++    ++  
Sbjct: 799 MIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSE-- 856

Query: 179 EGLKMFHSMVRE--GVEPD----FVTMLSL 202
             LKM  S+ +    +EP+    +VTM +L
Sbjct: 857 --LKMCESVAKHLLCLEPENSGYYVTMSNL 884


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/681 (32%), Positives = 358/681 (52%), Gaps = 46/681 (6%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC---LDDARKVFDKMTS 158
           LR C +L  L   +++H +I K G D+     T ++    E      LD ARK F+ +  
Sbjct: 32  LRCCKTLNQL---KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFE-LFK 87

Query: 159 RDVVS------WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
            DV S       +S+I  Y       E + ++  M+  GV P+  T   +   C ++ + 
Sbjct: 88  EDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAF 147

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                +HG V++  ++ D  + N  I  Y++CG +    + F  + +R   SWT++I  Y
Sbjct: 148 CEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGY 207

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            R    ++A+  F +M+E    P+ +T++ V+ +CA L  L  G+ V   I   G+    
Sbjct: 208 ARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLN- 266

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             +  AL++ Y +CG +   +++     +RN++ +N ++S YAR+G+++EAL +L +M  
Sbjct: 267 KVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ 326

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNL 451
            G  PD  ++ S++SA   +  L  G   HG+VI+   +  + + + +IDMY KCG   +
Sbjct: 327 QGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEM 386

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNG--------------------NSL---------- 481
           A  +F+ +  K+VV WNS+  GF +NG                    N++          
Sbjct: 387 ACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLF 446

Query: 482 -EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +AI LF +M    ++ D VT +    AC  +G  E  KWVH  +   G+  D+ ++TAL
Sbjct: 447 EDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTAL 506

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DM+A+CGD Q+A +VF+ M+ER+V +W+A I    M G    A  LF QML  G+KP+ 
Sbjct: 507 VDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDV 566

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           V F+ +L ACSH G VE+G   F+ M   G+ P ++HY CMVDLL R+G +  AF +I S
Sbjct: 567 VLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKS 626

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MP   N  +WG+LL  CR+HK +++     + ++       G + LLSNIYA  G W + 
Sbjct: 627 MPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDV 686

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
            +VR  +   G++KVPG S++
Sbjct: 687 ARVRLNLREKGVRKVPGSSSV 707



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 180/617 (29%), Positives = 308/617 (49%), Gaps = 44/617 (7%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRS---SRLVFDTFKEP-- 58
            R C  L +L +LH  +   GL   P   T+L+ + AE+ S  S   +R  F+ FKE   
Sbjct: 32  LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91

Query: 59  --DS-FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
             D+ FM   LI+ Y       E+ILLY +M+    T +++ +P VL  C+ +     G 
Sbjct: 92  SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGI 151

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VHG ++K G ++D  IQ  ++  Y E G +D   KVF+ M+ R+VVSW+S+I  Y    
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E + +F  MV  G+ P  VTM+ +  AC +L  L     +  ++    +K++  + N
Sbjct: 212 RPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN 271

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY KCG + +A+R F +   R    +  ++S Y R G  ++AL    +ML+    P
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 331

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK------- 348
           + +T+++ + + A L  L  GK  H  +IR G+   +D +G  +I+ Y +CGK       
Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYVIRNGL-EGWDSIGNVIIDMYMKCGKPEMACRV 390

Query: 349 ------------------------MSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
                                   +    +V + I ERN + WN +IS   +K + ++A+
Sbjct: 391 FDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAI 450

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDM 442
           EL  +MQ  G+  D  ++    SACG +G+ +L   +H ++ K  I C D  + ++L+DM
Sbjct: 451 ELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPC-DMRLNTALVDM 509

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           +++CG    A  +F ++ ++ V  W + I      GN   A  LF+QM +  ++ D V F
Sbjct: 510 FARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLF 569

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS- 561
           +  + ACS+ GQ+E+G  +   +  +G+   I     + D+  + G L+ A  +  SM  
Sbjct: 570 VQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPM 629

Query: 562 ERNVVSWSAMIDCYGMH 578
           E N V W +++    +H
Sbjct: 630 EPNDVVWGSLLAACRVH 646


>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
 gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
          Length = 921

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/723 (30%), Positives = 378/723 (52%), Gaps = 21/723 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C+ L  L    R+HA +   G+      ST LI+ Y + G    +  VF++ ++ D
Sbjct: 207 VLTACSTLGDLETGMRIHALIRSKGVE-SAMVSTGLIDLYGKWGFFEDALQVFESVRDRD 265

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             +W   I   +++     ++ L+ KM  E    +N  +  +L ACS+L D  +G+ +  
Sbjct: 266 VVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIED 325

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI   G + DDV+Q  IL  +   G L   R++FD+M  R VV+W+++IA+Y       E
Sbjct: 326 RIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSME 385

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+++H M    +EPD + + ++ +AC  L +L   R++H  +  R  +    +    + 
Sbjct: 386 ALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVD 442

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCGDL  A RTF   + R   SWT++I+ Y+   + ++ALE F  M     EPN IT
Sbjct: 443 MYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSIT 502

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             TV+ +C+ L  L  G+++H +++  G   + +++G AL+  Y++ G++     V  +I
Sbjct: 503 FCTVIDACSRLSSLLPGRALHSRVVATGHISD-EFVGNALVSMYSKFGRVDFARVVFDSI 561

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             +   SW +++    + G S EALE+  ++   G  P S   +++L +C  +  +    
Sbjct: 562 PVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRAR 621

Query: 420 QIHGHVIKIDCKDEFVQSS-LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IHG +   D   + V S+ L+++Y+KCG    A L+F+++ +K+ V W +MI G+ QNG
Sbjct: 622 AIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNG 681

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA+ L+  M +   + + + F+  I +C+++G L +G+ VH +L   G++ +  I T
Sbjct: 682 RPAEALELYKAMDV---QPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVT 738

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL +MYAKCG L  A+  FDS    +  +W++M   Y   G  +    L+++M   G++P
Sbjct: 739 ALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQP 798

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N +T +++L ACSH G +EE +  F  M    G+ P  +HY+CM DLL RSG +E A K+
Sbjct: 799 NGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKV 858

Query: 658 IH--------SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
           +             P   S W + L  C+ H          ++L      D+  Y LLS 
Sbjct: 859 VKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQ 918

Query: 710 IYA 712
            Y+
Sbjct: 919 TYS 921



 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 185/602 (30%), Positives = 315/602 (52%), Gaps = 15/602 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  VL AC+ L D+  G+KVH RI +     D V+Q ++L  Y + G L+++R++F+ M 
Sbjct: 2   FACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAME 61

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R V +W+++I +Y  +    E L+ F  M      P  +T  S+  AC     L   ++
Sbjct: 62  RRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGKA 118

Query: 218 IHGHV--LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           IH  +     +I+ D  L NS + MY KCG L  AER F  I ++   SWTAMI+ Y ++
Sbjct: 119 IHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQN 178

Query: 276 GWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           G+ ++A+E F  M+ E + EP+ IT   VL +C+ LG L  G  +H  I  KG+  E   
Sbjct: 179 GYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGV--ESAM 236

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +   LI+ Y + G   +  +V  ++ +R+++ W   I+     G S  ALEL  +M+  G
Sbjct: 237 VSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEG 296

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           L  ++ + +  L+AC N+   + G  I   +  +  + D+ +Q  ++ ++++CG      
Sbjct: 297 LQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTR 356

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F+R+  ++VV W +MI  + Q G S+EA+ L+H M    +E D++     +QACS + 
Sbjct: 357 EMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVLQACSRLK 413

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LE+G+ VH ++ S      + + T L DMY KCGDL  A+R FD    R+V+SW+++I 
Sbjct: 414 NLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLIT 473

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y       +A  +F  M   G++PN +TF  ++ ACS   S+  G+   + +   G   
Sbjct: 474 AYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHIS 533

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMP---FPANGSIWGALLNGCRIHKRIDVMKTIE 690
           D      +V + S+ G ++ A  +  S+P   +P+   +  AL      H+ +++   I 
Sbjct: 534 DEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIH 593

Query: 691 KE 692
            E
Sbjct: 594 LE 595



 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 186/682 (27%), Positives = 329/682 (48%), Gaps = 18/682 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C  L+ + R   +H  +  +    D      L+  YA+ G L  SR +F+  +   
Sbjct: 5   VLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRT 64

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ ++FF+E++  + +M    A  S+  + SVL AC S  DL +G+ +H 
Sbjct: 65  VATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGKAIHR 121

Query: 120 RIIKCG--FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           +I         D+++Q S++  YG+ G L+DA +VF  +  ++  SW+++I +Y  N   
Sbjct: 122 QIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYE 181

Query: 178 SEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
              +++F  M+ EG VEPD +T   +  AC  L  L     IH  ++R K      +   
Sbjct: 182 RRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHA-LIRSKGVESAMVSTG 240

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I +Y K G    A + F  +  R    WTA I+     G    ALE F KM     + N
Sbjct: 241 LIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQAN 300

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKV 355
            +T   +L +C+ L     GK++  +I   G+  EYD  L   ++  +A CG +    ++
Sbjct: 301 NVTFSKILAACSNLEDFETGKTIEDRIYTLGL--EYDDVLQDGILSLHARCGSLVGTREM 358

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  R +++W  +I+ Y ++G S EALEL   M    + PD  ++++ L AC  + +L
Sbjct: 359 FDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVLQACSRLKNL 415

Query: 416 QLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G  +H  +   D +    VQ+ L+DMY KCG    A   F+  + + V+ W S+I  +
Sbjct: 416 EQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAY 475

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
                  EA+ +FH M L  +E + +TF T I ACS +  L  G+ +H ++++ G   D 
Sbjct: 476 SHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDE 535

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           ++  AL  MY+K G +  A+ VFDS+  +   SW  M+     +G  ++A  ++ ++   
Sbjct: 536 FVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLE 595

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           G +P    F   L +C+    V   +     ++     PDL     ++++ ++ G++E A
Sbjct: 596 GFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEA 655

Query: 655 FKMIHSMPFPANGSIWGALLNG 676
            +++       N   W  ++ G
Sbjct: 656 -RLVFDQMTEKNEVSWTTMIGG 676



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 247/482 (51%), Gaps = 11/482 (2%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T   +  AC  L  +   + +H  +     ++D  L N+ + +Y+KCGDL  + R F  +
Sbjct: 1   TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
           E+R   +W  MI+ Y +  +FQ+ALE+F +M      P+ IT  +VLG+C     L  GK
Sbjct: 61  ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGK 117

Query: 318 SVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           ++H QI       + D  L  +L+  Y +CG + + E+V H I  +N  SW  +I+ YA+
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177

Query: 377 KGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
            G  + A+E+   M + G + PD  + A  L+AC  +G L+ G++IH  +     +   V
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAMV 237

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            + LID+Y K GF   A  +FE ++ + VV+W + I     +G S  A+ LF +M    L
Sbjct: 238 STGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGL 297

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + + VTF   + ACSN+   E GK +  ++ + G+  D  +   +  ++A+CG L   + 
Sbjct: 298 QANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTRE 357

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +FD M  R VV+W+ MI  Y   G   +A  L+  M    I+P+++   N+L ACS   +
Sbjct: 358 MFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKN 414

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI-WGALL 674
           +E+G+   + +     EP L     +VD+  + GD+  A +      F A   I W +L+
Sbjct: 415 LEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDG--FKARDVISWTSLI 472

Query: 675 NG 676
             
Sbjct: 473 TA 474


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/604 (35%), Positives = 332/604 (54%), Gaps = 6/604 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L  AR+VFD++ + D  +++++I +Y         + ++ SM+R  V P+  T   + 
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +AC  L  LR  R+IH H     +  D  +  + I +Y +C     A   F K+  R   
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           +W AM++ Y   G +  A+   + M +     PN  TL+++L   A  G L +G S+H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 323 IIRKGM--GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            +R  +    E   +G AL++ YA+C ++    +V H +  RN ++W+ LI  +      
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 381 KEALELLVQMQTWGL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS-S 438
            EA  L   M   GL    + SVAS+L  C ++  L +G Q+H  + K     +   S S
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+ MY+K G  N A + F+ I  K  + + +++ G  QNG + EA  +F +M    +E D
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
             T ++ I ACS++  L+ GK  H  +I  G+  +  I  +L DMYAKCG +  +++VFD
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M  R+VVSW+ MI  YG+HG   +A +LF  M + G  P++VTF+ ++ ACSHSG V E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527

Query: 619 GKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           GK +F+ M   +G+ P ++HY CMVDLL+R G ++ A++ I SMP  A+  +WGALL  C
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           RIHK ID+ K + + +   G    G + LLSNI++  G +DE  +VR I +V G KK PG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647

Query: 738 YSTI 741
           YS I
Sbjct: 648 YSWI 651



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 165/557 (29%), Positives = 275/557 (49%), Gaps = 13/557 (2%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN 95
           +E +   G L  +R VFD    PD+  +  LI+ Y W   F  +I LY  M+R +   + 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           + +P VL+ACS+L DL +G  +H      G   D  + T+++  Y        AR VF K
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRP 214
           M  RDVV+W++++A Y ++      +     M    G+ P+  T++SL     +  +L  
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 215 ARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
             SIH + LR  ++ +     +G + + MY+KC  L+ A R F  +  R   +W+A+I  
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 272 YNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           +       +A   F  ML E     +  ++ + L  CA L  L  G  +H  I + G+  
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +      +L+  YA+ G ++E       I  ++ +S+  L+S   + G ++EA  +  +M
Sbjct: 341 DLTA-SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFK 449
           Q   + PD  ++ S + AC ++ +LQ G   HG VI      E  + +SLIDMY+KCG  
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           +L+  +F+++  + VV WN+MI G+  +G   EA  LF  M       D+VTF+  I AC
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC 519

Query: 510 SNIGQLEKGK-WVHHKLISYGV--RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNV 565
           S+ G + +GK W       YG+  R + YI   + D+ A+ G L  A +   SM  + +V
Sbjct: 520 SHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 566 VSWSAMIDCYGMHGQLN 582
             W A++    +H  ++
Sbjct: 578 RVWGALLGACRIHKNID 594



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 235/495 (47%), Gaps = 28/495 (5%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+   +LR    +HAH    GLH D   ST LI+ Y        +R VF      D
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 60  SFMWAVLIKCYMWNNFFEESI-----LLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
              W  ++  Y  +  +  +I     +  H  +R  A+       S+L   +  G L  G
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS----TLVSLLPLLAQHGALFQG 221

Query: 115 EKVHGRIIKCGFDKDD---VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             +H   ++   ++++   +I T++L  Y +   L  A +VF  M  R+ V+WS++I  +
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA---CGELCSLRPARSIHGHVLRRKIK 228
                ++E   +F  M+ EG+   F++  S+A A   C  L  L     +H  + +  I 
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            D    NS + MY+K G +  A   F +I  + T S+ A++S   ++G  ++A   F KM
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                EP++ T+++++ +C+ L  L+ GK  H  +I +G+  E      +LI+ YA+CGK
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN-SLIDMYAKCGK 458

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +    +V   +  R+++SWN +I+ Y   G+ KEA  L + M+  G  PD  +    ++A
Sbjct: 459 IDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA 518

Query: 409 CGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-V 464
           C + G +  G        H   I  + E     ++D+ ++ G  + AY   + +  K+ V
Sbjct: 519 CSHSGLVTEGKHWFDTMTHKYGILPRMEHY-ICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 465 VMWNSMI--CGFYQN 477
            +W +++  C  ++N
Sbjct: 578 RVWGALLGACRIHKN 592



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 179/377 (47%), Gaps = 7/377 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPA---STRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL      L + T +HA+ L   L  +       T L++ YA+   L  +  VF     
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT-ISNFIYPSVLRACSSLGDLGSGEK 116
            +   W+ LI  ++  +   E+  L+  M+ E    +S     S LR C+SL DL  G +
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ 328

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  I K G   D     S+L  Y + G +++A   FD++  +D +S+ ++++    N  
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E   +F  M    +EPD  TM+SL  AC  L +L+  +  HG V+ R + ++  + NS
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS 448

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY+KCG +  + + F K+  R   SW  MI+ Y   G  ++A   F+ M      P+
Sbjct: 449 LIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPD 508

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKV 355
            +T I ++ +C+  G + EGK     +  K G+ P  ++    +++  A  G + E  + 
Sbjct: 509 DVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY-ICMVDLLARGGLLDEAYQF 567

Query: 356 IHAIG-ERNILSWNMLI 371
           I ++  + ++  W  L+
Sbjct: 568 IQSMPLKADVRVWGALL 584



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 131/276 (47%), Gaps = 5/276 (1%)

Query: 426 IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           I  + KD+      ++ +   G   LA  +F+RI       +N++I  +   G    AI+
Sbjct: 27  ISYEVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAID 86

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           L+  M    +  ++ TF   ++ACS +  L  G+ +H    + G+  D+++ TAL D+Y 
Sbjct: 87  LYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYI 146

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFM 604
           +C     A+ VF  M  R+VV+W+AM+  Y  HG  + A +    M D  G++PN  T +
Sbjct: 147 RCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLV 206

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY---ACMVDLLSRSGDIEGAFKMIHSM 661
           ++L   +  G++ +G           +E + +       ++D+ ++   +  A ++ H M
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM 266

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           P   N   W AL+ G  +  R+     + K++ V G
Sbjct: 267 PV-RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEG 301


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/604 (35%), Positives = 332/604 (54%), Gaps = 6/604 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L  AR+VFD++ + D  +++++I +Y         + ++ SM+R  V P+  T   + 
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +AC  L  LR  R+IH H     +  D  +  + I +Y +C     A   F K+  R   
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           +W AM++ Y   G +  A+   + M +     PN  TL+++L   A  G L +G S+H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 323 IIRKGM--GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            +R  +    E   +G AL++ YA+C ++    +V H +  RN ++W+ LI  +      
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 381 KEALELLVQMQTWGL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS-S 438
            EA  L   M   GL    + SVAS+L  C ++  L +G Q+H  + K     +   S S
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+ MY+K G  N A + F+ I  K  + + +++ G  QNG + EA  +F +M    +E D
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
             T ++ I ACS++  L+ GK  H  +I  G+  +  I  +L DMYAKCG +  +++VFD
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M  R+VVSW+ MI  YG+HG   +A +LF  M + G  P++VTF+ ++ ACSHSG V E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527

Query: 619 GKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           GK +F+ M   +G+ P ++HY CMVDLL+R G ++ A++ I SMP  A+  +WGALL  C
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           RIHK ID+ K + + +   G    G + LLSNI++  G +DE  +VR I +V G KK PG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647

Query: 738 YSTI 741
           YS I
Sbjct: 648 YSWI 651



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/557 (29%), Positives = 275/557 (49%), Gaps = 13/557 (2%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN 95
           +E +   G L  +R VFD    PD+  +  LI+ Y W   F  +I LY  M+R +   + 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           + +P VL+ACS+L DL +G  +H      G   D  + T+++  Y        AR VF K
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRP 214
           M  RDVV+W++++A Y ++      +     M    G+ P+  T++SL     +  +L  
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 215 ARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
             SIH + LR  ++ +     +G + + MY+KC  L+ A R F  +  R   +W+A+I  
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 272 YNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           +       +A   F  ML E     +  ++ + L  CA L  L  G  +H  I + G+  
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +      +L+  YA+ G ++E       I  ++ +S+  L+S   + G ++EA  +  +M
Sbjct: 341 DLT-ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFK 449
           Q   + PD  ++ S + AC ++ +LQ G   HG VI      E  + +SLIDMY+KCG  
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           +L+  +F+++  + VV WN+MI G+  +G   EA  LF  M       D+VTF+  I AC
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC 519

Query: 510 SNIGQLEKGK-WVHHKLISYGV--RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNV 565
           S+ G + +GK W       YG+  R + YI   + D+ A+ G L  A +   SM  + +V
Sbjct: 520 SHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 566 VSWSAMIDCYGMHGQLN 582
             W A++    +H  ++
Sbjct: 578 RVWGALLGACRIHKNID 594



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 235/495 (47%), Gaps = 28/495 (5%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+   +LR    +HAH    GLH D   ST LI+ Y        +R VF      D
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 60  SFMWAVLIKCYMWNNFFEESI-----LLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
              W  ++  Y  +  +  +I     +  H  +R  A+       S+L   +  G L  G
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS----TLVSLLPLLAQHGALFQG 221

Query: 115 EKVHGRIIKCGFDKDD---VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             +H   ++   ++++   +I T++L  Y +   L  A +VF  M  R+ V+WS++I  +
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA---CGELCSLRPARSIHGHVLRRKIK 228
                ++E   +F  M+ EG+   F++  S+A A   C  L  L     +H  + +  I 
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            D    NS + MY+K G +  A   F +I  + T S+ A++S   ++G  ++A   F KM
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                EP++ T+++++ +C+ L  L+ GK  H  +I +G+  E      +LI+ YA+CGK
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN-SLIDMYAKCGK 458

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +    +V   +  R+++SWN +I+ Y   G+ KEA  L + M+  G  PD  +    ++A
Sbjct: 459 IDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA 518

Query: 409 CGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-V 464
           C + G +  G        H   I  + E     ++D+ ++ G  + AY   + +  K+ V
Sbjct: 519 CSHSGLVTEGKHWFDTMTHKYGILPRMEHY-ICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 465 VMWNSMI--CGFYQN 477
            +W +++  C  ++N
Sbjct: 578 RVWGALLGACRIHKN 592



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 179/377 (47%), Gaps = 7/377 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPA---STRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL      L + T +HA+ L   L  +       T L++ YA+   L  +  VF     
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT-ISNFIYPSVLRACSSLGDLGSGEK 116
            +   W+ LI  ++  +   E+  L+  M+ E    +S     S LR C+SL DL  G +
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ 328

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  I K G   D     S+L  Y + G +++A   FD++  +D +S+ ++++    N  
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E   +F  M    +EPD  TM+SL  AC  L +L+  +  HG V+ R + ++  + NS
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS 448

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY+KCG +  + + F K+  R   SW  MI+ Y   G  ++A   F+ M      P+
Sbjct: 449 LIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPD 508

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKV 355
            +T I ++ +C+  G + EGK     +  K G+ P  ++    +++  A  G + E  + 
Sbjct: 509 DVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY-ICMVDLLARGGLLDEAYQF 567

Query: 356 IHAIG-ERNILSWNMLI 371
           I ++  + ++  W  L+
Sbjct: 568 IQSMPLKADVRVWGALL 584



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 131/276 (47%), Gaps = 5/276 (1%)

Query: 426 IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           I  + KD+      ++ +   G   LA  +F+RI       +N++I  +   G    AI+
Sbjct: 27  ISYEVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAID 86

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           L+  M    +  ++ TF   ++ACS +  L  G+ +H    + G+  D+++ TAL D+Y 
Sbjct: 87  LYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYI 146

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFM 604
           +C     A+ VF  M  R+VV+W+AM+  Y  HG  + A +    M D  G++PN  T +
Sbjct: 147 RCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLV 206

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY---ACMVDLLSRSGDIEGAFKMIHSM 661
           ++L   +  G++ +G           +E + +       ++D+ ++   +  A ++ H M
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM 266

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           P   N   W AL+ G  +  R+     + K++ V G
Sbjct: 267 PV-RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEG 301


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/571 (34%), Positives = 323/571 (56%), Gaps = 5/571 (0%)

Query: 175 ADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           +D+   L  F +M    G  P   T  SL + C     L   R++H  +  R +  +   
Sbjct: 203 SDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALA 262

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK- 292
             +   MY+KC     A R F ++  R   +W A+++ Y R+G  + A+   V+M E   
Sbjct: 263 ATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDG 322

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
           E P+ +TL++VL +CA    L   + VH   +R G   + + +  A+++ Y +CG +   
Sbjct: 323 ERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVN-VSTAILDVYCKCGAVDSA 381

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            KV   + +RN +SWN +I  YA  G + EAL L  +M   G+     SV ++L ACG +
Sbjct: 382 RKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGEL 441

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           G L  G ++H  +++I  +    V ++LI MY KC   +LA  +F+ +  K+ V WN+MI
Sbjct: 442 GFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMI 501

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G  QNG+S +A+ LF +M L  ++ D  T ++ I A ++I    + +W+H   I   + 
Sbjct: 502 LGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLD 561

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           +D+Y+ TAL DMYAKCG +  A+ +F+S  +R+V++W+AMI  YG HG    A  LF++M
Sbjct: 562 QDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEM 621

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGD 650
             SG  PNE TF+++L ACSH+G V+EG+ YF++M+  +G+EP ++HY  MVDLL R+G 
Sbjct: 622 KSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGK 681

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
           +  A+  I  MP     S++GA+L  C++HK +++ +   + +      +  Y+ LL+NI
Sbjct: 682 LHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANI 741

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           YA    W +  +VR+ ME  GL+K PG+S +
Sbjct: 742 YANASLWKDVARVRTAMEKKGLQKTPGWSIV 772



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 222/428 (51%), Gaps = 12/428 (2%)

Query: 2   PLFRSCTNLRKL----------TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLV 51
           P+ R+ T+L KL            +HA L   GL  +  A+T L   YA+      +R V
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282

Query: 52  FDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGD 110
           FD     D   W  L+  Y  N   E ++ +  +M  E     + +   SVL AC+    
Sbjct: 283 FDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQA 342

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           LG+  +VH   ++ GFD+   + T+IL  Y + G +D ARKVFD M  R+ VSW+++I  
Sbjct: 343 LGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKG 402

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           Y +N D +E L +F  MV EGV+   V++L+   ACGEL  L   R +H  ++R  ++ +
Sbjct: 403 YAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESN 462

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             + N+ I MY KC     A + F ++  +   SW AMI    ++G  + A+  F +M  
Sbjct: 463 VNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQL 522

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              +P+  TL++++ + A +    + + +H   IR  +  +  Y+  ALI+ YA+CG++S
Sbjct: 523 ENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDV-YVLTALIDMYAKCGRVS 581

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               + ++  +R++++WN +I  Y   G  K A+EL  +M++ G +P+  +  S LSAC 
Sbjct: 582 IARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACS 641

Query: 411 NVGSLQLG 418
           + G +  G
Sbjct: 642 HAGLVDEG 649



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 172/352 (48%), Gaps = 2/352 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       L     +HA  +  G       ST +++ Y + G++ S+R VFD  ++ +S
Sbjct: 334 LPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNS 393

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +IK Y  N    E++ L+ +M+ E   +++    + L AC  LG L  G +VH  
Sbjct: 394 VSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHEL 453

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ G + +  +  +++  Y +    D A +VFD++  +  VSW+++I     N    + 
Sbjct: 454 LVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDA 513

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +++F  M  E V+PD  T++S+  A  ++     AR IHG+ +R  +  D  +  + I M
Sbjct: 514 VRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 573

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG +  A   F     R   +W AMI  Y   G  + A+E F +M    + PN  T 
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSE 351
           ++VL +C+  G + EG+     +    G+ P  ++ G  +++     GK+ E
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYG-TMVDLLGRAGKLHE 684


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/665 (33%), Positives = 358/665 (53%), Gaps = 20/665 (3%)

Query: 89  EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSILCTYGEFGCL 146
           +Q  + + I   VLR C+  G +   + VHG ++K  F+  D  V+       Y +    
Sbjct: 114 QQTQVQDLI--DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEF 171

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
             A  VFD+M  R+V SW+ +I    ++    +G K F  M+  G+ PD     ++ ++C
Sbjct: 172 RAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC 231

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
             L SL   + +H  ++ R       +  S + MY+K G +  +   F  + +    SW 
Sbjct: 232 IGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWN 291

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           AMIS    +G   +A + FV+M      PN+ TL++V  +   L  +  GK V  Q    
Sbjct: 292 AMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV--QNCAS 349

Query: 327 GMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILS------WNMLISEYARKGM 379
            +G E + L G ALI+ Y++CG + +   V     + N ++      WN +IS Y++ G 
Sbjct: 350 ELGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGC 405

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQS 437
           S+EALEL VQM   G+  D ++  S  +A     SLQ G  +HG V+K  +D     V +
Sbjct: 406 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 465

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           ++ D YSKCGF      +F+R++++ +V W +++  + Q+    EA+  F  M       
Sbjct: 466 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 525

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           ++ TF + + +C+++  LE G+ VH  L   G+  +  I++AL DMYAKCG +  A +VF
Sbjct: 526 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 585

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D +S  ++VSW+A+I  Y  HG + DA  LF++M  SGIK N VT + +L+ACSH G VE
Sbjct: 586 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 645

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EG FYF  M   +GV P+++HYAC++DLL R G ++ A + I  MP   N  +W  LL G
Sbjct: 646 EGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 705

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+H  +++ +   +++       +  Y LLSN Y E G++++   +R++M+  G+KK P
Sbjct: 706 CRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 765

Query: 737 GYSTI 741
           GYS I
Sbjct: 766 GYSWI 770



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 171/613 (27%), Positives = 307/613 (50%), Gaps = 41/613 (6%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y++    R++  VFD   + + F W V+I     +  F +    + +M+        F Y
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
            +++++C  L  L  G+ VH +I+  GF     + TS+L  Y + G ++D+  VF+ MT 
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
            + VSW+++I+    N    E   +F  M      P+  T++S+++A G+L  +   + +
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC--TTSWTAMISCYNRSG 276
                   I+ +  +G + I MYSKCG L  A   F      C   T W AMIS Y++SG
Sbjct: 345 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 404

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             Q+ALE +V+M +     +L T  +V  + A    L+ G+ VH  +++ G+      + 
Sbjct: 405 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 464

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            A+ + Y++CG + +  KV   + ER+I+SW  L++ Y++  + +EAL     M+  G  
Sbjct: 465 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA 524

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLL 455
           P+ F+ +S L +C ++  L+ G Q+HG + K     E  ++S+LIDMY+KCG    A  +
Sbjct: 525 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 584

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F++I    +V W ++I G+ Q+G   +A+ LF +M L+ ++ + VT L  + ACS+ G +
Sbjct: 585 FDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMV 644

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E+G +   +               + D Y    +++                ++ +ID  
Sbjct: 645 EEGLFYFQQ---------------MEDGYGVVPEME---------------HYACIIDLL 674

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
           G  G+L+DA    ++M    ++PNE+ +  +L  C   G+VE G+    A +I  + P+ 
Sbjct: 675 GRVGRLDDAMEFIRKM---PMEPNEMVWQTLLGGCRVHGNVELGE--IAARKILSIRPE- 728

Query: 636 QHYACMVDLLSRS 648
             Y+    LLS +
Sbjct: 729 --YSATYVLLSNT 739



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 217/423 (51%), Gaps = 7/423 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + +SC  L  L     +HA +++ G       ST L+  YA++GS+  S  VF+   E +
Sbjct: 227 IIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHN 286

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     N    E+  L+ +M     T + +   SV +A   L D+  G++V  
Sbjct: 287 QVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQN 346

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK--MTSRDVVSWSSIIASYFDNADV 177
              + G + + ++ T+++  Y + G L DAR VFD   +       W+++I+ Y  +   
Sbjct: 347 CASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCS 406

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNS 236
            E L+++  M + G+  D  T  S+  A     SL+  R +HG VL+  + +    + N+
Sbjct: 407 QEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNA 466

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
               YSKCG L    + F ++E+R   SWT +++ Y++S   ++AL +F  M E    PN
Sbjct: 467 IADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPN 526

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T  +VL SCA L +L  G+ VH  + + G+  E   +  ALI+ YA+CG ++E  KV 
Sbjct: 527 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTE-KCIESALIDMYAKCGSITEAGKVF 585

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             I   +I+SW  +IS YA+ G+ ++AL+L  +M+  G+  ++ ++   L AC + G ++
Sbjct: 586 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 645

Query: 417 LGL 419
            GL
Sbjct: 646 EGL 648



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 4/335 (1%)

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM-GPEYDYLGPALIEFYAECGK 348
           E  ++  +  LI VL  CA  G +RE K+VH  +++      +   L       Y++C +
Sbjct: 111 ETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSE 170

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
                 V   + +RN+ SW ++I      G+  +  +   +M   G++PD F+ ++ + +
Sbjct: 171 FRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQS 230

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C  + SL+LG  +H  ++        FV +SL++MY+K G    +Y +F  + + + V W
Sbjct: 231 CIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSW 290

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           N+MI G   NG  LEA +LF +M       +  T ++  +A   +  +  GK V +    
Sbjct: 291 NAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASE 350

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS--WSAMIDCYGMHGQLNDAA 585
            G+  ++ + TAL DMY+KCG L  A+ VFD+      V+  W+AMI  Y   G   +A 
Sbjct: 351 LGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEAL 410

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            L+ QM  +GI  +  T+ ++  A + S S++ G+
Sbjct: 411 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGR 445


>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/637 (34%), Positives = 347/637 (54%), Gaps = 17/637 (2%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           + +H  +I  G   D    T+++  Y  FG L  AR +F ++ S    S+  II  +F N
Sbjct: 57  KTLHASLIISGHPPD----TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLN 112

Query: 175 ADVSEGLKMFHSMVRE--GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
            DV   +  F+++ R   G   D V    L +   +L  +     +H ++L+     D  
Sbjct: 113 -DVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAA-DSF 170

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +  S +  YSKCG L  A + F +I  R   SWT+MI  Y ++   ++ L  F +M E  
Sbjct: 171 VLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGF 230

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            + N+ T+ +++ +C  LG L +GK VH  +I+ G+     YL  +L+  Y +CG + + 
Sbjct: 231 LDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEIN-SYLATSLLNMYVKCGDIGDA 289

Query: 353 EKVIHAI------GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
             V          G  +++ W  +I  Y ++G  + ALEL    + + ++P+S ++AS L
Sbjct: 290 RSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLL 349

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           SAC  + ++ +G  +H  V+K    D  +++SL+DMY+KCG    A+ +F     K VV 
Sbjct: 350 SACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVS 409

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WNS+I G+ Q+G++ EA++LF++M +     D VT +  + AC+++G  + G  +H   +
Sbjct: 410 WNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFAL 469

Query: 527 SYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
            YG V   IY+ TAL + YAKCGD  +A+ VFD M E+N V+W+AMI   GM G    + 
Sbjct: 470 KYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSL 529

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDL 644
           +LF+ ML   + PNEV F  +L ACSHSG VEEG   F+ M +     P ++HYACMVDL
Sbjct: 530 ALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDL 589

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
           L+R+G+++ A   I  MP      ++GA L+GC +H   D  +   + +     +   YY
Sbjct: 590 LARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYY 649

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            L+SN+YA +G W    +VR +++  GL KVPG S +
Sbjct: 650 VLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLV 686



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 250/494 (50%), Gaps = 26/494 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++ + LR +   T+LH ++L +    D    T L+++Y++ G LR +R VFD   +  
Sbjct: 141 LLKTASQLRDIVLTTKLHCNILKSNA-ADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRS 199

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVH 118
              W  +I  Y+ N   EE ++L+++M RE     N F   S++ AC+ LG L  G+ VH
Sbjct: 200 VVSWTSMIVAYVQNECAEEGLMLFNRM-REGFLDGNVFTVGSLVTACTKLGCLHQGKWVH 258

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT------SRDVVSWSSIIASYF 172
           G +IK G + +  + TS+L  Y + G + DAR VFD+ +        D+V W+++I  Y 
Sbjct: 259 GYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYT 318

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
                   L++F       + P+ VT+ SL  AC +L ++   + +H  V++  +  D  
Sbjct: 319 QRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTS 377

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           L NS + MY+KCG +  A   F     +   SW ++IS Y +SG   +AL+ F +M    
Sbjct: 378 LRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMES 437

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             P+ +T++ VL +CA +G  + G S+H   ++ G+     Y+G AL+ FYA+CG  +  
Sbjct: 438 FLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSA 497

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             V   +GE+N ++W  +I     +G    +L L   M    L+P+     + L+AC + 
Sbjct: 498 RMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHS 557

Query: 413 GSLQLGLQIHGHVIKIDCKD-EFVQS-----SLIDMYSKCGFKNLAYLLFERIQ-QKSVV 465
           G ++ GL I        CK+  FV S      ++D+ ++ G    A    +++  Q  V 
Sbjct: 558 GMVEEGLMI----FDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVG 613

Query: 466 MWNSMI--CGFYQN 477
           ++ + +  CG + N
Sbjct: 614 VFGAFLHGCGLHSN 627


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/636 (33%), Positives = 350/636 (55%), Gaps = 12/636 (1%)

Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
           GDLG+  K+   +      K+ +   +++  Y + G L  AR +FD M  R VV+W+ +I
Sbjct: 56  GDLGAARKLFDEMPH----KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLI 111

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
             Y  +    E   +F  M R G+ PD +T+ +L     E  S+     +HGHV+  K+ 
Sbjct: 112 GGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVV--KVG 169

Query: 229 IDGPLG--NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
            D  L   NS +  Y K   L  A   F  + ++   ++ A+++ Y++ G+   A+  F 
Sbjct: 170 YDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFF 229

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           KM ++   P+  T   VL +   +  +  G+ VH  +++        ++  AL++FY++ 
Sbjct: 230 KMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNV-FVANALLDFYSKH 288

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
            ++ E  K+ + + E + +S+N+LI+  A  G  +E+LEL  ++Q        F  A+ L
Sbjct: 289 DRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLL 348

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           S   N  +L++G QIH   I  D   E  V +SL+DMY+KC     A  +F  +  +S V
Sbjct: 349 SIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSV 408

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            W ++I G+ Q G   + + LF +M+   +  D  T+ + ++AC+N+  L  GK +H ++
Sbjct: 409 PWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRI 468

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
           I  G   +++  +AL DMYAKCG ++ A ++F  M  RN VSW+A+I  Y  +G    A 
Sbjct: 469 IRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHAL 528

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDL 644
             F+QM+ SG++PN V+F++IL ACSH G VEEG  YFN+M +++ +EP  +HYA MVD+
Sbjct: 529 RSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDM 588

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGY 703
           L RSG  + A K++  MPF  +  +W ++LN CRIHK  ++ +K  ++  ++ G  D   
Sbjct: 589 LCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAP 648

Query: 704 YTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           Y  +SNIYA  G WD  GKV+  +   G++KVP YS
Sbjct: 649 YVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYS 684



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 285/573 (49%), Gaps = 8/573 (1%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H +  ++  +I  Y + G+L ++R +FD+  +     W +LI  Y  +N F E+  L+  
Sbjct: 70  HKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFAD 129

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M R      +    ++L   +    +    +VHG ++K G+D   ++  S+L +Y +   
Sbjct: 130 MCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS 189

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L  A  +F  M  +D V++++++  Y       + + +F  M   G  P   T  ++  A
Sbjct: 190 LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
             ++  +   + +H  V++     +  + N+ +  YSK   ++ A + F ++ +    S+
Sbjct: 250 GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
             +I+C   +G  +++LE F ++   + +       T+L   A    L  G+ +H Q I 
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIV 369

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
                E   +G +L++ YA+C K  E  ++   +  ++ + W  LIS Y +KG+ ++ L+
Sbjct: 370 TDAISEV-LVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLK 428

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYS 444
           L V+M    +  DS + AS L AC N+ SL LG Q+H  +I+  C  + F  S+L+DMY+
Sbjct: 429 LFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYA 488

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  +F+ +  ++ V WN++I  + QNG+   A+  F QM  + L+ + V+FL+
Sbjct: 489 KCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLS 548

Query: 505 AIQACSNIGQLEKG-KWVHHKLISYGV--RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            + ACS+ G +E+G ++ +     Y +  R++ Y   ++ DM  + G    A+++   M 
Sbjct: 549 ILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHY--ASMVDMLCRSGRFDEAEKLMARMP 606

Query: 562 -ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            E + + WS++++   +H     A     Q+ +
Sbjct: 607 FEPDEIMWSSILNSCRIHKNQELAIKAADQLFN 639



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 254/536 (47%), Gaps = 12/536 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    ++ ++ ++H H++  G          L++SY +  SL  +  +F    E D+  +
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTF 208

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             L+  Y    F  ++I L+ KM       S F + +VL A   + D+  G++VH  ++K
Sbjct: 209 NALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK 268

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
           C F  +  +  ++L  Y +   + +ARK+F +M   D +S++ +I     N  V E L++
Sbjct: 269 CNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLEL 328

Query: 184 FHSMVREGVEP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           F  +     +     F T+LS+A       +L   R IH   +      +  +GNS + M
Sbjct: 329 FRELQFTRFDRRQFPFATLLSIA---ANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDM 385

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KC     A R F  +  + +  WTA+IS Y + G  +  L+ FV+M   K   +  T 
Sbjct: 386 YAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATY 445

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            ++L +CA L  L  GK +H +IIR G      + G AL++ YA+CG + E  ++   + 
Sbjct: 446 ASILRACANLASLTLGKQLHSRIIRSGCLSNV-FSGSALVDMYAKCGSIKEALQMFQEMP 504

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            RN +SWN LIS YA+ G    AL    QM   GL P+S S  S L AC + G ++ GLQ
Sbjct: 505 VRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQ 564

Query: 421 IHG---HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQ 476
                  V K++ + E   +S++DM  + G  + A  L  R+  +   +MW+S++     
Sbjct: 565 YFNSMTQVYKLEPRREHY-ASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRI 623

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           + N   AI    Q++      D   +++     +  G+ +    V   L   G+RK
Sbjct: 624 HKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRK 679


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/665 (33%), Positives = 358/665 (53%), Gaps = 20/665 (3%)

Query: 89  EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSILCTYGEFGCL 146
           +Q  + + I   VLR C+  G +   + VHG ++K  F+  D  V+       Y +    
Sbjct: 60  QQTQVQDLI--DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEF 117

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
             A  VFD+M  R+V SW+ +I    ++    +G K F  M+  G+ PD     ++ ++C
Sbjct: 118 RAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC 177

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
             L SL   + +H  ++ R       +  S + MY+K G +  +   F  + +    SW 
Sbjct: 178 IGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWN 237

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           AMIS    +G   +A + FV+M      PN+ TL++V  +   L  +  GK V  Q    
Sbjct: 238 AMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV--QNCAS 295

Query: 327 GMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILS------WNMLISEYARKGM 379
            +G E + L G ALI+ Y++CG + +   V     + N ++      WN +IS Y++ G 
Sbjct: 296 ELGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGC 351

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQS 437
           S+EALEL VQM   G+  D ++  S  +A     SLQ G  +HG V+K  +D     V +
Sbjct: 352 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 411

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           ++ D YSKCGF      +F+R++++ +V W +++  + Q+    EA+  F  M       
Sbjct: 412 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 471

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           ++ TF + + +C+++  LE G+ VH  L   G+  +  I++AL DMYAKCG +  A +VF
Sbjct: 472 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 531

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D +S  ++VSW+A+I  Y  HG + DA  LF++M  SGIK N VT + +L+ACSH G VE
Sbjct: 532 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 591

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EG FYF  M   +GV P+++HYAC++DLL R G ++ A + I  MP   N  +W  LL G
Sbjct: 592 EGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 651

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+H  +++ +   +++       +  Y LLSN Y E G++++   +R++M+  G+KK P
Sbjct: 652 CRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 711

Query: 737 GYSTI 741
           GYS I
Sbjct: 712 GYSWI 716



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 172/621 (27%), Positives = 311/621 (50%), Gaps = 41/621 (6%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y++    R++  VFD   + + F W V+I     +  F +    + +M+        F Y
Sbjct: 111 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 170

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
            +++++C  L  L  G+ VH +I+  GF     + TS+L  Y + G ++D+  VF+ MT 
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
            + VSW+++I+    N    E   +F  M      P+  T++S+++A G+L  +   + +
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC--TTSWTAMISCYNRSG 276
                   I+ +  +G + I MYSKCG L  A   F      C   T W AMIS Y++SG
Sbjct: 291 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 350

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             Q+ALE +V+M +     +L T  +V  + A    L+ G+ VH  +++ G+      + 
Sbjct: 351 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 410

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            A+ + Y++CG + +  KV   + ER+I+SW  L++ Y++  + +EAL     M+  G  
Sbjct: 411 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA 470

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLL 455
           P+ F+ +S L +C ++  L+ G Q+HG + K     E  ++S+LIDMY+KCG    A  +
Sbjct: 471 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 530

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F++I    +V W ++I G+ Q+G   +A+ LF +M L+ ++ + VT L  + ACS+ G +
Sbjct: 531 FDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMV 590

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E+G +   +               + D Y    +++                ++ +ID  
Sbjct: 591 EEGLFYFQQ---------------MEDGYGVVPEME---------------HYACIIDLL 620

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
           G  G+L+DA    ++M    ++PNE+ +  +L  C   G+VE G+    A +I  + P+ 
Sbjct: 621 GRVGRLDDAMEFIRKM---PMEPNEMVWQTLLGGCRVHGNVELGE--IAARKILSIRPE- 674

Query: 636 QHYACMVDLLSRSGDIEGAFK 656
             Y+    LLS +    G+++
Sbjct: 675 --YSATYVLLSNTYIETGSYE 693



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 275/569 (48%), Gaps = 22/569 (3%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + +SC  L  L     +HA +++ G       ST L+  YA++GS+  S  VF+   E +
Sbjct: 173 IIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHN 232

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     N    E+  L+ +M     T + +   SV +A   L D+  G++V  
Sbjct: 233 QVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQN 292

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK--MTSRDVVSWSSIIASYFDNADV 177
              + G + + ++ T+++  Y + G L DAR VFD   +       W+++I+ Y  +   
Sbjct: 293 CASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCS 352

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNS 236
            E L+++  M + G+  D  T  S+  A     SL+  R +HG VL+  + +    + N+
Sbjct: 353 QEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNA 412

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
               YSKCG L    + F ++E+R   SWT +++ Y++S   ++AL +F  M E    PN
Sbjct: 413 IADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPN 472

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T  +VL SCA L +L  G+ VH  + + G+  E   +  ALI+ YA+CG ++E  KV 
Sbjct: 473 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTE-KCIESALIDMYAKCGSITEAGKVF 531

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             I   +I+SW  +IS YA+ G+ ++AL+L  +M+  G+  ++ ++   L AC + G ++
Sbjct: 532 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 591

Query: 417 LGL----QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMI 471
            GL    Q+      +   + +  + +ID+  + G  + A     ++  + + ++W +++
Sbjct: 592 EGLFYFQQMEDGYGVVPEMEHY--ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLL 649

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G   +GN +E   +  +  L+       T++         G  E G  + + +   GV+
Sbjct: 650 GGCRVHGN-VELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVK 708

Query: 532 KD-----IYIDTALTDMYAKCGDLQTAQR 555
           K+     I +   +   Y+  GD Q  Q+
Sbjct: 709 KEPGYSWISVKGRVHKFYS--GDQQHPQK 735



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 4/335 (1%)

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM-GPEYDYLGPALIEFYAECGK 348
           E  ++  +  LI VL  CA  G +RE K+VH  +++      +   L       Y++C +
Sbjct: 57  ETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSE 116

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
                 V   + +RN+ SW ++I      G+  +  +   +M   G++PD F+ ++ + +
Sbjct: 117 FRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQS 176

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C  + SL+LG  +H  ++        FV +SL++MY+K G    +Y +F  + + + V W
Sbjct: 177 CIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSW 236

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           N+MI G   NG  LEA +LF +M       +  T ++  +A   +  +  GK V +    
Sbjct: 237 NAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASE 296

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS--WSAMIDCYGMHGQLNDAA 585
            G+  ++ + TAL DMY+KCG L  A+ VFD+      V+  W+AMI  Y   G   +A 
Sbjct: 297 LGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEAL 356

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            L+ QM  +GI  +  T+ ++  A + S S++ G+
Sbjct: 357 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGR 391


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/727 (30%), Positives = 364/727 (50%), Gaps = 4/727 (0%)

Query: 16   LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            +HA     GL  +    T L+  Y   G +  ++ +F    E +   W  L+     N +
Sbjct: 368  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 427

Query: 76   FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             EE++  Y +M R+    +   + +V+  C SL +   G +V  ++I  G      +  S
Sbjct: 428  LEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANS 487

Query: 136  ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
            ++  +G  G + DA K+FD+M   D +SW+++I+ Y      S+   +F  M   G+ PD
Sbjct: 488  LITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPD 547

Query: 196  FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              T+ SL   C           IH   LR  +     + N+ + MYS  G L  AE  F 
Sbjct: 548  ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 607

Query: 256  KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
             + +R   SW  MIS Y ++     AL++  ++    E PN +T  + LG+C+  G L +
Sbjct: 608  NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 667

Query: 316  GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
            GK VH  +++  +      +G +LI  Y +C  M + EKV  ++   +I+S+N+LI  YA
Sbjct: 668  GKMVHAIVLQLSLQRNL-LVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 726

Query: 376  RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-LGLQIHGHVIKID-CKDE 433
                  +A+++   M++ G+ P+  ++ +   +  +   L   G  +H ++I+     DE
Sbjct: 727  VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 786

Query: 434  FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            +V +SLI MY+KCG    +  +F  I  K++V WN++I    Q G+  EA+ LF  M   
Sbjct: 787  YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHA 846

Query: 494  CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
              ++D V     + +C+++  LE+G  +H   +  G+  D Y+  A  DMY KCG +   
Sbjct: 847  GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEM 906

Query: 554  QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
             +V    + R    W+ +I  Y  +G   +A   FKQM+ +G KP+ VTF+ +L ACSH+
Sbjct: 907  LQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHA 966

Query: 614  GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
            G V++G  Y+N+M   FGV P ++H  C+VDLL R G    A K I  MP   N  IW +
Sbjct: 967  GLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRS 1026

Query: 673  LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
            LL+  R HK +++ +   K+L      D+  Y LLSN+YA    W +  K+RS M+   +
Sbjct: 1027 LLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTINI 1086

Query: 733  KKVPGYS 739
             K P  S
Sbjct: 1087 NKRPACS 1093



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 174/673 (25%), Positives = 318/673 (47%), Gaps = 20/673 (2%)

Query: 51  VFDTF--KEPDSFMWAV--LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS 106
           +FD    + P ++  AV   ++C      FE    +   M      +S F   S++ AC 
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFE----MLRGMREPGVPLSGFALASLVTACE 354

Query: 107 SLG---DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
             G    +  G  +H    + G   +  I T++L  YG  G + DA+++F +M  R+VVS
Sbjct: 355 RRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVS 414

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W++++ +   N  + E L+ +  M R+GV  +     ++   CG L +  P   +   V+
Sbjct: 415 WTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVI 474

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
              ++    + NS I M+   G +  AE+ F ++E+  T SW AMIS Y+  G   K   
Sbjct: 475 VSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFL 534

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
            F  M      P+  TL +++  CA       G  +H   +R  +      +  AL+  Y
Sbjct: 535 VFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVIN-ALVNMY 593

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
           +  GK+S+ E +   +  R+++SWN +IS Y +   S +AL+ L Q+      P+  + +
Sbjct: 594 SAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFS 653

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           S+L AC + G+L  G  +H  V+++   ++  V +SLI MY KC     A  +F+ +   
Sbjct: 654 SALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 713

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWV 521
            +V +N +I G+    +  +A+ +F  M    ++ + +T +    + ++   L   G+ +
Sbjct: 714 DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPL 773

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  +I  G   D Y+  +L  MYAKCG+L+++  +F+S++ +N+VSW+A+I      G  
Sbjct: 774 HAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHG 833

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACM 641
            +A  LF  M  +G K + V     L +C+   S+EEG          G++ D       
Sbjct: 834 EEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAA 893

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPA--NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
           +D+  + G ++   +M+  +P  A      W  L++G   +      +   K++  TG  
Sbjct: 894 MDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRK 950

Query: 700 DNGYYTLLSNIYA 712
            + Y T ++ + A
Sbjct: 951 PD-YVTFVALLSA 962


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/727 (30%), Positives = 364/727 (50%), Gaps = 4/727 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA     GL  +    T L+  Y   G +  ++ +F    E +   W  L+     N +
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE++  Y +M R+    +   + +V+  C SL +   G +V  ++I  G      +  S
Sbjct: 126 LEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANS 185

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  +G  G + DA K+FD+M   D +SW+++I+ Y      S+   +F  M   G+ PD
Sbjct: 186 LITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPD 245

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ SL   C           IH   LR  +     + N+ + MYS  G L  AE  F 
Sbjct: 246 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +R   SW  MIS Y ++     AL++  ++    E PN +T  + LG+C+  G L +
Sbjct: 306 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 365

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH  +++  +      +G +LI  Y +C  M + EKV  ++   +I+S+N+LI  YA
Sbjct: 366 GKMVHAIVLQLSLQRNL-LVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-LGLQIHGHVIKID-CKDE 433
                 +A+++   M++ G+ P+  ++ +   +  +   L   G  +H ++I+     DE
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 484

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           +V +SLI MY+KCG    +  +F  I  K++V WN++I    Q G+  EA+ LF  M   
Sbjct: 485 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHA 544

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
             ++D V     + +C+++  LE+G  +H   +  G+  D Y+  A  DMY KCG +   
Sbjct: 545 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEM 604

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
            +V    + R    W+ +I  Y  +G   +A   FKQM+ +G KP+ VTF+ +L ACSH+
Sbjct: 605 LQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHA 664

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V++G  Y+N+M   FGV P ++H  C+VDLL R G    A K I  MP   N  IW +
Sbjct: 665 GLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRS 724

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL+  R HK +++ +   K+L      D+  Y LLSN+YA    W +  K+RS M+   +
Sbjct: 725 LLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTINI 784

Query: 733 KKVPGYS 739
            K P  S
Sbjct: 785 NKRPACS 791



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 167/634 (26%), Positives = 306/634 (48%), Gaps = 13/634 (2%)

Query: 87  IREQAT-ISNFIYPSVLRACSSLG---DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +RE+   +S F   S++ AC   G    +  G  +H    + G   +  I T++L  YG 
Sbjct: 32  MRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGS 91

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G + DA+++F +M  R+VVSW++++ +   N  + E L+ +  M R+GV  +     ++
Sbjct: 92  RGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATV 151

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
              CG L +  P   +   V+   ++    + NS I M+   G +  AE+ F ++E+  T
Sbjct: 152 VSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDT 211

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW AMIS Y+  G   K    F  M      P+  TL +++  CA       G  +H  
Sbjct: 212 ISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSL 271

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            +R  +      +  AL+  Y+  GK+S+ E +   +  R+++SWN +IS Y +   S +
Sbjct: 272 CLRSSLDSSVTVIN-ALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTD 330

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           AL+ L Q+      P+  + +S+L AC + G+L  G  +H  V+++   ++  V +SLI 
Sbjct: 331 ALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLIT 390

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY KC     A  +F+ +    +V +N +I G+    +  +A+ +F  M    ++ + +T
Sbjct: 391 MYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYIT 450

Query: 502 FLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            +    + ++   L   G+ +H  +I  G   D Y+  +L  MYAKCG+L+++  +F+S+
Sbjct: 451 MINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI 510

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           + +N+VSW+A+I      G   +A  LF  M  +G K + V     L +C+   S+EEG 
Sbjct: 511 TNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGM 570

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA--NGSIWGALLNGCR 678
                    G++ D       +D+  + G ++   +M+  +P  A      W  L++G  
Sbjct: 571 QLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYA 627

Query: 679 IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            +      +   K++  TG   + Y T ++ + A
Sbjct: 628 KYGYFKEAEETFKQMVATGRKPD-YVTFVALLSA 660



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 137/300 (45%), Gaps = 4/300 (1%)

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SL 415
           + +R   +W   +S   R G    A E+L  M+  G+    F++AS ++AC   G    +
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 416 QLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             G  IH    +     + ++ ++L+ +Y   G  + A  LF  + +++VV W +++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
             NG   EA+  + QM  + +  +   F T +  C ++     G  V  ++I  G++  +
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            +  +L  M+   G +  A+++FD M E + +SW+AMI  Y   G  +    +F  M   
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           G++P+  T  +++  C+ S     G    +      ++  +     +V++ S +G +  A
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300


>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/658 (32%), Positives = 359/658 (54%), Gaps = 9/658 (1%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R  +  +N +   +L AC++L  L     +H R++  G  +     T +L  Y   G L 
Sbjct: 21  RASSPDANPLLHRLLPACTTLPSL---RALHARLLAHGLLRGLRAHTKLLSCYAALGDLA 77

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLA-EA 205
            AR+V D+    D  ++   +  +      +E + +   M R    E + V +LSLA +A
Sbjct: 78  SARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKA 137

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
                     R +H  V++     D  + N+ + MY+K GDL +A + F +I  R   SW
Sbjct: 138 AVRSADFGYGRRLHCDVVKAGGG-DLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSW 196

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           T+M+S   ++G  ++ L  F +M +    P+  T+ +VL +C  LG L +G+ +H  +++
Sbjct: 197 TSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMK 256

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G+   + ++  A+++ Y +CG+  +  +V   +   +++ W  +I  Y + G   +AL 
Sbjct: 257 HGLVSNH-FITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALL 315

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYS 444
           L V  +   ++P+S ++A+ LSA   + +L LG  IHG  +K+   +++ V ++L+DMY+
Sbjct: 316 LFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYA 375

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KC   + A  +F R+  K VV WNS+I G+ +N    +A+ LF  M +     D ++ + 
Sbjct: 376 KCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVN 435

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
           A+ AC  +G L  GK  H   + +    +IY++TAL ++Y KC DL +AQRVF  M++RN
Sbjct: 436 ALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRN 495

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            V+W AMI  YGM G    +  LF +ML   I+PNE  F +IL  CSH+G V  GK  F 
Sbjct: 496 TVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFE 555

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           +M   F + P ++HYACMVD+L+R+G++E A + I  MP  A+ SIW A L+GC++H R+
Sbjct: 556 SMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRL 615

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +  +     + V   +   +  ++SN+Y   G WD+   +R +M+  GL K+PG S++
Sbjct: 616 EFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSV 673



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 178/597 (29%), Positives = 305/597 (51%), Gaps = 11/597 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  +CT L  L  LHA LL  GL     A T+L+  YA +G L S+R V D    PD++ 
Sbjct: 34  LLPACTTLPSLRALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYT 93

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIR----EQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + V +  +       E++ ++  M R    EQ  +   +    L+A     D G G ++H
Sbjct: 94  YKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQEDV--VVLSLALKAAVRSADFGYGRRLH 151

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             ++K G   D  +  +++  Y + G L +ARKVFD++  R+VVSW+S+++    N    
Sbjct: 152 CDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAK 210

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           EGL +F+ M +E + P   TM S+  AC  L SL   R IHG V++  +  +  +  + +
Sbjct: 211 EGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAML 270

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG+   A + F ++       WT MI  Y ++G    AL  FV    ++  PN +
Sbjct: 271 DMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSV 330

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ TVL + A L  L  G+S+H   ++ G   E D +  AL++ YA+C  +S+ + +   
Sbjct: 331 TIATVLSASAQLRNLSLGRSIHGISVKLG-AVENDVVMNALVDMYAKCKALSDAKGIFGR 389

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  +++++WN LI+ YA   M  +AL L   M+  G +PD+ SV ++LSAC  +G L +G
Sbjct: 390 VLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIG 449

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
              H + +K     + +V ++L+++Y+KC     A  +F  +  ++ V W +MI G+   
Sbjct: 450 KCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQ 509

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY-GVRKDIYI 536
           G+S  +I+LF++M  + ++ +E  F + +  CS+ G +  GK     +  Y  +   +  
Sbjct: 510 GDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKH 569

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQML 592
              + D+ A+ G+L+ A      M  +   S W A +    +H +L  A     +M+
Sbjct: 570 YACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMM 626


>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 748

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/662 (32%), Positives = 365/662 (55%), Gaps = 7/662 (1%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +  M+  +     F +PS+L+AC+SL  L  G  +H +++  GF  D  I +S++  Y +
Sbjct: 34  FSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIHQKVLVNGFSSDSYISSSLVNLYAK 93

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FG L  ARKVFD+M  RDVV W+++I  Y       E   +   M  +G++P  VT L +
Sbjct: 94  FGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEM 153

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
                E+  L+    +H   L    + D  + NS + +Y KC  +  A+  F ++E+R  
Sbjct: 154 LSGISEITQLQ---CLHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDM 210

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW  MIS +       + L+   +M +    P+  T    L     +  L  G+ +HCQ
Sbjct: 211 VSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I+  G   +  +L  ALI  Y +CG+     +V+  I +++++ W ++IS   R G +++
Sbjct: 271 IVGTGFDGDM-HLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEK 329

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
           AL +  +M   G    S ++AS +++C  +GS  LG  +HG+V++     D    +S I 
Sbjct: 330 ALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFIT 389

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE-MDEV 500
           MY+KCG  + + +LFER+ ++ +V WN++I G  Q+G+  +A+ LF +M    ++ +D +
Sbjct: 390 MYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSL 449

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T ++ +QACS+ G L  G+ +H  +I   +R    +DTAL DMY+KCG L+ AQR F+S+
Sbjct: 450 TVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSI 509

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           + ++VVSW  +I  YG HG+ + A  ++ + L  G+KPN V F+ +L +CSH+G V++G 
Sbjct: 510 TWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGL 569

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
             F++M R FGVEP+ +H AC+VDLL R+  +E AFK         +  + G +L+    
Sbjct: 570 KIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTRPSIDVLGIILDASHA 629

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + + +V   I +++      D G+Y  L + +A    WD+  +  + M   GLKK+PG+S
Sbjct: 630 NGKTEVEDIICRDMIELKPVDAGHYVRLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689

Query: 740 TI 741
            I
Sbjct: 690 KI 691



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/564 (29%), Positives = 286/564 (50%), Gaps = 16/564 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++CT+L+ L+    +H  +LV G   D   S+ L+  YA+ G L  +R VFD  ++ D
Sbjct: 52  LLKACTSLQLLSFGLSIHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRD 111

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I CY     F E+  L  +M  +    S   +  +L   S +  L   + +H 
Sbjct: 112 VVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLSGISEITQL---QCLHA 168

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +  GF+ D  +  S+L  Y +   + DA+++FD+M  RD+VSW+++I+ +   A++SE
Sbjct: 169 FALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSE 228

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+ + M  +G+ PD  T  +     G +C L   R +H  ++      D  L  + I 
Sbjct: 229 ILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALIT 288

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG+  ++ R    I  +    WT MIS   R G  +KAL  F +ML    + +   
Sbjct: 289 MYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEA 348

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL---IEFYAECGKMSECEKVI 356
           + +V+ SCA LG    G SVH  ++R+G    Y    PAL   I  YA+CG + +   + 
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRQG----YTLDTPALNSFITMYAKCGHLDKSLILF 404

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP-DSFSVASSLSACGNVGSL 415
             + ER+++SWN +IS +A+ G   +AL L  +M+   +   DS +V S L AC + G+L
Sbjct: 405 ERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGAL 464

Query: 416 QLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            +G  IH  VI+   +    V ++L+DMYSKCG+   A   F  I  K VV W ++I G+
Sbjct: 465 PVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGY 524

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKD 533
             +G    A+ ++ +     ++ + V FL  + +CS+ G +++G  +   ++  +GV  +
Sbjct: 525 GFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPN 584

Query: 534 IYIDTALTDMYAKCGDLQTAQRVF 557
                 + D+  +   ++ A + +
Sbjct: 585 HEHLACVVDLLCRAKRVEDAFKFY 608



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 275/541 (50%), Gaps = 9/541 (1%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           ++S I     + D  + L  F SM+   + PD  T  SL +AC  L  L    SIH  VL
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIHQKVL 73

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
                 D  + +S + +Y+K G L  A + F ++  R    WTAMI CY+R+G F +A  
Sbjct: 74  VNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACS 133

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
              +M     +P+ +T + +L   +G+  + + + +H   +  G   +   +  +++  Y
Sbjct: 134 LVKEMRFQGIKPSPVTFLEML---SGISEITQLQCLHAFALVYGFECDIAVMN-SMLNLY 189

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            +C ++ + +++   + +R+++SWN +IS +A      E L+LL +M+  GL PD  +  
Sbjct: 190 CKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFG 249

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           +SLS  G +  L++G  +H  ++      D  ++++LI MY KCG +  +Y + E I  K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDK 309

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            VV W  MI G  + G + +A+ +F +M  +  ++      + + +C+ +G  + G  VH
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVH 369

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             ++  G   D     +   MYAKCG L  +  +F+ M+ER++VSW+A+I  +  HG L 
Sbjct: 370 GYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLC 429

Query: 583 DAASLFKQMLDSGIKP-NEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYAC 640
            A  LF++M    ++  + +T +++L ACS +G++  G+  +   +R F + P       
Sbjct: 430 KALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSF-IRPCTLVDTA 488

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           +VD+ S+ G +E A +  +S+ +    S WG L+ G   H + D+   I  E    G   
Sbjct: 489 LVDMYSKCGYLEAAQRCFNSITWKDVVS-WGTLIAGYGFHGKGDIALEIYSEFLHFGMKP 547

Query: 701 N 701
           N
Sbjct: 548 N 548



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 218/428 (50%), Gaps = 2/428 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + +    + + +L  LHA  LV G   D      ++  Y +   +  ++ +FD  ++ D 
Sbjct: 151 LEMLSGISEITQLQCLHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDM 210

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  + +     E + L ++M  +        + + L    ++ DL  G  +H +
Sbjct: 211 VSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+  GFD D  ++T+++  Y + G  + + +V + +  +DVV W+ +I+         + 
Sbjct: 271 IVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKA 330

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M+  G +     + S+  +C +L S     S+HG+VLR+   +D P  NSFI M
Sbjct: 331 LIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITM 390

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLIT 299
           Y+KCG L  +   F ++ +R   SW A+IS + + G   KAL  F +M  +  ++ + +T
Sbjct: 391 YAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLT 450

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++++L +C+  G L  G+ +HC +IR  + P    +  AL++ Y++CG +   ++  ++I
Sbjct: 451 VVSLLQACSSAGALPVGRMIHCIVIRSFIRP-CTLVDTALVDMYSKCGYLEAAQRCFNSI 509

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             ++++SW  LI+ Y   G    ALE+  +   +G+ P+     + LS+C + G +Q GL
Sbjct: 510 TWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGL 569

Query: 420 QIHGHVIK 427
           +I   +++
Sbjct: 570 KIFSSMVR 577


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/604 (34%), Positives = 332/604 (54%), Gaps = 6/604 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L  AR+VFD++ + D  +++++I +Y         + ++ SM+   V P+  T   + 
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +AC  L  L   R+IH H     +  D  +  + I +Y +C     A   F K+  R   
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           +W AM++ Y   G +  A+   + M +     PN  TL+++L   A  G L +G SVH  
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 323 IIRKGM--GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            +R  +    E   +G AL++ YA+C  +    +V H +  RN ++W+ LI  +      
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 381 KEALELLVQMQTWGL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SS 438
            EA  L   M   G+    + SVAS+L  C ++  L++G Q+H  + K     +    +S
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+ MY+K G  N A +LF+ I  K  + + +++ G+ QNG + EA  +F +M    ++ D
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
             T ++ I ACS++  L+ G+  H  +I  G+  +  I  +L DMYAKCG +  +++VFD
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFD 466

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M  R++VSW+ MI  YG+HG   +A +LF  M + G +P++VTF+ ++ ACSHSG V E
Sbjct: 467 KMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTE 526

Query: 619 GKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           GK +F+ M   +G+ P ++HY CMVDLL+R G ++ A++ I SMP  A+  +WGALL  C
Sbjct: 527 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGAC 586

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           RIHK ID+ K + + +   G    G + LLSNI++  G +DE  +VR I +V G KK PG
Sbjct: 587 RIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 646

Query: 738 YSTI 741
            S I
Sbjct: 647 CSWI 650



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 165/557 (29%), Positives = 278/557 (49%), Gaps = 13/557 (2%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN 95
           +E +   G L  +R VFD    PD+  +  LI+ Y W   F  +I LY  M+  +   + 
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           + +P VL+ACS+L DL +G  +H      G   D  + T+++  Y        A  VF K
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRP 214
           M  RDVV+W++++A Y ++      +     M  R G+ P+  T++SL     +  +L  
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219

Query: 215 ARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
             S+H + LR  +  +     +G + + MY+KC  L+ A R F  +  R   +W+A+I  
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279

Query: 272 YNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           +       +A   F  ML E     +  ++ + L  CA L  LR G  +H  + + G+  
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHA 339

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +    G +L+  YA+ G ++E   +   I  ++ +S+  L+S Y + G ++EA  +  +M
Sbjct: 340 DLT-AGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFK 449
           Q   + PD  ++ S + AC ++ +LQ G   HG VI      E  + +SLIDMY+KCG  
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRI 458

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           +L+  +F+++  + +V WN+MI G+  +G   EA  LF  M     E D+VTF+  I AC
Sbjct: 459 DLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAAC 518

Query: 510 SNIGQLEKGK-WVHHKLISYGV--RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNV 565
           S+ G + +GK W       YG+  R + YI   + D+ A+ G L  A +   SM  + +V
Sbjct: 519 SHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVDLLARGGFLDEAYQFIQSMPLKADV 576

Query: 566 VSWSAMIDCYGMHGQLN 582
             W A++    +H  ++
Sbjct: 577 RVWGALLGACRIHKNID 593



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 238/495 (48%), Gaps = 28/495 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+ L  L     +HAH    GLH D   ST LI+ Y        +  VF      D
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKM-----IREQATISNFIYPSVLRACSSLGDLGSG 114
              W  ++  Y  +  +  +I     M     +R  A+       S+L   +  G L  G
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNAS----TLVSLLPLLAQHGALFQG 220

Query: 115 EKVHGRIIKCGFDKDD---VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             VH   ++   D+++   +I T++L  Y +   L  A +VF  MT R+ V+WS++I  +
Sbjct: 221 TSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGF 280

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA---CGELCSLRPARSIHGHVLRRKIK 228
                ++E   +F  M+ EG+   F++  S+A A   C  L  LR    +H  + +  I 
Sbjct: 281 VLCDRMTEAFNLFKDMLVEGMC--FLSATSVASALRVCASLADLRMGTQLHALLAKSGIH 338

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            D   GNS + MY+K G +  A   F +I  + T S+ A++S Y ++G  ++A   F KM
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                +P++ T+++++ +C+ L  L+ G+  H  +I +G+  E   +  +LI+ YA+CG+
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETS-ICNSLIDMYAKCGR 457

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +    +V   +  R+I+SWN +I+ Y   G+ KEA  L + M+  G  PD  +    ++A
Sbjct: 458 IDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAA 517

Query: 409 CGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-V 464
           C + G +  G        H   I  + E     ++D+ ++ GF + AY   + +  K+ V
Sbjct: 518 CSHSGLVTEGKHWFDTMTHKYGILPRMEHY-ICMVDLLARGGFLDEAYQFIQSMPLKADV 576

Query: 465 VMWNSMI--CGFYQN 477
            +W +++  C  ++N
Sbjct: 577 RVWGALLGACRIHKN 591



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 7/377 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPA---STRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL      L + T +HA+ L   L  +       T L++ YA+   L  +  VF     
Sbjct: 208 LPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV 267

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEK 116
            +   W+ LI  ++  +   E+  L+  M+ E    +S     S LR C+SL DL  G +
Sbjct: 268 RNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ 327

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  + K G   D     S+L  Y + G +++A  +FD++  +D +S+ ++++ Y  N  
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGK 387

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E   +F  M    V+PD  TM+SL  AC  L +L+  R  HG V+ R + ++  + NS
Sbjct: 388 AEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNS 447

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY+KCG +  + + F K+  R   SW  MI+ Y   G  ++A   F+ M     EP+
Sbjct: 448 LIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPD 507

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKV 355
            +T I ++ +C+  G + EGK     +  K G+ P  ++    +++  A  G + E  + 
Sbjct: 508 DVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY-ICMVDLLARGGFLDEAYQF 566

Query: 356 IHAIG-ERNILSWNMLI 371
           I ++  + ++  W  L+
Sbjct: 567 IQSMPLKADVRVWGALL 583


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/614 (34%), Positives = 335/614 (54%), Gaps = 16/614 (2%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS--EGLKMFHSMVREGVEPDFVTMLS 201
           G L  A  +FD++ S DV +++ +I +Y  ++  +  +GL ++  M+R  V P+  T   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
             +AC  L      R+IH H +   ++ D  +  + + MY KC  L  A   F  +  R 
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 262 TTSWTAMISCYNRSGWFQKALESFV--KMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
             +W AM++ Y   G +  A+   +  +M   +  PN  TL+ +L   A  G L +G SV
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 320 HCQIIRKGMGPEYD---------YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           H   IR  + P  +          LG AL++ YA+CG +    +V  A+  RN ++W+ L
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 371 ISEYARKGMSKEALELLVQMQTWGL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           I  +       +A  L   M   GL      S+AS+L AC ++  L++G Q+H  + K  
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 430 CKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              +    +SL+ MY+K G  + A  LF+ +  K  V +++++ G+ QNG + EA  +F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M    +E D  T ++ I ACS++  L+ G+  H  +I  G+  +  I  AL DMYAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  +++VF+ M  R++VSW+ MI  YG+HG   +A +LF +M + G  P+ VTF+ +L 
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 609 ACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSHSG V EGK +F+ M   +G+ P ++HY CMVDLLSR G ++ A++ I SMP  A+ 
Sbjct: 551 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            +W ALL  CR++K ID+ K + + +   G    G + LLSNIY+  G +DE  +VR I 
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670

Query: 728 EVTGLKKVPGYSTI 741
           +V G KK PG S I
Sbjct: 671 KVQGFKKSPGCSWI 684



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 275/552 (49%), Gaps = 27/552 (4%)

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN--FFEESILLYHKMIREQATISNFIYPS 100
           G L  +  +FD    PD   +  LI+ Y  ++     + + LY +M+R +   +N+ +P 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
            L+ACS+L D   G  +H   I  G   D  + T++L  Y +  CL DA  +F  M +RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 161 VVSWSSIIASYFDNA----DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
           +V+W++++A Y  +      V+  L M   M R  + P+  T+++L     +  +L    
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALAQGT 248

Query: 217 SIHGHVLR--------RKIKI-DGP-LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
           S+H + +R         K K+ DG  LG + + MY+KCG LL A R F  +  R   +W+
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 267 AMISCYNRSGWFQKALESFVKMLEVK---EEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           A+I  +       +A   F  ML        P   ++ + L +CA L  LR G+ +H  +
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALL 366

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
            + G+  +    G +L+  YA+ G + +   +   +  ++ +S++ L+S Y + G ++EA
Sbjct: 367 AKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDM 442
             +  +MQ   + PD+ ++ S + AC ++ +LQ G   HG VI      E  + ++LIDM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y+KCG  +L+  +F  +  + +V WN+MI G+  +G   EA  LF +M       D VTF
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545

Query: 503 LTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           +  + ACS+ G + +GK W H     YG+   +     + D+ ++ G L  A     SM 
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605

Query: 562 ER-NVVSWSAMI 572
            R +V  W A++
Sbjct: 606 LRADVRVWVALL 617



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 189/387 (48%), Gaps = 20/387 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPAS----------TRLIESYAEMGSLRSSRL 50
           +PL      L + T +HA+ +   LH +  +           T L++ YA+ GSL  +R 
Sbjct: 235 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYP----SVLRACS 106
           VFD     +   W+ LI  ++  +   ++ LL+  M+ +      F+ P    S LRAC+
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC---FLSPTSIASALRACA 351

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           SL  L  GE++H  + K G   D     S+L  Y + G +D A  +FD+M  +D VS+S+
Sbjct: 352 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 411

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           +++ Y  N    E   +F  M    VEPD  TM+SL  AC  L +L+  R  HG V+ R 
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           +  +  + N+ I MY+KCG +  + + F  +  R   SW  MI+ Y   G  ++A   F+
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEFYAE 345
           +M  +   P+ +T I +L +C+  G + EGK   H      G+ P  ++    +++  + 
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY-ICMVDLLSR 590

Query: 346 CGKMSECEKVIHAIGER-NILSWNMLI 371
            G + E  + I ++  R ++  W  L+
Sbjct: 591 GGFLDEAYEFIQSMPLRADVRVWVALL 617


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/711 (30%), Positives = 374/711 (52%), Gaps = 4/711 (0%)

Query: 34  RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           +L+  Y + GSL  +  VFD   +  +F W  +I  Y+ N     ++ LY  M  E   +
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
               +P++L+AC+ L D+ SG ++H  ++K G+     I  +++  Y +   L  AR++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240

Query: 154 DKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           D    + D V W+SI++SY  +    E L++F  M   G  P+  T++S   AC      
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300

Query: 213 RPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           +  + IH  VL+      +  + N+ I MY++CG +  AER   ++      +W ++I  
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y ++  +++ALE F  M+    + + +++ +++ +   L  L  G  +H  +I+ G    
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G  LI+ Y++C       +    + +++++SW  +I+ YA+     EALEL   + 
Sbjct: 421 LQ-VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
              +  D   + S L A   + S+ +  +IH H+++    D  +Q+ L+D+Y KC     
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +FE I+ K VV W SMI     NGN  EA+ LF +M    L  D V  L  + A ++
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  L KG+ +H  L+  G   +  I  A+ DMYA CGDLQ+A+ VFD +  + ++ +++M
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFG 630
           I+ YGMHG    A  LF +M    + P+ ++F+ +L+ACSH+G ++EG+ +   M   + 
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           +EP  +HY C+VD+L R+  +  AF+ +  M       +W ALL  CR H   ++ +   
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAA 779

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + L      + G   L+SN++AE+G W++  KVR+ M+ +G++K PG S I
Sbjct: 780 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 159/521 (30%), Positives = 274/521 (52%), Gaps = 8/521 (1%)

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC--GFDKDDVIQTSILCTYGEFGCLD 147
            + +  F Y  VL  C     +  G ++H RI K    F+ D  +   ++  YG+ G LD
Sbjct: 77  NSPVEAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLD 133

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA KVFD+M  R   +W+++I +Y  N + +  L ++ +M  EGV     +  +L +AC 
Sbjct: 134 DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 193

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWT 266
           +L  +R    +H  +++      G + N+ + MY+K  DL +A R F    EK     W 
Sbjct: 194 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           +++S Y+ SG   + LE F +M      PN  T+++ L +C G  + + GK +H  +++ 
Sbjct: 254 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 313

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                  Y+  ALI  Y  CGKM + E+++  +   ++++WN LI  Y +  M KEALE 
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSK 445
              M   G   D  S+ S ++A G + +L  G+++H +VIK        V ++LIDMYSK
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C         F R+  K ++ W ++I G+ QN   +EA+ LF  +    +E+DE+   + 
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++A S +  +   K +H  ++  G+  D  I   L D+Y KC ++  A RVF+S+  ++V
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 552

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           VSW++MI    ++G  ++A  LF++M+++G+  + V  + I
Sbjct: 553 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 270/523 (51%), Gaps = 8/523 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C  LR +   + LH+ L+  G H        L+  YA+   L ++R +FD F+E  
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D+ +W  ++  Y  +    E++ L+ +M       +++   S L AC        G+++H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307

Query: 119 GRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
             ++K      ++ +  +++  Y   G +  A ++  +M + DVV+W+S+I  Y  N   
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L+ F  M+  G + D V+M S+  A G L +L     +H +V++     +  +GN+ 
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKC       R F+++  +   SWT +I+ Y ++    +ALE F  + + + E + 
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           + L ++L + + L  +   K +HC I+RKG+      +   L++ Y +C  M    +V  
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFE 545

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +I  ++++SW  +IS  A  G   EA+EL  +M   GL  DS ++   LSA  ++ +L  
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 605

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH ++++   C +  +  +++DMY+ CG    A  +F+RI++K ++ + SMI  +  
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           +G    A+ LF +M    +  D ++FL  + ACS+ G L++G+
Sbjct: 666 HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 708



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
           + A  L  CG   ++  G Q+H  + K     + +F+   L+ MY KCG  + A  +F+ 
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  ++   WN+MI  +  NG    A+ L+  M +  + +   +F   ++AC+ +  +  G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGM 577
             +H  L+  G     +I  AL  MYAK  DL  A+R+FD   E+ + V W++++  Y  
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
            G+  +   LF++M  +G  PN  T ++ L AC      + GK   +A  +       + 
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK-EIHASVLKSSTHSSEL 320

Query: 638 YAC--MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           Y C  ++ + +R G +  A +++  M   A+   W +L+ G
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG 360


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/711 (30%), Positives = 374/711 (52%), Gaps = 4/711 (0%)

Query: 34  RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           +L+  Y + GSL  +  VFD   +  +F W  +I  Y+ N     ++ LY  M  E   +
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
               +P++L+AC+ L D+ SG ++H  ++K G+     I  +++  Y +   L  AR++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240

Query: 154 DKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           D    + D V W+SI++SY  +    E L++F  M   G  P+  T++S   AC      
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300

Query: 213 RPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           +  + IH  VL+      +  + N+ I MY++CG +  AER   ++      +W ++I  
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y ++  +++ALE F  M+    + + +++ +++ +   L  L  G  +H  +I+ G    
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G  LI+ Y++C       +    + +++++SW  +I+ YA+     EALEL   + 
Sbjct: 421 LQ-VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
              +  D   + S L A   + S+ +  +IH H+++    D  +Q+ L+D+Y KC     
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +FE I+ K VV W SMI     NGN  EA+ LF +M    L  D V  L  + A ++
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  L KG+ +H  L+  G   +  I  A+ DMYA CGDLQ+A+ VFD +  + ++ +++M
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFG 630
           I+ YGMHG    A  LF +M    + P+ ++F+ +L+ACSH+G ++EG+ +   M   + 
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           +EP  +HY C+VD+L R+  +  AF+ +  M       +W ALL  CR H   ++ +   
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAA 779

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + L      + G   L+SN++AE+G W++  KVR+ M+ +G++K PG S I
Sbjct: 780 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 159/521 (30%), Positives = 274/521 (52%), Gaps = 8/521 (1%)

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC--GFDKDDVIQTSILCTYGEFGCLD 147
            + +  F Y  VL  C     +  G ++H RI K    F+ D  +   ++  YG+ G LD
Sbjct: 77  NSPVEAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLD 133

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA KVFD+M  R   +W+++I +Y  N + +  L ++ +M  EGV     +  +L +AC 
Sbjct: 134 DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 193

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWT 266
           +L  +R    +H  +++      G + N+ + MY+K  DL +A R F    EK     W 
Sbjct: 194 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           +++S Y+ SG   + LE F +M      PN  T+++ L +C G  + + GK +H  +++ 
Sbjct: 254 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 313

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                  Y+  ALI  Y  CGKM + E+++  +   ++++WN LI  Y +  M KEALE 
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSK 445
              M   G   D  S+ S ++A G + +L  G+++H +VIK        V ++LIDMYSK
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C         F R+  K ++ W ++I G+ QN   +EA+ LF  +    +E+DE+   + 
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++A S +  +   K +H  ++  G+  D  I   L D+Y KC ++  A RVF+S+  ++V
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 552

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           VSW++MI    ++G  ++A  LF++M+++G+  + V  + I
Sbjct: 553 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 270/523 (51%), Gaps = 8/523 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C  LR +   + LH+ L+  G H        L+  YA+   L ++R +FD F+E  
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D+ +W  ++  Y  +    E++ L+ +M       +++   S L AC        G+++H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307

Query: 119 GRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
             ++K      ++ +  +++  Y   G +  A ++  +M + DVV+W+S+I  Y  N   
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L+ F  M+  G + D V+M S+  A G L +L     +H +V++     +  +GN+ 
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKC       R F+++  +   SWT +I+ Y ++    +ALE F  + + + E + 
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           + L ++L + + L  +   K +HC I+RKG+      +   L++ Y +C  M    +V  
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFE 545

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +I  ++++SW  +IS  A  G   EA+EL  +M   GL  DS ++   LSA  ++ +L  
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 605

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH ++++   C +  +  +++DMY+ CG    A  +F+RI++K ++ + SMI  +  
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           +G    A+ LF +M    +  D ++FL  + ACS+ G L++G+
Sbjct: 666 HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 708



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
           + A  L  CG   ++  G Q+H  + K     + +F+   L+ MY KCG  + A  +F+ 
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  ++   WN+MI  +  NG    A+ L+  M +  + +   +F   ++AC+ +  +  G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGM 577
             +H  L+  G     +I  AL  MYAK  DL  A+R+FD   E+ + V W++++  Y  
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
            G+  +   LF++M  +G  PN  T ++ L AC      + GK   +A  +       + 
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK-EIHASVLKSSTHSSEL 320

Query: 638 YAC--MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           Y C  ++ + +R G +  A +++  M   A+   W +L+ G
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG 360



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 160/385 (41%), Gaps = 44/385 (11%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +  +H H+L  GL  D      L++ Y +  ++  +  VF++ K  D   W  +I     
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N    E++ L+ +M+    +  +     +L A +SL  L  G ++H  +++ GF  +  I
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y   G L  A+ VFD++  + ++ ++S+I +Y  +      +++F  M  E V
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG--DLLSA 250
            PD ++ L+L  AC     L   R     ++  + +++ P    ++ +    G  + +  
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFL-KIMEHEYELE-PWPEHYVCLVDMLGRANCVVE 742

Query: 251 ERTFVKIEKRCTTS--WTAMI-SCYNRSG------WFQKALESFVKMLEVKEEPNLITLI 301
              FVK+ K   T+  W A++ +C + S         Q+ LE     LE K   NL+ + 
Sbjct: 743 AFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE-----LEPKNPGNLVLVS 797

Query: 302 TVLGSCA---------------------GLGWLREGKSVHCQIIRKGMGPE----YDYLG 336
            V                          G  W+     VH    R    PE    Y+ L 
Sbjct: 798 NVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 857

Query: 337 PALIEFYAECGKMSECEKVIHAIGE 361
               +   E G +++ + V+H + E
Sbjct: 858 EVTRKLEREVGYVADTKFVLHNVDE 882


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/661 (31%), Positives = 371/661 (56%), Gaps = 13/661 (1%)

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD-----VIQTSILCTYGEFG 144
           QA IS     ++L ACS L  L  G++VHG +++    +D+     +++  ++  Y   G
Sbjct: 7   QAEIS--ACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCG 64

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS-LA 203
           C D A  VFD+M  ++VV+W+S+I+++       + + +F  M+  GV PD +T  S L 
Sbjct: 65  CTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILL 124

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +  G   +L   + +H H+++   + D  + N  + MY KCGD+  A   F  I+     
Sbjct: 125 KWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVF 184

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SWT +I+ Y ++G   + L    +M +   +P+  T  TVLG+C  +G L E K +H   
Sbjct: 185 SWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAAT 244

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I          +G ALI  Y +CG + E   V   I  ++I+SW+ +I+ +A+ G +K A
Sbjct: 245 ISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSA 304

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDM 442
           ++LL+ M   G+ P++ +  + L A  ++ + Q G +IH  +++    D+  + S+L+ M
Sbjct: 305 IQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKM 364

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y   G+   A  +FE  +++ VV W+SMI G+ QN +   A++LF +M ++ ++ + VTF
Sbjct: 365 YCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTF 424

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           ++AI AC+ +G L +G  +H ++   G+ KD+ + TAL ++Y KCG L+ A+ VF  M +
Sbjct: 425 VSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKK 484

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           +N+++W+++   YG +G  + +  L   M   G+KP+ + F+ IL +C+++G + +G  Y
Sbjct: 485 KNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHY 544

Query: 623 FNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           +N M + FG+ P ++H  CMVD+L R+G +E A ++I++M F ++ + W  LL  C+ H 
Sbjct: 545 YNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLTACKAHN 603

Query: 682 RI-DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
                 +  EK   +   N    Y LLS+++   G+W+   + R  M+  G++++ G S+
Sbjct: 604 DTARAARAAEKIFQLEPKNATP-YVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSS 662

Query: 741 I 741
           I
Sbjct: 663 I 663



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 160/613 (26%), Positives = 312/613 (50%), Gaps = 17/613 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIES-----YAEMGSLRSSRLVFDT 54
           +  +C++LR L    R+H  ++   L  D      L+E+     Y   G    +  VFD 
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 55  FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSL-GDLGS 113
            K+ +   W  LI  + +   F ++++L+ KM+    +     + S+L   S    +L  
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G++VH  I++ G++ D ++   ++  YG+ G ++ A  VFD +   +V SW+ IIA+Y  
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGP 232
           N    E L++   M + GV+PD  T  ++  AC  + +L  A+ +H   +    +  D  
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAA 255

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +G + I +Y KCG L  A   FV+I+ +   SW++MI+ + +SG  + A++  + M    
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG 315

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             PN +T + VL +   L   + GK +H +I++ G   +   L  AL++ Y   G +   
Sbjct: 316 VRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV-CLTSALVKMYCNWGWVETA 374

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             +  +  ER+++SW+ +I+ Y++      AL L  +M+  G+ P+S +  S++ AC  V
Sbjct: 375 RSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGV 434

Query: 413 GSLQLGLQIHGHV--IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           G+L+ G Q+H  V  + +D KD  V ++L+++Y KCG    A  +F  +++K+++ W S+
Sbjct: 435 GALRRGTQLHERVRCLGLD-KDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSI 493

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YG 529
              + QNG+   ++ L H M L  ++ D + F+  + +C+  GQ+ KG   ++ +   +G
Sbjct: 494 AMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFG 553

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +   +     + D+  + G L+ A+++ ++M   + ++W  ++     H     AA   +
Sbjct: 554 IAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAE 613

Query: 590 QMLDSGIKPNEVT 602
           ++    ++P   T
Sbjct: 614 KIFQ--LEPKNAT 624



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 152/478 (31%), Positives = 254/478 (53%), Gaps = 23/478 (4%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID-----GPLGNSFIVMYSKCGD 246
           ++ +     ++  AC +L +L   + +HG V+R  +  D       L N  I MY +CG 
Sbjct: 6   IQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGC 65

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
              A   F +++ +   +WT++IS +  +G F  A+  F KML     P+ IT  ++L  
Sbjct: 66  TDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSIL-- 123

Query: 307 CAGLGW------LREGKSVHCQIIRKGMGPEYDYLGPALI-EFYAECGKMSECEKVIHAI 359
              L W      L EGK VH  I++ G   E D +   L+ E Y +CG + +   V  +I
Sbjct: 124 ---LKWSGRERNLDEGKRVHSHIMQTGY--EGDRMVMNLVVEMYGKCGDVEQAGNVFDSI 178

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            + N+ SW ++I+ YA+ G   E L LL +M   G+ PD ++  + L AC  VG+L+   
Sbjct: 179 QDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAK 238

Query: 420 QIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            +H   I    +D +D  V ++LI++Y KCG    A+ +F +I  K +V W+SMI  F Q
Sbjct: 239 ILHAATISSTGLD-RDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQ 297

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G +  AI L   M L  +  + VTF+  ++A +++   + GK +H +++  G   D+ +
Sbjct: 298 SGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCL 357

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +AL  MY   G ++TA+ +F+S  ER+VVSWS+MI  Y  +     A SLF++M   G+
Sbjct: 358 TSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGV 417

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           +PN VTF++ + AC+  G++  G      +R  G++ D+     +V+L  + G +E A
Sbjct: 418 QPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 150/274 (54%), Gaps = 8/274 (2%)

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSL-----IDMY 443
           M+   +  +  + A+ L+AC ++ +L  G ++HG V++    +DE    SL     I MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
            +CG  +LA  +F+R++ ++VV W S+I  F   G+  +A+ LF +M L+ +  D +TF 
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 504 TAIQACSNIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           + +   S   + L++GK VH  ++  G   D  +   + +MY KCGD++ A  VFDS+ +
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
            NV SW+ +I  Y  +G   +   L  +M  +G+KP+  TF  +L AC+  G++EE K  
Sbjct: 181 PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKIL 240

Query: 623 FNA-MRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
             A +   G++ D      +++L  + G +E AF
Sbjct: 241 HAATISSTGLDRDAAVGTALINLYGKCGALEEAF 274


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 228/728 (31%), Positives = 370/728 (50%), Gaps = 17/728 (2%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           G   D  A   +I +Y  +G L+ +RL+F     PD   W V+I  +        +I  +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M +     +     SVL A   + +L  G  VH   IK G   +  + +S++  Y + 
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
             ++ A KVF+ +  ++ V W+++I  Y  N +  + +++F  M   G   D  T  SL 
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
             C     L      H  ++++K+  +  +GN+ + MY+KCG L  A + F ++  R   
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           +W  +I  Y +     +A + F +M       +   L + L +C  +  L +GK VHC  
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           ++ G+  +  + G +LI+ Y++CG + +  KV  ++ E +++S N LI+ Y++  + +EA
Sbjct: 556 VKCGLDRDL-HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEA 613

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLID 441
           + L  +M T G+ P   + A+ + AC    SL LG Q HG + K     + E++  SL+ 
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673

Query: 442 MY-SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           MY +  G      L  E    KS+V+W  M+ G  QNG   EA+  + +M  + +  D+ 
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TF+T ++ CS +  L +G+ +H  +       D      L DMYAKCGD++ + +VFD M
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793

Query: 561 SER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
             R NVVSW+++I+ Y  +G   DA  +F  M  S I P+E+TF+ +L ACSH+G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853

Query: 620 KFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
           +  F  M   +G+E  + H ACMVDLL R G ++ A   I +     +  +W +LL  CR
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913

Query: 679 IH-----KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           IH       I   K IE E       ++  Y LLSNIYA +G W++   +R +M   G+K
Sbjct: 914 IHGDDIRGEISAEKLIELE-----PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968

Query: 734 KVPGYSTI 741
           KVPGYS I
Sbjct: 969 KVPGYSWI 976



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 179/678 (26%), Positives = 320/678 (47%), Gaps = 41/678 (6%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MP  R    LR    +H+  L+ G+  +      +++ YA+   +  +   FD F E D 
Sbjct: 68  MPQ-RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDV 125

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  Y       + +  +  +   Q   + F +  VL  C+   ++  G ++H  
Sbjct: 126 TAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCS 185

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +IK G +++     +++  Y +   + DAR+VF+ +   + V W+ + + Y       E 
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEA 245

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M  EG  PD +  +++                                   I  
Sbjct: 246 VLVFERMRDEGHRPDHLAFVTV-----------------------------------INT 270

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y + G L  A   F ++      +W  MIS + + G    A+E F  M +   +    TL
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            +VL +   +  L  G  VH + I+ G+     Y+G +L+  Y++C KM    KV  A+ 
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGSSLVSMYSKCEKMEAAAKVFEALE 389

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E+N + WN +I  YA  G S + +EL + M++ G   D F+  S LS C     L++G Q
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449

Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
            H  +IK    K+ FV ++L+DMY+KCG    A  +FER+  +  V WN++I  + Q+ N
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             EA +LF +M L  +  D     + ++AC+++  L +GK VH   +  G+ +D++  ++
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L DMY+KCG ++ A++VF S+ E +VVS +A+I  Y     L +A  LF++ML  G+ P+
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPS 628

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA-CMVDLLSRSGDIEGAFKMI 658
           E+TF  I+ AC    S+  G  +   +   G   + ++    ++ +   S  +  A  + 
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688

Query: 659 HSMPFPANGSIWGALLNG 676
             +  P +  +W  +++G
Sbjct: 689 SELSSPKSIVLWTGMMSG 706



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 294/569 (51%), Gaps = 6/569 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +  GL  +    + L+  Y++   + ++  VF+  +E +   W  +I+ Y  N  
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             + + L+  M      I +F + S+L  C++  DL  G + H  IIK    K+  +  +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L+DAR++F++M  RD V+W++II SY  + + SE   +F  M   G+  D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S  +AC  +  L   + +H   ++  +  D   G+S I MYSKCG +  A + F 
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +    S  A+I+ Y+++   ++A+  F +ML     P+ IT  T++ +C     L  
Sbjct: 589 SLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE-CEKVIHAIGERNILSWNMLISEY 374
           G   H QI ++G   E +YLG +L+  Y     M+E C         ++I+ W  ++S +
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
           ++ G  +EAL+   +M+  G++PD  +  + L  C  + SL+ G  IH  +  +    DE
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              ++LIDMY+KCG    +  +F+ ++++S VV WNS+I G+ +NG + +A+ +F  M  
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQ 551
           + +  DE+TFL  + ACS+ G++  G+ +   +I  YG+   +     + D+  + G LQ
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 887

Query: 552 TAQRVFDSMSER-NVVSWSAMIDCYGMHG 579
            A    ++ + + +   WS+++    +HG
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHG 916



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 159/349 (45%), Gaps = 21/349 (6%)

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYS 444
           +L    + +  MP   ++A  +    +  SL LG+   G +           ++++D+Y+
Sbjct: 57  KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRL----------GNAIVDLYA 106

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KC   + A   F+ ++ K V  WNSM+  +   G   + +  F  ++ N +  ++ TF  
Sbjct: 107 KCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI 165

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +  C+    +E G+ +H  +I  G+ ++ Y   AL DMYAKC  +  A+RVF+ + + N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            V W+ +   Y   G   +A  +F++M D G +P+ + F+ ++      G +++ +  F 
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFG 285

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSG----DIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            M      PD+  +  M+    + G     IE  F M  S    +  S  G++L+   I 
Sbjct: 286 EMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAIGIV 340

Query: 681 KRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEGNWDEFGKVRSIME 728
             +D+   +  E    G   N Y  + L ++Y++    +   KV   +E
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 6/176 (3%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + R C+   +LR+   +H+ +       D   S  LI+ YA+ G ++ S  VFD  + 
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR 795

Query: 58  PDSFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             + + W  LI  Y  N + E+++ ++  M +         +  VL ACS  G +  G K
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRK 855

Query: 117 VHGRII-KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
           +   +I + G +        ++   G +G L +A    +    + D   WSS++ +
Sbjct: 856 IFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/652 (32%), Positives = 357/652 (54%), Gaps = 9/652 (1%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           I NF+  S+LR  S   +L   +  H +II      D  + T ++  Y +   L+ AR V
Sbjct: 31  IHNFL--SLLRESSK--NLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYV 86

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD+      +  ++++  Y  +    E L++F  M    +E D  +     +AC      
Sbjct: 87  FDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDY 146

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                I    + + ++ +  +G+S I    K G +  A+R F  +  +    W ++I  Y
Sbjct: 147 EMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGY 206

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            ++G F  A + F +M     +P+ IT+ +++ +C G+G L+ GK +H  ++  G+G + 
Sbjct: 207 VQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDI 266

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             L  + ++ Y++ G +     V + +  RN++SWN +IS   R G+  E+ +L  ++  
Sbjct: 267 LVL-TSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVR 325

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLA 452
                D  ++ S L  C    SL  G  +HG  I+    +  + ++++D+YSKCG    A
Sbjct: 326 SSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQA 385

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F R++ ++V+ W +M+ G  QNG++ +A+ LF QM    +  + VTF++ + +C+++
Sbjct: 386 TFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHL 445

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAM 571
           G L++G+ +H  L   G   DI   TAL DMYAKCG +  A+R+F   S  ++VV W++M
Sbjct: 446 GSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSM 505

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
           I  YGMHG    A  ++ +M++ G+KPN+ TF+++L ACSHS  VE+G   FN+M R   
Sbjct: 506 ITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHN 565

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV-MKTI 689
           + P  +HYAC+VDLLSR+G  E A  +I  MPF    ++  ALL+GCR HK I++ ++T 
Sbjct: 566 IRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTS 625

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +K L++   N  G Y +LSNIYAE   WD+   +R +M   GLKK PGYS +
Sbjct: 626 DKLLALDAMNP-GIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLV 676



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/561 (29%), Positives = 306/561 (54%), Gaps = 5/561 (0%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  S  NL  +   HA ++   L  D   +T+L+++Y+++ SL ++R VFD F +P   +
Sbjct: 38  LRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLL 97

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
              ++  Y+ +  + E++ L+  M      + +      L+AC+S  D   G ++    +
Sbjct: 98  CNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAV 157

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G +K+  + +S++    +FG + +A++VFD M ++DVV W+SII  Y          +
Sbjct: 158 EKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQ 217

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M   G++P  +TM SL +ACG + +L+  + +HG+VL   +  D  +  SF+ MYS
Sbjct: 218 LFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYS 277

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           K GD+ SA   F K+  R   SW AMIS   R+G   ++ + F +++      +L T+++
Sbjct: 278 KMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L  C+    L  GK +H   IR         L  A+++ Y++CG + +   V + + +R
Sbjct: 338 LLQGCSQTASLATGKILHGCAIRS--FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDR 395

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           N+++W  ++   A+ G +++AL L  QMQ  G+  +S +  S + +C ++GSL+ G  IH
Sbjct: 396 NVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIH 455

Query: 423 GHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNS 480
           GH+ ++    + V  ++L+DMY+KCG  NLA  +F      K VV+WNSMI G+  +G+ 
Sbjct: 456 GHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHG 515

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTA 539
            +A+ ++H+M    L+ ++ TFL+ + ACS+   +E+G  + + +   + +R        
Sbjct: 516 YQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYAC 575

Query: 540 LTDMYAKCGDLQTAQRVFDSM 560
           L D+ ++ G  + AQ + + M
Sbjct: 576 LVDLLSRAGRFEEAQALIEKM 596


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/635 (33%), Positives = 359/635 (56%), Gaps = 13/635 (2%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
            +++H  ++  G  +   +   ++  Y   G +  AR  FD++ ++DV +W+S+I++Y  
Sbjct: 59  AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118

Query: 174 NADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
                  +  F+  +    ++ D  T   +  ACG   +L   R +H  VL+   + D  
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACG---NLDDGRKVHCLVLKLGFECDVY 175

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +  SFI  YS+ G +  A   F  +  R   +W AMIS +  +G   +ALE F +M    
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSE 351
              + +T+ ++L  C  L  +  G  +H   I+ G+  E+D ++  ALI  YA+ G++  
Sbjct: 236 VSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGL--EFDLFVCNALINMYAKFGELRS 293

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            E + + +  R+I+SWN L++ + +      AL +  +M + G++PD  ++ S  S    
Sbjct: 294 AETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAE 353

Query: 412 VGSLQLGLQIHGHVIKIDC---KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
           +G+      IHG V +  C    D  + +++IDMY+K GF + A  +FE +  K V+ WN
Sbjct: 354 LGNFLSSRSIHGFVTR-RCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWN 412

Query: 469 SMICGFYQNGNSLEAINLFHQM-YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           S+I G+ QNG + EAI+++  M Y +    ++ T+++ + A S +G L++G   H +LI 
Sbjct: 413 SLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIK 472

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
             +  DI++ T L DMY KCG L  A  +F  +  ++ VSW+A+I C+G+HG    A  L
Sbjct: 473 NFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKL 532

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLS 646
           FK+M   G+KP+ +TF+++L ACSHSG V+EG++ F  M+  +G+ P L+HY CMVDL  
Sbjct: 533 FKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFG 592

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R+G +E AF  + +MP   + S+WGALL  CRIH+ +++++T+   L    + + GYY L
Sbjct: 593 RAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVL 652

Query: 707 LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           LSNIYA+ G+W+   +VRS+    GLKK PG+S+I
Sbjct: 653 LSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSI 687



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 176/581 (30%), Positives = 313/581 (53%), Gaps = 8/581 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +F  CT +    +LHA L+V+G       S +LI  YA +G +  +RL FD  +  D + 
Sbjct: 49  IFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYT 108

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I  Y     F  ++  +++ +      S+ + +P V+RAC   G+L  G KVH  +
Sbjct: 109 WNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLV 165

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K GF+ D  I  S +  Y  FG +  A  +FD M  RD+ +W+++I+ ++ N  V+E L
Sbjct: 166 LKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEAL 225

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  M  + V  D VT+ SL   C +L  +     IH + ++  ++ D  + N+ I MY
Sbjct: 226 EVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMY 285

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +K G+L SAE  F +++ R   SW ++++ + ++     AL  + KM  +   P+L+TL+
Sbjct: 286 AKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLV 345

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++    A LG     +S+H  + R+        LG A+I+ YA+ G +    KV   +  
Sbjct: 346 SLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPV 405

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQ 420
           ++++SWN LI+ Y++ G++ EA+++   M+ + G +P+  +  S L+A   +G+L+ G++
Sbjct: 406 KDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMK 465

Query: 421 IHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
            HG +IK     D FV + L+DMY KCG    A  LF  +  +S V WN++I     +G 
Sbjct: 466 AHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGY 525

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDT 538
            L+A+ LF +M    ++ D +TF++ + ACS+ G +++G+W    +  +YG+R  +    
Sbjct: 526 GLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYG 585

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMH 578
            + D++ + G L+ A     +M  R  VS W A++    +H
Sbjct: 586 CMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIH 626



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 250/487 (51%), Gaps = 16/487 (3%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ R+C NL    ++H  +L  G   D   +   I  Y+  G +  +  +FD     D  
Sbjct: 147 PVIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIG 206

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  +  N    E++ ++ +M  +  ++ +    S+L  C  L D+ SG  +H   
Sbjct: 207 TWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYA 266

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK G + D  +  +++  Y +FG L  A  +F++M  RD+VSW+S++A++  N      L
Sbjct: 267 IKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIAL 326

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVM 240
            +++ M   GV PD +T++SLA    EL +   +RSIHG V RR   + D  LGN+ I M
Sbjct: 327 GVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDM 386

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLIT 299
           Y+K G + SA + F  +  +   SW ++I+ Y+++G   +A++ +  M       PN  T
Sbjct: 387 YAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGT 446

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA 358
            +++L + + LG L++G   H Q+I+  +   +D ++   L++ Y +CGK+++   + + 
Sbjct: 447 WVSILTAHSQLGALKQGMKAHGQLIKNFL--YFDIFVSTCLVDMYGKCGKLADALSLFYE 504

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++ +SWN +IS +   G   +A++L  +MQ+ G+ PD  +  S LSAC + G +  G
Sbjct: 505 VPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEG 564

Query: 419 -----LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI- 471
                L    + I+   K       ++D++ + G    A+   + +  +  V +W +++ 
Sbjct: 565 QWCFQLMQETYGIRPSLKH---YGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLG 621

Query: 472 -CGFYQN 477
            C  ++N
Sbjct: 622 ACRIHEN 628


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/646 (32%), Positives = 356/646 (55%), Gaps = 6/646 (0%)

Query: 99  PSVLRACSSLGD-LGSGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFDKM 156
           P+  R+   + + L  G+ VH   +       + I  +++ + + +FG L  AR++FD M
Sbjct: 41  PNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGM 100

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R  VSW+ +I  Y  +    E  +++  M R G+EPD+VT+++L    GEL +     
Sbjct: 101 VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIV 160

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            IH HV++   + +  + NS +  Y K   L  A + F  +  + T ++ ++++ Y+  G
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEG 220

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             ++A+E F+++     +P+  T   +L +  GL   + G+ VH  +++        ++G
Sbjct: 221 LNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNV-FVG 279

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL+++Y++  ++ E  K+ + + E + +S+N++I+ YA  G  KE+ +L  ++Q     
Sbjct: 280 NALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
              F  A+ LS   +  +L++G QIH   I +    E  V+++L+DMY+KC     A  +
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKI 399

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ I  KS V W +MI  + Q G   E IN+F  M    +  D+ TF + ++AC+N+  +
Sbjct: 400 FDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASI 459

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             G+ +H  LI  G   ++Y  +AL D YAKCG +  A + F  M ERN VSW+A+I  Y
Sbjct: 460 SLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAY 519

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             +G ++   + F+QM+ SG KP+ V+F+++L ACSH G VEE  ++FN+M +I+ V P 
Sbjct: 520 AQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPK 579

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL- 693
            +HY  MVD+L R+G  + A K++  MPF  +  +W ++LN CRIHK  ++ K     L 
Sbjct: 580 REHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLF 639

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++    D   Y  +SNIYA  G WD   KV+  M   G++KVP YS
Sbjct: 640 NMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYS 685



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 283/573 (49%), Gaps = 17/573 (2%)

Query: 16  LHAHLLVTGLHYDPPAST----RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +HAH +   +   P  +T     +I  + + G L  +R +FD   E  +  W +LI  Y+
Sbjct: 60  VHAHQVFDQM---PAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE---KVHGRIIKCGFDK 128
            +N  +E+  LY  M R         Y +++   S  G+L +     ++H  +IK G++ 
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           + ++  S++  Y +  CL  A ++F  M ++D V+++S++  Y +     E +++F  + 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G++P   T  +L  A   L   +  + +HG VL+     +  +GN+ +  YSK   + 
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
              + F ++ +    S+  +I+ Y  +G F+++ + F K+   + +       T+L    
Sbjct: 294 EVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               LR G+ +HCQ I  G   E   +  AL++ YA+C    E +K+   I  ++ + W 
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFE-SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWT 412

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +IS Y +KG  +E + +   M+  G+  D  + AS L AC N+ S+ LG Q+H  +I+ 
Sbjct: 413 AMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRS 472

Query: 429 D-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               + +  S+L+D Y+KCG    A   F  + +++ V WN++I  + QNGN    +N F
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAK 546
            QM  +  + D V+FL+ + ACS+ G +E+  W  + +   Y V       T++ D+  +
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592

Query: 547 CGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
            G    A+++   M  E + + WS++++   +H
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIH 625



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 226/474 (47%), Gaps = 14/474 (2%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++H H++  G  Y+      L+++Y +   L  +  +F      D+  +  L+  Y  
Sbjct: 159 IVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSN 218

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
               EE+I L+ ++       S+F + ++L A   L D   G++VHG ++K  F  +  +
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             ++L  Y +   +D+  K+F +M   D +S++ +I SY  N    E   +F  +     
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF 338

Query: 193 EP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +     F T+LS+A +     +LR  R IH   +      +  + N+ + MY+KC     
Sbjct: 339 DRRQFPFATLLSIATSS---LNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKE 395

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A++ F  I  + T  WTAMIS Y + G  ++ +  F  M       +  T  ++L +CA 
Sbjct: 396 AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACAN 455

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L  +  G+ +H  +IR G      Y G AL++ YA+CG M++  K    + ERN +SWN 
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNV-YSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNA 514

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL---QIHGHVI 426
           LIS YA+ G     L    QM   G  PDS S  S LSAC + G ++  L        + 
Sbjct: 515 LISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIY 574

Query: 427 KIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMI--CGFYQN 477
           ++  K E   +S++D+  + G F     L+ E   + S +MW+S++  C  ++N
Sbjct: 575 EVTPKREHY-TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKN 627



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 142/574 (24%), Positives = 274/574 (47%), Gaps = 51/574 (8%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
           L L  +     SL     I  H+++     +    N  +  + + GDL+ A + F ++  
Sbjct: 12  LVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPA 71

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLE------------------VKE-------- 293
           + T S   MIS + + G   KA E F  M+E                   KE        
Sbjct: 72  KNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADM 131

Query: 294 -----EPNLITLITVLGSCAGLGWLREGKSV----HCQIIRKGMGPEYDYLG-PALIEFY 343
                EP+ +TL+T+L   +G G L E K+V    H  +I+  +G EY+ +   +L++ Y
Sbjct: 132 RRGGIEPDYVTLVTLL---SGFGEL-ETKNVIVQIHTHVIK--LGYEYNLMVCNSLVDAY 185

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            +   +    ++   +  ++ +++N L++ Y+ +G+++EA+EL +++   G+ P  F+ A
Sbjct: 186 CKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFA 245

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           + LSA   +   + G Q+HG V+K +   + FV ++L+D YSK    +    LF  + + 
Sbjct: 246 ALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPEL 305

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
             + +N +I  +  NG   E+ +LF ++     +  +  F T +   ++   L  G+ +H
Sbjct: 306 DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH 365

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
            + I+ G   +  ++ AL DMYAKC   + AQ++FD+++ ++ V W+AMI  Y   G+  
Sbjct: 366 CQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHE 425

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
           +  ++F  M  +G+  ++ TF +IL AC++  S+  G+   + +   G   ++   + ++
Sbjct: 426 EGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALL 485

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN- 701
           D  ++ G +  A K    MP   N   W AL++    +  +D      +++  +G   + 
Sbjct: 486 DTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDS 544

Query: 702 -GYYTLLSNI----YAEEGNWDEFGKVRSIMEVT 730
             + ++LS      + EE  W  F  +  I EVT
Sbjct: 545 VSFLSVLSACSHCGFVEEALW-HFNSMTQIYEVT 577



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 193/384 (50%), Gaps = 10/384 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +L T   ++      L++ Y++   +     +F    E D   + V+I  Y WN 
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNG 321

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F+ES  L+ K+   +     F + ++L   +S  +L  G ++H + I  G + +  ++ 
Sbjct: 322 QFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN 381

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y +     +A+K+FD +  +  V W+++I++Y       EG+ +F  M R GV  
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPA 441

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T  S+  AC  L S+   R +H  ++R     +   G++ +  Y+KCG +  A ++F
Sbjct: 442 DQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSF 501

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R + SW A+IS Y ++G     L SF +M++   +P+ ++ ++VL +C+  G++ 
Sbjct: 502 GEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVE 561

Query: 315 EGK---SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNML 370
           E     +   QI    + P+ ++   ++++     G+  E EK++  +  E + + W+ +
Sbjct: 562 EALWHFNSMTQIYE--VTPKREHY-TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618

Query: 371 ISE---YARKGMSKEALELLVQMQ 391
           ++    +    ++K+A + L  M+
Sbjct: 619 LNSCRIHKNHELAKKAADRLFNME 642



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 33/302 (10%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  NLR   ++H   +  G +++      L++ YA+    + ++ +FD      +  W  
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y+     EE I ++  M R         + S+LRAC++L  +  G ++H  +I+ G
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  +    +++L TY + GC+ DA K F +M  R+ VSW+++I++Y  N +V   L  F 
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQ 533

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M++ G +PD V+ LS+  AC   C        H               NS   +Y    
Sbjct: 534 QMIQSGYKPDSVSFLSVLSACSH-CGFVEEALWH--------------FNSMTQIYE--- 575

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
             ++ +R            +T+M+    R+G F +A +    M E+  EP+ I   +VL 
Sbjct: 576 --VTPKR----------EHYTSMVDVLCRNGRFDEAEK---LMTEMPFEPSEIMWSSVLN 620

Query: 306 SC 307
           SC
Sbjct: 621 SC 622


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/614 (34%), Positives = 335/614 (54%), Gaps = 16/614 (2%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS--EGLKMFHSMVREGVEPDFVTMLS 201
           G L  A  +FD++ S DV +++ +I +Y  ++  +  +GL ++  M+R  V P+  T   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
             +AC  L      R+IH H +   ++ D  +  + + MY KC  L  A   F  +  R 
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 262 TTSWTAMISCYNRSGWFQKALESFV--KMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
             +W AM++ Y   G +  A+   +  +M   +  PN  TL+ +L   A  G L +G SV
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 320 HCQIIRKGMGPEYD---------YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           H   IR  +    +          LG AL++ YA+CG +    +V  A+  RN ++W+ L
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 371 ISEYARKGMSKEALELLVQMQTWGL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           I  +       +A  L   M   GL      S+AS+L AC ++  L++G Q+H  + K  
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 430 CKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              +    +SL+ MY+K G  + A  LF+ +  K  V +++++ G+ QNG + EA  +F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M    +E D  T ++ I ACS++  L+ G+  H  +I  G+  +  I  AL DMYAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  +++VF+ M  R++VSW+ MI  YG+HG   +A +LF +M + G  P+ VTF+ +L 
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 609 ACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSHSG V EGK +F+ MR  +G+ P ++HY CMVDLLSR G ++ A++ I SMP  A+ 
Sbjct: 551 ACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            +W ALL  CR++K ID+ K + + +   G    G + LLSNIY+  G +DE  +VR I 
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670

Query: 728 EVTGLKKVPGYSTI 741
           +V G KK PG S I
Sbjct: 671 KVQGFKKSPGCSWI 684



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 275/552 (49%), Gaps = 27/552 (4%)

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN--FFEESILLYHKMIREQATISNFIYPS 100
           G L  +  +FD    PD   +  LI+ Y  ++     + + LY +M+R +   +N+ +P 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
            L+ACS+L D   G  +H   I  G   D  + T++L  Y +  CL DA  +F  M +RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 161 VVSWSSIIASYFDNA----DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
           +V+W++++A Y  +      V+  L M   M R  + P+  T+++L     +  +L    
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALAQGT 248

Query: 217 SIHGHVLR--------RKIKI-DGP-LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
           S+H + +R         K K+ DG  LG + + MY+KCG LL A R F  +  R   +W+
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 267 AMISCYNRSGWFQKALESFVKMLEVK---EEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           A+I  +       +A   F  ML        P   ++ + L +CA L  LR G+ +H  +
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALL 366

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
            + G+  +    G +L+  YA+ G + +   +   +  ++ +S++ L+S Y + G ++EA
Sbjct: 367 AKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDM 442
             +  +MQ   + PD+ ++ S + AC ++ +LQ G   HG VI      E  + ++LIDM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y+KCG  +L+  +F  +  + +V WN+MI G+  +G   EA  LF +M       D VTF
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545

Query: 503 LTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           +  + ACS+ G + +GK W H     YG+   +     + D+ ++ G L  A     SM 
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605

Query: 562 ER-NVVSWSAMI 572
            R +V  W A++
Sbjct: 606 LRADVRVWVALL 617



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 191/388 (49%), Gaps = 22/388 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPAS----------TRLIESYAEMGSLRSSRL 50
           +PL      L + T +HA+ +   LH +  +           T L++ YA+ GSL  +R 
Sbjct: 235 LPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYP----SVLRACS 106
           VFD     +   W+ LI  ++  +   ++ LL+  M+ +      F+ P    S LRAC+
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC---FLSPTSIASALRACA 351

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           SL  L  GE++H  + K G   D     S+L  Y + G +D A  +FD+M  +D VS+S+
Sbjct: 352 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 411

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           +++ Y  N    E   +F  M    VEPD  TM+SL  AC  L +L+  R  HG V+ R 
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           +  +  + N+ I MY+KCG +  + + F  +  R   SW  MI+ Y   G  ++A   F+
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG--PEYDYLGPALIEFYA 344
           +M  +   P+ +T I +L +C+  G + EGK     ++R G G  P  ++    +++  +
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF-HVMRHGYGLTPRMEHY-ICMVDLLS 589

Query: 345 ECGKMSECEKVIHAIGER-NILSWNMLI 371
             G + E  + I ++  R ++  W  L+
Sbjct: 590 RGGFLDEAYEFIQSMPLRADVRVWVALL 617


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/650 (34%), Positives = 360/650 (55%), Gaps = 11/650 (1%)

Query: 100 SVLRACS-SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD--DARKVFDKM 156
           S+LR C+ S   L   + VH RI+  G  +D V+  S++  Y  F C D   AR VF+  
Sbjct: 8   SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVY--FTCKDHCSARHVFENF 65

Query: 157 TSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRP 214
             R DV  W+S+++ Y  N+   + L++F  ++   +  PD  T  ++ +A G L     
Sbjct: 66  DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R IH  V++     D  + +S + MY+K     ++ + F ++ +R   SW  +ISC+ +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           SG  +KALE F +M     EPN ++L   + +C+ L WL  GK +H + ++KG   + +Y
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD-EY 244

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  AL++ Y +C  +    +V   +  +++++WN +I  Y  KG SK  +E+L +M   G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAY 453
             P   ++ S L AC    +L  G  IHG+VI+ +   D +V  SLID+Y KCG  NLA 
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F + Q+     WN MI  +   GN  +A+ ++ QM    ++ D VTF + + ACS + 
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LEKGK +H  +    +  D  + +AL DMY+KCG+ + A R+F+S+ +++VVSW+ MI 
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            YG HGQ  +A   F +M   G+KP+ VT + +L AC H+G ++EG  +F+ MR  +G+E
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA-NGSIWGALLNGCRIHKRIDVMKTIEK 691
           P ++HY+CM+D+L R+G +  A+++I   P  + N  +   L + C +H    +   I +
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            L     +D   Y +L N+YA   +WD   +VR  M+  GL+K PG S I
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 165/570 (28%), Positives = 292/570 (51%), Gaps = 9/570 (1%)

Query: 1   MPLFRSCTN----LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           + L R CTN    LR++  +H  +L  GL  D      LI  Y       S+R VF+ F 
Sbjct: 7   LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66

Query: 57  -EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSG 114
              D ++W  L+  Y  N+ F +++ ++ +++     + + F +P+V++A  +LG    G
Sbjct: 67  IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             +H  ++K G+  D V+ +S++  Y +F   +++ +VFD+M  RDV SW+++I+ ++ +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            +  + L++F  M   G EP+ V++     AC  L  L   + IH   +++  ++D  + 
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ + MY KC  L  A   F K+ ++   +W +MI  Y   G  +  +E   +M+     
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+  TL ++L +C+    L  GK +H  +IR  +  +  Y+  +LI+ Y +CG+ +  E 
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADI-YVNCSLIDLYFKCGEANLAET 365

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V     +    SWN++IS Y   G   +A+E+  QM + G+ PD  +  S L AC  + +
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L+ G QIH  + +   + DE + S+L+DMYSKCG +  A+ +F  I +K VV W  MI  
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRK 532
           +  +G   EA+  F +M    L+ D VT L  + AC + G +++G K+       YG+  
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            I   + + D+  + G L  A  +     E
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 228/752 (30%), Positives = 384/752 (51%), Gaps = 24/752 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L R+  + R L+   R+HA ++  GL  +      L+  Y +  SL     VF   +  D
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +   + +I ++H+M +E        + +VL+AC+ LGDL  G  +H 
Sbjct: 93  EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I++ G     V+   +L  YG  GC+  A  +F+KM  RD+VSW++ IA+   + D+  
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGI 211

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M  EGV P  +T++     C    ++R A++IH  V    ++    +  +   
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALAS 268

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            Y++ G L  A+  F +  +R   SW AM+  Y + G   +A   F +ML     P+ +T
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+     C+ L   R G+ +H   + KG+  +   LG AL++ Y  CG   E   +   I
Sbjct: 329 LVNASTGCSSL---RFGRMIHGCALEKGLDRDI-VLGNALLDMYTRCGSPEEARHLFKRI 384

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN----VGSL 415
              N +SWN +I+  ++KG  K A+EL  +MQ  G+ P   +  + L A  +      ++
Sbjct: 385 -PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443

Query: 416 QLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFER---IQQKSVVMWNSMI 471
             G ++H  ++      E  + ++++ MY+ CG  + A   F+R     +  VV WN++I
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
               Q+G+   A+  F +M L+ +  +++T +  + AC+    L +G+ VH  L   G+ 
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGME 563

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            ++++ TAL  MY +CG L++A+ +F+ ++ ER+VV ++AMI  Y  +G   +A  LF +
Sbjct: 564 SNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWR 623

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSG 649
           M   G +P+E +F+++L ACSH G  +EG   F +MR  +G+ P   HYAC VD+L R+G
Sbjct: 624 MQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAG 683

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            +  A ++I  M       +W  LL  CR ++ +D  +     +      D   Y +LSN
Sbjct: 684 WLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSN 743

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           I A  G WDE  +VR+ ME  GL+K  G S I
Sbjct: 744 ILAGAGKWDEAAEVRTEMESRGLRKEAGKSWI 775



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 196/378 (51%), Gaps = 13/378 (3%)

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ +L +      L +G+ +H +I+  G+  E   LG  L+  Y +C  + + E+V   +
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCESLGDVEEVFSRL 88

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+  SW  +I+ Y   G +K A+ +  +MQ  G+  D+ +  + L AC  +G L  G 
Sbjct: 89  EVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGR 148

Query: 420 QIHGHVIKIDCKDEFVQSSLI-DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH  +++   K + V ++L+  +Y  CG    A LLFE+++ + +V WN+ I    Q+G
Sbjct: 149 SIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSG 207

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +   A+ LF +M L  +    +T + A+  C+ I Q +    +H  +   G+ + + + T
Sbjct: 208 DLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQA---IHFIVRESGLEQTLVVST 264

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL   YA+ G L  A+ VFD  +ER+VVSW+AM+  Y  HG +++AA LF +ML  GI P
Sbjct: 265 ALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISP 324

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           ++VT +N    CS   S+  G+         G++ D+     ++D+ +R G  E A  + 
Sbjct: 325 SKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 659 HSMPFPANGSIWGALLNG 676
             +  P N   W  ++ G
Sbjct: 382 KRI--PCNAVSWNTMIAG 397


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/655 (33%), Positives = 348/655 (53%), Gaps = 15/655 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +LR   S  +L  G+  H RI+  G   D  +  ++L  Y + G L  AR+VFD    RD
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 161 VVSWSSIIASYFDNAD-----VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           +V+W++I+ +Y  + D       EGL +F  +         +T+  + + C     L  A
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             +HG+ ++  ++ D  +  + + +YSKCG +  A   F  + +R    W  M+  Y + 
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSC--AGLGWLREGKSVHCQIIRKGMGPEYD 333
           G  ++A + F +       P+  ++  +L  C  AG   L  GK VH   ++ G+  +  
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  +L+  Y++ G      +V + +   +++SWN +IS  A+  + +E++ L + +   
Sbjct: 323 -VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE 381

Query: 394 GLMPDSFSVAS-----SLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCG 447
           GL PD F++AS     +  ACG +  L  G QIH H IK     D  V S ++DMY KCG
Sbjct: 382 GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A ++F  I     V W SMI G   NGN  +A+ ++H+M  + +  DE TF T I+
Sbjct: 442 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIK 501

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           A S +  LE+G+ +H  +I      D ++ T+L DMYAKCG+++ A R+F  M+ RN+  
Sbjct: 502 ASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL 561

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+AM+     HG   +A +LFK M   GI+P+ V+F+ IL ACSH+G   E   Y ++M 
Sbjct: 562 WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMP 621

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             +G+EP+++HY+C+VD L R+G ++ A K+I +MPF A+ SI  ALL  CRI   ++  
Sbjct: 622 NDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETG 681

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K +   L      D+  Y LLSNIYA    WD+    R +M+   +KK PG+S I
Sbjct: 682 KRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWI 736



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 207/755 (27%), Positives = 350/755 (46%), Gaps = 68/755 (9%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW---- 72
           HA ++V+G   D   S  L+  Y++ GSL S+R VFDT  E D   W  ++  Y      
Sbjct: 100 HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 159

Query: 73  -NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            +   +E + L+  +     + +      VL+ C + G L + E VHG  IK G + D  
Sbjct: 160 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 219

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  +++  Y + G + DAR +FD M  RDVV W+ ++  Y       E  ++F    R G
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 279

Query: 192 VEPDFVTMLSLAEAC--GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           + PD  ++  +   C       L   + +HG  ++  +  D  + NS + MYSK G    
Sbjct: 280 LRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF 339

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN-----LITLITVL 304
           A   F  ++     SW +MIS   +S   ++++  F+ +L    +P+      ITL T  
Sbjct: 340 AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAA 399

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C  L  L +GK +H   I+ G   +  ++   +++ Y +CG M     V + I   + 
Sbjct: 400 KACGCLVLLDQGKQIHAHAIKAGFDSDL-HVNSGILDMYIKCGDMVNAGIVFNYISAPDD 458

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           ++W  +IS     G   +AL +  +M+   +MPD ++ A+ + A   V +L+ G Q+H +
Sbjct: 459 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 518

Query: 425 VIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           VIK+DC  D FV +SL+DMY+KCG    AY LF+++  +++ +WN+M+ G  Q+GN+ EA
Sbjct: 519 VIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEA 578

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIG-QLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           +NLF  M  + +E D V+F+  + ACS+ G   E  +++H     YG+  +I   + L D
Sbjct: 579 VNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD 638

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
              + G +Q A +V ++M              +     +N A                  
Sbjct: 639 ALGRAGLVQEADKVIETMP-------------FKASASINRA------------------ 667

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLS---RSGDIEGAFKMI 658
              +L AC   G VE GK    A R+F +EP D   Y  + ++ +   R  D+  A KM+
Sbjct: 668 ---LLGACRIQGDVETGKRV--AARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMM 722

Query: 659 HSMPFPAN-GSIWGALLNGC-------RIHKRIDVMKTIEKELSVTGTNDNGYYT----L 706
                  + G  W  + N         R H + D++    +E+  T   ++GY      +
Sbjct: 723 KRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKT-IREDGYVPDTEFV 781

Query: 707 LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L ++  EE     +     +    GL   P  +TI
Sbjct: 782 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTI 816



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 221/422 (52%), Gaps = 11/422 (2%)

Query: 2   PLFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           P+ + C N   L     +H + +  GL +D   S  L+  Y++ G +R +RL+FD  +E 
Sbjct: 188 PVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER 247

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC--SSLGDLGSGEK 116
           D  +W +++K Y+     +E+  L+ +  R       F    +L  C  +   DL  G++
Sbjct: 248 DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQ 307

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VHG  +K G D D  +  S++  Y + GC   AR+VF+ M   D++SW+S+I+S   ++ 
Sbjct: 308 VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSL 367

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSL-----AEACGELCSLRPARSIHGHVLRRKIKIDG 231
             E + +F  ++ EG++PD  T+ S+     A+ACG L  L   + IH H ++     D 
Sbjct: 368 EEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL 427

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + +  + MY KCGD+++A   F  I      +WT+MIS    +G   +AL  + +M + 
Sbjct: 428 HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 487

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           +  P+  T  T++ + + +  L +G+ +H  +I+     +  ++G +L++ YA+CG + +
Sbjct: 488 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD-PFVGTSLVDMYAKCGNIED 546

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             ++   +  RNI  WN ++   A+ G ++EA+ L   M++ G+ PD  S    LSAC +
Sbjct: 547 AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 606

Query: 412 VG 413
            G
Sbjct: 607 AG 608



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 176/351 (50%), Gaps = 7/351 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   + +GL  D   +  L+  Y++MG    +R VF+  K  D   W  +I     ++
Sbjct: 307 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 366

Query: 75  FFEESILLYHKMIRE-----QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
             EES+ L+  ++ E       T+++    +  +AC  L  L  G+++H   IK GFD D
Sbjct: 367 LEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 426

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             + + IL  Y + G + +A  VF+ +++ D V+W+S+I+   DN +  + L+++H M +
Sbjct: 427 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 486

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             V PD  T  +L +A   + +L   R +H +V++     D  +G S + MY+KCG++  
Sbjct: 487 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIED 546

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A R F K+  R    W AM+    + G  ++A+  F  M     EP+ ++ I +L +C+ 
Sbjct: 547 AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 606

Query: 310 LGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            G   E  + +H      G+ PE ++    L++     G + E +KVI  +
Sbjct: 607 AGLTSEAYEYLHSMPNDYGIEPEIEHYS-CLVDALGRAGLVQEADKVIETM 656


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/625 (34%), Positives = 347/625 (55%), Gaps = 26/625 (4%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W   ++    +N F E+I  Y  MI    +  ++ +P VL+A + L DL  G+++H  ++
Sbjct: 45  WIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVV 104

Query: 123 KCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           K G++   V I  S++  YG+   LDD  KVFD++  RD+VSW+S+I+++    +    L
Sbjct: 105 KYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELAL 164

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCS---LRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + F  M+ E +EP   T++S   AC  L     LR  + IHG+  R          N+ +
Sbjct: 165 EAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFTNNALM 223

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+  G L  A+  F   E R   SW  MIS ++++  F +AL S   M+    +P+ +
Sbjct: 224 TMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGV 283

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL +VL +C+ L  L  GK +H   +R G   E  ++G AL++ Y  CG++    +V   
Sbjct: 284 TLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDG 343

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQL 417
           I ER    WN +I+ YA+    ++AL L ++M    GL P++ ++AS + A     S   
Sbjct: 344 ILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFS 403

Query: 418 GLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
              IHG+VIK D  +D +VQ++L+DMYS+     ++  +F+ ++ + +V WN+MI G+  
Sbjct: 404 KESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVI 463

Query: 477 NGNSLEAINLFHQM-YLN------------CLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           +G   +A+ + H+M + N            C + + +T +T +  C+++  L KGK +H 
Sbjct: 464 SGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHA 523

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             +   +  ++ + +AL DMYAKCG L  ++RVFD M  +NV++W+ ++  YGMHG   +
Sbjct: 524 YAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEE 583

Query: 584 AASLFKQMLDSG-----IKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQH 637
           A  LFK M+  G     +KP EVT + IL ACSHSG V+EG   F+ M+   G+EP   H
Sbjct: 584 ALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDH 643

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMP 662
           YAC+ DLL R+G +E A+  I++MP
Sbjct: 644 YACVADLLGRAGKVEQAYDFINTMP 668



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 293/588 (49%), Gaps = 33/588 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPA-STRLIESYAEMGSLRSSRLVFDTFKEP 58
           + ++ T L+ L    ++HAH++  G      A +  L+  Y +   L     VFD   E 
Sbjct: 83  VLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINER 142

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD---LGSGE 115
           D   W  LI  +     +E ++  +  M+ E    S+F   S + ACS+L     L  G+
Sbjct: 143 DLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGK 202

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++HG   + G         +++  Y   G LDDA+ +F     R+++SW+++I+S+  N 
Sbjct: 203 QIHGYCFRNG-HWSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNE 261

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LG 234
              E L     MV EGV+PD VT+ S+  AC  L  L   + IH + LR    I+   +G
Sbjct: 262 RFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVG 321

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ + MY  CG + S  R F  I +R T  W AMI+ Y ++   +KAL  F++M+ V   
Sbjct: 322 SALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGL 381

Query: 295 -PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSEC 352
            PN  T+ +++ + A        +S+H  +I++ +  E D Y+  AL++ Y+   KM   
Sbjct: 382 CPNTTTMASIVPASARCESFFSKESIHGYVIKRDL--ERDRYVQNALMDMYSRMRKMEIS 439

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-------------LMPDS 399
           + +  ++  R+I+SWN +I+ Y   G   +AL +L +MQ                  P+S
Sbjct: 440 KTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNS 499

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFER 458
            ++ + L  C ++ +L  G +IH + ++     E  V S+L+DMY+KCG  NL+  +F++
Sbjct: 500 ITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQ 559

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-----LNCLEMDEVTFLTAIQACSNIG 513
           +  K+V+ WN ++  +  +GN  EA+ LF  M      +  ++  EVT +  + ACS+ G
Sbjct: 560 MPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSG 619

Query: 514 QLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            +++G  + H++   +G+         + D+  + G ++ A    ++M
Sbjct: 620 MVDEGLKLFHRMKDDHGIEPGPDHYACVADLLGRAGKVEQAYDFINTM 667



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 215/435 (49%), Gaps = 21/435 (4%)

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
           + R   SW   +    RS  F++A+ ++V M+     P+      VL +  GL  L  GK
Sbjct: 38  QSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGK 97

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H  +++ G       +  +L+ FY +C ++ +  KV   I ER+++SWN LIS + R 
Sbjct: 98  QIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRA 157

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS---LQLGLQIHGHVIKIDCKDEF 434
              + ALE    M    L P SF++ S + AC N+     L+LG QIHG+  +      F
Sbjct: 158 QEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTF 217

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
             ++L+ MY+  G  + A  LF+  + ++++ WN+MI  F QN   +EA+     M L  
Sbjct: 218 TNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEG 277

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
           ++ D VT  + + ACS +  L  GK +H + L S  + ++ ++ +AL DMY  CG + + 
Sbjct: 278 VKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSG 337

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSH 612
           +RVFD + ER    W+AMI  Y  +     A  LF +M+  +G+ PN  T  +I+ A + 
Sbjct: 338 RRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASAR 397

Query: 613 SGSVEEGKFYFNAMRIFG------VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA- 665
             S      +F+   I G      +E D      ++D+ SR   +E +  +  SM     
Sbjct: 398 CES------FFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDI 451

Query: 666 ---NGSIWGALLNGC 677
              N  I G +++GC
Sbjct: 452 VSWNTMITGYVISGC 466



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P    C +      +H +++   L  D      L++ Y+ M  +  S+ +FD+ +  D 
Sbjct: 392 VPASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDI 451

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATI-------------SNFIYPSVLRACSS 107
             W  +I  Y+ +  + +++L+ H+M      I             ++    +VL  C+S
Sbjct: 452 VSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCAS 511

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           L  L  G+++H   ++     +  + ++++  Y + GCL+ +R+VFD+M  ++V++W+ I
Sbjct: 512 LAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVI 571

Query: 168 IASYFDNADVSEGLKMFHSMVREG-----VEPDFVTMLSLAEAC 206
           + +Y  + +  E L++F  MV +G     V+P  VTM+++  AC
Sbjct: 572 VMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAAC 615


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/728 (31%), Positives = 369/728 (50%), Gaps = 17/728 (2%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           G   D  A   +I +Y  +G L+ +RL+F     PD   W V+I  +        +I  +
Sbjct: 256 GHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYF 315

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M +     +     SVL A   + +L  G  VH   IK G   +  + +S++  Y + 
Sbjct: 316 LNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
             ++ A KVF+ +  R+ V W+++I  Y  N +  + +++F  M   G   D  T  SL 
Sbjct: 376 EKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
             C     L      H  ++++K+  +  +GN+ + MY+KCG L  A + F  +  R   
Sbjct: 436 STCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNV 495

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW  +I  Y +     +A + F++M       +   L + L +C  +  L +GK VHC  
Sbjct: 496 SWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLS 555

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           ++ G+     + G +LI+ Y++CG + +  KV  ++ E +++S N LI+ Y++  + +EA
Sbjct: 556 VKCGL-DRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEA 613

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLID 441
           + L  +M T G+ P   + A+ + AC    SL LG Q HG +IK     + E++  SL+ 
Sbjct: 614 VVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLG 673

Query: 442 MYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           +Y        A  LF  +   KS+V+W  M+ G  QNG   EA+  + +M  +    D+ 
Sbjct: 674 LYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQA 733

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TF+T ++ CS +  L +G+ +H  +       D      L DMYAKCGD++++ +VFD M
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEM 793

Query: 561 SER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
             R NVVSW+++I+ Y  +G   DA  +F  M  S I P+E+TF+ +L ACSH+G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853

Query: 620 KFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
           +  F  M   +G+E  + H ACMVDLL R G ++ A   I +     +  +W +LL  CR
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913

Query: 679 IH-----KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           IH       I   + IE E       ++  Y LLSNIYA +G W+E   +R  M   G+K
Sbjct: 914 IHGDDMRGEIAAERLIELE-----PQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVK 968

Query: 734 KVPGYSTI 741
           KVPGYS I
Sbjct: 969 KVPGYSWI 976



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 184/685 (26%), Positives = 323/685 (47%), Gaps = 55/685 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MP  R    LR    +H+  L+ G+  +      +++ YA+   +  +   F++  E D 
Sbjct: 68  MP-HRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDV 125

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATI-SNFIYPS------VLRACSSLGDLGS 113
             W  ++  Y        SI    K++R   ++  N I+P+      VL   +   ++  
Sbjct: 126 TAWNSMLSMY-------SSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEF 178

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G ++H  +IK G +++     +++  Y +   L DA++VFD +   + V W+ + + Y  
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVK 238

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                E + +F  M  EG  PD +  +++                               
Sbjct: 239 AGLPEEAVIVFERMRGEGHRPDHLAFVTV------------------------------- 267

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
               I  Y   G L  A   F ++      +W  MIS + + G    A+E F+ M +   
Sbjct: 268 ----INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSV 323

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           +    TL +VL +   +  L  G  VH + I+ G+     Y+G +L+  Y++C KM    
Sbjct: 324 KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGSSLVSMYSKCEKMEAAA 382

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV  A+ ERN + WN +I  YA  G S + +EL + M++ G   D F+  S LS C    
Sbjct: 383 KVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSH 442

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L++G Q H  +IK    K+ FV ++L+DMY+KCG    A  +FE +  +  V WN++I 
Sbjct: 443 DLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIG 502

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+ Q+ N  EA +LF +M    +  D     + ++AC+N+  L +GK VH   +  G+ +
Sbjct: 503 GYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDR 562

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            ++  ++L DMY+KCG ++ A++VF SM E +VVS +A+I  Y     L +A  LF++ML
Sbjct: 563 VLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYS-QNNLEEAVVLFQEML 621

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA-CMVDLLSRSGDI 651
             G+ P+E+TF  I+ AC    S+  G  +   +  +G   + ++    ++ L   S  +
Sbjct: 622 TKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRM 681

Query: 652 EGAFKMIHSMPFPANGSIWGALLNG 676
             A  +   +  P +  +W  +++G
Sbjct: 682 AEACALFSELSSPKSIVLWTGMMSG 706



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/625 (27%), Positives = 315/625 (50%), Gaps = 13/625 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +  GL  +    + L+  Y++   + ++  VF+  +E +  +W  +I+ Y  N  
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGE 408

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             + + L+  M      I +F + S+L  C+   DL  G + H  IIK    K+  +  +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNA 468

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L+DAR++F+ M  RD VSW++II  Y  + + SE   +F  M   G+  D
Sbjct: 469 LVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSD 528

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERT 253
              + S  +AC  +  L   + +  H L  K  +D  L  G+S I MYSKCG +  A + 
Sbjct: 529 GACLASTLKACTNVHGLYQGKQV--HCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKV 586

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  + +    S  A+I+ Y+++   ++A+  F +ML     P+ IT  T++ +C     L
Sbjct: 587 FSSMPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESL 645

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE-CEKVIHAIGERNILSWNMLIS 372
             G   H QII+ G   E +YLG +L+  Y    +M+E C         ++I+ W  ++S
Sbjct: 646 TLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMS 705

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            +++ G  +EAL+   +M+  G +PD  +  + L  C  + SL+ G  IH  +  +    
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQM 490
           DE   ++LIDMY+KCG    +  +F+ ++++S VV WNS+I G+ +NG + +A+ +F  M
Sbjct: 766 DELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGD 549
             + +  DE+TFL  + ACS+ G++  G+ +   +I  YG+   +     + D+  + G 
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885

Query: 550 LQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNIL 607
           LQ A    ++ + + +   WS+++    +HG         +++++  ++P N   ++ + 
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIE--LEPQNSSAYVLLS 943

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVE 632
              +  G  EE      AMR  GV+
Sbjct: 944 NIYASQGRWEEANALRKAMRDRGVK 968



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 6/176 (3%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + R C+   +LR+   +H+ +       D   S  LI+ YA+ G ++SS  VFD  + 
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRR 795

Query: 58  PDSFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             + + W  LI  Y  N + E+++ ++  M +         +  VL ACS  G +  G K
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRK 855

Query: 117 VHGRII-KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
           +   +I + G +        ++   G +G L +A    +    + D   WSS++ +
Sbjct: 856 IFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/740 (31%), Positives = 385/740 (52%), Gaps = 100/740 (13%)

Query: 91  ATISNFIYPS----VLRACSSLGDLGSGEKVHGRIIKCG--------------------F 126
           A I   +YPS    +L+ C S   +    ++H +II  G                    F
Sbjct: 36  ACIGVDVYPSHFASLLKECKSANTV---HQIHQQIIASGLLSLPTPLLSVSLPALPSEPF 92

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
                + T ++ +Y   G  D A  V +++T    V W+ +I  +     +   + +   
Sbjct: 93  ISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCR 152

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+R G  PD  T+  + +ACGEL S R   + HG +     + +  + N+ + MYS+CG 
Sbjct: 153 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 212

Query: 247 LLSAERTFVKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEP-----NL 297
           L  A   F +I +R      SW +++S + +S     AL+ F KM L V E+P     ++
Sbjct: 213 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 272

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           I+++ +L +C  L  + + K VH   IR G  P+  ++G ALI+ YA+CG M    KV +
Sbjct: 273 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV-FVGNALIDAYAKCGLMENAVKVFN 331

Query: 358 AIGERNILSWNML-----------------------------------ISEYARKGMSKE 382
            +  ++++SWN +                                   I+ Y+++G S E
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC------------ 430
           AL L  QM   G +P+  ++ S LSAC ++G+   G +IH + +K +C            
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLK-NCLLTLDNDFGGED 450

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           +D  V ++LIDMYSKC     A  +F+ I  ++++VV W  MI G  Q G+S +A+ LF 
Sbjct: 451 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 510

Query: 489 QMYLNC--LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA------L 540
           +M      +  +  T    + AC+++  +  GK +H    +Y +R   Y  +A      L
Sbjct: 511 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIH----AYVLRHHRYESSAYFVANCL 566

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMY+KCGD+ TA+ VFDSMS+++ +SW++M+  YGMHG+ ++A  +F +M  +G  P++
Sbjct: 567 IDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 626

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           +TF+ +L+ACSH G V++G  YF++M   +G+ P  +HYAC +DLL+RSG ++ A++ + 
Sbjct: 627 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVK 686

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MP      +W ALL+ CR+H  +++ +    +L      ++G YTL+SNIYA  G W +
Sbjct: 687 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 746

Query: 720 FGKVRSIMEVTGLKKVPGYS 739
             ++R +M+ +G+KK PG S
Sbjct: 747 VARIRHLMKKSGIKKRPGCS 766



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 177/673 (26%), Positives = 325/673 (48%), Gaps = 82/673 (12%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTG---------------LHYDPPASTR-----LIESYAEM 42
           L + C +   + ++H  ++ +G               L  +P  S R     ++ SY   
Sbjct: 50  LLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLAC 109

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G+   + LV +      +  W +LI+ ++     + +I +  +M+R      +F  P VL
Sbjct: 110 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 169

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR--- 159
           +AC  L     G   HG I   GF+ +  I  +++  Y   G L++A  +FD++T R   
Sbjct: 170 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 229

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSM---VRE---GVEPDFVTMLSLAEACGELCSLR 213
           DV+SW+SI++++  +++    L +F  M   V E       D ++++++  ACG L ++ 
Sbjct: 230 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 289

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + +HG+ +R     D  +GN+ I  Y+KCG + +A + F  +E +   SW AM++ Y+
Sbjct: 290 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 349

Query: 274 RSGWFQKALESFVKM------LEV-----------------------------KEEPNLI 298
           +SG F+ A E F  M      L+V                                PN +
Sbjct: 350 QSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCV 409

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGM--------GPEYDYLG-PALIEFYAECGKM 349
           T+I+VL +CA LG   +G  +H   ++  +        G + D +   ALI+ Y++C   
Sbjct: 410 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 469

Query: 350 SECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASS 405
                +   I   ERN+++W ++I  +A+ G S +AL+L V+M  + +G+ P++++++  
Sbjct: 470 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 529

Query: 406 LSACGNVGSLQLGLQIHGHVI---KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           L AC ++ ++++G QIH +V+   + +    FV + LIDMYSKCG  + A  +F+ + QK
Sbjct: 530 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 589

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWV 521
           S + W SM+ G+  +G   EA+++F +M       D++TFL  + ACS+ G +++G  + 
Sbjct: 590 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 649

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQ 580
                 YG+           D+ A+ G L  A R    M  E   V W A++    +H  
Sbjct: 650 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSN 709

Query: 581 LNDAASLFKQMLD 593
           +  A     ++++
Sbjct: 710 VELAEHALNKLVE 722



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 202/448 (45%), Gaps = 57/448 (12%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S   + +   +H + +  G   D      LI++YA+ G + ++  VF+  +  D 
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQ---------ATISNF--------------- 96
             W  ++  Y  +  FE +  L+  M +E          A I+ +               
Sbjct: 339 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 398

Query: 97  -IYP----------SVLRACSSLGDLGSGEKVHGRIIK-C---------GFDKDDVIQTS 135
            I+           SVL AC+SLG    G ++H   +K C         G D+D ++  +
Sbjct: 399 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 458

Query: 136 ILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE--G 191
           ++  Y +      AR +FD   +  R+VV+W+ +I  +    D ++ LK+F  M+ E  G
Sbjct: 459 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 518

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDLLS 249
           V P+  T+  +  AC  L ++R  + IH +VLR          + N  I MYSKCGD+ +
Sbjct: 519 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 578

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F  + ++   SWT+M++ Y   G   +AL+ F KM +    P+ IT + VL +C+ 
Sbjct: 579 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 638

Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSW 367
            G + +G S    +    G+ P  ++   A I+  A  G++ +  + +  +  E   + W
Sbjct: 639 CGMVDQGLSYFDSMSADYGLTPRAEHYACA-IDLLARSGRLDKAWRTVKDMPMEPTAVVW 697

Query: 368 NMLISE---YARKGMSKEALELLVQMQT 392
             L+S    ++   +++ AL  LV+M  
Sbjct: 698 VALLSACRVHSNVELAEHALNKLVEMNA 725


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/687 (32%), Positives = 372/687 (54%), Gaps = 13/687 (1%)

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRIIKC 124
           +IK    + FFE++I +Y   I     +  F  +P +++A   L D+  G+++HG ++K 
Sbjct: 9   MIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKF 68

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF +D  ++ S+L  Y + G   +A  +F++M  RD VSW+++I+ +  + D  + L MF
Sbjct: 69  GFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMF 128

Query: 185 HSMVRE--GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
             MV+E  G   + V  L+   +C  +  L     IHG ++++ +  D  L ++ I MY 
Sbjct: 129 RRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYM 188

Query: 243 KCGDLLSAERTFVKIEK-----RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           KCGD+ +AE  F +I       R    W  MI  Y  +     ALE FV+MLE+   P+ 
Sbjct: 189 KCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDS 248

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVI 356
            T++ VL  C+ L  L  GK +H  I+  G+G + D  +G AL+E Y +CG      ++ 
Sbjct: 249 STVVVVLVLCSQLLDLAVGKQIHGLIL--GLGLDDDVRVGTALMEMYFKCGDPETSLQIF 306

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
                 N++ W  ++   A+ G   EALE   +       PD   + ++L AC  +    
Sbjct: 307 KRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKP 366

Query: 417 LGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G+ IHG  IK+    D FV  +L+D Y KCG    A  +F  +  + +V WN++I GF 
Sbjct: 367 RGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFA 426

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           QN  + EA+  F  M    ++ + VT    +  C+++  +   K VH  L+ +    +  
Sbjct: 427 QNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNAL 486

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           ++ +L   YAKCGD+ +++ VF+ +  RN V+W++++  +GMHG+ ++  + F++M ++ 
Sbjct: 487 VNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEAN 546

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNA-MRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           IKP+  TF ++L +CSHSG V+ G  YFN+ M  + +EP ++ Y CMVDLL R+G++  A
Sbjct: 547 IKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQA 606

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           + +I SMP   +  IWG+LL  C+ H    + + +   +     +  GY  LL+N+Y + 
Sbjct: 607 YDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDS 666

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           GN +E  +VR+ ++  GLKK PG S I
Sbjct: 667 GNLNEVFRVRTDIKQMGLKKQPGCSWI 693



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 302/567 (53%), Gaps = 12/567 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    ++ K  ++H HLL  G   D      L+  Y + G+  ++  +F+  +E DS  W
Sbjct: 49  FGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSW 108

Query: 64  AVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIY-PSVLRACSSLGDLGSGEKVHGRI 121
             +I  +  +  + +S++++ +M++E   +  N +   + L +C+S+  L  G ++HG +
Sbjct: 109 NTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFL 168

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK-----MTSRDVVSWSSIIASYFDNAD 176
           +K G D D+ + ++++  Y + G + +A  VF++     +  R++  W+ +I  Y  N  
Sbjct: 169 VKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNEC 228

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           +S  L++F  M+  G+ PD  T++ +   C +L  L   + IHG +L   +  D  +G +
Sbjct: 229 LSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTA 288

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSW-TAMISCYNRSGWFQKALESFVKMLEVKEEP 295
            + MY KCGD  ++ + F + +      W + M++C  ++G+  +ALE F + +     P
Sbjct: 289 LMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNC-AQNGYPNEALEFFSEFMLDCGFP 347

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + + L+  L +C+ L     G ++H   I+ G   +  ++G AL++FY +CG M   ++V
Sbjct: 348 DPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDV-FVGGALVDFYGKCGDMEYAQQV 406

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            + +  R+++SWN LIS +A+   + EAL+    MQ+  + P++ ++A  LS C ++  +
Sbjct: 407 FYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVM 466

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            L  ++H ++++   + +  V +SLI  Y+KCG  + +  +FE++  ++ V WNS++ GF
Sbjct: 467 ILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGF 526

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKD 533
             +G + E    F +M    ++ D  TF + + +CS+ G+++ G K+ +  +  Y +   
Sbjct: 527 GMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPR 586

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSM 560
           +   T + D+  + G+L  A  +  SM
Sbjct: 587 VEQYTCMVDLLGRAGNLNQAYDLIMSM 613



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 236/487 (48%), Gaps = 14/487 (2%)

Query: 6   SCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF- 61
           SC +++ LT    +H  L+  G+  D    + LIE Y + G ++++  VF+  ++ +   
Sbjct: 151 SCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVG 210

Query: 62  ----MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
               +W V+I  Y+ N     ++ L+ +M+    +  +     VL  CS L DL  G+++
Sbjct: 211 RNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQI 270

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG I+  G D D  + T+++  Y + G  + + ++F +  + ++V W S++ +   N   
Sbjct: 271 HGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYP 330

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIKIDGPLGNS 236
           +E L+ F   + +   PD V +L+   AC  L SL+P   +IHG  ++     D  +G +
Sbjct: 331 NEALEFFSEFMLDCGFPDPVILLAALRACSFL-SLKPRGMAIHGFAIKMGFDSDVFVGGA 389

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            +  Y KCGD+  A++ F  +  R   SW A+IS + ++    +AL++F  M   + +PN
Sbjct: 390 LVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPN 449

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T+  +L  C  L  +   K VHC ++R         +  +LI  YA+CG +     V 
Sbjct: 450 TVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNA-LVNNSLISAYAKCGDIHSSRTVF 508

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  RN ++WN ++  +   G + E      +M+   + PD  +  S LS+C + G + 
Sbjct: 509 EKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVD 568

Query: 417 LGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMICG 473
            G +    +++    +  V+  + ++D+  + G  N AY L+          +W S++  
Sbjct: 569 AGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLAS 628

Query: 474 FYQNGNS 480
              +GN+
Sbjct: 629 CKNHGNT 635


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 242/747 (32%), Positives = 394/747 (52%), Gaps = 17/747 (2%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  +   R    +HAH+L  G   +      L+  YA+ G + ++R VFD     D
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTD 262

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  N+  E  + L+  M+  +   +     SV  A   L ++G  +++HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K GF  D     S++  Y   G + DA K+F +M ++D +SW+++I+ Y  N    +
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+++  M    V PD VT+ S   AC  L  L     +H     +       + N+ + 
Sbjct: 383 ALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMIS--CYNRSGWFQKALESFVKML-EVKEEPN 296
           MY+K   +  A   F  + ++   SW++MI+  C+N   +   AL  F  ML  VK  PN
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF--DALYYFRYMLGHVK--PN 498

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T I  L +CA  G LR GK +H  ++R G+G E  Y+  AL++ Y +CG+ S      
Sbjct: 499 SVTFIAALSACAATGALRSGKEIHAYVLRCGIGSE-GYVPNALLDLYVKCGQTSYAWAQF 557

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               E++++SWN+++S +   G+   AL L  QM    L        S+L+AC  +G L 
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLD 615

Query: 417 LGLQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           +G+++H     K   +   V ++L++MY+K    + A  +F+ + +K VV W+SMI GF 
Sbjct: 616 VGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC 675

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
            N  S +A+  F  M L  ++ + VTF+ A+ AC+  G L  GK +H  ++  G+  + Y
Sbjct: 676 FNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGY 734

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           +  AL D+Y KCG    A   F   SE++VVSW+ M+  +  HG  + A SLF QM++ G
Sbjct: 735 VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMG 794

Query: 596 IKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
             P+EVTF+ ++ ACS +G V +G + +      F + P+L+HYACMVDLLSR G +  A
Sbjct: 795 EHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEA 853

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           + +I+ MP   + ++WGALLNGCRIH+ +++ +   K +     ND  Y+ LL ++Y + 
Sbjct: 854 YNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDA 913

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G W +  +VR  M   GL++  G S +
Sbjct: 914 GKWAQVARVRKTMREKGLEQDNGCSWV 940



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 200/652 (30%), Positives = 344/652 (52%), Gaps = 7/652 (1%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF    E D F W V++  Y    F EE++ LY++M+        + +P VLR C  + D
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
              G +VH  +++ GF  +  +  +++  Y + G +  ARKVFD M   D +SW+++IA 
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAG 272

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +F+N +   GL++F +M+   V+P+ +T+ S+  A G L  +  A+ +HG  ++R   ID
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
               NS I MY+  G +  A + F ++E +   SWTAMIS Y ++G+  KALE +  M  
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               P+ +T+ + L +CA LG L  G  +H     KG    Y  +  AL+E YA+   + 
Sbjct: 393 HNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGF-IRYVVVANALLEMYAKSKHID 451

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +V   + E++++SW+ +I+ +     S +AL     M    + P+S +  ++LSAC 
Sbjct: 452 KAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACA 510

Query: 411 NVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
             G+L+ G +IH +V++     E +V ++L+D+Y KCG  + A+  F    +K VV WN 
Sbjct: 511 ATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNI 570

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           M+ GF  +G    A++LF+QM    L    +   +A+ AC+ +G+L+ G  +H    + G
Sbjct: 571 MLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKG 628

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
             + + +  AL +MYAK   +  A  VF  M+E++VVSWS+MI  +  + +  DA   F+
Sbjct: 629 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFR 688

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
            ML   +KPN VTF+  L AC+ +G++  GK     +   G+  +      ++DL  + G
Sbjct: 689 YMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 747

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
               A+    S+    +   W  +L+G   H   D+  ++  ++   G + +
Sbjct: 748 QTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPD 798



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 238/471 (50%), Gaps = 4/471 (0%)

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           LGN+ + M  + G++  A R F K+ +R   SW  M+  Y + G+ ++AL+ + +ML   
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             P++ T   VL +C G+   R G+ VH  ++R G G E D L  AL+  YA+CG +   
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLN-ALVTMYAKCGDIVAA 251

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            KV   +   + +SWN +I+ +      +  LEL + M    + P+  ++ S   A G +
Sbjct: 252 RKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311

Query: 413 GSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             +    ++HG  +K     D    +SLI MY+  G    A  +F R++ K  + W +MI
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G+ +NG   +A+ ++  M L+ +  D+VT  +A+ AC+ +G+L+ G  +H    + G  
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           + + +  AL +MYAK   +  A  VF  M+E++VVSWS+MI  +  + +  DA   F+ M
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM 491

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           L   +KPN VTF+  L AC+ +G++  GK     +   G+  +      ++DL  + G  
Sbjct: 492 LGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 550

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
             A+    S+    +   W  +L+G   H   D+  ++  ++  T     G
Sbjct: 551 SYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMG 600


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/646 (32%), Positives = 355/646 (54%), Gaps = 6/646 (0%)

Query: 99  PSVLRACSSLGD-LGSGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFDKM 156
           P+  R+   + + L  G+ VH   +       + I  +++ + + +FG L  AR++FD M
Sbjct: 41  PNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGM 100

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R  VSW+ +I  Y  +    E  +++  M R G+EPD+VT+++L    GEL +     
Sbjct: 101 VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIV 160

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            IH HV++   + +  + NS +  Y K   L  A + F  +  + T ++ ++++ Y+  G
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEG 220

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             ++A+E F+++     +P+  T   +L +  GL   + G+ VH  +++        ++G
Sbjct: 221 LNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNV-FVG 279

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL+++Y++  ++ E  K+   + E + +S+N++I+ YA  G  KE+ +L  ++Q     
Sbjct: 280 NALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
              F  A+ LS   +  +L++G QIH   I +    E  V+++L+DMY+KC     A  +
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKI 399

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ I  KS V W +MI  + Q G   E IN+F  M    +  D+ TF + ++AC+N+  +
Sbjct: 400 FDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASI 459

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             G+ +H  LI  G   ++Y  +AL D YAKCG +  A + F  M ERN VSW+A+I  Y
Sbjct: 460 SLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAY 519

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             +G ++   + F+QM+ SG KP+ V+F+++L ACSH G VEE  ++FN+M +I+ V P 
Sbjct: 520 AQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPK 579

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL- 693
            +HY  MVD+L R+G  + A K++  MPF  +  +W ++LN CRIHK  ++ K     L 
Sbjct: 580 REHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLF 639

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++    D   Y  +SNIYA  G WD   KV+  M   G++KVP YS
Sbjct: 640 NMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYS 685



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 283/573 (49%), Gaps = 17/573 (2%)

Query: 16  LHAHLLVTGLHYDPPAST----RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +HAH +   +   P  +T     +I  + + G L  +R +FD   E  +  W +LI  Y+
Sbjct: 60  VHAHQVFDQM---PAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE---KVHGRIIKCGFDK 128
            +N  +E+  LY  M R         Y +++   S  G+L +     ++H  +IK G++ 
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           + ++  S++  Y +  CL  A ++F  M ++D V+++S++  Y +     E +++F  + 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G++P   T  +L  A   L   +  + +HG VL+     +  +GN+ +  YSK   + 
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
              + F ++ +    S+  +I+ Y  +G F+++ + F K+   + +       T+L    
Sbjct: 294 EVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               LR G+ +HCQ I  G   E   +  AL++ YA+C    E +K+   I  ++ + W 
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFE-SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWT 412

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +IS Y +KG  +E + +   M+  G+  D  + AS L AC N+ S+ LG Q+H  +I+ 
Sbjct: 413 AMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRS 472

Query: 429 D-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               + +  S+L+D Y+KCG    A   F  + +++ V WN++I  + QNGN    +N F
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAK 546
            QM  +  + D V+FL+ + ACS+ G +E+  W  + +   Y V       T++ D+  +
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592

Query: 547 CGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
            G    A+++   M  E + + WS++++   +H
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIH 625



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 226/474 (47%), Gaps = 14/474 (2%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++H H++  G  Y+      L+++Y +   L  +  +F      D+  +  L+  Y  
Sbjct: 159 IVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSN 218

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
               EE+I L+ ++       S+F + ++L A   L D   G++VHG ++K  F  +  +
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             ++L  Y +   +D+  K+F +M   D +S++ +I SY  N    E   +F  +     
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF 338

Query: 193 EP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +     F T+LS+A +     +LR  R IH   +      +  + N+ + MY+KC     
Sbjct: 339 DRRQFPFATLLSIATSS---LNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKE 395

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A++ F  I  + T  WTAMIS Y + G  ++ +  F  M       +  T  ++L +CA 
Sbjct: 396 AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACAN 455

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L  +  G+ +H  +IR G      Y G AL++ YA+CG M++  K    + ERN +SWN 
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNV-YSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNA 514

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL---QIHGHVI 426
           LIS YA+ G     L    QM   G  PDS S  S LSAC + G ++  L        + 
Sbjct: 515 LISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIY 574

Query: 427 KIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMI--CGFYQN 477
           ++  K E   +S++D+  + G F     L+ E   + S +MW+S++  C  ++N
Sbjct: 575 EVTPKREHY-TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKN 627



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 142/574 (24%), Positives = 274/574 (47%), Gaps = 51/574 (8%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
           L L  +     SL     I  H+++     +    N  +  + + GDL+ A + F ++  
Sbjct: 12  LVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPA 71

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLE------------------VKE-------- 293
           + T S   MIS + + G   KA E F  M+E                   KE        
Sbjct: 72  KNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADM 131

Query: 294 -----EPNLITLITVLGSCAGLGWLREGKSV----HCQIIRKGMGPEYDYLG-PALIEFY 343
                EP+ +TL+T+L   +G G L E K+V    H  +I+  +G EY+ +   +L++ Y
Sbjct: 132 RRGGIEPDYVTLVTLL---SGFGEL-ETKNVIVQIHTHVIK--LGYEYNLMVCNSLVDAY 185

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            +   +    ++   +  ++ +++N L++ Y+ +G+++EA+EL +++   G+ P  F+ A
Sbjct: 186 CKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFA 245

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           + LSA   +   + G Q+HG V+K +   + FV ++L+D YSK    +    LF  + + 
Sbjct: 246 ALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPEL 305

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
             + +N +I  +  NG   E+ +LF ++     +  +  F T +   ++   L  G+ +H
Sbjct: 306 DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH 365

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
            + I+ G   +  ++ AL DMYAKC   + AQ++FD+++ ++ V W+AMI  Y   G+  
Sbjct: 366 CQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHE 425

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
           +  ++F  M  +G+  ++ TF +IL AC++  S+  G+   + +   G   ++   + ++
Sbjct: 426 EGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALL 485

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN- 701
           D  ++ G +  A K    MP   N   W AL++    +  +D      +++  +G   + 
Sbjct: 486 DTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDS 544

Query: 702 -GYYTLLSNI----YAEEGNWDEFGKVRSIMEVT 730
             + ++LS      + EE  W  F  +  I EVT
Sbjct: 545 VSFLSVLSACSHCGFVEEALW-HFNSMTQIYEVT 577



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 193/384 (50%), Gaps = 10/384 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +L T   ++      L++ Y++   +     +F    E D   + V+I  Y WN 
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNG 321

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F+ES  L+ K+   +     F + ++L   +S  +L  G ++H + I  G + +  ++ 
Sbjct: 322 QFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN 381

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y +     +A+K+FD +  +  V W+++I++Y       EG+ +F  M R GV  
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPA 441

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T  S+  AC  L S+   R +H  ++R     +   G++ +  Y+KCG +  A ++F
Sbjct: 442 DQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSF 501

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R + SW A+IS Y ++G     L SF +M++   +P+ ++ ++VL +C+  G++ 
Sbjct: 502 GEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVE 561

Query: 315 EGK---SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNML 370
           E     +   QI    + P+ ++   ++++     G+  E EK++  +  E + + W+ +
Sbjct: 562 EALWHFNSMTQIYE--VTPKREHY-TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618

Query: 371 ISE---YARKGMSKEALELLVQMQ 391
           ++    +    ++K+A + L  M+
Sbjct: 619 LNSCRIHKNHELAKKAADRLFNME 642



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 33/302 (10%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  NLR   ++H   +  G +++      L++ YA+    + ++ +FD      +  W  
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y+     EE I ++  M R         + S+LRAC++L  +  G ++H  +I+ G
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  +    +++L TY + GC+ DA K F +M  R+ VSW+++I++Y  N +V   L  F 
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQ 533

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M++ G +PD V+ LS+  AC   C        H               NS   +Y    
Sbjct: 534 QMIQSGYKPDSVSFLSVLSACSH-CGFVEEALWH--------------FNSMTQIYE--- 575

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
             ++ +R            +T+M+    R+G F +A +    M E+  EP+ I   +VL 
Sbjct: 576 --VTPKR----------EHYTSMVDVLCRNGRFDEAEK---LMTEMPFEPSEIMWSSVLN 620

Query: 306 SC 307
           SC
Sbjct: 621 SC 622


>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
 gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
          Length = 734

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/673 (31%), Positives = 361/673 (53%), Gaps = 18/673 (2%)

Query: 3   LFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L R C    +L K   +H  L  +G+  D      LI+ Y   G +  +R +FD   + +
Sbjct: 9   LLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRN 68

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W +++  Y  N  + E+++L ++M  E    ++  +  +L ACS+LGD+ +G K+H 
Sbjct: 69  VYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHA 128

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R++  G+D D V+ T+IL  Y +   L DA+K+FD +  +DVVSW++II ++        
Sbjct: 129 RMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRV 188

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M  +GV+P+  T +++  AC  + +L     ++   +      D  +G++ + 
Sbjct: 189 ALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVT 248

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYS+ G+L+ A+  F  + ++ T SW A++  Y + G   +AL  + +M     EP+  T
Sbjct: 249 MYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFT 308

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHA 358
            + +LG+C+ LG L EG+ +H +     MG + D L G A++  YA+CG +         
Sbjct: 309 HVCLLGACSSLGALEEGERIHAR-----MGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTK 363

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +   N++ WN LI+ Y +    +EAL+L   M   GL  D ++ +S L AC     L  G
Sbjct: 364 MSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEG 423

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +H  ++    +    +Q+ L++M++KCG   LA  +F  +  ++ V WNSM+  F Q+
Sbjct: 424 RAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQH 483

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG--QLEKGKWVHHKLISYGVRKDIY 535
           G+   A  LF +M L   E  E TF + +  CS+     L++GK +H ++ + GV  D  
Sbjct: 484 GDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPT 543

Query: 536 IDTALTDMY-----AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           + T L  MY     AKCG L  A+ VFD +  +NV+SW+AMI  Y  H + + A  LF++
Sbjct: 544 VATCLLTMYLLNALAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFRE 603

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M   GI+ +E+TF +IL ACSH G V  G+ YF +M     + P  +HY  ++D+L+R+G
Sbjct: 604 MELDGIQADEITFTSILHACSHRGLVRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAG 663

Query: 650 DIEGAFKMIHSMP 662
            +  A ++    P
Sbjct: 664 RVGEAEEVAKVFP 676



 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 188/607 (30%), Positives = 320/607 (52%), Gaps = 11/607 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +LR C     L  G ++H ++ + G DKD  +  +++  YG  GC+  AR++FDK+ 
Sbjct: 6   YGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLI 65

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+V SW+ ++++Y  N    E L + + M  EG+ P+ VT L +  AC  L  +   R 
Sbjct: 66  DRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRK 125

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  ++      D  +  + + MYSKC  L  A++ F  + ++   SWTA+I+ +++ G 
Sbjct: 126 IHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGR 185

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            + ALE F +M     +PN  T + +L +C  +  L +G  ++ + I  G G +  ++G 
Sbjct: 186 PRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADV-FVGS 244

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
             +  Y+  G + E +     + E++  SWN ++  Y + G   +AL L  +M   G  P
Sbjct: 245 TAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEP 304

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           D+F+    L AC ++G+L+ G +IH  +   D  D    S+++ MY+KCG    A   F 
Sbjct: 305 DTFTHVCLLGACSSLGALEEGERIHARM--GDKPDGLAGSAIVAMYAKCGGIEHAMTAFT 362

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           ++   +VV+WN++I G+ Q  +  EA++L+H M L  LE D  TF + + ACS    L +
Sbjct: 363 KMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSE 422

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ VH +++S G+   + +   L +M+AKCG L  A  +F  M+ RN VSW++M+  +  
Sbjct: 423 GRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQ 482

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG--SVEEGKFYFNAMRIFGVEPDL 635
           HG    A  LFK+ML  G +P+E TF +IL  CSHS   S+++GK     +   GV+ D 
Sbjct: 483 HGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDP 542

Query: 636 QHYACMVDL-----LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
               C++ +     L++ G ++ A  +   +    N   W A++ G   H R D    + 
Sbjct: 543 TVATCLLTMYLLNALAKCGALDDARAVFDGIR-GKNVLSWTAMIVGYAQHARGDGALELF 601

Query: 691 KELSVTG 697
           +E+ + G
Sbjct: 602 REMELDG 608



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 171/309 (55%), Gaps = 6/309 (1%)

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           DS S    L  CG   SL  G++IH  + +  +D KD ++ ++LI MY  CG    A  +
Sbjct: 2   DSASYGRLLRECGLSKSLSKGMEIHKKLAESGVD-KDTYLGNNLIQMYGNCGCVGKAREI 60

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+++  ++V  W  M+  + QNG+ +EA+ L +QM L  +  + VTFL  + ACSN+G +
Sbjct: 61  FDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDV 120

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E G+ +H +++  G   D  + TA+  MY+KC  L  A+++FDS+  ++VVSW+A+I  +
Sbjct: 121 ETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAF 180

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPD 634
              G+   A  LF +M   G+KPNE TF+NIL AC++  ++E+G K Y  A+   G   D
Sbjct: 181 SQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISC-GYGAD 239

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           +   +  V + SR G++  A      +   + GS W A++     H  I    ++ KE+ 
Sbjct: 240 VFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGS-WNAIVRAYIQHGHISQALSLYKEMD 298

Query: 695 VTGTNDNGY 703
           V G   + +
Sbjct: 299 VHGAEPDTF 307



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 84/165 (50%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD  ++   ++ C     L KG  +H KL   GV KD Y+   L  MY  CG +  A+ +
Sbjct: 1   MDSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREI 60

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           FD + +RNV SW+ M+  Y  +G   +A  L  QM   GI+PN VTF+ IL ACS+ G V
Sbjct: 61  FDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDV 120

Query: 617 EEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           E G+     M   G + D      ++ + S+   +  A K+  S+
Sbjct: 121 ETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSL 165


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 246/796 (30%), Positives = 389/796 (48%), Gaps = 63/796 (7%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F+ C     L    + HAH++++G          L++ Y       S+ +VFD     D
Sbjct: 54  VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113

Query: 60  SFMWAVLIKCY-------MWNNFFE------------------------ESILLYHKMIR 88
              W  +I  Y         N+FF                         +SI ++  M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173

Query: 89  EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
           E        +  +L+ CS L D   G ++HG +++ G D D V  +++L  Y +     +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLSLAEAC 206
           + +VF  +  ++ VSWS+IIA    N  +S  LK F  M  V  GV        S+  +C
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA--SVLRSC 291

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
             L  LR    +H H L+     DG +  + + MY+KC ++  A+  F   E     S+ 
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           AMI+ Y++     KAL  F +++      + I+L  V  +CA +  L EG  ++   I+ 
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS 411

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
            +  +   +  A I+ Y +C  ++E  +V   +  R+ +SWN +I+ + + G   E L L
Sbjct: 412 SLSLDV-CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
            V M    + PD F+  S L AC   GSL  G++IH  ++K     +  V  SLIDMYSK
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529

Query: 446 CGFKNLAYLLFERIQQKS--------------------VVMWNSMICGFYQNGNSLEAIN 485
           CG    A  +  R  Q++                     V WNS+I G+     S +A  
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF +M    +  D+ T+ T +  C+N+     GK +H ++I   ++ D+YI + L DMY+
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCGDL  ++ +F+    R+ V+W+AMI  Y  HG+  +A  LF++M+   IKPN VTF++
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 709

Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           IL AC+H G +++G  YF  M R +G++P L HY+ MVD+L +SG ++ A ++I  MPF 
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 769

Query: 665 ANGSIWGALLNGCRIHK-RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
           A+  IW  LL  C IH+  ++V +     L      D+  YTLLSN+YA+ G W++   +
Sbjct: 770 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829

Query: 724 RSIMEVTGLKKVPGYS 739
           R  M    LKK PG S
Sbjct: 830 RRNMRGFKLKKEPGCS 845



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 171/652 (26%), Positives = 301/652 (46%), Gaps = 55/652 (8%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +   + +  ++S   +  V + C+  G L  G++ H  +I  GF     +   +L  Y  
Sbjct: 36  FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95

Query: 143 FGCLDDARKVFDKMT-------------------------------SRDVVSWSSIIASY 171
                 A  VFDKM                                 RDVVSW+S+++ Y
Sbjct: 96  SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
             N +  + +++F  M REG+E D  T   + + C  L        IHG V+R     D 
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
              ++ + MY+K    + + R F  I ++ + SW+A+I+   ++     AL+ F +M +V
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
               +     +VL SCA L  LR G  +H   ++     +   +  A ++ YA+C  M +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD-GIVRTATLDMYAKCDNMQD 334

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            + +       N  S+N +I+ Y+++    +AL L  ++ + GL  D  S++    AC  
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           V  L  GLQI+G  IK     D  V ++ IDMY KC     A+ +F+ ++++  V WN++
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I    QNG   E + LF  M  + +E DE TF + ++AC+  G L  G  +H  ++  G+
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM 513

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NV-------------------VSWSA 570
             +  +  +L DMY+KCG ++ A+++     +R NV                   VSW++
Sbjct: 514 ASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNS 573

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           +I  Y M  Q  DA  LF +M++ GI P++ T+  +L  C++  S   GK     +    
Sbjct: 574 IISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE 633

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           ++ D+   + +VD+ S+ GD+  + +++       +   W A++ G   H +
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGK 684


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/752 (29%), Positives = 365/752 (48%), Gaps = 78/752 (10%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMW--AVLIKCYM------------------ 71
           + RL+E Y+  G  R + L F     P+ + +  A+   C                    
Sbjct: 46  ANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNA 105

Query: 72  --WNNFFE----------ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             WN              E++ +Y +M  E    ++F   SVL AC  L  LG G + HG
Sbjct: 106 VSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHG 165

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K G D +  ++ ++L  Y + G + DA ++F  M   + VS+++++        + +
Sbjct: 166 VAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDD 225

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCS--------LRPARSIHGHVLRRKIKIDG 231
            L++F  M R GV  D V++ S+  AC + C+         R  ++IH  V+R+    D 
Sbjct: 226 ALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQ 285

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            +GNS I MY+KC ++  A + F  +      SW  +I+ + + G   KA+E    M E 
Sbjct: 286 HVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEA 345

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             EPN +T   +L SC       + + VH                               
Sbjct: 346 GFEPNEVTYSNLLASCI------KARDVH------------------------------S 369

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              +   I   ++ +WN L+S Y ++   ++ +EL  +MQ   + PD  ++A  LS+C  
Sbjct: 370 ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSK 429

Query: 412 VGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           +G L  G Q+H   ++ +   D FV S L+DMYSKCG   +A  +F ++ ++ VV WNS+
Sbjct: 430 LGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSI 489

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I G   +  + EA + F QM  N +   E ++ + I +CS +  +  G+ +H +++  G 
Sbjct: 490 ISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGY 549

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            +++Y+ +AL DMYAKCG++  A+  FD+M  +N+V+W+ MI  Y  +G  + A  LF+ 
Sbjct: 550 DQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEY 609

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSG 649
           ML +  KP+ VTF+ +L  CSHSG V++   +FN+M   +G+ P  +HY C++D L R+G
Sbjct: 610 MLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAG 669

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
                  +IH MP   +  IW  LL  C +H   ++ K   + L      +   Y LLSN
Sbjct: 670 RFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSN 729

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           IYA  G   +   VR++M   G+ K  GYS I
Sbjct: 730 IYASLGRHGDASAVRALMSNRGVVKGRGYSWI 761



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 270/591 (45%), Gaps = 52/591 (8%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C  L  L    R H   +  GL  +      L+  Y + GS+  +  +F     P+
Sbjct: 147 VLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPN 206

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC--------SSLGDL 111
              +  ++         ++++ L+ +M R    +      SVL AC        S     
Sbjct: 207 EVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAF 266

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             G+ +H  +++ GF  D  +  S++  Y +   +D+A KVF+ + S  +VSW+ +I  +
Sbjct: 267 RLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGF 326

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
                 ++ +++   M   G EP+ VT  +L  +C +      AR +H            
Sbjct: 327 GQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIK------ARDVH------------ 368

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
                            SA   F KI +   T+W  ++S Y +    Q  +E F +M   
Sbjct: 369 -----------------SARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQ 411

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +P+  TL  +L SC+ LG L  G+ VH   +R  +  +  ++   L++ Y++CG++  
Sbjct: 412 NVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDM-FVASGLVDMYSKCGQIGI 470

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              + + + ER+++ WN +IS      ++KEA +   QM+  G+MP   S AS +++C  
Sbjct: 471 ARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSR 530

Query: 412 VGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           + S+  G QIH  V+K D  D+  +V S+LIDMY+KCG  + A L F+ +  K++V WN 
Sbjct: 531 LSSIPHGRQIHAQVMK-DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNE 589

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISY 528
           MI G+ QNG   +A+ LF  M     + D VTF+  +  CS+ G ++K     + +  SY
Sbjct: 590 MIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSY 649

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
           G+       T L D   + G     + +   M  + + + W  ++    +H
Sbjct: 650 GIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVH 700



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 162/366 (44%), Gaps = 38/366 (10%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC+ L  L    ++H+  +   LH D   ++ L++ Y++ G +  +R +F+   E D
Sbjct: 423 ILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERD 482

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     ++  +E+   + +M       +   Y S++ +CS L  +  G ++H 
Sbjct: 483 VVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHA 542

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +++K G+D++  + ++++  Y + G +DDAR  FD M  +++V+W+ +I  Y  N    +
Sbjct: 543 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDK 602

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +++F  M+    +PD VT +++   C            H  ++ + +     + NS+  
Sbjct: 603 AVELFEYMLTTEQKPDAVTFIAVLTGCS-----------HSGLVDKAMAFFNSMENSY-- 649

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                G +  AE             +T +I    R+G F + +E+ +  +  K++P  I 
Sbjct: 650 -----GIIPLAEH------------YTCLIDALGRAGRFVE-VEALIHKMPCKDDP--II 689

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L +C        GK     + R  + P+       L   YA  G+  +   V   +
Sbjct: 690 WEVLLAACVVHHNAELGKCAAEHLFR--IDPKNPSPYVLLSNIYASLGRHGDASAVRALM 747

Query: 360 GERNIL 365
             R ++
Sbjct: 748 SNRGVV 753


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/699 (32%), Positives = 370/699 (52%), Gaps = 65/699 (9%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           I P  +  C ++  +   + +H +++  G    + + + ++ TY   GCL  A  +  + 
Sbjct: 30  ITPPFIHKCKTISQV---KLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRF 85

Query: 157 TSRD--VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
              D  V  W+S+I SY DN   ++ L +F  M      PD  T   + +ACGE+ S+R 
Sbjct: 86  PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
             S H   L      +  +GN+ + MYS+C  L  A + F ++      SW ++I  Y +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205

Query: 275 SGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
            G  + ALE F +M  E    P+ ITL+ VL  CA LG    GK +HC  +   M  +  
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNM 264

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML----------------------- 370
           ++G  L++ YA+CG M E   V   +  ++++SWN +                       
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324

Query: 371 ------------ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
                       IS YA++G+  EAL +  QM + G+ P+  ++ S LS C +VG+L  G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384

Query: 419 LQIHGHVIK--IDCK------DEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWN 468
            +IH + IK  ID +      +  V + LIDMY+KC   + A  +F+ +  +++ VV W 
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444

Query: 469 SMICGFYQNGNSLEAINLFHQMYL-NC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
            MI G+ Q+G++ +A+ L  +M+  +C    +  T   A+ AC+++  L  GK +H    
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH---- 500

Query: 527 SYGVRKD-----IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           +Y +R       +++   L DMYAKCG +  A+ VFD+M  +N V+W++++  YGMHG  
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYAC 640
            +A  +F +M   G K + VT + +L+ACSHSG +++G  YFN M+ +FGV P  +HYAC
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC 620

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           +VDLL R+G +  A ++I  MP      +W A L+ CRIH ++++ +   ++++   +N 
Sbjct: 621 LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNH 680

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +G YTLLSN+YA  G W +  ++RS+M   G+KK PG S
Sbjct: 681 DGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCS 719



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 180/633 (28%), Positives = 311/633 (49%), Gaps = 55/633 (8%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS- 60
           P    C  + ++  +H  LL  G+      ++ LI +Y  +G L  +  +   F   D+ 
Sbjct: 33  PFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAG 91

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W  LI+ Y  N    + + L+  M     T  N+ +P V +AC  +  +  GE  H 
Sbjct: 92  VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +  GF  +  +  +++  Y     L DARKVFD+M+  DVVSW+SII SY        
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211

Query: 180 GLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L+MF  M  E G  PD +T++++   C  L +    + +H   +  ++  +  +GN  +
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK------ 292
            MY+KCG +  A   F  +  +   SW AM++ Y++ G F+ A+  F KM E K      
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331

Query: 293 -----------------------------EEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
                                         +PN +TLI+VL  CA +G L  GK +HC  
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391

Query: 324 I-------RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEY 374
           I       + G G E + +   LI+ YA+C K+     +  ++   ER++++W ++I  Y
Sbjct: 392 IKYPIDLRKNGHGDE-NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450

Query: 375 ARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDC 430
           ++ G + +ALELL +M  +     P++F+++ +L AC ++ +L++G QIH + ++   + 
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
              FV + LIDMY+KCG  + A L+F+ +  K+ V W S++ G+  +G   EA+ +F +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGD 549
                ++D VT L  + ACS+ G +++G    +++ + +GV         L D+  + G 
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630

Query: 550 LQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
           L  A R+ + M  E   V W A + C  +HG++
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/648 (33%), Positives = 352/648 (54%), Gaps = 6/648 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y +++ AC+++  L  G+++H  I+K     D V+Q  IL  YG+ G L DARK FD M 
Sbjct: 83  YVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ 142

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R VVSW+ +I+ Y  N   ++ + M+  M+R G  PD +T  S+ +AC     +     
Sbjct: 143 LRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQ 202

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HGHV++          N+ I MY+K G +  A   F  I  +   SW +MI+ + + G+
Sbjct: 203 LHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGY 262

Query: 278 FQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             +AL  F  M  +   +PN     +V  +C  L     G+ +     + G+G    + G
Sbjct: 263 EIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNV-FAG 321

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +L + YA+ G +   ++  + I   +++SWN +I+  A   ++ EA+    QM   GLM
Sbjct: 322 CSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVN-EAIYFFCQMIHMGLM 380

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLL 455
           PD  +  + L ACG+  +L  G+QIH ++IK+   K   V +SL+ MY+KC   + A+ +
Sbjct: 381 PDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNV 440

Query: 456 FERIQQK-SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           F+ I +  ++V WN+++    Q+    EA  LF  M  +  + D +T  T +  C+ +  
Sbjct: 441 FKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVS 500

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           LE G  VH   +  G+  D+ +   L DMYAKCG L+ A+ VFDS    ++VSWS++I  
Sbjct: 501 LEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVG 560

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEP 633
           Y   G   +A +LF+ M + G++PNEVT++ +L ACSH G VEEG   +N M I  G+ P
Sbjct: 561 YAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPP 620

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             +H +CMVDLL+R+G +  A   I    F  + ++W  LL  C+ H  +D+ +   + +
Sbjct: 621 TREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENI 680

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                +++    LLSNI+A  GNW E  ++R++M+  G++KVPG S I
Sbjct: 681 LKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWI 728



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 181/639 (28%), Positives = 316/639 (49%), Gaps = 13/639 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +CTN+R L    R+H H+L +    D      ++  Y + GSL+ +R  FDT +   
Sbjct: 86  LILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRS 145

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W ++I  Y  N    ++I++Y +M+R         + S+++AC   GD+  G ++HG
Sbjct: 146 VVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHG 205

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +IK G+D   + Q +++  Y +FG +  A  VF  ++++D++SW+S+I  +       E
Sbjct: 206 HVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIE 265

Query: 180 GLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L +F  M R+GV +P+     S+  AC  L      R I G   +  +  +   G S  
Sbjct: 266 ALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLC 325

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G L SA+R F +IE     SW A+I+    S    +A+  F +M+ +   P+ I
Sbjct: 326 DMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD-VNEAIYFFCQMIHMGLMPDDI 384

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T + +L +C     L +G  +H  II+ G+  +   +  +L+  Y +C  + +   V   
Sbjct: 385 TFLNLLCACGSPMTLNQGMQIHSYIIKMGL-DKVAAVCNSLLTMYTKCSNLHDAFNVFKD 443

Query: 359 IGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           I E  N++SWN ++S  ++     EA  L   M      PD+ ++ + L  C  + SL++
Sbjct: 444 ISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEV 503

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+H   +K     D  V + LIDMY+KCG    A  +F+  Q   +V W+S+I G+ Q
Sbjct: 504 GNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQ 563

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIY 535
            G   EA+NLF  M    ++ +EVT+L  + ACS+IG +E+G  +++ + I  G+     
Sbjct: 564 FGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTRE 623

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
             + + D+ A+ G L  A+        + ++  W  ++     HG ++ A    + +L  
Sbjct: 624 HVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILK- 682

Query: 595 GIKPNEVTFMNILWACSHS-GSVEEGKFYFNAMRIFGVE 632
            + P+    + +L     S G+ +E     N M+  GV+
Sbjct: 683 -LDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQ 720



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 253/511 (49%), Gaps = 25/511 (4%)

Query: 179 EGLKMFHSMVREG---VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           E L  F+  ++     +EP   T ++L  AC  + SL+  + IH H+L+   + D  L N
Sbjct: 62  EALDTFNFHLKNSSIQLEPS--TYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQN 119

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MY KCG L  A + F  ++ R   SWT MIS Y+++G    A+  +++ML     P
Sbjct: 120 HILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFP 179

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSEC 352
           + +T  +++ +C   G +  G  +H  +I+ G    YD+      ALI  Y + G+++  
Sbjct: 180 DQLTFGSIIKACCIAGDIDLGGQLHGHVIKSG----YDHHLIAQNALISMYTKFGQIAHA 235

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL-MPDSFSVASSLSACGN 411
             V   I  ++++SW  +I+ + + G   EAL L   M   G+  P+ F   S  SAC +
Sbjct: 236 SDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRS 295

Query: 412 VGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           +   + G QI G   K    ++ F   SL DMY+K GF   A   F +I+   +V WN++
Sbjct: 296 LLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAI 355

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I     N +  EAI  F QM    L  D++TFL  + AC +   L +G  +H  +I  G+
Sbjct: 356 IAAL-ANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGL 414

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFK 589
            K   +  +L  MY KC +L  A  VF  +SE  N+VSW+A++     H Q  +A  LFK
Sbjct: 415 DKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFK 474

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP----DLQHYACMVDLL 645
            ML S  KP+ +T   IL  C+   S+E G    N +  F V+     D+     ++D+ 
Sbjct: 475 LMLFSENKPDNITITTILGTCAELVSLEVG----NQVHCFSVKSGLVVDVSVSNRLIDMY 530

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           ++ G ++ A  +  S   P   S W +L+ G
Sbjct: 531 AKCGLLKHARYVFDSTQNPDIVS-WSSLIVG 560


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/737 (31%), Positives = 375/737 (50%), Gaps = 29/737 (3%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D  +  ++I  Y++   +  +   F+     D   W  ++  Y+ N    +SI ++  M 
Sbjct: 71  DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           RE        +  +L+ CS L D   G ++HG +++ G D D V  +++L  Y +     
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 190

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLSLAEA 205
           ++ +VF  +  ++ VSWS+IIA    N  +S  LK F  M  V  GV        S+  +
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA--SVLRS 248

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C  L  LR    +H H L+     DG +  + + MY+KC ++  A+  F   E     S+
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            AMI+ Y++     KAL  F +++      + I+L  V  +CA +  L EG  ++   I+
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
             +  +   +  A I+ Y +C  ++E  +V   +  R+ +SWN +I+ + + G   E L 
Sbjct: 369 SSLSLDV-CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 427

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYS 444
           L V M    + PD F+  S L AC   GSL  G++IH  ++K     +  V  SLIDMYS
Sbjct: 428 LFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 445 KCGFKNLAYLLFERIQQKS--------------------VVMWNSMICGFYQNGNSLEAI 484
           KCG    A  +  R  Q++                     V WNS+I G+     S +A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF +M    +  D+ T+ T +  C+N+     GK +H ++I   ++ D+YI + L DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 606

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           +KCGDL  ++ +F+    R+ V+W+AMI  Y  HG+  +A  LF++M+   IKPN VTF+
Sbjct: 607 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 666

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           +IL AC+H G +++G  YF  M R +G++P L HY+ MVD+L +SG ++ A ++I  MPF
Sbjct: 667 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 726

Query: 664 PANGSIWGALLNGCRIHK-RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
            A+  IW  LL  C IH+  ++V +     L      D+  YTLLSN+YA+ G W++   
Sbjct: 727 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 786

Query: 723 VRSIMEVTGLKKVPGYS 739
           +R  M    LKK PG S
Sbjct: 787 LRRNMRGFKLKKEPGCS 803



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 174/587 (29%), Positives = 309/587 (52%), Gaps = 25/587 (4%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++  G   D  A++ L++ YA+      S  VF    E +S  W+ +I   + NN
Sbjct: 159 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 218

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
               ++  + +M +  A +S  IY SVLR+C++L +L  G ++H   +K  F  D +++T
Sbjct: 219 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 278

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  Y +   + DA+ +FD   + +  S++++I  Y       + L +FH ++  G+  
Sbjct: 279 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 338

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D +++  +  AC  +  L     I+G  ++  + +D  + N+ I MY KC  L  A R F
Sbjct: 339 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 398

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R   SW A+I+ + ++G   + L  FV ML  + EP+  T  ++L +C G G L 
Sbjct: 399 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLG 457

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NI--------- 364
            G  +H  I++ GM      +G +LI+ Y++CG + E EK+     +R N+         
Sbjct: 458 YGMEIHSSIVKSGMASN-SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 516

Query: 365 ----------LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                     +SWN +IS Y  K  S++A  L  +M   G+ PD F+ A+ L  C N+ S
Sbjct: 517 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 576

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
             LG QIH  VIK + + D ++ S+L+DMYSKCG  + + L+FE+  ++  V WN+MICG
Sbjct: 577 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 636

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRK 532
           +  +G   EAI LF +M L  ++ + VTF++ ++AC+++G ++KG ++ +     YG+  
Sbjct: 637 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 696

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
            +   + + D+  K G ++ A  +   M  E + V W  ++    +H
Sbjct: 697 QLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 743



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 292/630 (46%), Gaps = 55/630 (8%)

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT------- 157
           C+  G L  G++ H  +I  GF     +   +L  Y        A  VFDKM        
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 158 ------------------------SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
                                    RDVVSW+S+++ Y  N +  + +++F  M REG+E
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D  T   + + C  L        IHG V+R     D    ++ + MY+K    + + R 
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I ++ + SW+A+I+   ++     AL+ F +M +V    +     +VL SCA L  L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           R G  +H   ++     +   +  A ++ YA+C  M + + +       N  S+N +I+ 
Sbjct: 256 RLGGQLHAHALKSDFAAD-GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           Y+++    +AL L  ++ + GL  D  S++    AC  V  L  GLQI+G  IK     D
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 374

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V ++ IDMY KC     A+ +F+ ++++  V WN++I    QNG   E + LF  M  
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           + +E DE TF + ++AC+  G L  G  +H  ++  G+  +  +  +L DMY+KCG ++ 
Sbjct: 435 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 493

Query: 553 AQRVFDSMSER-NV-------------------VSWSAMIDCYGMHGQLNDAASLFKQML 592
           A+++     +R NV                   VSW+++I  Y M  Q  DA  LF +M+
Sbjct: 494 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 553

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
           + GI P++ T+  +L  C++  S   GK     +    ++ D+   + +VD+ S+ GD+ 
Sbjct: 554 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLH 613

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
            + +++       +   W A++ G   H +
Sbjct: 614 DS-RLMFEKSLRRDFVTWNAMICGYAHHGK 642



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 247/504 (49%), Gaps = 32/504 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC  L +L    +LHAH L +    D    T  ++ YA+  +++ ++++FD  +  +
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 304

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              +  +I  Y       +++LL+H+++             V RAC+ +  L  G +++G
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 364

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK     D  +  + +  YG+   L +A +VFD+M  RD VSW++IIA++  N    E
Sbjct: 365 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 424

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F SM+R  +EPD  T  S+ +AC    SL     IH  +++  +  +  +G S I 
Sbjct: 425 TLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLID 483

Query: 240 MYSKCGDLLSAERTFVKIEKRCT--------------------TSWTAMISCYNRSGWFQ 279
           MYSKCG +  AE+   +  +R                       SW ++IS Y      +
Sbjct: 484 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 543

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
            A   F +M+E+   P+  T  TVL +CA L     GK +H Q+I+K +  +  Y+   L
Sbjct: 544 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV-YICSTL 602

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           ++ Y++CG + +   +      R+ ++WN +I  YA  G  +EA++L  +M    + P+ 
Sbjct: 603 VDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 662

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQ--SSLIDMYSKCG-FKNLAYLL 455
            +  S L AC ++G +  GL+ + +++K D   D  +   S+++D+  K G  K    L+
Sbjct: 663 VTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 721

Query: 456 FERIQQKSVVMWNSM--ICGFYQN 477
            E   +   V+W ++  +C  ++N
Sbjct: 722 REMPFEADDVIWRTLLGVCTIHRN 745


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/740 (31%), Positives = 385/740 (52%), Gaps = 100/740 (13%)

Query: 91  ATISNFIYPS----VLRACSSLGDLGSGEKVHGRIIKCG--------------------F 126
           A I   +YPS    +L+ C S   +    ++H +II  G                    F
Sbjct: 29  ACIGVDVYPSHFASLLKECKSANTV---HQIHQQIIASGLLSLPTPLLSVSLPALPSEPF 85

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
                + T ++ +Y   G  D A  V +++T    V W+ +I  +     +   + +   
Sbjct: 86  ISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCR 145

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+R G  PD  T+  + +ACGEL S R   + HG +     + +  + N+ + MYS+CG 
Sbjct: 146 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 205

Query: 247 LLSAERTFVKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEP-----NL 297
           L  A   F +I +R      SW +++S + +S     AL+ F KM L V E+P     ++
Sbjct: 206 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 265

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           I+++ +L +C  L  + + K VH   IR G  P+  ++G ALI+ YA+CG M    KV +
Sbjct: 266 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV-FVGNALIDAYAKCGLMENAVKVFN 324

Query: 358 AIGERNILSWNML-----------------------------------ISEYARKGMSKE 382
            +  ++++SWN +                                   I+ Y+++G S E
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC------------ 430
           AL L  QM   G +P+  ++ S LSAC ++G+   G +IH + +K +C            
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLK-NCLLTLDNDFGGED 443

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           +D  V ++LIDMYSKC     A  +F+ I  ++++VV W  MI G  Q G+S +A+ LF 
Sbjct: 444 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 503

Query: 489 QMYLNC--LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA------L 540
           +M      +  +  T    + AC+++  +  GK +H    +Y +R   Y  +A      L
Sbjct: 504 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIH----AYVLRHHRYESSAYFVANCL 559

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMY+KCGD+ TA+ VFDSMS+++ +SW++M+  YGMHG+ ++A  +F +M  +G  P++
Sbjct: 560 IDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 619

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           +TF+ +L+ACSH G V++G  YF++M   +G+ P  +HYAC +DLL+RSG ++ A++ + 
Sbjct: 620 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVK 679

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MP      +W ALL+ CR+H  +++ +    +L      ++G YTL+SNIYA  G W +
Sbjct: 680 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 739

Query: 720 FGKVRSIMEVTGLKKVPGYS 739
             ++R +M+ +G+KK PG S
Sbjct: 740 VARIRHLMKKSGIKKRPGCS 759



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 177/673 (26%), Positives = 325/673 (48%), Gaps = 82/673 (12%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTG---------------LHYDPPASTR-----LIESYAEM 42
           L + C +   + ++H  ++ +G               L  +P  S R     ++ SY   
Sbjct: 43  LLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLAC 102

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G+   + LV +      +  W +LI+ ++     + +I +  +M+R      +F  P VL
Sbjct: 103 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 162

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR--- 159
           +AC  L     G   HG I   GF+ +  I  +++  Y   G L++A  +FD++T R   
Sbjct: 163 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 222

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSM---VRE---GVEPDFVTMLSLAEACGELCSLR 213
           DV+SW+SI++++  +++    L +F  M   V E       D ++++++  ACG L ++ 
Sbjct: 223 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 282

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + +HG+ +R     D  +GN+ I  Y+KCG + +A + F  +E +   SW AM++ Y+
Sbjct: 283 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 342

Query: 274 RSGWFQKALESFVKM------LEV-----------------------------KEEPNLI 298
           +SG F+ A E F  M      L+V                                PN +
Sbjct: 343 QSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCV 402

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGM--------GPEYDYLG-PALIEFYAECGKM 349
           T+I+VL +CA LG   +G  +H   ++  +        G + D +   ALI+ Y++C   
Sbjct: 403 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 462

Query: 350 SECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASS 405
                +   I   ERN+++W ++I  +A+ G S +AL+L V+M  + +G+ P++++++  
Sbjct: 463 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 522

Query: 406 LSACGNVGSLQLGLQIHGHVI---KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           L AC ++ ++++G QIH +V+   + +    FV + LIDMYSKCG  + A  +F+ + QK
Sbjct: 523 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 582

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWV 521
           S + W SM+ G+  +G   EA+++F +M       D++TFL  + ACS+ G +++G  + 
Sbjct: 583 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 642

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQ 580
                 YG+           D+ A+ G L  A R    M  E   V W A++    +H  
Sbjct: 643 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSN 702

Query: 581 LNDAASLFKQMLD 593
           +  A     ++++
Sbjct: 703 VELAEHALNKLVE 715



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 202/448 (45%), Gaps = 57/448 (12%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S   + +   +H + +  G   D      LI++YA+ G + ++  VF+  +  D 
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQ---------ATISNF--------------- 96
             W  ++  Y  +  FE +  L+  M +E          A I+ +               
Sbjct: 332 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 391

Query: 97  -IYP----------SVLRACSSLGDLGSGEKVHGRIIK-C---------GFDKDDVIQTS 135
            I+           SVL AC+SLG    G ++H   +K C         G D+D ++  +
Sbjct: 392 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 451

Query: 136 ILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE--G 191
           ++  Y +      AR +FD   +  R+VV+W+ +I  +    D ++ LK+F  M+ E  G
Sbjct: 452 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 511

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDLLS 249
           V P+  T+  +  AC  L ++R  + IH +VLR          + N  I MYSKCGD+ +
Sbjct: 512 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 571

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F  + ++   SWT+M++ Y   G   +AL+ F KM +    P+ IT + VL +C+ 
Sbjct: 572 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 631

Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSW 367
            G + +G S    +    G+ P  ++   A I+  A  G++ +  + +  +  E   + W
Sbjct: 632 CGMVDQGLSYFDSMSADYGLTPRAEHYACA-IDLLARSGRLDKAWRTVKDMPMEPTAVVW 690

Query: 368 NMLISE---YARKGMSKEALELLVQMQT 392
             L+S    ++   +++ AL  LV+M  
Sbjct: 691 VALLSACRVHSNVELAEHALNKLVEMNA 718


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/686 (33%), Positives = 367/686 (53%), Gaps = 59/686 (8%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSII 168
           L S E +H +++  G   D    T I+  Y  F     A  V  ++  +S  V  W+ +I
Sbjct: 42  LASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLI 98

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
                   + + L+++  M R G  PD  T   + +ACGE+ S R   S+H  V     +
Sbjct: 99  RRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFE 158

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT---TSWTAMISCYNRSGWFQKALESF 285
            +  +GN  + MY +CG   +A + F ++ +R      SW ++++ Y + G   +A++ F
Sbjct: 159 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 218

Query: 286 VKMLE-VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
            +M E +   P+ ++L+ VL +CA +G    GK VH   +R G+  +  ++G A+++ YA
Sbjct: 219 ERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV-FVGNAVVDMYA 277

Query: 345 ECGKMSECEKVIH-------------------------AIG----------ERNILSWNM 369
           +CG M E  KV                           A+G          E N+++W+ 
Sbjct: 278 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 337

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-- 427
           +I+ YA++G+  EAL++  QM+  G  P+  ++ S LS C   G+L  G + H H IK  
Sbjct: 338 VIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWI 397

Query: 428 --IDCKDE----FVQSSLIDMYSKCGFKNLAYLLFERIQQK--SVVMWNSMICGFYQNGN 479
             +D  D      V ++LIDMYSKC     A  +F+ I  K  SVV W  +I G  Q+G 
Sbjct: 398 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 457

Query: 480 SLEAINLFHQMYL--NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYI 536
           + EA+ LF QM    N +  +  T   A+ AC+ +G L  G+ +H  ++        +++
Sbjct: 458 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 517

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              L DMY+K GD+  A+ VFD+M +RN VSW++++  YGMHG+  +A  +F +M   G+
Sbjct: 518 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGL 577

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            P+ VTF+ +L+ACSHSG V++G  YFN M + FGV P  +HYACMVDLLSR+G ++ A 
Sbjct: 578 VPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAM 637

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           ++I  MP     ++W ALL+ CR++  +++ +    +L    + ++G YTLLSNIYA   
Sbjct: 638 ELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANAR 697

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
            W +  ++R +M+ TG+KK PG S +
Sbjct: 698 CWKDVARIRYLMKNTGIKKRPGCSWV 723



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 198/680 (29%), Positives = 332/680 (48%), Gaps = 95/680 (13%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-- 60
           LF  C +L     +H  LLV GL +DP   T +I  Y    S   +  V      P S  
Sbjct: 35  LFHQCKSLASAELIHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRL-HPSSHT 90

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W  LI+  +   F E+ + LY +M R      ++ +P VL+AC  +     G  VH 
Sbjct: 91  VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 150

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR---DVVSWSSIIASYFDNAD 176
            +   GF+ +  +   ++  YG  G  ++AR+VFD+M  R   D+VSW+SI+A+Y    D
Sbjct: 151 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 210

Query: 177 VSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
               +KMF  M  + G+ PD V+++++  AC  + +    + +HG+ LR  +  D  +GN
Sbjct: 211 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGN 270

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK--- 292
           + + MY+KCG +  A + F +++ +   SW AM++ Y++ G F  AL  F K+ E K   
Sbjct: 271 AVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIEL 330

Query: 293 --------------------------------EEPNLITLITVLGSCAGLGWLREGKSVH 320
                                            EPN++TL+++L  CA  G L  GK  H
Sbjct: 331 NVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETH 390

Query: 321 CQIIRKGMGPEYDYLGP------ALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLIS 372
           C  I+  +  + +  G       ALI+ Y++C        +   I   +R++++W +LI 
Sbjct: 391 CHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIG 450

Query: 373 EYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVGSLQLGLQIHGHVI--KI 428
             A+ G + EALEL  QM      +MP++F+++ +L AC  +G+L+ G QIH +V+  + 
Sbjct: 451 GNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRF 510

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           +    FV + LIDMYSK G  + A ++F+ + Q++ V W S++ G+  +G   EA+ +F+
Sbjct: 511 ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFY 570

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY--GVRKDIYIDTALTDMYAK 546
           +M    L  D VTF+  + ACS+ G +++G       I+Y  G+ KD             
Sbjct: 571 EMQKVGLVPDGVTFVVVLYACSHSGMVDQG-------INYFNGMNKDF------------ 611

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            G +  A+             ++ M+D     G+L++A  L + M    +KP    ++ +
Sbjct: 612 -GVVPGAEH------------YACMVDLLSRAGRLDEAMELIRGM---PMKPTPAVWVAL 655

Query: 607 LWACSHSGSVEEGKFYFNAM 626
           L AC    +VE G++  N +
Sbjct: 656 LSACRVYANVELGEYAANQL 675


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/773 (30%), Positives = 383/773 (49%), Gaps = 83/773 (10%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY----- 70
           +HAH+L + L  D   S RLIE YA+  ++ +SR +FD   + D + W  ++  Y     
Sbjct: 27  IHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASE 86

Query: 71  -----------------MWN--------NFFEESIL-LYHKMIREQATISNFIYPSVLRA 104
                             WN        N FE+  L +Y++M RE    ++F   SVL A
Sbjct: 87  LEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSA 146

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           C +L D+  G + HG  IK G D +  +  ++L  Y +  C+ DA + F  +   + VS+
Sbjct: 147 CGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSF 206

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL-----AEACGE---------LC 210
           ++++    D+  V+E  ++F  M+R  +  D V++ S+        CGE         L 
Sbjct: 207 TAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLS 266

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           S    + +H   ++   + D  L NS + MY+K G++ SAE  FV + +    SW  MI+
Sbjct: 267 SDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIA 326

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y +     KA+E   +M     EP+ IT + +L +C   G +  G+             
Sbjct: 327 GYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGR------------- 373

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
                                  ++   +   ++ SWN ++S Y++    KEA++L  +M
Sbjct: 374 -----------------------QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREM 410

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
           Q   + PD  ++A  LS+   +  L+ G Q+H    K   + D ++ S LI MYSKCG  
Sbjct: 411 QFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKV 470

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            +A  +F+RI +  +V WNSM+ G   N    EA   F +M    +   + ++ T +  C
Sbjct: 471 EMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCC 530

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           + +  L +G+ VH ++   G   D ++ +AL DMY+KCGD+  A+ VFD M  +N V+W+
Sbjct: 531 AKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWN 590

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI- 628
            MI  Y  +G  ++A  L++ M+ SG KP+ +TF+ +L ACSHSG V+ G   FN+M+  
Sbjct: 591 EMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQE 650

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
            GVEP + HY C++D L R+G +  A  +I  MP   +  IW  LL+ CR++  + + + 
Sbjct: 651 HGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARR 710

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             +EL      ++  Y LL+NIY+  G WD+   VR +M    + K PGYS I
Sbjct: 711 AAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWI 763



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/622 (24%), Positives = 289/622 (46%), Gaps = 81/622 (13%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+ C       +G+ +H  +++     D  +   ++  Y +   +D +R++FD+M  R
Sbjct: 10  SLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR 69

Query: 160 DVVSWSSIIASY-----FDNADV--------------------------SEGLKMFHSMV 188
           D+ +W++I+ +Y      ++A V                           + L +++ M 
Sbjct: 70  DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMS 129

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           REG  P   T+ S+  ACG L  +   R  HG  ++  +  +  +GN+ + MY+KC  + 
Sbjct: 130 REGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIG 189

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A + F  + +    S+TAM+     S    +A   F  ML  +   + ++L +VLG C+
Sbjct: 190 DAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCS 249

Query: 309 --GLGWLR------------EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
             G G                G+ VHC  I+ G   +  +L  +L++ YA+ G M   E 
Sbjct: 250 RGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDL-HLNNSLLDMYAKNGNMDSAEM 308

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   + E +++SWN++I+ Y +K  S +A+E L +MQ  G  PD  +  + L AC   G 
Sbjct: 309 IFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGD 368

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           ++ G Q                                  +F+ +   S+  WN+++ G+
Sbjct: 369 IEAGRQ----------------------------------MFDGMSSPSLSSWNTILSGY 394

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            QN N  EA+ LF +M    +  D  T    + + + +  LE G+ VH        R DI
Sbjct: 395 SQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDI 454

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           Y+ + L  MY+KCG ++ A+R+FD ++E ++V W++M+    ++    +A + FK+M + 
Sbjct: 455 YLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREK 514

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           G+ P++ ++  +L  C+   S+ +G+   + +   G   D    + ++D+ S+ GD++ A
Sbjct: 515 GMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAA 574

Query: 655 FKMIHSMPFPANGSIWGALLNG 676
            + +  M    N   W  +++G
Sbjct: 575 -RWVFDMMLGKNTVTWNEMIHG 595



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 264/575 (45%), Gaps = 53/575 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R H   +  GL  +      L+  YA+   +  +   F    EP+   +  ++     ++
Sbjct: 158 RCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSD 217

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACS--SLGDLG------------SGEKVHGR 120
              E+  L+  M+R +  + +    SVL  CS    G+ G             G++VH  
Sbjct: 218 QVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCL 277

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            IK GF+ D  +  S+L  Y + G +D A  +F  M    VVSW+ +IA Y   +  S+ 
Sbjct: 278 TIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKA 337

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++    M   G EPD +T +++  AC                                  
Sbjct: 338 IEYLQRMQYHGFEPDEITYVNMLVAC---------------------------------- 363

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
             K GD+ +  + F  +     +SW  ++S Y+++   ++A++ F +M      P+  TL
Sbjct: 364 -IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTL 422

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +L S AG+  L  G+ VH  + +K +     YL   LI  Y++CGK+   +++   I 
Sbjct: 423 AIILSSLAGMMLLEGGRQVHA-VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA 481

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E +I+ WN +++  +   + KEA     +M+  G+ P  FS A+ LS C  + SL  G Q
Sbjct: 482 ELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQ 541

Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H  + +     D FV S+LIDMYSKCG  + A  +F+ +  K+ V WN MI G+ QNG 
Sbjct: 542 VHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGC 601

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDT 538
             EA+ L+  M  +  + D +TF+  + ACS+ G ++ G  + + +   +GV   +   T
Sbjct: 602 GDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYT 661

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
            + D   + G L  A+ + D M  + + + W  ++
Sbjct: 662 CIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLL 696



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 212/512 (41%), Gaps = 82/512 (16%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +E     + SL + C +  +    + IH H+LR ++  D  L N  I  Y+KC  + ++ 
Sbjct: 1   METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60

Query: 252 RTFVKIEKR------------CTT-------------------SWTAMISCYNRSGWFQK 280
           R F ++ KR            C                     SW  +IS   R+G+ QK
Sbjct: 61  RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQK 120

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           AL  + +M      P   TL +VL +C  L  +  G+  H   I+ G+     Y+G AL+
Sbjct: 121 ALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNI-YVGNALL 179

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             YA+C  + +  +    + E N +S+  ++   A      EA  L   M    +  DS 
Sbjct: 180 GMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSV 239

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDC---------------KDEFVQSSLIDMYSK 445
           S++S L  C   G  + GL     V+  D                 D  + +SL+DMY+K
Sbjct: 240 SLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAK 299

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
            G  + A ++F  + + SVV WN MI G+ Q   S +AI    +M  +  E DE+T++  
Sbjct: 300 NGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNM 359

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + AC                                    K GD++  +++FD MS  ++
Sbjct: 360 LVAC-----------------------------------IKSGDIEAGRQMFDGMSSPSL 384

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            SW+ ++  Y  +    +A  LF++M    + P+  T   IL + +    +E G+     
Sbjct: 385 SSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAV 444

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            +      D+   + ++ + S+ G +E A ++
Sbjct: 445 SQKAVFRTDIYLASGLIGMYSKCGKVEMAKRI 476



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 5/177 (2%)

Query: 7   CTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C  L  L++   +H+ +   G   D    + LI+ Y++ G + ++R VFD     ++  W
Sbjct: 530 CAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTW 589

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y  N   +E++LLY  MI          + +VL ACS  G + +G K+   + +
Sbjct: 590 NEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQ 649

Query: 124 -CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVS 178
             G +      T I+ + G  G L +A  + DKM  + D + W  +++S    ADVS
Sbjct: 650 EHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVS 706


>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 748

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/676 (30%), Positives = 365/676 (53%), Gaps = 8/676 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ + +   P  + +L+  Y   G L+++R VFDT  E + F W ++I  Y  NN
Sbjct: 26  QVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTREVFDTLVEKNVFNWTIMIGGYAENN 85

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            FE++I +Y+KM +     +   + ++L+AC+S   L  G K+H  I   GF  D  +  
Sbjct: 86  HFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGFQSDLRLGN 145

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y   G +DDAR VF+ M  RD+++W+ +I     +    E   +F  M REG  P
Sbjct: 146 ALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLFLQMQREGFVP 205

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T LS+  A     +L   + +H H LR  ++ D  +G + + MY++ G +  A   F
Sbjct: 206 DTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTALVHMYARSGSIKDARLVF 265

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL-GSCAGLGWL 313
            K+ +R   +W +MI    + G   +A   F +M      P+ IT + +L  +CA  G L
Sbjct: 266 DKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNILNNACASTGAL 325

Query: 314 REGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  + VH    + G+  ++D  +G AL+  YA+CG M +  +V + + +R+++SW ++I 
Sbjct: 326 QWVRKVHDDAAKVGL--DFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSWTVMIG 383

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
             A+ G  +EA  L +QMQ  G +P+  +  S L+   + G+L+   ++H H +  +   
Sbjct: 384 GLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAELDS 443

Query: 433 EF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
              V ++LI MY+KCG    A L+F+R++ + ++ WN+MI G  QNG+  EA + F +M 
Sbjct: 444 HLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSHFLEMQ 503

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
                 D  T ++ + AC++   L++ K VH   +  G+  D+ + +AL   YAKCG + 
Sbjct: 504 REGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAKCGRID 563

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+ VF+ M+ R++++W+ MI     HG+ ++A SLF QM D G  P+ +T+++IL    
Sbjct: 564 DARLVFEGMASRDIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVPDAITYLSILGGNV 623

Query: 612 HSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA-FKMIHSMPFPANGSI 669
              ++E  K  + +A+R  G + D +  + +V + ++ GDI+ A      +M    +G+ 
Sbjct: 624 SIEALEWVKEVHRHAVRA-GFDTDPRVSSALVHMYTKCGDIDNAKLHFTPNMLPDLDGTA 682

Query: 670 WGALLNGCRIHKRIDV 685
           WG LL+ CR H  +++
Sbjct: 683 WGDLLDACRNHGDVEM 698



 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 177/596 (29%), Positives = 306/596 (51%), Gaps = 10/596 (1%)

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           +I ++ Y  +L+      DL   ++VH  IIK   ++   +   ++  Y   G L + R+
Sbjct: 2   SIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTRE 61

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VFD +  ++V +W+ +I  Y +N    + +++++ M + GV+P+ +T  ++ +AC    +
Sbjct: 62  VFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMA 121

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L+  R IH H+     + D  LGN+ I MY++CG +  A   F  +  R   +W  MI  
Sbjct: 122 LKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGR 181

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVL--GSCAG-LGWLREGKSVHCQIIRKGM 328
             + G   +A   F++M      P+  T +++L   +C G LGW++E   VH   +R G+
Sbjct: 182 LVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKE---VHSHALRAGL 238

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             +   +G AL+  YA  G + +   V   + ERNI++WN +I   A+ G   EA  L  
Sbjct: 239 ESDV-RVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFR 297

Query: 389 QMQTWGLMPDSFSVASSL-SACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKC 446
           QMQ  GL+PD+ +  + L +AC + G+LQ   ++H    K+    D  V ++L+ MY+KC
Sbjct: 298 QMQREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKC 357

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  + A  +F  +  + VV W  MI G  Q+G   EA +LF QM       +  T+L+ +
Sbjct: 358 GSMDDARRVFYGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSIL 417

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
              ++ G LE  K VH   ++  +   + +  AL  MYAKCG ++ A+ VFD M +R+++
Sbjct: 418 NGKASTGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDII 477

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW+AMI     +G   +A S F +M   G  P+  T ++IL AC+ + +++  K   +  
Sbjct: 478 SWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHA 537

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
              G+E DL+  + +V   ++ G I+ A  +   M    +   W  ++ G   H R
Sbjct: 538 LEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGMA-SRDIITWNVMIGGLAQHGR 592



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 1/348 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S   L+ + ++H      GL +D      L+  YA+ GS+  +R VF    + D   W V
Sbjct: 321 STGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSWTV 380

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I     + F  E+  L+ +M RE    +   Y S+L   +S G L   ++VH   +   
Sbjct: 381 MIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAE 440

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D    +  +++  Y + G +++AR VFD+M  RD++SW+++I     N    E    F 
Sbjct: 441 LDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSHFL 500

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M REG  PD  T++S+  AC    +L   + +H H L   ++ D  +G++ +  Y+KCG
Sbjct: 501 EMQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAKCG 560

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            +  A   F  +  R   +W  MI    + G   +A   F++M +V   P+ IT +++LG
Sbjct: 561 RIDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVPDAITYLSILG 620

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +  L   K VH   +R G   +   +  AL+  Y +CG +   +
Sbjct: 621 GNVSIEALEWVKEVHRHAVRAGFDTD-PRVSSALVHMYTKCGDIDNAK 667



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 90/167 (53%)

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           + +D  T++  +Q       L   K VH  +I   + +  Y+   L  +Y +CG LQ  +
Sbjct: 1   ISIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTR 60

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            VFD++ E+NV +W+ MI  Y  +    DA  ++ +M  +G++PNE+TF NIL AC+   
Sbjct: 61  EVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPM 120

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           +++ G+   + +R  G + DL+    ++ + +R G ++ A  + + M
Sbjct: 121 ALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGM 167


>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
          Length = 829

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/751 (30%), Positives = 390/751 (51%), Gaps = 47/751 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L+   ++HA +L  G  Y  +    T+L+  YA+  +L  ++L+F   + 
Sbjct: 71  ILQGCVYERDLSTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRA 130

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA +I         E +++ + +M+       NF+ P+V +AC +L     G  V
Sbjct: 131 RNVFSWAAIIGVRCRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGV 190

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG + K G      + +S+   YG+ G LDDARKVFD++  R VV+W++++  Y  N   
Sbjct: 191 HGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMN 250

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++  +M  EG+EP  VT+ +   A   +  +   +  H   +   +++D  LG S 
Sbjct: 251 QEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSI 310

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y K G +  AE  F ++ ++   +W  +IS Y + G  + A    + M ++    NL
Sbjct: 311 LNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDA----IHMCQLMRRGNL 366

Query: 298 ----ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +TL +++ + A    L+ GK V C  IR G   +   L    +E YA+CG + + +
Sbjct: 367 NFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDI-VLASTAVEMYAKCGSIVDAK 425

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV ++  E++++ WN L++ YA  G+S EAL L  +MQ  G+ P+  +  S +       
Sbjct: 426 KVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVI------- 478

Query: 414 SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
              L L  +G V   + KD F+Q     M S     NL             + W +M+ G
Sbjct: 479 ---LSLLRNGQV--NEAKDMFLQ-----MQSSGISPNL-------------ISWTTMMNG 515

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRK 532
             QNG S EAI    +M  + L ++  +   A+ AC+N+  L  G+ +H  +I +     
Sbjct: 516 LVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHHSS 575

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM- 591
            + I+T+L DMYAKCGD+  A+RVF S     +  ++AMI  Y ++G + +A +L++ + 
Sbjct: 576 SVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATALYRSLD 635

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGD 650
            D GI+P+ +T  N+L AC H+G + +    F  M     ++P L+HY  MVDLL+ +G+
Sbjct: 636 EDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHYGLMVDLLASAGE 695

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
            E A ++I  MP+  +  +  +LL  C    + ++++ + + L  +   ++G Y  +SN+
Sbjct: 696 TEKALRLIEEMPYKPDARMIQSLLASCNKQHKSELVEYLSRHLLESEPENSGNYVTISNV 755

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           YA EG+WDE GK+R +M+V GLKK PG S I
Sbjct: 756 YAVEGSWDEVGKMREMMKVKGLKKKPGCSWI 786



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 4/315 (1%)

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +S+   +S   +KG  +EAL L+ +M +  +          L  C     L  G QIH  
Sbjct: 31  ISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHAR 90

Query: 425 VIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           ++K      K+E++++ L+  Y+KC    +A LLF +++ ++V  W ++I    + G   
Sbjct: 91  ILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGLVE 150

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            A+  F +M  N L  D        +AC  +     G+ VH  +   G+   +++ ++L 
Sbjct: 151 GALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLA 210

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           DMY KCG L  A++VFD + +R VV+W+A++  Y  +G   +A  L   M + GI+P  V
Sbjct: 211 DMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRV 270

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           T    L A ++ G +EEGK       + G+E D      +++   + G IE A +MI   
Sbjct: 271 TVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYA-EMIFDR 329

Query: 662 PFPANGSIWGALLNG 676
               +   W  L++G
Sbjct: 330 MIEKDVVTWNLLISG 344


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/728 (31%), Positives = 389/728 (53%), Gaps = 13/728 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  L  G   D   ++ LI  YA    L SSRLVFD     D   +  +I  YM ++ 
Sbjct: 262 LHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSN 321

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSL-GDLGSGEKVHGRIIKCGFDKDDVIQT 134
           ++E+  ++  M       +     SVL +CS L   +  GE VHG IIK G  +   + +
Sbjct: 322 WKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVS 381

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G LD +  +F   T ++ + W+S+I+ Y  N + +  L  F  M   GV P
Sbjct: 382 ALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAP 441

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T++++   C     L  A+SIH + +R + +    + N+ + MY+ CGD+ ++   F
Sbjct: 442 DATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLF 501

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            K+E R   SW  MIS +   G  + +L  F +M   +   +L+TLI ++ S +      
Sbjct: 502 QKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAI 561

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+SVH   I+ G   +   L  ALI  YA CG +   +++ ++   RN +++N L+S Y
Sbjct: 562 VGESVHSLAIKSGCISDVS-LTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGY 620

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            +  +S++ L L  QM      P+  ++ + L  C +   LQ G  IH + ++   + E 
Sbjct: 621 RKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQS--QLQ-GKCIHSYAVRNFTRLET 677

Query: 435 -VQSSLIDMYSKCGFKNLAY--LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF-HQM 490
            + +S + MYS+  F N+ Y   +F  +  +++++WN+ +    Q   +   ++ F H +
Sbjct: 678 PLFTSAMGMYSR--FNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHML 735

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
           +LN +  DEVT L  I ACS +G  +    +   ++  G   +I +  AL D +++CG +
Sbjct: 736 FLN-VRPDEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSI 794

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ +FDS  E++ V+W AMI+ Y MHG    A  LF  M+DSG+ P+++TF++IL AC
Sbjct: 795 SFARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSAC 854

Query: 611 SHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           SH+G VE+G+  F +++   G+ P ++HYACMVDLL R+G ++ A+ ++ SMPF  + ++
Sbjct: 855 SHNGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNL 914

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
             +LL  CR H    + +++ K L  +    +  Y +LSNIYA  G W +  ++R  ME 
Sbjct: 915 LESLLGACRFHGNYKIGESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEA 974

Query: 730 TGLKKVPG 737
            GL+K  G
Sbjct: 975 KGLRKNVG 982



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 202/689 (29%), Positives = 352/689 (51%), Gaps = 13/689 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVF-DTFK-EPDS 60
           L R   +L+ L  +HA L V G   D    T L+E Y   G   S+ L+F + ++  P  
Sbjct: 47  LLRDTCSLKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAV 106

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           +   ++++C+  + F  E + LY  +    +   NF +P V+RAC++   L  G +VH R
Sbjct: 107 YSLNLVVRCFSDHGFHRELLDLYRGLCGFGS--DNFTFPPVIRACTAASCLQLGRQVHCR 164

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ G   +  +QT++L  Y + G +D +R+VFD M  RD++SW+++++ Y  N    E 
Sbjct: 165 VLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREA 224

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++    M + G+ P+  T++ +   CG         S+H   L+     D  L ++ I M
Sbjct: 225 VETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISM 284

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+   DL S+   F     +   S+ +MIS Y +   +++A E F  M      PNLITL
Sbjct: 285 YAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITL 344

Query: 301 ITVLGSCAGLGW-LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++VL SC+ L + +  G+SVH  II+ G+  +   +  AL+  Y++ GK+     +    
Sbjct: 345 VSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVS-ALVSMYSKLGKLDSSSLLFCCF 403

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+N + WN +IS Y        AL+   +MQ  G+ PD+ +V + +S C     L +  
Sbjct: 404 TEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAK 463

Query: 420 QIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH + ++   +  + V ++L+ MY+ CG  + +Y LF++++ + ++ WN+MI GF + G
Sbjct: 464 SIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIG 523

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +S  ++ LF QM+   +  D VT +  I + S       G+ VH   I  G   D+ +  
Sbjct: 524 DSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTN 583

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  MYA CG ++  Q++F+S   RN ++++A++  Y  +        LF QM+ +  KP
Sbjct: 584 ALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKP 643

Query: 599 NEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N VT +N+L  C    S  +GK  +  A+R F    +   +   + + SR  +IE   + 
Sbjct: 644 NLVTLLNLLPVCQ---SQLQGKCIHSYAVRNF-TRLETPLFTSAMGMYSRFNNIEYC-RT 698

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           I S+    N  +W A L+ C   K+ D++
Sbjct: 699 IFSLVSARNLIVWNAFLSACVQCKQADMV 727


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/708 (31%), Positives = 378/708 (53%), Gaps = 14/708 (1%)

Query: 43  GSLRSSRL-----VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI 97
           G++ SSRL     +FD     D   +  L+  +  +   +E+  L+  + R    +   I
Sbjct: 36  GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + SVL+  ++L D   G ++H + IK GF  D  + TS++ TY +     D RKVFD+M 
Sbjct: 96  FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+VV+W+++I+ Y  N+   E L +F  M  EG +P+  T  +      E         
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H  V++  +    P+ NS I +Y KCG++  A   F K E +   +W +MIS Y  +G 
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +AL  F  M       +  +  +V+  CA L  LR  + +HC +++ G   + + +  
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN-IRT 334

Query: 338 ALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
           AL+  Y++C  M +  ++   IG   N++SW  +IS + +    +EA++L  +M+  G+ 
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLL 455
           P+ F+ +  L+A   +   +    +H  V+K +  +   V ++L+D Y K G    A  +
Sbjct: 395 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI-GQ 514
           F  I  K +V W++M+ G+ Q G +  AI +F ++    ++ +E TF + +  C+     
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           + +GK  H   I   +   + + +AL  MYAK G++++A+ VF    E+++VSW++MI  
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
           Y  HGQ   A  +FK+M    +K + VTF+ +  AC+H+G VEEG+ YF+ M R   + P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             +H +CMVDL SR+G +E A K+I +MP PA  +IW  +L  CR+HK+ ++ +   +++
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 D+  Y LLSN+YAE G+W E  KVR +M    +KK PGYS I
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 183/642 (28%), Positives = 309/642 (48%), Gaps = 48/642 (7%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH   +  G   D    T L+++Y +  + +  R VFD  KE +   W  LI  Y  N+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E + L+ +M  E    ++F + + L   +  G  G G +VH  ++K G DK   +  
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y + G +  AR +FDK   + VV+W+S+I+ Y  N    E L MF+SM    V  
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              +  S+ + C  L  LR    +H  V++     D  +  + +V YSKC  +L A R F
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353

Query: 255 VKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
            +I   C     SWTAMIS + ++   ++A++ F +M      PN  T   +L +   + 
Sbjct: 354 KEIG--CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
                  VH Q+++         +G AL++ Y + GK+ E  KV   I +++I++W+ ++
Sbjct: 412 ----PSEVHAQVVKTNY-ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV-GSLQLGLQIHGHVIKIDC 430
           + YA+ G ++ A+++  ++   G+ P+ F+ +S L+ C     S+  G Q HG  IK   
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526

Query: 431 KDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
                V S+L+ MY+K G    A  +F+R ++K +V WNSMI G+ Q+G +++A+++F +
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    ++MD VTF+    AC++ G +E+G              + Y D  + D    C  
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEG--------------EKYFDIMVRD----CKI 628

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
             T         E N    S M+D Y   GQL  A  + + M +         +  IL A
Sbjct: 629 APT--------KEHN----SCMVDLYSRAGQLEKAMKVIENMPNPA---GSTIWRTILAA 673

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGD 650
           C      E G+    A +I  ++P D   Y  + ++ + SGD
Sbjct: 674 CRVHKKTELGR--LAAEKIIAMKPEDSAAYVLLSNMYAESGD 713



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 152/353 (43%), Gaps = 38/353 (10%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           + +HA ++ T         T L+++Y ++G +  +  VF    + D   W+ ++  Y   
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSL-GDLGSGEKVHGRIIKCGFDKDDVI 132
              E +I ++ ++ +     + F + S+L  C++    +G G++ HG  IK   D    +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            +++L  Y + G ++ A +VF +   +D+VSW+S+I+ Y  +    + L +F  M +  V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           + D VT + +  AC            H  ++    K        F +M   C    + E 
Sbjct: 593 KMDGVTFIGVFAAC-----------THAGLVEEGEKY-------FDIMVRDCKIAPTKEH 634

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL-ITVLGSCAGLG 311
                        + M+  Y+R+G  +KA+    K++E    P   T+  T+L +C    
Sbjct: 635 N------------SCMVDLYSRAGQLEKAM----KVIENMPNPAGSTIWRTILAACRVHK 678

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
               G+    +II   M PE       L   YAE G   E  KV   + ERN+
Sbjct: 679 KTELGRLAAEKII--AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 729


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 237/747 (31%), Positives = 379/747 (50%), Gaps = 40/747 (5%)

Query: 2    PLFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
            P+F+ C    +      LH + +  GL +D   +  L+  YA+ G +R +R++FD     
Sbjct: 765  PVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR 824

Query: 59   DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSV-LRACSSLGDLGSGEKV 117
            D  +W V++K Y+      E++LL+ +  R     + F    V LR  S           
Sbjct: 825  DVVLWNVMMKAYVDTCLEYEAMLLFSEFHR-----TGFRPDDVTLRTLS----------- 868

Query: 118  HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF--DKMTSRDVVSWSSIIASYFDNA 175
              R++KC   K ++++      Y        A K+F  D   S DV+ W+  ++ +    
Sbjct: 869  --RVVKC---KKNILELKQFKAY--------ATKLFMYDDDGS-DVIVWNKALSRFLQRG 914

Query: 176  DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
            +  E +  F  M+   V  D +T + +      L  L   + IHG V+R  +     +GN
Sbjct: 915  EAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGN 974

Query: 236  SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
              I MY K G +  A   F ++ +    SW  MIS    SG  + ++  FV +L     P
Sbjct: 975  CLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLP 1034

Query: 296  NLITLITVLGSCAGL-GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
            +  T+ +VL +C+ L G       +H   ++ G+  +  ++  ALI+ Y++ GKM E E 
Sbjct: 1035 DQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLD-SFVSTALIDVYSKRGKMEEAEF 1093

Query: 355  VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
            +       ++ SWN ++  Y   G   +AL L + MQ  G   D  ++ ++  A G +  
Sbjct: 1094 LFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVG 1153

Query: 415  LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
            L+ G QIH  V+K     D FV S ++DMY KCG    A  +F  I     V W +MI G
Sbjct: 1154 LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISG 1213

Query: 474  FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
              +NG    A+  +HQM L+ ++ DE TF T ++ACS +  LE+G+ +H  ++      D
Sbjct: 1214 CVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFD 1273

Query: 534  IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             ++ T+L DMYAKCG+++ A+ +F   + R + SW+AMI     HG   +A   FK M  
Sbjct: 1274 PFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKS 1333

Query: 594  SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
             G+ P+ VTF+ +L ACSHSG V E    F +M + +G+EP+++HY+C+VD LSR+G IE
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIE 1393

Query: 653  GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
             A K+I SMPF A+ S++  LLN CR+    +  K + ++L     +D+  Y LLSN+YA
Sbjct: 1394 EAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYA 1453

Query: 713  EEGNWDEFGKVRSIMEVTGLKKVPGYS 739
                W+     R++M    +KK PG+S
Sbjct: 1454 AANQWENVASARNMMRKVNVKKDPGFS 1480



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 181/674 (26%), Positives = 319/674 (47%), Gaps = 40/674 (5%)

Query: 15   RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP--DSFMW-AVLIKCYM 71
            R HA +L +G H D   +  LI  YA+ GSL S+R +FDT  +   D   W A+L     
Sbjct: 677  RAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAA 736

Query: 72   WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
              +   +   L+  + R   + +      V + C       + E +HG  +K G   D  
Sbjct: 737  HADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVF 796

Query: 132  IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
            +  +++  Y +FG + +AR +FD M  RDVV W+ ++ +Y D     E + +F    R G
Sbjct: 797  VAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTG 856

Query: 192  VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
              PD VT+ +L+       ++   +    +  +             + MY   G  +   
Sbjct: 857  FRPDDVTLRTLSRVVKCKKNILELKQFKAYATK-------------LFMYDDDGSDV--- 900

Query: 252  RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
                         W   +S + + G   +A++ FV M+  +   + +T + +L   AGL 
Sbjct: 901  -----------IVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLN 949

Query: 312  WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
             L  GK +H  ++R G+  +   +G  LI  Y + G +S    V   + E +++SWN +I
Sbjct: 950  CLELGKQIHGIVMRSGLD-QVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMI 1008

Query: 372  SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV-GSLQLGLQIHGHVIKIDC 430
            S     G+ + ++ + V +    L+PD F+VAS L AC ++ G   L  QIH   +K   
Sbjct: 1009 SGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGV 1068

Query: 431  K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
              D FV ++LID+YSK G    A  LF       +  WN+++ G+  +G+  +A+ L+  
Sbjct: 1069 VLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYIL 1128

Query: 490  MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
            M  +    D++T + A +A   +  L++GK +H  ++  G   D+++ + + DMY KCG+
Sbjct: 1129 MQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGE 1188

Query: 550  LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
            +++A+RVF  +   + V+W+ MI     +GQ   A   + QM  S ++P+E TF  ++ A
Sbjct: 1189 MESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKA 1248

Query: 610  CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE---GAFKMIHSMPFPAN 666
            CS   ++E+G+     +       D      +VD+ ++ G+IE   G FK  ++    + 
Sbjct: 1249 CSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIAS- 1307

Query: 667  GSIWGALLNGCRIH 680
               W A++ G   H
Sbjct: 1308 ---WNAMIVGLAQH 1318



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 148/614 (24%), Positives = 289/614 (47%), Gaps = 48/614 (7%)

Query: 82   LYHKMIREQATISNFIYP------------SVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
            L H  +R   + +N + P            S+LR   +  DL  G++ H RI+  G   D
Sbjct: 631  LMHLRLRAATSTANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPD 690

Query: 130  DVIQTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSIIASYFDNADVS-EGLKMFHS 186
              +  +++  Y + G L  ARK+FD    T+RD+V+W++I+++   +AD S +G  +F  
Sbjct: 691  RFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRL 750

Query: 187  MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
            + R  V     T+  + + C    S   + S+HG+ ++  ++ D  +  + + +Y+K G 
Sbjct: 751  LRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGL 810

Query: 247  LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
            +  A   F  +  R    W  M+  Y  +    +A+  F +       P+ +TL T+   
Sbjct: 811  IREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL--- 867

Query: 307  CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
                      + V C   +K +          L +F A   K+      ++     +++ 
Sbjct: 868  ---------SRVVKC---KKNI--------LELKQFKAYATKL-----FMYDDDGSDVIV 902

Query: 367  WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
            WN  +S + ++G + EA++  V M    +  D  +    L+    +  L+LG QIHG V+
Sbjct: 903  WNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVM 962

Query: 427  KIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
            +    D+ V   + LI+MY K G  + A  +F ++ +  ++ WN+MI G   +G    ++
Sbjct: 963  RSGL-DQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSV 1021

Query: 485  NLFHQMYLNCLEMDEVTFLTAIQACSNI-GQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
             +F  +  + L  D+ T  + ++ACS++ G       +H   +  GV  D ++ TAL D+
Sbjct: 1022 GMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDV 1081

Query: 544  YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
            Y+K G ++ A+ +F +    ++ SW+A++  Y + G    A  L+  M +SG + +++T 
Sbjct: 1082 YSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITL 1141

Query: 604  MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +N   A      +++GK     +   G   DL   + ++D+  + G++E A ++   +P 
Sbjct: 1142 VNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPS 1201

Query: 664  PANGSIWGALLNGC 677
            P +   W  +++GC
Sbjct: 1202 P-DDVAWTTMISGC 1214



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 160/371 (43%), Gaps = 39/371 (10%)

Query: 316  GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE--RNILSWNMLISE 373
            GK  H +I+  G  P+  ++   LI  YA+CG +S   K+     +  R++++WN ++S 
Sbjct: 675  GKRAHARILTSGHHPDR-FVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSA 733

Query: 374  YARKG-MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
             A     S +   L   ++   +     ++A     C    S      +HG+ +KI  + 
Sbjct: 734  LAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793

Query: 432  DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
            D FV  +L+++Y+K G    A +LF+ +  + VV+WN M+  +       EA+ LF + +
Sbjct: 794  DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853

Query: 492  LNCLEMDEVTFLT---AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
                  D+VT  T    ++   NI +L++ K    KL                 MY   G
Sbjct: 854  RTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLF----------------MYDDDG 897

Query: 549  DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
                           +V+ W+  +  +   G+  +A   F  M++S +  + +TF+ +L 
Sbjct: 898  S--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLT 943

Query: 609  ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
              +    +E GK     +   G++  +    C++++  ++G +  A  +   M    +  
Sbjct: 944  VVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN-EVDLI 1002

Query: 669  IWGALLNGCRI 679
             W  +++GC +
Sbjct: 1003 SWNTMISGCTL 1013


>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
 gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
          Length = 732

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/717 (30%), Positives = 380/717 (52%), Gaps = 18/717 (2%)

Query: 4   FRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            R+CT    L    ++HA++  +GL  D  A+  LI  Y +  S   +  +F   + P+ 
Sbjct: 25  LRACTVEGALDDGRKVHAYIRESGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNV 84

Query: 61  FMWAVLIKCY-MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             W  +I  +  + +   ES+LL+ KM  E    +     +VLRAC    +L  G +VHG
Sbjct: 85  VSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDGRQVHG 140

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +++ G   D  +  +++  Y + G +D+A  V  +M  RDV+SW+ +I+ Y  + D  E
Sbjct: 141 YVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKE 200

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           GL+    M ++G+ P  VT  +L  AC     L   +SIH  V+   +  D  + +  + 
Sbjct: 201 GLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLG 260

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG L   +R+  ++ +R T +W  +I  Y R     +AL SF +M     + + +T
Sbjct: 261 MYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVT 320

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            + +LG+C+    L +G  +H  I +  +G E   +  +L   YA+CG +    K+   +
Sbjct: 321 FVLMLGTCSSPAHLAQGILLHDWISQ--LGFESIIVHNSLTAMYAKCGSLDAARKMFEGM 378

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             RN +SWN LIS   + G   +A +   +M+  G  PD  +  S L AC    + + G 
Sbjct: 379 PSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGS 438

Query: 420 QIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH  V++    K   V ++LI MY+K G    A  +F+ + +++ V WN+++  + + G
Sbjct: 439 SIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKG 498

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI-GQLEKGKWVHHKLISYGV--RKDIY 535
            + +A+ +F +M +     D+VT++ A+ ACS + G L  GK +H  ++ +G   R D  
Sbjct: 499 LNRDAVEMFWKMDV---ARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTV 555

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
             TAL +MY KCG LQ A+++FD M  R+VV+W+++I  Y  H ++  A  L K M   G
Sbjct: 556 AATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDG 615

Query: 596 IKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           +K ++V F++IL  C HSG +EEG K++ + +  +G+ P L+HY C++D+L R+G ++ A
Sbjct: 616 VKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLA 675

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
            K++  +P  ++  +W  LL  CR+H   +  K   + +++   +    Y +LSNIY
Sbjct: 676 EKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 732



 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 189/637 (29%), Positives = 323/637 (50%), Gaps = 15/637 (2%)

Query: 78  ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
           +++ LY +M  E     +  + + LRAC+  G L  G KVH  I + G + D     +++
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS-EGLKMFHSMVREGVEPDF 196
             YG+    +DA ++F +M S +VVSW+S+I ++     +  E + +F  M  EG+ P+ 
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           +TM+++  AC    +L   R +HG+VL   + +D  LGN+ + MY K GD+  A+    +
Sbjct: 121 ITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLRE 176

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           + KR   SW  MIS Y +SG  ++ L    +M +    P  +T  T+L +C+    L EG
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEG 236

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           KS+H  ++  G+  + + +   L+  Y +CG + + ++    + ERN ++WN +I  YAR
Sbjct: 237 KSIHRSVVDMGLDRD-EVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYAR 295

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ 436
                +AL    QMQ  G+  D+ +    L  C +   L  G+ +H  + ++  +   V 
Sbjct: 296 YSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESIIVH 355

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           +SL  MY+KCG  + A  +FE +  ++ V WNS+I    Q+G   +A   F +M L    
Sbjct: 356 NSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSR 415

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            DEVT ++ + AC+     ++G  +H  ++  G  K   +  AL  MYAK GD + A+ V
Sbjct: 416 PDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNV 475

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH-SGS 615
           FD+M+ERN VSW+ ++  Y   G   DA  +F +M    +  ++VT++  L ACS  +G 
Sbjct: 476 FDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAALDACSGLAGG 532

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYA--CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
           +  GK     M   G    L   A   +V++  + G ++ A K+   M    +   W +L
Sbjct: 533 LAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEM-LHRDVVTWTSL 591

Query: 674 LNGCRIHKRIDVMKTIEKELSVTG--TNDNGYYTLLS 708
           +     H  I+    + K +   G   +D  + ++LS
Sbjct: 592 IVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILS 628



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 306/618 (49%), Gaps = 22/618 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + + R+C NL    ++H ++L  G+  D      L++ Y + G +  + LV     + D 
Sbjct: 124 VAVLRAC-NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDV 182

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W ++I  Y  +   +E +    +M ++  + +   Y ++L ACSS  DLG G+ +H  
Sbjct: 183 ISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRS 242

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++  G D+D+V+++ +L  YG+ G L+D ++   ++  R+ ++W++II +Y   +D  + 
Sbjct: 243 VVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQA 302

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG----PLGNS 236
           L+ F  M  +GV+ D VT + +   C       PA    G +L   I   G     + NS
Sbjct: 303 LRSFQQMQLQGVKADAVTFVLMLGTCSS-----PAHLAQGILLHDWISQLGFESIIVHNS 357

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
              MY+KCG L +A + F  +  R + SW ++IS   + G +  A + F +M      P+
Sbjct: 358 LTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPD 417

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T I++L +C      +EG S+H  ++  G       +  ALI  YA+ G       V 
Sbjct: 418 EVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTG-VANALIFMYAKLGDHEAARNVF 476

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC-GNVGSL 415
            A+ ERN +SWN +++ Y  KG++++A+E+  +M    +  D  +  ++L AC G  G L
Sbjct: 477 DAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALDACSGLAGGL 533

Query: 416 QLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
             G  IHG+++     +  D    ++L++MY KCG    A  +F+ +  + VV W S+I 
Sbjct: 534 AHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLIV 593

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVR 531
            + Q+    +A+ L   M  + +++D+V FL+ +  C + G LE+G K+    +  YG+ 
Sbjct: 594 AYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGIS 653

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHG--QLNDAASLF 588
             +     + D+  + G L  A+++ D +  R +   W  ++    MHG  +    A+  
Sbjct: 654 PRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARR 713

Query: 589 KQMLDSGIKPNEVTFMNI 606
             +LD  I    V   NI
Sbjct: 714 ITLLDPSIPAAYVVLSNI 731


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/651 (34%), Positives = 356/651 (54%), Gaps = 14/651 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +P +L+     GDL  G+ +H  + K G+  D     +++  YG+F  L DA+ VFD+M 
Sbjct: 81  WPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEML 140

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+ ++W+++I  +    DV    ++   M   G E +  T   + +AC  L +L     
Sbjct: 141 VRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQ 200

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IHG V++R    D  +G S I MYS+CGDL +AE+ +  +  +       MIS Y ++G 
Sbjct: 201 IHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGC 260

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +KA+  F+ +L    EPN  T   V+ +C G   +   + +H   I+ G G E   +G 
Sbjct: 261 GEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEIS-VGN 319

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A++  Y + G + E EK    +GERN++SW  L+S Y + G  K+ALE   Q+   G+  
Sbjct: 320 AIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGF 379

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           DS   A+ L  C    +L LGLQIHG V+K+    D  V ++LID+Y+KC     A L+F
Sbjct: 380 DSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVF 439

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF-----LTAIQACSN 511
             +  K++V +N+++ G Y   +  +A+ LF Q+ L  ++ D VTF     L+A QAC  
Sbjct: 440 HSLLDKNIVSFNAILSG-YIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQAC-- 496

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
              L KGK +H  +I  G   +  +  A+  MYAKCG +  A ++F SM+  + +SW+A+
Sbjct: 497 ---LVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAV 553

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FG 630
           I  Y +HGQ   A  LF++M      P+E+T +++L ACS+SG +EEG   FN M   +G
Sbjct: 554 ISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYG 613

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           ++P+++H+ACMVDLL R+G +  A   I+  PF  +  +W  L++ C++H  ++  +   
Sbjct: 614 IKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIAS 673

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K L      + G Y L+SN+YA  G  +E  +VR++M    + K  G S I
Sbjct: 674 KHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWI 724



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 166/589 (28%), Positives = 291/589 (49%), Gaps = 7/589 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA L   G   D      L+  Y +   L  ++ VFD     ++  W  LIK ++  N 
Sbjct: 100 IHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVND 159

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E    +  +M       +      +L+AC SL +L  GE++HG +IK GFD+D  + TS
Sbjct: 160 VESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTS 219

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y   G L  A KV+  +  +DV   + +I+ Y       + + +F  ++  G+EP+
Sbjct: 220 LISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPN 279

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  ++  AC     +   R +HG  ++     +  +GN+ + +Y K G L  AE++F 
Sbjct: 280 DYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFC 339

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +R   SWTA++S Y ++G  +KALE F ++LE+    +     T+L  C+    L  
Sbjct: 340 GMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGL 399

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  +H  +++ G   +   +G ALI+ YA+C K+     V H++ ++NI+S+N ++S Y 
Sbjct: 400 GLQIHGFVVKLGYVHDVS-VGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI 458

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
                ++A+ L  Q++   + PDS + A  LS   +   L  G  +H ++IK   + +  
Sbjct: 459 GAD-EEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPS 517

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V +++I MY+KCG    A  LF  +     + WN++I  +  +G   +A+ LF +M    
Sbjct: 518 VGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEE 577

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTA 553
              DE+T L+ +QACS  G LE+G  + + + S YG++ +I     + D+  + G L  A
Sbjct: 578 FVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEA 637

Query: 554 QRVFD-SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
               + S    + + W  ++    +HG LN      K +LD  + P E 
Sbjct: 638 MSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLD--LAPEEA 684



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 227/475 (47%), Gaps = 8/475 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C +L  L R   +H  ++  G   D    T LI  Y+  G L ++  V+      D
Sbjct: 185 ILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
                 +I  Y      E++I ++  ++      +++ + +V+ AC+   D+     +HG
Sbjct: 245 VRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHG 304

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IKCG   +  +  +I+  Y + G L++A K F  M  R++VSW+++++ Y  N +  +
Sbjct: 305 MCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKK 364

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+ F  ++  GV  D     +L + C E  +L     IHG V++     D  +G + I 
Sbjct: 365 ALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALID 424

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y+KC  L SA   F  +  +   S+ A++S Y  +   + A+  F ++     +P+ +T
Sbjct: 425 LYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADE-EDAMALFSQLRLADIKPDSVT 483

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L   A    L +GK +H  II+ G       +G A+I  YA+CG + +  ++ +++
Sbjct: 484 FARLLSLSADQACLVKGKCLHAYIIKTGFEAN-PSVGNAVITMYAKCGSIGDACQLFYSM 542

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              + +SWN +IS YA  G  ++AL L  +M+    +PD  ++ S L AC   G L+ G 
Sbjct: 543 NYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGF 602

Query: 420 QIHGHV-IKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
            +   +  K   K E    + ++D+  + G+ + A     R     S ++W +++
Sbjct: 603 CLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLV 657


>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
 gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
          Length = 779

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/705 (30%), Positives = 375/705 (53%), Gaps = 15/705 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY-MWN 73
           ++HAH+   GL  D  A+  LI  Y +  S   +  +F   + P+   W  +I  +  + 
Sbjct: 80  KVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYG 139

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
           +   ES+LL+ KM  E    +     +VLRAC    +L  G +VHG +++ G   D  + 
Sbjct: 140 HLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLG 195

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y + G +D+A  V  +M  RDV+SW+ +I+ Y  + D  EGL+    M ++G+ 
Sbjct: 196 NALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLS 255

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P  VT  +L  AC     L   +SIH  V+   +  D  + +  + MY KCG L   +R+
Sbjct: 256 PTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRS 315

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
             ++ +R T +W  +I  Y R     +AL SF +M     + + +T + +LG+C+    L
Sbjct: 316 SCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHL 375

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +G  +H  I +  +G E   +  +L   YA+CG +    K+   +  RN +SWN L+S 
Sbjct: 376 AQGILLHDWISQ--LGFESIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSA 433

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KD 432
             + G   +A +   +M+  G  PD  +  S L AC    + + G  IH  V++    K 
Sbjct: 434 AIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKR 493

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V ++LI MY+K G    A  +F+ + +++ V WN+++  + + G + +A+ +F +M +
Sbjct: 494 TGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMDV 553

Query: 493 NCLEMDEVTFLTAIQACSNI-GQLEKGKWVHHKLISYGV--RKDIYIDTALTDMYAKCGD 549
                D+VT++ A+ ACS + G L  GK +H  ++ +G   R D    TAL +MY KCG 
Sbjct: 554 ---ARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGS 610

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           LQ A+++FD M  R+VV+W+++I  Y  H ++  A  L K M   G+K ++V F++IL  
Sbjct: 611 LQEARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSG 670

Query: 610 CSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           C HSG +EEG K++ + +  +G+ P L+HY C++D+L R+G ++ A K++  +P  ++  
Sbjct: 671 CDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSK 730

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           +W  LL  CR+H   +  K   + +++   +    Y +LSNIY +
Sbjct: 731 VWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIYTQ 775



 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 194/663 (29%), Positives = 334/663 (50%), Gaps = 18/663 (2%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN-NFFEESILLYHKMIREQATISNFI 97
           Y + G L ++  VF          W+ L+  Y  + N   +++ LY +M  E     +  
Sbjct: 2   YGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSVT 61

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + + L+AC+  G LG G KVH  I + G + D     +++  YG+    +DA ++F +M 
Sbjct: 62  FVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRME 121

Query: 158 SRDVVSWSSIIASYFDNADVS-EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
           S +VVSW+S+I ++     +  E + +F  M  EG+ P+ +TM+++  AC    +L   R
Sbjct: 122 SPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDGR 177

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            +HG+VL   + +D  LGN+ + MY K G +  A+    ++ KR   SW  MIS Y +SG
Sbjct: 178 QVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSG 237

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             ++ L    +M +    P  +T  T+L +C+    L EGKS+H  ++  G+  + + + 
Sbjct: 238 DCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRD-EVVK 296

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
             L+  Y +CG + + ++    + ERN ++WN +I  YAR     +AL    QMQ  G+ 
Sbjct: 297 SFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVK 356

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
            D+ +    L  C +   L  G+ +H  + ++  +   V +SL  MY+KCG  + A  +F
Sbjct: 357 ADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESIIVHNSLTAMYAKCGSLDAARKMF 416

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E +  ++ V WNS++    Q+G   +A   F +M L     DEVT ++ + AC+     +
Sbjct: 417 EEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAK 476

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +G  +H  ++  G  K   +  AL  MYAK GD + A+ VFD+M+ERN VSW+ ++  Y 
Sbjct: 477 EGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYV 536

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH-SGSVEEGKFYFNAMRIFGVEPDL 635
             G   DA  +F +M    +  ++VT++  L ACS  +G +  GK     M   G    L
Sbjct: 537 EKGLNRDAVEMFWKM---DVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRL 593

Query: 636 QHYA--CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID----VMKTI 689
              A   +V++  + G ++ A K+   M    +   W +L+     H  I+    ++K +
Sbjct: 594 DTVAATALVNMYGKCGSLQEARKIFDGM-LHRDVVTWTSLIVAYAQHSEIEQALKLVKIM 652

Query: 690 EKE 692
           E+E
Sbjct: 653 EQE 655



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/618 (27%), Positives = 305/618 (49%), Gaps = 22/618 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + + R+C NL    ++H ++L  G+  D      L++ Y + G +  + +V     + D 
Sbjct: 165 VAVLRAC-NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDV 223

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W ++I  Y  +   +E +    +M ++  + +   Y ++L ACSS  DLG G+ +H  
Sbjct: 224 ISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRS 283

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++  G D+D+V+++ +L  YG+ G L+D ++   ++  R+ ++W++II +Y   +D  + 
Sbjct: 284 VVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQA 343

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG----PLGNS 236
           L+ F  M  EGV+ D VT + +   C       PA    G +L   I   G     + NS
Sbjct: 344 LRSFQQMQLEGVKADAVTFVLMLGTCSS-----PAHLAQGILLHDWISQLGFESIIVHNS 398

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
              MY+KCG L +A + F ++  R + SW +++S   + G    A + F +M      P+
Sbjct: 399 LTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPD 458

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T I++L +C      +EG S+H  ++  G       +  ALI  YA+ G       V 
Sbjct: 459 EVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTG-VANALIFMYAKLGDHEAARNVF 517

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC-GNVGSL 415
            A+ ERN +SWN +++ Y  KG++++A+E+  +M    +  D  +  ++L AC G  G L
Sbjct: 518 DAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALDACSGLAGGL 574

Query: 416 QLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
             G  IHG+++     +  D    ++L++MY KCG    A  +F+ +  + VV W S+I 
Sbjct: 575 AHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGMLHRDVVTWTSLIV 634

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVR 531
            + Q+    +A+ L   M    +++D+V FL+ +  C + G LE+G K+    +  YG+ 
Sbjct: 635 AYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGIS 694

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHG--QLNDAASLF 588
             +     + D+  + G L  A+++ D +  R +   W  ++    MHG  +    A+  
Sbjct: 695 PRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARR 754

Query: 589 KQMLDSGIKPNEVTFMNI 606
             +LD  I    V   NI
Sbjct: 755 ITLLDPSIPAAYVVLSNI 772



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 230/445 (51%), Gaps = 12/445 (2%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY-NRSGWFQKALESFVKMLEVKEEPNLI 298
           MY KCGDL +A   F K++     +W+A++  Y N      +ALE + +M      P+ +
Sbjct: 1   MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           T +T L +C   G L +G+ VH  I  + +G E D Y   ALI  Y +C    +  ++  
Sbjct: 61  TFVTCLKACTVEGALGDGRKVHAHI--RELGLETDIYAANALINMYGKCRSPEDAFQLFS 118

Query: 358 AIGERNILSWNMLISEYARKG-MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
            +   N++SW  +I  +A+ G + +E++ L  +M+  G+ P+  ++ + L AC    +L 
Sbjct: 119 RMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLT 174

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G Q+HG+V++     D  + ++L+DMY K G  + A ++   + ++ V+ WN MI G+ 
Sbjct: 175 DGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYA 234

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           Q+G+  E +    +M  + L   +VT+ T + ACS+   L +GK +H  ++  G+ +D  
Sbjct: 235 QSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEV 294

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + + L  MY KCG L+  +R    + ERN ++W+ +I  Y  +     A   F+QM   G
Sbjct: 295 VKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEG 354

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           +K + VTF+ +L  CS    + +G    + +   G E  + H + +  + ++ G ++ A 
Sbjct: 355 VKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESIIVHNS-LTAMYAKCGSLDAAR 413

Query: 656 KMIHSMPFPANGSIWGALLNGCRIH 680
           KM   MP   N   W +L++    H
Sbjct: 414 KMFEEMP-SRNSVSWNSLMSAAIQH 437


>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/560 (36%), Positives = 333/560 (59%), Gaps = 5/560 (0%)

Query: 184  FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
             H +  +G  P+F T+    +ACG L +L   R +HG V++  +     + +S + MYSK
Sbjct: 555  MHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSK 614

Query: 244  CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
            CG+   A R+F ++  +   SWT+MIS Y+R GW  + ++ F +ML     P+ I +  +
Sbjct: 615  CGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCM 674

Query: 304  LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
            L S +    + E K+ H  IIR+    +   +  AL+  Y + G +   EK    + E+N
Sbjct: 675  LSSFSNSMRVFEAKAFHGLIIRRHYTLD-QMVQNALLSMYCKFGFLKLAEKFFGRVNEQN 733

Query: 364  ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
              +WN+++S Y + G+  + + L  +MQ  G+  DS S+ S +S+C  +G+  L   IH 
Sbjct: 734  FEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHC 793

Query: 424  HVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
            ++IK +  DE   V +SLIDMY K G   +A  +F RI  + +V WN++I  +   G+  
Sbjct: 794  YMIK-NLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFA 851

Query: 482  EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            EA++L+ +M L  L+ +  T +  + ACS++  LE+G+ VH+ +       ++ I TAL 
Sbjct: 852  EALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALI 911

Query: 542  DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
            DMYAKCG L+ ++ +F+SM ER+V++W+ MI  YGMHG    A   F+QM +S  KPN +
Sbjct: 912  DMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGL 971

Query: 602  TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            TF+ +L AC+H+G V+EGK+ F  M+ + V P+L+HYACMVDLL RSG+++ A  ++ SM
Sbjct: 972  TFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSM 1031

Query: 662  PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
            P   +G +WGALL+ C+IH  I++   I K    +   ++GYY ++SN+Y+  G W+E  
Sbjct: 1032 PISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMISNMYSSIGKWEEAE 1091

Query: 722  KVRSIMEVTGLKKVPGYSTI 741
            K R IM+  G++K  G+S +
Sbjct: 1092 KARGIMKERGVRKKTGWSAV 1111



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 287/534 (53%), Gaps = 9/534 (1%)

Query: 102  LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
             +AC +LG L  G  +HG ++K G D   V+Q+S+L  Y + G  ++A + F ++ ++D+
Sbjct: 574  FQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDI 633

Query: 162  VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
            +SW+S+I++Y      +E + MF  M+  G+ PD + +  +  +      +  A++ HG 
Sbjct: 634  ISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGL 693

Query: 222  VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
            ++RR   +D  + N+ + MY K G L  AE+ F ++ ++   +W  M+S Y + G   K 
Sbjct: 694  IIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKC 753

Query: 282  LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
            +  F +M  +  E +  +L++V+ SC+ LG     +S+HC +I K +  E   +  +LI+
Sbjct: 754  IGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMI-KNLMDENVSVNNSLID 812

Query: 342  FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
             Y + G ++   ++   I  R+I++WN LIS YA  G   EAL L  +M    L P+S +
Sbjct: 813  MYGKSGNLTIARRIFCRI-PRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSAT 871

Query: 402  VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF---VQSSLIDMYSKCGFKNLAYLLFER 458
            +   LSAC ++ SL+ G ++H ++     K EF   + ++LIDMY+KCG    +  +F  
Sbjct: 872  LVXVLSACSHLASLEEGEKVHNYI--NGGKFEFNLSIATALIDMYAKCGQLEKSREIFNS 929

Query: 459  IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
            + ++ V+ WN MI G+  +G++  AI  F QM  +  + + +TFL  + AC++ G +++G
Sbjct: 930  MHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEG 989

Query: 519  KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGM 577
            K++  K+  Y V  ++     + D+  + G+LQ A+ +  SM    +   W A++    +
Sbjct: 990  KYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKI 1049

Query: 578  HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
            H ++     + K  + S ++ N+  ++ I    S  G  EE +     M+  GV
Sbjct: 1050 HNEIEMGIRIAKHAIXSDVE-NDGYYVMISNMYSSIGKWEEAEKARGIMKERGV 1102



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 270/581 (46%), Gaps = 56/581 (9%)

Query: 4    FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            F++C NL  L     LH  ++ TG+ Y     + L+  Y++ G+   +   F      D 
Sbjct: 574  FQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDI 633

Query: 61   FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
              W  +I  Y    +  E I ++ +M+         +   +L + S+   +   +  HG 
Sbjct: 634  ISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGL 693

Query: 121  IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            II+  +  D ++Q ++L  Y +FG L  A K F ++  ++  +W+ +++ Y     + + 
Sbjct: 694  IIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKC 753

Query: 181  LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            + +F  M   G+E D  +++S+  +C +L +   ARSIH ++++  +  +  + NS I M
Sbjct: 754  IGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDM 813

Query: 241  YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            Y K G+L  A R F +I +   T W  +IS Y   G F +AL  + KM+    +PN  TL
Sbjct: 814  YGKSGNLTIARRIFCRIPRDIVT-WNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATL 872

Query: 301  ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIH 357
            + VL +C+ L  L EG+ VH  I     G ++++   +  ALI+ YA+CG++ +  ++ +
Sbjct: 873  VXVLSACSHLASLEEGEKVHNYI----NGGKFEFNLSIATALIDMYAKCGQLEKSREIFN 928

Query: 358  AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            ++ ER++++WN++IS Y   G ++ A+E   QM+     P+  +  + LSAC + G ++ 
Sbjct: 929  SMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKE 988

Query: 418  GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV----MWNSMICG 473
            G                                    LF ++Q  SV      +  M+  
Sbjct: 989  G----------------------------------KYLFGKMQDYSVAPNLKHYACMVDL 1014

Query: 474  FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
              ++GN  EA  L   M ++    D   +   + +C    ++E G  +    I   V  D
Sbjct: 1015 LGRSGNLQEAEALVLSMPISP---DGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVEND 1071

Query: 534  IYIDTALTDMYAKCGDLQTAQRVFDSMSERNV---VSWSAM 571
             Y    +++MY+  G  + A++    M ER V     WSA+
Sbjct: 1072 GYY-VMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 1111



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 267/609 (43%), Gaps = 58/609 (9%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           L  C+S  D+ + EKV   I K   D D V  +S+   Y + G LD A    ++M  R  
Sbjct: 233 LTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTS 292

Query: 162 ----VSWSSIIASYFDNAD---VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
               +++SS+I+ + +  D   V    K   S+  +  + ++  M+S     GE      
Sbjct: 293 RKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGE---FEE 349

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR----CTTSWTAMIS 270
           A +++          D  + N  +  Y    ++  AE+ + ++ +R      T+W  +  
Sbjct: 350 AENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTW 409

Query: 271 CYNRSGWFQKALESFVKML-EVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
            Y +    +K L+ F K +  VK+  P+   +  V  +    G + EG      I+RK  
Sbjct: 410 GYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNI-EGAEKVLVILRKA- 467

Query: 329 GPEYDYLGPALIEFYAECGKM----------------SECEKVIHAIGE----------- 361
           G     +   L+  YA+ GKM                 E  ++I    +           
Sbjct: 468 GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCXVQRLDPLL 527

Query: 362 ----RNILSWNMLISEYARKGMSKEALELLVQMQTW---GLMPDSFSVASSLSACGNVGS 414
               RN+  W   ++     G SK  LE L +M      G  P+  ++     ACGN+G+
Sbjct: 528 CICIRNVEFWRRHMN-----GESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGA 582

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L  G  +HG V+K      + VQSSL+ MYSKCG    A+  F  +  K ++ W SMI  
Sbjct: 583 LLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISA 642

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + + G + E I++F +M ++ +  D +     + + SN  ++ + K  H  +I      D
Sbjct: 643 YSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLD 702

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             +  AL  MY K G L+ A++ F  ++E+N  +W+ M+  YG  G +     LF++M  
Sbjct: 703 QMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQC 762

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            GI+ +  + ++++ +CS  G+    +     M    ++ ++     ++D+  +SG++  
Sbjct: 763 LGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTI 822

Query: 654 AFKMIHSMP 662
           A ++   +P
Sbjct: 823 ARRIFCRIP 831



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 130/567 (22%), Positives = 241/567 (42%), Gaps = 41/567 (7%)

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           FFE+   L  KM + Q T +  ++  V    S        E +  ++ +CGF K  +   
Sbjct: 146 FFED---LSDKM-KGQPTCTALLHTYVQNKVSE-----KAEALMEKMSECGFLKCPLPYN 196

Query: 135 SILCTYGEFGCLDDAR---KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
            ++  Y   G L+      +   K TS DVV+++  +       DV    K+   + +  
Sbjct: 197 HMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAK 256

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           ++PD+VT  SL     +   L  A +    + +R  +      +S I +++   D     
Sbjct: 257 IDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVH 316

Query: 252 RTFVKIE----KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
           R + K++    K     +T MIS   + G F++A   + +   V    +      +L + 
Sbjct: 317 RIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAY 376

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI----HAIGERN 363
                +   +  + Q++ +G+ P Y         +     K  + EKV+     A+G  +
Sbjct: 377 INKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYL----KKKQMEKVLDYFEKAVG--S 430

Query: 364 ILSWN---MLISEYAR----KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           +  WN    L+ E  +    +G  + A ++LV ++  G +         L A    G + 
Sbjct: 431 VKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEI-YNWLLRAYAKAGKMP 489

Query: 417 LGLQIHGHVIKIDCKDEFVQSSLIDMYSK-CGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           L +       K++  +E     LI   SK C  + L  LL   I  ++V  W   + G  
Sbjct: 490 LIVAEWMKKDKVEMDEE--THRLIKETSKMCXVQRLDPLLC--ICIRNVEFWRRHMNGES 545

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           + G  LE +   H++  +    +  T     QAC N+G L +G+ +H  ++  G+     
Sbjct: 546 KMG--LECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQV 603

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + ++L  MY+KCG+ + A R F  +  ++++SW++MI  Y   G   +   +F +ML SG
Sbjct: 604 VQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSG 663

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFY 622
           I P+ +    +L + S+S  V E K +
Sbjct: 664 IYPDGIVISCMLSSFSNSMRVFEAKAF 690


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/703 (31%), Positives = 379/703 (53%), Gaps = 20/703 (2%)

Query: 50  LVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
           L F TF  P+     ++ +  + N    ++I     M+ + +      Y   L+ C    
Sbjct: 23  LQFPTFTNPNPLTGRLIQE--INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTR 80

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSII 168
               G  VH ++ +     D V   S++  Y + G  + A  +F  M +SRD++SWS+++
Sbjct: 81  SFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMV 140

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-I 227
           + + +N      L  F  M+  G  P+     +   AC     +    SI G V++   +
Sbjct: 141 SCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYL 200

Query: 228 KIDGPLGNSFIVMYSKC-GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           + D  +G   I M+ K  GDL+SA + F K+ +R   +WT MI+   + G+  +A++ F+
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFL 260

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           +M+    EP+  TL  V+ +CA +  L  G+ +H Q IR G+  +   +G  LI  YA+C
Sbjct: 261 EMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD-RCVGCCLINMYAKC 319

Query: 347 ---GKMSECEKVIHAIGERNILSWNMLISEYARKG-MSKEALELLVQMQTWGLMPDSFSV 402
              G M    K+   I + N+ SW  +I+ Y +KG   +EAL+L   M    ++P+ F+ 
Sbjct: 320 SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTF 379

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIK-----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           +S+L AC N+ +L++G Q+  H +K     ++C    V +SLI MY++ G  + A   F+
Sbjct: 380 SSTLKACANLAALRIGEQVFTHAVKLGFSSVNC----VANSLISMYARSGRIDDARKAFD 435

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            + +K+++ +N++I  + +N NS EA+ LF+++    +     TF + +   ++IG + K
Sbjct: 436 ILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK 495

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H ++I  G++ +  +  AL  MY++CG++++A +VF+ M +RNV+SW+++I  +  
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQ 636
           HG    A  LF +ML+ G++PN VT++ +L ACSH G V EG  +F +M    GV P ++
Sbjct: 556 HGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRME 615

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYACMVD+L RSG +  A + I+SMP+ A+  +W   L  CR+H  +++ K   K +   
Sbjct: 616 HYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQ 675

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +D   Y LLSN+YA    WDE   +R  M+   L K  G S
Sbjct: 676 EPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCS 718



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 216/415 (52%), Gaps = 15/415 (3%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEM---GSLRSSRLVFDTFKEPD 59
           +C N+  L    +LH+  +  GL  D      LI  YA+    GS+ ++R +FD   + +
Sbjct: 280 ACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHN 339

Query: 60  SFMWAVLIKCYMWNNFF-EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
            F W  +I  Y+    + EE++ L+  MI      ++F + S L+AC++L  L  GE+V 
Sbjct: 340 VFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +K GF   + +  S++  Y   G +DDARK FD +  ++++S++++I +Y  N +  
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L++F+ +  +G+     T  SL      + ++     IH  V++  +K++  + N+ I
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYS+CG++ SA + F  +E R   SWT++I+ + + G+  +ALE F KMLE    PNL+
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLV 579

Query: 299 TLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           T I VL +C+ +G + EG K         G+ P  ++    +++     G +SE  + I+
Sbjct: 580 TYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYA-CMVDILGRSGSLSEAIQFIN 638

Query: 358 AIGER-NILSWNMLISEYARKG---MSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           ++  + + L W   +      G   + K A +++++ +     P ++ + S+L A
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHD--PAAYILLSNLYA 691



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 242/528 (45%), Gaps = 38/528 (7%)

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G L S+  VF+   E ++  W ++I   M   +  E+I L+ +MI        F    V+
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVI 278

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF---GCLDDARKVFDKMTSR 159
            AC+++  L  G+++H + I+ G   D  +   ++  Y +    G +  ARK+FD++   
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338

Query: 160 DVVSWSSIIASYFDNADV-SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           +V SW+++I  Y        E L +F  M+   V P+  T  S  +AC  L +LR    +
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
             H ++        + NS I MY++ G +  A + F  + ++   S+  +I  Y ++   
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++ALE F ++ +     +  T  ++L   A +G + +G+ +H ++I+ G+         A
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN-A 517

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI  Y+ CG +    +V   + +RN++SW  +I+ +A+ G + +ALEL  +M   G+ P+
Sbjct: 518 LISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPN 577

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
             +  + LSAC +VG +  G +                     MY++ G       +  R
Sbjct: 578 LVTYIAVLSACSHVGLVNEGWK-----------------HFKSMYTEHG-------VIPR 613

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           ++      +  M+    ++G+  EAI   + M     + D + + T + AC   G LE G
Sbjct: 614 MEH-----YACMVDILGRSGSLSEAIQFINSM---PYKADALVWRTFLGACRVHGNLELG 665

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
           K    K+I      D      L+++YA          +  +M E+N++
Sbjct: 666 KHA-AKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLI 712


>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/706 (31%), Positives = 387/706 (54%), Gaps = 21/706 (2%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNF---IYPSVLRACSS 107
           + D+   P + +W  +I  ++ NN   +++LLY KM R  ++ S F    + S L+AC+ 
Sbjct: 71  LLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKM-RSNSSCSTFDPYTFSSTLKACAL 129

Query: 108 LGDLGSGEKVHGRIIKCGFDKDD----VIQTSILCTYGEFGCLDD-ARKVFDKMTSRDVV 162
             D+ +G+ +H   ++   + +     ++  S+L  Y    C  + A  VFD M  R+VV
Sbjct: 130 TKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYA--SCQHEYALNVFDVMRRRNVV 187

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           +W+++I S+       + ++ F +M+ + V P  VT ++L  A  +L   R  +  +G +
Sbjct: 188 AWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFM 247

Query: 223 LR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            +   +   D  + +S I+M+S  G +  A   F +   + T  W  MI  Y ++    +
Sbjct: 248 RKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVE 307

Query: 281 ALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           A++ F++ LE +E   + +TL++VL + + L  ++  +  H  +I+   G     L   +
Sbjct: 308 AIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVM 367

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           +  Y+ C  +    KV   + ER+ +SWN +IS + + G  +EAL L+ +MQ    + DS
Sbjct: 368 V-MYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDS 426

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFER- 458
            +  + LSA  N+ +L +G Q H ++I+   + E ++S LIDMY+K G    A LLFE+ 
Sbjct: 427 VTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQN 486

Query: 459 -IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
               +    WN++I G+ QNG + +AI L  QM +  +  + VT  + + ACS++G +  
Sbjct: 487 CSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGL 546

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
            + +H   I   + K++Y+ T+LTD Y+KCG +  A+ VF    E+N V+++ M+ CYG 
Sbjct: 547 ARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQ 606

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           HG    A +L+  ML SGI+P+ VTF+ IL AC++SG V+EG   F +M ++  ++P ++
Sbjct: 607 HGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIE 666

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRIDVMKTIEKELSV 695
           HY C+ D+L R G +  A++ +  +   AN   IWG+LL  CR H   ++ K + K+L  
Sbjct: 667 HYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLN 726

Query: 696 TGTNDN--GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            G +    GY+ LLSNIYAEEG W++  +VR  M+  GL K  G S
Sbjct: 727 MGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCS 772



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/594 (25%), Positives = 280/594 (47%), Gaps = 63/594 (10%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQATISNFI 97
           ++++G +  +R+VFD     ++ +W  +I  Y+ NN   E+I ++ + +  E+    +  
Sbjct: 268 FSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVT 327

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
             SVL A S L  +   E+ H  +IK       +I  +++  Y     +D + KVFDKM 
Sbjct: 328 LLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKML 387

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RD VSW++II+++  N    E L +   M ++    D VT  +L  A   L +L   + 
Sbjct: 388 ERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQ 447

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT-----SWTAMISCY 272
            H +++RR I+ +G + +  I MY+K G + +AE  F   E+ C++     +W A+I+ Y
Sbjct: 448 THAYLIRRGIQFEG-MESYLIDMYAKSGSIRTAELLF---EQNCSSDRDQATWNAIIAGY 503

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            ++G  +KA+    +ML     PN +TL ++L +C+ +G +   + +H   IR+ +    
Sbjct: 504 TQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNV 563

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            Y+G +L + Y++CG +S  E V     E+N +++  ++  Y + GM K AL L   M  
Sbjct: 564 -YVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLR 622

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS--SLIDMYSKCGFKN 450
            G+ PD+ +  + LSAC   G +  GLQI   + K+      ++    + DM  + G   
Sbjct: 623 SGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVG--- 679

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
                        VV     + G  ++ N++E                   + + + +C 
Sbjct: 680 ------------RVVEAYEFVKGLGEDANTME------------------IWGSLLGSCR 709

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIY-IDTALTDMYAKCGDLQTAQRVFDSMSERNV---- 565
           N G  E GK V  KL++ G+ K +      L+++YA+ G+ +   RV   M E+ +    
Sbjct: 710 NHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKET 769

Query: 566 -VSW---SAMIDCYGMHGQLNDAASLFKQMLD--------SGIKPNEVTFMNIL 607
             SW   +  ++C+    + +  +S    MLD        +G KP     +N +
Sbjct: 770 GCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKPQYSLNLNTI 823



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 168/368 (45%), Gaps = 40/368 (10%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT--FKE 57
           L  + +NLR L    + HA+L+  G+ ++   S  LI+ YA+ GS+R++ L+F+     +
Sbjct: 432 LLSAASNLRNLYVGKQTHAYLIRRGIQFEGMES-YLIDMYAKSGSIRTAELLFEQNCSSD 490

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W  +I  Y  N   E++ILL  +M+ +    +     S+L ACSS+G +G   ++
Sbjct: 491 RDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQL 550

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG  I+   +K+  + TS+  TY + G +  A  VF +   ++ V++++++  Y  +   
Sbjct: 551 HGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMG 610

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
              L ++ SM+R G+ PD VT +++  AC                        G +    
Sbjct: 611 KRALTLYDSMLRSGIRPDAVTFVAILSACN---------------------YSGLVDEGL 649

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
            +  S    +    +    IE  C  +         R G   +A E FVK L   E+ N 
Sbjct: 650 QIFES----MEKVHKIKPSIEHYCCVA-----DMLGRVGRVVEAYE-FVKGL--GEDANT 697

Query: 298 ITLI-TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           + +  ++LGSC   G    GK+V  +++  GM          L   YAE G+  + ++V 
Sbjct: 698 MEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVR 757

Query: 357 HAIGERNI 364
             + E+ +
Sbjct: 758 KQMKEKGL 765



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 21/265 (7%)

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN--CLEMDEVTFLT 504
           G  +LA  L + + + S V+WNS+I GF  N    +A+ L+ +M  N  C   D  TF +
Sbjct: 63  GQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSS 122

Query: 505 AIQACSNIGQLEKGKWVH------HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
            ++AC+    +  GK +H      H   + G  + +Y   +L +MYA C   + A  VFD
Sbjct: 123 TLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVY--NSLLNMYASCQH-EYALNVFD 179

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M  RNVV+W+ +I  +    +   A   F  M++  + P+ VTF+N+  A S  G    
Sbjct: 180 VMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRT 239

Query: 619 GKFYFNAMRIFGVE--PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL-- 674
            K ++  MR FG +   D+   +  + + S  G ++ A +M+       N  IW  ++  
Sbjct: 240 VKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYA-RMVFDRCLNKNTEIWNTMIVA 298

Query: 675 ---NGCRIHKRIDV-MKTIEKELSV 695
              N C + + IDV ++ +E E  V
Sbjct: 299 YVQNNCPV-EAIDVFIQALESEEGV 322


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/616 (33%), Positives = 340/616 (55%), Gaps = 20/616 (3%)

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +D+  T  LC + E G + +A  +F+KM   D   W+ II  Y +N    E +  ++ M 
Sbjct: 57  NDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRME 116

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            EG+  D  T   + +ACGEL +L   + +HG +++    +D  + N  I MY K G + 
Sbjct: 117 CEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIE 176

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            AE+ F ++  R   SW +M+S Y   G    +L  F +ML +  + +   +I+ LG+C+
Sbjct: 177 LAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACS 236

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSW 367
               LR G  +HCQ+IR  +  E D +   +LI+ Y +CGK+   E+V + I  +NI++W
Sbjct: 237 IEHCLRSGMEIHCQVIRSEL--ELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAW 294

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI- 426
           N +I      GM ++            ++PD  ++ + L +C   G+L  G  IHG  I 
Sbjct: 295 NAMIG-----GMQEDD----------KVIPDVITMINLLPSCSQSGALLEGKSIHGFAIR 339

Query: 427 KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
           K+      ++++L+DMY KCG   LA  +F ++ +K++V WN+M+  + QN    EA+ +
Sbjct: 340 KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKM 399

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F  +    L+ D +T  + + A + +    +GK +H  ++  G+  + +I  A+  MYAK
Sbjct: 400 FQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAK 459

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CGDLQTA+  FD M  ++VVSW+ MI  Y +HG    +   F +M   G KPN  TF+++
Sbjct: 460 CGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSL 519

Query: 607 LWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACS SG ++EG  +FN+M++ +G++P ++HY CM+DLL R+G+++ A   I  MP   
Sbjct: 520 LTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVP 579

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
              IWG+LL   R H  + + +   + +     ++ G Y LLSN+YAE G W++  +++ 
Sbjct: 580 TARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKY 639

Query: 726 IMEVTGLKKVPGYSTI 741
           +M+  GL K  G S +
Sbjct: 640 LMKEQGLVKTVGCSMV 655



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 173/530 (32%), Positives = 285/530 (53%), Gaps = 18/530 (3%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           TR +  + E G + ++  +F+     D+F+W V+I+ Y  N  F+E+I  Y++M  E   
Sbjct: 62  TRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIR 121

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
             NF +P V++AC  L  L  G+KVHG++IK GFD D  +   ++  Y + G ++ A KV
Sbjct: 122 SDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKV 181

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD+M  RD+VSW+S+++ Y  + D    L  F  M+R G + D   M+S   AC     L
Sbjct: 182 FDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCL 241

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           R    IH  V+R ++++D  +  S I MY KCG +  AER F +I  +   +W AMI   
Sbjct: 242 RSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI--- 298

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
              G  Q+         + K  P++IT+I +L SC+  G L EGKS+H   IRK   P Y
Sbjct: 299 ---GGMQE---------DDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLP-Y 345

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             L  AL++ Y +CG++   E V + + E+N++SWN +++ Y +    KEAL++   +  
Sbjct: 346 LVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN 405

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNL 451
             L PD+ ++AS L A   + S   G QIH +++K+    + F+ ++++ MY+KCG    
Sbjct: 406 EPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQT 465

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A   F+ +  K VV WN+MI  +  +G    +I  F +M     + +  TF++ + ACS 
Sbjct: 466 AREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSI 525

Query: 512 IGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            G +++G  + +   + YG+   I     + D+  + G+L  A+   + M
Sbjct: 526 SGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEM 575



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 214/419 (51%), Gaps = 19/419 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L  L    ++H  L+  G   D      LI+ Y ++G +  +  VFD     D
Sbjct: 130 VIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRD 189

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  Y  +     S++ + +M+R       F   S L ACS    L SG ++H 
Sbjct: 190 LVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHC 249

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           ++I+   + D ++QTS++  YG+ G +D A +VF+++ S+++V+W+++I    ++     
Sbjct: 250 QVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED----- 304

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
                     + V PD +TM++L  +C +  +L   +SIHG  +R+       L  + + 
Sbjct: 305 ----------DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVD 354

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG+L  AE  F ++ ++   SW  M++ Y ++  +++AL+ F  +L    +P+ IT
Sbjct: 355 MYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAIT 414

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +VL + A L    EGK +H  I++ G+G    ++  A++  YA+CG +    +    +
Sbjct: 415 IASVLPAVAELASRSEGKQIHSYIMKLGLGSN-TFISNAIVYMYAKCGDLQTAREFFDGM 473

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             ++++SWN +I  YA  G  + +++   +M+  G  P+  +  S L+AC   G +  G
Sbjct: 474 VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 218/730 (29%), Positives = 385/730 (52%), Gaps = 8/730 (1%)

Query: 15   RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
            ++H  ++ TG+  D    T L+  Y  +G + +++ +F+   + +   W  L+  Y  + 
Sbjct: 867  QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926

Query: 75   FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
               E + +Y +M +E  + +   + +V  +C  L D   G +V G II+ GF+    +  
Sbjct: 927  NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 986

Query: 135  SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            S++  +  F  +++A  VFD M   D++SW+++I++Y  +    E L+ FH M     E 
Sbjct: 987  SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 1046

Query: 195  DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
            +  T+ SL   C  + +L+  R IHG V++  +  +  + N+ + +YS+ G    AE  F
Sbjct: 1047 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 1106

Query: 255  VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
              + +R   SW +M++CY + G     L+   ++L++ +  N +T  + L +C+    L 
Sbjct: 1107 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 1166

Query: 315  EGKSVHCQIIRKGMGPEYDYL--GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
            E K VH  II  G    +D+L  G AL+  Y + G M E +KV+  + + + ++WN LI 
Sbjct: 1167 ESKIVHALIIVAGF---HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIG 1223

Query: 373  EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHGHVIKIDCK 431
             +A      EA++    ++  G+  +  ++ S L AC     L + G+ IH H++    +
Sbjct: 1224 GHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFE 1283

Query: 432  -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
             D++V++SLI MY+KCG  N +  +F+ +  KS + WN+M+     +G   EA+ +F +M
Sbjct: 1284 SDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 1343

Query: 491  YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
                + +D+ +F   + A +N+  LE+G+ +H  +I  G   D+++  A  DMY KCG++
Sbjct: 1344 RNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEM 1403

Query: 551  QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
                ++      R+ +SW+ +I  +  HG    A   F +ML  G KP+ VTF+++L AC
Sbjct: 1404 HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 1463

Query: 611  SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
            +H G V+EG  Y+++M R FGV P ++H  C++DLL RSG +  A   I  MP P N   
Sbjct: 1464 NHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA 1523

Query: 670  WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
            W +LL  CRIH  +++ +   + L     +D+  Y L SN+ A  G W++   +R  M  
Sbjct: 1524 WRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGS 1583

Query: 730  TGLKKVPGYS 739
              +KK P  S
Sbjct: 1584 NNIKKQPACS 1593



 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 186/577 (32%), Positives = 309/577 (53%), Gaps = 7/577 (1%)

Query: 166 SIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           S I S  +   ++E LK+  S     ++P     L + + C +  + +    IH H++  
Sbjct: 3   SKIQSACNLGRLAEALKLLSSNPTR-LDPSLY--LKILQLCIDKKAKKQGHLIHTHLITN 59

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
               D  L    I+ Y K GD+++A   F  + +R   SWTAM+S Y+++G F+KA   F
Sbjct: 60  GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
             M     + N  T  + L +C  L  L  G  V    I+KG   E  ++  AL++F+++
Sbjct: 120 SDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ-GCIQKGRFVENLFVKSALVDFHSK 178

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           CGKM +   +   + ER+++SWN +I  YA +G + ++  +   M   GL+PD +++ S 
Sbjct: 179 CGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSV 238

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           L A    G L +  QIHG + ++     + V   LI+ Y+K G    A  L + + +K +
Sbjct: 239 LRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDL 298

Query: 465 VMWNSMICGFYQNG-NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
               ++I G+   G  S++A++LF +M    + MD+V   + +  C+N+     G  +H 
Sbjct: 299 FSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHA 358

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             + Y    D+ +  AL DMYAK G+++ A+R FD M E+NV+SW+++I  Y  HG  + 
Sbjct: 359 FALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHM 418

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMV 642
           A SL+K+M   G KPN+VTF+++L+ACSH+G   EG   FN M   + ++P  +HY+CMV
Sbjct: 419 AVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMV 478

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           DL +R G +E A+ ++  +    N S+WGA+L    I+  + + K     L      ++ 
Sbjct: 479 DLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSV 538

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            Y +L++IY+  G WD+  K+R +ME    KK  GYS
Sbjct: 539 NYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYS 575



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 183/682 (26%), Positives = 339/682 (49%), Gaps = 9/682 (1%)

Query: 4    FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            F   T+      LHA  +V  ++     +  LI  Y++ G++  +R VFD  +  +   W
Sbjct: 754  FSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASW 813

Query: 64   AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-GEKVHGRII 122
            + ++  Y+    +EE++ L+ +M       + F+  S++ ACS  G +   G +VHG ++
Sbjct: 814  STMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVV 873

Query: 123  KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
            K G   D  + T+++  YG  G + +A+K+F++M   +VVSW+S++  Y D+ +  E L 
Sbjct: 874  KTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLN 933

Query: 183  MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
            ++  M +EGV  +  T  ++  +CG L        + GH+++   +    + NS I M+S
Sbjct: 934  VYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFS 993

Query: 243  KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
                +  A   F  + +    SW AMIS Y   G  +++L  F  M  +  E N  TL +
Sbjct: 994  SFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSS 1053

Query: 303  VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
            +L  C+ +  L+ G+ +H  +++ G+      +   L+  Y+E G+  + E V  A+ ER
Sbjct: 1054 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNV-CICNTLLTLYSEAGRSEDAELVFQAMTER 1112

Query: 363  NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
            +++SWN +++ Y + G   + L++L ++   G + +  + AS+L+AC N   L     +H
Sbjct: 1113 DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH 1172

Query: 423  GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
              +I     D   V ++L+ MY K G    A  + + + Q   V WN++I G  +N    
Sbjct: 1173 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPN 1232

Query: 482  EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTAL 540
            EA+  +  +    +  + +T ++ + ACS    L K G  +H  ++  G   D Y+  +L
Sbjct: 1233 EAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSL 1292

Query: 541  TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
              MYAKCGDL ++  +FD +  ++ ++W+AM+     HG   +A  +F +M + G+  ++
Sbjct: 1293 ITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQ 1352

Query: 601  VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
             +F   L A ++   +EEG+     +   G E DL      +D+  + G++    KM   
Sbjct: 1353 FSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM--- 1409

Query: 661  MPFPANGS--IWGALLNGCRIH 680
            +P P N S   W  L++    H
Sbjct: 1410 LPQPINRSRLSWNILISAFARH 1431



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 232/461 (50%), Gaps = 7/461 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H HL+  G   D   +T+LI  Y ++G + ++R VFD   E     W  ++  Y  N  
Sbjct: 52  IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 111

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           FE++ +L+  M       + F Y S LRAC+SL  L  G +V G I K  F ++  ++++
Sbjct: 112 FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSA 171

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  + + G ++DA  +F  M  RDVVSW+++I  Y       +   MF SM+R G+ PD
Sbjct: 172 LVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPD 231

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ S+  A  E   L  A  IHG + +        +    I  Y+K G L SA+    
Sbjct: 232 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 291

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQ-KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            + K+   S TA+I+ Y   G +   AL+ F +M ++    + + L ++L  CA L    
Sbjct: 292 GMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFA 351

Query: 315 EGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            G  +H   ++    P YD  +G ALI+ YA+ G++ + ++    + E+N++SW  LIS 
Sbjct: 352 LGTQIHAFALK--YQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISG 409

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI-KIDCKD 432
           YA+ G    A+ L  +M++ G  P+  +  S L AC + G    G +   +++ K + K 
Sbjct: 410 YAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKP 469

Query: 433 EFVQ-SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI 471
                S ++D++++ G    AY L  +I  K +  +W +++
Sbjct: 470 RAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAIL 510



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 248/509 (48%), Gaps = 9/509 (1%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           +Y  +L+ C        G  +H  +I  GF  D  + T ++  Y + G +  AR VFD M
Sbjct: 32  LYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGM 91

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R VVSW+++++ Y  N    +   +F  M   GV+ +  T  S   AC  L  L    
Sbjct: 92  PERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGI 151

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            + G + + +   +  + ++ +  +SKCG +  A   F  + +R   SW AMI  Y   G
Sbjct: 152 QVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQG 211

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           +   +   F  ML     P+  TL +VL + A  G L     +H  I + G G  YD + 
Sbjct: 212 FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG-SYDIVT 270

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM-SKEALELLVQMQTWGL 395
             LI  YA+ G +   + +   + ++++ S   LI+ YA +G+ S +AL+L  +M    +
Sbjct: 271 GLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNI 330

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYL 454
             D   + S L+ C N+ S  LG QIH   +K     D  + ++LIDMY+K G    A  
Sbjct: 331 GMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKR 390

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
            F+ +++K+V+ W S+I G+ ++G    A++L+ +M     + ++VTFL+ + ACS+ G 
Sbjct: 391 AFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGL 450

Query: 515 LEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
             +G    + +++ Y ++      + + D++A+ G L+ A  +   +  + N   W A++
Sbjct: 451 TAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAIL 510

Query: 573 DCYGMHGQLN----DAASLFKQMLDSGIK 597
               ++G ++     A++LF    ++ + 
Sbjct: 511 GASSIYGYMSLGKEAASNLFNMQPENSVN 539



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 211/413 (51%), Gaps = 4/413 (0%)

Query: 9    NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
            NL+    +H  ++  GL  +      L+  Y+E G    + LVF    E D   W  ++ 
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 1122

Query: 69   CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            CY+ +    + + +  ++++    +++  + S L ACS+   L   + VH  II  GF  
Sbjct: 1123 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHD 1182

Query: 129  DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
              ++  +++  YG+ G + +A+KV   M   D V+W+++I  + +N + +E +K +  + 
Sbjct: 1183 FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIR 1242

Query: 189  REGVEPDFVTMLSLAEACGELCS-LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             +G+  +++TM+S+  AC      L+    IH H++    + D  + NS I MY+KCGDL
Sbjct: 1243 EKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDL 1302

Query: 248  LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             S+   F  +  +   +W AM++     G  ++AL+ F +M  V    +  +    L + 
Sbjct: 1303 NSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAAT 1362

Query: 308  AGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
            A L  L EG+ +H  +I+  +G E D ++  A ++ Y +CG+M +  K++     R+ LS
Sbjct: 1363 ANLAVLEEGQQLHGLVIK--LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS 1420

Query: 367  WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            WN+LIS +AR G  ++A E   +M   G  PD  +  S LSAC + G +  GL
Sbjct: 1421 WNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 1473



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 147/640 (22%), Positives = 267/640 (41%), Gaps = 62/640 (9%)

Query: 7   CTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C NL      T++HA  L     YD      LI+ YA+ G +  ++  FD  +E +   W
Sbjct: 344 CANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISW 403

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG-EKVHGRII 122
             LI  Y  + +   ++ LY KM  +    ++  + S+L ACS  G    G E  +  + 
Sbjct: 404 TSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVN 463

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYFDNADVSEGL 181
           K          + ++  +   G L++A  +  K+  +   S W +I+ +      +S G 
Sbjct: 464 KYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGK 523

Query: 182 KMFHSMVREGVEP--DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           +   ++     E   ++V + S+  A G       A  I   +  R  K +   G SF  
Sbjct: 524 EAASNLFNMQPENSVNYVVLASIYSAAG---LWDDAWKIRKLMEERSTKKNA--GYSFFQ 578

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV------------- 286
              K   LL  +    + +          +S  NR+   +   ++FV             
Sbjct: 579 ATKKSIPLLQVQHGVSRRDFNILDFGAIFLS--NRTPQEECFPDTFVLEPSFLPPSAVWK 636

Query: 287 --KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP------EYDYLGPA 338
                 V+   NL   +  +GS  G+  + + K+V     +K   P          +   
Sbjct: 637 SSDHRSVQLNGNLTVSVDEVGSALGMRQVEKPKTVGSHTGQKQWAPVSTITTASALINET 696

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP- 397
            +E +AE  K  +  K  +A   R    W  L  + A+  + ++  +  ++       P 
Sbjct: 697 PVENFAEQVKDDDL-KTSNAGSRR----WGCLDGDIAKVFLQQQHTDYGIRCLNAVNFPL 751

Query: 398 DSFS------VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
             FS         +L A   VGS+ LG+              F  ++LI+MYSK G    
Sbjct: 752 KGFSEITSQMAGKALHAFCIVGSVNLGI--------------FQTNTLINMYSKFGNIEH 797

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F+ ++ ++   W++M+ G+ + G   EA+ LF QM+   +E +     + I ACS 
Sbjct: 798 ARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSR 857

Query: 512 IGQL-EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            G + ++G  VH  ++  G+  D+Y+ TAL   Y   G +  AQ++F+ M + NVVSW++
Sbjct: 858 SGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTS 917

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           ++  Y   G   +  +++++M   G+  N+ TF  +  +C
Sbjct: 918 LMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 957



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 4/181 (2%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           ++ V F   ++  S I     GK +H   I   V   I+    L +MY+K G+++ A+ V
Sbjct: 744 LNAVNF--PLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYV 801

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           FD M  RN  SWS M+  Y   G   +A  LF QM   G++PN     +++ ACS SG +
Sbjct: 802 FDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 861

Query: 617 EEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
            +  F  +   +  G+  D+     +V      G +  A K+   MP   N   W +L+ 
Sbjct: 862 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMV 920

Query: 676 G 676
           G
Sbjct: 921 G 921


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 220/644 (34%), Positives = 361/644 (56%), Gaps = 25/644 (3%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           S  ++H ++ K G   D    T +   Y +   L  ARKVFD+    +V  W+S + SY 
Sbjct: 19  SVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYC 78

Query: 173 DNADVSEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKID 230
                 E L++FH M+   G  PD  T+    +AC  L  L   + IHG   +  +I  D
Sbjct: 79  REKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSD 138

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             +G++ + +YSKCG +  A + F + ++  T  WT+M++ Y ++   ++AL  F +M+ 
Sbjct: 139 MFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVM 198

Query: 291 ---VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP---ALIEFYA 344
              V  +P  +TL++V+ +CA L  ++ G  VH  +IR+    E+D   P   +L+  YA
Sbjct: 199 MDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRR----EFDGDLPLVNSLLNLYA 252

Query: 345 ECGKMSECEKV----IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
           + G    CEK+       + E++++SW+ +I+ YA    + EAL L  +M      P+S 
Sbjct: 253 KTG----CEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSV 308

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI 459
           +V S+L AC    +L+ G +IH   +    + +F V ++LIDMY KC   + A  LF+R+
Sbjct: 309 TVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRL 368

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
            +K VV W +++ G+ QNG + +++ +F  M  + ++ D V  +  + A S +G  ++  
Sbjct: 369 PKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQAL 428

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
            +H  ++  G   ++++  +L ++Y+KCG L  A ++F  M  R+VV WS+MI  YG+HG
Sbjct: 429 CLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHG 488

Query: 580 QLNDAASLFKQML-DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQH 637
           +  +A  +F QM+ +S ++PN VTF++IL ACSH+G VEEG   F+ M   + + PD +H
Sbjct: 489 RGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEH 548

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           +  MVDLL R G +  A  +I+ MP PA   +WGALL  CRIH  I++ +   K L    
Sbjct: 549 FGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLD 608

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +  GYY LLSNIYA +G WD   ++R+ ++  GLKK+ G S +
Sbjct: 609 PSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMV 652



 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 165/427 (38%), Positives = 238/427 (55%), Gaps = 3/427 (0%)

Query: 317  KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
            K  H +I   G+  +   L    I  Y    ++     V   I       WN++I  +A 
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAI-MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795

Query: 377  KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFV 435
             G    +LEL  +M   GL PD F+   +L +C  +  LQ G  IH H++   C  D FV
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855

Query: 436  QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
             ++L+DMY+KCG    A L+F+++  + +V W SMI G+  NG + E +  F  M  + +
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 496  EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
              + V+ L+ + AC N+G L KG+W H  +I  G   DI + TA+ DMY+KCG L  A+ 
Sbjct: 916  IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 556  VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
            +FD  + +++V WSAMI  YG+HG    A  LF QM+ +G++P+ VTF  +L ACSHSG 
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 616  VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            +EEGK YF  M   F +   L +YACMVDLL R+G +  A  +I +MP   + SIWG+LL
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095

Query: 675  NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
              CRIH  +D+ + I   L        GY+ LLSNIYA +  W+E  KVR +M   G  K
Sbjct: 1096 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 1155

Query: 735  VPGYSTI 741
            + G+S +
Sbjct: 1156 IQGFSLV 1162



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 182/565 (32%), Positives = 311/565 (55%), Gaps = 9/565 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF++C N R +++LH+ +  TG+ +D   +T+L   YA+  SL+++R VFD    P+  +
Sbjct: 10  LFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL 69

Query: 63  WAVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W   ++ Y     +EE++ L+H MI        NF  P  L+AC+ L  L  G+ +HG  
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 122 IKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            K      D  + ++++  Y + G + +A KVF++    D V W+S++  Y  N D  E 
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189

Query: 181 LKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           L +F  MV  + V  D VT++S+  AC +L +++    +HG V+RR+   D PL NS + 
Sbjct: 190 LALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLN 249

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y+K G    A   F K+ ++   SW+ MI+CY  +    +AL  F +M+E + EPN +T
Sbjct: 250 LYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVT 309

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHA 358
           +++ L +CA    L EGK +H   + KG   E D+ +  ALI+ Y +C    E   +   
Sbjct: 310 VVSALQACAVSRNLEEGKKIHKIAVWKGF--ELDFSVSTALIDMYMKCSCPDEAVDLFQR 367

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + +++++SW  L+S YA+ GM+ +++ +   M + G+ PD+ +V   L+A   +G  Q  
Sbjct: 368 LPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQA 427

Query: 419 LQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           L +HG+V++       FV +SLI++YSKCG    A  LF+ +  + VV+W+SMI  +  +
Sbjct: 428 LCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIH 487

Query: 478 GNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIY 535
           G   EA+ +F QM  N  +  + VTFL+ + ACS+ G +E+G  +  +++  Y +R D  
Sbjct: 488 GRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSE 547

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSM 560
               + D+  + G L  A  + + M
Sbjct: 548 HFGIMVDLLGRIGQLGKAMDIINRM 572



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 242/488 (49%), Gaps = 7/488 (1%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
            ++ L +AC    + R    +H  V +  I  D         +Y+KC  L +A + F + 
Sbjct: 6   VLVDLFQACN---NGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREG 316
                  W + +  Y R   +++ L  F  M+    E P+  T+   L +CAGL  L  G
Sbjct: 63  PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K +H    +        ++G AL+E Y++CG+M E  KV       + + W  +++ Y +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182

Query: 377 KGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF- 434
               +EAL L  QM     ++ D  ++ S +SAC  + +++ G  +HG VI+ +   +  
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + +SL+++Y+K G + +A  LF ++ +K V+ W++MI  +  N  + EA+NLFH+M    
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 302

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
            E + VT ++A+QAC+    LE+GK +H   +  G   D  + TAL DMY KC     A 
Sbjct: 303 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAV 362

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F  + +++VVSW A++  Y  +G    +  +F+ ML  GI+P+ V  + IL A S  G
Sbjct: 363 DLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 422

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
             ++       +   G   ++   A +++L S+ G +  A K+   M    +  IW +++
Sbjct: 423 IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMI 481

Query: 675 NGCRIHKR 682
               IH R
Sbjct: 482 AAYGIHGR 489



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 204/417 (48%), Gaps = 34/417 (8%)

Query: 13   LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
            L + HA +   GL YD    T+    Y     + ++ +VF+    P SF+W V+I+ +  
Sbjct: 736  LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795

Query: 73   NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
            +  F  S+ LY KM+ +      F +P  L++C+ L DL  G+ +H  ++ CG   D  +
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855

Query: 133  QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              +++  Y + G ++ AR VFDKM  RD+VSW+S+I+ Y  N   SE L  F  M   GV
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 193  EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
             P+ V++LS+  ACG L +LR     H +V++   + D  +  + + MYSKCG L  A  
Sbjct: 916  IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 253  TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
             F +   +    W+AMI+ Y   G  +KA++ F +M++    P+ +T   VL +C+  G 
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 313  LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
            L EGK ++ Q++ +              EF                +  R + ++  ++ 
Sbjct: 1036 LEEGK-MYFQLMTE--------------EF----------------VIARKLSNYACMVD 1064

Query: 373  EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
               R G   EA++L+  M    + PD+    S L AC    +L L  +I  H+  +D
Sbjct: 1065 LLGRAGQLSEAVDLIENMP---VEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLD 1118



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 5/207 (2%)

Query: 4    FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
             +SC  L  L R   +H HL+  G   D      L++ YA+ G + ++RLVFD     D 
Sbjct: 825  LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884

Query: 61   FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N +  E+ L +  ++R    I N +   SVL AC +LG L  GE  H 
Sbjct: 885  VSWTSMISGYAHNGYNSET-LGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHS 943

Query: 120  RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +I+ GF+ D ++ T+I+  Y + G LD AR +FD+   +D+V WS++IASY  +    +
Sbjct: 944  YVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 1003

Query: 180  GLKMFHSMVREGVEPDFVTMLSLAEAC 206
             + +F  MV+ GV P  VT   +  AC
Sbjct: 1004 AIDLFDQMVKAGVRPSHVTFTCVLSAC 1030



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 21/200 (10%)

Query: 1    MPLFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
            + +  +C NL   RK    H++++ TG  +D   +T +++ Y++ GSL  +R +FD    
Sbjct: 923  LSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAG 982

Query: 58   PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             D   W+ +I  Y  +    ++I L+ +M++     S+  +  VL ACS  G L  G K+
Sbjct: 983  KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEG-KM 1041

Query: 118  HGRIIKCGFDKDDVIQTSILCTY-------GEFGCLDDARKVFDKM-TSRDVVSWSSIIA 169
            + +++      ++ +    L  Y       G  G L +A  + + M    D   W S++ 
Sbjct: 1042 YFQLM-----TEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096

Query: 170  S--YFDNADVSEGLK--MFH 185
            +    +N D++E +   +FH
Sbjct: 1097 ACRIHNNLDLAEKIADHLFH 1116


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 221/703 (31%), Positives = 379/703 (53%), Gaps = 20/703 (2%)

Query: 50  LVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
           L F TF  P+     ++ +  + N    ++I     M+ + +      Y   L+ C    
Sbjct: 23  LQFPTFTNPNPLTGRLIQE--INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTR 80

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSII 168
               G  VH ++ +     D V   S++  Y + G  + A  +F  M +SRD++SWS+++
Sbjct: 81  SFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMV 140

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-I 227
           + + +N      L  F  M+  G  P+     +   AC     +    SI G V++   +
Sbjct: 141 SCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYL 200

Query: 228 KIDGPLGNSFIVMYSKC-GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           + D  +G   I M+ K  GDL+SA + F K+ +R   +WT MI+   + G+  +A++ F+
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFL 260

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
            M+    EP+  TL  V+ +CA +  L  G+ +H Q IR G+  +   +G  LI  YA+C
Sbjct: 261 DMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD-RCVGCCLINMYAKC 319

Query: 347 ---GKMSECEKVIHAIGERNILSWNMLISEYARKG-MSKEALELLVQMQTWGLMPDSFSV 402
              G M    K+   I + N+ SW  +I+ Y +KG   +EAL+L   M    ++P+ F+ 
Sbjct: 320 SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTF 379

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIK-----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           +S+L AC N+ +L++G Q+  H +K     ++C    V +SLI MY++ G  + A   F+
Sbjct: 380 SSTLKACANLAALRIGEQVFTHAVKLGFSSVNC----VANSLISMYARSGRIDDARKAFD 435

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            + +K+++ +N++I  + +N NS EA+ LF+++    +     TF + +   ++IG + K
Sbjct: 436 ILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK 495

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H ++I  G++ +  +  AL  MY++CG++++A +VF+ M +RNV+SW+++I  +  
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQ 636
           HG    A  LF +ML+ G++PNEVT++ +L ACSH G V EG  +F +M    GV P ++
Sbjct: 556 HGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRME 615

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYAC+VD+L RSG +  A + I+SMP+ A+  +W   L  CR+H  +++ K   K +   
Sbjct: 616 HYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQ 675

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +D   Y LLSN+YA    WDE   +R  M+   L K  G S
Sbjct: 676 EPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCS 718



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 215/415 (51%), Gaps = 15/415 (3%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEM---GSLRSSRLVFDTFKEPD 59
           +C N+  L    +LH+  +  GL  D      LI  YA+    GS+ ++R +FD   + +
Sbjct: 280 ACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHN 339

Query: 60  SFMWAVLIKCYMWNNFF-EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
            F W  +I  Y+    + EE++ L+  MI      ++F + S L+AC++L  L  GE+V 
Sbjct: 340 VFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +K GF   + +  S++  Y   G +DDARK FD +  ++++S++++I +Y  N +  
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L++F+ +  +G+     T  SL      + ++     IH  V++  +K++  + N+ I
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYS+CG++ SA + F  +E R   SWT++I+ + + G+  +ALE F KMLE    PN +
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEV 579

Query: 299 TLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           T I VL +C+ +G + EG K         G+ P  ++    +++     G +SE  + I+
Sbjct: 580 TYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYA-CIVDILGRSGSLSEAIQFIN 638

Query: 358 AIGER-NILSWNMLISEYARKG---MSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           ++  + + L W   +      G   + K A +++++ +     P ++ + S+L A
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHD--PAAYILLSNLYA 691



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 242/528 (45%), Gaps = 38/528 (7%)

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G L S+  VF+   E ++  W ++I   M   +  E+I L+  MI        F    V+
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF---GCLDDARKVFDKMTSR 159
            AC+++  L  G+++H + I+ G   D  +   ++  Y +    G +  ARK+FD++   
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338

Query: 160 DVVSWSSIIASYFDNADV-SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           +V SW+++I  Y        E L +F  M+   V P+  T  S  +AC  L +LR    +
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
             H ++        + NS I MY++ G +  A + F  + ++   S+  +I  Y ++   
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++ALE F ++ +     +  T  ++L   A +G + +G+ +H ++I+ G+         A
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN-A 517

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI  Y+ CG +    +V   + +RN++SW  +I+ +A+ G + +ALEL  +M   G+ P+
Sbjct: 518 LISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPN 577

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
             +  + LSAC +VG +  G +                     MY++ G       +  R
Sbjct: 578 EVTYIAVLSACSHVGLVNEGWK-----------------HFKSMYTEHG-------VIPR 613

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           ++  + ++    I G  ++G+  EAI   + M     + D + + T + AC   G LE G
Sbjct: 614 MEHYACIV---DILG--RSGSLSEAIQFINSM---PYKADALVWRTFLGACRVHGNLELG 665

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
           K    K+I      D      L+++YA          +  +M E+ ++
Sbjct: 666 KHA-AKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLI 712


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 232/736 (31%), Positives = 379/736 (51%), Gaps = 15/736 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSS--RLVFDTFKEPDSFMWAVLIKCYMWN 73
           +H   + +G+  D      LI  YA+ G + SS    +F+  +  D   W  +++  ++N
Sbjct: 220 IHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYN 279

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
              E+S+  + +M   +    +      + ACSSLG+L  GE +HG+ IK G+  +  + 
Sbjct: 280 GDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVS 339

Query: 134 --TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
              S++  Y +   +D A  VF +M  +D+VSW++++  Y  N ++ E   +   M   G
Sbjct: 340 VANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTG 399

Query: 192 -VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVMYSKCGDLLS 249
             +PD VT+ ++   C EL   R  R+IHG+ +RR +  D  PL N  I MYSKC  +  
Sbjct: 400 CFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEK 459

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           AE  F    +    SW AMIS Y+++ +++KA   F ++L   +  +  T+  +L SC  
Sbjct: 460 AELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNS 519

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWN 368
              L  GKSVH   ++ G    +  L  +L++ Y   G ++    ++       +I SWN
Sbjct: 520 ANSLNFGKSVHIWQLKSGF-LNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWN 578

Query: 369 MLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
            +I    R    +EALE  + M Q      DS ++ + LSA  N+  L  G  +H   +K
Sbjct: 579 TIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALK 638

Query: 428 IDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D  VQ+SLI MY +C   N A  +F+     ++  WN MI     N  S EA+ L
Sbjct: 639 SPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALEL 698

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F  +     + +E T ++ + AC+ IG L  GK VH     YG +++ +I  AL D+Y+ 
Sbjct: 699 FRHLQF---KPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYST 755

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG L  A +VF   S+++  +W++MI  YG HG    A  LF +M D GIK  + TF+++
Sbjct: 756 CGRLDNAVKVFRH-SQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSL 814

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSHSG V +G  Y+  M   +G++P+ +H   +V++L+RSG I+ A++    +   A
Sbjct: 815 LSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNA 874

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           +  +WG LL+ C  H  +++ K + ++L      + GYY  L+N+Y   G+W +   +R 
Sbjct: 875 SSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLRQ 934

Query: 726 IMEVTGLKKVPGYSTI 741
            +   GL+K  GYS I
Sbjct: 935 YIHDQGLRKCAGYSLI 950



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 185/675 (27%), Positives = 320/675 (47%), Gaps = 15/675 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           N+   T +H   L TG     P ST L   Y++ G   SSR++F+     D   W  +I 
Sbjct: 112 NIFTATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIIS 171

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             + N  +  ++  + KMI++Q    +     V+   S L + G G  +H   IK G   
Sbjct: 172 ASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLV 231

Query: 129 DDVIQTSILCTYGEFGCLD--DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D  +  +++  Y + G ++  D+  +F++M  +DVVSW+SI+     N D+ + L  F  
Sbjct: 232 DISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRR 291

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG--PLGNSFIVMYSKC 244
           M       D V++     AC  L  L     IHG  ++   K +    + NS I +YS+C
Sbjct: 292 MNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQC 351

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-EEPNLITLITV 303
             +  AE  F ++  +   SW AM+  Y  +    +A +  V+M      +P+++TL T+
Sbjct: 352 EAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTM 411

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L  CA L   REG+++H   IR+ M P++  L   LI+ Y++C  + + E + H+  + +
Sbjct: 412 LPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQID 471

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SWN +IS Y++    ++A  L  ++   G    S +V + LS+C +  SL  G  +H 
Sbjct: 472 LVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHI 531

Query: 424 HVIKID-CKDEFVQSSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMICGFYQNGNSL 481
             +K        + +SL+ MY   G     + +L E      +  WN++I G  +     
Sbjct: 532 WQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQ 591

Query: 482 EAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           EA+  F  M        D +T +  + A +NI  L +GK +H   +      D  +  +L
Sbjct: 592 EALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSL 651

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
             MY +C D+ +A++VF   S  N+ +W+ MI     + +  +A  LF+ +     KPNE
Sbjct: 652 ITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHL---QFKPNE 708

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI-H 659
            T +++L AC+  G +  GK        +G + +    A +VDL S  G ++ A K+  H
Sbjct: 709 FTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRH 768

Query: 660 SMPFPANGSIWGALL 674
           S     + S W +++
Sbjct: 769 SQK---SESAWNSMI 780


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 218/730 (29%), Positives = 385/730 (52%), Gaps = 8/730 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ TG+  D    T L+  Y  +G + +++ +F+   + +   W  L+  Y  + 
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E + +Y +M +E  + +   + +V  +C  L D   G +V G II+ GF+    +  
Sbjct: 277 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 336

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  +  F  +++A  VFD M   D++SW+++I++Y  +    E L+ FH M     E 
Sbjct: 337 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 396

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T+ SL   C  + +L+  R IHG V++  +  +  + N+ + +YS+ G    AE  F
Sbjct: 397 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 456

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             + +R   SW +M++CY + G     L+   ++L++ +  N +T  + L +C+    L 
Sbjct: 457 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 516

Query: 315 EGKSVHCQIIRKGMGPEYDYL--GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           E K VH  II  G    +D+L  G AL+  Y + G M E +KV+  + + + ++WN LI 
Sbjct: 517 ESKIVHALIIVAGF---HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIG 573

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHGHVIKIDCK 431
            +A      EA++    ++  G+  +  ++ S L AC     L + G+ IH H++    +
Sbjct: 574 GHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFE 633

Query: 432 -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            D++V++SLI MY+KCG  N +  +F+ +  KS + WN+M+     +G   EA+ +F +M
Sbjct: 634 SDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 693

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               + +D+ +F   + A +N+  LE+G+ +H  +I  G   D+++  A  DMY KCG++
Sbjct: 694 RNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEM 753

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
               ++      R+ +SW+ +I  +  HG    A   F +ML  G KP+ VTF+++L AC
Sbjct: 754 HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 813

Query: 611 SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           +H G V+EG  Y+++M R FGV P ++H  C++DLL RSG +  A   I  MP P N   
Sbjct: 814 NHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA 873

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           W +LL  CRIH  +++ +   + L     +D+  Y L SN+ A  G W++   +R  M  
Sbjct: 874 WRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGS 933

Query: 730 TGLKKVPGYS 739
             +KK P  S
Sbjct: 934 NNIKKQPACS 943



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 181/670 (27%), Positives = 336/670 (50%), Gaps = 9/670 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  +V  ++     +  LI  Y++ G++  +R VFD  +  +   W+ ++  Y+    
Sbjct: 116 LHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGL 175

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-GEKVHGRIIKCGFDKDDVIQT 134
           +EE++ L+ +M       + F+  S++ ACS  G +   G +VHG ++K G   D  + T
Sbjct: 176 YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGT 235

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  YG  G + +A+K+F++M   +VVSW+S++  Y D+ +  E L ++  M +EGV  
Sbjct: 236 ALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG 295

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T  ++  +CG L        + GH+++   +    + NS I M+S    +  A   F
Sbjct: 296 NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 355

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             + +    SW AMIS Y   G  +++L  F  M  +  E N  TL ++L  C+ +  L+
Sbjct: 356 DHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 415

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+ +H  +++ G+      +   L+  Y+E G+  + E V  A+ ER+++SWN +++ Y
Sbjct: 416 WGRGIHGLVVKLGLDSNV-CICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 474

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            + G   + L++L ++   G + +  + AS+L+AC N   L     +H  +I     D  
Sbjct: 475 VQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 534

Query: 435 -VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++L+ MY K G    A  + + + Q   V WN++I G  +N    EA+  +  +   
Sbjct: 535 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 594

Query: 494 CLEMDEVTFLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            +  + +T ++ + ACS    L K G  +H  ++  G   D Y+  +L  MYAKCGDL +
Sbjct: 595 GIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNS 654

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           +  +FD +  ++ ++W+AM+     HG   +A  +F +M + G+  ++ +F   L A ++
Sbjct: 655 SNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATAN 714

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS--IW 670
              +EEG+     +   G E DL      +D+  + G++    KM   +P P N S   W
Sbjct: 715 LAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM---LPQPINRSRLSW 771

Query: 671 GALLNGCRIH 680
             L++    H
Sbjct: 772 NILISAFARH 781



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 243/471 (51%), Gaps = 4/471 (0%)

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           E+ S    +++H   +   + +     N+ I MYSK G++  A   F ++  R   SW+ 
Sbjct: 106 EITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWST 165

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR-EGKSVHCQIIRK 326
           M+S Y R G +++A+  F +M  +  EPN   + +++ +C+  G++  EG  VH  +++ 
Sbjct: 166 MLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT 225

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G+  +  Y+G AL+ FY   G +   +K+   + + N++SW  L+  Y+  G   E L +
Sbjct: 226 GILGDV-YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 284

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSK 445
             +M+  G+  +  + A+  S+CG +    LG Q+ GH+I+   +D   V +SLI M+S 
Sbjct: 285 YQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 344

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
                 A  +F+ + +  ++ WN+MI  +  +G   E++  FH M     E +  T  + 
Sbjct: 345 FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSL 404

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           +  CS++  L+ G+ +H  ++  G+  ++ I   L  +Y++ G  + A+ VF +M+ER++
Sbjct: 405 LSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDL 464

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW++M+ CY   G+  D   +  ++L  G   N VTF + L ACS+   + E K     
Sbjct: 465 ISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHAL 524

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           + + G    L     +V +  + G +  A K++ +MP P +   W AL+ G
Sbjct: 525 IIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQP-DRVTWNALIGG 574



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 211/413 (51%), Gaps = 4/413 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL+    +H  ++  GL  +      L+  Y+E G    + LVF    E D   W  ++ 
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 472

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
           CY+ +    + + +  ++++    +++  + S L ACS+   L   + VH  II  GF  
Sbjct: 473 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHD 532

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             ++  +++  YG+ G + +A+KV   M   D V+W+++I  + +N + +E +K +  + 
Sbjct: 533 FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIR 592

Query: 189 REGVEPDFVTMLSLAEACGELCS-LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            +G+  +++TM+S+  AC      L+    IH H++    + D  + NS I MY+KCGDL
Sbjct: 593 EKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDL 652

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            S+   F  +  +   +W AM++     G  ++AL+ F +M  V    +  +    L + 
Sbjct: 653 NSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAAT 712

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           A L  L EG+ +H  +I+  +G E D ++  A ++ Y +CG+M +  K++     R+ LS
Sbjct: 713 ANLAVLEEGQQLHGLVIK--LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS 770

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           WN+LIS +AR G  ++A E   +M   G  PD  +  S LSAC + G +  GL
Sbjct: 771 WNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 823



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 4/181 (2%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           ++ V F   ++  S I     GK +H   I   V   I+    L +MY+K G+++ A+ V
Sbjct: 94  LNAVNF--PLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYV 151

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           FD M  RN  SWS M+  Y   G   +A  LF QM   G++PN     +++ ACS SG +
Sbjct: 152 FDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 211

Query: 617 EEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
            +  F  +   +  G+  D+     +V      G +  A K+   MP   N   W +L+ 
Sbjct: 212 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMV 270

Query: 676 G 676
           G
Sbjct: 271 G 271


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 215/719 (29%), Positives = 373/719 (51%), Gaps = 6/719 (0%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D      +I + A MG L  +R +    +   +  W  +I  Y  +    E   LY  M 
Sbjct: 257 DQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMK 316

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           ++    +   + S+L A +++     G ++H   +K G D +  + +S++  Y + GC+ 
Sbjct: 317 KQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCIS 376

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA+KVFD  T +++V W++I+  +  N    E ++MF  M R  +E D  T +S+  AC 
Sbjct: 377 DAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACI 436

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            L SL   R +H   ++  +  D  + N+ + MYSK G +  A+  F  I  + + SW A
Sbjct: 437 NLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNA 496

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I     +    +A+    +M       + ++  T + +C+ +  +  GK +H   I+  
Sbjct: 497 LIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYN 556

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +   +  +G +LI+ Y++ G +    KV+  +   +I+  N LI+   +     EA+EL 
Sbjct: 557 VCSNH-AVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELF 615

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSK 445
            Q+   G  P +F+  S LS C    S  +G Q+H + +K  I  +D  +  SL+ +Y K
Sbjct: 616 QQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLK 675

Query: 446 CGFKNLAYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           C     A  L E +   K++V W + I G+ QNG S++++ +F +M    +  DE TF +
Sbjct: 676 CKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTS 735

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER- 563
            ++ACS +  L  GK +H  ++  G        +AL DMY+KCGD+ ++  +F  +  R 
Sbjct: 736 VLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQ 795

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           N++ W++MI  +  +G  N+A  LF++M +S IKP++VT + +L ACSH+G + EG  +F
Sbjct: 796 NIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFF 855

Query: 624 NAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           ++M +++G+ P + HYAC++DLL R G ++ A ++I  +PF A+G IW   L  C++HK 
Sbjct: 856 DSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKD 915

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +  K   K+L       +  Y  LS+++A  GNW E    R  M   G+ K PG S I
Sbjct: 916 EERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWI 974



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/589 (29%), Positives = 291/589 (49%), Gaps = 40/589 (6%)

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
           +T   F    VL ACS LG L  G +VH  ++K GF      Q  ++  Y + G +DDAR
Sbjct: 153 STPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDAR 212

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           ++FD +   D + W+S+IA Y       + L +F  M + G  PD VT +++      + 
Sbjct: 213 RMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMG 272

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            L  AR++    L+R                               I    T +W A+I+
Sbjct: 273 RLGDARTL----LKR-------------------------------IRMTSTVAWNAVIA 297

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y++SG   +    +  M +    P   T  ++L + A +    EG+ +H   ++ G+  
Sbjct: 298 SYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDA 357

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
              ++G +LI  Y + G +S+ +KV     E+NI+ WN ++  + +  + +E +++   M
Sbjct: 358 NV-FVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYM 416

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGF 448
           +   L  D F+  S L AC N+ SL LG Q+H   IK  +D  D FV ++++DMYSK G 
Sbjct: 417 RRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDA-DLFVANAMLDMYSKLGA 475

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            ++A  LF  I  K  V WN++I G   N    EAIN+  +M    + +DEV+F TAI A
Sbjct: 476 IDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINA 535

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           CSNI  +E GK +H   I Y V  +  + ++L D+Y+K GD++++++V   +   ++V  
Sbjct: 536 CSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPI 595

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMR 627
           +A+I     + + ++A  LF+Q+L  G KP+  TF +IL  C+   S   GK  +   ++
Sbjct: 596 NALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLK 655

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              +  D      +V +  +   +E A K++  +P   N   W A ++G
Sbjct: 656 SAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 173/625 (27%), Positives = 313/625 (50%), Gaps = 12/625 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA  +  GL  +    + LI  Y + G +  ++ VFD   E +  MW  ++  ++ N 
Sbjct: 345 QIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNE 404

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE+I ++  M R      +F + SVL AC +L  L  G +VH   IK G D D  +  
Sbjct: 405 LQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVAN 464

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++L  Y + G +D A+ +F  +  +D VSW+++I     N +  E + M   M   G+  
Sbjct: 465 AMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIAL 524

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D V+  +   AC  + ++   + IH   ++  +  +  +G+S I +YSK GD+ S+ +  
Sbjct: 525 DEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             ++        A+I+   ++    +A+E F ++L+   +P+  T  ++L  C       
Sbjct: 585 AHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSV 644

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISE 373
            GK VHC  ++  +  +   LG +L+  Y +C  + +  K++  + + +N++ W   IS 
Sbjct: 645 IGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKD 432
           YA+ G S ++L +  +M+++ +  D  +  S L AC  + +L  G +IHG ++K      
Sbjct: 705 YAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSY 764

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM-WNSMICGFYQNGNSLEAINLFHQMY 491
           E   S+L+DMYSKCG    ++ +F+ ++ +  +M WNSMI GF +NG + EA+ LF +M 
Sbjct: 765 ETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQ 824

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
            + ++ D+VT L  + ACS+ G + +G      +   YG+   +     L D+  + G L
Sbjct: 825 ESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHL 884

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT---FMNI 606
           Q AQ V D +  R + V W+  +    MH          K++++  ++P   +   F++ 
Sbjct: 885 QKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVE--MEPQSSSTYVFLSS 942

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGV 631
           L A   +G+  E K    AMR  GV
Sbjct: 943 LHAA--AGNWVEAKVAREAMREKGV 965



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 172/680 (25%), Positives = 321/680 (47%), Gaps = 42/680 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C+ L  L    ++H  +L +G          L++ YA+ G +  +R +FD    PD
Sbjct: 163 VLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPD 222

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I  Y             H++ R Q  ++ F                       
Sbjct: 223 TICWTSMIAGY-------------HRVGRYQQALALF----------------------S 247

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+ K G   D V   +I+ T    G L DAR +  ++     V+W+++IASY  +   SE
Sbjct: 248 RMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
              ++  M ++G+ P   T  S+  A   + +    R IH   ++  +  +  +G+S I 
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y K G +  A++ F    ++    W A++  + ++   ++ ++ F  M     E +  T
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFT 427

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++VLG+C  L  L  G+ VHC  I+ GM  +  ++  A+++ Y++ G +   + +   I
Sbjct: 428 FVSVLGACINLYSLDLGRQVHCITIKNGMDADL-FVANAMLDMYSKLGAIDVAKALFSLI 486

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             ++ +SWN LI   A      EA+ +L +M+ +G+  D  S A++++AC N+ +++ G 
Sbjct: 487 PVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGK 546

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH   IK + C +  V SSLID+YSK G    +  +   +   S+V  N++I G  QN 
Sbjct: 547 QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNN 606

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLISYGVRKDIYID 537
              EAI LF Q+  +  +    TF + +  C+       GK VH + L S  + +D  + 
Sbjct: 607 REDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLG 666

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +L  +Y KC  L+ A ++ + + + +N+V W+A I  Y  +G    +  +F +M    +
Sbjct: 667 ISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDV 726

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           + +E TF ++L ACS   ++ +GK     +   G        + ++D+ S+ GD+  +F+
Sbjct: 727 RSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFE 786

Query: 657 MIHSMPFPANGSIWGALLNG 676
           +   +    N   W +++ G
Sbjct: 787 IFKELKNRQNIMPWNSMIVG 806



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 255/508 (50%), Gaps = 44/508 (8%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G  PD   +  +  AC  L +L   R +H  VL+             + MY+KCG++  A
Sbjct: 152 GSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDA 211

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
            R F  I    T  WT+MI+ Y+R G +Q+AL  F +M ++   P+ +T +T++ + A +
Sbjct: 212 RRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASM 271

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G L + +++                                    +  I   + ++WN +
Sbjct: 272 GRLGDARTL------------------------------------LKRIRMTSTVAWNAV 295

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--I 428
           I+ Y++ G+  E   L   M+  GLMP   + AS LSA  N+ +   G QIH   +K  +
Sbjct: 296 IASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGL 355

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           D  + FV SSLI++Y K G  + A  +F+   +K++VMWN+++ GF QN    E I +F 
Sbjct: 356 DA-NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQ 414

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            M    LE D+ TF++ + AC N+  L+ G+ VH   I  G+  D+++  A+ DMY+K G
Sbjct: 415 YMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLG 474

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  A+ +F  +  ++ VSW+A+I     + +  +A ++ K+M   GI  +EV+F   + 
Sbjct: 475 AIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAIN 534

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI----HSMPFP 664
           ACS+  ++E GK   +A   + V  +    + ++DL S+ GD+E + K++     S   P
Sbjct: 535 ACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVP 594

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKE 692
            N  I G + N  R  + I++ + + K+
Sbjct: 595 INALITGLVQNN-REDEAIELFQQVLKD 621



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 229/482 (47%), Gaps = 58/482 (12%)

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
           A ACG L         H  +LR  + + G LG++ + +Y + G +  A R        C 
Sbjct: 69  ARACGVL---------HARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALA-----CC 114

Query: 263 TS-------WTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLR 314
           T         ++++SC+ RSG  +  L++F ++   +   P+   +  VL +C+ LG L 
Sbjct: 115 TGAPASSAAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALE 174

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+ VHC +++ G      +    L++ YA+CG++ +  ++   I   + + W  +I+ Y
Sbjct: 175 HGRQVHCDVLKSGFCSSV-FCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGY 233

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            R G  ++AL L  +M+  G +PD  +  + +S   ++G L                   
Sbjct: 234 HRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRL------------------- 274

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
                            A  L +RI+  S V WN++I  + Q+G   E   L+  M    
Sbjct: 275 ---------------GDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQG 319

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           L     TF + + A +N+   ++G+ +H   + +G+  ++++ ++L ++Y K G +  A+
Sbjct: 320 LMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAK 379

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           +VFD  +E+N+V W+A++  +  +    +   +F+ M  + ++ ++ TF+++L AC +  
Sbjct: 380 KVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLY 439

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           S++ G+         G++ DL     M+D+ S+ G I+ A  +   +P   + S W AL+
Sbjct: 440 SLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVS-WNALI 498

Query: 675 NG 676
            G
Sbjct: 499 VG 500



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 8/230 (3%)

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D+      + ACS +G LE G+ VH  ++  G    ++    L DMYAKCG++  A+R+F
Sbjct: 156 DQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMF 215

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D ++  + + W++MI  Y   G+   A +LF +M   G  P++VT + I+   +  G + 
Sbjct: 216 DGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLG 275

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---DIEGAFKMIHSMPFPANGSIWGALL 674
           + +     +R+         +  ++   S+SG   ++ G +K +         S + ++L
Sbjct: 276 DARTLLKRIRMTSTVA----WNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASIL 331

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEGNWDEFGKV 723
           +        D  + I       G + N +  + L N+Y + G   +  KV
Sbjct: 332 SAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKV 381


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 218/662 (32%), Positives = 357/662 (53%), Gaps = 10/662 (1%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R +  +S   Y S+L   ++   +   + +H  +I  G     ++ T +  TY   G + 
Sbjct: 8   RAKNALSVKQYQSLLNHYAATQSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHIA 66

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE--PDFVTMLSLAEA 205
            ARK+FD+M    ++S++ +I  Y  +    + + +F  MV EG++  PD  T   +A+A
Sbjct: 67  YARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKA 126

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
            GEL S+     IHG +LR    +D  + N+ + MY   G +  A   F  ++ R   SW
Sbjct: 127 AGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISW 186

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
             MIS Y R+G+   AL  F  M+    +P+  T++++L  C  L  L  G++VH  +  
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEE 246

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
           K +G + + +  AL+  Y +CG+M E   V   +  R++++W  +I+ Y   G  + ALE
Sbjct: 247 KRLGDKIE-VKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALE 305

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYS 444
           L   MQ  G+ P++ ++AS +SACG+   L  G  +HG  I+   C D  +++SLI MY+
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYA 365

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KC   +L + +F    +     W+++I G  QN    +A++LF +M    +E +  T  +
Sbjct: 366 KCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNS 425

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER- 563
            + A + +  L +   +H  L   G    +   T L  +Y+KCG L++A ++F+ + E+ 
Sbjct: 426 LLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485

Query: 564 ---NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              +VV W A+I  YGMHG  ++A  +F +M+ SG+ PNE+TF + L ACSHSG VEEG 
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGL 545

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
             F+ M   +       HY C+VDLL R+G ++ A+ +I ++PF    +IWGALL  C  
Sbjct: 546 TLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVT 605

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           H+ + + +    +L      + G Y LL+NIYA  G W +  KVR++ME  GL+K PG+S
Sbjct: 606 HENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHS 665

Query: 740 TI 741
           TI
Sbjct: 666 TI 667



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 174/680 (25%), Positives = 337/680 (49%), Gaps = 51/680 (7%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           + +  ++ K   LH H+ +TG        + L  +YA  G +  +R +FD   +     +
Sbjct: 25  YAATQSISKTKALHCHV-ITGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQSSLLSY 83

Query: 64  AVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            ++I+ Y+ +  + ++I ++ +M+ E  +     + YP V +A   L  +  G  +HGRI
Sbjct: 84  NIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRI 143

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           ++  F  D  +Q ++L  Y  FG ++ AR VFD M +RDV+SW+++I+ Y+ N  +++ L
Sbjct: 144 LRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            MF  MV EGV+PD  T++S+   CG L  L   R++H  V  +++     + N+ + MY
Sbjct: 204 MMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KCG +  A   F ++E+R   +WT MI+ Y   G  + ALE    M      PN +T+ 
Sbjct: 264 LKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIA 323

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +++ +C     L +GK +H   IR+ +  +   +  +LI  YA+C  +  C +V      
Sbjct: 324 SLVSACGDALKLNDGKCLHGWAIRQKVCSDI-IIETSLISMYAKCKHIDLCFRVFSGASR 382

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            +   W+ +I+   +  + ++AL+L  +M+   + P+  ++ S L A   +  L+  + I
Sbjct: 383 NHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNI 442

Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQ----KSVVMWNSMICGFYQ 476
           H ++ K          + L+ +YSKCG    A+ +F  IQ+    K VV+W ++I G+  
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G+   A+ +F +M  + +  +E+TF +A+ ACS+ G +E+G  +   ++ +        
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEH-------- 554

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                               + +++  N   ++ ++D  G  G+L++A +L   +     
Sbjct: 555 --------------------YKTLARSN--HYTCIVDLLGRAGRLDEAYNLITTI---PF 589

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDL---LSRSGDIE 652
           +P    +  +L AC    +V+ G+   N  ++F +EP +  +Y  + ++   L R  D+E
Sbjct: 590 EPTSTIWGALLAACVTHENVQLGEMAAN--KLFELEPENTGNYVLLANIYAALGRWKDME 647

Query: 653 GAFKMIHSMPF---PANGSI 669
               M+ ++     P + +I
Sbjct: 648 KVRNMMENVGLRKKPGHSTI 667



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 112/238 (47%), Gaps = 15/238 (6%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE--- 57
           +P + +  +LR+   +H +L  TG      A+T L+  Y++ G+L S+  +F+  +E   
Sbjct: 427 LPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486

Query: 58  -PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             D  +W  LI  Y  +     ++ ++ +M+R   T +   + S L ACS  G +  G  
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546

Query: 117 VHGRIIKC--GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYFD 173
           +   +++      + +   T I+   G  G LD+A  +   +      + W +++A+   
Sbjct: 547 LFSFMLEHYKTLARSNH-YTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVT 605

Query: 174 NADVSEGLKMFHSMVREGVEP----DFVTMLSLAEACGELCSLRPARSIHGHV-LRRK 226
           + +V  G +M  + + E +EP    ++V + ++  A G    +   R++  +V LR+K
Sbjct: 606 HENVQLG-EMAANKLFE-LEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKK 661


>gi|297721495|ref|NP_001173110.1| Os02g0670700 [Oryza sativa Japonica Group]
 gi|50251347|dbj|BAD28323.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|255671158|dbj|BAH91839.1| Os02g0670700 [Oryza sativa Japonica Group]
          Length = 687

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 222/678 (32%), Positives = 367/678 (54%), Gaps = 8/678 (1%)

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y    + EE I+LY ++   Q  +       VL++C+ L +L  G+ +H   +K G   D
Sbjct: 4   YFRAGYPEEVIILYKRLKLHQIGLDGKTITFVLKSCTELENLYLGKGMHVDSLKFGLSGD 63

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS--EGLKMFHSM 187
             I +S++  Y +   +DD++ VF ++  +DVV+++S+I  Y +  D        +   M
Sbjct: 64  KFIGSSLIVLYSKLHRMDDSQGVFKEIIDKDVVAYTSMITGYSEIVDSVAWNAFDIAIDM 123

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMYSKCGD 246
           ++  +E + VTM+SL +  G L +L+  +S+H + +RR + + D  L    + +Y++CG 
Sbjct: 124 LQGNLEVNRVTMISLLQIAGNLGALKEGKSLHCYSIRRALVVSDYILETCIVNLYTRCGA 183

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLG 305
             SA  T ++  K    SW AM+S   R+G    A+     ML E K  P+ +T   V+ 
Sbjct: 184 YQSAVAT-LQNSKGTAASWNAMLSGLTRAGQSFDAIHYLSVMLHEHKITPDSVTFANVIS 242

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +C  + +     S+H  +IR+ + P    L  AL++ Y++C K++    + + +  ++ +
Sbjct: 243 ACVEVCYFGYAASIHTYLIRRYI-PLDVVLATALVKVYSKCKKITISRHLFNQLIVKDAV 301

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           S+N ++  Y   GM+ EA  LL  M   G++PD  +V S L+A  +   L  G  IHG  
Sbjct: 302 SYNAMMYGYLHNGMANEATSLLNYMMAEGIVPDFATVLSLLAAFADQRDLVRGRWIHGFG 361

Query: 426 IKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           I+   C D  V++ ++ MYS CG    A ++F+ ++QKS+V W +M+ G    G+  E +
Sbjct: 362 IRHGFCSDGDVENHILYMYSVCGKPAAARVIFDLLEQKSLVSWTAMMKGCLPYGHGDEVV 421

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LFH M  +  + D ++ +TA+QA S +G L   K +H  +    + KD     +L   Y
Sbjct: 422 QLFHLMQKHGEKPDSMSLVTAVQAVSELGHLNGLKQIHCFVYRSLLEKDKITANSLISAY 481

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           AKCG L  +  +F S+  RN+ +W+A+I  Y MHG   +   +FKQM +  I+P+E+TF 
Sbjct: 482 AKCGRLDLSVGLFFSLEYRNLDTWNAIISAYAMHGFYINMLEMFKQMEEENIQPDELTFS 541

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +L ACSH+G V++G   FN+M  ++ V P  +HY CMVDLL R+G +E  +K I     
Sbjct: 542 TVLTACSHAGLVKDGWRMFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTL 601

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
               +I+  L++ CR H+   +   I KEL   G    G Y L+S +YA+EG W+EF   
Sbjct: 602 KDKSTIFCVLISACRTHRNTQLALAISKELLEHGPQKPGIYALISEVYAQEGQWNEFTNT 661

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R+   ++GLKK PG S I
Sbjct: 662 RARANLSGLKKHPGSSFI 679



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 260/539 (48%), Gaps = 22/539 (4%)

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           +  YF      E + ++  +    +  D  T+  + ++C EL +L   + +H   L+  +
Sbjct: 1   MVDYFRAGYPEEVIILYKRLKLHQIGLDGKTITFVLKSCTELENLYLGKGMHVDSLKFGL 60

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY----NRSGWFQKALE 283
             D  +G+S IV+YSK   +  ++  F +I  +   ++T+MI+ Y    +   W   A +
Sbjct: 61  SGDKFIGSSLIVLYSKLHRMDDSQGVFKEIIDKDVVAYTSMITGYSEIVDSVAW--NAFD 118

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
             + ML+   E N +T+I++L     LG L+EGKS+HC  IR+ +      L   ++  Y
Sbjct: 119 IAIDMLQGNLEVNRVTMISLLQIAGNLGALKEGKSLHCYSIRRALVVSDYILETCIVNLY 178

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL-VQMQTWGLMPDSFSV 402
             CG        +    +    SWN ++S   R G S +A+  L V +    + PDS + 
Sbjct: 179 TRCGAYQSAVATLQN-SKGTAASWNAMLSGLTRAGQSFDAIHYLSVMLHEHKITPDSVTF 237

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           A+ +SAC  V        IH ++I+     D  + ++L+ +YSKC    ++  LF ++  
Sbjct: 238 ANVISACVEVCYFGYAASIHTYLIRRYIPLDVVLATALVKVYSKCKKITISRHLFNQLIV 297

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K  V +N+M+ G+  NG + EA +L + M    +  D  T L+ + A ++   L +G+W+
Sbjct: 298 KDAVSYNAMMYGYLHNGMANEATSLLNYMMAEGIVPDFATVLSLLAAFADQRDLVRGRWI 357

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H   I +G   D  ++  +  MY+ CG    A+ +FD + ++++VSW+AM+     +G  
Sbjct: 358 HGFGIRHGFCSDGDVENHILYMYSVCGKPAAARVIFDLLEQKSLVSWTAMMKGCLPYGHG 417

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK----FYFNAMRIFGVEPDLQH 637
           ++   LF  M   G KP+ ++ +  + A S  G +   K    F + ++    +E D   
Sbjct: 418 DEVVQLFHLMQKHGEKPDSMSLVTAVQAVSELGHLNGLKQIHCFVYRSL----LEKDKIT 473

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRIDVMKTIEKE 692
              ++   ++ G ++ +  +  S+ +  N   W A+++   +H      +++ K +E+E
Sbjct: 474 ANSLISAYAKCGRLDLSVGLFFSLEYR-NLDTWNAIISAYAMHGFYINMLEMFKQMEEE 531



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 3/209 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +  + R L R   +H   +  G   D      ++  Y+  G   ++R++FD  ++
Sbjct: 339 LSLLAAFADQRDLVRGRWIHGFGIRHGFCSDGDVENHILYMYSVCGKPAAARVIFDLLEQ 398

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W  ++K  +     +E + L+H M +      +    + ++A S LG L   +++
Sbjct: 399 KSLVSWTAMMKGCLPYGHGDEVVQLFHLMQKHGEKPDSMSLVTAVQAVSELGHLNGLKQI 458

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  + +   +KD +   S++  Y + G LD +  +F  +  R++ +W++II++Y  +   
Sbjct: 459 HCFVYRSLLEKDKITANSLISAYAKCGRLDLSVGLFFSLEYRNLDTWNAIISAYAMHGFY 518

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
              L+MF  M  E ++PD +T  ++  AC
Sbjct: 519 INMLEMFKQMEEENIQPDELTFSTVLTAC 547



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L  L ++H  +  + L  D   +  LI +YA+ G L  S  +F + +  +   W  +I 
Sbjct: 451 HLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGRLDLSVGLFFSLEYRNLDTWNAIIS 510

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  + F+   + ++ +M  E        + +VL ACS  G +  G ++   +       
Sbjct: 511 AYAMHGFYINMLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRMFNSMTSV---- 566

Query: 129 DDVIQTSILCTYGEFGCLDD 148
                 S+L     +GC+ D
Sbjct: 567 -----YSVLPQEEHYGCMVD 581


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 192/527 (36%), Positives = 305/527 (57%), Gaps = 4/527 (0%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R IH  +L   ++  G L    I   S  GD+  A + F  + +     W A+I  Y+R+
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
             FQ AL  + KM   +  P+  T   +L +C GL  L+ G+ VH Q+ R G   +  ++
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADV-FV 156

Query: 336 GPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
              LI  YA+C ++     V   +   ER I+SW  ++S YA+ G   EALE+  QM+  
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKM 216

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
            + PD  ++ S L+A   +  L+ G  IH  V+K+  + E  +  SL  MY+KCG    A
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
            +LF++++  ++++WN+MI G+ +NG + +AI+LFH+M    +  D ++  +AI AC+ +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQV 336

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G LE+ +W+   +     R D++I +AL DM+AKCG ++ A+ VFD   +R+VV WSAMI
Sbjct: 337 GSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             YG+HGQ  +A SL++ M   G+ PN+VTF+ +L AC+HSG V EG ++FN M    + 
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKIN 456

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P  QHYAC++DLL R+G ++ A+++I  MP     ++WGALL+ C+ H+ +++ K   ++
Sbjct: 457 PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQ 516

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           L     ++ G+Y  LSN+YA    WD   +VR  M+  GL K  G S
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCS 563



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 278/568 (48%), Gaps = 50/568 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  S T+  +L ++HA LLV GL +     T+LI + +  G +  +R VFD    P  F 
Sbjct: 27  LIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFP 86

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+ Y  NN F++++L+Y KM   + +  +F +P +L+AC  L  L  G  VH ++ 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVF 146

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEG 180
           + GF+ D  +Q  ++  Y +   L  AR VF+   +  R +VSW++I+++Y  N +  E 
Sbjct: 147 RLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEA 206

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++F  M +  V+PD V ++S+  A   L  L   RSIH  V++  ++ +  L  S   M
Sbjct: 207 LEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTM 266

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A+  F K++      W AMIS Y ++G+ + A++ F +M+     P+ I++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISI 326

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            + + +CA +G L + + +   + R     +  ++  ALI+ +A+CG +     V     
Sbjct: 327 TSAISACAQVGSLEQARWMDEYVSRSDYRDDV-FISSALIDMFAKCGSVECARSVFDRTL 385

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +R+++ W+ +I  Y   G ++EA+ L   M+  G+ P+  +    L AC + G ++ G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWW 445

Query: 421 IHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQN 477
               +   KI+ + +   + +ID+  + G  + AY + + +  Q  V +W ++       
Sbjct: 446 FFNRMADHKINPQQQHY-ACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL------- 497

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
                                       + AC     +E GK+   +L S        ID
Sbjct: 498 ----------------------------LSACKKHRHVELGKYAAQQLFS--------ID 521

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNV 565
            + T  Y +  +L  A R++D ++E  V
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRV 549


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 215/657 (32%), Positives = 353/657 (53%), Gaps = 18/657 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKC-------GFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           +L +C     L  G+ +H  ++KC            DV    ++  Y     L  AR VF
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74

Query: 154 DKMTSR--DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           DKM  R  +VV W+ +I +Y  N    E + +++ M+  G+ P+  T   + +AC  L  
Sbjct: 75  DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
               R IH  + R +++ +  +  + +  Y+KCG L  A+  F K+ KR   +W +MIS 
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194

Query: 272 YN-RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           ++   G + +     V+M +    PN  T++ VL + A +  LR GK +H   +R+G   
Sbjct: 195 FSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQ 389
           +   +G  +++ Y +C  +    ++   +G  +N ++W+ ++  Y      +EALEL  Q
Sbjct: 254 DV-VVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQ 312

Query: 390 MQTWG---LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
           +       ++  + ++A+ +  C N+  L  G  +H + IK     D  V ++L+ MY+K
Sbjct: 313 LLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAK 372

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           CG  N A   F  +  +  V + ++I G+ QNGNS E + +F +M L+ +  ++ T  + 
Sbjct: 373 CGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASV 432

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + AC+++  L  G   H   I  G   D  I  AL DMYAKCG + TA++VFD M +R +
Sbjct: 433 LPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGI 492

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           VSW+ MI  YG+HG   +A  LF  M   G+KP++VTF+ ++ ACSHSG V EGK++FNA
Sbjct: 493 VSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNA 552

Query: 626 M-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M + FG+ P ++HYACMVDLLSR+G  +     I  MP   +  +WGALL+ CR++K ++
Sbjct: 553 MTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVE 612

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + + K++   G    G + LLSN+Y+  G WD+  +VR   +  G +K PG S I
Sbjct: 613 LGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWI 669



 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 184/594 (30%), Positives = 316/594 (53%), Gaps = 30/594 (5%)

Query: 3   LFRSCTNLRKLTR---LHAHLLV-------TGL-HYDPPASTRLIESYAEMGSLRSSRLV 51
           L  SC   + L R   +H HLL        T L ++D P   +L++ Y     L+ +R V
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFE-KLVDLYIACSELKIARHV 73

Query: 52  FDTF--KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
           FD    +  +  +W +LI+ Y WN  +EE+I LY+KM+    T + F +P VL+ACS+L 
Sbjct: 74  FDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALK 133

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
           +   G ++H  I +   + +  + T+++  Y + GCLDDA++VFDKM  RDVV+W+S+I+
Sbjct: 134 EASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMIS 193

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
            +  +    + +      ++  V P+  T++ +  A  ++ SLR  + IHG  +RR    
Sbjct: 194 GFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTF-----VKIEKRCTTSWTAMISCYNRSGWFQKALES 284
           D  +G   + +Y KC  +  A R F     VK E     +W+AM+  Y    + ++ALE 
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNE----VTWSAMVGAYVVCDFMREALEL 309

Query: 285 FVKMLEVKEEP---NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
           F ++L +K++    + +TL TV+  CA L  L  G  +HC  I+ G   +   +G  L+ 
Sbjct: 310 FCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDL-MVGNTLLS 368

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            YA+CG ++   +  + +  R+ +S+  +IS Y + G S+E L + ++MQ  G+ P+  +
Sbjct: 369 MYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKAT 428

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           +AS L AC ++  L  G   H + I      D  + ++LIDMY+KCG  + A  +F+R+ 
Sbjct: 429 LASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH 488

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK- 519
           ++ +V WN+MI  +  +G  LEA+ LF  M    L+ D+VTF+  I ACS+ G + +GK 
Sbjct: 489 KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKY 548

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
           W +     +G+   +     + D+ ++ G  +      + M  E +V  W A++
Sbjct: 549 WFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALL 602



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 181/378 (47%), Gaps = 7/378 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK-EPD 59
           +P      +LR    +H   +  G   D    T +++ Y +   +  +R +FD      +
Sbjct: 227 LPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKN 286

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMI---REQATISNFIYPSVLRACSSLGDLGSGEK 116
              W+ ++  Y+  +F  E++ L+ +++    +   +S     +V+R C++L DL +G  
Sbjct: 287 EVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTC 346

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H   IK GF  D ++  ++L  Y + G ++ A + F++M  RD VS+++II+ Y  N +
Sbjct: 347 LHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGN 406

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             EGL+MF  M   G+ P+  T+ S+  AC  L  L      H + +      D  + N+
Sbjct: 407 SEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNA 466

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY+KCG + +A + F ++ KR   SW  MI  Y   G   +AL  F  M     +P+
Sbjct: 467 LIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPD 526

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKV 355
            +T I ++ +C+  G + EGK     + +  G+ P  ++    +++  +  G   E    
Sbjct: 527 DVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYA-CMVDLLSRAGLFKEVHSF 585

Query: 356 IHAIG-ERNILSWNMLIS 372
           I  +  E ++  W  L+S
Sbjct: 586 IEKMPLEPDVRVWGALLS 603


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 234/669 (34%), Positives = 363/669 (54%), Gaps = 31/669 (4%)

Query: 83  YHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG 141
           YH+M +  A +++  +  S+L+ACSSL                GFD       S+L  Y 
Sbjct: 37  YHQMKKAGAQLTDPTLVHSILKACSSLP---------------GFDSLTSTGNSVLDFYM 81

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           + G LD A  VFD M SRD VSW+ +I  +       +GL  F        EP+  T++ 
Sbjct: 82  KTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVL 141

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
              AC  L ++     +HG+++R        + NS + MY+   D+  AE  F ++ +R 
Sbjct: 142 AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERD 200

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
             SW+ MI  Y ++G  + AL+ F++M      E + IT+++VL +CA  G +  G+SVH
Sbjct: 201 VISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVH 260

Query: 321 CQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
             +I +G+  +YD ++G ++I+ Y++C       K  + +  RN +SWN +IS   R   
Sbjct: 261 GVVICRGL--DYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEK 318

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCK-DEFVQS 437
             EAL L   M   G   D  ++ + L +C   V   Q    IH  VI+   + +EFV +
Sbjct: 319 HSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF-IHSIVIRWGYELNEFVIN 377

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SLID YSKC    LA+ LF+R++ K  V W++MI GF   G   EAI LF +M     + 
Sbjct: 378 SLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKP 437

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           + VT L+ ++A S    L++ KW H   I  G+  ++ + TA+ DMYAKCG++  +++ F
Sbjct: 438 NGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAF 497

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D + E+N+VSW AMI   GM+G   DA +L  +M   G+KPN VT +++L ACSH G VE
Sbjct: 498 DQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVE 557

Query: 618 EG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALL 674
           EG  F+ N ++  GVEP L+HY+CMVD+LSR+G +  A  +I  MP        +WGALL
Sbjct: 558 EGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALL 617

Query: 675 NGCRI--HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           + CR   + R+       + L +   +  GY+ L S++YA  G W +  ++R +++  G+
Sbjct: 618 SACRSSGNSRLGAGAAF-RVLELEPQSSAGYF-LASSMYAASGLWADAARMRWLVKARGV 675

Query: 733 KKVPGYSTI 741
           + V GYS +
Sbjct: 676 RVVAGYSLV 684



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/555 (29%), Positives = 285/555 (51%), Gaps = 16/555 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYH--KMIREQAT 92
           +++ Y + G+L S+  VFD+ +  DS  W ++I  ++     ++ +  +   ++I  +  
Sbjct: 76  VLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPN 135

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           +S  +    + AC SLG +  G K+HG II+ GF     +Q S+L  Y +   ++ A ++
Sbjct: 136 VSTLVL--AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEEL 192

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCS 211
           FD+M  RDV+SWS +I  Y    +    L++F  M     +E D +TM+S+ +AC     
Sbjct: 193 FDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGD 252

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           +   RS+HG V+ R +  D  +GNS I MYSKC D  SA + F ++  R T SW ++IS 
Sbjct: 253 ISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISG 312

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
             R+    +AL  F  M +     + +TL+ +L SC       + K +H  +IR G    
Sbjct: 313 LVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELN 372

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
            +++  +LI+ Y++C  +    K+   +  ++ +SW+ +I+ +   G   EA+ L  +M 
Sbjct: 373 -EFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMN 431

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKN 450
                P+  ++ S L A      L+     HG  I+     E  V ++++DMY+KCG   
Sbjct: 432 QAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIG 491

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           L+   F++I +K++V W +MI     NG + +A+ L  +M L+ L+ + VT L+ + ACS
Sbjct: 492 LSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACS 551

Query: 511 NIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           + G +E+G      ++  +GV   +   + + DM ++ G L +A  + + M ER      
Sbjct: 552 HGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER------ 605

Query: 570 AMIDCYGMHGQLNDA 584
            M D  G+ G L  A
Sbjct: 606 -MRDGAGLWGALLSA 619



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 256/482 (53%), Gaps = 8/482 (1%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           RS   + +  ++H +++ +G    P     L+  YA+    R+  L FD   E D   W+
Sbjct: 147 RSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADNDMERAEEL-FDEMCERDVISWS 205

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQAT-ISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           V+I  Y+     + ++ L+ +M    +  +      SVL+AC++ GD+  G  VHG +I 
Sbjct: 206 VMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVIC 265

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G D D  +  SI+  Y +    + A K F++M  R+ VSW+SII+        SE L +
Sbjct: 266 RGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSL 325

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F+SM + G   D VT+++L ++C         + IH  V+R   +++  + NS I  YSK
Sbjct: 326 FYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSK 385

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           C  +  A + F +++ + T SW+AMI+ +N  G   +A+  F +M + +E+PN +T++++
Sbjct: 386 CDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSL 445

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L + +    L+  K  H   IR+G+  E   +G A+++ YA+CG++    K    I E+N
Sbjct: 446 LEAFSVSADLKRSKWAHGIAIRRGLAAEVA-VGTAILDMYAKCGEIGLSRKAFDQIPEKN 504

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           I+SW  +I+     G++++AL LL +M+  GL P+  +  S LSAC + G ++ GL    
Sbjct: 505 IVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFE 564

Query: 424 HVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQK---SVVMWNSMICGFYQNG 478
           ++++    +  ++  S ++DM S+ G  N A  L E++ ++      +W +++     +G
Sbjct: 565 NMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSG 624

Query: 479 NS 480
           NS
Sbjct: 625 NS 626



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 200/420 (47%), Gaps = 15/420 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C N   ++    +H  ++  GL YD      +I+ Y++     S+   F+     +
Sbjct: 243 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 302

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  +I   +      E++ L++ M +           ++L++C    D    + +H 
Sbjct: 303 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHS 362

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+ G++ ++ +  S++  Y +   ++ A K+FD++ ++D VSWS++IA +       E
Sbjct: 363 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE 422

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  M +   +P+ VT+LSL EA      L+ ++  HG  +RR +  +  +G + + 
Sbjct: 423 AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILD 482

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG++  + + F +I ++   SW AMI+    +G  + AL    +M     +PN++T
Sbjct: 483 MYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVT 542

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            ++VL +C+  G + EG S    +++  G+ P  ++    +++  +  GK++    +I  
Sbjct: 543 TLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYS-CMVDMLSRAGKLNSAMNLIEK 601

Query: 359 IGER---NILSWNMLISEYARKGMSK-------EALELLVQMQTWGLMPDSFSVASSLSA 408
           + ER       W  L+S     G S+         LEL  Q      +  S   AS L A
Sbjct: 602 MPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWA 661


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 237/757 (31%), Positives = 397/757 (52%), Gaps = 20/757 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C+ L  L+    +H  ++V G  YDP  +T L+  Y + G L  +  VFD + +  
Sbjct: 66  LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQ 125

Query: 59  ------DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL- 111
                 D  +W  +I  Y     F+E +  + +M+        F    V+      G+  
Sbjct: 126 SGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFR 185

Query: 112 -GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIA 169
              G+++HG +++   D D  ++T+++  Y +FG   DA +VF ++  + +VV W+ +I 
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
            +  +      L ++       V+    +      AC +  +    R IH  V++  +  
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           D  +  S + MYSKCG +  AE  F  +  +    W AM++ Y  + +   AL+ F  M 
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
           +    P+  TL  V+  C+ LG    GKSVH ++ ++ +      +  AL+  Y++CG  
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPI-QSTSTIESALLTLYSKCGCD 424

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW--GLMPDSFSVASSLS 407
            +   V  ++ E+++++W  LIS   + G  KEAL++   M+     L PDS  + S  +
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484

Query: 408 ACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC  + +L+ GLQ+HG +IK     + FV SSLID+YSKCG   +A  +F  +  +++V 
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WNSMI  + +N     +I+LF+ M    +  D V+  + + A S+   L KGK +H   +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
             G+  D ++  AL DMY KCG  + A+ +F  M  +++++W+ MI  YG HG    A S
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLL 645
           LF +M  +G  P++VTF++++ AC+HSG VEEGK  F  M+  +G+EP+++HYA MVDLL
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYY 704
            R+G +E A+  I +MP  A+ SIW  LL+  R H  +++ + + EK L +     + Y 
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            L+ N+Y E G  +E  K+  +M+  GL K PG S I
Sbjct: 785 QLI-NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 176/571 (30%), Positives = 299/571 (52%), Gaps = 18/571 (3%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           S F +PS+L+ACS+L +L  G+ +HG ++  G+  D  I TS++  Y + G LD A +VF
Sbjct: 59  SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118

Query: 154 D-------KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD-FVTMLSLAEA 205
           D        +++RDV  W+S+I  YF      EG+  F  M+  GV PD F   + ++  
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178

Query: 206 CGELCSLR-PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
           C E    R   + IHG +LR  +  D  L  + I MY K G  + A R FV+IE +    
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238

Query: 265 -WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI--TLITVLGSCAGLGWLREGKSVHC 321
            W  MI  +  SG  + +L+ +  ML       L+  +    LG+C+       G+ +HC
Sbjct: 239 LWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            +++ G+  +  Y+  +L+  Y++CG + E E V   + ++ +  WN +++ YA      
Sbjct: 297 DVVKMGLHND-PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLI 440
            AL+L   M+   ++PDSF++++ +S C  +G    G  +H  + K   +    ++S+L+
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMD 498
            +YSKCG    AYL+F+ +++K +V W S+I G  +NG   EA+ +F  M    + L+ D
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
                +   AC+ +  L  G  VH  +I  G+  ++++ ++L D+Y+KCG  + A +VF 
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT 535

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           SMS  N+V+W++MI CY  +     +  LF  ML  GI P+ V+  ++L A S + S+ +
Sbjct: 536 SMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           GK         G+  D      ++D+  + G
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 10/219 (4%)

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV-TFLTAIQACSNIGQLEKGKWVHHKLI 526
           NS I    Q G  L+A++L+ +   +      V TF + ++ACS +  L  GK +H  ++
Sbjct: 28  NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD-------SMSERNVVSWSAMIDCYGMHG 579
             G R D +I T+L +MY KCG L  A +VFD        +S R+V  W++MID Y    
Sbjct: 88  VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV--EEGKFYFNAMRIFGVEPDLQH 637
           +  +    F++ML  G++P+  +   ++      G+   EEGK     M    ++ D   
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              ++D+  + G    A+++   +   +N  +W  ++ G
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 224/786 (28%), Positives = 385/786 (48%), Gaps = 85/786 (10%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L +SC   + L+    +HA +    L  D      LI+ Y++   + S+  VFD     +
Sbjct: 11  LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKM--------------------------------I 87
            F +  ++  +  +N  + +  L+ +M                                +
Sbjct: 71  IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
            E    S+  + +V  AC  L D+  G + HG ++K GFD +  +  ++LC Y + G  +
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNE 190

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA +VF+ +   + V++++++        V EGL++F  M+R+G+  D V++ ++   C 
Sbjct: 191 DAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICA 250

Query: 208 E------------LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           +            L +    + IH   ++   + D  L NS + MY+K GD+ SAE  F 
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            ++K    SW  MIS Y      +KALE F +M     EP+ +T I +L +C   G ++ 
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKV 370

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+                                    ++   +   +++SWN ++S Y 
Sbjct: 371 GR------------------------------------QIFDCMSSPSLISWNAILSGYN 394

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
           +     EA+EL  +MQ     PD  ++A  LS+C  +G L+ G Q+H    K+   D+ +
Sbjct: 395 QSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVY 454

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V SSLI++YSKCG   ++  +F ++ +  VV WNSMI GF  N    +A+  F +M    
Sbjct: 455 VASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFG 514

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
               E +F T   +C+ +  L +G+ +H ++I  G   ++++ ++L +MY KCGD+  A+
Sbjct: 515 FFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAAR 574

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             FD M  +N+V+W+ MI  Y  +G   +A SL+K M+ SG KP+++TF+ +L ACSHS 
Sbjct: 575 YYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSA 634

Query: 615 SVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            V+EG   F++M + F V P L HY C++D L R G       ++ +MP+  +  +W  +
Sbjct: 635 LVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVV 694

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CR+H  + + K   +EL      ++  Y LL+N+Y+  G WD+   VR +M    + 
Sbjct: 695 LSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIH 754

Query: 734 KVPGYS 739
           K PGYS
Sbjct: 755 KDPGYS 760



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 233/534 (43%), Gaps = 82/534 (15%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +E   + +++L ++C    SL  A+ IH  + R  +  D  L N  I +YSKC  + SA 
Sbjct: 1   MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-------------VKE----- 293
             F KI  +   S+ A++S + +S   Q A   F++M E             VK      
Sbjct: 61  HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQ 120

Query: 294 --------------EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
                         +P+ IT  TV  +C GL  +  G+  H  +++ G      Y+  AL
Sbjct: 121 ALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNI-YVSNAL 179

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           +  Y +CG   +  +V   I E N +++  ++   ++    KE LEL   M   G+  DS
Sbjct: 180 LCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDS 239

Query: 400 FSVASSLSACGNVGSLQL------------GLQIHGHVIKIDC-KDEFVQSSLIDMYSKC 446
            S+++ L  C    S  +            G QIH   +K    +D  + +SL+DMY+K 
Sbjct: 240 VSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKT 299

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  + A  +FE + + SVV WN MI G+    +S +A+  F +M     E D+VT++  +
Sbjct: 300 GDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINML 359

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            AC                                    K GD++  +++FD MS  +++
Sbjct: 360 TAC-----------------------------------VKSGDVKVGRQIFDCMSSPSLI 384

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW+A++  Y       +A  LF++M      P+  T   IL +C+  G +E GK      
Sbjct: 385 SWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVS 444

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           +  G   D+   + ++++ S+ G +E + K + S     +   W +++ G  I+
Sbjct: 445 QKLGFYDDVYVASSLINVYSKCGKMEVS-KHVFSKLSELDVVCWNSMIAGFSIN 497



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 136/585 (23%), Positives = 257/585 (43%), Gaps = 66/585 (11%)

Query: 4   FRSCTNLRKLT------RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           F  C + R L+      ++H   +  G   D      L++ YA+ G + S+  VF+   +
Sbjct: 255 FGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDK 314

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W ++I  Y      E+++  + +M                  C            
Sbjct: 315 HSVVSWNIMISGYGNRCDSEKALECFQRM-----------------QC------------ 345

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
                 CG++ DDV   ++L    + G +   R++FD M+S  ++SW++I++ Y  +AD 
Sbjct: 346 ------CGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADH 399

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++F  M  +   PD  T+  +  +C EL  L   + +H    +     D  + +S 
Sbjct: 400 GEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSL 459

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I +YSKCG +  ++  F K+ +     W +MI+ ++ +   Q AL  F +M +    P+ 
Sbjct: 460 INVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSE 519

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            +  T+  SCA L  L +G+ +H QII+ G      ++G +L+E Y +CG +        
Sbjct: 520 FSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNV-FVGSSLVEMYCKCGDVGAARYYFD 578

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  +NI++WN +I  YA  G   EA+ L   M + G  PD  +  + L+AC +   +  
Sbjct: 579 MMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDE 638

Query: 418 GLQIHGHVIKIDCKDEFVQ-----SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI 471
           G++I   +++   K E V      + +ID   + G  N   ++ + +  K   ++W  ++
Sbjct: 639 GVEIFSSMLQ---KFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVL 695

Query: 472 CGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVH-------- 522
                + N   A     +++ LN    +   ++      S++G+ +  + V         
Sbjct: 696 SSCRVHANVSLAKRAAEELHRLN--PRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQI 753

Query: 523 HKLISYG---VRKDIYIDTA-LTDMYAKCGDLQTAQRVFDSMSER 563
           HK   Y     + D+   T+   +MY+  G+L  AQ V D  S++
Sbjct: 754 HKDPGYSRSEFKYDVQNKTSFFANMYSCFGNLDDAQFVRDLTSDK 798


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 213/665 (32%), Positives = 373/665 (56%), Gaps = 10/665 (1%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M ++ A      Y  +L++C    +   G+ VH ++++ G + D V+  +++  Y + G 
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 146 LDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
            + AR +F+ M   RD+VSWS++++ + +N+   + +  F  M+  G  P+     ++  
Sbjct: 95  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154

Query: 205 ACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSK-CGDLLSAERTFVKIEKRCT 262
           AC           I+G V++   ++ D  +G   I M+ K  GDL SA + F K+ +R  
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +WT MI+ + + G  + A++ F+ M      P+  T  +VL +C  LG L  GK +H +
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 274

Query: 323 IIRKGMGPEYDYLGPALIEFYAEC---GKMSECEKVIHAIGERNILSWNMLISEYARKG- 378
           +IR G+  +   +G +L++ YA+C   G + +  KV   + E N++SW  +I+ Y + G 
Sbjct: 275 VIRLGLALDV-CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 333

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQS 437
             KEA+EL  +M +  + P+ FS +S L ACGN+     G Q++ + +K+       V +
Sbjct: 334 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN 393

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SLI MY++ G    A   F+ + +K++V +N+++ G+ +N  S EA  LF+++    + +
Sbjct: 394 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 453

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
              TF + +   ++IG + KG+ +H +L+  G + +  I  AL  MY++CG+++ A +VF
Sbjct: 454 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 513

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           + M +RNV+SW++MI  +  HG    A  +F +ML++G KPNE+T++ +L ACSH G + 
Sbjct: 514 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 573

Query: 618 EGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EG+ +FN+M +  G+ P ++HYACMVDLL RSG +  A + I+SMP  A+  +W  LL  
Sbjct: 574 EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 633

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+H   ++ +   + +     +D   Y LLSN++A  G W +  K+R  M+   L K  
Sbjct: 634 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEA 693

Query: 737 GYSTI 741
           G S I
Sbjct: 694 GCSWI 698



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 186/676 (27%), Positives = 335/676 (49%), Gaps = 58/676 (8%)

Query: 3   LFRSCTNLR--KLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEP 58
           L +SC   R  +L +L H  L+ +GL  D      LI  Y++ G   ++RL+F+    + 
Sbjct: 50  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 109

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W+ ++ C+  N+   ++I  +  M+      + + + +V+RACS+      GE ++
Sbjct: 110 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169

Query: 119 GRIIKCGFDKDDV-IQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           G ++K G+ + DV +   ++  + +  G L  A KVFDKM  R++V+W+ +I  +     
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 229

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             + + +F  M   G  PD  T  S+  AC EL  L   + +H  V+R  + +D  +G S
Sbjct: 230 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 289

Query: 237 FIVMYSKC---GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK-ALESFVKMLEVK 292
            + MY+KC   G +  + + F ++ +    SWTA+I+ Y +SG   K A+E F KM+   
Sbjct: 290 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH 349

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             PN  +  +VL +C  L     G+ V+   ++ G+    + +G +LI  YA  G+M + 
Sbjct: 350 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA-SVNCVGNSLISMYARSGRMEDA 408

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            K    + E+N++S+N ++  YA+   S+EA  L  ++   G+   +F+ AS LS   ++
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468

Query: 413 GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           G++  G QIHG ++K   K ++ + ++LI MYS+CG    A+ +F  ++ ++V+ W SMI
Sbjct: 469 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 528

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            GF ++G +  A+ +FH+M     + +E+T++  + ACS++G + +G             
Sbjct: 529 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG------------- 575

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVS----WSAMIDCYGMHGQLNDAAS 586
                                 Q+ F+SM  E  +V     ++ M+D  G  G L +A  
Sbjct: 576 ----------------------QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 613

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLL 645
               M    +  + + +  +L AC   G+ E G+    A  I   EP D   Y  + +L 
Sbjct: 614 FINSM---PLMADALVWRTLLGACRVHGNTELGR--HAAEMILEQEPDDPAAYILLSNLH 668

Query: 646 SRSGDIEGAFKMIHSM 661
           + +G  +   K+  SM
Sbjct: 669 ASAGQWKDVVKIRKSM 684



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 209/409 (51%), Gaps = 10/409 (2%)

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G    A  +   M +    P+L T   +L SC      + GK VH ++++ G+  +   L
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 336 GPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
              LI  Y++CG       +   +G +R+++SW+ ++S +A   M  +A+   + M   G
Sbjct: 83  N-TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSK-CGFKNL 451
             P+ +  A+ + AC N     +G  I+G V+K      D  V   LIDM+ K  G    
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           AY +F+++ ++++V W  MI  F Q G + +AI+LF  M L+    D  T+ + + AC+ 
Sbjct: 202 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC---GDLQTAQRVFDSMSERNVVSW 568
           +G L  GK +H ++I  G+  D+ +  +L DMYAKC   G +  +++VF+ M E NV+SW
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321

Query: 569 SAMIDCYGMHGQLN-DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           +A+I  Y   G+ + +A  LF +M+   I+PN  +F ++L AC +      G+  ++   
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 381

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             G+         ++ + +RSG +E A K    + F  N   + A+++G
Sbjct: 382 KLGIASVNCVGNSLISMYARSGRMEDARKAF-DILFEKNLVSYNAIVDG 429


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 206/650 (31%), Positives = 357/650 (54%), Gaps = 19/650 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKM 156
           Y   LR C    DL S  ++H RI   G    +V +   I+  YG+ G +  AR  FD +
Sbjct: 30  YRDALRQCQ---DLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARAAFDAI 84

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             ++  SW S++ +Y  N      L ++  M    ++P+ V   ++  AC  + +L   +
Sbjct: 85  ARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGK 141

Query: 217 SIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           +IH  +   K +K+D  L NS + MY+KCG L  A+R F ++  R  +SW AMI+ Y +S
Sbjct: 142 AIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQS 201

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY- 334
           G F++A+  +  M     EP++ T  +VL +C+ LG L +G+ +H  I  +G   E D  
Sbjct: 202 GHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT--ELDLS 256

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           L  AL+  YA C  + +  K+   +  R+++SW+ +I+ +A   +  EA+E   +MQ  G
Sbjct: 257 LQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG 316

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAY 453
           + P+ ++ AS L AC +VG L+ G  +H  ++    K   V  ++L+D+Y+  G  + A 
Sbjct: 317 VRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEAR 376

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNI 512
            LF++I+ +   +W  +I G+ + G+    + L+ +M     +   ++ +   I AC+++
Sbjct: 377 SLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASL 436

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G     +  H  + + G+  D  + T+L +MY++ G+L++A++VFD MS R+ ++W+ +I
Sbjct: 437 GAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLI 496

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGV 631
             Y  HG+   A  L+K+M   G +P+E+TFM +L+ACSH+G  E+GK  F +++  + +
Sbjct: 497 AGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAM 556

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            P++ HY+C++DLLSR+G +  A ++I++MP   N   W +LL   RIHK +        
Sbjct: 557 HPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAG 616

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +++     D   Y LLSN++A  GN      VR+ M   G+KK  G S I
Sbjct: 617 QITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWI 666



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/594 (28%), Positives = 307/594 (51%), Gaps = 15/594 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            R C +L  + ++H  +       +      ++ +Y + GS+ S+R  FD     + + W
Sbjct: 34  LRQCQDLESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSW 92

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             ++  Y  N  +  ++ LY +M  +   +   +Y +VL AC+S+  L  G+ +H RI  
Sbjct: 93  GSMLTAYAQNGHYRAALDLYKRMDLQPNPV---VYTTVLGACASIKALEEGKAIHSRISG 149

Query: 124 C-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
             G   D +++ S+L  Y + G L+DA+++F++M+ R V SW+++IA+Y  +    E ++
Sbjct: 150 TKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIR 209

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           ++  M    VEP   T  S+  AC  L  L   R IH  +  R  ++D  L N+ + MY+
Sbjct: 210 LYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA 266

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           +C  L  A + F ++ +R   SW+AMI+ +  +  F +A+E + KM      PN  T  +
Sbjct: 267 RCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 326

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGE 361
           VL +CA +G LR G++VH QI+  G G +   + G AL++ Y   G + E   +   I  
Sbjct: 327 VLLACASVGDLRAGRAVHDQIL--GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIEN 384

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS-SLSACGNVGSLQLGLQ 420
           R+   W +LI  Y+++G     LEL  +M+    +P +  + S  +SAC ++G+     Q
Sbjct: 385 RDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQ 444

Query: 421 IHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
            H  +       +FV  +SL++MYS+ G    A  +F+++  +  + W ++I G+ ++G 
Sbjct: 445 AHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGE 504

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDT 538
              A+ L+ +M L   E  E+TF+  + ACS+ G  E+GK +   + S Y +  +I   +
Sbjct: 505 HGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYS 564

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            + D+ ++ G L  A+ + ++M  E N V+WS+++    +H  +  A     Q+
Sbjct: 565 CIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQI 618


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 212/648 (32%), Positives = 345/648 (53%), Gaps = 5/648 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S++ AC++   L   +K+H  ++K  +    ++Q  ++  YG+ G + DARKVFD M 
Sbjct: 162 YTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQ 221

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             +VVSW+S+I+ Y  N   ++ + M+  M R G  PD +T  S+ +AC     +   R 
Sbjct: 222 LPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQ 281

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H HV++          N+ I MY+  G +  A   F +I  +   SW  MI+ Y + G+
Sbjct: 282 LHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGY 341

Query: 278 FQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             +AL  F  +L +   +PN     +V  +C+ L  L  GK VH   ++ G+     + G
Sbjct: 342 RVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNV-FAG 400

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +L + YA+ G +   +     I   +I+SWN +I+ +A  G + EA++   QM   GL 
Sbjct: 401 CSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLT 460

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
           PDS +  S L  CG+   L  G QIH +++KI    E  V +SL+ MY+KC   + A  +
Sbjct: 461 PDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNV 520

Query: 456 FERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           F  I + + +V WN+++    Q     E   L+ +M+ +  + D +T  T +  C+ +  
Sbjct: 521 FRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTS 580

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L  G  VH   I  G+  D+ +   L DMYAKCG L+ A+ VFDS    ++VSWS++I  
Sbjct: 581 LGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVG 640

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEP 633
           Y   G  ++A +LF+ M + G++PNEVT++  L ACSH G VEEG   + +M    G+ P
Sbjct: 641 YAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPP 700

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             +H++C+VDLL+R+G +  A   I      A+ + W  LL  C+ H  +D+ +     +
Sbjct: 701 TREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNI 760

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                +++    +L NI+A  GNW+E  K+R +M+  G++KVPG S I
Sbjct: 761 LKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWI 808



 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 297/591 (50%), Gaps = 11/591 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C N R L    ++H H+L +           +I  Y + GS++ +R VFDT + P+
Sbjct: 165 LVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPN 224

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N    ++I++Y +M R         + SV++AC   GD+  G ++H 
Sbjct: 225 VVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHA 284

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +IK  F      Q +++  Y  FG ++ A  VF ++ ++D++SW ++I  Y       E
Sbjct: 285 HVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVE 344

Query: 180 GLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L +F  ++R+G  +P+     S+  AC  L  L   + +HG  ++  ++ +   G S  
Sbjct: 345 ALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLC 404

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G L SA+  F +I+     SW A+I+ +  +G   +A++ F +M+ +   P+ I
Sbjct: 405 DMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSI 464

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T I++L +C     L +G+ +H  I++ G   E      +L+  Y +C  + +   V   
Sbjct: 465 TYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCN-SLLTMYTKCSHLHDALNVFRD 523

Query: 359 IGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           I    N++SWN ++S   +K    E   L  +M   G  PDS ++ + L  C  + SL +
Sbjct: 524 ISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGV 583

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G Q+H + IK     D  V + LIDMY+KCG    A  +F+  Q   +V W+S+I G+ Q
Sbjct: 584 GNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQ 643

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDI 534
            G   EA+NLF  M    ++ +EVT+L A+ ACS+IG +E+G W  +K +   +G+    
Sbjct: 644 CGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEG-WRLYKSMETEHGIPPTR 702

Query: 535 YIDTALTDMYAKCGDLQTAQRVFD-SMSERNVVSWSAMIDCYGMHGQLNDA 584
              + + D+ A+ G L  A+     S  + ++ +W  ++     H  ++ A
Sbjct: 703 EHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIA 753



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 235/469 (50%), Gaps = 14/469 (2%)

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           EP   T  SL  AC    SL  A+ IH HVL+   +    L N  I MY KCG +  A +
Sbjct: 158 EPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARK 215

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  ++     SWT+MIS Y+++G    A+  +++M    + P+ +T  +V+ +C   G 
Sbjct: 216 VFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGD 275

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  G+ +H  +I+   G        ALI  Y   G++     V   I  ++++SW  +I+
Sbjct: 276 IDLGRQLHAHVIKSWFGHHLTSQN-ALISMYTNFGQIEHASNVFTRIPTKDLISWGTMIT 334

Query: 373 EYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC- 430
            Y + G   EAL L   +   G   P+ F   S  SAC ++  L+ G Q+HG  +K    
Sbjct: 335 GYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLR 394

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           ++ F   SL DMY+K GF   A + F +I+   +V WN++I  F  NG++ EAI+ F QM
Sbjct: 395 RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM 454

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               L  D +T+++ +  C +  +L +G+ +H  ++  G  K+I +  +L  MY KC  L
Sbjct: 455 IHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHL 514

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
             A  VF  +S   N+VSW+A++       Q  +   L+K+M  SG KP+ +T   +L  
Sbjct: 515 HDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGT 574

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEP----DLQHYACMVDLLSRSGDIEGA 654
           C+   S+  G    N +  + ++     D+     ++D+ ++ G ++ A
Sbjct: 575 CAELTSLGVG----NQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHA 619



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 9/209 (4%)

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           +C  +    +LEA + FH    N    +  T+ + + AC+N   L+  K +H  ++    
Sbjct: 133 LCKQHHYKEALEAFD-FHLKNSNS-HFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNY 190

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           +  I +   + +MY KCG ++ A++VFD+M   NVVSW++MI  Y  +GQ NDA  ++ Q
Sbjct: 191 QPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQ 250

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI---FGVEPDLQHYACMVDLLSR 647
           M  SG  P+++TF +++ AC  +G ++ G+   +A  I   FG     Q+   ++ + + 
Sbjct: 251 MTRSGQFPDQLTFGSVIKACYIAGDIDLGR-QLHAHVIKSWFGHHLTSQN--ALISMYTN 307

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            G IE A  +   +P     S WG ++ G
Sbjct: 308 FGQIEHASNVFTRIPTKDLIS-WGTMITG 335


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 210/648 (32%), Positives = 355/648 (54%), Gaps = 17/648 (2%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           ++ R C+   +L S + +H R++     ++  I   ++  Y   G +  AR  FD + +R
Sbjct: 59  TLFRYCT---NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFH-SMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           DV +W+ +I+ Y      SE ++ F   M+  G++PD+ T  S+ +AC  +        I
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKI 172

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H   L+     D  +  S I +Y + G +++A   F ++  R   SW AMIS Y +SG  
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNA 232

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++AL     + +     + +T++++L +C   G    G ++H   I+ G+  E  ++   
Sbjct: 233 KEAL----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL-FVSNK 287

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI+ YAE G + +C+KV   +  R+++SWN +I  Y        A+ L  +M+   + PD
Sbjct: 288 LIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPD 347

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
             ++ S  S    +G ++    + G  ++     +D  + ++++ MY+K G  + A  +F
Sbjct: 348 CLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM--DEVTFLTAIQACSNIGQ 514
             +  K V+ WN++I G+ QNG + EAI +++ M     E+  ++ T+++ + ACS  G 
Sbjct: 408 NWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGA 467

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L +G  +H +L+  G+  D+++ T+L DMY KCG L  A  +F  +   N V W+ +I C
Sbjct: 468 LRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIAC 527

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEP 633
           +G HG    A  LFK+MLD G+KP+ +TF+ +L ACSHSG V+EG++ F  M+  +G+ P
Sbjct: 528 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITP 587

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            L+HY CMVDL  R+G +E A   I SMP   + SIWGALL+ CR+H  +D+ K   + L
Sbjct: 588 SLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHL 647

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                   GY+ LLSN+YA  G W+   ++RSI    GL+K PG+S++
Sbjct: 648 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSM 695



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 172/612 (28%), Positives = 318/612 (51%), Gaps = 17/612 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LFR CTNL+    LHA L+V+    +   S +L+  Y  +G++  +R  FD     D + 
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYA 119

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
           W ++I  Y    +  E I  +   +       ++  +PSVL+AC ++ D   G K+H   
Sbjct: 120 WNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLA 176

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K GF  D  +  S++  Y  +G + +AR +FD+M +RD+ SW+++I+ Y  + +  E L
Sbjct: 177 LKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL 236

Query: 182 KMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            +      +G+   D VT++SL  AC E        +IH + ++  ++ +  + N  I +
Sbjct: 237 TL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y++ G L   ++ F ++  R   SW ++I  Y  +    +A+  F +M   + +P+ +TL
Sbjct: 292 YAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTL 351

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           I++    + LG +R  +SV    +RKG   E   +G A++  YA+ G +     V + + 
Sbjct: 352 ISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVGSLQLG 418
            ++++SWN +IS YA+ G + EA+E+   M+  G  +  +  +  S L AC   G+L+ G
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG 471

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           +++HG ++K     D FV +SL DMY KCG  + A  LF +I + + V WN++I     +
Sbjct: 472 MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFH 531

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYI 536
           G+  +A+ LF +M    ++ D +TF+T + ACS+ G +++G+W    +   YG+   +  
Sbjct: 532 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKH 591

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
              + D+Y + G L+ A     SM  + +   W A++    +HG ++      + + +  
Sbjct: 592 YGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE-- 649

Query: 596 IKPNEVTFMNIL 607
           ++P  V +  +L
Sbjct: 650 VEPEHVGYHVLL 661



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 56/115 (48%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR+  +LH  LL  GL+ D    T L + Y + G L  +  +F      +S
Sbjct: 459 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNS 518

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
             W  LI C+ ++   E++++L+ +M+ E     +  + ++L ACS  G +  GE
Sbjct: 519 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGE 573


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 226/699 (32%), Positives = 371/699 (53%), Gaps = 65/699 (9%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           I P  +  C ++  +   + +H +++  G    + + + ++ TY   GCL  A  +  + 
Sbjct: 30  ITPPFIHKCKTISQV---KLIHQKLLSFGILTLN-LTSHLISTYISLGCLSHAVSLLRRF 85

Query: 157 TSRD--VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
              D  V  W+S+I SY +N   ++ L  F  M      PD  T   + +ACGE+ S+R 
Sbjct: 86  PPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRC 145

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
             S H          +  +GN+ + MYS+CG L  A + F ++      SW ++I  Y +
Sbjct: 146 GDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAK 205

Query: 275 SGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
            G  + ALE F KM  E    P+ ITL+ VL  CA +G    GK  H   +   M  +  
Sbjct: 206 LGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEM-IQNM 264

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML----------------------- 370
           ++G  L++ YA+ G M E   V   +  ++++SWN +                       
Sbjct: 265 FVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEE 324

Query: 371 ------------ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
                       IS YA++G+  EAL +  QM + G+ P+  ++ S LS C +VG+L  G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384

Query: 419 LQIHGHVIK--IDCK------DEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWN 468
            +IH + IK  +D +      +  V + LIDMY+KC   ++A  +F+ +  +++ VV W 
Sbjct: 385 KEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWT 444

Query: 469 SMICGFYQNGNSLEAINLFHQMYL-NC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
            MI G+ Q+G++ +A+ L  +M+  +C    +  T   A+ AC+++  L  GK +H    
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIH---- 500

Query: 527 SYGVRKD-----IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           +Y +R       +++   L DMYAKCGD+  A+ VFD+M E+N V+W++++  YGMHG  
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYG 560

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYAC 640
            +A  +F++M   G K + VT + +L+ACSHSG +++G  YFN M+  FGV P  +HYAC
Sbjct: 561 EEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYAC 620

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           +VDLL R+G +  A ++I  MP      +W ALL+ CRIH ++++ +   K+++   +N+
Sbjct: 621 LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNN 680

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +G YTLLSN+YA  G W +  ++RS+M   G+KK PG S
Sbjct: 681 DGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCS 719



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 177/633 (27%), Positives = 307/633 (48%), Gaps = 55/633 (8%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS- 60
           P    C  + ++  +H  LL  G+      ++ LI +Y  +G L  +  +   F   D+ 
Sbjct: 33  PFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAG 91

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W  LI+ Y  N    + +  +  M     T  N+ +P V +AC  +  +  G+  H 
Sbjct: 92  VYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHA 151

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
                GF  +  +  +++  Y   G L DARKVFD+M   DVVSW+SII SY        
Sbjct: 152 LSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKM 211

Query: 180 GLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L+MF  M  E G  PD +T++++   C  + +    +  HG  +  ++  +  +GN  +
Sbjct: 212 ALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLV 271

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK------ 292
            MY+K G +  A   F  +  +   SW AM++ Y++ G F+ A+  F +M E K      
Sbjct: 272 DMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVV 331

Query: 293 -----------------------------EEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
                                         +PN +TLI+VL  CA +G L  GK +HC  
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391

Query: 324 I-------RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEY 374
           I       + G G E + +   LI+ YA+C K+     +  ++   ER++++W ++I  Y
Sbjct: 392 IKYPMDLRKNGHGDE-NMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGY 450

Query: 375 ARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDC 430
           ++ G + +ALELL +M  +     P++F+++ +L AC ++ +L +G QIH + ++   + 
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNA 510

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
              FV + LIDMY+KCG    A L+F+ + +K+ V W S++ G+  +G   EA+ +F +M
Sbjct: 511 VPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEM 570

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
                ++D VT L  + ACS+ G +++G ++ +     +GV         L D+  + G 
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGR 630

Query: 550 LQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
           L  A R+ + M  E   V W A++ C  +HG++
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVALLSCCRIHGKV 663


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 213/665 (32%), Positives = 373/665 (56%), Gaps = 10/665 (1%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M ++ A      Y  +L++C    +   G+ VH ++++ G + D V+  +++  Y + G 
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 146 LDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
            + AR +F+ M   RD+VSWS++++ + +N+   + +  F  M+  G  P+     ++  
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136

Query: 205 ACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSK-CGDLLSAERTFVKIEKRCT 262
           AC           I+G V++   ++ D  +G   I M+ K  GDL SA + F K+ +R  
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +WT MI+ + + G  + A++ F+ M      P+  T  +VL +C  LG L  GK +H +
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 256

Query: 323 IIRKGMGPEYDYLGPALIEFYAEC---GKMSECEKVIHAIGERNILSWNMLISEYARKG- 378
           +IR G+  +   +G +L++ YA+C   G + +  KV   + E N++SW  +I+ Y + G 
Sbjct: 257 VIRLGLALDV-CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 315

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQS 437
             KEA+EL  +M +  + P+ FS +S L ACGN+     G Q++ + +K+       V +
Sbjct: 316 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN 375

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SLI MY++ G    A   F+ + +K++V +N+++ G+ +N  S EA  LF+++    + +
Sbjct: 376 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 435

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
              TF + +   ++IG + KG+ +H +L+  G + +  I  AL  MY++CG+++ A +VF
Sbjct: 436 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 495

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           + M +RNV+SW++MI  +  HG    A  +F +ML++G KPNE+T++ +L ACSH G + 
Sbjct: 496 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 555

Query: 618 EGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EG+ +FN+M +  G+ P ++HYACMVDLL RSG +  A + I+SMP  A+  +W  LL  
Sbjct: 556 EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 615

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+H   ++ +   + +     +D   Y LLSN++A  G W +  K+R  M+   L K  
Sbjct: 616 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEA 675

Query: 737 GYSTI 741
           G S I
Sbjct: 676 GCSWI 680



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 186/676 (27%), Positives = 335/676 (49%), Gaps = 58/676 (8%)

Query: 3   LFRSCTNLR--KLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEP 58
           L +SC   R  +L +L H  L+ +GL  D      LI  Y++ G   ++RL+F+    + 
Sbjct: 32  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 91

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W+ ++ C+  N+   ++I  +  M+      + + + +V+RACS+      GE ++
Sbjct: 92  DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151

Query: 119 GRIIKCGFDKDDV-IQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           G ++K G+ + DV +   ++  + +  G L  A KVFDKM  R++V+W+ +I  +     
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 211

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             + + +F  M   G  PD  T  S+  AC EL  L   + +H  V+R  + +D  +G S
Sbjct: 212 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 271

Query: 237 FIVMYSKC---GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK-ALESFVKMLEVK 292
            + MY+KC   G +  + + F ++ +    SWTA+I+ Y +SG   K A+E F KM+   
Sbjct: 272 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH 331

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             PN  +  +VL +C  L     G+ V+   ++ G+    + +G +LI  YA  G+M + 
Sbjct: 332 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS-VNCVGNSLISMYARSGRMEDA 390

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            K    + E+N++S+N ++  YA+   S+EA  L  ++   G+   +F+ AS LS   ++
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450

Query: 413 GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           G++  G QIHG ++K   K ++ + ++LI MYS+CG    A+ +F  ++ ++V+ W SMI
Sbjct: 451 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 510

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            GF ++G +  A+ +FH+M     + +E+T++  + ACS++G + +G             
Sbjct: 511 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG------------- 557

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVS----WSAMIDCYGMHGQLNDAAS 586
                                 Q+ F+SM  E  +V     ++ M+D  G  G L +A  
Sbjct: 558 ----------------------QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 595

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLL 645
               M    +  + + +  +L AC   G+ E G+    A  I   EP D   Y  + +L 
Sbjct: 596 FINSM---PLMADALVWRTLLGACRVHGNTELGR--HAAEMILEQEPDDPAAYILLSNLH 650

Query: 646 SRSGDIEGAFKMIHSM 661
           + +G  +   K+  SM
Sbjct: 651 ASAGQWKDVVKIRKSM 666



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 209/409 (51%), Gaps = 10/409 (2%)

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G    A  +   M +    P+L T   +L SC      + GK VH ++++ G+  +   L
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 336 GPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
              LI  Y++CG       +   +G +R+++SW+ ++S +A   M  +A+   + M   G
Sbjct: 65  N-TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSK-CGFKNL 451
             P+ +  A+ + AC N     +G  I+G V+K      D  V   LIDM+ K  G    
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           AY +F+++ ++++V W  MI  F Q G + +AI+LF  M L+    D  T+ + + AC+ 
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC---GDLQTAQRVFDSMSERNVVSW 568
           +G L  GK +H ++I  G+  D+ +  +L DMYAKC   G +  +++VF+ M E NV+SW
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303

Query: 569 SAMIDCYGMHGQLN-DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           +A+I  Y   G+ + +A  LF +M+   I+PN  +F ++L AC +      G+  ++   
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 363

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             G+         ++ + +RSG +E A K    + F  N   + A+++G
Sbjct: 364 KLGIASVNCVGNSLISMYARSGRMEDARKAF-DILFEKNLVSYNAIVDG 411


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 202/596 (33%), Positives = 329/596 (55%), Gaps = 6/596 (1%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           AR VFD++    VV W+ +I +Y  +    + + ++  M++ GV P   T   L +AC  
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI--EKRCTTSWT 266
           L +L+  R IH H     + +D  +  + + MY+KCG L  A+  F  I  + R   +W 
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           AMI+ ++      + + S  +M +    PN  TL+++L +      L +GK++H   IR 
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                   L  AL++ YA+C  +    K+ + + ++N + W+ +I  Y       +AL L
Sbjct: 240 FFFDNV-VLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298

Query: 387 LVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
              M   +GL P   ++A+ L AC  +  L+ G ++H H+IK     D  V +SLI MY+
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG  + A    + +  K  V ++++I G  QNG + +A+ +F QM  + +     T + 
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIA 418

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + ACS++  L+ G   H   +  G   D  I  A+ DMY+KCG +  ++ +FD M  R+
Sbjct: 419 LLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRD 478

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           ++SW+ MI  YG+HG   +A SLF+++   G+KP++VT + +L ACSHSG V EGK++F+
Sbjct: 479 IISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFS 538

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           +M + F ++P + HY CMVDLL+R+G+++ A+  I  MPF  N  IWGALL  CR HK I
Sbjct: 539 SMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNI 598

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++ + + K++ + G    G + L+SNIY+  G WD+   +RSI    G KK PG S
Sbjct: 599 EMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCS 654



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 303/567 (53%), Gaps = 7/567 (1%)

Query: 31  ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           A+T+L   +     ++ +R VFD   +P   +W ++I+ Y W+  F++SI LY  M++  
Sbjct: 43  AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
            T +NF +P +L+ACSSL  L  G  +H      G   D  + T++L  Y + G L  A+
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQ 162

Query: 151 KVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
            +F+ ++   RD+V+W+++IA++  +A  ++ +     M + GV P+  T++S+    G+
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
             +L   ++IH + +R     +  L  + + MY+KC  L  A + F  + K+    W+AM
Sbjct: 223 ANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAM 282

Query: 269 ISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           I  Y        AL  +  ML +    P   TL T+L +CA L  L+ GK +HC +I+ G
Sbjct: 283 IGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG 342

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           M  +   +G +LI  YA+CG M      +  +  ++ +S++ +IS   + G +++AL + 
Sbjct: 343 MDLD-TTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIF 401

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH-VIKIDCKDEFVQSSLIDMYSKC 446
            QMQ+ G+ P   ++ + L AC ++ +LQ G   HG+ V++    D  + +++IDMYSKC
Sbjct: 402 RQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKC 461

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G   ++  +F+R+Q + ++ WN+MI G+  +G  +EA++LF ++    L+ D+VT +  +
Sbjct: 462 GKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVL 521

Query: 507 QACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERN 564
            ACS+ G + +GK W      ++ ++  +     + D+ A+ G+L  A      M    N
Sbjct: 522 SACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPN 581

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQM 591
           V  W A++     H  +     + K++
Sbjct: 582 VRIWGALLAACRTHKNIEMGEQVSKKI 608



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 253/494 (51%), Gaps = 28/494 (5%)

Query: 3   LFRSCTNLR--KLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KE 57
           L ++C++L+  +L RL H H  + GL  D   ST L+  YA+ G L  ++ +F++   ++
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W  +I  + ++    ++I    +M +   T ++    S+L        L  G+ +
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   I+  F  + V+QT++L  Y +   L  ARK+F+ +  ++ V WS++I  Y  +  +
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292

Query: 178 SEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           S+ L ++  M+   G+ P   T+ ++  AC +L  L+  + +H H+++  + +D  +GNS
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY+KCG + +A     ++  + T S++A+IS   ++G+ +KAL  F +M      P 
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           L T+I +L +C+ L  L+ G   H   + +G   +   +  A+I+ Y++CGK++   ++ 
Sbjct: 413 LETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTS-ICNAIIDMYSKCGKITISREIF 471

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG--- 413
             +  R+I+SWN +I  Y   G+  EAL L  ++Q  GL PD  ++ + LSAC + G   
Sbjct: 472 DRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVT 531

Query: 414 -------SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVV 465
                  S+     I   +    C        ++D+ ++ G  + AY   +R+    +V 
Sbjct: 532 EGKYWFSSMSQNFNIKPRMAHYIC--------MVDLLARAGNLDEAYTFIQRMPFVPNVR 583

Query: 466 MWNSMI--CGFYQN 477
           +W +++  C  ++N
Sbjct: 584 IWGALLAACRTHKN 597



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 164/323 (50%), Gaps = 11/323 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       L +   +HA+ +      +    T L++ YA+   L  +R +F+T  + + 
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMI------REQATISNFIYPSVLRACSSLGDLGSG 114
             W+ +I  Y+ ++   +++ LY  M+         AT++     ++LRAC+ L DL  G
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLA-----TMLRACAQLTDLKRG 331

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           +K+H  +IK G D D  +  S++  Y + G +D+A    D+M ++D VS+S+II+    N
Sbjct: 332 KKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQN 391

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
               + L +F  M   G+ P   TM++L  AC  L +L+     HG+ + R    D  + 
Sbjct: 392 GYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC 451

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ I MYSKCG +  +   F +++ R   SW  MI  Y   G   +AL  F ++  +  +
Sbjct: 452 NAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLK 511

Query: 295 PNLITLITVLGSCAGLGWLREGK 317
           P+ +TLI VL +C+  G + EGK
Sbjct: 512 PDDVTLIAVLSACSHSGLVTEGK 534



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 175/350 (50%), Gaps = 7/350 (2%)

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
           D     L  ++    ++     V   I + +++ WNM+I  YA  G  ++++ L + M  
Sbjct: 41  DAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQ 100

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLG--LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKN 450
            G+ P +F+    L AC ++ +LQLG  +  H H++ +   D +V ++L+ MY+KCG   
Sbjct: 101 LGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLS-MDLYVSTALLHMYAKCGHLY 159

Query: 451 LAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            A  LF  I  Q + +V WN+MI  F  +    + I+   QM    +  +  T ++ +  
Sbjct: 160 QAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPT 219

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
                 L +GK +H   I      ++ + TAL DMYAKC  L  A+++F++++++N V W
Sbjct: 220 IGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCW 279

Query: 569 SAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           SAMI  Y +H  ++DA +L+  ML   G+ P   T   +L AC+    ++ GK     M 
Sbjct: 280 SAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMI 339

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
             G++ D      ++ + ++ G ++ A   +  M    +   + A+++GC
Sbjct: 340 KSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGC 388



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 1/144 (0%)

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           T L   +    ++Q A+ VFD + + +VV W+ MI  Y   G    +  L+  ML  G+ 
Sbjct: 45  TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P   TF  +L ACS   +++ G+       I G+  DL     ++ + ++ G +  A  +
Sbjct: 105 PTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTL 164

Query: 658 IHSMPFPANGSI-WGALLNGCRIH 680
            +S+       + W A++     H
Sbjct: 165 FNSISHQDRDIVAWNAMIAAFSFH 188


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 236/750 (31%), Positives = 379/750 (50%), Gaps = 42/750 (5%)

Query: 2   PLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           PLF+ C    +      L  + +  GL +D   +  L+  YA+   +R +R++FD     
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR 186

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D  +W V++K Y+     +E + L+          S F    +   C S+          
Sbjct: 187 DVVLWNVMMKAYVEMGAGDEVLGLF----------SAFHRSGLRPDCVSV---------- 226

Query: 119 GRIIKCGFDKDDVIQTSI--LCTYGE--FGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
            R I  G  K  V +  +  +  Y    F C DD+          DV  W+  ++SY   
Sbjct: 227 -RTILMGVGKKTVFERELEQVRAYATKLFVCDDDS----------DVTVWNKTLSSYLQA 275

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            +  E +  F  M++  V  D +T + +      L  L   + IHG V+R        + 
Sbjct: 276 GEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVA 335

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           NS I MY K G +  A R F ++++    SW  +IS   RSG  + +L  F+ +L     
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395

Query: 295 PNLITLITVLGSCAGLGWLR-EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           P+  T+ +VL +C+ L      G+ VH   ++ G+  +  ++  ALI+ Y++ GKM E E
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLD-SFVSTALIDVYSKGGKMEEAE 454

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            + H     ++ SWN ++  +      +EAL L   M   G   D  + A++  A G + 
Sbjct: 455 LLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLV 514

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            LQ G QIH  VIK+    D FV S ++DMY KCG    A  +F +I     V W ++I 
Sbjct: 515 RLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVIS 574

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G  +NG   +A+  +HQM L  ++ DE TF T ++ACS +  LE+GK +H  ++      
Sbjct: 575 GCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF 634

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D ++ T+L DMYAKCG+++ A  +F  M+ R+V  W+AMI     HG   +A + F +M 
Sbjct: 635 DPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK 694

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
             G+ P+ VTF+ +L ACSHSG   +    F++M + +GVEP+++HY+C+VD LSR+G I
Sbjct: 695 SRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHI 754

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           + A K++ SMPF A+ +++  LLN CR+    +  + + ++L     +D+  Y LLSNIY
Sbjct: 755 QEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIY 814

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A    W+     R++M+   +KK PG+S I
Sbjct: 815 AAANQWENAVSARNMMKRVNVKKEPGFSWI 844



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 181/678 (26%), Positives = 342/678 (50%), Gaps = 43/678 (6%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--FMWAVLIKCYMW 72
           R HA ++ +GL+ D   +  LI  YA+ GSL S+R +FD   + D     +  ++  Y  
Sbjct: 34  RTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAH 93

Query: 73  NNFF---EESILLYH--KMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
                  E++   +H  +++R+   ++       + + C   G   + E + G  +K G 
Sbjct: 94  TGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGL 153

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             D  +  +++  Y +F  + +AR +FD+M  RDVV W+ ++ +Y +     E L +F +
Sbjct: 154 QWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSA 213

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
             R G+ PD V++ ++    G+             V  R+++         +  Y     
Sbjct: 214 FHRSGLRPDCVSVRTILMGVGK-----------KTVFERELEQ--------VRAY----- 249

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
              A + FV  +    T W   +S Y ++G   +A++ F  M++ +   + +T I +L  
Sbjct: 250 ---ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSV 306

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
            A L  L  GK +H  ++R G   ++  +  + I  Y + G ++   ++   + E +++S
Sbjct: 307 VASLNHLELGKQIHGAVVRFGWD-QFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLIS 365

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV-GSLQLGLQIHGHV 425
           WN +IS  AR G+ + +L L + +   GL+PD F++ S L AC ++  S  +G Q+H   
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCA 425

Query: 426 IKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K     D FV ++LID+YSK G    A LLF       +  WN+M+ GF  + N  EA+
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREAL 485

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF  M+    + D++TF  A +A   + +L++GK +H  +I      D+++ + + DMY
Sbjct: 486 RLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY 545

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KCG++++A++VF+ +   + V+W+ +I     +G+   A   + QM  +G++P+E TF 
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605

Query: 605 NILWACSHSGSVEEGK-FYFNAMRIF-GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            ++ ACS   ++E+GK  + N M++    +P +     +VD+ ++ G+IE A+ +   M 
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVDMYAKCGNIEDAYGLFRRMN 663

Query: 663 FPANGSIWGALLNGCRIH 680
              + ++W A++ G   H
Sbjct: 664 -TRSVALWNAMIVGLAQH 680



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 145/589 (24%), Positives = 281/589 (47%), Gaps = 41/589 (6%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMT 157
           S+LR   +  DL  G++ H  I+  G + D  +  +++  Y + G L  ARK+FD    +
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 158 SRDVVSWSSIIASYFDNA---DVSEGLKMFH--SMVREGVEPDFVTMLS-LAEACGELCS 211
            RD+V++++I+A+Y       DV +  + FH   ++R+ V       LS L + C    S
Sbjct: 78  DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGS 137

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
              + ++ G+ ++  ++ D  +  + + +Y+K   +  A   F ++  R    W  M+  
Sbjct: 138 PSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKA 197

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y   G   + L  F         P+ +++ T+L    G+G     K+V            
Sbjct: 198 YVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---MGVG----KKTV------------ 238

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
                  L +  A   K+  C+       + ++  WN  +S Y + G   EA++    M 
Sbjct: 239 ---FERELEQVRAYATKLFVCDD------DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI 289

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFK 449
              +  DS +    LS   ++  L+LG QIHG V++    D+FV   +S I+MY K G  
Sbjct: 290 KSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGW-DQFVSVANSAINMYVKAGSV 348

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           N A  +F ++++  ++ WN++I G  ++G    ++ LF  +  + L  D+ T  + ++AC
Sbjct: 349 NYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC 408

Query: 510 SNIGQLE-KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           S++ +    G+ VH   +  G+  D ++ TAL D+Y+K G ++ A+ +F +    ++ SW
Sbjct: 409 SSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASW 468

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +AM+  + +     +A  LF  M + G K +++TF N   A      +++GK     +  
Sbjct: 469 NAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIK 528

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
                DL   + ++D+  + G+++ A K+ + +P P + + W  +++GC
Sbjct: 529 MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA-WTTVISGC 576



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 12/222 (5%)

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           L+P  FS+     A  +   L LG + H  ++      D +V ++LI MY+KCG    A 
Sbjct: 12  LLPQWFSILRHAIADSD---LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSAR 68

Query: 454 LLFERIQQ--KSVVMWNSMICGFYQNG------NSLEAINLFHQMYLNCLEMDEVTFLTA 505
            LF+   Q  + +V +N+++  +   G       + EA ++F  +  + +     T    
Sbjct: 69  KLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPL 128

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
            + C   G     + +    +  G++ D+++  AL ++YAK   ++ A+ +FD M  R+V
Sbjct: 129 FKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDV 188

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           V W+ M+  Y   G  ++   LF     SG++P+ V+   IL
Sbjct: 189 VLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 388/746 (52%), Gaps = 15/746 (2%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT   +  +   ++  ++  GL  D    T LI+ + +MG L ++R VFD     D
Sbjct: 105 VLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKD 164

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     +    E++ ++ +M  E   +      ++  A S LGD+G  + +HG
Sbjct: 165 GVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHG 224

Query: 120 RIIK---CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
            +++   CG     V+  S++  Y + G +  A++VFD+M  RD VSW++++A Y  N  
Sbjct: 225 YVVRRSICG-----VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGC 279

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             EGL++ H M R  V+ + V +++      E+  L   + I+ + L+  +  D  +   
Sbjct: 280 YFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATP 339

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY+KCG+L  A   F+ +E R   +W+A +S    +G+ ++ L  F  M     +P+
Sbjct: 340 IVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPD 399

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
              L  ++  C  +  +  GK +HC  I+  M  +   +   L+  Y      +    + 
Sbjct: 400 KAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMV-TTLVSMYIRFELFTYAMTLF 458

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           + +  ++I+ WN LI+ + + G    ALE+  ++Q  G++PDS ++    SAC  +  L 
Sbjct: 459 NRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLD 518

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGF 474
           LG  +HG + K   + D  V+ +L+DMY+KCG   ++  L       K  V WN MI G+
Sbjct: 519 LGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGY 578

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
             NG S EAI+ F +M L  +  + VTF+T + A S +  L +    H  +I  G     
Sbjct: 579 LHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCT 638

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            I  +L DMYAKCG L+ +++ F  M  ++ +SW+AM+  Y MHGQ   A +LF  M +S
Sbjct: 639 LIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQES 698

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
            ++ + V+++++L AC HSG ++EG   F +M     VEP ++HYACMVDLL  +G  + 
Sbjct: 699 NVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDE 758

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
              +++ M    +  +WGALL  C+IH  + + +     L      +  ++ +LS+IYA+
Sbjct: 759 VLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQ 818

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYS 739
            G W++  + RS +   GLKK+PGYS
Sbjct: 819 CGRWNDARRTRSHINNHGLKKIPGYS 844



 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 196/649 (30%), Positives = 340/649 (52%), Gaps = 6/649 (0%)

Query: 34  RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           +LI S   +  L      F   K P   ++   IK Y   + F ++I LYH +++     
Sbjct: 38  KLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKP 97

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
             F +  VL+AC+S  D   G  ++  I+  G + D  I TS++  + + GCLD+AR VF
Sbjct: 98  DKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVF 157

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           DKM  +D V W+++I+    + +  E L+MF  M  EG E D V++L+LA A   L  + 
Sbjct: 158 DKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVG 217

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             +SIHG+V+RR I   G + NS I MY KCGD+ SA+R F ++  R   SW  M++ Y 
Sbjct: 218 CCKSIHGYVVRRSIC--GVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYV 275

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++G + + L+   KM     + N + ++  L   A +  L +GK ++   ++ G+  +  
Sbjct: 276 KNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIV 335

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
              P ++  YA+CG++ +  ++  ++  R++++W+  +S     G  +E L +   MQ  
Sbjct: 336 VATP-IVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYE 394

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
           GL PD   ++  +S C  + ++ LG  +H + IK D + +  + ++L+ MY +      A
Sbjct: 395 GLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYA 454

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             LF R+Q K +V+WN++I GF + G+   A+ +F+++ L+ +  D  T +    AC+ +
Sbjct: 455 MTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIM 514

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF-DSMSERNVVSWSAM 571
             L+ G  +H  +   G   DI++  AL DMYAKCG L + +R+F  +   ++ VSW+ M
Sbjct: 515 DDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVM 574

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I  Y  +G  N+A S F++M    ++PN VTF+ IL A S+   + E   +   +   G 
Sbjct: 575 IAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGF 634

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
                    ++D+ ++ G +  + K  H M      S W A+L+   +H
Sbjct: 635 LSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTIS-WNAMLSAYAMH 682



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 13/234 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P     + LR+    H  ++  G          LI+ YA+ G LR S   F   +  D+
Sbjct: 610 LPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDT 669

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  Y  +   E ++ L+  M      + +  Y SVL AC   G +  G  +   
Sbjct: 670 ISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFAS 729

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGC---LDDARKVFDKMTSR-DVVSWSSIIASYFDNAD 176
           +  C     +       C     GC    D+   + +KMT+  D   W +++A+   +++
Sbjct: 730 M--CEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSN 787

Query: 177 VSEGLKMFHSMVREGVEP----DFVTMLSLAEACGELCSLRPARS-IHGHVLRR 225
           V+ G    H +++  +EP      V +  +   CG     R  RS I+ H L++
Sbjct: 788 VTLGEVAVHHLLK--LEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKK 839


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 226/686 (32%), Positives = 365/686 (53%), Gaps = 59/686 (8%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSII 168
           L S E  H +++  G   D    T I+  Y  F     A  V  ++  +S  V  W+ +I
Sbjct: 61  LASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLI 117

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
                   + + L+++  M R G  PD  T   + +ACGE+ S R   S+H  V     +
Sbjct: 118 RRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFE 177

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT---TSWTAMISCYNRSGWFQKALESF 285
            +  +GN  + MY +CG   +A + F ++ +R      SW ++++ Y + G   +A++ F
Sbjct: 178 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 237

Query: 286 VKMLE-VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
            +M E +   P+ ++L+ VL +CA +G    GK VH   +R G+  +  ++G A+++ YA
Sbjct: 238 ERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV-FVGNAVVDMYA 296

Query: 345 ECGKMSECEKVIH-------------------------AIG----------ERNILSWNM 369
           +CG M E  KV                           A+G          E N+++W+ 
Sbjct: 297 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 356

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-- 427
           +I+ YA++G+  EAL++  QM   G  P+  ++ S LS C + G+L  G + H H IK  
Sbjct: 357 VIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWI 416

Query: 428 --IDCKDE----FVQSSLIDMYSKCGFKNLAYLLFERIQQK--SVVMWNSMICGFYQNGN 479
             +D  D      V ++LIDMYSKC     A  +F+ I  K  SVV W  +I G  Q+G 
Sbjct: 417 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476

Query: 480 SLEAINLFHQMYL--NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYI 536
           + EA+ LF QM    N +  +  T   A+ AC+ +G L  G+ +H  ++        +++
Sbjct: 477 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 536

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              L DMY+K GD+  A+ VFD+M +RN VSW++++  YGMHG+  +A  +F +M    +
Sbjct: 537 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXL 596

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            P+ VTF+ +L+ACSHSG V++G  YFN M + FGV P  +HYACMVDLLSR+G ++ A 
Sbjct: 597 VPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAM 656

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           ++I  MP     ++W ALL+ CR++  +++ +    +L    + ++G YTLLSNIYA   
Sbjct: 657 ELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANAR 716

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
            W +  ++R +M+ TG+KK PG S +
Sbjct: 717 CWKDVARIRYLMKNTGIKKRPGCSWV 742



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 197/680 (28%), Positives = 332/680 (48%), Gaps = 95/680 (13%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-- 60
           LF  C +L      H  LLV GL +DP   T +I  Y    S   +  V      P S  
Sbjct: 54  LFHQCKSLASAELTHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRL-HPSSHT 109

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W  LI+  +   F E+ + LY +M R      ++ +P VL+AC  +     G  VH 
Sbjct: 110 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 169

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR---DVVSWSSIIASYFDNAD 176
            +   GF+ +  +   ++  YG  G  ++AR+VFD+M  R   D+VSW+SI+A+Y    D
Sbjct: 170 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 229

Query: 177 VSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
               +KMF  M  + G+ PD V+++++  AC  + +    + +HG+ LR  +  D  +GN
Sbjct: 230 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGN 289

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ---------------- 279
           + + MY+KCG +  A + F +++ +   SW AM++ Y++ G F                 
Sbjct: 290 AVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIEL 349

Query: 280 -------------------KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
                              +AL+ F +ML    EPN++TL+++L  CA  G L  GK  H
Sbjct: 350 NVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETH 409

Query: 321 CQIIRKGMGPEYDYLGP------ALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLIS 372
           C  I+  +  + +  G       ALI+ Y++C        +   I   +R++++W +LI 
Sbjct: 410 CHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIG 469

Query: 373 EYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVGSLQLGLQIHGHVI--KI 428
             A+ G + EALEL  QM      +MP++F+++ +L AC  +G+L+ G QIH +V+  + 
Sbjct: 470 GNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRF 529

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           +    FV + LIDMYSK G  + A ++F+ + Q++ V W S++ G+  +G   EA+ +F+
Sbjct: 530 ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFY 589

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY--GVRKDIYIDTALTDMYAK 546
           +M    L  D VTF+  + ACS+ G +++G       I+Y  G+ KD             
Sbjct: 590 EMQKVXLVPDGVTFVVVLYACSHSGMVDQG-------INYFNGMNKDF------------ 630

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            G +  A+             ++ M+D     G+L++A  L + M    +KP    ++ +
Sbjct: 631 -GVVPGAEH------------YACMVDLLSRAGRLDEAMELIRGM---PMKPTPAVWVAL 674

Query: 607 LWACSHSGSVEEGKFYFNAM 626
           L AC    +VE G++  N +
Sbjct: 675 LSACRVYANVELGEYAANQL 694


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 191/602 (31%), Positives = 338/602 (56%), Gaps = 6/602 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSL 202
           G L +AR++FDKM+ +D +SW+++I+ Y +  D SE L +F +M V  G+  D   +LSL
Sbjct: 63  GHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPF-ILSL 121

Query: 203 A-EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           A +ACG    +     +HG+ ++  +     +G++ + MY+K G +    R F ++  R 
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN 181

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SWTA+I+   R+G+ ++AL  F +M   + E +  T    L +CA  G L  G+ +H 
Sbjct: 182 VVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHA 241

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           Q ++KG      ++   L   Y +CGK+     +   +  R+++SW  +I+   + G  +
Sbjct: 242 QAMKKGFDVS-SFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
            A++  ++M+   + P+ ++ A+ +S C N+  ++ G Q+H  ++ +       V++S++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MY+KCG    + ++F  + ++ +V W+++I G+ Q G+  EA  L   M +   +  E 
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEF 420

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              + + AC N+  LE GK +H  ++S G+     + +AL +MY KCG ++ A R+FD+ 
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAA 480

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              ++VSW+AMI+ Y  HG   +   LF+++   G++P+ VTF+ +L ACSH+G V+ G 
Sbjct: 481 ENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGF 540

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            YFNAM + + + P  +HY CM+DLL R+G +  A  MI +MPF  +  +W  LL  CR+
Sbjct: 541 HYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRV 600

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           H  ++  +   + +     N  G +  L+NIYA +G W E   +R +M+  G+ K PG+S
Sbjct: 601 HGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWS 660

Query: 740 TI 741
            I
Sbjct: 661 WI 662



 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 181/612 (29%), Positives = 305/612 (49%), Gaps = 16/612 (2%)

Query: 7   CTNLRKLTRLHAHLLVTGLHY----DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           C +L+ L R + +L    +H+    D P S + ++   + G L ++R +FD   + D   
Sbjct: 24  CIDLQVLERSNDNL-SQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEIS 82

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W  LI  Y+  N   E++LL+  M  E    I  FI     +AC    D+  GE +HG  
Sbjct: 83  WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYA 142

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K G      + +++L  Y + G + + R+VF +M  R+VVSW++II          E L
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
             F  M R  VE D  T     +AC +  +L   R IH   +++   +   + N+   MY
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KCG L      F K+  R   SWT +I+   + G  + A+++F++M E    PN  T  
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            V+  CA L  +  G+ +H  I+  G+      +  +++  YA+CG+++    + H +  
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLS-VENSIMTMYAKCGQLTSSSVIFHEMTR 381

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+I+SW+ +I+ Y + G   EA ELL  M+  G  P  F++AS LSACGN+  L+ G Q+
Sbjct: 382 RDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL 441

Query: 422 HGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H +V+ I  +    V S+LI+MY KCG    A  +F+  +   +V W +MI G+ ++G S
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTA 539
            E I+LF ++    L  D VTF+  + ACS+ G ++ G  + +     Y +         
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC 561

Query: 540 LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           + D+  + G L  A+ + ++M   R+ V WS ++    +HG +       +++L   ++P
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQ--LEP 619

Query: 599 N----EVTFMNI 606
           N     +T  NI
Sbjct: 620 NCAGTHITLANI 631


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 226/744 (30%), Positives = 377/744 (50%), Gaps = 54/744 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HAH+L + L  D   S RLIE YA+  ++ +SR +FD   + D + W  ++  Y   + 
Sbjct: 27  IHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASE 86

Query: 76  FEESILLYHKMIREQATISNFIYPSVLR--ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            E++ +L+ +M        N +  ++ R  AC +L D+  G + HG  IK G D +  + 
Sbjct: 87  LEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVG 146

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            ++L  Y +  C+ DA + F  +   + VS+++++    D+  V+E  ++F  M+R  + 
Sbjct: 147 NALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIH 206

Query: 194 PDFVTMLSL-----AEACGE---------LCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            D V++ S+        CGE         L S    + +H   ++   + D  L NS + 
Sbjct: 207 VDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLD 266

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K G++ SAE  FV + +    SW  MI+ Y +     KA+E   +M     EP+ IT
Sbjct: 267 MYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEIT 326

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            + +L +C   G +  G+                                    ++   +
Sbjct: 327 YVNMLVACIKSGDIEAGR------------------------------------QMFDGM 350

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              ++ SWN ++S Y++    KEA++L  +MQ   + PD  ++A  LS+   +  L+ G 
Sbjct: 351 SSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGR 410

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+H    K   + D ++ S LI MYSKCG   +A  +F+RI +  +V WNSM+ G   N 
Sbjct: 411 QVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNS 470

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA   F +M    +   + ++ T +  C+ +  L +G+ VH ++   G   D ++ +
Sbjct: 471 LDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 530

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMY+KCGD+  A+ VFD M  +N V+W+ MI  Y  +G  ++A  L++ M+ SG KP
Sbjct: 531 ALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKP 590

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + +TF+ +L ACSHSG V+ G   FN+M+   GVEP + HY C++D L R+G +  A  +
Sbjct: 591 DGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVL 650

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MP   +  IW  LL+ CR++  + + +   +EL      ++  Y LL+NIY+  G W
Sbjct: 651 IDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRW 710

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           D+   VR +M    + K PGYS I
Sbjct: 711 DDAKAVRELMSYNQVVKDPGYSWI 734



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 283/593 (47%), Gaps = 52/593 (8%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+ C       +G+ +H  +++     D  +   ++  Y +   +D +R++FD+M  R
Sbjct: 10  SLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR 69

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP--DFVTMLSLAEACGELCSLRPARS 217
           D+ +W++I+ +Y   +++ +   +F  M    +      ++ L+   ACG L  +   R 
Sbjct: 70  DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRR 129

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
            HG  ++  +  +  +GN+ + MY+KC  +  A + F  + +    S+TAM+     S  
Sbjct: 130 CHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQ 189

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCA--GLGWLR------------EGKSVHCQI 323
             +A   F  ML  +   + ++L +VLG C+  G G                G+ VHC  
Sbjct: 190 VNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLT 249

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I+ G   +  +L  +L++ YA+ G M   E +   + E +++SWN++I+ Y +K  S +A
Sbjct: 250 IKHGFESDL-HLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKA 308

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
           +E L +MQ  G  PD  +  + L AC   G ++ G Q                       
Sbjct: 309 IEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ----------------------- 345

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
                      +F+ +   S+  WN+++ G+ QN N  EA+ LF +M    +  D  T  
Sbjct: 346 -----------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLA 394

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
             + + + +  LE G+ VH        R DIY+ + L  MY+KCG ++ A+R+FD ++E 
Sbjct: 395 IILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAEL 454

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           ++V W++M+    ++    +A + FK+M + G+ P++ ++  +L  C+   S+ +G+   
Sbjct: 455 DIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVH 514

Query: 624 NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           + +   G   D    + ++D+ S+ GD++ A + +  M    N   W  +++G
Sbjct: 515 SQIAREGYMNDAFVGSALIDMYSKCGDVDAA-RWVFDMMLGKNTVTWNEMIHG 566



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 258/562 (45%), Gaps = 52/562 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R H   +  GL  +      L+  YA+   +  +   F    EP+   +  ++     ++
Sbjct: 129 RCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSD 188

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACS--SLGDLG------------SGEKVHGR 120
              E+  L+  M+R +  + +    SVL  CS    G+ G             G++VH  
Sbjct: 189 QVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCL 248

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            IK GF+ D  +  S+L  Y + G +D A  +F  M    VVSW+ +IA Y   +  S+ 
Sbjct: 249 TIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKA 308

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++    M   G EPD +T +++  AC                                  
Sbjct: 309 IEYLQRMQYHGFEPDEITYVNMLVAC---------------------------------- 334

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
             K GD+ +  + F  +     +SW  ++S Y+++   ++A++ F +M      P+  TL
Sbjct: 335 -IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTL 393

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +L S AG+  L  G+ VH  + +K +     YL   LI  Y++CGK+   +++   I 
Sbjct: 394 AIILSSLAGMMLLEGGRQVHA-VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA 452

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E +I+ WN +++  +   + KEA     +M+  G+ P  FS A+ LS C  + SL  G Q
Sbjct: 453 ELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQ 512

Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H  + +     D FV S+LIDMYSKCG  + A  +F+ +  K+ V WN MI G+ QNG 
Sbjct: 513 VHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGC 572

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDT 538
             EA+ L+  M  +  + D +TF+  + ACS+ G ++ G  + + +   +GV   +   T
Sbjct: 573 GDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYT 632

Query: 539 ALTDMYAKCGDLQTAQRVFDSM 560
            + D   + G L  A+ + D M
Sbjct: 633 CIIDSLGRAGRLHEAEVLIDKM 654



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 190/390 (48%), Gaps = 28/390 (7%)

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           E     L ++L +C        GK +H  ++R  +  +  +L   LIEFYA+C  +    
Sbjct: 2   ETKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDD-TFLSNRLIEFYAKCNAIDASR 60

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-----TWGLMPDSFSVASSLSA 408
           ++   + +R+I +WN ++  Y +    ++A  L  +M      +W  +    S  +   A
Sbjct: 61  RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTL---ISALTRNGA 117

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           CG +  ++ G + HG  IKI   +  +V ++L+ MY+KC     A   F  + + + V +
Sbjct: 118 CGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSF 177

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE----------- 516
            +M+ G   +    EA  LF  M  N + +D V+  + +  CS  G  E           
Sbjct: 178 TAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLS 237

Query: 517 ---KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
               G+ VH   I +G   D++++ +L DMYAK G++ +A+ +F +M E +VVSW+ MI 
Sbjct: 238 SDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIA 297

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            YG   Q + A    ++M   G +P+E+T++N+L AC  SG +E G+  F+ M      P
Sbjct: 298 GYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS----SP 353

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            L  +  ++   S++ + + A K+   M F
Sbjct: 354 SLSSWNTILSGYSQNENHKEAVKLFREMQF 383



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 214/468 (45%), Gaps = 41/468 (8%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   +  G   D   +  L++ YA+ G++ S+ ++F    E     W V+I  Y   +
Sbjct: 244 QVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKS 303

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              ++I    +M                             + HG      F+ D++   
Sbjct: 304 QSSKAIEYLQRM-----------------------------QYHG------FEPDEITYV 328

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++L    + G ++  R++FD M+S  + SW++I++ Y  N +  E +K+F  M    V P
Sbjct: 329 NMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHP 388

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T+  +  +   +  L   R +H    +   + D  L +  I MYSKCG +  A+R F
Sbjct: 389 DRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIF 448

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +I +     W +M++  + +   ++A   F KM E    P+  +  TVL  CA L  L 
Sbjct: 449 DRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 508

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH QI R+G   +  ++G ALI+ Y++CG +     V   +  +N ++WN +I  Y
Sbjct: 509 QGRQVHSQIAREGYMNDA-FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGY 567

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
           A+ G   EA+ L   M   G  PD  +  + L+AC + G +  G++I   + +    +  
Sbjct: 568 AQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPL 627

Query: 435 VQ--SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQN 477
           V   + +ID   + G  + A +L +++  K   ++W  ++  C  Y +
Sbjct: 628 VDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYAD 675



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 210/483 (43%), Gaps = 53/483 (10%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +E     + SL + C +  +    + IH H+LR ++  D  L N  I  Y+KC  + ++ 
Sbjct: 1   METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE--VKEEPNLITLITVLGSCAG 309
           R F ++ KR   +W A++  Y ++   + A   F +M E  +     LI+ +T  G+C  
Sbjct: 61  RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGA 120

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L  +  G+  H   I+ G+     Y+G AL+  YA+C  + +  +    + E N +S+  
Sbjct: 121 LVDVECGRRCHGISIKIGLDNNI-YVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTA 179

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           ++   A      EA  L   M    +  DS S++S L  C   G  + GL     V+  D
Sbjct: 180 MMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSD 239

Query: 430 C---------------KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
                            D  + +SL+DMY+K G  + A ++F  + + SVV WN MI G+
Sbjct: 240 VHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGY 299

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            Q   S +AI    +M  +  E DE+T++  + AC                         
Sbjct: 300 GQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC------------------------- 334

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
                      K GD++  +++FD MS  ++ SW+ ++  Y  +    +A  LF++M   
Sbjct: 335 ----------IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFR 384

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            + P+  T   IL + +    +E G+      +      D+   + ++ + S+ G +E A
Sbjct: 385 SVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMA 444

Query: 655 FKM 657
            ++
Sbjct: 445 KRI 447



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 182/398 (45%), Gaps = 10/398 (2%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           +S   +  L R+  H    G   D      ++ +  + G + + R +FD    P    W 
Sbjct: 304 QSSKAIEYLQRMQYH----GFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWN 359

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            ++  Y  N   +E++ L+ +M              +L + + +  L  G +VH    K 
Sbjct: 360 TILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKA 419

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
            F  D  + + ++  Y + G ++ A+++FD++   D+V W+S++A    N+   E    F
Sbjct: 420 VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFF 479

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M  +G+ P   +  ++   C +L SL   R +H  + R     D  +G++ I MYSKC
Sbjct: 480 KKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKC 539

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           GD+ +A   F  +  + T +W  MI  Y ++G   +A+  +  M+   E+P+ IT + VL
Sbjct: 540 GDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVL 599

Query: 305 GSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ER 362
            +C+  G +  G  +   + ++ G+ P  D+    +I+     G++ E E +I  +  + 
Sbjct: 600 TACSHSGLVDTGIKIFNSMQQEHGVEPLVDHY-TCIIDSLGRAGRLHEAEVLIDKMPCKY 658

Query: 363 NILSWNMLISE---YARKGMSKEALELLVQMQTWGLMP 397
           + + W +L+S    YA   +++ A E L  +      P
Sbjct: 659 DPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAP 696


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 214/733 (29%), Positives = 372/733 (50%), Gaps = 4/733 (0%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           RS +  R+  ++H  +  +GL  D   ST ++  Y   G +  SR VF+   + +   W 
Sbjct: 70  RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            L+  Y      EE I +Y  M  E    +      V+ +C  L D   G ++ G+++K 
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 189

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G +    ++ S++   G  G +D A  +FD+M+ RD +SW+SI A+Y  N  + E  ++F
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M R   E +  T+ +L    G +   +  R IHG V++        + N+ + MY+  
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G  + A   F ++  +   SW ++++ +   G    AL     M+   +  N +T  + L
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C    +  +G+ +H  ++  G+      +G AL+  Y + G+MSE  +V+  +  R++
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYN-QIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 428

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHG 423
           ++WN LI  YA      +AL     M+  G+  +  +V S LSAC   G L + G  +H 
Sbjct: 429 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 488

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +++    + DE V++SLI MY+KCG  + +  LF  +  ++++ WN+M+     +G+  E
Sbjct: 489 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 548

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            + L  +M    + +D+ +F   + A + +  LE+G+ +H   +  G   D +I  A  D
Sbjct: 549 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 608

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG++    ++      R++ SW+ +I   G HG   +  + F +ML+ GIKP  VT
Sbjct: 609 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 668

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L ACSH G V++G  Y++ + R FG+EP ++H  C++DLL RSG +  A   I  M
Sbjct: 669 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 728

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   N  +W +LL  C+IH  +D  +   + LS     D+  Y L SN++A  G W++  
Sbjct: 729 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 788

Query: 722 KVRSIMEVTGLKK 734
            VR  M    +KK
Sbjct: 789 NVRKQMGFKNIKK 801



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 171/647 (26%), Positives = 319/647 (49%), Gaps = 9/647 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y + G ++ +R +FD     +   W  ++   +    + E +  + KM       S+F+ 
Sbjct: 2   YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61

Query: 99  PSVLRACSSLGDL-GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
            S++ AC   G +   G +VHG + K G   D  + T+IL  YG +G +  +RKVF++M 
Sbjct: 62  ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+VVSW+S++  Y D  +  E + ++  M  EGV  +  +M  +  +CG L      R 
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           I G V++  ++    + NS I M    G++  A   F ++ +R T SW ++ + Y ++G 
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +++   F  M    +E N  T+ T+L     +   + G+ +H  +++ G       +  
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF-DSVVCVCN 300

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L+  YA  G+  E   V   +  ++++SWN L++ +   G S +AL LL  M + G   
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  +  S+L+AC      + G  +HG V+      ++ + ++L+ MY K G  + +  + 
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ-L 515
            ++ ++ VV WN++I G+ ++ +  +A+  F  M +  +  + +T ++ + AC   G  L
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E+GK +H  ++S G   D ++  +L  MYAKCGDL ++Q +F+ +  RN+++W+AM+   
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 540

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
             HG   +   L  +M   G+  ++ +F   L A +    +EEG+         G E D 
Sbjct: 541 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI--WGALLNGCRIH 680
             +    D+ S+ G+I    KM   +P   N S+  W  L++    H
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKM---LPPSVNRSLPSWNILISALGRH 644



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 272/556 (48%), Gaps = 6/556 (1%)

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           Y +FG +  AR +FD M  R+ VSW+++++         EG++ F  M   G++P    +
Sbjct: 2   YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61

Query: 200 LSLAEACGELCSL-RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
            SL  ACG   S+ R    +HG V +  +  D  +  + + +Y   G +  + + F ++ 
Sbjct: 62  ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
            R   SWT+++  Y+  G  ++ ++ +  M       N  ++  V+ SC  L     G+ 
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +  Q+++ G+  +   +  +LI      G +     +   + ER+ +SWN + + YA+ G
Sbjct: 182 IIGQVVKSGLESKL-AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQS 437
             +E+  +   M+ +    +S +V++ LS  G+V   + G  IHG V+K+       V +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           +L+ MY+  G    A L+F+++  K ++ WNS++  F  +G SL+A+ L   M  +   +
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           + VTF +A+ AC      EKG+ +H  ++  G+  +  I  AL  MY K G++  ++RV 
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS-V 616
             M  R+VV+W+A+I  Y      + A + F+ M   G+  N +T +++L AC   G  +
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480

Query: 617 EEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           E GK     +   G E D      ++ + ++ GD+  +  + + +    N   W A+L  
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 539

Query: 677 CRIHKR-IDVMKTIEK 691
              H    +V+K + K
Sbjct: 540 NAHHGHGEEVLKLVSK 555



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 231/475 (48%), Gaps = 5/475 (1%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K G +  A   F  +  R   SW  M+S   R G + + +E F KM ++  +P+   
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 300 LITVLGSCAGLGWL-REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           + +++ +C   G + REG  VH  + + G+  +  Y+  A++  Y   G +S   KV   
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV-YVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + +RN++SW  L+  Y+ KG  +E +++   M+  G+  +  S++  +S+CG +    LG
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            QI G V+K   + +  V++SLI M    G  + A  +F+++ ++  + WNS+   + QN
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G+  E+  +F  M     E++  T  T +    ++   + G+ +H  ++  G    + + 
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
             L  MYA  G    A  VF  M  ++++SW++++  +   G+  DA  L   M+ SG  
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            N VTF + L AC      E+G+     + + G+  +      +V +  + G++  + ++
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
           +  MP   +   W AL+ G    +  D      + + V G + N Y T++S + A
Sbjct: 420 LLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN-YITVVSVLSA 472


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 224/687 (32%), Positives = 380/687 (55%), Gaps = 12/687 (1%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQ-ATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W + IK    N  ++E +  YH++ +    T+   ++P +L+A S L     G+ +H  +
Sbjct: 15  WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHR-HGKSLHACL 73

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEG 180
           IK GFD    I  SI+  Y   G  D A  VF+ M  SRD VSW+ +I  + DN  +  G
Sbjct: 74  IKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAG 133

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  F +    G EP+  TM+ + +AC  L +      +HG++++        + NS + M
Sbjct: 134 LWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSM 193

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
           Y    D+  A   F ++ ++   +W+ MI  Y +    Q  L+ F KM+ V   EP+ + 
Sbjct: 194 YVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVV 252

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +++VL +CA    +  G+ VH  +I +G   +  ++  +LI+ Y++C       KV + I
Sbjct: 253 MVSVLKACASSRDVCTGRLVHGLVIHRGFDCDL-FVENSLIDMYSKCKDAGSAFKVFNEI 311

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +RN +SWN ++S +       EA  L+  M+   +  D  ++ + L  C          
Sbjct: 312 SQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCK 371

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH  +I+   + +E V S+LID Y+KC    +A+ +F R++++ VV W++MI GF   G
Sbjct: 372 SIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCG 431

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EAI ++ +M  + ++ + +T +  ++ACS   +L++ KW H   I  G   ++ + T
Sbjct: 432 KPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGT 491

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           A+ DMY+KCG++  ++R FD ++ +N+V+WSAMI  YGM+G  ++A +LF +M   G+KP
Sbjct: 492 AVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKP 551

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N VT +++L ACSH G VEEG   F +M +  G+EP  +HY+CMVD+L R+G ++ A ++
Sbjct: 552 NPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEV 611

Query: 658 IHSMP--FPANGSIWGALLNGCRIHKRIDVMK-TIEKELSVTGTNDNGYYTLLSNIYAEE 714
           I +MP       SIWG+LL+ CR +   ++ K  I + L +  +N  GY  + S++YA +
Sbjct: 612 IKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYL-VASSMYAAD 670

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G WD+  ++R + +  G+K V GYS +
Sbjct: 671 GLWDDAARIRVLAKEKGVKVVAGYSLV 697



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 229/435 (52%), Gaps = 5/435 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH +L+ +G          L+  Y +   +  +R +FD   E D   W+V+I  Y+    
Sbjct: 171 LHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEE 229

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            +  + ++ KM+       +  +  SVL+AC+S  D+ +G  VHG +I  GFD D  ++ 
Sbjct: 230 PQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVEN 289

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y +      A KVF++++ R+ VSW+S+++ +  N + SE   +  SM +E VE 
Sbjct: 290 SLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVET 349

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D VT++++ + C         +SIH  ++RR  + +  + ++ I  Y+KC  +  A   F
Sbjct: 350 DEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVF 409

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R   SW+ MIS +   G   +A+  + +M     +PN+IT+I +L +C+    L+
Sbjct: 410 ARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELK 469

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
             K  H   IR+G   E   +G A+++ Y++CG++    +    +  +NI++W+ +I+ Y
Sbjct: 470 RSKWAHGVAIRQGFASEVT-VGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAY 528

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDE 433
              G++ EAL L  +M+  GL P+  +  S L+AC + G ++ GL +   +++ +  +  
Sbjct: 529 GMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPG 588

Query: 434 FVQ-SSLIDMYSKCG 447
           F   S ++DM  + G
Sbjct: 589 FEHYSCMVDMLGRAG 603



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 4/158 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+   +L R    H   +  G   +    T +++ Y++ G + +SR  FD     +
Sbjct: 458 LLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKN 517

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y  N    E++ L+ +M R     +     SVL ACS  G +  G  +  
Sbjct: 518 IVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFK 577

Query: 120 RIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
            +++  G +      + ++   G  G LD A +V   M
Sbjct: 578 SMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAM 615


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 366/698 (52%), Gaps = 4/698 (0%)

Query: 47  SSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS 106
           S   VFD   +  +F W  +I  Y+ N     ++ LY  M  E   +    +P++L+AC+
Sbjct: 97  SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWS 165
            L D+ SG ++H  ++K G+     I  +++  Y +   L  AR++FD    + D V W+
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216

Query: 166 SIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           SI++SY  +    E L++F  M   G  P+  T++S   AC      +  + IH  VL+ 
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276

Query: 226 KI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
                +  + N+ I MY++CG +  AER   ++      +W ++I  Y ++  +++ALE 
Sbjct: 277 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 336

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F  M+    + + +++ +++ +   L  L  G  +H  +I+ G       +G  LI+ Y+
Sbjct: 337 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ-VGNTLIDMYS 395

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +C       +    + +++++SW  +I+ YA+     EALEL   +    +  D   + S
Sbjct: 396 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 455

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
            L A   + S+ +  +IH H+++    D  +Q+ L+D+Y KC     A  +FE I+ K V
Sbjct: 456 ILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 515

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V W SMI     NGN  EA+ LF +M    L  D V  L  + A +++  L KG+ +H  
Sbjct: 516 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 575

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
           L+  G   +  I  A+ DMYA CGDLQ+A+ VFD +  + ++ +++MI+ YGMHG    A
Sbjct: 576 LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAA 635

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVD 643
             LF +M    + P+ ++F+ +L+ACSH+G ++EG+ +   M   + +EP  +HY C+VD
Sbjct: 636 VELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVD 695

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY 703
           +L R+  +  AF+ +  M       +W ALL  CR H   ++ +   + L      + G 
Sbjct: 696 MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 755

Query: 704 YTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             L+SN++AE+G W++  KVR+ M+ +G++K PG S I
Sbjct: 756 LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 793



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 270/523 (51%), Gaps = 8/523 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C  LR +   + LH+ L+  G H        L+  YA+   L ++R +FD F+E  
Sbjct: 151 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 210

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D+ +W  ++  Y  +    E++ L+ +M       +++   S L AC        G+++H
Sbjct: 211 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 270

Query: 119 GRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
             ++K      ++ +  +++  Y   G +  A ++  +M + DVV+W+S+I  Y  N   
Sbjct: 271 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 330

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L+ F  M+  G + D V+M S+  A G L +L     +H +V++     +  +GN+ 
Sbjct: 331 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 390

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKC       R F+++  +   SWT +I+ Y ++    +ALE F  + + + E + 
Sbjct: 391 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 450

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           + L ++L + + L  +   K +HC I+RKG+      +   L++ Y +C  M    +V  
Sbjct: 451 MILGSILRASSVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFE 508

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +I  ++++SW  +IS  A  G   EA+EL  +M   GL  DS ++   LSA  ++ +L  
Sbjct: 509 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 568

Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH ++++   C +  +  +++DMY+ CG    A  +F+RI++K ++ + SMI  +  
Sbjct: 569 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 628

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           +G    A+ LF +M    +  D ++FL  + ACS+ G L++G+
Sbjct: 629 HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 671



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 206/418 (49%), Gaps = 6/418 (1%)

Query: 16  LHAHLLVTGLHYDPP-ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +HA +L +  H         LI  Y   G +  +  +       D   W  LIK Y+ N 
Sbjct: 269 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 328

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            ++E++  +  MI            S++ A   L +L +G ++H  +IK G+D +  +  
Sbjct: 329 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 388

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y +        + F +M  +D++SW+++IA Y  N    E L++F  + ++ +E 
Sbjct: 389 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 448

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D + + S+  A   L S+   + IH H+LR+ + +D  + N  + +Y KC ++  A R F
Sbjct: 449 DEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVF 507

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             I+ +   SWT+MIS    +G   +A+E F +M+E     + + L+ +L + A L  L 
Sbjct: 508 ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALN 567

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ +HC ++RKG   E   +  A+++ YA CG +   + V   I  + +L +  +I+ Y
Sbjct: 568 KGREIHCYLLRKGFCLE-GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 626

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKID 429
              G  K A+EL  +M+   + PD  S  + L AC + G L  G   L+I  H  +++
Sbjct: 627 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELE 684



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 185/381 (48%), Gaps = 6/381 (1%)

Query: 236 SFIVMYSKCGD--LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           +F  +   CG    +S E+ F ++  R   +W  MI  Y  +G    AL  +  M     
Sbjct: 82  AFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV 141

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
              L +   +L +CA L  +R G  +H  +++ G      ++  AL+  YA+   +S   
Sbjct: 142 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST-GFIVNALVSMYAKNDDLSAAR 200

Query: 354 KVIHAIGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
           ++     E+ + + WN ++S Y+  G S E LEL  +M   G  P+S+++ S+L+AC   
Sbjct: 201 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 260

Query: 413 GSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
              +LG +IH  V+K      + +V ++LI MY++CG    A  +  ++    VV WNS+
Sbjct: 261 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 320

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I G+ QN    EA+  F  M     + DEV+  + I A   +  L  G  +H  +I +G 
Sbjct: 321 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 380

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             ++ +   L DMY+KC       R F  M +++++SW+ +I  Y  +    +A  LF+ 
Sbjct: 381 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 440

Query: 591 MLDSGIKPNEVTFMNILWACS 611
           +    ++ +E+   +IL A S
Sbjct: 441 VAKKRMEIDEMILGSILRASS 461


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 214/733 (29%), Positives = 372/733 (50%), Gaps = 4/733 (0%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           RS +  R+  ++H  +  +GL  D   ST ++  Y   G +  SR VF+   + +   W 
Sbjct: 53  RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 112

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            L+  Y      EE I +Y  M  E    +      V+ +C  L D   G ++ G+++K 
Sbjct: 113 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 172

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G +    ++ S++   G  G +D A  +FD+M+ RD +SW+SI A+Y  N  + E  ++F
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M R   E +  T+ +L    G +   +  R IHG V++        + N+ + MY+  
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G  + A   F ++  +   SW ++++ +   G    AL     M+   +  N +T  + L
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C    +  +G+ +H  ++  G+      +G AL+  Y + G+MSE  +V+  +  R++
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYN-QIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHG 423
           ++WN LI  YA      +AL     M+  G+  +  +V S LSAC   G L + G  +H 
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 471

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +++    + DE V++SLI MY+KCG  + +  LF  +  ++++ WN+M+     +G+  E
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 531

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            + L  +M    + +D+ +F   + A + +  LE+G+ +H   +  G   D +I  A  D
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 591

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG++    ++      R++ SW+ +I   G HG   +  + F +ML+ GIKP  VT
Sbjct: 592 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 651

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L ACSH G V++G  Y++ + R FG+EP ++H  C++DLL RSG +  A   I  M
Sbjct: 652 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 711

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   N  +W +LL  C+IH  +D  +   + LS     D+  Y L SN++A  G W++  
Sbjct: 712 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 771

Query: 722 KVRSIMEVTGLKK 734
            VR  M    +KK
Sbjct: 772 NVRKQMGFKNIKK 784



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 308/623 (49%), Gaps = 9/623 (1%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL-GSGEKVHGRI 121
           W  ++   +    + E +  + KM       S+F+  S++ AC   G +   G +VHG +
Sbjct: 9   WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            K G   D  + T+IL  YG +G +  +RKVF++M  R+VVSW+S++  Y D  +  E +
Sbjct: 69  AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            ++  M  EGV  +  +M  +  +CG L      R I G V++  ++    + NS I M 
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
              G++  A   F ++ +R T SW ++ + Y ++G  +++   F  M    +E N  T+ 
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           T+L     +   + G+ +H  +++ G       +   L+  YA  G+  E   V   +  
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGF-DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 307

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++++SWN L++ +   G S +AL LL  M + G   +  +  S+L+AC      + G  +
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367

Query: 422 HGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           HG V+      ++ + ++L+ MY K G  + +  +  ++ ++ VV WN++I G+ ++ + 
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 427

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ-LEKGKWVHHKLISYGVRKDIYIDTA 539
            +A+  F  M +  +  + +T ++ + AC   G  LE+GK +H  ++S G   D ++  +
Sbjct: 428 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNS 487

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L  MYAKCGDL ++Q +F+ +  RN+++W+AM+     HG   +   L  +M   G+  +
Sbjct: 488 LITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 547

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           + +F   L A +    +EEG+         G E D   +    D+ S+ G+I    KM  
Sbjct: 548 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM-- 605

Query: 660 SMPFPANGSI--WGALLNGCRIH 680
            +P   N S+  W  L++    H
Sbjct: 606 -LPPSVNRSLPSWNILISALGRH 627



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 262/540 (48%), Gaps = 6/540 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL-RP 214
           M  R+ VSW+++++         EG++ F  M   G++P    + SL  ACG   S+ R 
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              +HG V +  +  D  +  + + +Y   G +  + + F ++  R   SWT+++  Y+ 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G  ++ ++ +  M       N  ++  V+ SC  L     G+ +  Q+++ G+  +   
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL-A 179

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +LI      G +     +   + ER+ +SWN + + YA+ G  +E+  +   M+ + 
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAY 453
              +S +V++ LS  G+V   + G  IHG V+K+       V ++L+ MY+  G    A 
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           L+F+++  K ++ WNS++  F  +G SL+A+ L   M  +   ++ VTF +A+ AC    
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
             EKG+ +H  ++  G+  +  I  AL  MY K G++  ++RV   M  R+VV+W+A+I 
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS-VEEGKFYFNAMRIFGVE 632
            Y      + A + F+ M   G+  N +T +++L AC   G  +E GK     +   G E
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEK 691
            D      ++ + ++ GD+  +  + + +    N   W A+L     H    +V+K + K
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 538



 Score = 43.1 bits (100), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV-EE 618
           M  RN VSW+ M+      G   +    F++M D GIKP+     +++ AC  SGS+  E
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-- 676
           G      +   G+  D+     ++ L    G +  + K+   MP   N   W +L+ G  
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYS 119

Query: 677 --CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
                 + ID+ K +  E    G N+N    ++S+
Sbjct: 120 DKGEPEEVIDIYKGMRGE--GVGCNENSMSLVISS 152


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 224/687 (32%), Positives = 380/687 (55%), Gaps = 12/687 (1%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQ-ATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W + IK    N  ++E +  YH++ +    T+   ++P +L+A S L     G+ +H  +
Sbjct: 15  WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHR-HGKSLHACL 73

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEG 180
           IK GFD    I  SI+  Y   G  D A  VF+ M  SRD VSW+ +I  + DN  +  G
Sbjct: 74  IKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAG 133

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  F +    G EP+  TM+ + +AC  L +      +HG++++        + NS + M
Sbjct: 134 LWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSM 193

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
           Y    D+  A   F ++ ++   +W+ MI  Y +    Q  L+ F KM+ V   EP+ + 
Sbjct: 194 YVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVV 252

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +++VL +CA    +  G+ VH  +I +G   +  ++  +LI+ Y++C       KV + I
Sbjct: 253 MVSVLKACASSRDVCTGRLVHGLVIHRGFDCDL-FVENSLIDMYSKCKDAGSAFKVFNEI 311

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +RN +SWN ++S +       EA  L+  M+   +  D  ++ + L  C          
Sbjct: 312 SQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCK 371

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH  +I+   + +E V S+LID Y+KC    +A+ +F R++++ VV W++MI GF   G
Sbjct: 372 SIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCG 431

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EAI ++ +M  + ++ + +T +  ++ACS   +L++ KW H   I  G   ++ + T
Sbjct: 432 KPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGT 491

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           A+ DMY+KCG++  ++R FD ++ +N+V+WSAMI  YGM+G  ++A +LF +M   G+KP
Sbjct: 492 AVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKP 551

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N VT +++L ACSH G VEEG   F +M +  G+EP  +HY+CMVD+L R+G ++ A ++
Sbjct: 552 NPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEV 611

Query: 658 IHSMP--FPANGSIWGALLNGCRIHKRIDVMK-TIEKELSVTGTNDNGYYTLLSNIYAEE 714
           I +MP       SIWG+LL+ CR +   ++ K  I + L +  +N  GY  + S++YA +
Sbjct: 612 IKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYL-VASSMYAAD 670

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G WD+  ++R + +  G+K V GYS +
Sbjct: 671 GLWDDAARIRVLAKEKGVKVVAGYSLV 697



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 229/435 (52%), Gaps = 5/435 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH +L+ +G          L+  Y +   +  +R +FD   E D   W+V+I  Y+    
Sbjct: 171 LHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEE 229

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            +  + ++ KM+       +  +  SVL+AC+S  D+ +G  VHG +I  GFD D  ++ 
Sbjct: 230 PQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVEN 289

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y +      A KVF++++ R+ VSW+S+++ +  N + SE   +  SM +E VE 
Sbjct: 290 SLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVET 349

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D VT++++ + C         +SIH  ++RR  + +  + ++ I  Y+KC  +  A   F
Sbjct: 350 DEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVF 409

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ +R   SW+ MIS +   G   +A+  + +M     +PN+IT+I +L +C+    L+
Sbjct: 410 ARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELK 469

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
             K  H   IR+G   E   +G A+++ Y++CG++    +    +  +NI++W+ +I+ Y
Sbjct: 470 RSKWAHGVAIRQGFASEVT-VGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAY 528

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDE 433
              G++ EAL L  +M+  GL P+  +  S L+AC + G ++ GL +   +++ +  +  
Sbjct: 529 GMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPG 588

Query: 434 FVQ-SSLIDMYSKCG 447
           F   S ++DM  + G
Sbjct: 589 FEHYSCMVDMLGRAG 603



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 4/158 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+   +L R    H   +  G   +    T +++ Y++ G + +SR  FD     +
Sbjct: 458 LLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKN 517

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y  N    E++ L+ +M R     +     SVL ACS  G +  G  +  
Sbjct: 518 IVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFK 577

Query: 120 RIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
            +++  G +      + ++   G  G LD A +V   M
Sbjct: 578 SMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAM 615


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 220/719 (30%), Positives = 369/719 (51%), Gaps = 7/719 (0%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D  A   +I +Y  +G L  +R +F     P+   W V+I  +    F EE+I  + ++ 
Sbjct: 242 DQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           +     +     SVL A +SL  L  G  VH + IK G D +  + ++++  Y +   +D
Sbjct: 302 KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMD 361

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
            A++VF+ +  R++V W++++  +  N    E ++ F  M R G +PD  T  S+  AC 
Sbjct: 362 AAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACA 421

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            L  L     +H  +++ K   +  + N+ + MY+K G L  A + F  ++     SW A
Sbjct: 422 SLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNA 481

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I  Y +  +  +A   F +M+     P+ ++L +++ +CA +   ++G+  HC +++ G
Sbjct: 482 IIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVG 541

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +       G +LI+ Y +CG +     V +++  RN++S N LI+ Y    + +EA+ L 
Sbjct: 542 LDTS-TCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL-EEAIHLF 599

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSK 445
            ++Q  GL P   + A  L  C     L LG QIHG V+K       E V  SL+ MY  
Sbjct: 600 QEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMN 659

Query: 446 CGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
                 +  LF  +Q  K +V+W ++I G+ Q  +  +A+  +  M  + +  D+ TF +
Sbjct: 660 SQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFAS 719

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            ++AC+ +  L+ G+ VH  +   G   D    ++L DMYAKCGD++ + +VF  M  RN
Sbjct: 720 VLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRN 779

Query: 565 -VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
            V+SW++MI     +G   +A  +FKQM    I P+EVTF+ +L ACSH+G V EG+  F
Sbjct: 780 SVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVF 839

Query: 624 NAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           + M   + ++P + H  CMVD+L R G +  A + I+ +   A+  +W  LL  CR H  
Sbjct: 840 DLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGD 899

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               K    +L       +  Y LLS +YAE  NW     +R  M++ G+KK+PGYS I
Sbjct: 900 EVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWI 958



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 192/666 (28%), Positives = 322/666 (48%), Gaps = 45/666 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+  L  G+         +++ Y + G++  ++  F   ++ D F W  ++  Y+ +  
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F   +  +  M       + F +  VL ACS L D+  G++VH  + K GF      Q  
Sbjct: 123 FATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGG 182

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +   L DAR VFD   + D VSW+++IA Y  +    E +K+F  M R G  PD
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPD 242

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            + ++++  A                                   Y   G L  A + F 
Sbjct: 243 QIALVTVINA-----------------------------------YVALGRLADARKLFT 267

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +I      +W  MIS + + G+ ++A+  F+++ +   +    +L +VL + A L  L  
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  VH Q I++G+     Y+G AL+  YA+C KM   ++V +++GERNI+ WN ++  +A
Sbjct: 328 GSMVHAQAIKEGLDDNV-YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFA 386

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEF 434
           + G+++E +E    M+  G  PD F+  S  SAC ++  L  G Q+H  +IK     + F
Sbjct: 387 QNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLF 446

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V ++L+DMY+K G    A   FE ++    V WN++I G+ Q   + EA  +F +M  N 
Sbjct: 447 VANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNG 506

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  DEV+  + + AC+N+ + ++G+  H  L+  G+       ++L DMY KCG +  A+
Sbjct: 507 VLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAAR 566

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            VF SM  RNVVS +A+I  Y M   L +A  LF+++   G+KP EVTF  +L  C  + 
Sbjct: 567 DVFYSMPYRNVVSINALIAGYTM-SHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAF 625

Query: 615 SVEEGKFYFNAMRIFGV----EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
            +  G+     +  +G     E       CM     R  D E  F     + +P    +W
Sbjct: 626 MLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFS---ELQYPKGLVVW 682

Query: 671 GALLNG 676
            AL++G
Sbjct: 683 TALISG 688



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 284/569 (49%), Gaps = 6/569 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA  +  GL  +    + L+  YA+   + +++ VF++  E +  +W  ++  +  N  
Sbjct: 331 VHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL 390

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E +  +  M R       F + S+  AC+SL  L  G ++H  +IK  F  +  +  +
Sbjct: 391 AQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANA 450

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L +ARK F+ M   D VSW++II  Y       E   MF  MV  GV PD
Sbjct: 451 LVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            V++ S+  AC  +   +  +  H  +++  +      G+S I MY KCG +L+A   F 
Sbjct: 511 EVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   S  A+I+ Y  S   ++A+  F ++  V  +P  +T   +L  C G   L  
Sbjct: 571 SMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEY 374
           G+ +H Q+++ G     + +  +L+  Y    + ++ E +   +   + ++ W  LIS Y
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGY 689

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
           A++   ++AL+    M++  ++PD  + AS L AC  + SLQ G ++H  +       DE
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDE 749

Query: 434 FVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              SSLIDMY+KCG  K    +  E  ++ SV+ WNSMI G  +NG + EA+ +F QM  
Sbjct: 750 ITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQ 809

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQ 551
             +  DEVTFL  + ACS+ G++ +G+ V   ++ +Y ++  +     + D+  + G L 
Sbjct: 810 QSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLN 869

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHG 579
            A+   + +  + + + WS ++     HG
Sbjct: 870 EAEEFINKLGCKADPMLWSTLLGACRKHG 898



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/700 (24%), Positives = 329/700 (47%), Gaps = 47/700 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C+ L+ +    ++H  +   G  +       LI+ YA+  +LR +RLVFD     D
Sbjct: 148 VLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLD 207

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  LI  Y+ + F  E++ ++ KM R                               
Sbjct: 208 TVSWTTLIAGYVRDGFPMEAVKVFDKMQR------------------------------- 236

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
                G   D +   +++  Y   G L DARK+F ++ + +VV+W+ +I+ +       E
Sbjct: 237 ----VGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  + + G++    ++ S+  A   L  L     +H   ++  +  +  +G++ + 
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVN 352

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KC  + +A++ F  + +R    W AM+  + ++G  Q+ +E F  M     +P+  T
Sbjct: 353 MYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFT 412

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++  +CA L +L  G  +H  +I+        ++  AL++ YA+ G + E  K    +
Sbjct: 413 FTSIFSACASLHYLDFGGQLHTVMIKNKFTSNL-FVANALVDMYAKSGALKEARKQFEFM 471

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              + +SWN +I  Y ++  + EA  +  +M + G++PD  S+AS +SAC NV   + G 
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQ 531

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H  ++K+         SSLIDMY KCG    A  +F  +  ++VV  N++I G Y   
Sbjct: 532 QCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAG-YTMS 590

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYID 537
           +  EAI+LF ++ +  L+  EVTF   +  C     L  G+ +H +++ +G +     + 
Sbjct: 591 HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +L  MY        ++ +F  +   + +V W+A+I  Y        A   ++ M    I
Sbjct: 651 VSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNI 710

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            P++ TF ++L AC+   S++ G+   + +   G   D    + ++D+ ++ GD++G+ +
Sbjct: 711 LPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQ 770

Query: 657 MIHSMPFPANGSIWGALLNGCR----IHKRIDVMKTIEKE 692
           + H MP   +   W +++ G        + +++ K +E++
Sbjct: 771 VFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQ 810



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 279/557 (50%), Gaps = 37/557 (6%)

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           L  L + + +H + +K G     ++   I+  Y + G +D A+K F ++  +DV +W+S+
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           ++ Y D+   +  ++ F  M   GV P+  T   +  AC  L  +   + +H  V +   
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGF 173

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
                     I MY+KC +L  A   F       T SWT +I+ Y R G+  +A++ F K
Sbjct: 174 GFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDK 233

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M  V   P+ I L+TV+ +   LG                                    
Sbjct: 234 MQRVGHVPDQIALVTVINAYVALG------------------------------------ 257

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
           ++++  K+   I   N+++WN++IS +A++G ++EA+   ++++  GL     S+ S LS
Sbjct: 258 RLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLS 317

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           A  ++  L  G  +H   IK    D  +V S+L++MY+KC   + A  +F  + ++++V+
Sbjct: 318 AIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVL 377

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WN+M+ GF QNG + E +  F  M  +  + DE TF +   AC+++  L+ G  +H  +I
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMI 437

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
                 ++++  AL DMYAK G L+ A++ F+ M   + VSW+A+I  Y      ++A  
Sbjct: 438 KNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFF 497

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
           +F++M+ +G+ P+EV+  +I+ AC++    ++G+     +   G++      + ++D+  
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYV 557

Query: 647 RSGDIEGAFKMIHSMPF 663
           + G +  A  + +SMP+
Sbjct: 558 KCGVVLAARDVFYSMPY 574



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 224/468 (47%), Gaps = 36/468 (7%)

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           L +L  A+ IH   L+  + + G LGN  + +Y KCG++  A++ F ++EK+   +W ++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           +S Y   G F   ++SFV M      PN  T   VL +C+GL  +  GK VHC + + G 
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGF 173

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
           G    +    LI+ YA+C  + +   V       + +SW  LI+ Y R G   EA+++  
Sbjct: 174 GFR-SFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFD 232

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
           +MQ  G +PD  ++                                   ++I+ Y   G 
Sbjct: 233 KMQRVGHVPDQIALV----------------------------------TVINAYVALGR 258

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  LF +I   +VV WN MI G  + G + EAI+ F ++    L+    +  + + A
Sbjct: 259 LADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
            +++  L  G  VH + I  G+  ++Y+ +AL +MYAKC  +  A++VF+S+ ERN+V W
Sbjct: 319 IASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLW 378

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +AM+  +  +G   +    F  M   G +P+E TF +I  AC+    ++ G      M  
Sbjct: 379 NAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIK 438

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                +L     +VD+ ++SG ++ A K    M    N S W A++ G
Sbjct: 439 NKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVS-WNAIIVG 485



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 9/308 (2%)

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IH   +KI       + + ++D+Y KCG  + A   F R+++K V  WNS++  +  +G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
               +  F  M+ + +  +E TF   + ACS +  +  GK VH  +   G     +    
Sbjct: 123 FATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGG 182

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L DMYAKC +L+ A+ VFD     + VSW+ +I  Y   G   +A  +F +M   G  P+
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPD 242

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FK 656
           ++  + ++ A    G + + +  F  +      P++  +  M+   ++ G  E A   F 
Sbjct: 243 QIALVTVINAYVALGRLADARKLFTQIP----NPNVVAWNVMISGHAKRGFAEEAISFFL 298

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEG 715
            +      A  S  G++L+       ++    +  +    G +DN Y  + L N+YA+  
Sbjct: 299 ELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCS 358

Query: 716 NWDEFGKV 723
             D   +V
Sbjct: 359 KMDAAKQV 366


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 216/713 (30%), Positives = 384/713 (53%), Gaps = 10/713 (1%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           + LI+++++      +  VF      + + W  +I   + N  +     L+H+M      
Sbjct: 11  SSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQK 70

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
             ++ Y SVL AC+SL +L  G+ V  R+IKCG + D  + TSI+  Y + G + +AR+V
Sbjct: 71  PDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREV 129

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F ++++  VVSW+ +++ Y  + D    L++F  M   GVE +  T+ S+  ACG    +
Sbjct: 130 FSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMV 189

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK-RCTTSWTAMISC 271
             A  +H  V +    +D  +  + I M SK GD+  +ER F  ++  R       M++ 
Sbjct: 190 CEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTS 249

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           ++++    KA+  F +ML+    P+  ++ ++L   + L  L  GK VH   ++ G+  +
Sbjct: 250 FSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL---SVLDCLNLGKQVHSYTLKSGLILD 306

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G +L   Y++CG + E   +   I  ++   W  +IS +   G  +EA+ L  +M 
Sbjct: 307 LT-VGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEML 365

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFK 449
             G  PD  ++A+ L+ C ++ SL    +IHG+ ++  ID +   + S+L++ YSKCG  
Sbjct: 366 DEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGID-RGMPLGSALVNTYSKCGSL 424

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            LA  +++R+ +   V  +S+I G+ Q+G   +   LF  M ++   MD     + ++A 
Sbjct: 425 KLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAA 484

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
               + E G  VH  +   G+  +  + ++L  MY+K G ++   + F  ++  ++++W+
Sbjct: 485 VLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWT 544

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           A+I  Y  HG+ N+A  ++  M + G KP++VTF+ +L ACSH G VEEG F+ N+M + 
Sbjct: 545 ALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKD 604

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           +G+EP+ +HY CMVD L RSG +  A   I++ P   +  +WG LL  C+I+  +++ K 
Sbjct: 605 YGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKL 664

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             K+      +D G Y  LSNI AE G WDE  + R +M+ TG++K PG+S++
Sbjct: 665 AAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 717



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 199/406 (49%), Gaps = 5/406 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVLIKCYMW 72
           +++HA +  +G + D   +  LI   ++ G +  S  VF+   +     +  V++  +  
Sbjct: 193 SQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQ 252

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N    ++I L+ +M++E      F   SV    S L  L  G++VH   +K G   D  +
Sbjct: 253 NKKPGKAIRLFTRMLQEGLNPDEF---SVCSLLSVLDCLNLGKQVHSYTLKSGLILDLTV 309

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            +S+   Y + G L+++  +F ++  +D   W+S+I+ + +   + E + +F  M+ EG 
Sbjct: 310 GSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGT 369

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            PD  T+ ++   C  L SL  ++ IHG+ LR  I    PLG++ +  YSKCG L  A +
Sbjct: 370 SPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARK 429

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            + ++ +    S +++IS Y++ G  Q     F  M+      +   + ++L +      
Sbjct: 430 VYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEE 489

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              G  VH  I + G+  E   +G +L+  Y++ G + +C K    I   ++++W  LI+
Sbjct: 490 SELGAQVHAYITKIGLCTE-PSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIA 548

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
            YA+ G + EAL++   M+  G  PD  +    LSAC + G ++ G
Sbjct: 549 SYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEG 594



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 38/442 (8%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           C NL K  ++H++ L +GL  D    + L   Y++ GSL  S  +F      D+  WA +
Sbjct: 287 CLNLGK--QVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASM 344

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I  +    +  E+I L+ +M+ E  +       +VL  CSSL  L   +++HG  ++ G 
Sbjct: 345 ISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGI 404

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D+   + ++++ TY + G L  ARKV+D++   D VS SS+I+ Y  +  V +G  +F  
Sbjct: 405 DRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRD 464

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           MV  G   D   + S+ +A            +H ++ +  +  +  +G+S + MYSK G 
Sbjct: 465 MVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 524

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +    + F +I      +WTA+I+ Y + G   +AL+ +  M E   +P+ +T + VL +
Sbjct: 525 IEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSA 584

Query: 307 CAGLGWLREGK-SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           C+  G + EG   ++  +   G+ PE  +    +++     G++ E E  I+        
Sbjct: 585 CSHGGLVEEGYFHLNSMVKDYGIEPENRHY-VCMVDALGRSGRLREAENFIN-------- 635

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
                                     T  + PD+    + L+AC   G ++LG       
Sbjct: 636 --------------------------TRPIKPDALVWGTLLAACKIYGDVELGKLAAKKA 669

Query: 426 IKIDCKDEFVQSSLIDMYSKCG 447
           I+++  D     SL ++ ++ G
Sbjct: 670 IELEPSDAGAYVSLSNILAEVG 691


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 211/618 (34%), Positives = 333/618 (53%), Gaps = 11/618 (1%)

Query: 111 LGSGEKVHGRIIKCGFDKDDV---IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           L   + +HG  I  G         + + +  +Y   GC+  ARK+FD ++   +  W++I
Sbjct: 95  LNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAI 154

Query: 168 IASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           I  Y D     + L++F SM+  G   PD  T   + +AC  +  L     IHG  L   
Sbjct: 155 IKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSG 214

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              +  + NS + MY  CG +  A + F  + KR   SW  MIS + ++G  ++AL  F 
Sbjct: 215 FSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFN 274

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
            M++ + EP+  T+++ L SC  L  L  G  VH ++++K    E   +  AL++ Y+ C
Sbjct: 275 SMMDARVEPDSATIVSALPSCGHLKELELGIKVH-KLVQKNHLQEKIEVRNALVDMYSRC 333

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G M E   V     E+++++W  +I+ Y   G +K AL L   MQ  G++P++ ++AS L
Sbjct: 334 GGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLL 393

Query: 407 SACGNVGSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           SAC ++  L+ G  +H  V+  K+D  D  V ++LIDMY+KC   + ++ +F +   K  
Sbjct: 394 SACASLCCLKQGKSLHAWVMRKKLD-SDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRT 452

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V WN+++ G   N  + EA+ LF  M +  +E +  TF + I A + +  L++   +H  
Sbjct: 453 VPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSY 512

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAMIDCYGMHGQLN 582
           L+  G    I + T L DMY+KCG L  A ++FD +   E++++ WS +I  YGMHG   
Sbjct: 513 LVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 572

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
            A  LF QM+ SG++PNE+TF ++L ACSH G V++G   F  M   +   P   HY C+
Sbjct: 573 TAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCV 632

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           VDLL R+G ++ A+ +I SMPF  N SIWGALL  C IH+ +++ +   + L        
Sbjct: 633 VDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPEST 692

Query: 702 GYYTLLSNIYAEEGNWDE 719
           G Y LL+NIYA  G W +
Sbjct: 693 GNYILLANIYAAVGRWKD 710



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 180/638 (28%), Positives = 322/638 (50%), Gaps = 43/638 (6%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPP---ASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + +  +L K   LH H + +GL + P      + L  SYA  G +  +R +FD   +P  
Sbjct: 89  YAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSL 148

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           F+W  +IK Y+   F  +++ ++  MI   +     + +P V++ACS +  L  G  +HG
Sbjct: 149 FLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHG 208

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R +  GF  +  +Q S+L  Y   G +  AR+VF+ M  R VVSW+++I+ +F N    E
Sbjct: 209 RALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEE 268

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F+SM+   VEPD  T++S   +CG L  L     +H  V +  ++    + N+ + 
Sbjct: 269 ALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVD 328

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYS+CG +  A   F + +++   +WT+MI+ Y  +G  + AL     M      PN +T
Sbjct: 329 MYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L ++L +CA L  L++GKS+H  ++RK +  +   +  ALI+ YA+C  +S   +V    
Sbjct: 389 LASLLSACASLCCLKQGKSLHAWVMRKKLDSDV-LVVTALIDMYAKCNAVSYSFQVFAKT 447

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             +  + WN L+S      +++EA+ L   M    +  +  +  S + A   +  L+  +
Sbjct: 448 SMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVM 507

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQ 476
            +H ++++     +  V + LIDMYSKCG  + A+ +F+ I  ++K +++W+ +I G+  
Sbjct: 508 NLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGM 567

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G+   A+ LF+QM  + ++ +E+TF + + ACS+ G ++ G      L  Y +    Y 
Sbjct: 568 HGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGL----TLFKYMIEN--YP 621

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            + L + Y                        + ++D  G  G+L++A  L K M     
Sbjct: 622 SSPLPNHY------------------------TCVVDLLGRAGRLDEAYDLIKSM---PF 654

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           + N   +  +L AC    +VE G+    A R+F +EP+
Sbjct: 655 QQNHSIWGALLGACLIHQNVELGEVA--AERLFELEPE 690



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 254/499 (50%), Gaps = 11/499 (2%)

Query: 211 SLRPARSIHGHVLRRKIKIDGP----LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
           SL   + +HGH +   + +  P    L +   V Y+ CG +  A + F  +       W 
Sbjct: 94  SLNKTKILHGHTITSGL-LHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWN 152

Query: 267 AMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           A+I  Y   G+   AL  F  M+   K  P+  T   V+ +C+ +  L  G  +H + + 
Sbjct: 153 AIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALV 212

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G      ++  +L+  Y  CGK+    +V + + +R+++SWN +IS + + G  +EAL 
Sbjct: 213 SGFSSNM-FVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALA 271

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYS 444
           +   M    + PDS ++ S+L +CG++  L+LG+++H  V K   +++  V+++L+DMYS
Sbjct: 272 VFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYS 331

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           +CG  + A L+F   ++K V+ W SMI G+  NGN+  A+ L   M L+ +  + VT  +
Sbjct: 332 RCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLAS 391

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + AC+++  L++GK +H  ++   +  D+ + TAL DMYAKC  +  + +VF   S + 
Sbjct: 392 LLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKR 451

Query: 565 VVSWSAMIDCYGMHGQL-NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
            V W+A++    +H +L  +A  LFK ML   ++ N  TF +++ A +    +++     
Sbjct: 452 TVPWNALLSGL-IHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLH 510

Query: 624 NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI-WGALLNGCRIHKR 682
           + +   G    +     ++D+ S+ G ++ A K+   +P      I W  L+ G  +H  
Sbjct: 511 SYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGH 570

Query: 683 IDVMKTIEKELSVTGTNDN 701
            +    +  ++  +G   N
Sbjct: 571 GETAVLLFNQMVHSGMQPN 589



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 6/185 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KEP 58
           +P +    +L+++  LH++L+ +G        T LI+ Y++ GSL  +  +FD    KE 
Sbjct: 494 IPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEK 553

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D  +W+VLI  Y  +   E ++LL+++M+      +   + SVL ACS  G +  G  + 
Sbjct: 554 DIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLF 613

Query: 119 GRIIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYFDNA 175
             +I+  +    +    T ++   G  G LD+A  +   M  +   S W +++ +   + 
Sbjct: 614 KYMIE-NYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQ 672

Query: 176 DVSEG 180
           +V  G
Sbjct: 673 NVELG 677


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 214/649 (32%), Positives = 349/649 (53%), Gaps = 12/649 (1%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           SNF+  S L+     GDL    K+   +      K+     +++  Y + G L +AR +F
Sbjct: 104 SNFLVKSFLQR----GDLNGARKLFDEMPH----KNIFSTNTMIMGYIKSGNLSEARTLF 155

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D M  R  V+W+ +I  Y  N    E   +F  M R G++PD V++ +L     E  S+ 
Sbjct: 156 DSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVN 215

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             R +H HV++        + NS +  Y K   L  A + F  I +R + ++ A+++ Y+
Sbjct: 216 EVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYS 275

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G+ ++A+  F KM EV   P   T   +L +   L  +  G+ VH  +++        
Sbjct: 276 KEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNV- 334

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++  AL++FY++  ++ E  K+ + + E + +S+N+L++ YA  G  KE+LEL  ++Q  
Sbjct: 335 FVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFT 394

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLA 452
           G    +F  A+ LS      +L +G QIH   I  D   E  V +SL+DMY+KCG    A
Sbjct: 395 GFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEA 454

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F  +  +S V W +MI  + Q G   + + LF +M    +  D  T+ + ++AC+++
Sbjct: 455 NRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASL 514

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L  GK +H  +I  G   +++  +AL DMYAKCG ++ A ++F  M  RN VSW+A+I
Sbjct: 515 ASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALI 574

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             Y  +G  +    LF++M+ SG++P+ V+ ++IL ACSH G VEEG  YF++M RI+ +
Sbjct: 575 SAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKL 634

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            P  +HYA  +D+L R G  + A K++  MPF  +  +W ++LN C IHK  ++ K    
Sbjct: 635 VPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAAN 694

Query: 692 EL-SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +L ++    D   Y  +SNIYA  G WD  GKV+  M   G+KKVP YS
Sbjct: 695 QLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYS 743



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 304/618 (49%), Gaps = 20/618 (3%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H +  ++  +I  Y + G+L  +R +FD+  +  +  W +LI  Y  NN F E+  L+ +
Sbjct: 129 HKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIE 188

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M R      +    ++L   +    +    +VH  +IK G+D   V+  S+L +Y +   
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L  A ++F+ +  RD V++++++  Y       E + +F  M   G  P   T  ++  A
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
             +L  +   + +HG V++     +  + N+ +  YSK   ++ A + F ++ +    S+
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
             +++CY  +G  +++LE F ++     +       T+L   A    L  G+ +H Q I 
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV 428

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
                E   +G +L++ YA+CG+  E  ++   +  ++ + W  +IS Y +KG+ ++ L+
Sbjct: 429 TDAISEI-LVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLK 487

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYS 444
           L V+MQ   +  D+ + AS + AC ++ SL LG Q+H H+I      + F  S+L+DMY+
Sbjct: 488 LFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYA 547

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  +F+ +  ++ V WN++I  + QNG+    + LF +M  + L+ D V+ L+
Sbjct: 548 KCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLS 607

Query: 505 AIQACSNIGQLEKGKWVH------HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
            + ACS+ G +E+G          +KL+    +K+ Y  T   DM  + G    A+++  
Sbjct: 608 ILCACSHCGLVEEGLQYFDSMTRIYKLVP---KKEHYAST--IDMLCRGGRFDEAEKLMA 662

Query: 559 SMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE---VTFMNILWACSHSG 614
            M  E + + WS++++  G+H     A     Q+ +  +  +    VT  NI  A     
Sbjct: 663 QMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWD 722

Query: 615 SVEEGKFYFNAMRIFGVE 632
           +V + K    AMR  GV+
Sbjct: 723 NVGKVK---KAMRERGVK 737



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 264/565 (46%), Gaps = 39/565 (6%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    ++ ++ ++H+H++  G       S  L++SY +  SL  +  +F+   E DS  +
Sbjct: 208 FTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTF 267

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             L+  Y    F  E+I L+ KM       + F + ++L A   L D+  G++VHG ++K
Sbjct: 268 NALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVK 327

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
           C F  +  +  ++L  Y +   + +A K+F +M   D +S++ ++  Y  N  V E L++
Sbjct: 328 CNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLEL 387

Query: 184 FHSMVREGVEP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           F  +   G +     F T+LS+A       +L   R IH   +      +  +GNS + M
Sbjct: 388 FKELQFTGFDRRNFPFATLLSIAAIS---LNLDIGRQIHSQTIVTDAISEILVGNSLVDM 444

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG+   A R F  +  + +  WTAMIS Y + G  +  L+ FV+M   K   +  T 
Sbjct: 445 YAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATY 504

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            +++ +CA L  L  GK +H  II  G      + G AL++ YA+CG + +  ++   + 
Sbjct: 505 ASIVRACASLASLTLGKQLHSHIIGSGYISNV-FSGSALVDMYAKCGSIKDALQMFQEMP 563

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            RN +SWN LIS YA+ G     L L  +M   GL PDS S+ S L AC + G ++ GLQ
Sbjct: 564 VRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQ 623

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
               + +I                        Y L  + +  +  +   M+C   + G  
Sbjct: 624 YFDSMTRI------------------------YKLVPKKEHYASTI--DMLC---RGGRF 654

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            EA  L  QM     E DE+ + + + +C      E  K   ++L +  V +D      +
Sbjct: 655 DEAEKLMAQM---PFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTM 711

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNV 565
           +++YA  G+     +V  +M ER V
Sbjct: 712 SNIYAAAGEWDNVGKVKKAMRERGV 736



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 130/553 (23%), Positives = 256/553 (46%), Gaps = 54/553 (9%)

Query: 164 WSSIIASYFDNADV--SEGLKMFHSMVREGVEP---DFVTMLSLAEACGELCSLRPARSI 218
           W+ +I   F NA    S+  ++  S++   ++P   + VT L+         + +P   +
Sbjct: 38  WTCVICLIFTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTTLT---------APKPHLHV 88

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-------------------- 258
              +++     +    N  +  + + GDL  A + F ++                     
Sbjct: 89  DASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNL 148

Query: 259 -----------KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
                      +R   +WT +I  Y ++  F++A   F++M     +P+ ++L T+L   
Sbjct: 149 SEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGF 208

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNI 364
                + E + VH  +I+ G    YD    +  +L++ Y +   +    ++ + I ER+ 
Sbjct: 209 TEFDSVNEVRQVHSHVIKLG----YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDS 264

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +++N L++ Y+++G ++EA+ L  +MQ  G  P  F+ A+ L+A   +  ++ G Q+HG 
Sbjct: 265 VTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGF 324

Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           V+K +   + FV ++L+D YSK      A  LF  + +   + +N ++  +  NG   E+
Sbjct: 325 VVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKES 384

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + LF ++     +     F T +   +    L+ G+ +H + I      +I +  +L DM
Sbjct: 385 LELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDM 444

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG+   A R+F  ++ ++ V W+AMI  Y   G   D   LF +M  + I  +  T+
Sbjct: 445 YAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATY 504

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +I+ AC+   S+  GK   + +   G   ++   + +VD+ ++ G I+ A +M   MP 
Sbjct: 505 ASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPV 564

Query: 664 PANGSIWGALLNG 676
             N   W AL++ 
Sbjct: 565 -RNSVSWNALISA 576



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 20/181 (11%)

Query: 460 QQKSVVMWNSMICGFYQNGNSLEA------INLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           +  S+ +W  +IC  + N     +      ++L + +   C   + VT LTA +   +  
Sbjct: 31  KNDSIKVWTCVICLIFTNAGHFGSKQYELTLSLMNNIIKPCTR-NLVTTLTAPKPHLH-- 87

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
                  V   +I  G   + Y    L   + + GDL  A+++FD M  +N+ S + MI 
Sbjct: 88  -------VDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIM 140

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y   G L++A +LF    DS  +   VT+  ++   + +    E    F  M   G++P
Sbjct: 141 GYIKSGNLSEARTLF----DSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDP 196

Query: 634 D 634
           D
Sbjct: 197 D 197


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 191/602 (31%), Positives = 338/602 (56%), Gaps = 6/602 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSL 202
           G L +AR++FDKM+ +D +SW+++I+ Y +  D SE L +F +M V  G+  D   +LSL
Sbjct: 63  GHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPF-ILSL 121

Query: 203 A-EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           A +ACG    +     +HG+ ++  +     +G++ + MY+K G +    R F ++  R 
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN 181

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SWTA+I+   R+G+ ++AL  F +M   + E +  T    L +CA  G L  G+ +H 
Sbjct: 182 VVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHA 241

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           Q ++KG      ++   L   Y +CGK+     +   +  R+++SW  +I+   + G  +
Sbjct: 242 QAMKKGFDVS-SFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
            A++  ++M+   + P+ ++ A+ +S C N+  ++ G Q+H  ++ +       V++S++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MY+KCG    + ++F  + ++ +V W+++I G+ Q G+  EA  L   M +   +  E 
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEF 420

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              + + AC N+  LE GK +H  ++S G+     + +AL +MY KCG ++ A R+FD+ 
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAA 480

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              ++VSW+AMI+ Y  HG   +   LF+++   G++P+ VTF+ +L ACSH+G V+ G 
Sbjct: 481 ENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGF 540

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            YFNAM + + + P  +HY CM+DLL R+G +  A  MI +MPF  +  +W  LL  CR+
Sbjct: 541 RYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRV 600

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           H  ++  +   + +     N  G +  L+NIYA +G W E   +R +M+  G+ K PG+S
Sbjct: 601 HGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWS 660

Query: 740 TI 741
            I
Sbjct: 661 WI 662



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 181/612 (29%), Positives = 307/612 (50%), Gaps = 16/612 (2%)

Query: 7   CTNLRKLTRLHAHLLVTGLHY----DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           C +L+ L R + +L    +H+    D P S + ++   + G L ++R +FD   + D   
Sbjct: 24  CIDLQVLERSNDNL-SQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEIS 82

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W  LI  Y+  N   E++LL+  M  E    I  FI     +AC    D+  GE +HG  
Sbjct: 83  WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYA 142

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K G      + +++L  Y + G + + R+VF +M  R+VVSW++II          E L
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
             F  M R  VE D  T     +AC +  +L   R IH   +++   +   + N+   MY
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KCG L      F K+  R   SWT +I+   + G  + A+++F++M E    PN  T  
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            V+  CA L  +  G+ +H  I+  G+      +  +++  YA+CG+++    + H +  
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLS-VENSIMTMYAKCGQLTSSSVIFHEMTR 381

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+I+SW+ +I+ Y++ G   EA ELL  M+  G  P  F++AS LSACGN+  L+ G Q+
Sbjct: 382 RDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL 441

Query: 422 HGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H +V+ I  +    V S+LI+MY KCG    A  +F+  +   +V W +MI G+ ++G S
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTA 539
            E I+LF ++    L  D VTF+  + ACS+ G ++ G ++ +     Y +         
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGC 561

Query: 540 LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           + D+  + G L  A+ + ++M   R+ V WS ++    +HG +       +++L   ++P
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQ--LEP 619

Query: 599 N----EVTFMNI 606
           N     +T  NI
Sbjct: 620 NCAGTHITLANI 631


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 206/600 (34%), Positives = 336/600 (56%), Gaps = 9/600 (1%)

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           +F    DAR++F +MT R +  W++++ S        E L  F  M R+  +PD  T+  
Sbjct: 6   KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERTFVKIEK 259
             +ACGEL  +     IHG V ++ + +   L  G+S I MY KCG ++ A R F ++EK
Sbjct: 66  ALKACGELREVNYGEMIHGFV-KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKS 318
               +W++M+S + ++G   +A+E F +M+   +  P+ +TLIT++ +C  L   R G+ 
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           VH  +IR+G   +   +  +L+  YA+     E   +   I E++++SW+ +I+ Y + G
Sbjct: 185 VHGFVIRRGFSNDLSLVN-SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQS 437
            + EAL +   M   G  P+  +V   L AC     L+ G + H   I+   + E  V +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLE 496
           +L+DMY KC     AY +F RI +K VV W ++I GF  NG +  +I  F  M L N   
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D +  +  + +CS +G LE+ K  H  +I YG   + +I  +L ++Y++CG L  A +V
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGS 615
           F+ ++ ++ V W+++I  YG+HG+   A   F  M+ S  +KPNEVTF++IL ACSH+G 
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 483

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           + EG   F  M   + + P+L+HYA +VDLL R GD++ A ++   MPF     I G LL
Sbjct: 484 IHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLL 543

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CRIH+  ++ +T+ K+L    +N  GYY L+SN+Y  +G W+   K+R+ ++  G+KK
Sbjct: 544 GACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 603



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 270/522 (51%), Gaps = 13/522 (2%)

Query: 48  SRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS 107
           +R +F    +   + W  L+K       +EE +  +  M R++    NF  P  L+AC  
Sbjct: 13  ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72

Query: 108 LGDLGSGEKVHGRIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           L ++  GE +HG + K      D  + +S++  Y + G + +A ++FD++   D+V+WSS
Sbjct: 73  LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132

Query: 167 IIASYFDNADVSEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           +++ +  N    + ++ F  MV    V PD VT+++L  AC +L + R  R +HG V+RR
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
               D  L NS +  Y+K      A   F  I ++   SW+ +I+CY ++G   +AL  F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
             M++   EPN+ T++ VL +CA    L +G+  H   IRKG+  E   +  AL++ Y +
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK-VSTALVDMYMK 311

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE----LLVQMQTWGLMPDSFS 401
           C    E   V   I  ++++SW  LIS +   GM+  ++E    +L++  T    PD+  
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT---RPDAIL 368

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           +   L +C  +G L+     H +VIK     + F+ +SL+++YS+CG    A  +F  I 
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGK 519
            K  V+W S+I G+  +G   +A+  F+ M  +  ++ +EVTFL+ + ACS+ G + +G 
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488

Query: 520 WVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            +   +++ Y +  ++     L D+  + GDL TA  +   M
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 231/469 (49%), Gaps = 17/469 (3%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    + LI  Y + G +  +  +FD  ++PD   W+ ++  +  N    +++  + +M+
Sbjct: 95  DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154

Query: 88  -REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL 146
                T       +++ AC+ L +   G  VHG +I+ GF  D  +  S+L  Y +    
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            +A  +F  +  +DV+SWS++IA Y  N   +E L +F+ M+ +G EP+  T+L + +AC
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
                L   R  H   +R+ ++ +  +  + + MY KC     A   F +I ++   SW 
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 334

Query: 267 AMISCYNRSGWFQKALESF-VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           A+IS +  +G   +++E F + +LE    P+ I ++ VLGSC+ LG+L + K  H  +I+
Sbjct: 335 ALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK 394

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G      ++G +L+E Y+ CG +    KV + I  ++ + W  LI+ Y   G   +ALE
Sbjct: 395 YGFDSN-PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 453

Query: 386 LLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS------ 438
               M ++  + P+  +  S LSAC + G +  GL+I     K+   D  +  +      
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FKLMVNDYRLAPNLEHYAV 509

Query: 439 LIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNGNSLEAI 484
           L+D+  + G  + A  + +R+    +  +  +++  C  +QNG   E +
Sbjct: 510 LVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 558



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 166/321 (51%), Gaps = 5/321 (1%)

Query: 1   MPLFRSCTNLR--KLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +CT L   +L R +H  ++  G   D      L+  YA+  + + +  +F    E
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE 226

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W+ +I CY+ N    E++L+++ M+ +    +      VL+AC++  DL  G K 
Sbjct: 227 KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT 286

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   I+ G + +  + T+++  Y +    ++A  VF ++  +DVVSW ++I+ +  N   
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346

Query: 178 SEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
              ++ F  M+ E    PD + M+ +  +C EL  L  A+  H +V++     +  +G S
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EP 295
            + +YS+CG L +A + F  I  + T  WT++I+ Y   G   KALE+F  M++  E +P
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466

Query: 296 NLITLITVLGSCAGLGWLREG 316
           N +T +++L +C+  G + EG
Sbjct: 467 NEVTFLSILSACSHAGLIHEG 487


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 224/651 (34%), Positives = 366/651 (56%), Gaps = 16/651 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L+      D  +G+ +H  I+K G   D   Q  +L TY  FG L+DA K+FD+M 
Sbjct: 6   YANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMP 65

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRP 214
             + VS+ ++   +  +       ++   + REG E +   F T+L L      L S+  
Sbjct: 66  LTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKL------LVSMDL 119

Query: 215 AR---SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           A    S+H +V +   + D  +G + I  YS CG++ +A + F  I  +   SWT M++C
Sbjct: 120 ADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVAC 179

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y  +   + +L  F +M  +   PN  T+   L SC GL   + GKSVH   ++     +
Sbjct: 180 YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM- 390
             Y+G AL+E Y + G+++E ++    + + +++ W+++IS YA+   SKEALEL  +M 
Sbjct: 240 L-YVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMR 298

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFK 449
           Q+  ++P++F+ AS L AC ++  L LG QIH  V+K+      FV ++L+D+Y+KCG  
Sbjct: 299 QSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEI 358

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             +  LF    +K+ V WN++I G+ Q G+  +A+NLF  M    ++  EVT+ + ++A 
Sbjct: 359 ENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRAS 418

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +++  LE G+ +H   I     KD  +  +L DMYAKCG +  A+  FD M +++ VSW+
Sbjct: 419 ASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWN 478

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           A+I  Y +HG   +A +LF  M  S  KPN++TF+ +L ACS++G +++G+ +F +M + 
Sbjct: 479 ALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQD 538

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           +G+EP ++HY CMV LL RSG  + A K+I  +PF  +  +W ALL  C IHK +D+ K 
Sbjct: 539 YGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKV 598

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             + +      D+  + LLSN+YA    WD    VR  M+   +KK PG S
Sbjct: 599 CAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLS 649



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 166/572 (29%), Positives = 301/572 (52%), Gaps = 7/572 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH H+L  G   D  A   L+ +Y   G L  +  +FD     ++  +  L + +  ++ 
Sbjct: 25  LHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQ 84

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F+ +  L  ++ RE   ++ F++ ++L+   S+    +   VH  + K G   D  + T+
Sbjct: 85  FQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTA 144

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y   G +D AR+VFD +  +D+VSW+ ++A Y +N    + L +F  M   G  P+
Sbjct: 145 LIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPN 204

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ +  ++C  L + +  +S+HG  L+     D  +G + + +Y+K G++  A++ F 
Sbjct: 205 NFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFE 264

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-EEPNLITLITVLGSCAGLGWLR 314
           ++ K     W+ MIS Y +S   ++ALE F +M +     PN  T  +VL +CA L  L 
Sbjct: 265 EMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLN 324

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G  +H  +++ G+     ++  AL++ YA+CG++    K+     E+N ++WN +I  Y
Sbjct: 325 LGNQIHSCVLKVGLDSNV-FVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGY 383

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDE 433
            + G  ++AL L   M    + P   + +S L A  ++ +L+ G QIH   IK +  KD 
Sbjct: 384 VQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDS 443

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V +SLIDMY+KCG  + A L F+++ ++  V WN++ICG+  +G  +EA+NLF  M  +
Sbjct: 444 VVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQS 503

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHK--LISYGVRKDIYIDTALTDMYAKCGDLQ 551
             + +++TF+  + ACSN G L+KG+  H K  L  YG+   I   T +  +  + G   
Sbjct: 504 NSKPNKLTFVGVLSACSNAGLLDKGR-AHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFD 562

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN 582
            A ++   +  + +V+ W A++    +H  L+
Sbjct: 563 EAVKLIGEIPFQPSVMVWRALLGACVIHKNLD 594



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 156/346 (45%), Gaps = 40/346 (11%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C +L  L    ++H+ +L  GL  +   S  L++ YA+ G + +S  +F    E +
Sbjct: 313 VLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKN 372

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+     E+++ L+  M+      +   Y SVLRA +SL  L  G ++H 
Sbjct: 373 EVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHS 432

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK  ++KD V+  S++  Y + G +DDAR  FDKM  +D VSW+++I  Y  +    E
Sbjct: 433 LTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGME 492

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M +   +P+ +T + +  AC     L   R+                   F  
Sbjct: 493 ALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRA------------------HFKS 534

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
           M    G           IE  C   +T M+    RSG F +A    VK++ E+  +P+++
Sbjct: 535 MLQDYG-----------IEP-CIEHYTCMVWLLGRSGQFDEA----VKLIGEIPFQPSVM 578

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
               +LG+C     L  GK    +++   M P+ D     L   YA
Sbjct: 579 VWRALLGACVIHKNLDLGKVCAQRVLE--MEPQDDATHVLLSNMYA 622



 Score = 40.4 bits (93), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 47/111 (42%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD  ++   +Q          GK +H  ++ +G   D++    L + Y   G L+ A ++
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           FD M   N VS+  +   +    Q   A  L  ++   G + N+  F  +L
Sbjct: 61  FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLL 111


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 212/640 (33%), Positives = 358/640 (55%), Gaps = 17/640 (2%)

Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
            D  +G+ +H  I+K G   D   Q  +L  Y +   L DA K+FD+M   + +S+ ++ 
Sbjct: 49  ADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLA 108

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPAR---SIHGHV 222
             Y  +    + L     + +EG E +   F T+L L      L S+  A    ++H  V
Sbjct: 109 QGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKL------LVSMDLAHLCWTLHACV 162

Query: 223 LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
            +     D  +G + I  YS  G++  A   F  I  +   SWT M++CY  + +++++L
Sbjct: 163 YKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESL 222

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-CQIIRKGMGPEYDYLGPALIE 341
           + F +M  +  +PN  T+   L SC GL     GKSVH C +  KG      ++G AL+E
Sbjct: 223 QLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCAL--KGCYDHDLFVGIALLE 280

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            YA+ G++ + +++   + + +++ W+++I+ YA+   SKEAL+L ++M+   ++P++F+
Sbjct: 281 LYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFT 340

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ 460
            AS L AC +  SL LG QIH  V+K       FV ++++D+Y+KCG    +  LFE + 
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            ++ V WN++I G+ Q G+   A+NLF  M  + ++  EVT+ + ++A +++  LE G  
Sbjct: 401 DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ 460

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H   I     KD  +  +L DMYAKCG +  A+  FD M++R+ VSW+AMI  Y MHG 
Sbjct: 461 IHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGM 520

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYA 639
             +A +LF  M  +  KPN++TF+ +L ACS++G + +G+ +F +M + + ++P ++HY 
Sbjct: 521 SMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYT 580

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
           CMV LL R G  + A K+I  + +  +  +W ALL  C IHK++D+ +   + +     +
Sbjct: 581 CMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPH 640

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           D+  + LLSN+YA  G WD    VR  M+   ++K PG S
Sbjct: 641 DDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLS 680



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/572 (28%), Positives = 307/572 (53%), Gaps = 6/572 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
            LH H+L  G   D  A   L+  Y +  SL+ +  +FD   + ++  +  L + Y  ++
Sbjct: 56  HLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDH 115

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F +++    ++ +E   ++ F++ ++L+   S+        +H  + K G   D  + T
Sbjct: 116 QFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGT 175

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y   G +D AR VFD +  +D+VSW+ ++A Y +N    E L++F+ M   G +P
Sbjct: 176 ALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP 235

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T+    ++C  L +    +S+HG  L+     D  +G + + +Y+K G+++ A+R F
Sbjct: 236 NNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLF 295

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++ K     W+ MI+ Y +S   ++AL+ F++M +    PN  T  +VL +CA    L 
Sbjct: 296 EEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLD 355

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  +++ G+     ++  A+++ YA+CG++    K+   + +RN ++WN +I  Y
Sbjct: 356 LGKQIHSCVLKFGLNSNV-FVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGY 414

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDE 433
            + G  + A+ L   M    + P   + +S L A  ++ +L+ GLQIH   IK +  KD 
Sbjct: 415 VQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDT 474

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V +SLIDMY+KCG  N A L F+++ ++  V WN+MICG+  +G S+EA+NLF  M   
Sbjct: 475 VVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHT 534

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQ 551
             + +++TF+  + ACSN G L KG+  H + +S  Y ++  I   T +  +  + G   
Sbjct: 535 DCKPNKLTFVGVLSACSNAGLLYKGQ-AHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFD 593

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN 582
            A ++   ++ + +V+ W A++    +H +++
Sbjct: 594 EAMKLIGEIAYQPSVMVWRALLGACVIHKKVD 625



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 254/547 (46%), Gaps = 49/547 (8%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+E YA+ G +  ++ +F+   + D   W+++I  Y  ++  +E++ L+ +M +     +
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           NF + SVL+AC+S   L  G+++H  ++K G + +  +  +I+  Y + G ++++ K+F+
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           ++  R+ V+W++II  Y    D    + +F  M+   ++P  VT  S+  A   L +L P
Sbjct: 398 ELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEP 457

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              IH   ++     D  + NS I MY+KCG +  A  TF K+ KR   SW AMI  Y+ 
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G   +AL  F  M     +PN +T + VL +C+  G L +G     Q   + M  +YD 
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-----QAHFESMSKDYD- 571

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           + P  IE Y                     + W +      R G   EA++L+ ++    
Sbjct: 572 IKPC-IEHYT-------------------CMVWLL-----GRLGRFDEAMKLIGEI---A 603

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG-FKNLA- 452
             P      + L AC     + LG     HV++++  D+     L +MY+  G + N+A 
Sbjct: 604 YQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAF 663

Query: 453 ---YLLFERIQQKSVVMW--NSMICGFYQNGN-SLEAINLFHQM--YLNCLEMDE--VTF 502
              Y+  ++++++  + W  N  +  ++  G+ S   I L   M  +LN    D   V  
Sbjct: 664 VRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPD 723

Query: 503 LTAIQACSNIGQLEKGKWVHHK--LISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
             A+       + E+  WVH +   ++YG +R  +     +      C D  T  ++   
Sbjct: 724 CNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISK 783

Query: 560 MSERNVV 566
           + +R +V
Sbjct: 784 VVQREIV 790


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/530 (36%), Positives = 302/530 (56%), Gaps = 2/530 (0%)

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           R    IH  ++   +   G L   F+      G++  A + F +  +     W A+I  Y
Sbjct: 85  RHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           +   +F  A+E + +M      P+  TL  VL +C+G+  L  GK VH QI R G   + 
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            ++   L+  YA+CG++ +   V   + +RNI+SW  +IS Y + G+  EAL +  QM+ 
Sbjct: 205 -FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQ 263

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL 451
             + PD  ++ S L A  +V  L+ G  IHG V+K+  + E  +  SL  MY+KCG   +
Sbjct: 264 RNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMV 323

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A   F++++  +V+MWN+MI G+ +NG + EA+ LF +M    +  D +T  +AI AC+ 
Sbjct: 324 ARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQ 383

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G L+  KW+   +     R D++++TAL DM+AKCG +  A+ VFD   +++VV WSAM
Sbjct: 384 VGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAM 443

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I  YG+HG+  DA  LF  M  +G+ PN+VTF+ +L AC+HSG VEEG   F++M+ +G+
Sbjct: 444 IVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGI 503

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           E   QHYAC+VDLL RSG +  A+  I +MP     S+WGALL  C+I++ + + +   +
Sbjct: 504 EARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAE 563

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +L      + G+Y  LSN+YA    WD   KVR +M   GL K  GYS I
Sbjct: 564 QLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLI 613



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 254/473 (53%), Gaps = 9/473 (1%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           R L ++HA L+V+GL       T+ + +   +G +  +R VFD F EP  F+W  +I+ Y
Sbjct: 85  RHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
             +NFF ++I +Y +M         F  P VL+ACS +  L  G++VHG+I + GF+ D 
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            +Q  ++  Y + G ++ AR VF+ +  R++VSW+S+I+ Y  N    E L++F  M + 
Sbjct: 205 FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
            V+PD++ ++S+  A  ++  L   +SIHG V++  ++ +  L  S   MY+KCG ++ A
Sbjct: 265 NVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVA 324

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              F ++E      W AMIS Y ++G+  +A+  F +M+      + IT+ + + +CA +
Sbjct: 325 RSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQV 384

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G L   K +    I K       ++  ALI+ +A+CG +    +V     +++++ W+ +
Sbjct: 385 GSLDLAKWM-GDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAM 443

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--- 427
           I  Y   G  ++A++L   M+  G+ P+  +    L+AC + G ++ G ++  H +K   
Sbjct: 444 IVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELF-HSMKYYG 502

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
           I+ + +   + ++D+  + G  N AY     +  +  V +W +++  C  Y++
Sbjct: 503 IEARHQHY-ACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRH 554


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 218/674 (32%), Positives = 349/674 (51%), Gaps = 55/674 (8%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S L  C +L  +    +VH +    G  ++ V+   ++  Y  +  LDDA  +FD M 
Sbjct: 84  YISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 140

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RD VSWS ++  +    D       F  ++R G  PD  T+  +  AC +L +L+ A  
Sbjct: 141 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMA-- 198

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
                               + MY KC ++  A   F K+++R   +WT MI  Y   G 
Sbjct: 199 -------------------LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGK 239

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             ++L  F KM E    P+ + ++TV+ +CA LG + + + +   I RK    +   LG 
Sbjct: 240 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV-ILGT 298

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A+I+ YA+CG +    ++   + E+N++SW+ +I+ Y   G  ++AL+L   M + G++P
Sbjct: 299 AMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLP 358

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           D  ++AS L AC N  +L    Q+H    +    ++  V + L+  YS     + AY LF
Sbjct: 359 DKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLF 418

Query: 457 ERIQQKSVVMWNSMICGF-----YQN-----------------------GNSLEAINLFH 488
           + +  +  V W+ M+ GF     Y N                       GN+ E++ LF 
Sbjct: 419 DGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFD 478

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M    +  D+V  +T + AC+ +G + K + +   +     + D+ + TA+ DM+AKCG
Sbjct: 479 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 538

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +++A+ +FD M E+NV+SWSAMI  YG HGQ   A  LF  ML SGI PN++T +++L+
Sbjct: 539 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 598

Query: 609 ACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSH+G VEEG  +F+ M   + V  D++HY C+VDLL R+G ++ A K+I SM    + 
Sbjct: 599 ACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 658

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            +WGA L  CR HK + + +     L      + G+Y LLSNIYA  G W++  K R +M
Sbjct: 659 GLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLM 718

Query: 728 EVTGLKKVPGYSTI 741
               LKK+PG++ I
Sbjct: 719 SQRRLKKIPGWTWI 732



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 161/604 (26%), Positives = 303/604 (50%), Gaps = 53/604 (8%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           +C NL ++ ++HA   V G+  +   + +LI  Y+   +L  +  +FD     DS  W+V
Sbjct: 90  NCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSV 149

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  +     +      + ++IR  A   N+  P V+RAC  L +L              
Sbjct: 150 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL-------------- 195

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
                  Q +++  Y +   ++DAR +FDKM  RD+V+W+ +I  Y +    +E L +F 
Sbjct: 196 -------QMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 248

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M  EGV PD V M+++  AC +L ++  AR I  ++ R+K ++D  LG + I MY+KCG
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            + SA   F ++E++   SW+AMI+ Y   G  +KAL+ F  ML     P+ ITL ++L 
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +C     L + + VH Q    GM      +   L+ FY+    + +   +   +  R+ +
Sbjct: 369 ACINCRNLTQVRQVHAQASVHGMLQNL-IVANKLVHFYSYYRALDDAYGLFDGMCVRDSV 427

Query: 366 SWNMLISEYARK----------------------------GMSKEALELLVQMQTWGLMP 397
           SW++++  +A+                             G + E+L L  +M+  G++P
Sbjct: 428 SWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVP 487

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           D  ++ + + AC  +G++     I  ++ +   + D  + +++IDM++KCG    A  +F
Sbjct: 488 DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 547

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           +R+++K+V+ W++MI  +  +G   +A++LF  M  + +  +++T ++ + ACS+ G +E
Sbjct: 548 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 607

Query: 517 KG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDC 574
           +G ++       Y VR D+   T + D+  + G L  A ++ +SM+ E++   W A +  
Sbjct: 608 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667

Query: 575 YGMH 578
              H
Sbjct: 668 CRTH 671



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 2/152 (1%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    T +I+ +A+ G + S+R +FD  +E +   W+ +I  Y ++    +++ L+  M+
Sbjct: 523 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 582

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ-TSILCTYGEFGCL 146
           R     +     S+L ACS  G +  G +    + +    + DV   T ++   G  G L
Sbjct: 583 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRL 642

Query: 147 DDARKVFDKMT-SRDVVSWSSIIASYFDNADV 177
           D+A K+ + MT  +D   W + + +   + DV
Sbjct: 643 DEALKLIESMTVEKDEGLWGAFLGACRTHKDV 674


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 207/656 (31%), Positives = 358/656 (54%), Gaps = 12/656 (1%)

Query: 97  IYPSVLRACSSL------GDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDA 149
           ++P  L + +SL        L  G  +H +IIK       + +  S++  Y +   L  A
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEG--LKMFHSMVREGVEPDFVTMLSLAEACG 207
           + VFD++ ++DV+SW+ +I  Y           +++F  M  + + P+  T   +  A  
Sbjct: 63  KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            L S+   +  H   ++     D  +G+S + MY K G L  A   F ++ +R   +W  
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWAT 182

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MIS Y       +A E F  M   +E+ N     +VL + A   ++  GK +HC  ++ G
Sbjct: 183 MISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTG 242

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +      L  AL+  YA+CG + +  +V     ++N ++W+ +I+ YA+ G S +AL+L 
Sbjct: 243 LLVFLSILN-ALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLF 301

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKC 446
            +M   G+ P  F++   L+AC +  +++ G Q+H +++K+  + + ++ ++L+DMY+K 
Sbjct: 302 SRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKS 361

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G    A   F  +QQ  +V+W SMI G+ QNG + +A++L+ +M +  +  +E+T  + +
Sbjct: 362 GVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVL 421

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
           +ACSN+   ++G+ +H + I YG+  ++ I +AL+ MYAKCG+L+    VF  M ER+++
Sbjct: 422 KACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDII 481

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW+AMI     +G   +A  LF++M     KP++VTF+N+L ACSH G V+ G  YF  M
Sbjct: 482 SWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMM 541

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
              FG+ P ++HYACMVD+LSR+G +  A + I S        +W  LL  CR ++  ++
Sbjct: 542 FDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYEL 601

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                ++L   G+ ++  Y LLS IY   G  ++  +VRS+M+V G+ K PG S I
Sbjct: 602 GAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWI 657



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 274/535 (51%), Gaps = 7/535 (1%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESIL--LYHKMIRE 89
           +  LI  YA+   L  ++LVFD     D   W  LI  Y        S +  L+ +M  +
Sbjct: 46  ANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRAD 105

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
               +   +  +  A S+L  +  G++ H   IK     D  + +S+L  Y + G L +A
Sbjct: 106 NILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEA 165

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           R+VFD+M  R+ V+W+++I+ Y       E  ++F  M RE  + +     S+  A    
Sbjct: 166 REVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVP 225

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
             +   + IH   ++  + +   + N+ + MY+KCG L  + + F     + + +W+AMI
Sbjct: 226 EFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMI 285

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y +SG   KAL+ F +M      P+  TL+ VL +C+    + EGK VH  +++ G  
Sbjct: 286 TGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFE 345

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  Y+  AL++ YA+ G   +  K  + + + +++ W  +I+ Y + G +++AL L  +
Sbjct: 346 SQL-YIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCR 404

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGF 448
           MQ  G++P+  ++AS L AC N+ +   G QIH   IK     E  + S+L  MY+KCG 
Sbjct: 405 MQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGN 464

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
                ++F R+ ++ ++ WN+MI G  QNG   EA+ LF +M     + D+VTF+  + A
Sbjct: 465 LEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSA 524

Query: 509 CSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           CS++G ++ G W++ +++   +G+   +     + D+ ++ G L  A+   +S +
Sbjct: 525 CSHMGLVDSG-WLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTT 578



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/627 (25%), Positives = 287/627 (45%), Gaps = 69/627 (11%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F + +NL  +    + HA  +     YD    + L+  Y + G L  +R VFD   E +
Sbjct: 117 IFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERN 176

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              WA +I  Y       E+  ++  M RE+  ++ F + SVL A +    + SG+++H 
Sbjct: 177 EVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHC 236

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K G      I  +++  Y + G LDD+ +VF+    ++ ++WS++I  Y  + D  +
Sbjct: 237 LAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHK 296

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F  M   G+ P   T++ +  AC + C++   + +H ++L+   +    +  + + 
Sbjct: 297 ALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVD 356

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K G    A + F  +++     WT+MI+ Y ++G  + AL  + +M      PN +T
Sbjct: 357 MYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELT 416

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +VL +C+ L    +G+ +H + I+ G+G E   +G AL   YA+CG + E   V   +
Sbjct: 417 MASVLKACSNLAAFDQGRQIHARTIKYGLGLEVT-IGSALSTMYAKCGNLEEGNIVFRRM 475

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG- 418
            ER+I+SWN +IS  ++ G  KEALEL  +M+     PD  +  + LSAC ++G +  G 
Sbjct: 476 PERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGW 535

Query: 419 ------LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
                     G + K++       + ++D+ S+ G                         
Sbjct: 536 LYFRMMFDEFGLLPKVEH-----YACMVDVLSRAG------------------------- 565

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
             Y+    +E+  + H +   CL      +   + AC N    E G +   KL+  G ++
Sbjct: 566 KLYEAKEFIESTTIDHGL---CL------WRILLGACRNYRNYELGAYAGEKLMELGSQE 616

Query: 533 -DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV-----VSWSAM---IDCYGMHGQLN- 582
              Y+   L+ +Y   G  +  +RV   M  R V      SW  +   +  + +  Q++ 
Sbjct: 617 SSAYV--LLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHP 674

Query: 583 -------DAASLFKQMLDSGIKPNEVT 602
                  +   L KQM D G +P  VT
Sbjct: 675 CIGEIRTEILRLSKQMKDEGYQPASVT 701


>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 224/746 (30%), Positives = 383/746 (51%), Gaps = 38/746 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L    ++HA +L  G  Y  +    T+L+  YA+  +L  + ++F   + 
Sbjct: 76  ILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRV 135

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA +I         E +++ + +M+  +    NF+ P+V +AC +L     G  V
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGV 195

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K G +    + +S+   YG+ G LDDARKVFD++  R+VV+W++++  Y  N   
Sbjct: 196 HGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMN 255

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++F  M +EGVEP  VT+ +   A   +  +   +  H   +   +++D  LG S 
Sbjct: 256 EEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSL 315

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y K G +  AE  F ++  +   +W  +IS Y + G  + A+     M   K + + 
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDC 375

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL T++ + A    L+ GK V C  IR     +   L   +++ YA+CG + + +KV  
Sbjct: 376 VTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDI-VLASTVMDMYAKCGSIVDAKKVFD 434

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  E++++ WN L++ YA  G+S E L L   MQ  G+ P+  +             + L
Sbjct: 435 STAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVIT----------WNLIIL 484

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            L  +G V   + KD F+Q     M S   F NL             + W +M+ G  QN
Sbjct: 485 SLLRNGEV--DEAKDMFLQ-----MQSSGIFPNL-------------ISWTTMMNGMVQN 524

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
           G S EAI    +M  + L  + V+   A+ AC+N+  L  G+ +H  +I +      + I
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSSVSI 584

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
           +T+L DMYAKCGD+  A++VF S     +  ++AMI  Y ++G L +A +L++ +   G+
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYRSLEGVGL 644

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           KP+ +T  N+L AC+H+G   +       M    G+ P L+HY  MVDLL+ +G  + A 
Sbjct: 645 KPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKAL 704

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           ++I  MP+  +  +  +L+  C    + +++  + ++L  +  +++G Y  +SN YA EG
Sbjct: 705 RLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQLIESEPDNSGNYVTISNAYAVEG 764

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +WDE  K+R IM+  GLKK PG S I
Sbjct: 765 SWDEVVKMREIMKAKGLKKKPGCSWI 790


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 235/755 (31%), Positives = 397/755 (52%), Gaps = 18/755 (2%)

Query: 3    LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
            L ++C++L  L+    +H  ++V G  YDP  +T L+  Y + G L  +  VFD + +  
Sbjct: 567  LLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSG 626

Query: 59   ----DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG-- 112
                D  +   +I  Y     F+E +  + +M+        F    V+      G+    
Sbjct: 627  VSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRRE 686

Query: 113  SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASY 171
             G+++HG +++   D D  ++T+++  Y +FG   DA +VF ++  + +VV W+ +I  +
Sbjct: 687  DGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGF 746

Query: 172  FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
              +      L+++       V+    +      AC +  +    R IH  V++  +  D 
Sbjct: 747  GGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDP 806

Query: 232  PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
             +  S + MYSKCG +  AE  F  +  +    W AM++ Y  +     ALE F  M + 
Sbjct: 807  YVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQK 866

Query: 292  KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
               P+  TL  V+  C+  G    GKSVH ++ ++ +      +  AL+  Y++CG  ++
Sbjct: 867  SVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPI-QSTPAIESALLTLYSKCGCDTD 925

Query: 352  CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW--GLMPDSFSVASSLSAC 409
               V  ++ E+++++W  LIS   + G  KEAL++   M+     L PDS  + S ++AC
Sbjct: 926  AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINAC 985

Query: 410  GNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
              + +L  GLQ+HG +IK     + FV SSLID+YSKCG   +A  +F  ++ +++V WN
Sbjct: 986  AGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWN 1045

Query: 469  SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
            SMI  + +N     +I LF+ M    +  D V+  + + A S+   L KGK +H   +  
Sbjct: 1046 SMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 1105

Query: 529  GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            G+  D ++  AL DMY KCG  + A+ +F  M  +++++W+ MI  YG HG    A SLF
Sbjct: 1106 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLF 1165

Query: 589  KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSR 647
             ++  +G  P++VTF++++ AC+HSG VEEGK +F  M+  +G+EP ++HYA MVDLL R
Sbjct: 1166 DELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGR 1225

Query: 648  SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYYTL 706
            +G +E A+  I +MP  A+ SIW  LL+  R H  +++ + + EK L +     + Y  L
Sbjct: 1226 AGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQL 1285

Query: 707  LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + N+Y E G  +E  K+   M+  GL+K PG S I
Sbjct: 1286 I-NLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWI 1319



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 179/569 (31%), Positives = 295/569 (51%), Gaps = 16/569 (2%)

Query: 94   SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
            S F +PS+L+ACSSL +L SG+ +HG II  G+  D  I TS++  Y + G LD A +VF
Sbjct: 560  SVFTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 619

Query: 154  D-----KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD-FVTMLSLAEACG 207
            D      +++RDV   +S+I  YF      EG+  F  M+  GV PD F   + ++  C 
Sbjct: 620  DGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCK 679

Query: 208  ELCSLRP-ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS-W 265
            E    R   + IHG++LR  +  D  L  + I MY K G    A R FV+IE +     W
Sbjct: 680  EGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLW 739

Query: 266  TAMISCYNRSGWFQKALESFVKMLEVKEEPNLI--TLITVLGSCAGLGWLREGKSVHCQI 323
              MI  +  S   + +LE +  ML       L+  +    LG+C+       G+ +HC +
Sbjct: 740  NVMIVGFGGSEICESSLELY--MLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDV 797

Query: 324  IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
            ++ G+  +  Y+  +L+  Y++CG + E E V   + ++ +  WN +++ Y        A
Sbjct: 798  VKMGLDND-PYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSA 856

Query: 384  LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDM 442
            LEL   M+   ++PDSF++++ +S C   G    G  +H  + K   +    ++S+L+ +
Sbjct: 857  LELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTL 916

Query: 443  YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMDEV 500
            YSKCG    AYL+F+ +++K +V W S+I G  +NG   EA+ +F  M    + L+ D  
Sbjct: 917  YSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 976

Query: 501  TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
               + I AC+ +  L  G  VH  +I  G   ++++ ++L D+Y+KCG  + A +VF SM
Sbjct: 977  IMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 1036

Query: 561  SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
               N+V+W++MI CY  +     +  LF  ML  GI P+ V+  ++L A S + S+ +GK
Sbjct: 1037 RPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 1096

Query: 621  FYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
                     G+  D      ++D+  + G
Sbjct: 1097 SLHGYTLRLGIPSDTHLKNALIDMYVKCG 1125



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 8/217 (3%)

Query: 468 NSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           NS I    Q G  L+A++L+ +    + L     TF + ++ACS++  L  GK +H  +I
Sbjct: 529 NSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSII 588

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD-----SMSERNVVSWSAMIDCYGMHGQL 581
             G R D +I T+L +MY KCG L  A +VFD      +S R+V   ++MID Y    + 
Sbjct: 589 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRF 648

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV--EEGKFYFNAMRIFGVEPDLQHYA 639
            +    F++ML  G++P+  +   ++      G+   E+GK     M    ++ D     
Sbjct: 649 KEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKT 708

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            ++D+  + G    A+++   +   +N  +W  ++ G
Sbjct: 709 ALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVG 745


>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
          Length = 992

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 227/731 (31%), Positives = 387/731 (52%), Gaps = 12/731 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  L +G+  D   +   I  YA  G L SS  +F      +      +I   M +  
Sbjct: 265 LHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGA 324

Query: 76  FEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           +E++  ++ +++R +  + N +   S+L  CS+   +  GE VHG +IK G  +   + +
Sbjct: 325 WEKAFGVF-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVS 383

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G LD A  +F  +T +  + W+S+I+ Y  N   +  +     M  EGV+P
Sbjct: 384 ALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDP 443

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D +T++S+   C     L   +SIH + +R +++++  + N+ + MY+ CG L    + F
Sbjct: 444 DALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLF 503

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +E R   SW  +IS +  +G     L  F +M     + +L+TLI ++ S + +  + 
Sbjct: 504 HTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDIT 563

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+SVH   IR G   +   +  ALI  Y  CG +   EK+  ++   N +S+N L++ Y
Sbjct: 564 VGESVHSLAIRSGCNLDVS-VANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGY 622

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            +  + KE L L   M      P+  ++ + L  C +   LQ G  +H + I+   K E 
Sbjct: 623 RKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPICHS--QLQ-GKTVHSYAIRNFSKLET 679

Query: 435 -VQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
            + +S I MYS+  F NL Y   LF  + +++ ++WN+++    Q   +  A + F Q+ 
Sbjct: 680 SLFTSAICMYSR--FNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQ 737

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              ++ D VT L  I ACS +G+ +  + V    +  G    I +  AL DM+++CG + 
Sbjct: 738 FLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGSIS 797

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+++FD   E++ VSWS MI+ Y MHG    A  LF  M+ +GIKP+++TF+++L ACS
Sbjct: 798 FARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACS 857

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
            SG +E+G+  F +M    G+ P ++HYACMVDLL R+G ++ A+ ++ +MPF  + S+ 
Sbjct: 858 RSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLL 917

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
            +LL  CR H    + +++ K L+ +   +   Y +LSNIYA  G W ++ ++RS ME  
Sbjct: 918 ESLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDMEAK 977

Query: 731 GLKKVPGYSTI 741
           GL K  G S I
Sbjct: 978 GLIKDVGVSLI 988



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 191/680 (28%), Positives = 348/680 (51%), Gaps = 13/680 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KEPD 59
           L R+  + + L++LHA L VTG L  D       +E Y   G   S+  VF  F     +
Sbjct: 49  LLRATRSAKCLSKLHARLAVTGALREDASVVAGAVERYLFFGKPASAAAVFAGFYRGRAE 108

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            +   + ++C+  + F  E + LY ++    +   NF +P V+RAC+++  L  G++VH 
Sbjct: 109 VYDLNIAVRCFSDHGFHRELLGLYREVCAFGS--DNFTFPPVIRACAAVSCLRLGKEVHC 166

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+++ G   +  +QT++L  Y + G +D +R+VFD M SRD++SW+++I+ Y  N  + E
Sbjct: 167 RVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLE 226

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             +    M ++G  P+  +++ +      L        +H   L+  +  D  +  +FI 
Sbjct: 227 AAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFIS 286

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+  G L S+   F +       S  +MIS   + G ++KA   F  M      PNL+T
Sbjct: 287 MYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVT 346

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++++L  C+    +  G+SVH  +I+ G+  +   +  AL+  Y++ G +     +  ++
Sbjct: 347 VVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVV-SALVSMYSKLGDLDSAVFLFSSV 405

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++ L WN LIS Y         +  + +MQ  G+ PD+ +V S +S C +   L +G 
Sbjct: 406 TEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGK 465

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH + ++   + +E V ++L+ MY+ CG  ++   LF  ++ ++++ WN++I GF +NG
Sbjct: 466 SIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENG 525

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +S+  +  F QM L  ++ D VT +  I + S I  +  G+ VH   I  G   D+ +  
Sbjct: 526 DSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVAN 585

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  MY  CG +Q  +++FDS+S  N +S++A++  Y  +    +   LF  M+ +  KP
Sbjct: 586 ALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKP 645

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFG-VEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N +T +N+L  C HS  ++    +  A+R F  +E  L  +   + + SR  ++E    +
Sbjct: 646 NIITLLNLLPIC-HS-QLQGKTVHSYAIRNFSKLETSL--FTSAICMYSRFNNLEYCHNL 701

Query: 658 IHSMPFPANGSIWGALLNGC 677
              +    N  +W A+L+ C
Sbjct: 702 F-CLVGERNNIVWNAILSAC 720


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 228/746 (30%), Positives = 372/746 (49%), Gaps = 32/746 (4%)

Query: 2    PLFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
            P+ + C N   L     +H + +  GL +D   S  L+  Y++ G +R +RL+FD  +E 
Sbjct: 732  PVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER 791

Query: 59   DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
            D  +W +++K Y+     +E+  L+ +  R       F    +L   S            
Sbjct: 792  DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS------------ 839

Query: 119  GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
                +  +D+   +   +     +    DD         + DV  W+  ++      D  
Sbjct: 840  ----EVNWDEGKWLADQVQAYAAKLSLSDD---------NPDVFCWNKKLSECLWAGDNW 886

Query: 179  EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
              ++ F +M    ++ D VT+L +  A      L   + +HG  ++  +  D  + NS +
Sbjct: 887  GAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLV 946

Query: 239  VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             MYSK G    A   F  ++     SW +MIS   +S   ++++  F+ +L    +P+  
Sbjct: 947  NMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHF 1006

Query: 299  TLITVLGSCAGL-GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            TL +VL +C+ L   L   + +H   ++ G   +  ++   LI+ Y++ GKM E E +  
Sbjct: 1007 TLASVLRACSSLIDGLNISRQIHVHALKTGNIAD-SFVATTLIDVYSKSGKMEEAEFLFQ 1065

Query: 358  AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
               + ++  WN ++  Y      K+ALEL   +   G   D  ++A++  ACG +  L  
Sbjct: 1066 NKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQ 1125

Query: 418  GLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G QIH H IK     D  V S ++DMY KCG    A ++F  I     V W SMI G   
Sbjct: 1126 GKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVD 1185

Query: 477  NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            NGN  +A+ ++H+M  + +  DE TF T I+A S +  LE+G+ +H  +I      D ++
Sbjct: 1186 NGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFV 1245

Query: 537  DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             T+L DMYAKCG+++ A R+F  M+ RN+  W+AM+     HG   +A +LFK M   GI
Sbjct: 1246 GTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGI 1305

Query: 597  KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            +P+ V+F+ IL ACSH+G   E   Y ++M   +G+EP+++HY+C+VD L R+G ++ A 
Sbjct: 1306 EPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEAD 1365

Query: 656  KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
            K+I +MPF A+ SI  ALL  CRI   ++  K +   L      D+  Y LLSNIYA   
Sbjct: 1366 KVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAAN 1425

Query: 716  NWDEFGKVRSIMEVTGLKKVPGYSTI 741
             WD+    R +M+   +KK PG+S I
Sbjct: 1426 RWDDVTDARKMMKRKNVKKDPGFSWI 1451



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 187/692 (27%), Positives = 332/692 (47%), Gaps = 42/692 (6%)

Query: 17   HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW---- 72
            HA ++V+G   D   S  L+  Y++ GSL S+R VFDT  E D   W  ++  Y      
Sbjct: 644  HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 703

Query: 73   -NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
             +   +E + L+  +     + +      VL+ C + G L + E VHG  IK G + D  
Sbjct: 704  NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 763

Query: 132  IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
            +  +++  Y + G + DAR +FD M  RDVV W+ ++  Y       E  ++F    R G
Sbjct: 764  VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 823

Query: 192  VEPDFVTMLSLAEACGELCSLRP---ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            + PD  ++  +     E+        A  +  +  +  +  D P                
Sbjct: 824  LRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNP---------------- 867

Query: 249  SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
                 F   +K     W           W   A+E FV M  +  + + +TL+ VL + A
Sbjct: 868  ---DVFCWNKKLSECLWAG-------DNW--GAIECFVNMNGLNIDYDAVTLLVVLAAVA 915

Query: 309  GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            G   L  GK VH   ++ G+  +   +  +L+  Y++ G      +V + +   +++SWN
Sbjct: 916  GTDDLELGKQVHGIAVKSGLDSDVS-VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWN 974

Query: 369  MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIK 427
             +IS  A+  + +E++ L + +   GL PD F++AS L AC + +  L +  QIH H +K
Sbjct: 975  SMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALK 1034

Query: 428  I-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
              +  D FV ++LID+YSK G    A  LF+      +  WN+M+ G+    +  +A+ L
Sbjct: 1035 TGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALEL 1094

Query: 487  FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
            F  ++ +  + D++T  TA +AC  +  L++GK +H   I  G   D+++++ + DMY K
Sbjct: 1095 FSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIK 1154

Query: 547  CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            CGD+  A  VF+ +S  + V+W++MI     +G  + A  ++ +M  S + P+E TF  +
Sbjct: 1155 CGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATL 1214

Query: 607  LWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
            + A S   ++E+G+  + N +++  V  D      +VD+ ++ G+IE A+++   M    
Sbjct: 1215 IKASSCVTALEQGRQLHANVIKLDCVS-DPFVGTSLVDMYAKCGNIEDAYRLFKKMNV-R 1272

Query: 666  NGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
            N ++W A+L G   H   +    + K +   G
Sbjct: 1273 NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 1304



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 32/340 (9%)

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK  H +I+  G   ++ +L   L+  Y++CG +S   +V     ER++++WN ++  YA
Sbjct: 640 GKCTHARIVVSGSAGDH-FLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698

Query: 376 -----RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
                  G ++E L L   ++         ++A  L  C N G L     +HG+ IKI  
Sbjct: 699 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 758

Query: 431 K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           + D FV  +L+++YSKCG    A LLF+ ++++ VV+WN M+ G+ Q G   EA  LF +
Sbjct: 759 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 818

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
            + + L  DE +    +   S +   ++GKW+  ++ +Y  +  +  D    D++     
Sbjct: 819 FHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQAYAAKLSLSDDNP--DVFCWNKK 875

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L       D        +W A I+C+     LN             I  + VT + +L A
Sbjct: 876 LSECLWAGD--------NWGA-IECFVNMNGLN-------------IDYDAVTLLVVLAA 913

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
            + +  +E GK         G++ D+     +V++ S+ G
Sbjct: 914 VAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 953



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 145/298 (48%), Gaps = 25/298 (8%)

Query: 414 SLQLGLQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           +L LG   H   V+     D F+ ++L+ MYSKCG  + A  +F+   ++ +V WN+++ 
Sbjct: 636 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 695

Query: 473 GFY-----QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
            +       +GN+ E ++LF  +  +      +T    ++ C N G L   + VH   I 
Sbjct: 696 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 755

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            G+  D+++  AL ++Y+KCG ++ A+ +FD M ER+VV W+ M+  Y   G   +A  L
Sbjct: 756 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 815

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
           F +   SG++P+E +   IL   S   + +EGK+         +   +Q YA  + L   
Sbjct: 816 FSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKW---------LADQVQAYAAKLSLSDD 865

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGAL-----LNGCRIHKRIDVMKTIEKELSVTGTND 700
           + D+    K +    +   G  WGA+     +NG  I    D +  +    +V GT+D
Sbjct: 866 NPDVFCWNKKLSECLWA--GDNWGAIECFVNMNGLNID--YDAVTLLVVLAAVAGTDD 919


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 208/669 (31%), Positives = 351/669 (52%), Gaps = 19/669 (2%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI-QTSILCTYGEFGCL 146
           ++     N  Y  +L+ C+    L  G K+H   +K      ++I    I+  Y      
Sbjct: 36  KQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSP 95

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            DA+  FD +  R++ SW+ ++A++  +    E L+    M ++GV PD VT ++   +C
Sbjct: 96  GDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSC 155

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK-RCTTSW 265
           G+  SLR    IH  V+  +++ID  + N+ + MY KCG L  A+R F K+E+ R   SW
Sbjct: 156 GDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISW 215

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           + M   +   G   +AL  F  ML +  +     ++T+L +C+    +++G+ +H  I  
Sbjct: 216 SIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIAL 275

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE--RNILSWNMLISEYARKGMSKEA 383
            G   E   +  A++  Y  CG + E  KV  A+ E  R+++SWN+++S Y      K+A
Sbjct: 276 SGFESEL-LVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDA 334

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDM 442
           ++L  +MQ   L  D  +  S LSAC +   + LG  +H  ++  +  K+  V ++L+ M
Sbjct: 335 IQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSM 391

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-------LNCL 495
           Y+KCG    A  +F++++Q+S++ W ++I  + +     EA +LF QM           +
Sbjct: 392 YAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 451

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + D + F+T + AC+++  LE+GK V  +  S G+  D  + TA+ ++Y KCG+++  +R
Sbjct: 452 KPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRR 511

Query: 556 VFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           +FD +  R +V  W+AMI  Y   GQ ++A  LF +M   G++P+  +F++IL ACSH+G
Sbjct: 512 IFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTG 571

Query: 615 SVEEGKFYFNAMRI--FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
             ++GK YF +M      V   +QH+ C+ DLL R G ++ A + +  +P   +   W +
Sbjct: 572 LEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTS 631

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  CR H+ +   K +  +L          Y  LSNIYAE   W    KVR  M   G+
Sbjct: 632 LLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGV 691

Query: 733 KKVPGYSTI 741
           KK  G STI
Sbjct: 692 KKERGVSTI 700



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 278/569 (48%), Gaps = 49/569 (8%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM-WAVLI 67
           +LR   R+H  ++ + L  DP  S  L+  Y + GSL  ++ VF   +   + + W+++ 
Sbjct: 160 SLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMA 219

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             +  +    E++  +  M+      +     ++L ACSS   +  G  +H  I   GF+
Sbjct: 220 GAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFE 279

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVVSWSSIIASYFDNADVSEGLKMFH 185
            + ++  +++  YG  G +++ARKVFD M    RDVVSW+ ++++Y  N    + ++++ 
Sbjct: 280 SELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQ 339

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M    +  D VT +SL  AC     +   R +H  ++  +++ +  +GN+ + MY+KCG
Sbjct: 340 RM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCG 396

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-------EPNLI 298
               A   F K+E+R   SWT +IS Y R     +A   F +MLE+++       +P+ +
Sbjct: 397 SHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 456

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
             +T+L +CA +  L +GK V  Q    G+  +   +G A++  Y +CG++ E  ++   
Sbjct: 457 AFVTILNACADVSALEQGKMVSEQAASCGLSSD-KAVGTAVVNLYGKCGEIEEGRRIFDG 515

Query: 359 IGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  R ++  WN +I+ YA+ G S EAL+L  +M+  G+ PDSFS  S L AC +      
Sbjct: 516 VCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHT----- 570

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           GL+  G            +S    M ++  ++N+          +++  +  +     + 
Sbjct: 571 GLEDQG------------KSYFTSMTTE--YRNVT---------RTIQHFGCVADLLGRG 607

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR-KDIYI 536
           G   EA     ++    ++ D V + + + AC N   L++ K V +KL+    R    Y+
Sbjct: 608 GRLKEAEEFLEKLP---VKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYV 664

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNV 565
             AL+++YA+        +V   M+E+ V
Sbjct: 665 --ALSNIYAELQKWHAVAKVRKFMAEQGV 691



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/611 (23%), Positives = 289/611 (47%), Gaps = 50/611 (8%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++  YA   S   ++  FD  ++ + + W  L+  +  +   +E++    +M ++     
Sbjct: 85  IVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPD 144

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              + + L +C     L  G ++H  ++    + D  +  ++L  Y + G L  A++VF 
Sbjct: 145 AVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 204

Query: 155 KM-TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           KM  +R+V+SWS +  ++  + +V E L+ F  M+  G++     M+++  AC     ++
Sbjct: 205 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 264

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK--RCTTSWTAMISC 271
             R IH  +     + +  + N+ + MY +CG +  A + F  +++  R   SW  M+S 
Sbjct: 265 DGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSA 324

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y  +   + A++ + +M   +   + +T +++L +C+    +  G+ +H QI+   +   
Sbjct: 325 YVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 381

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM- 390
              +G AL+  YA+CG  +E   V   + +R+I+SW  +IS Y R+ +  EA  L  QM 
Sbjct: 382 V-IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQML 440

Query: 391 ------QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMY 443
                  +  + PD+ +  + L+AC +V +L+ G  +           D+ V ++++++Y
Sbjct: 441 ELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLY 500

Query: 444 SKCGFKNLAYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
            KCG       +F+ +  +  V +WN+MI  + Q G S EA+ LF +M +  +  D  +F
Sbjct: 501 GKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSF 560

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           ++ + ACS+ G  ++GK       SY         T++T  Y                  
Sbjct: 561 VSILLACSHTGLEDQGK-------SYF--------TSMTTEYRNV--------------T 591

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           R +  +  + D  G  G+L +A    +++    +KP+ V + ++L AC +   ++  K  
Sbjct: 592 RTIQHFGCVADLLGRGGRLKEAEEFLEKL---PVKPDAVAWTSLLAACRNHRDLKRAKEV 648

Query: 623 FNAMRIFGVEP 633
            N  ++  +EP
Sbjct: 649 AN--KLLRLEP 657


>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
 gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 692

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 212/681 (31%), Positives = 361/681 (53%), Gaps = 12/681 (1%)

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLG-SGEKVHGRIIK 123
           L+K  +        I ++  ++R   T ++F     L+A + S        E+V   + K
Sbjct: 19  LLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTK 78

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G D+   ++TS+L  Y + GC+  A+ +FD+M  RD V W+++I  Y  N    +  K+
Sbjct: 79  SGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKL 138

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M+++G  P   T+++L   CG+   +   RS+HG   +  +++D  + N+ I  YSK
Sbjct: 139 FIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSK 198

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           C +L SAE  F +++ + T SW  MI  Y++SG  ++A+  F  M E   E + +T+I +
Sbjct: 199 CAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL 258

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +          + +HC +++ GM  +   +  +L+  Y+ CG +   E++  +  + +
Sbjct: 259 LSAHV------SHEPLHCLVVKCGMVNDISVV-TSLVCAYSRCGCLVSAERLYASAKQDS 311

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           I+    ++S YA KG    A+    + +   +  D+ ++   L  C     + +G+ +HG
Sbjct: 312 IVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHG 371

Query: 424 HVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           + IK   C    V + LI MYSK         LFE++Q+  ++ WNS+I G  Q+G +  
Sbjct: 372 YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAST 431

Query: 483 AINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           A  +FHQM L   L  D +T  + +  CS +  L  GK +H   +      + ++ TAL 
Sbjct: 432 AFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALI 491

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           DMYAKCG+   A+ VF S+      +W++MI  Y + G  + A S + +M + G+KP+E+
Sbjct: 492 DMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEI 551

Query: 602 TFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           TF+ +L AC+H G V+EGK  F AM + FG+ P LQHYA MV LL R+     A  +I  
Sbjct: 552 TFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWK 611

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           M    + ++WGALL+ C IH+ ++V + + +++ +    + G Y L+SN+YA E  WD+ 
Sbjct: 612 MDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDV 671

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
            +VR++M+  G     G S I
Sbjct: 672 VRVRNMMKDNGYDGYLGVSQI 692



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 266/517 (51%), Gaps = 9/517 (1%)

Query: 12  KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           ++ ++  HL  +GL       T L+  Y + G + S++++FD   E D+ +W  LI  Y 
Sbjct: 68  QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            N +  ++  L+  M+++  + S     ++L  C   G +  G  VHG   K G + D  
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           ++ +++  Y +   L  A  +F +M  +  VSW+++I +Y  +    E + +F +M  + 
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           VE   VT+++L  A     S  P   +H  V++  +  D  +  S +  YS+CG L+SAE
Sbjct: 248 VEISPVTIINLLSA---HVSHEP---LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R +   ++      T+++SCY   G    A+  F K  ++  + + + L+ +L  C    
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +  G S+H   I+ G+  +   +   LI  Y++   +     +   + E  ++SWN +I
Sbjct: 362 HIDIGMSLHGYAIKSGLCTK-TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVI 420

Query: 372 SEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           S   + G +  A E+  QM  T GL+PD+ ++AS L+ C  +  L LG ++HG+ ++ + 
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF 480

Query: 431 KDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           ++E FV ++LIDMY+KCG +  A  +F+ I+      WNSMI G+  +G    A++ + +
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLE 540

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           M    L+ DE+TFL  + AC++ G +++GK     +I
Sbjct: 541 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMI 577


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 219/727 (30%), Positives = 361/727 (49%), Gaps = 4/727 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA     GL  +    T L+  Y   G +  +R +F    E +   W  L+     N +
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE++  Y +M RE    +   + +V+  C SL +   G +V   +I  G      +  S
Sbjct: 126 LEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANS 185

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  +G  G + DA K+FD+M   D +S +++I+ Y      S+   +F  M   G+ PD
Sbjct: 186 LITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPD 245

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ SL   C           IH   LR  +     + N+ + MYS  G L  AE  F 
Sbjct: 246 ATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + +R   SW  MIS Y ++     AL++  ++    E PN +T  + LG+C+  G L +
Sbjct: 306 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALID 365

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH  +++  +      +G +LI  Y +C  M + EKV  ++   +++S+N+LI  YA
Sbjct: 366 GKMVHAIVLQLSLQRNL-LVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-LGLQIHGHVIKID-CKDE 433
                 +A+++   +++ G+ P+  ++ +   +  +   L   G  +H ++I+     DE
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDE 484

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           +V +SLI MY+KCG    +  +F  I  K++V WN++I    Q G+  EA+ LF  M   
Sbjct: 485 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHA 544

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
             ++D V     + +C+++  LE+G  +H   +  G+  D Y+  A  DMY KCG +   
Sbjct: 545 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEM 604

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
            ++    + R    W+ +I  Y  +G   +A   FKQM+  G KP+ VTF+ +L ACSH+
Sbjct: 605 LQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHA 664

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V++G  Y+N+M   FGV P ++H  C+VDLL R G    A + I  MP   N  IW +
Sbjct: 665 GLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRS 724

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL+  R HK +++ +   K+L      D+  Y LLSN+YA    W +  K+RS M+   +
Sbjct: 725 LLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTINI 784

Query: 733 KKVPGYS 739
            K P  S
Sbjct: 785 NKRPACS 791



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 289/596 (48%), Gaps = 8/596 (1%)

Query: 87  IREQAT-ISNFIYPSVLRACSSLG---DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +RE+   +S F   S++ AC   G    +  G  +H    + G   +  I T++L  YG 
Sbjct: 32  MRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGS 91

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G + DAR++F +M  R+VVSW++++ +   N  + E L+ +  M REGV  +     ++
Sbjct: 92  RGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATV 151

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
              CG L +  P   +  HV+   ++    + NS I M+   G +  AE+ F ++E+  T
Sbjct: 152 VSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDT 211

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            S  AMIS Y+  G   K    F  M      P+  TL +++  CA       G  +H  
Sbjct: 212 ISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSL 271

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            +R  +      +  AL+  Y+  GK+S+ E +   +  R+++SWN +IS Y +   S +
Sbjct: 272 CLRSSLDSSVTVIN-ALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTD 330

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           AL+ L Q+     +P+  + +S+L AC + G+L  G  +H  V+++   ++  V +SLI 
Sbjct: 331 ALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLIT 390

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY KC     A  +F+ +    VV +N +I G+    +  +A+ +F  +    ++ + +T
Sbjct: 391 MYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYIT 450

Query: 502 FLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            +    + ++   L   G+ +H  +I  G   D Y+  +L  MYAKCG+L+++  +F+S+
Sbjct: 451 MINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI 510

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           + +N+VSW+A+I      G   +A  LF  M  +G K + V     L +C+   S+EEG 
Sbjct: 511 TNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGM 570

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                    G++ D       +D+  + G +    +M+           W  L++G
Sbjct: 571 QLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQ-QCWNTLISG 625



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 4/298 (1%)

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQL 417
           +R   +W   +S   R G    A ELL  M+  G+    F++AS ++AC   G    +  
Sbjct: 3   DRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 418 GLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G  IH    +     + ++ ++L+ +Y   G  + A  LF  + +++VV W +++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG   E +  + QM    +  +   F T +  C ++     G  V   +I  G++  + +
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             +L  M+   G +Q A+++FD M E + +S +AMI  Y   G  +    +F  M   G+
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           +P+  T  +++  C+ +     G    +      ++  +     +V++ S +G +  A
Sbjct: 243 RPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 227/789 (28%), Positives = 400/789 (50%), Gaps = 53/789 (6%)

Query: 3   LFRSCT-----NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + +SC+     NL K   LH++++  G       S  L+  YA+ G L     +FD F  
Sbjct: 43  ILKSCSALLASNLGKC--LHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGR 100

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI--SNFIYPSVLRACSSLGDLGSGE 115
            D  +W +++  Y  +   +  ++   + +     +  S+    +VL  C+  G+L  G+
Sbjct: 101 CDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGK 160

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD-DARKVFDKMTSRDVVSWSSIIASYFDN 174
            VHG +IK GF+ D     +++  Y + G +  DA  VFD +  +DVVSW+++IA   +N
Sbjct: 161 SVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAEN 220

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG---ELCSLRPARSIHGHVLR-RKIKID 230
             + E   +F  M++  V+P++ T+ ++   C    E  + R  R IH +VL+  ++  D
Sbjct: 221 GLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSAD 280

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             + N+ +  Y K G    AE  F  ++ R   SW  +I+ Y  +G + K+L  F  ++ 
Sbjct: 281 VSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVS 340

Query: 291 VKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
           ++    + +T++++L +CA L  L+ GK VH  I+R     E    G AL+ FYA+CG +
Sbjct: 341 LEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYI 400

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
            E       I  ++++SWN ++  +  K      L LL  M    + PDS ++ + +  C
Sbjct: 401 EEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFC 460

Query: 410 GNVGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCG--------FKNL------ 451
            ++  ++   +IHG+ I+    +      V ++++D YSKCG        F+NL      
Sbjct: 461 ASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNL 520

Query: 452 ------------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
                             A ++F  + +  +  WN M+  + +N    +A+ LF ++   
Sbjct: 521 VTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQ 580

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            ++ D VT ++ I  C+ +  +   +  H  +I     +D+++   L D YAKCG +  A
Sbjct: 581 GMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIGYA 639

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
            ++F S  ++++V ++AMI  Y MHG    A   F  ML+ GIKP+ V F +IL ACSH+
Sbjct: 640 YKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHA 699

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G + EG   F+++ +I G++P ++ +AC+VDLL+R G +  A+  +  +P  AN +IWG 
Sbjct: 700 GRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGT 759

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C+ +  +++ + +  +L     ND G Y +LSN+YA +  WD   +VR +M    L
Sbjct: 760 LLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDL 819

Query: 733 KKVPGYSTI 741
           KK  G S I
Sbjct: 820 KKPAGCSWI 828



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 352/727 (48%), Gaps = 66/727 (9%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATI--SNFIYPSVLRACSSLGDLGSGEKVHGR 120
           WA  I+    ++   E++  +H  +++ A     + +  ++L++CS+L     G+ +H  
Sbjct: 3   WASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSY 62

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF----DNAD 176
           ++K G     V   ++L  Y + G LDD  K+FD+    D V W+ +++ Y     ++AD
Sbjct: 63  VVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDAD 122

Query: 177 VSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           V   +K+F +M   G V P  VT+ ++   C    +L   +S+HG+V++   ++D   GN
Sbjct: 123 V---MKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGN 179

Query: 236 SFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           + + MY+KCG +   A   F  I  +   SW AMI+    +G  ++A   F  M++   +
Sbjct: 180 ALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVK 239

Query: 295 PNLITLITVLGSCAGLG---WLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGK 348
           PN  T+  +L  CA        R G+ +H  +++    PE      +  AL+ FY + G+
Sbjct: 240 PNYATVANILPVCASFDENIAHRCGRQIHSYVLQ---WPELSADVSVCNALLSFYLKVGR 296

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL---LVQMQTWGLMPDSFSVASS 405
             E E +  A+  R+++SWN +I+ YA  G   ++L +   LV ++   L+ DS ++ S 
Sbjct: 297 TKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEM--LLLDSVTMVSI 354

Query: 406 LSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
           L AC  + +LQ G Q+H ++++     +D    ++L+  Y+KCG+   AY  F  I +K 
Sbjct: 355 LPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKD 414

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           ++ WNS++  F +  +    ++L H M    +  D VT LT I  C+++ +++K K +H 
Sbjct: 415 LISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHG 474

Query: 524 KLISYG---VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVV------------- 566
             I  G         +  A+ D Y+KCG+++ A ++F ++SE RN+V             
Sbjct: 475 YSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLG 534

Query: 567 ------------------SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
                             +W+ M+  Y  +     A  LF ++   G+KP+ VT M+++ 
Sbjct: 535 SHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIP 594

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
            C+   SV   +   +   I     DL     ++D  ++ G I  A+K+  S     +  
Sbjct: 595 VCTQMASVHLLR-QCHGYIIRSSFEDLHLKGTLLDAYAKCGIIGYAYKIFQS-SVDKDLV 652

Query: 669 IWGALLNGCRIHKRID-VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV-RSI 726
           ++ A++ G  +H   +  ++T    L++    D+  +T + +  +  G   E  K+  SI
Sbjct: 653 MFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSI 712

Query: 727 MEVTGLK 733
            ++ G+K
Sbjct: 713 EKIHGMK 719



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 267/539 (49%), Gaps = 34/539 (6%)

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGV--EPDFVTMLSLAEACGELCSLRPARSIH 219
           ++W+S I S   ++  +E L  FH  +++    +PD   + ++ ++C  L +    + +H
Sbjct: 1   MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
            +V+++          + + MY+KCG L    + F +  +     W  ++S Y+RSG   
Sbjct: 61  SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND 120

Query: 280 KALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLG 336
             +    + +    E  P+ +T+ TVL  CA  G L  GKSVH  +I+ G   E D + G
Sbjct: 121 ADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGF--EMDTFAG 178

Query: 337 PALIEFYAECGKMS-ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            AL+  YA+CG ++ +   V  +I  ++++SWN +I+  A  G+ KEA  L   M    +
Sbjct: 179 NALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSV 238

Query: 396 MPDSFSVASSLSACGNVG---SLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKN 450
            P+  +VA+ L  C +     + + G QIH +V++      D  V ++L+  Y K G   
Sbjct: 239 KPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTK 298

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQAC 509
            A  LF  +  + +V WN++I G+  NG  L+++++F  +  L  L +D VT ++ + AC
Sbjct: 299 EAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPAC 358

Query: 510 SNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           + +  L+ GK VH  ++ +  + +D     AL   YAKCG ++ A   F  +S ++++SW
Sbjct: 359 AQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISW 418

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS-----------HSGSVE 617
           ++++D +G     +   SL   ML   I+P+ VT + I+  C+           H  S+ 
Sbjct: 419 NSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIR 478

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            G        +    P + +   ++D  S+ G+IE A KM  ++    N     +L++G
Sbjct: 479 SGSL------LCATAPTVGN--AILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISG 529


>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 919

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 231/743 (31%), Positives = 375/743 (50%), Gaps = 35/743 (4%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           +K   +H   + TGL  D      L+  YA+   L S+  VF   +  D   W  ++   
Sbjct: 195 KKCPMVHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKC 254

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
           + N +   S++ +  MI       N  +  V+ ACS L +L  GE +HG +IK G+  + 
Sbjct: 255 LANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEA 314

Query: 131 --VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
              +  SI+  Y + G ++ A  VF+++  +DV+SW++I+     N    E   +   M 
Sbjct: 315 HVSVANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQ 374

Query: 189 R-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVMYSKCGD 246
             + ++PD  T++S+   CG+ C  R  R+IHG+ +RR+++     + NS I MY KCG 
Sbjct: 375 SVDKIQPDISTVVSITSICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGL 434

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE--VKEEPNLITLITVL 304
              AE  F     R   SW +MIS + ++G+ Q+A   F +++      + +L T++ +L
Sbjct: 435 TTQAEFLFKTTTHRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAIL 494

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RN 363
            SC     L  GKSVHC                    +  + G ++    ++  I E R+
Sbjct: 495 TSCDSSDSLIFGKSVHC--------------------WLQKLGDLTSAFLLLEMIFETRD 534

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + SWN +I   A  G   E+L     M   G +  D  ++  ++SA GN+  +  G  +H
Sbjct: 535 LTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLH 594

Query: 423 GHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G  IK +   D  +Q++LI MY +C     A  +F  I   ++  WN +I    QN    
Sbjct: 595 GLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGR 654

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           E   LF  + L   E +E+TF+  + A + +G    G   H  LI  G + + ++  AL 
Sbjct: 655 EVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 711

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML--DSGIKPN 599
           DMY+ CG L+T  +VF +   +++ +W+++I  YG HG    A  LFK+M   +SG++PN
Sbjct: 712 DMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYGFHGMGEKAMELFKEMSSGNSGMEPN 771

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           + TF+++L ACSHSG + EG  Y+N M   FGV+P  +H  C+VD+L R+G ++ A++ I
Sbjct: 772 KSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKPVTEHRVCIVDMLGRAGKLKEAYEFI 831

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
             +  P    +WGALL+ C  H    +   + + L     ++  YY  L+N Y   G WD
Sbjct: 832 IGIGEPQKAGVWGALLSACNYHGDTKLGTEVAEVLFEMEPDNASYYISLANTYVGLGGWD 891

Query: 719 EFGKVRSIMEVTGLKKVPGYSTI 741
           E  ++R I+E   LKK+PGYS I
Sbjct: 892 EAVRLRKIVEDNALKKLPGYSVI 914



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 191/707 (27%), Positives = 335/707 (47%), Gaps = 39/707 (5%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   L  G   D   S++L+  Y   G L SS  +F   KE D  +W  +I C   N  
Sbjct: 99  IHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGR 158

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK---VHGRIIKCGFDKDDVI 132
           +  ++ L+ +MI +    + F   ++L A S+L  L   +K   VH   I+ G   D  +
Sbjct: 159 YIAAVGLFVEMIHKG---NEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSL 215

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y +   L  A  VF  M  RD+VSW++I+     N      L  F SM+  G 
Sbjct: 216 CNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQ 275

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG--PLGNSFIVMYSKCGDLLSA 250
           E D VT   +  AC  L  L    S+HG V++     +    + NS I MYSKCGD+ +A
Sbjct: 276 EADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAA 335

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEPNLITLITVLGSCAG 309
           E  F ++  +   SW A+++  + +G F++A     +M  V K +P++ T++++   C  
Sbjct: 336 ETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGD 395

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
               REG+++H   +R+ M      +  ++I+ Y +CG  ++ E +      R+++SWN 
Sbjct: 396 FCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNS 455

Query: 370 LISEYARKGMSKEALELLVQMQT-WGLMPDSFS-VASSLSACGNVGSLQLGLQIHGHVIK 427
           +IS +A+ G ++EA  L  ++ + +     S S V + L++C +  SL  G  +H  + K
Sbjct: 456 MISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK 515

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINL 486
           +            D+ S       A+LL E I + + +  WNS+I G   +G+ LE++  
Sbjct: 516 LG-----------DLTS-------AFLLLEMIFETRDLTSWNSVIYGCASSGHHLESLRA 557

Query: 487 FHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           F  M     +  D +T L  I A  N+  + +G+ +H   I      D  +   L  MY 
Sbjct: 558 FQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYG 617

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           +C D ++A +VF  +S+ N+ SW+ +I     +    +   LF+ +    ++PNE+TF+ 
Sbjct: 618 RCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVG 674

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           +L A +  GS   G      +   G + +    A +VD+ S  G +E   K+  +    +
Sbjct: 675 LLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKS 734

Query: 666 NGSIWGALLNGCRIH----KRIDVMKTIEKELSVTGTNDNGYYTLLS 708
             S W ++++    H    K +++ K +    S    N + + +LLS
Sbjct: 735 I-SAWNSVISAYGFHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLS 780



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 169/635 (26%), Positives = 297/635 (46%), Gaps = 46/635 (7%)

Query: 46  RSSRLVFDTFKEPDSFMWAVL--IKCYMWNNFFEESILLYHKMIREQATI-SNFIY-PSV 101
           RSS   F   K    F  +VL  +   ++N F E          R+  T+ ++F++   V
Sbjct: 31  RSSNFHFSKIKHERHFTSSVLSPVTPSVYNLFDEMPK-------RDNRTVEASFMFLRDV 83

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR+     +  +   +H   +KCGF +D    + +L  YG  G L  +  +F ++  +DV
Sbjct: 84  LRSFMMRIETETPRSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDV 143

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           + W+S+I     N      + +F  M+ +G E D  T+L    A   L   +    +H  
Sbjct: 144 IVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALSSLHLSKKCPMVHCL 203

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
            +   +  D  L N+ + +Y+K  DL SAE  F  +E R   SW  +++    +G+ + +
Sbjct: 204 AIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNS 263

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE-YDYLGPALI 340
           L  F  M+   +E + +T   V+ +C+ L  L  G+S+H  +I+ G  PE +  +  ++I
Sbjct: 264 LIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSII 323

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDS 399
             Y++CG +   E V   +  ++++SWN +++  +  GM +EA  +L +MQ+   + PD 
Sbjct: 324 SMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDI 383

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFE 457
            +V S  S CG+    + G  IHG+ ++ + +   ++  +S+IDMY KCG    A  LF+
Sbjct: 384 STVVSITSICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFK 443

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMDEVTFLTAIQACSNIGQL 515
               + +V WNSMI  F QNG + EA NLF ++     C +    T L  + +C +   L
Sbjct: 444 TTTHRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSSDSL 503

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDC 574
             GK VH  L                    K GDL +A  + + + E R++ SW+++I  
Sbjct: 504 IFGKSVHCWL-------------------QKLGDLTSAFLLLEMIFETRDLTSWNSVIYG 544

Query: 575 YGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVEEGK----FYFNAMRIF 629
               G   ++   F+ M   G I+ + +T +  + A  +   V +G+        ++R  
Sbjct: 545 CASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLR-- 602

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
             E D Q    ++ +  R  D E A K+   +  P
Sbjct: 603 --ELDTQLQNTLITMYGRCKDTESAVKVFGLISDP 635


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 206/651 (31%), Positives = 358/651 (54%), Gaps = 20/651 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKM 156
           Y   LR C    DL S  ++H RI   G    +V +   I+  YG+ G +  AR  FD +
Sbjct: 30  YRDALRQCQ---DLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARVAFDAI 84

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             ++  SW S++ +Y  N      L ++  M    ++P+ V   ++  AC  + +L   +
Sbjct: 85  ARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGK 141

Query: 217 SIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-KRCTTSWTAMISCYNR 274
           +IH  +   K +K+D  L NS + MY+KCG L  A+R F ++  +R  +SW AMI+ Y +
Sbjct: 142 AIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQ 201

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           SG F++A+  +  M     EP++ T  +VL +C+ LG L +G+ +H  I  +G   E D 
Sbjct: 202 SGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT--ELDL 256

Query: 335 -LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            L  AL+  YA C  + +  K+   +  R+++SW+ +I+ +A   +  EA+E   +MQ  
Sbjct: 257 SLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE 316

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLA 452
           G+ P+ ++ AS L AC +VG L+ G  +H  ++    K   V  ++L+D+Y+  G  + A
Sbjct: 317 GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEA 376

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSN 511
             LF++I+ +   +W  +I G+ + G+    + L+ +M     +   ++ +   I AC++
Sbjct: 377 RSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACAS 436

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G     +  H  + + G+  D  + T+L +MY++ G+L++A++VFD MS R+ ++W+ +
Sbjct: 437 LGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTL 496

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FG 630
           I  Y  HG+   A  L+K+M   G +P+E+TFM +L+ACSH+G  E+GK  F +++  + 
Sbjct: 497 IAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYA 556

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           + P++ HY+C++DLLSR+G +  A ++I++MP   N   W +LL   RIHK +       
Sbjct: 557 MHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAA 616

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +++     D   Y LLSN++A  GN      VR+ M   G+KK  G S I
Sbjct: 617 GQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWI 667



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 308/595 (51%), Gaps = 16/595 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            R C +L  + ++H  +       +      ++ +Y + GS+ S+R+ FD     + + W
Sbjct: 34  LRQCQDLESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSW 92

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             ++  Y  N  +  ++ LY +M  +   +   +Y +VL AC+S+  L  G+ +H RI  
Sbjct: 93  GSMLTAYAQNGHYRAALDLYKRMDLQPNPV---VYTTVLGACASIEALEEGKAIHSRISG 149

Query: 124 C-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGL 181
             G   D +++ S+L  Y + G L+DA+++F++M+  R V SW+++IA+Y  +    E +
Sbjct: 150 TKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAI 209

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           +++  M    VEP   T  S+  AC  L  L   R IH  +  R  ++D  L N+ + MY
Sbjct: 210 RLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMY 266

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           ++C  L  A + F ++ +R   SW+AMI+ +  +  F +A+E + KM      PN  T  
Sbjct: 267 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFA 326

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIG 360
           +VL +CA +G LR G++VH QI+  G G +   + G AL++ Y   G + E   +   I 
Sbjct: 327 SVLLACASVGDLRAGRAVHDQIL--GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 384

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS-SLSACGNVGSLQLGL 419
            R+   W +LI  Y+++G     LEL  +M+    +P +  + S  +SAC ++G+     
Sbjct: 385 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 444

Query: 420 QIHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H  +       +FV  +SL++MYS+ G    A  +F+++  +  + W ++I G+ ++G
Sbjct: 445 QAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHG 504

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYID 537
               A+ L+ +M L   E  E+TF+  + ACS+ G  E+GK +   + S Y +  +I   
Sbjct: 505 EHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHY 564

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           + + D+ ++ G L  A+ + ++M  E N V+WS+++    +H  +  A     Q+
Sbjct: 565 SCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQI 619


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 199/682 (29%), Positives = 374/682 (54%), Gaps = 19/682 (2%)

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRA---------CSSLGDLGSGEKVHGRI 121
           ++ N    +++++ ++++     + F +  +++A         C S   L    ++  + 
Sbjct: 24  LFQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQC 82

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K G ++   + TS++  Y + G    AR +FD+M+ RDVVSW+ +I  Y  N  +   +
Sbjct: 83  LKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAI 142

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  M+RE  +P+  T++SL  +CG    +   RSIHG  ++    +D  L N+ + MY
Sbjct: 143 QLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMY 202

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KC DL +++  F +++++   SW  MI  Y ++G F KA+  F +ML+    P+ +T++
Sbjct: 203 AKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIM 262

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            ++ + A        ++VHC +++ G   +   +  +L+  YA+ G  +  +++      
Sbjct: 263 NLVSANA------FPENVHCYVVKCGFTNDASVV-TSLVCLYAKQGFTNTAKQLYKYYPT 315

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           +++++   +IS Y+ KG  + A+E  +Q     + PD+ ++   L    N     +G   
Sbjct: 316 KDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTF 375

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           HG+ +K    ++  V + LI +YS+      A  LF  +++K ++ WNSMI G  Q G S
Sbjct: 376 HGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKS 435

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +A+ LF +M +   + D +T  + +  C  +G L  G+ +H  ++   VR + +I TAL
Sbjct: 436 SDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTAL 495

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMY+KCG L  A++VF ++ +  + +W+A+I  Y ++G  + A   + ++ + G+KP++
Sbjct: 496 IDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDK 555

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           +TF+ +L AC+H G V  G  YFN M + +G+ P LQHYAC+V LL + G  + A + I+
Sbjct: 556 ITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFIN 615

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            M    + ++WGALLN C I + + + + + K+L +    + G+Y L+SN+YA  G WD+
Sbjct: 616 KMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDD 675

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             +VR +M+ +G     G S I
Sbjct: 676 VARVREMMKDSGGDGCSGVSVI 697



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 285/577 (49%), Gaps = 12/577 (2%)

Query: 2   PLFRSCTNLRKLT--RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           P F  C +   L   ++    L  G++      T LI+ Y ++G    +R +FD     D
Sbjct: 62  PSFTHCPSTAALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRD 121

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W VLI  Y  N +   +I L+  M+RE    +     S+L +C     +  G  +HG
Sbjct: 122 VVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHG 181

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK GF  D  +  +++  Y +   L+ ++ +FD+M  + VVSW+++I  Y  N    +
Sbjct: 182 FGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDK 241

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  M++EG  P  VT+++L  A     +  P  ++H +V++     D  +  S + 
Sbjct: 242 AILYFKEMLKEGFHPSSVTIMNLVSA-----NAFP-ENVHCYVVKCGFTNDASVVTSLVC 295

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y+K G   +A++ +     +   + TA+IS Y+  G  + A+E F++ +++  +P+ + 
Sbjct: 296 LYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVA 355

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           LI VL           G + H   ++ G+  +   +   LI  Y+   ++     + + +
Sbjct: 356 LIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDC-LVANGLISLYSRFDEIEAALSLFYDM 414

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+ +++WN +IS   + G S +A+EL  +M   G  PD+ ++AS LS C  +G+L++G 
Sbjct: 415 REKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGE 474

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H ++++ + + ++F+ ++LIDMYSKCG  + A  +F  I+   +  WN++I G+   G
Sbjct: 475 TLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYG 534

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
               A   + ++    L+ D++TFL  + AC++ G +  G ++ +     YG+   +   
Sbjct: 535 LEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHY 594

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMID 573
             +  +  K G  + A    + M  + +   W A+++
Sbjct: 595 ACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLN 631


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 220/635 (34%), Positives = 348/635 (54%), Gaps = 19/635 (2%)

Query: 102 LRACSSLGDLGSGEKVHGRI-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           LRAC      G  +  HG   ++ G         ++L     FG    A KVF KM  RD
Sbjct: 114 LRAC------GHADAAHGTFGLRLG--------NAMLSMLVRFGETWHAWKVFAKMPERD 159

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
           V SW+ ++  Y     + E L ++H M+  G  PD  T   +  +CG +  L   R +H 
Sbjct: 160 VFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHA 219

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
           HVLR  + ++  + N+ + MY+KCGD+ +A + F  +      SW AMI+ +  +   + 
Sbjct: 220 HVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEA 279

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            LE F+ MLE + EPNL+T+ +V  +   L  L   K +H   +++G   +  +   +LI
Sbjct: 280 GLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCN-SLI 338

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
           + Y+  G+M E   V   +  R+ +SW  +IS Y + G   +ALE+   M+   + PD  
Sbjct: 339 QMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDV 398

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI 459
           +VAS+L+AC ++G L +G+++H     K   +   V ++L++MY+K      A  +F+ +
Sbjct: 399 TVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYM 458

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
             K V+ W+SMI GF  N  + EA+  F  M L  ++ + VTF+ A+ AC+  G L  GK
Sbjct: 459 PDKDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGK 517

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
            +H  ++  G+  + Y+  AL D+Y KCG    A   F +   ++VVSW+ M+  +  HG
Sbjct: 518 EIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHG 577

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHY 638
             + A S F +ML++G  P+EVTF+ +L  CS +G V +G   F++M   + + P+L+HY
Sbjct: 578 HGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHY 637

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
           ACMVDLLSR G +   +  I+ MP   + ++WGALLNGCRIH+ I++ +   K +     
Sbjct: 638 ACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEP 697

Query: 699 NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           ND GY+ LLS++YA+ G W E  KVR  M V GL+
Sbjct: 698 NDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLE 732



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 179/594 (30%), Positives = 304/594 (51%), Gaps = 11/594 (1%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF    E D F W V++  Y    F EE++ LYH+M+   A    + +P VLR+C  + D
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPD 210

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L  G +VH  +++ G   +  +  +++  Y + G ++ ARKVFD M+  D +SW+++IA 
Sbjct: 211 LTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAG 270

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +F+N +   GL++F  M+ + VEP+ +T+ S+  A G L  L  A+ IH   ++R    D
Sbjct: 271 HFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATD 330

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
               NS I MYS  G +  A   F ++E R   SWTAMIS Y ++G+  KALE +  M  
Sbjct: 331 VAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               P+ +T+ + L +CA LG L  G  +H     KG    Y  +  AL+E YA+   + 
Sbjct: 391 NNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGF-IRYIVVANALVEMYAKSKIIE 449

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +V   + +++++SW+ +I+ +     + EAL     M    + P+S +  ++L+AC 
Sbjct: 450 KAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSVTFIAALAACA 508

Query: 411 NVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
             GSL+ G +IH HV++     E +V ++L+D+Y KCG    A+  F     K VV WN 
Sbjct: 509 ATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNI 568

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-Y 528
           M+ GF  +G+   A++ F++M       DEVTF+  +  CS  G + +G  + H +   Y
Sbjct: 569 MLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKY 628

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASL 587
            +  ++     + D+ ++ G L       + M    +   W A+++   +H  +      
Sbjct: 629 SIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELA 688

Query: 588 FKQMLDSGIKPNEVTFMNILWAC-SHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
            K +L+  ++PN+  +  +L    + +G   E       MR+ G+E D   Y C
Sbjct: 689 AKIVLE--LEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHD---YGC 737



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 220/479 (45%), Gaps = 12/479 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC  +  LT    +HAH+L  GL  +      L+  YA+ G + ++R VFD     D
Sbjct: 201 VLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTD 260

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  N+  E  + L+  M+ ++   +     SV  A   L DL   +++H 
Sbjct: 261 CISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHA 320

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K GF  D     S++  Y   G + +A  VF +M +RD +SW+++I+ Y  N    +
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDK 380

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+++  M    V PD VT+ S   AC  L  L     +H     +       + N+ + 
Sbjct: 381 ALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVE 440

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMIS--CYNRSGWFQKALESFVKMLEVKEEPNL 297
           MY+K   +  A   F  +  +   SW++MI+  C+N   +  +AL  F  ML    +PN 
Sbjct: 441 MYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNF--EALYYFRHML-ADVKPNS 497

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T I  L +CA  G LR GK +H  ++R+G+  E  Y+  AL++ Y +CG+         
Sbjct: 498 VTFIAALAACAATGSLRCGKEIHAHVLRQGIASE-GYVPNALLDLYVKCGQTGYAWAQFG 556

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           A G ++++SWN++++ +   G    AL    +M   G  PD  +  + L  C   G +  
Sbjct: 557 AHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQ 616

Query: 418 GLQI-HGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
           G ++ H    K          + ++D+ S+ G     Y    R+       +W +++ G
Sbjct: 617 GWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNG 675


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 208/612 (33%), Positives = 342/612 (55%), Gaps = 4/612 (0%)

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  ++L     FG +  A +VF KM  RDV SW+ ++  Y     + E L +++ M+  G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           + PD  T   +   CG +   R  R +H HVLR     +  + N+ + MY+KCGD+++A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F  +      SW AMI+ +  +   +  LE F+ MLE + +PNL+T+ +V  +   L 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +   K +H   +++G   +  +   +LI+ Y   G+M +  K+   +  ++ +SW  +I
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCN-SLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI-KIDC 430
           S Y + G   +ALE+   M+   + PD  ++AS+L+AC  +G L +G+++H     K   
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           +   V ++L++MY+K    + A  +F+ + +K VV W+SMI GF  N  S EA+  F  M
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM 491

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            L  ++ + VTF+ A+ AC+  G L  GK +H  ++  G+  + Y+  AL D+Y KCG  
Sbjct: 492 -LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 550

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A   F   SE++VVSW+ M+  +  HG  + A SLF QM++ G  P+EVTF+ +L AC
Sbjct: 551 SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610

Query: 611 SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           S +G V +G   F+ M   F + P+L+HYACMVDLLSR G +  A+ +I+ MP   + ++
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           WGALLNGCRIH+ +++ +   K +     ND  Y+ LL ++Y + G W +  +VR  M  
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730

Query: 730 TGLKKVPGYSTI 741
            GL++  G S +
Sbjct: 731 KGLEQDNGCSWV 742



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 180/615 (29%), Positives = 312/615 (50%), Gaps = 18/615 (2%)

Query: 3   LFRSC-------TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF 55
           LFR C         +R   R  A     GL         ++      G +  +  VF   
Sbjct: 102 LFRLCEWRRAVDAGMRACARADAEHPSFGLRL----GNAMLSMLVRFGEIWHAWRVFAKM 157

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            E D F W V++  Y    F EE++ LY++M+        + +P VLR C  + D   G 
Sbjct: 158 PERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGR 217

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH  +++ GF  +  +  +++  Y + G +  ARKVFD M   D +SW+++IA +F+N 
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENH 277

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           +   GL++F +M+   V+P+ +T+ S+  A G L  +  A+ +HG  ++R   ID    N
Sbjct: 278 ECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCN 337

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S I MY+  G +  A + F ++E +   SWTAMIS Y ++G+  KALE +  M      P
Sbjct: 338 SLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSP 397

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +T+ + L +CA LG L  G  +H     KG    Y  +  AL+E YA+   + +  +V
Sbjct: 398 DDVTIASALAACACLGRLDVGIKLHELAQNKGF-IRYVVVANALLEMYAKSKHIDKAIEV 456

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              + E++++SW+ +I+ +     S EAL     M    + P+S +  ++LSAC   G+L
Sbjct: 457 FKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGAL 515

Query: 416 QLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G +IH +V++     E +V ++L+D+Y KCG  + A+  F    +K VV WN M+ GF
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 575

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKD 533
             +G    A++LF+QM       DEVTF+  + ACS  G + +G  + H +   + +  +
Sbjct: 576 VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPN 635

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +     + D+ ++ G L  A  + + M  + +   W A+++   +H  +       K +L
Sbjct: 636 LKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVIL 695

Query: 593 DSGIKPNEVTFMNIL 607
           +  ++PN+V +  +L
Sbjct: 696 E--LEPNDVAYHVLL 708


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 233/760 (30%), Positives = 372/760 (48%), Gaps = 70/760 (9%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F+ C++ + L    + HA +++T        +  LI+ Y +   L  +  VFD   + D
Sbjct: 48  IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRD 107

Query: 60  SFMWAVLIKCY-------MWNNFFEESI--------LLYHKMIREQATISNFIYPSVLRA 104
           +  W  ++  Y       +    F+           L   +M R         +  VL++
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKS 167

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           CSSL D G G ++HG  +K GFD D V  +++L  Y +  C+                  
Sbjct: 168 CSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC-CVQ----------------- 209

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
                    N D+  GL++F  M + GV                      A  +HGH L+
Sbjct: 210 ---------NDDLRGGLELFKEMQKAGV---------------------GALQLHGHALK 239

Query: 225 RKIKIDGPLGNSFIVMYSKCGDLLS-AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
                D  +G + + MY KC +L   + + F  +      S+ A+I  Y RS    +AL 
Sbjct: 240 TDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALG 299

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
            F  + +     + ++L     +CA +    EG  VH  +  K +      +  A+++ Y
Sbjct: 300 MFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVH-GLSMKSLCQSNICVANAILDMY 358

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            +CG + E   V   +  R+ +SWN +I+ + + G  ++ L L V M   G+ PD F+  
Sbjct: 359 GKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYG 418

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           S L AC    +L  G++IH  +IK     D FV  +LIDMYSKCG    A  L +R+ ++
Sbjct: 419 SVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ 478

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           +VV WN++I GF     S EA   F +M    ++ D  T+ T +  C+N+  +E GK +H
Sbjct: 479 TVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIH 538

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
            ++I   ++ D YI + L DMY+KCG++Q  Q +F+    R+ V+W+AM+  Y  HG   
Sbjct: 539 AQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGE 598

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
           +A  +F+ M    +KPN  TF+ +L AC H G VE+G  YF++M   +G++P L+HY+C+
Sbjct: 599 EALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCV 658

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           VD++ RSG +  A ++I  MPF A+  IW  LL+ C+IH  ++V +     +      D+
Sbjct: 659 VDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDS 718

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             Y LLSNIYA  G W+E  K+R +M   GLKK PG S I
Sbjct: 719 AAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 758



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 258/552 (46%), Gaps = 70/552 (12%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T   + + C +  +L P +  H  ++  + K    + N  I MY KC DL  A + F  +
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESF---------------VKMLEVKEEPNLITLIT 302
            +R T SW AM+  Y   G    A + F                +M  +    +  T   
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163

Query: 303 VLGSCAGL----------------GW-----------------------LREGKSVHCQI 323
           VL SC+ L                G+                       LR G  +  ++
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223

Query: 324 IRKGMGP--------EYDY-----LGPALIEFYAECGKMSEC-EKVIHAIGERNILSWNM 369
            + G+G         + D+     +G A ++ Y +C  +S+C  ++ +++   N+ S+N 
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I  YAR     EAL +   +Q  GL  D  S++ +  AC  +     GLQ+HG  +K  
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           C+    V ++++DMY KCG    A L+FE +  +  V WN++I    QNGN  + ++LF 
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            M  + +E DE T+ + ++AC+    L  G  +H+++I   +  D ++  AL DMY+KCG
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCG 463

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            ++ A+++ D ++E+ VVSW+A+I  + +  Q  +A   F +ML+ G+ P+  T+  IL 
Sbjct: 464 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 523

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
            C++  +VE GK     +    ++ D    + +VD+ S+ G+++  F++I       +  
Sbjct: 524 TCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD-FQLIFEKAPNRDFV 582

Query: 669 IWGALLNGCRIH 680
            W A++ G   H
Sbjct: 583 TWNAMVCGYAQH 594



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 210/484 (43%), Gaps = 81/484 (16%)

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T   +   C+    L  GK  H ++I     P   ++   LI+ Y +C  +    KV   
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTV-FVTNCLIQMYIKCSDLGFAFKVFDG 102

Query: 359 IGERNILSWNMLISEYARKGMSKEALELL---------------VQMQTWGLMPDSFSVA 403
           + +R+ +SWN ++  YA +G    A +L                 +M   G + D  + A
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFA 162

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNL----AYLLFE 457
             L +C ++     G+QIHG  +K+  DC D    S+L+DMY+KC  +N        LF+
Sbjct: 163 VVLKSCSSLEDHGGGIQIHGLAVKMGFDC-DVVTGSALLDMYAKCCVQNDDLRGGLELFK 221

Query: 458 RIQQKSV---------------------------------------VMWNSM-------- 470
            +Q+  V                                        ++NS+        
Sbjct: 222 EMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSY 281

Query: 471 ---ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI-GQLEKGKWVHHKLI 526
              I G+ ++   +EA+ +F  +  + L +DEV+   A +AC+ I G LE G  VH   +
Sbjct: 282 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE-GLQVHGLSM 340

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
               + +I +  A+ DMY KCG L  A  VF+ M  R+ VSW+A+I  +  +G      S
Sbjct: 341 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 400

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA--CMVDL 644
           LF  ML SG++P+E T+ ++L AC+   ++  G    N  RI      L  +    ++D+
Sbjct: 401 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHN--RIIKSRMGLDSFVGIALIDM 458

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI-DVMKTIEKELSVTGTNDNGY 703
            S+ G +E A K+ H          W A+++G  + K+  +  KT  K L +    DN  
Sbjct: 459 YSKCGMMEKAEKL-HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 517

Query: 704 YTLL 707
           Y  +
Sbjct: 518 YATI 521


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 193/525 (36%), Positives = 298/525 (56%), Gaps = 2/525 (0%)

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           I+  +L   ++  G L    +   S  G++  A + F K        W A++ CY+R G+
Sbjct: 94  IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGF 153

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           F  A+E + +M      P+  +   VL +C+ L  L  G+ VH QI R G   +  ++  
Sbjct: 154 FGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDV-FVQN 212

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L+  YA+CG++     V   + +R I+SW  +IS YA+ G   EAL +  +M+   + P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
           D  ++ S L A  +V  L+ G  IHG VIK+  + EF +  SL  +Y+KCG   +A L F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
            +++  S++ WN+MI G+ +NG + EAI LF  M    +  D +T  ++I AC+ IG LE
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
             +W+   +     R D+ ++T+L D YAKCG +  A+ VFD + +++VV WSAM+  YG
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
           +HGQ  ++  LF  M  +G+ PN+VTF+ +L AC +SG VEEG   F+ MR +G+EP  Q
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQ 512

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYAC+VDLL R+G ++ A+  + +MP     S+WGALL+ C+IH+ + + +   + L   
Sbjct: 513 HYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSL 572

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + G+Y  LSN+YA    WD   KVR +M   GL K  GYS I
Sbjct: 573 DPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVI 617



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 241/461 (52%), Gaps = 3/461 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           L +++A LLVTGL Y      +L+   + +G +  +R +FD F +PD F+W  +++CY  
Sbjct: 91  LNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSR 150

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           + FF  +I +Y +M     +   F +P VL+ACS+L  L  G +VHG+I + GF+ D  +
Sbjct: 151 HGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFV 210

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           Q  ++  Y + G +  A  VF ++  R +VSW+SII+ Y  N    E L++F  M +  V
Sbjct: 211 QNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNV 270

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            PD++ ++S+  A  ++  L   +SIHG V++  ++ +  L  S   +Y+KCG ++ A  
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++E      W AMIS Y ++G+ ++A+E F  M      P+ IT+ + + +CA +G 
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGS 390

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L   + +   I       +   +  +LI+ YA+CG +     V   I +++++ W+ ++ 
Sbjct: 391 LELARWMDEYISMSEFRNDV-IVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            Y   G  +E++ L   M+  G+ P+  +    L+AC N G ++ G  +   +     + 
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEP 509

Query: 433 EFVQ-SSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMI 471
                + ++D+  + G  + AY  +     +  V +W +++
Sbjct: 510 RHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALL 550


>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
          Length = 992

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 227/731 (31%), Positives = 387/731 (52%), Gaps = 12/731 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  L +G+  D   +   I  YA  G L SS  +F      +      +I   M +  
Sbjct: 265 LHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGA 324

Query: 76  FEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           +E++  ++ +++R +  + N +   S+L  CS+   +  GE VHG +IK G  +   + +
Sbjct: 325 WEKAFGVF-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVS 383

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G LD A  +F  +T +  + W+S+I+ Y  N   +  +     M  EGV+P
Sbjct: 384 ALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDP 443

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D +T++S+   C     L   +SIH + +R +++++  + N+ + MY+ CG L    + F
Sbjct: 444 DALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLF 503

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +E R   SW  +IS +  +G     L  F +M     + +L+TLI ++ S + +  + 
Sbjct: 504 HTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDIT 563

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+SVH   IR G   +   +  ALI  Y  CG +   EK+  ++   N +S+N L++ Y
Sbjct: 564 VGESVHSLAIRSGCNLDVS-VANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGY 622

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            +  + +E L L   M      P+  ++ + L  C +   LQ G  +H + I+   K E 
Sbjct: 623 RKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPICHS--QLQ-GKTVHSYAIRNFSKLET 679

Query: 435 -VQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
            + +S I MYS+  F NL Y   LF  + +++ ++WN+++    Q   +  A + F Q+ 
Sbjct: 680 SLFTSAICMYSR--FNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQ 737

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              ++ D VT L  I ACS +G+ +  + V    +  G    I +  AL DM+++CG + 
Sbjct: 738 FLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGSIS 797

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+++FD   E++ VSWS MI+ Y MHG    A  LF  M+ SGIKP+++TF+++L ACS
Sbjct: 798 FARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACS 857

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
            SG +E+G+  F +M    G+ P ++HYACMVDLL R+G ++ A+ ++ +MPF  + S+ 
Sbjct: 858 RSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLL 917

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
            +LL  CR H    + +++ K L+ +   +   Y +LSNIYA  G W ++ ++RS ME  
Sbjct: 918 ESLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDMEAK 977

Query: 731 GLKKVPGYSTI 741
           GL K  G S I
Sbjct: 978 GLIKDVGVSLI 988



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 192/680 (28%), Positives = 348/680 (51%), Gaps = 13/680 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KEPD 59
           L R+  + + L++LHA L VTG L  D       +E Y   G   S+  VF  F     +
Sbjct: 49  LLRATRSAKCLSKLHARLAVTGALREDASVVAGAVERYLFFGKPASAAAVFAGFYRGRAE 108

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            +   + ++C+  + F  E + LY ++    +   NF +P V+RAC+++  L  G++VH 
Sbjct: 109 VYDLNIAVRCFSDHGFHRELLGLYREVCAFGS--DNFTFPPVIRACAAVSCLRLGKEVHC 166

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+++ G   +  +QT++L  Y + G +D +R+VFD M SRD++SW+++I+ Y  N  + E
Sbjct: 167 RVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLE 226

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             +    M ++G  P+  +++ +      L        +H   L+  +  D  L  +FI 
Sbjct: 227 AAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFIS 286

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+  G L S+   F +       S  +MIS   + G ++KA   F  M      PNL+T
Sbjct: 287 MYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVT 346

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++++L  C+    +  G+SVH  +I+ G+  +   +  AL+  Y++ G +     +  ++
Sbjct: 347 VVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVV-SALVSMYSKLGDLDSAVFLFSSV 405

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E++ L WN LIS Y         +  + +MQ  G+ PD+ +V S +S C +   L +G 
Sbjct: 406 TEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGK 465

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH + ++   + +E V ++L+ MY+ CG  ++   LF  ++ ++++ WN++I GF +NG
Sbjct: 466 SIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENG 525

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +S+  +  F QM L  ++ D VT +  I + S I  +  G+ VH   I  G   D+ +  
Sbjct: 526 DSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVAN 585

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL  MY  CG +Q  +++FDS+S  N +S++A++  Y  +    +   LF  M+ +  KP
Sbjct: 586 ALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKP 645

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFG-VEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N +T +N+L  C HS  ++    +  A+R F  +E  L  +   + + SR  ++E    +
Sbjct: 646 NIITLLNLLPIC-HS-QLQGKTVHSYAIRNFSKLETSL--FTSAICMYSRFNNLEYCHNL 701

Query: 658 IHSMPFPANGSIWGALLNGC 677
              +    N  +W A+L+ C
Sbjct: 702 F-CLVGERNNIVWNAILSAC 720


>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Brachypodium distachyon]
          Length = 809

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 222/721 (30%), Positives = 376/721 (52%), Gaps = 13/721 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           GL  D    + +I+  A+ G    +   F+      +  W  +I   + N+    +I ++
Sbjct: 99  GLTGDAYVCSGMIDLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMF 158

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M+R     ++F Y  VL AC+   +L  G  VHG +++   + D  + TSI+  Y + 
Sbjct: 159 SDMVRGSCEPNSFTYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKS 218

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G +  A + F +M  R+VVSW++ IA +    +    +++   MVR GV  +  T  S+ 
Sbjct: 219 GDMIAAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSIL 278

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC ++  +R    +HG ++++++ +D  +  + I  Y+  G +  +E  F ++    +T
Sbjct: 279 LACSQMYMIREVSQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSST 338

Query: 264 S-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
             W+  IS  + S    ++L+  ++M      PN     +V  S   + +   G+ +H  
Sbjct: 339 RIWSTFISGVS-SHSLPRSLQLLMRMFRQGLRPNDRCYASVFSSMDSIEF---GRQLHSL 394

Query: 323 IIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           +I+ G    +D L G AL   Y+    + +  +V   + ER+ +SW  +++ +A  G S 
Sbjct: 395 VIKDGF--VHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSV 452

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLID 441
           EA  L   M   G  PD  ++++ LSAC     L  G  IHGH++++  +   +   L+ 
Sbjct: 453 EAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITSISHCLVS 512

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MYSKC     A  +F+    K  VM++SMI G+  NG S EA++LF  M     ++D   
Sbjct: 513 MYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFI 572

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             + +  C++I +   GK +H   I  G+  D+ + ++L  +Y+K G+L  +++VFD ++
Sbjct: 573 CSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEIT 632

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
             ++V+W+A+ID Y  HG   DA  +F  M+  G+KP+ V  +++L ACS +G VEEG  
Sbjct: 633 SPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVEEGVN 692

Query: 622 YFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           YF +MR I+GVEP L HY CMVDLL RSG ++ A   I SMP  A+  +W  L   CR+H
Sbjct: 693 YFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWSTLFAACRVH 752

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
               +   +E ++   G  D+G +  LSNI A  G+W+E  +VR  M+V   KK PG+S 
Sbjct: 753 NDAVLGGFVENKIREDGY-DSGSFATLSNILANSGDWEEVARVRKSMDV---KKEPGWSM 808

Query: 741 I 741
           +
Sbjct: 809 V 809



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 173/592 (29%), Positives = 288/592 (48%), Gaps = 11/592 (1%)

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           T S+  +   L AC   G +   E+V+    K G   D  + + ++    + G  +DA K
Sbjct: 66  TPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDALK 125

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
            F+       V W+++I+    N      + MF  MVR   EP+  T   +  AC     
Sbjct: 126 AFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAMGAE 185

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   R++HG VLRR  + D  +G S + MY+K GD+++A R F ++  R   SWT  I+ 
Sbjct: 186 LCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAG 245

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           + +      A+    +M+      N  T  ++L +C+ +  +RE   +H  I++K +  +
Sbjct: 246 FVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLD 305

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQM 390
           +  +  ALI  YA  G +   E     +G   +   W+  IS  +   + + +L+LL++M
Sbjct: 306 H-AVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHSLPR-SLQLLMRM 363

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
              GL P+    AS  S   ++ S++ G Q+H  VIK     D  V S+L  MYS+    
Sbjct: 364 FRQGLRPNDRCYASVFS---SMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDL 420

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             +Y +F+ +Q++  V W +M+ GF  +G+S+EA  LF  M L+  + D VT    + AC
Sbjct: 421 EDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSAC 480

Query: 510 SNIGQLEKGKWVH-HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
                L KGK +H H L  +G  +   I   L  MY+KC + QTA+R+FD+   ++ V +
Sbjct: 481 DKPECLLKGKTIHGHILRVHG--EITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMF 538

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           S+MI  Y  +G   +A SLF+ ML +G + +     +IL  C+       GK        
Sbjct: 539 SSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIK 598

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            G+  DL   + +V L S+SG++  + K+   +  P +   W A+++G   H
Sbjct: 599 AGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSP-DLVTWTAIIDGYAQH 649



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 277/573 (48%), Gaps = 13/573 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L     YD    T ++  YA+ G + ++   F      +   W   I  ++    
Sbjct: 192 VHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFVQEEE 251

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++ L  +M+R   +++ +   S+L ACS +  +    ++HG I+K     D  ++ +
Sbjct: 252 PVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDHAVKEA 311

Query: 136 ILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++CTY   G ++ +   F+++ T      WS+ I+    ++ +   L++   M R+G+ P
Sbjct: 312 LICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHS-LPRSLQLLMRMFRQGLRP 370

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +     S+  +   + S+   R +H  V++     D  +G++   MYS+  DL  + R F
Sbjct: 371 NDRCYASVFSS---MDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVF 427

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++++R   SWTAM++ +   G   +A   F  M+    +P+ +TL  +L +C     L 
Sbjct: 428 KEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLL 487

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +GK++H  I+R  +  E   +   L+  Y++C +     ++  A   ++ + ++ +IS Y
Sbjct: 488 KGKTIHGHILR--VHGEITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGY 545

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
           +  G S EA+ L   M + G   D F  +S LS C ++     G  +HGH IK     D 
Sbjct: 546 STNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDL 605

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V SSL+ +YSK G  N +  +F+ I    +V W ++I G+ Q+G+  +A+ +F  M   
Sbjct: 606 SVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITL 665

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            ++ D V  ++ + ACS  G +E+G  +       YGV   ++    + D+  + G LQ 
Sbjct: 666 GVKPDTVVLVSVLSACSRNGLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQD 725

Query: 553 AQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDA 584
           A+   +SM  + +++ WS +     +H   NDA
Sbjct: 726 AKSFIESMPMKADLMVWSTLFAACRVH---NDA 755



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 235/465 (50%), Gaps = 10/465 (2%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF-MWAVLIK 68
           +R+++++H  ++   L+ D      LI +YA +G++  S   F+      S  +W+  I 
Sbjct: 287 IREVSQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFIS 346

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             + ++    S+ L  +M R+    ++  Y SV    SS+  +  G ++H  +IK GF  
Sbjct: 347 G-VSSHSLPRSLQLLMRMFRQGLRPNDRCYASVF---SSMDSIEFGRQLHSLVIKDGFVH 402

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D ++ +++   Y     L+D+ +VF +M  RD VSW++++A +  +    E  ++F  M+
Sbjct: 403 DVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMI 462

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            +G +PD+VT+ ++  AC +   L   ++IHGH+LR   +I   + +  + MYSKC +  
Sbjct: 463 LDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITS-ISHCLVSMYSKCQEAQ 521

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A R F     +    +++MIS Y+ +G   +A+  F  ML    + +     ++L  CA
Sbjct: 522 TARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCA 581

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +     GK +H   I+ G+      +  +L++ Y++ G +++  KV   I   ++++W 
Sbjct: 582 DIARPLYGKLLHGHAIKAGIL-SDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWT 640

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I  YA+ G  ++ALE+   M T G+ PD+  + S LSAC   G ++ G+     +  I
Sbjct: 641 AIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVEEGVNYFESMRTI 700

Query: 429 DCKDEFVQS--SLIDMYSKCGFKNLAYLLFERIQQKSVVM-WNSM 470
              +  +     ++D+  + G    A    E +  K+ +M W+++
Sbjct: 701 YGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWSTL 745



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
              AL SFV    V   P+ +     L +C G G +   + V+C   + G+  +  Y+  
Sbjct: 50  LPSALASFVLSRAVGNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDA-YVCS 108

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            +I+  A+ G+  +  K        + + WN +IS   R    + A+++   M      P
Sbjct: 109 GMIDLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEP 168

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           +SF+ +  LSAC     L +G  +HG V++ D + D FV +S+++MY+K G    A   F
Sbjct: 169 NSFTYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREF 228

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
            R+  ++VV W + I GF Q    + A+ L  +M  + + M++ T  + + ACS +  + 
Sbjct: 229 WRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIR 288

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTD----MYAKCGDLQTAQRVFDSMSERNVVS-WSAM 571
           +   +H  ++    +K++Y+D A+ +     YA  G ++ ++  F+ +   +    WS  
Sbjct: 289 EVSQMHGMIM----KKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTF 344

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I     H  L  +  L  +M   G++PN+  + ++    S   S+E G+   + +   G 
Sbjct: 345 ISGVSSH-SLPRSLQLLMRMFRQGLRPNDRCYASVF---SSMDSIEFGRQLHSLVIKDGF 400

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
             D+   + +  + SR  D+E ++++   M      S W A++ G   H
Sbjct: 401 VHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVS-WTAMVAGFASH 448



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 175/374 (46%), Gaps = 8/374 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +F S  ++    +LH+ ++  G  +D    + L   Y+    L  S  VF   +E D   
Sbjct: 378 VFSSMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVS 437

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  +  +    E+  L+  MI +          ++L AC     L  G+ +HG I+
Sbjct: 438 WTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHIL 497

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           +   +    I   ++  Y +      AR++FD    +D V +SS+I+ Y  N   +E + 
Sbjct: 498 RVHGEITS-ISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMS 556

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M+  G + D     S+   C ++      + +HGH ++  I  D  + +S + +YS
Sbjct: 557 LFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYS 616

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           K G+L  + + F +I      +WTA+I  Y + G  + ALE F  M+ +  +P+ + L++
Sbjct: 617 KSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVS 676

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPE---YDYLGPALIEFYAECGKMSECEKVIHAI 359
           VL +C+  G + EG + + + +R   G E   + Y    +++     G++ + +  I ++
Sbjct: 677 VLSACSRNGLVEEGVN-YFESMRTIYGVEPMLHHYC--CMVDLLGRSGRLQDAKSFIESM 733

Query: 360 GER-NILSWNMLIS 372
             + +++ W+ L +
Sbjct: 734 PMKADLMVWSTLFA 747


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 222/730 (30%), Positives = 387/730 (53%), Gaps = 16/730 (2%)

Query: 19  HLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEE 78
           H +  G  +     + LI+ +++      +  VF      + + W  +I   + N  +  
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA 234

Query: 79  SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILC 138
              L+H+M        ++ Y SVL AC+SL  L  G+ V  R+IKCG + D  + T+I+ 
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVD 293

Query: 139 TYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVT 198
            Y + G + +A +VF ++ +  VVSW+ +++ Y  + D    L++F  M   GVE +  T
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           + S+  ACG    +  A  +H  V +    +D  +  + I MYSK GD+  +E+ F  ++
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413

Query: 259 K-RCTTSWTAMISCYNRSGWFQKALESFVKMLE---VKEEPNLITLITVLGSCAGLGWLR 314
             +       MI+ +++S    KA+  F +ML+     +E ++ +L++VL  C  LG   
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-DCLNLG--- 469

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
             K VH   ++ G+  +   +G +L   Y++CG + E  K+   I  ++   W  +IS +
Sbjct: 470 --KQVHGYTLKSGLVLDLT-VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKD 432
              G  +EA+ L  +M   G  PD  ++A+ L+ C +  SL  G +IHG+ ++  ID K 
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID-KG 585

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             + S+L++MYSKCG   LA  +++R+ +   V  +S+I G+ Q+G   +   LF  M +
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           +   MD     + ++A +   +   G  VH  +   G+  +  + ++L  MY+K G +  
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
             + F  ++  ++++W+A+I  Y  HG+ N+A  ++  M + G KP++VTF+ +L ACSH
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            G VEE  F+ N+M + +G+EP+ +HY CMVD L RSG +  A   I++M    +  +WG
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
            LL  C+IH  +++ K   K+      +D G Y  LSNI AE G WDE  + R +M+ TG
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTG 885

Query: 732 LKKVPGYSTI 741
           ++K PG+S++
Sbjct: 886 VQKEPGWSSV 895



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 204/681 (29%), Positives = 327/681 (48%), Gaps = 13/681 (1%)

Query: 9   NLRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           NLR    L AHLL   L  +D   +  L+  Y+  GS+  +  +FDT  +PD     ++I
Sbjct: 63  NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y  +  FEES+  + KM       +   Y SV+ ACS+L      E V    IK G+ 
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
             +V++++++  + +    +DA KVF    S +V  W++IIA    N +      +FH M
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
                +PD  T  S+  AC  L  LR  + +   V++   + D  +  + + +Y+KCG +
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHM 301

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A   F +I      SWT M+S Y +S     ALE F +M     E N  T+ +V+ +C
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV---IHAIGERNI 364
                + E   VH  + + G   +   +  ALI  Y++ G +   E+V   +  I  +NI
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLD-SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +  N++I+ +++     +A+ L  +M   GL  D FSV S LS    +  L LG Q+HG+
Sbjct: 421 V--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGY 475

Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
            +K     D  V SSL  +YSKCG    +Y LF+ I  K    W SMI GF + G   EA
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           I LF +M  +    DE T    +  CS+   L +GK +H   +  G+ K + + +AL +M
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCG L+ A++V+D + E + VS S++I  Y  HG + D   LF+ M+ SG   +    
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +IL A + S     G      +   G+  +    + ++ + S+ G I+   K    +  
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING 715

Query: 664 PANGSIWGALLNGCRIHKRID 684
           P +   W AL+     H + +
Sbjct: 716 P-DLIAWTALIASYAQHGKAN 735



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 231/472 (48%), Gaps = 11/472 (2%)

Query: 209 LCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           LC+LR  + +  H+LRR  +  D  L  S +  YS  G +  A + F  I +    S   
Sbjct: 61  LCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNI 120

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MIS Y +   F+++L  F KM  +  E N I+  +V+ +C+ L      + V C  I+ G
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
               Y+ +  ALI+ +++  +  +  KV       N+  WN +I+   R        +L 
Sbjct: 181 YF-FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            +M      PDS++ +S L+AC ++  L+ G  +   VIK   +D FV ++++D+Y+KCG
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCG 299

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  +F RI   SVV W  M+ G+ ++ ++  A+ +F +M  + +E++  T  + I 
Sbjct: 300 HMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF---DSMSERN 564
           AC     + +   VH  +   G   D  +  AL  MY+K GD+  +++VF   D +  +N
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +V  + MI  +    +   A  LF +ML  G++ +E +  ++L   S    +  GK    
Sbjct: 420 IV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHG 474

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                G+  DL   + +  L S+ G +E ++K+   +PF  N + W ++++G
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISG 525



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 188/389 (48%), Gaps = 12/389 (3%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           C NL K  ++H + L +GL  D    + L   Y++ GSL  S  +F      D+  WA +
Sbjct: 465 CLNLGK--QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASM 522

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I  +    +  E+I L+ +M+ +  +       +VL  CSS   L  G+++HG  ++ G 
Sbjct: 523 ISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGI 582

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           DK   + ++++  Y + G L  AR+V+D++   D VS SS+I+ Y  +  + +G  +F  
Sbjct: 583 DKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRD 642

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           MV  G   D   + S+ +A            +H ++ +  +  +  +G+S + MYSK G 
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +    + F +I      +WTA+I+ Y + G   +AL+ +  M E   +P+ +T + VL +
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762

Query: 307 CAGLGWLREGK-SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNI 364
           C+  G + E    ++  +   G+ PE  +    +++     G++ E E  I+ +  + + 
Sbjct: 763 CSHGGLVEESYFHLNSMVKDYGIEPENRHY-VCMVDALGRSGRLREAESFINNMHIKPDA 821

Query: 365 LSWNMLISEYARKG-------MSKEALEL 386
           L W  L++     G        +K+A+EL
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIEL 850


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 208/612 (33%), Positives = 342/612 (55%), Gaps = 4/612 (0%)

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  ++L     FG +  A +VF KM  RDV SW+ ++  Y     + E L +++ M+  G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           + PD  T   +   CG +   R  R +H HVLR     +  + N+ + MY+KCGD+++A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F  +      SW AMI+ +  +   +  LE F+ MLE + +PNL+T+ +V  +   L 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +   K +H   +++G   +  +   +LI+ Y   G+M +  K+   +  ++ +SW  +I
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCN-SLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI-KIDC 430
           S Y + G   +ALE+   M+   + PD  ++AS+L+AC  +G L +G+++H     K   
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           +   V ++L++MY+K    + A  +F+ + +K VV W+SMI GF  N  S EA+  F  M
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM 491

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            L  ++ + VTF+ A+ AC+  G L  GK +H  ++  G+  + Y+  AL D+Y KCG  
Sbjct: 492 -LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 550

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A   F   SE++VVSW+ M+  +  HG  + A SLF QM++ G  P+EVTF+ +L AC
Sbjct: 551 SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610

Query: 611 SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           S +G V +G   F+ M   F + P+L+HYACMVDLLSR G +  A+ +I+ MP   + ++
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           WGALLNGCRIH+ +++ +   K +     ND  Y+ LL ++Y + G W +  +VR  M  
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730

Query: 730 TGLKKVPGYSTI 741
            GL++  G S +
Sbjct: 731 KGLEQDNGCSWV 742



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 180/615 (29%), Positives = 312/615 (50%), Gaps = 18/615 (2%)

Query: 3   LFRSC-------TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF 55
           LFR C         +R   R  A     GL         ++      G +  +  VF   
Sbjct: 102 LFRLCEWRRAVDAGMRACARADAEHPSFGLRL----GNAMLSMLVRFGEIWHAWRVFAKM 157

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            E D F W V++  Y    F EE++ LY++M+        + +P VLR C  + D   G 
Sbjct: 158 PERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGR 217

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH  +++ GF  +  +  +++  Y + G +  ARKVFD M   D +SW+++IA +F+N 
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENH 277

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           +   GL++F +M+   V+P+ +T+ S+  A G L  +  A+ +HG  ++R   ID    N
Sbjct: 278 ECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCN 337

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S I MY+  G +  A + F ++E +   SWTAMIS Y ++G+  KALE +  M      P
Sbjct: 338 SLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSP 397

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +T+ + L +CA LG L  G  +H     KG    Y  +  AL+E YA+   + +  +V
Sbjct: 398 DDVTIASALAACACLGRLDVGIKLHELAQNKGF-IRYVVVANALLEMYAKSKHIDKAIEV 456

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              + E++++SW+ +I+ +     S EAL     M    + P+S +  ++LSAC   G+L
Sbjct: 457 FKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGAL 515

Query: 416 QLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G +IH +V++     E +V ++L+D+Y KCG  + A+  F    +K VV WN M+ GF
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 575

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKD 533
             +G    A++LF+QM       DEVTF+  + ACS  G + +G  + H +   + +  +
Sbjct: 576 VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPN 635

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +     + D+ ++ G L  A  + + M  + +   W A+++   +H  +       K +L
Sbjct: 636 LKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVIL 695

Query: 593 DSGIKPNEVTFMNIL 607
           +  ++PN+V +  +L
Sbjct: 696 E--LEPNDVAYHVLL 708


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 199/590 (33%), Positives = 325/590 (55%), Gaps = 12/590 (2%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRP 214
           M  ++VV+W+S+++ Y  N      L MF  MV  GV P DF    +L  AC +L +LR 
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALV-ACADLGALRA 59

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              +H   +R     D  +G+  I MYS+CG L +A+  F +++      +T++IS + R
Sbjct: 60  GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 119

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYD 333
           +G F+ A E+ ++ML+   +PN  T+ T+L +C  +     G+ +H  +I+K G+  +  
Sbjct: 120 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSV 175

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           Y   ALI+FY+  G+    + V  ++  +N++SW  ++  Y R G  +EAL++   M + 
Sbjct: 176 YSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE 235

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLA 452
           G+ P+ F+++  L ACG++G   LG Q+H   IK D   D  V ++L+ MY + G     
Sbjct: 236 GVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 292

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +  +I+   +V W + I   +QNG   +AI L  QM+      +   F + + +C+++
Sbjct: 293 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 352

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L++G   H   +  G   +I    AL +MY+KCG + +A+  FD M   +V SW+++I
Sbjct: 353 ASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLI 412

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             +  HG  N A  +F +M  +GIKP++ TF+ +L  C+HSG VEEG+ +F  M   +  
Sbjct: 413 HGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSF 472

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            P   HYACM+D+L R+G  + A +MI+ MPF  +  IW  LL  C++H+ +D+ K    
Sbjct: 473 TPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAAD 532

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            L      D+  Y L+SNIYA  G W++  KVR  M+ TG+KK  G S I
Sbjct: 533 RLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWI 582



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 285/577 (49%), Gaps = 49/577 (8%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  Y  N   E ++ ++  M+      ++F   + L AC+ LG L +GE+VH   +
Sbjct: 9   WTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAV 68

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + GF  D  I + ++  Y   G L  A++VFD+M S DVV ++S+I+++  N +     +
Sbjct: 69  RAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE 128

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNSFIV 239
               M+++G++P+  TM ++  AC  +      + IHG+++ +KI +         + I 
Sbjct: 129 ALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLI-KKIGLRSQSVYSSTALID 183

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            YS+ G+   A+  F  +  +   SW +M+  Y R G  ++AL+ F  M+    +PN   
Sbjct: 184 FYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA 243

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L  VLG+C  +G    G+ +HC  I+  +  +   +  AL+  Y   G + E E +++ I
Sbjct: 244 LSIVLGACGSIGL---GRQLHCSAIKHDLITDI-RVSNALLSMYGRTGLVEELEAMLNKI 299

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              +++SW   IS   + G  ++A+ LL QM + G  P+ ++ +S LS+C +V SL  G+
Sbjct: 300 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 359

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H   +K+ C  E    ++LI+MYSKCG    A L F+ +    V  WNS+I G  Q+G
Sbjct: 360 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 419

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYID 537
           ++ +A+ +F +M  N ++ D+ TFL  +  C++ G +E+G+     +I  Y         
Sbjct: 420 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 479

Query: 538 TALTDMYAKCGDLQTAQRVFDSM-----------------------------------SE 562
             + DM  + G    A R+ + M                                   S+
Sbjct: 480 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 539

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           R+  S+  M + Y MHG+  DA  + ++M ++G+K +
Sbjct: 540 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKD 576



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 166/349 (47%), Gaps = 16/349 (4%)

Query: 31  ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           +ST LI+ Y+  G  + ++ VFD+    +   W  +++ Y+ +   EE++ ++  MI E 
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
              + F    VL AC   G +G G ++H   IK     D  +  ++L  YG  G +++  
Sbjct: 237 VDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 293

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            + +K+ + D+VSW++ I++ F N    + + +   M  EG  P+     S+  +C ++ 
Sbjct: 294 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 353

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           SL      H   L+     +   GN+ I MYSKCG + SA   F  +     TSW ++I 
Sbjct: 354 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 413

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            + + G   KALE F KM     +P+  T + VL  C   G + EG     ++  + M  
Sbjct: 414 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG-----ELFFRLMID 468

Query: 331 EYDYLGPA------LIEFYAECGKMSECEKVIHAIG-ERNILSWNMLIS 372
           +Y +  PA      +I+     G+  E  ++I+ +  E + L W  L++
Sbjct: 469 QYSFT-PAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 516



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 155/393 (39%), Gaps = 43/393 (10%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           +C ++    +LH   +   L  D   S  L+  Y   G +     + +  + PD   W  
Sbjct: 250 ACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTT 309

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
            I     N F E++I L  +M  E  T + + + SVL +C+ +  L  G + H   +K G
Sbjct: 310 AISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG 369

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D +     +++  Y + G +  AR  FD M + DV SW+S+I  +  + D ++ L++F 
Sbjct: 370 CDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFS 429

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G++PD  T L +   C     +       G +  R                    
Sbjct: 430 KMRSNGIKPDDSTFLGVLMGCNHSGMVE-----EGELFFR-------------------- 464

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L+  + +F        + +  MI    R+G F +AL     M     EP+ +   T+L 
Sbjct: 465 -LMIDQYSFTP----APSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLA 516

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI- 364
           SC     L  GK    +++         Y+   +   YA  G+  +  KV   + E  + 
Sbjct: 517 SCKLHRNLDIGKLAADRLMELSDRDSASYV--LMSNIYAMHGEWEDARKVRRRMDETGVK 574

Query: 365 ----LSW---NMLISEYARKGMSKEALELLVQM 390
                SW   N  +  +A + MS    + + QM
Sbjct: 575 KDAGCSWIEINNEVHTFASRDMSHPNSDSIYQM 607


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 214/707 (30%), Positives = 357/707 (50%), Gaps = 70/707 (9%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L++CS++ +      +H  +I      D  I + +L        LD A ++       +
Sbjct: 41  LLKSCSNIREFSP---IHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            + W++++ +        E L+ ++ MV +GV  D  T   L  AC +   ++    +HG
Sbjct: 98  SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            +L+     +  L N+ + +YSKCG L    + F K+  R   SW  MISCY   G +++
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           AL+ F +ML     P+ IT+++++ +CA L  L  GK +H  I+   +      L   L+
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLN-CLV 276

Query: 341 EFYAECGKMSECE---------------------------------KVIHAIGERNILSW 367
           + Y++CGKM E                                   ++   + ER+++SW
Sbjct: 277 DMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSW 336

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
             ++S Y + G   E+LEL  QM+   ++PD  ++ + LSAC ++    LG  +H  ++ 
Sbjct: 337 TTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVT 396

Query: 428 ID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG-------- 478
                D F+ ++L+D+Y+KCG  + A   FE++  KS   WNSM+ GF ++G        
Sbjct: 397 YGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDF 456

Query: 479 ------------NSL-----------EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
                       N++           E+  +F +M  + ++ D+ T ++ + +C+ +G L
Sbjct: 457 FNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGAL 516

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             G WV+  +    +  D  + TAL DMY KCG ++ A  +F  + E+NV  W+AM+  Y
Sbjct: 517 NHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAY 576

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF-GVEPD 634
            M GQ  +A  L+ +M + G+KP+ VTF+ +L ACSH G V+EG  YFN +R F  + P 
Sbjct: 577 AMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPT 636

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           + HY CMVDLL R G +E   K I  MP   + SIW +L+  CR H  +++ +   K+L 
Sbjct: 637 IHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLI 696

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                +NG + LLSNIYA+ G WD+  KVR+ +  TG+ K PG++ I
Sbjct: 697 EIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMI 743



 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 190/658 (28%), Positives = 340/658 (51%), Gaps = 68/658 (10%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L +SC+N+R+ + +HAHL+   L +DP  +++++     + +L  +  +     EP+S +
Sbjct: 41  LLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESII 100

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L++  +     +E +  Y+ M+ +   +    +  ++ AC    D+  G +VHGRI+
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           KCGF ++  +  +++  Y + G L +  ++F+KMT RDV+SW+++I+ Y       E L 
Sbjct: 161 KCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALD 220

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M+  GV PD +TM+SL   C +L  L   + +H +++  K+ I G L N  + MYS
Sbjct: 221 LFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYS 280

Query: 243 KCGD------LLS---------------------------AERTFVKIEKRCTTSWTAMI 269
           KCG       LLS                           A + F K+ +R   SWT M+
Sbjct: 281 KCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMM 340

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           S Y + G++ ++LE F +M      P+ + L+TVL +C  L     G+SVH  I+  GM 
Sbjct: 341 SGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGML 400

Query: 330 PEYDYLGPALIEFYAECGKMSECEKV-------------------------------IHA 358
            +  +LG AL++ YA+CGK+ E  +                                 + 
Sbjct: 401 VD-GFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNK 459

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I E++I+SWN +++ Y +  +  E+ E+  +MQ+  + PD  ++ S LS+C  VG+L  G
Sbjct: 460 IPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHG 519

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           + ++ ++ K +   D  + ++LIDMY KCG   +AY +F +I +K+V +W +M+  +   
Sbjct: 520 IWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAME 579

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYI 536
           G +LEAI+L+ +M    ++ D VTF+  + ACS+ G +++G    +KL S Y +   I+ 
Sbjct: 580 GQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHH 639

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
              + D+  + G L+   +  + M  E +V  WS+++     H  +  A   FKQ+++
Sbjct: 640 YGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE 697


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 219/733 (29%), Positives = 384/733 (52%), Gaps = 9/733 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA +  + +   P     L+  Y + GSL  ++  FD     D+  WA LI+ +     
Sbjct: 20  VHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGD 79

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDL-GSGEKVHGRIIKCGFDKDDVIQT 134
            E+++ L+  M  E     N  + +VL ACS+  +L   G ++HG +     + D  + T
Sbjct: 80  SEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVST 139

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++L  YG+   ++DARKVFD +  + VV W+++I +Y       + +++F++M+ EGV+ 
Sbjct: 140 TLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKA 199

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAER 252
           + +T + + +AC +L  L  A+ +   V  R+     D     + +  Y  CGDL  A R
Sbjct: 200 ERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFR 259

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F +       + TAMI+ Y +   + +ALE F  ML    + + I  + VL +C+G   
Sbjct: 260 AFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRG 318

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L EG+ +H   +R+     +   G ALI  Y +CG + E  +V  ++  R+++SWN +I+
Sbjct: 319 LEEGRMIH-GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIA 377

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            + +     EAL LL  MQ  G+  D  S  ++L  C    +L  G  IH  +++   K 
Sbjct: 378 AHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKA 437

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY-QNGNSLEAINLFHQM 490
           D  + ++++DMY  C   + A  +F  ++ +  V WN+MI  +  Q   S EA+ LF QM
Sbjct: 438 DVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQM 497

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            L+    D ++F+ A+ AC+    L +GK +H ++   G+  ++ +  A+ +MYAK G L
Sbjct: 498 QLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSL 557

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+++F  M   +V+SW+ MI  +  HG  +     F++M   G  PN+VTF++++ AC
Sbjct: 558 VLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSAC 617

Query: 611 SHSGSVEEG-KFYFNAMRIF-GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           SH G V++G + + + +  F  + P  +HY CMVDL++R+G ++ A K I + P   +  
Sbjct: 618 SHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRV 677

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           I   +L   ++HK ++  +   + L     + +  Y +LSN+Y E G  DE  K+R +M 
Sbjct: 678 IHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMY 737

Query: 729 VTGLKKVPGYSTI 741
              ++K P +S+I
Sbjct: 738 EKNIRKEPAFSSI 750



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 186/624 (29%), Positives = 312/624 (50%), Gaps = 22/624 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L   +    L  G++VH RI K   D+   +   ++  Y + G L DA+  FD+M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP---DFVTMLSLAEACGELCSLRP 214
            +D ++W+ +I ++    D  + L +F SM  EGV P   +FV +L    A  EL  L  
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPEL--LEE 118

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R IHG +    ++ D  +  + + MY KC  +  A + F  I  +    W AMI+ Y +
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
               ++A++ F  ML    +   IT I VL +C+ L  L   K V   +  +    E+D+
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER----EHDH 234

Query: 335 L-----GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           L       AL+ FY  CG + +  +         IL+  M I++Y ++    EALEL   
Sbjct: 235 LHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAM-ITQYTQRERWDEALELFKV 293

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS--SLIDMYSKCG 447
           M   G+  D  +  + L+AC     L+ G  IHG + +I   D  V +  +LI+MY KCG
Sbjct: 294 MLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRF-DRHVNAGNALINMYGKCG 352

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  +F  +Q + V+ WN++I    Q+    EA++L H M L+ ++ D+++F+ A+ 
Sbjct: 353 SLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALP 412

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            C+    L KG+ +H  ++  G++ D+ +D A+ DMY  C     A RVF +M  R+ VS
Sbjct: 413 LCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVS 472

Query: 568 WSAMIDCYGMHGQL-NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           W+AMI  Y    +L ++A  LF+QM   G  P+ ++F+  L AC+   S+ EGK   + +
Sbjct: 473 WNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRI 532

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           R  G+E ++     ++++ ++SG +  A KM   MP P   S W  +++    H   D +
Sbjct: 533 RETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVIS-WNGMISAFAQHGHADQV 591

Query: 687 KTIEKELSVTG--TNDNGYYTLLS 708
               + ++  G   ND  + +++S
Sbjct: 592 LRFFRRMNHEGKLPNDVTFVSVVS 615



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 265/551 (48%), Gaps = 16/551 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H  L  T +  D   ST L+  Y +  S+  +R VFD  +      W  +I  Y   +
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD--KDDVI 132
             E++I +++ M+ E        +  VL ACS L DL   + V   + +   D   D   
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            T+++  YG  G L+ A + F +    +++  +++I  Y       E L++F  M+ EGV
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSA 250
           + D +  +++  AC     L   R IHG +  R+I+ D  +  GN+ I MY KCG L  A
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFM--REIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              F  ++ R   SW  +I+ + +     +AL     M     + + I+ +  L  CA  
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAAS 417

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L +G+ +H  I+  G+  +   L  A+++ Y  C    +  +V  A+  R+ +SWN +
Sbjct: 418 EALAKGRMIHSWIVESGIKADV-MLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAM 476

Query: 371 ISEY-ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           I+ Y A+  +S EAL L  QMQ  G MPD  S  ++LSAC    SL  G  +H  + +  
Sbjct: 477 ITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETG 536

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            +    V +++++MY+K G   LA  +F ++    V+ WN MI  F Q+G++ + +  F 
Sbjct: 537 LESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFR 596

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH----HKLISYGVRKDIYIDTALTDMY 544
           +M       ++VTF++ + ACS+ G ++ G  +     H   +   R + Y    + D+ 
Sbjct: 597 RMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYY--CMVDLI 654

Query: 545 AKCGDLQTAQR 555
           A+ G L  A++
Sbjct: 655 ARAGKLDAAEK 665



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 151/365 (41%), Gaps = 35/365 (9%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL  +   L K   +H+ ++ +G+  D      +++ Y    S   +  VF   K  D 
Sbjct: 411 LPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQ 470

Query: 61  FMWAVLIKCYMWN-NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             W  +I  Y        E++LL+ +M           + + L AC++   L  G+ +H 
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHD 530

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI + G + +  +  ++L  Y + G L  ARK+F KM   DV+SW+ +I+++  +    +
Sbjct: 531 RIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQ 590

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+ F  M  EG  P+ VT +S+  AC            HG +++  +++          
Sbjct: 591 VLRFFRRMNHEGKLPNDVTFVSVVSACS-----------HGGLVKDGVQL---------- 629

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                   +S    F  I  R    +  M+    R+G    A E F+    +K  P+ + 
Sbjct: 630 -------FVSLLHDFPTISPR-AEHYYCMVDLIARAGKLDAA-EKFIAAAPLK--PDRVI 678

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             T+LG+      +   +     ++   + P+       L   Y E GK  E  K+   +
Sbjct: 679 HSTMLGASKVHKDVERARKSAEHLME--LTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLM 736

Query: 360 GERNI 364
            E+NI
Sbjct: 737 YEKNI 741


>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 221/715 (30%), Positives = 386/715 (53%), Gaps = 22/715 (3%)

Query: 47  SSRLVFDTF-KEPDSFMWAVLIKCYMWNNFFEESILLY---HKMIREQATISNFIYPSVL 102
           + RL+ D   + P + +  VL+  Y+     + ++ LY   +   R      ++ Y   L
Sbjct: 48  ARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALRLYALLNHAARPAPRSDHYTYSCAL 107

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSIL-----CTYGEFGCLDDARKVFDK 155
            AC+    L  G  VH  +++      D  V++ S+L     C     G +D  R++FD 
Sbjct: 108 TACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDA 167

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  ++VVSW+++   Y       E L+MF  M+ +GV P  V+ +++  A G      P 
Sbjct: 168 MPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAGSGDPSWPF 227

Query: 216 RSIHGHVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             ++G +++  ++   D  + +S I M+S+  D+ SA   F +  K+    W  MI+ Y 
Sbjct: 228 L-LYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYV 286

Query: 274 RSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           ++G F +A++ F+++L  KE P +++T ++ + + +    +R G+ +H  ++ KGM    
Sbjct: 287 QNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLM-KGMHSTL 345

Query: 333 DY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              LG AL+  Y+ CG +    ++   + E++I+SWN +I+ + +     E L L+ QMQ
Sbjct: 346 PVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQ 405

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
             G +PD+ ++ + LSA  N G LQ+G Q HG++I+   + E ++S LIDMYSK G  ++
Sbjct: 406 KSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEGLESYLIDMYSKSGRIDM 465

Query: 452 AYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           A  +F+     +  V WN+MI G+ Q+G   +A+  F  M    +E   VT  + + AC 
Sbjct: 466 AQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACD 525

Query: 511 NIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            +G  +  GK +H   + + +  ++++ TAL DMY+KCG++  A+ VF  M+E++ V+++
Sbjct: 526 PVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYT 585

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
            MI   G HG    A SLF  M D G+KP+ VTF+  + AC++SG V+EG   + +M  F
Sbjct: 586 TMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETF 645

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRIDVMK- 687
           G+    QH+ C+VDLL+++G ++ A+  + S+    N  +IWG+LL  C+   ++++   
Sbjct: 646 GLAATPQHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLASCKAQGKMELAAW 705

Query: 688 TIEKELSVTGT-NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             EK L++       GY  LLS ++A EGNW     +R  M + GL+K  G + I
Sbjct: 706 ATEKVLNIEKQYGHAGYNVLLSQLFAAEGNWSSADSLRKEMRLRGLRKEAGSTWI 760



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 199/381 (52%), Gaps = 19/381 (4%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           ++R   +LH +L+  G+H   P      L+  Y+  G+++++  +FD   E D   W  +
Sbjct: 326 DVRLGQQLHGYLM-KGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTM 384

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I  ++ N+F  E +LL ++M +           +VL A S+ GDL  G++ HG +I+ G 
Sbjct: 385 ITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGI 444

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           + +  +++ ++  Y + G +D A++VFD     RD V+W+++IA Y  +    + +  F 
Sbjct: 445 EGEG-LESYLIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFR 503

Query: 186 SMVREGVEPDFVTMLSLAEAC----GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           +M+  GVEP  VT+ S+  AC    G +C+    + IH   LR  +  +  +G + + MY
Sbjct: 504 AMIEAGVEPTSVTLASVLPACDPVGGGVCA---GKQIHSFALRHSLDTNVFVGTALVDMY 560

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           SKCG++ +AE  F  + ++ T ++T MIS   + G+ ++AL  F  M +   +P+ +T +
Sbjct: 561 SKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFL 620

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMG--PEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + +C   G + EG S++  +   G+   P++      +++  A+ G++ E    + ++
Sbjct: 621 AAISACNYSGLVDEGLSLYRSMETFGLAATPQHHC---CIVDLLAKAGRVDEAYDFVESL 677

Query: 360 GERN--ILSWNMLISEYARKG 378
           GE    I  W  L++    +G
Sbjct: 678 GEDGNFIAIWGSLLASCKAQG 698


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 204/700 (29%), Positives = 367/700 (52%), Gaps = 13/700 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+ +L  G   D   S  ++  Y + GSL  +R VF+    P++  W  ++     +  
Sbjct: 226 IHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGC 285

Query: 76  FEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E++  + +M ++   T     + ++L ACSS   L  GE +H  I++CG+D   ++  
Sbjct: 286 CVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGN 345

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            I+  Y   G +D+A   F  M  RD +SW++II+ +       E + +F  M+ EG+ P
Sbjct: 346 CIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITP 405

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T +S+ +    +   + A+ +   ++   +++D  L ++ I M+S+ G++  A   F
Sbjct: 406 DKFTFISIIDGTARM---QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLF 462

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             ++ R    WT++IS Y + G    AL     M       N  TL+T L +CA L  L 
Sbjct: 463 DDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALS 522

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           EGK +H   I +G       +G ALI  YA+CG + E ++V H  G +N++SWN + + Y
Sbjct: 523 EGKLIHAHAIERGFAAS-PAVGNALINMYAKCGCLEEADRVFHQCG-KNLVSWNTIAAAY 580

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
            ++   +EAL+L  +MQ  GL  D  S  + L+ C +      G +IH  +++   + D 
Sbjct: 581 VQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GRKIHNILLETGMESDH 637

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++L++MY+     + A  +F R++ + +V WN+MI G  ++G S EAI +F +M L 
Sbjct: 638 IVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLE 697

Query: 494 CLEMDEVTFLTAIQA--CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            +  D+++F+T + A   S+   L++ + V   +   G   D  +  A+  M+ + G L 
Sbjct: 698 GVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLA 757

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+R F+ + ER+  SW+ ++  +  HG++  A  LF++M     +P+ +T +++L ACS
Sbjct: 758 EARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACS 817

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G +EEG  +F +M R FG+    +HY C+VDLL+R+G ++ A +++  MP PA+  +W
Sbjct: 818 HGGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLW 877

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
             LL+ C++       K + + +          Y +LS++
Sbjct: 878 MTLLSACKVQGDEKRAKRVGERVMELDPRRPAAYVVLSSV 917



 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 192/666 (28%), Positives = 348/666 (52%), Gaps = 17/666 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+ +  +    D       I  Y + G +  +  VF +   P    W  L+  +  +  
Sbjct: 24  VHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFARDGQ 83

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F+++  ++ +M  +        + +VL  CS++GDL  G+ +HG +++ G +++ ++ TS
Sbjct: 84  FQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTS 143

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  YG+ GC++DAR+VFDK+  +DVVSW+S+I +Y  +    E L++FH M   GV P+
Sbjct: 144 LIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPN 203

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T  +   AC  + S+   + IH  VL    + D  +  + + MY KCG L  A   F 
Sbjct: 204 RITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFE 263

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLR 314
           ++    T SW A+++   + G   +AL  F +M L+    P+ +T IT+L +C+    L 
Sbjct: 264 RMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLT 323

Query: 315 EGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            G+ +H  I++ G    YD    +G  ++  Y+ CG++         + ER+ +SWN +I
Sbjct: 324 FGELLHECILQCG----YDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTII 379

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S +A+ G   EA+ L  +M   G+ PD F+  S +     +   ++  ++   +++   +
Sbjct: 380 SGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSEL---MVESGVE 436

Query: 432 -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            D F+ S+LI+M+S+ G    A  LF+ ++ + +VMW S+I  + Q+G+S +A+     M
Sbjct: 437 LDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLM 496

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            L  L  ++ T +TA+ AC+++  L +GK +H   I  G      +  AL +MYAKCG L
Sbjct: 497 RLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCL 556

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           + A RVF     +N+VSW+ +   Y    +  +A  LF++M   G+K ++V+F+ +L  C
Sbjct: 557 EEADRVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGC 615

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           S   S  EG+   N +   G+E D      ++++ + S  ++ A ++   M F    S W
Sbjct: 616 S---SASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVS-W 671

Query: 671 GALLNG 676
            A++ G
Sbjct: 672 NAMIAG 677



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 300/566 (53%), Gaps = 10/566 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + ++L  C+    +  G  VH R+    F +DD++Q + +  YG+ GC++DA  VF  + 
Sbjct: 5   FLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLD 64

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
               VSW+S++A++  +    +  ++F  M  +G+ PD +T +++ + C  +  L   + 
Sbjct: 65  HPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKL 124

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HG VL   ++ +  +G S I MY KCG +  A R F K+  +   SWT+MI  Y +   
Sbjct: 125 LHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDR 184

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +ALE F +M      PN IT  T + +CA +  + +GK +H Q++  G   +   +  
Sbjct: 185 CVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDV-VVSC 243

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLM 396
           A++  Y +CG + +  +V   +   N +SWN +++   + G   EAL    +MQ   G+ 
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGIT 303

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
           PD  +  + L+AC +  +L  G  +H  +++        V + ++ MYS CG  + A   
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAF 363

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F  + ++  + WN++I G  Q G   EA++LF +M    +  D+ TF++ I   +   ++
Sbjct: 364 FSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA---RM 420

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           ++ K +   ++  GV  D+++ +AL +M+++ G+++ A+ +FD M +R++V W+++I  Y
Sbjct: 421 QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSY 480

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF-YFNAM-RIFGVEP 633
             HG  +DA    + M   G+  N+ T +  L AC+   ++ EGK  + +A+ R F   P
Sbjct: 481 VQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASP 540

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIH 659
            + +   ++++ ++ G +E A ++ H
Sbjct: 541 AVGN--ALINMYAKCGCLEEADRVFH 564



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 249/466 (53%), Gaps = 6/466 (1%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T L+L   C +  ++   R +H  V   + + D  + N+ I MY KCG +  A   F  +
Sbjct: 4   TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
           +     SW ++++ + R G FQ+A + F +M      P+ IT +TVL  C+ +G L  GK
Sbjct: 64  DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H  ++  G+      +G +LI+ Y +CG + +  +V   +  ++++SW  +I  Y + 
Sbjct: 124 LLHGFVLEAGLERNV-MVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQH 182

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS 437
               EALEL  +M+  G++P+  + A+++SAC +V S+  G  IH  V++   + + V S
Sbjct: 183 DRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVS 242

Query: 438 -SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN-CL 495
            ++++MY KCG    A  +FER+   + V WN+++    Q+G  +EA+  F +M L   +
Sbjct: 243 CAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGI 302

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D+VTF+T + ACS+   L  G+ +H  ++  G    + +   +  MY+ CG +  A  
Sbjct: 303 TPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
            F +M ER+ +SW+ +I  +   G  ++A  LF++ML  GI P++ TF++I+     +  
Sbjct: 363 FFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISII---DGTAR 419

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           ++E K     M   GVE D+   + ++++ SR G++  A  +   M
Sbjct: 420 MQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDM 465



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 153/276 (55%), Gaps = 2/276 (0%)

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           L  C    ++  G  +H  V   + + D+ VQ++ I MY KCG    A  +F+ +   S 
Sbjct: 9   LGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQ 68

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V WNS++  F ++G   +A  +F +M L  L  D +TF+T +  CS IG L +GK +H  
Sbjct: 69  VSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGF 128

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
           ++  G+ +++ + T+L  MY KCG ++ A+RVFD ++ ++VVSW++MI  Y  H +  +A
Sbjct: 129 VLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEA 188

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDL 644
             LF +M  SG+ PN +T+   + AC+H  S+ +GK   + +   G E D+     +V++
Sbjct: 189 LELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNM 248

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
             + G +E A ++   MP P N   W A++  C  H
Sbjct: 249 YGKCGSLEDAREVFERMPHP-NTVSWNAIVAACTQH 283



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 196/388 (50%), Gaps = 14/388 (3%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
             +C +L  L+    +HAH +  G    P     LI  YA+ G L  +  VF    + + 
Sbjct: 512 LNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCGK-NL 570

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +   Y+  + + E++ L+ +M  E        + +VL  CSS  +   G K+H  
Sbjct: 571 VSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GRKIHNI 627

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ G + D ++ T++L  Y     LD+A ++F +M  RD+VSW+++IA   ++    E 
Sbjct: 628 LLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREA 687

Query: 181 LKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           ++MF  M  EGV PD   FVT+L+ A +     SL+ AR +   +  +  + D  +GN+ 
Sbjct: 688 IQMFQRMQLEGVAPDKISFVTVLN-AFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAI 746

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + M+ + G L  A R F +I +R   SW  +++ + + G  ++AL+ F +M +    P+ 
Sbjct: 747 VSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDS 806

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           ITL++VL +C+  G + EG      + R+ G+    ++ G  +++  A  G++ + E+++
Sbjct: 807 ITLVSVLSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYG-CVVDLLARAGRLDQAEELL 865

Query: 357 HAIG-ERNILSWNMLISEYARKGMSKEA 383
             +    + + W  L+S    +G  K A
Sbjct: 866 RKMPVPASYVLWMTLLSACKVQGDEKRA 893



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 2/208 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + +   C++  +  ++H  LL TG+  D   ST L+  Y    SL  +  +F   +  D 
Sbjct: 609 VTVLNGCSSASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDI 668

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRA--CSSLGDLGSGEKVH 118
             W  +I     +    E+I ++ +M  E        + +VL A   SS   L     V 
Sbjct: 669 VSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVE 728

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I   G++ D ++  +I+  +G  G L +AR+ F+++  RD  SW+ I+ ++  + +V 
Sbjct: 729 KLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVE 788

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEAC 206
           + LK+F  M +E   PD +T++S+  AC
Sbjct: 789 QALKLFRRMQQESSRPDSITLVSVLSAC 816


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 215/720 (29%), Positives = 369/720 (51%), Gaps = 10/720 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           GL  +    T +++  A+ G LR +  VF       +  W   +   + N     ++ ++
Sbjct: 99  GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M+      ++F Y   L AC++  +L  G  VHG +++   + D  + TS++  Y + 
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC 218

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G +  A + F +M  R+VVSW++ IA +  + +    + +   MVR GV  +  T  S+ 
Sbjct: 219 GDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSIL 278

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC ++  +R A  IHG VL+ ++ +D  +  + I  Y+  G +  +E+ F +       
Sbjct: 279 LACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNR 338

Query: 264 S-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           S W+A IS  +      ++++   +M      PN     +V  S   + +   G  +H  
Sbjct: 339 SIWSAFISGVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF---GGQLHSS 394

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            I++G       +G AL   Y+ C  + +  KV   + ER+ +SW  +++ +A  G S E
Sbjct: 395 AIKEGF-IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVE 453

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           A      M   G  PD  S+ + LSAC     L  G ++HGH +++  +  F+    I M
Sbjct: 454 AFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFINDCFISM 513

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           YSKC     A  +F+   +K  VMW+SMI G+  NG   EAI+LF  M    + +D    
Sbjct: 514 YSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYIC 573

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            + +  C++I +    K +H   I  G+  D  + ++L  +Y++ G++  +++VFD +S 
Sbjct: 574 SSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV 633

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
            ++V+W+ +ID Y  HG   +A ++F  M+  G++P+ V  +++L ACS +G VE+G  Y
Sbjct: 634 PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNY 693

Query: 623 FNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           FN+MR  +GVEP+LQHY CMVDLL RSG +  A   + SMP   +  +W  LL  CR+H 
Sbjct: 694 FNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHD 753

Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + + +E ++   G  D+G +  LSNI A  G+W+E  ++R  M+  G+ K PG+S +
Sbjct: 754 DTVLGRFVENKIR-EGNYDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 168/577 (29%), Positives = 276/577 (47%), Gaps = 27/577 (4%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           E+V+    K G   +  + T ++    + G L DA +VF        V W++ ++    N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            +    ++MF  MV    EP+  T      AC     L   R++HG VLRR  + D  +G
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            S + MY+KCGD+ +A R F ++  R   SWT  I+ + +      A+    +M+     
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG----PALIEFYAECGKMS 350
            N  T  ++L +CA +  +RE   +H  +++  M     YL      ALI  Y   G + 
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEM-----YLDCVVKEALISTYTNFGFIE 323

Query: 351 ECEKVIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
             EKV    G   N   W+  IS  +   + + +++LL +M   GL P+    AS  S+ 
Sbjct: 324 LSEKVFEEAGTVSNRSIWSAFISGVSNHSLLR-SVQLLRRMFHQGLRPNDKCYASVFSS- 381

Query: 410 GNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
             V S++ G Q+H   IK        V S+L  MYS+C     +Y +FE +Q++  V W 
Sbjct: 382 --VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWT 439

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLIS 527
           +M+ GF  +G+S+EA   F  M L+  + D V+    + AC+    L KGK VH H L  
Sbjct: 440 AMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV 499

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
           YG  +  +I+     MY+KC  +QTA+R+FD+   ++ V WS+MI  Y  +G   +A SL
Sbjct: 500 YG--ETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISL 557

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF----GVEPDLQHYACMVD 643
           F+ M+ + I+ +     +IL  C+         FY   +  +    G+  D    + +V 
Sbjct: 558 FQLMVAASIRIDSYICSSILSLCADIAR----PFYCKPLHGYAIKAGILSDQSVSSSLVK 613

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           + SRSG+++ + K+   +  P +   W  +++G   H
Sbjct: 614 VYSRSGNMDDSRKVFDEISVP-DLVAWTTIIDGYAQH 649



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 149/630 (23%), Positives = 299/630 (47%), Gaps = 28/630 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L     YD    T L+  YA+ G + ++   F      +   W   I  ++ ++ 
Sbjct: 192 VHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDE 251

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++LL  +M+R    I+ +   S+L AC+ +  +    ++HG ++K     D V++ +
Sbjct: 252 PVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEA 311

Query: 136 ILCTYGEFGCLDDARKVFDK---MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           ++ TY  FG ++ + KVF++   +++R +  WS+ I S   N  +   +++   M  +G+
Sbjct: 312 LISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFI-SGVSNHSLLRSVQLLRRMFHQGL 368

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+     S+  +     S+     +H   ++        +G++   MYS+C ++  + +
Sbjct: 369 RPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYK 425

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++++R   SWTAM++ +   G   +A  +F  M+    +P+ ++L  +L +C     
Sbjct: 426 VFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPEC 485

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +GK VH   +R  +  E  ++    I  Y++C  +    ++  A   ++ + W+ +IS
Sbjct: 486 LLKGKEVHGHTLR--VYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMIS 543

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            YA  G  +EA+ L   M    +  DS+  +S LS C ++        +HG+ IK     
Sbjct: 544 GYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILS 603

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D+ V SSL+ +YS+ G  + +  +F+ I    +V W ++I G+ Q+G+S  A+ +F  M 
Sbjct: 604 DQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMV 663

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
              +  D V  ++ + ACS  G +E+G  + +    +YGV  ++     + D+  + G L
Sbjct: 664 QLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRL 723

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE------VTF 603
             A+   DSM  + +++ WS ++    +H       ++  + +++ I+          T 
Sbjct: 724 AEAKYFVDSMPMKPDLMVWSTLLAACRVHDD-----TVLGRFVENKIREGNYDSGSFATL 778

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            NIL   ++SG  EE       M+    EP
Sbjct: 779 SNIL---ANSGDWEEVARIRKTMKGVNKEP 805



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 199/412 (48%), Gaps = 7/412 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVLIK 68
           +R+ +++H  +L T ++ D      LI +Y   G +  S  VF+      +  +W+  I 
Sbjct: 287 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFIS 346

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             + N+    S+ L  +M  +    ++  Y SV    SS+  +  G ++H   IK GF  
Sbjct: 347 G-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKEGFIH 402

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             ++ +++   Y     + D+ KVF++M  RD VSW++++A +  +    E    F +M+
Sbjct: 403 GILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMI 462

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            +G +PD V++ ++  AC     L   + +HGH LR   +    + + FI MYSKC  + 
Sbjct: 463 LDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTF-INDCFISMYSKCQGVQ 521

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A R F    ++    W++MIS Y  +G  ++A+  F  M+      +     ++L  CA
Sbjct: 522 TARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 581

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +      K +H   I+ G+  +   +  +L++ Y+  G M +  KV   I   ++++W 
Sbjct: 582 DIARPFYCKPLHGYAIKAGILSDQS-VSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWT 640

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +I  YA+ G S+ AL +   M   G+ PD+  + S LSAC   G ++ G  
Sbjct: 641 TIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFN 692



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +F S  ++    +LH+  +  G  +     + L   Y+   +++ S  VF+  +E D   
Sbjct: 378 VFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS 437

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  +  +    E+ L +  MI +     +    ++L AC+    L  G++VHG  +
Sbjct: 438 WTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTL 497

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           +  + +   I    +  Y +   +  AR++FD    +D V WSS+I+ Y  N    E + 
Sbjct: 498 RV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAIS 556

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  MV   +  D     S+   C ++      + +HG+ ++  I  D  + +S + +YS
Sbjct: 557 LFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYS 616

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           + G++  + + F +I      +WT +I  Y + G  Q AL  F  M+++   P+ + L++
Sbjct: 617 RSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVS 676

Query: 303 VLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           VL +C+  G + +G    +      G+ PE  +    +++     G+++E +  + ++  
Sbjct: 677 VLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYC-CMVDLLGRSGRLAEAKYFVDSMPM 735

Query: 362 R-NILSWNMLIS 372
           + +++ W+ L++
Sbjct: 736 KPDLMVWSTLLA 747


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 223/735 (30%), Positives = 382/735 (51%), Gaps = 96/735 (13%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG--------------------FDKDDVI 132
           +S   + S+L+ C S+  +    ++H +II CG                    +     +
Sbjct: 29  VSPTHFASLLKECRSVNTV---RQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSL 85

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            T ++ +Y   G   DA  V +++T    V W+ ++  +     +   + +   M+R G 
Sbjct: 86  GTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGT 145

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD  T+    +ACGEL S    R++HG +     + +  + N+ + MYS+CG L  A  
Sbjct: 146 KPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASL 205

Query: 253 TFVKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKMLEV------KEEPNLITLITV 303
            F +I ++      SW ++++ + +    + ALE F +M  +       E  ++I+++ +
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNI 265

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CA L  L + K +H   IR G   +  ++  ALI+ YA+CG M++  KV + +  ++
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFAD-AFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324

Query: 364 ILSWNML-----------------------------------ISEYARKGMSKEALELLV 388
           ++SWN +                                   I+ YA++G S+EAL+   
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-------------IDCKDEFV 435
           QM   G  P+S ++ S LSAC ++G+L  G++IH + +K              D +D  V
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444

Query: 436 QSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            ++LIDMYSKC     A  +F+ I  ++++VV W  MI G+ Q G+S +A+ +F +M   
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504

Query: 494 --CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY------IDTALTDMYA 545
              +  +  T    + AC+++  L  GK +H    +Y  R   Y      +   L DMY+
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIH----AYVTRHHEYEPSVYFVANCLIDMYS 560

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCGD+ TA+ VFDSM +RN VSW++M+  YGMHG+  +A  +F +M  +G  P++++F+ 
Sbjct: 561 KCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLV 620

Query: 606 ILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L+ACSHSG V++G  YF+ MR  + V    +HYAC++DLL+R G ++ A+K I  MP  
Sbjct: 621 LLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPME 680

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            +  IW ALL+ CR+H  +++ +    +L      ++G YTL+SNIYA    W +  ++R
Sbjct: 681 PSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIR 740

Query: 725 SIMEVTGLKKVPGYS 739
            +M+ +G+KK PG S
Sbjct: 741 QLMKKSGIKKRPGCS 755



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 171/675 (25%), Positives = 323/675 (47%), Gaps = 84/675 (12%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGL------------------HYDPPAS--TRLIESYAEM 42
           L + C ++  + ++H  ++  GL                   Y  P S  T ++ SY   
Sbjct: 37  LLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASYLAC 96

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G+ + +  V +      +  W +L++ ++     + +I +  +M+R      +F  P  L
Sbjct: 97  GATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYAL 156

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR--- 159
           +AC  L     G  +HG I   GF+ +  +  +++  Y   G L+DA  VFD++T +   
Sbjct: 157 KACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGID 216

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSM---VREGV---EPDFVTMLSLAEACGELCSLR 213
           DV+SW+SI+A++   ++    L++F  M   V E       D ++++++  AC  L +L 
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALP 276

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + IH + +R     D  + N+ I  Y+KCG +  A + F  +E +   SW AM++ Y 
Sbjct: 277 QIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYT 336

Query: 274 RSGWF-----------------------------------QKALESFVKMLEVKEEPNLI 298
           +SG F                                   Q+AL++F +M+    EPN +
Sbjct: 337 QSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSV 396

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGM-----------GPEYDYLGPALIEFYAECG 347
           T+I++L +CA LG L +G  +H   ++K +             E   +  ALI+ Y++C 
Sbjct: 397 TIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCR 456

Query: 348 KMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVA 403
                  +  +I   ERN+++W ++I  YA+ G S +AL++  +M  + + + P++++++
Sbjct: 457 SFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTIS 516

Query: 404 SSLSACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
             L AC ++ +L++G QIH +V +    +    FV + LIDMYSKCG  + A  +F+ + 
Sbjct: 517 CILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP 576

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-K 519
           +++ V W SM+ G+  +G   EA+++F +M       D+++FL  + ACS+ G +++G  
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLN 636

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
           +       Y V         + D+ A+CG L  A +    M  E + V W A++    +H
Sbjct: 637 YFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVH 696

Query: 579 GQLNDAASLFKQMLD 593
             +  A     ++++
Sbjct: 697 SNVELAEYALNKLVN 711



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 258/596 (43%), Gaps = 93/596 (15%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP---DSFMWAVLIKCYMW 72
           LH  +   G   +      L+  Y+  GSL  + LVFD        D   W  ++  ++ 
Sbjct: 171 LHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVK 230

Query: 73  NN--------FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +        F E S++++ K   E++ I + +  ++L AC+SL  L   +++H   I+ 
Sbjct: 231 GSNPRTALELFSEMSMIVHEKATNERSDIISIV--NILPACASLKALPQIKEIHSYAIRN 288

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW-------------------- 164
           G   D  +  +++ TY + G ++DA KVF+ M  +DVVSW                    
Sbjct: 289 GTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELF 348

Query: 165 ---------------SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
                          S++IA Y       E L  F  M+ +G EP+ VT++SL  AC  L
Sbjct: 349 ENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASL 408

Query: 210 CSLRPARSIHGHVLRRKI------------KIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
            +L     IH + L++ +              D  + N+ I MYSKC    +A   F  I
Sbjct: 409 GALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSI 468

Query: 258 EKR--CTTSWTAMISCYNRSGWFQKALESFVKMLE--VKEEPNLITLITVLGSCAGLGWL 313
            +R     +WT MI  Y + G    AL+ F +M+       PN  T+  +L +CA L  L
Sbjct: 469 PRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAAL 528

Query: 314 REGKSVHCQIIRKG-MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           R GK +H  + R     P   ++   LI+ Y++CG +     V  ++ +RN +SW  ++S
Sbjct: 529 RMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMS 588

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            Y   G  KEAL++  +MQ  G +PD  S    L AC + G +  GL    +   I  +D
Sbjct: 589 GYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL----NYFDIMRRD 644

Query: 433 EFVQSS------LIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNGNSLE- 482
             V +S      +ID+ ++CG  + A+   + +  + S V+W +++  C  + N    E 
Sbjct: 645 YDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEY 704

Query: 483 AIN--------------LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           A+N              L   +Y N     +V  +  +   S I +     WV  K
Sbjct: 705 ALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGK 760



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 209/454 (46%), Gaps = 67/454 (14%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S   L ++  +H++ +  G   D      LI++YA+ GS+  +  VF+  +  D 
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325

Query: 61  FMWAVLIKCY-----------MWNNFFEESILL------------------------YHK 85
             W  ++  Y           ++ N  +E+I L                        + +
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQ 385

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHG-RIIKCGFDKDD-----------VIQ 133
           MI + +  ++    S+L AC+SLG L  G ++H   + KC    D+           ++ 
Sbjct: 386 MILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVY 445

Query: 134 TSILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE- 190
            +++  Y +      AR +FD +    R+VV+W+ +I  Y    D ++ LK+F  M+ + 
Sbjct: 446 NALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKP 505

Query: 191 -GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDL 247
             V P+  T+  +  AC  L +LR  + IH +V R          + N  I MYSKCGD+
Sbjct: 506 YAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDV 565

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            +A   F  + KR   SWT+M+S Y   G  ++AL+ F KM +    P+ I+ + +L +C
Sbjct: 566 DTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYAC 625

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPA-----LIEFYAECGKMSECEKVIHAIG-E 361
           +  G + +G + +  I+R+    +YD +  A     +I+  A CG++ +  K I  +  E
Sbjct: 626 SHSGMVDQGLN-YFDIMRR----DYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPME 680

Query: 362 RNILSWNMLISE---YARKGMSKEALELLVQMQT 392
            + + W  L+S    ++   +++ AL  LV M+ 
Sbjct: 681 PSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 714


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 223/736 (30%), Positives = 382/736 (51%), Gaps = 98/736 (13%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG--------------------FDKDDVI 132
           +S   + S+L+ C S+  +    ++H +II  G                    +     +
Sbjct: 29  VSPTHFASLLKECRSVNTV---RQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSL 85

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            T ++ +Y   G   DA  V +++     V W+ ++ ++ +   +   + +   M+R G 
Sbjct: 86  GTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGT 145

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD  T+    +ACGEL S R   + HG +     + +  + N+ + MYS+ G L  A  
Sbjct: 146 KPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASL 205

Query: 253 TFVKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKMLEV------KEEPNLITLITV 303
            F +I ++      SW ++++ + +    + AL+ F +M  +       E  ++I+++ +
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNI 265

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CA L  L + K +H   IR G   +  ++  ALI+ YA+CG M +   V + +  ++
Sbjct: 266 LPACASLKALPQTKEIHSYAIRNGTFAD-AFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 364 ILSWNML-----------------------------------ISEYARKGMSKEALELLV 388
           ++SWN +                                   I+ YA++G  +EAL+   
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-------------IDCKDEFV 435
           QM  +G  P+S ++ S LSAC ++G+L  G++ H + +K              D +D  V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 436 QSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            ++LIDMYSKC     A  +F  I  ++++VV W  MI G+ Q G+S +A+ LF +M   
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504

Query: 494 --CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY------IDTALTDMYA 545
              +  +  T    + AC+++  L  GK +H    +Y  R   Y      +   L DMY+
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIH----AYVTRHHEYESSVYFVANCLIDMYS 560

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCGD+ TA+ VFDSM +RN VSW++M+  YGMHG+  +A  +F +M  +G  P++++F+ 
Sbjct: 561 KCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLV 620

Query: 606 ILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L+ACSHSG V++G  YF+ MR  +GV    QHYAC++DLL+RSG ++ A+K I  MP  
Sbjct: 621 LLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPME 680

Query: 665 ANGSIWGALLNGCRIHKRIDVMK-TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
            + +IW ALL+ CR+H  +++ +  + K +S+   ND G YTL+SNIYA    W +  ++
Sbjct: 681 PSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEND-GSYTLISNIYATARRWKDVARI 739

Query: 724 RSIMEVTGLKKVPGYS 739
           R +M+ +G+KK PG S
Sbjct: 740 RQLMKKSGIKKRPGCS 755



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 173/674 (25%), Positives = 318/674 (47%), Gaps = 84/674 (12%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGL------------------HYDPPAS--TRLIESYAEM 42
           L + C ++  + ++H  ++  GL                   Y  P S  T ++ SY   
Sbjct: 37  LLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYLAC 96

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G+   +  V +      +  W +L++ ++     + +I +  +M+R      +F  P  L
Sbjct: 97  GATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYAL 156

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR--- 159
           +AC  L    SG   HG I   GF+ +  +  +++  Y   G L+DA  VFD++T +   
Sbjct: 157 KACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGID 216

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSM---VREGV---EPDFVTMLSLAEACGELCSLR 213
           DV+SW+SI+A++   ++    L +F  M   V E       D ++++++  AC  L +L 
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALP 276

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + IH + +R     D  + N+ I  Y+KCG +  A   F  +E +   SW AM++ Y 
Sbjct: 277 QTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYT 336

Query: 274 RSGWF-----------------------------------QKALESFVKMLEVKEEPNLI 298
           +SG F                                   Q+AL++F +M+    EPN +
Sbjct: 337 QSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSV 396

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGM-----------GPEYDYLGPALIEFYAECG 347
           T+I++L +CA LG L +G   H   ++K +             E   +  ALI+ Y++C 
Sbjct: 397 TIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCR 456

Query: 348 KMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVA 403
                  + ++I   ERN+++W ++I  YA+ G S +AL+L  +M  + + + P++++++
Sbjct: 457 SFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTIS 516

Query: 404 SSLSACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
             L AC ++ SL++G QIH +V +    +    FV + LIDMYSKCG  + A  +F+ + 
Sbjct: 517 CILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP 576

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-K 519
           +++ V W SM+ G+  +G   EA+++F +M       D+++FL  + ACS+ G +++G  
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLD 636

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
           +       YGV         + D+ A+ G L  A +    M  E +   W A++    +H
Sbjct: 637 YFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVH 696

Query: 579 GQLNDAASLFKQML 592
             +  A     +++
Sbjct: 697 SNVELAEYALNKLV 710


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 217/673 (32%), Positives = 363/673 (53%), Gaps = 21/673 (3%)

Query: 80  ILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCT 139
           +L +H+ + E+    N +   +   CS L    S  ++H + +K G   D  I T +   
Sbjct: 128 LLKFHEWLMER---RNLLVKLLETCCSKL----SISQLHSQCLKAGLVHDSFIVTKLNVL 180

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-----VREGVEP 194
           Y  +  +  A K+F +   R V  W++++ SY    +  E L +F  M     V     P
Sbjct: 181 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 240

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAER 252
           D  ++    ++C  L  L   + IHG +  +K++IDG +  G++ I +Y+KCG +  A +
Sbjct: 241 DNYSVSIALKSCAGLRKLLLGKVIHGFL--KKVRIDGDMFVGSALIDLYTKCGQMNDAVK 298

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLG 311
            F++  K     WT++IS Y +SG  + AL  F +M+   K  P+ +TL++V  +CA L 
Sbjct: 299 VFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 358

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
             + G+SVH  + RKG+  +   L  +L+  Y + G +     +   + +++I+SW+ ++
Sbjct: 359 NFKLGRSVHGFVKRKGLDNKL-CLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 417

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           + YA  G   + L+L  +M    + P+  +V S L AC  + +L+ G++IH   +    +
Sbjct: 418 ACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 477

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            E  V ++L+DMY KC     A  LF R+ +K V+ W  +  G+  NG   E++ +F  M
Sbjct: 478 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 537

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
             +    D +  +  +   S +G L++   +H  +I  G   + +I  +L ++YAKC  +
Sbjct: 538 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSI 597

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWA 609
           + A +VF  M+ ++VV+WS++I  YG HGQ  +A  LF QM + S  KPN VTF++IL A
Sbjct: 598 EDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSA 657

Query: 610 CSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSHSG ++EG   F+ M   + ++P+ +HYA MVDLL R G+++ A  +I++MP  A   
Sbjct: 658 CSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPD 717

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           IWGALL  CRIH+ I + +   K L     N  GYY LLSNIY+ + NW    K+R +++
Sbjct: 718 IWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVK 777

Query: 729 VTGLKKVPGYSTI 741
              L K+ G S +
Sbjct: 778 EKRLNKIVGQSVV 790



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/615 (26%), Positives = 316/615 (51%), Gaps = 13/615 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  +C +   +++LH+  L  GL +D    T+L   YA   S+  +  +F        ++
Sbjct: 145 LLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYL 204

Query: 63  WAVLIKCYMWNNFFEESILLYHKM-----IREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           W  L++ Y +   + E++ L+ +M     +  +    N+     L++C+ L  L  G+ +
Sbjct: 205 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVI 264

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG + K   D D  + ++++  Y + G ++DA KVF +    DVV W+SII+ Y  +   
Sbjct: 265 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSP 324

Query: 178 SEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
              L  F  M V E V PD VT++S+A AC +L + +  RS+HG V R+ +     L NS
Sbjct: 325 ELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANS 384

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + +Y K G + +A   F ++  +   SW+ M++CY  +G     L+ F +ML+ + +PN
Sbjct: 385 LLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPN 444

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T+++VL +CA +  L EG  +H   +  G   E   +  AL++ Y +C    +   + 
Sbjct: 445 WVTVVSVLRACACISNLEEGMKIHELAVNYGFEME-TTVSTALMDMYMKCFSPEKAVDLF 503

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           + + ++++++W +L S YA  GM  E++ +   M + G  PD+ ++   L+    +G LQ
Sbjct: 504 NRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQ 563

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
             + +H  VIK   + ++F+ +SLI++Y+KC     A  +F+ +  K VV W+S+I  + 
Sbjct: 564 QAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 623

Query: 476 QNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKD 533
            +G   EA+ LF+QM  +   + + VTF++ + ACS+ G +++G  +   +++ Y ++ +
Sbjct: 624 FHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPN 683

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
                 + D+  + G+L  A  V ++M  +     W A++    +H  +       K + 
Sbjct: 684 SEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLF 743

Query: 593 DSGIKPNEVTFMNIL 607
              + PN   +  +L
Sbjct: 744 --SLDPNHAGYYILL 756


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 198/648 (30%), Positives = 350/648 (54%), Gaps = 6/648 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + ++L+ CSS  ++  G +VH  +   GF++++++   ++  Y + G + +A++VF+ + 
Sbjct: 8   FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            +DV +W+ +I  Y    D    L MF+ M  E V P  VT +++  AC    SL+    
Sbjct: 68  RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 127

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IHG +L++  + D  +G + I MY+KCG +  A  +F ++E R   SWTAMI+   +   
Sbjct: 128 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 187

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           F  A   + +M      PN ITL TV  +     +L EGK ++  +  + M  +   +  
Sbjct: 188 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNS 247

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A+   +   G + +  ++   + +R++++WN++I+ Y +     EA+ L  ++Q  G+  
Sbjct: 248 AM-NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKA 306

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  +    L+   ++ SL  G  IH  V +    +D  V ++L+ +Y +C     A+ +F
Sbjct: 307 NDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIF 366

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             +  K V+ W  M   + QNG   EA+ LF +M L        T +  +  C+++  L+
Sbjct: 367 VDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQ 426

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           KG+ +H  +I  G R ++ ++TAL +MY KCG +  A+ VF+ M++R+++ W++M+  Y 
Sbjct: 427 KGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYA 486

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDL 635
            HG  ++   LF QM   G K + V+F+++L A SHSGSV +G  YF AM + F + P  
Sbjct: 487 QHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTP 546

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           + Y C+VDLL R+G I+ A  ++  +    P +G +W  LL  CR H + D  K   +++
Sbjct: 547 ELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP-DGILWMTLLGACRTHNKTDQAKAAAEQV 605

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                + +G Y +LSN+YA  G+WD   ++R +M   G+KK PG S+I
Sbjct: 606 LERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSI 653



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/656 (25%), Positives = 326/656 (49%), Gaps = 41/656 (6%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  N+    R+H H+   G   +      LI+ YA+ GS+  ++ VF+  +  D F W  
Sbjct: 17  SAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTR 76

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y     ++ ++ ++++M  E    +   Y ++L AC+S   L  G ++HG+I++ G
Sbjct: 77  MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 136

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F+ D  + T+++  Y + G +  A   F ++  RDVVSW+++IA+   +   +    ++ 
Sbjct: 137 FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYR 196

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M  +GV P+ +T+ ++  A G+   L   + I+  V  R ++ D  + NS + M+   G
Sbjct: 197 RMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAG 256

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L  A R F  +  R   +W  +I+ Y ++  F +A+  F ++ +   + N IT + +L 
Sbjct: 257 LLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLN 316

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
               L  L +GK +H +++++        +  AL+  Y  C    +  K+   +G ++++
Sbjct: 317 VYTSLTSLAKGKVIH-ELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVI 375

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           +W ++   YA+ G  KEAL+L  +MQ  G  P S ++ + L  C ++ +LQ G QIH H+
Sbjct: 376 TWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHI 435

Query: 426 IKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           I+   + E  V+++LI+MY KCG    A  +FE++ ++ +++WNSM+  + Q+G   E +
Sbjct: 436 IENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETL 495

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF+QM L+  + D V+F++ + A S+ G +  G      ++     +D  I T   ++Y
Sbjct: 496 QLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAML-----QDFSI-TPTPELY 549

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
                                     ++D  G  G++ +A  +  ++  SG  P+ + +M
Sbjct: 550 G------------------------CVVDLLGRAGRIQEAVDIVLKL--SGCLPDGILWM 583

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH---YACMVDLLSRSGDIEGAFKM 657
            +L AC      ++ K     +    +E D  H   Y  + ++ + +GD +G  +M
Sbjct: 584 TLLGACRTHNKTDQAKAAAEQV----LERDPSHSGAYVVLSNVYAAAGDWDGVNRM 635



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 250/506 (49%), Gaps = 3/506 (0%)

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD    ++L + C    ++   R +H HV  R  + +  +    I MY++CG +  A++
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +E++   +WT MI  Y + G + +AL  F +M E    P  +T + +L +CA    
Sbjct: 62  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L++G  +H QI+++G   +  ++G ALI  Y +CG +         +  R+++SW  +I+
Sbjct: 122 LKDGMEIHGQILQQGFEGDV-FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCK 431
              +      A  L  +MQ  G++P+  ++ +  +A G+   L  G  I+  V  ++   
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V +S ++M+   G    A  LFE +  + VV WN +I  + QN N  EA+ LF ++ 
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            + ++ +++TF+  +   +++  L KGK +H  +   G  +D+ + TAL  +Y +C    
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPG 360

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A ++F  M  ++V++W+ M   Y  +G   +A  LF++M   G +P   T + +L  C+
Sbjct: 361 QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 420

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           H  ++++G+   + +   G   ++     ++++  + G +  A  +   M    +  +W 
Sbjct: 421 HLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWN 479

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTG 697
           ++L     H   D    +  ++ + G
Sbjct: 480 SMLGAYAQHGYYDETLQLFNQMQLDG 505



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 106/205 (51%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + ++ S T+L K   +H  +   G   D   +T L+  Y    +   +  +F      D 
Sbjct: 315 LNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDV 374

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W V+   Y  N F +E++ L+ +M  E    ++    +VL  C+ L  L  G ++H  
Sbjct: 375 ITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSH 434

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           II+ GF  + V++T+++  YG+ G + +AR VF+KM  RD++ W+S++ +Y  +    E 
Sbjct: 435 IIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDET 494

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEA 205
           L++F+ M  +G + D V+ +S+  A
Sbjct: 495 LQLFNQMQLDGEKADAVSFVSVLSA 519



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 1/204 (0%)

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D   F+  +Q CS+   ++ G+ VH  +   G  ++  +   L  MYA+CG +  AQ+VF
Sbjct: 4   DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           + +  ++V +W+ MI  Y   G  + A  +F QM +  + P +VT++ IL AC+ + S++
Sbjct: 64  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           +G      +   G E D+     ++++ ++ G + GA+     +      S W A++  C
Sbjct: 124 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS-WTAMIAAC 182

Query: 678 RIHKRIDVMKTIEKELSVTGTNDN 701
             H +  + + + + + + G   N
Sbjct: 183 VQHDQFALARWLYRRMQLDGVVPN 206


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 207/653 (31%), Positives = 341/653 (52%), Gaps = 12/653 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD-------VIQTSILCTYGEFGCLDDAR 150
           Y +++ ACS L  L  G +VH  ++       D       V+   ++  YG     D AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           +VFD+M +R+ VSW+S+IA++  N    + L +F SM+R G   D   + S   AC EL 
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            +   R +H H L+ +   D  + N+ + MYSK G +      F +I+ +   SW ++I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 271 CYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
            + + G+  +AL+ F +M+ E    PN     +   +C  +G    G+ +H   I+  + 
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  Y+G +L + YA C  +       + I   +++SWN +++ Y+ +G+  EAL L  +
Sbjct: 287 RDL-YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+  GL PD  +V   L AC    +L  G  IH +++K+    D  V +SL+ MY++C  
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + A  +F  I+ + VV WNS++    Q+ +  E + LF  +  +   +D ++    + A
Sbjct: 406 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 465

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVS 567
            + +G  E  K VH      G+  D  +   L D YAKCG L  A R+F+ M + R+V S
Sbjct: 466 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           WS++I  Y   G   +A  LF +M   GI+PN VTF+ +L ACS  G V EG +Y++ M 
Sbjct: 526 WSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 585

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             +G+ P  +H +C+VDLL+R+G +  A   I  MPF  +  +W  LL   ++H  +++ 
Sbjct: 586 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMG 645

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           K   + +     + +  Y LL NIYA  GNW+EF +++  M  +G+KK PG S
Sbjct: 646 KRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKS 698



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 180/649 (27%), Positives = 314/649 (48%), Gaps = 25/649 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTG-------LHYDPPASTRLIESYAEMGSLRSSRLVF 52
           L  +C+ LR L    R+H HL+ +        L  +      LI  Y    +  S+R VF
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109

Query: 53  DTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG 112
           D     +   WA +I  ++ N    +++ L+  M+R       F   S +RAC+ LGD+G
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 169

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           +G +VH   +K     D ++Q +++  Y + G +DD   +F+++  +D++SW SIIA + 
Sbjct: 170 TGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 229

Query: 173 DNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
                 E L++F  M+ EG   P+     S   ACG + S      IHG  ++ ++  D 
Sbjct: 230 QQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 289

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            +G S   MY++C +L SA   F +IE     SW ++++ Y+  G   +AL  F +M + 
Sbjct: 290 YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDS 349

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P+ IT+  +L +C G   L  G+ +H  +++ G+  +      +L+  YA C  +S 
Sbjct: 350 GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN-SLLSMYARCSDLSS 408

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              V H I ++++++WN +++  A+    +E L+L   +       D  S+ + LSA   
Sbjct: 409 AMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAE 468

Query: 412 VGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNS 469
           +G  ++  Q+H +  K     D  + ++LID Y+KCG  + A  LFE +   + V  W+S
Sbjct: 469 LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSS 528

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISY 528
           +I G+ Q G + EA +LF +M    +  + VTF+  + ACS +G + +G + +  +   Y
Sbjct: 529 LIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEY 588

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASL 587
           G+       + + D+ A+ G L  A    D M  E +++ W  ++    MH  +      
Sbjct: 589 GIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRA 648

Query: 588 FKQMLDSGIKPNE----VTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
            + +L+  I P+     V   NI  A   SG+  E      AMR  GV+
Sbjct: 649 AEGILN--IDPSHSAAYVLLCNIYAA---SGNWNEFARLKKAMRTSGVK 692


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 219/733 (29%), Positives = 384/733 (52%), Gaps = 9/733 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA +  + +   P     L+  Y + GSL  ++  FD     D+  WA LI+ +     
Sbjct: 20  VHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGD 79

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDL-GSGEKVHGRIIKCGFDKDDVIQT 134
            E+++ L+  M  E     N  + +VL ACS+  +L   G ++HG +     + D  + T
Sbjct: 80  SEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVST 139

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++L  YG+   ++DARKVFD +  + VV W+++I +Y       + +++F++M+ EGV+ 
Sbjct: 140 TLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKA 199

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAER 252
           + +T + + +AC +L  L  A+ +   V  R+     D     + +  Y  CGDL  A R
Sbjct: 200 ERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFR 259

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F +       + TAMI+ Y +   + +ALE F  ML    + + I  + VL +C+G   
Sbjct: 260 AFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRG 318

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L EG+ +H   +R+     +   G ALI  Y +CG + E  +V  ++  R+++SWN +I+
Sbjct: 319 LEEGRIIH-GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIA 377

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            + +     EAL LL  MQ  G+  D  S  ++L  C    +L  G  IH  +++   K 
Sbjct: 378 AHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKA 437

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY-QNGNSLEAINLFHQM 490
           D  + ++++DMY  C   + A  +F  ++ +  V WN+MI  +  Q   S EA+ LF QM
Sbjct: 438 DVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQM 497

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            L+    D ++F+ A+ AC+    L +GK +H ++   G+  ++ +  A+ +MYAK G L
Sbjct: 498 QLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTL 557

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+++F  M   +V+SW+ MI  +  HG  +     F++M   G  PN+VTF++++ AC
Sbjct: 558 VLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSAC 617

Query: 611 SHSGSVEEG-KFYFNAMRIF-GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           SH G V++G + + + +  F  + P  +HY CMVDL++R+G ++ A K I + P   +  
Sbjct: 618 SHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRV 677

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           I   +L   ++HK ++  +   + L     + +  Y +LSN+Y E G  DE  K+R +M 
Sbjct: 678 IHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMY 737

Query: 729 VTGLKKVPGYSTI 741
              ++K P +S+I
Sbjct: 738 EKNIRKEPAFSSI 750



 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 186/624 (29%), Positives = 312/624 (50%), Gaps = 22/624 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L   +    L  G++VH RI K   D+   +   ++  Y + G L DA+  FD+M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP---DFVTMLSLAEACGELCSLRP 214
            +D ++W+ +I ++    D  + L +F SM  EGV P   +FV +L    A  EL  L  
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPEL--LEE 118

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R IHG +    ++ D  +  + + MY KC  +  A + F  I  +    W AMI+ Y +
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
               ++A++ F  ML    +   IT I VL +C+ L  L   K V   +  +    E+D+
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER----EHDH 234

Query: 335 L-----GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           L       AL+ FY  CG + +  +         IL+  M I++Y ++    EALEL   
Sbjct: 235 LHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAM-ITQYTQRERWDEALELFKV 293

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS--SLIDMYSKCG 447
           M   G+  D  +  + L+AC     L+ G  IHG + +I   D  V +  +LI+MY KCG
Sbjct: 294 MLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRF-DRHVNAGNALINMYGKCG 352

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  +F  +Q + V+ WN++I    Q+    EA++L H M L+ ++ D+++F+ A+ 
Sbjct: 353 SLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALP 412

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            C+    L KG+ +H  ++  G++ D+ +D A+ DMY  C     A RVF +M  R+ VS
Sbjct: 413 LCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS 472

Query: 568 WSAMIDCYGMHGQL-NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           W+AMI  Y    +L ++A  LF+QM   G  P+ ++F+  L AC+   S+ EGK   + +
Sbjct: 473 WNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRI 532

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           R  G+E ++     ++++ ++SG +  A KM   MP P   S W  +++    H   D +
Sbjct: 533 RETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVIS-WNGMISAFAQHGHADQV 591

Query: 687 KTIEKELSVTG--TNDNGYYTLLS 708
               + ++  G   ND  + +++S
Sbjct: 592 LRFFRRMNHEGKLPNDVTFVSVVS 615



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 265/551 (48%), Gaps = 16/551 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H  L  T +  D   ST L+  Y +  S+  +R VFD  +      W  +I  Y   +
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD--KDDVI 132
             E++I +++ M+ E        +  VL ACS L DL   + V   + +   D   D   
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            T+++  YG  G L+ A + F +    +++  +++I  Y       E L++F  M+ EGV
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSA 250
           + D +  +++  AC     L   R IHG +  R+I+ D  +  GN+ I MY KCG L  A
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFM--REIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              F  ++ R   SW  +I+ + +     +AL     M     + + I+ +  L  CA  
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATS 417

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L +G+ +H  I+  G+  +   L  A+++ Y  C    +  +V  A+  R+ +SWN +
Sbjct: 418 EALAKGRMIHSWIVESGIKADV-MLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAM 476

Query: 371 ISEY-ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           I+ Y A+  +S EAL L  QMQ  G MPD  S  ++LSAC    SL  G  +H  + +  
Sbjct: 477 ITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETG 536

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            +    V +++++MY+K G   LA  +F ++    V+ WN MI  F Q+G++ + +  F 
Sbjct: 537 LESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFR 596

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH----HKLISYGVRKDIYIDTALTDMY 544
           +M       ++VTF++ + ACS+ G ++ G  +     H   +   R + Y    + D+ 
Sbjct: 597 RMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYY--CMVDLI 654

Query: 545 AKCGDLQTAQR 555
           A+ G L  A++
Sbjct: 655 ARAGKLDAAEK 665



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 151/365 (41%), Gaps = 35/365 (9%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL  +   L K   +H+ ++ +G+  D      +++ Y    S   +  VF   K  D 
Sbjct: 411 LPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQ 470

Query: 61  FMWAVLIKCYMWN-NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             W  +I  Y        E++LL+ +M           + + L AC++   L  G+ +H 
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHD 530

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI + G + +  +  ++L  Y + G L  ARK+F KM   DV+SW+ +I+++  +    +
Sbjct: 531 RIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQ 590

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+ F  M  EG  P+ VT +S+  AC            HG +++  +++          
Sbjct: 591 VLRFFRRMNHEGKLPNDVTFVSVVSACS-----------HGGLVKDGVQL---------- 629

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                   +S    F  I  R    +  M+    R+G    A E F+    +K  P+ + 
Sbjct: 630 -------FVSLLHDFPTISPR-AEHYYCMVDLIARAGKLDAA-EKFIAAAPLK--PDRVI 678

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             T+LG+      +   +     ++   + P+       L   Y E GK  E  K+   +
Sbjct: 679 HSTMLGASKVHKDVERARKSAEHLME--LTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLM 736

Query: 360 GERNI 364
            E+NI
Sbjct: 737 YEKNI 741


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 230/778 (29%), Positives = 398/778 (51%), Gaps = 40/778 (5%)

Query: 2   PLFRSC-TNLRKLTRLHAHLLVTGLHYDP-----------PASTRLIESYAEMGSLRSSR 49
           PL  S  +N+     LH+HL    L +              A ++ + S +E   L+ ++
Sbjct: 16  PLLPSIKSNVTSFRFLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQ 75

Query: 50  LVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
            +FD F   D   W+ LI  Y     F ++  L+ KM+ E    + F   S+L+   S G
Sbjct: 76  QLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTG 135

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK--MTSRDVVSWSSI 167
           ++G   ++HG  I+ GF  D  I+ + +  Y   G L+DA++VFD+  + + D++ W+SI
Sbjct: 136 EIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSI 195

Query: 168 IASYFDNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           IA+Y  +    E L++F  MV  GV  P  +T  S+  ACG     +    +HG +++  
Sbjct: 196 IAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAG 255

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           ++    L NS +  Y KCG+L  A + F +I ++   SW AMI+   + G  + AL  F 
Sbjct: 256 LEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFR 314

Query: 287 KMLEVKE--EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           +ML+V+   +PN +T +++L + +GL  LR G+ +H  I R  +  +   +  +LI FY+
Sbjct: 315 RMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTS-ITNSLITFYS 373

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +C ++ +  ++   +  R+I+SWN +++ Y +        ++  +M   G+ PDS S+  
Sbjct: 374 KCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTI 433

Query: 405 SLSACGNVGS----LQLGLQIHGHVIKIDCKDEF---VQSSLIDMYSKCGFKNLAYLLFE 457
             +A     S     + G +IHG++++          V ++++ MY+K      A  +F+
Sbjct: 434 IFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFK 493

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            ++ +    WN+M+ G+ +N    + + +F  +      +D V+    + +C  +  L+ 
Sbjct: 494 GMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQL 553

Query: 518 GKWVHHKLISYGVRKD-------IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           GK  H  +      +D       + I+ AL  MY+KCG ++ A +VF  M  ++V SW+A
Sbjct: 554 GKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTA 613

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI     HG   +A  LF++M   GIKPN+VTF+ +L AC+H G V+EG +YF++M   +
Sbjct: 614 MITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDY 673

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIH---SMPFPANGSI---WGALLNGCRIHKRI 683
           G+ P ++HYACM+DL  RSG  + A  ++    ++  P +  I   W  LL  C   K++
Sbjct: 674 GLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQL 733

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           D+      ++      D   Y LL+N+YA  G W++  KVR  M   GL+K  G S I
Sbjct: 734 DLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWI 791


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 208/647 (32%), Positives = 354/647 (54%), Gaps = 16/647 (2%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           ++ R C+   +L S + +H R++     ++  I   ++  Y   G +  AR  FD + +R
Sbjct: 59  TLFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFH-SMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           DV +W+ +I+ Y    + SE ++ F   M+  G+ PD+ T  S+ +AC  +        I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H   L+     D  +  S I +YS+   + +A   F ++  R   SW AMIS Y +SG  
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++AL +    L   +    +T++++L +C   G    G ++H   I+ G+  E  ++   
Sbjct: 233 KEAL-TLSNGLRAMDS---VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL-FVSNK 287

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI+ YAE G++ +C+KV   +  R+++SWN +I  Y        A+ L  +M+   + PD
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
             ++ S  S    +G ++    + G  ++     +D  + ++++ MY+K G  + A  +F
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQL 515
             +    V+ WN++I G+ QNG + EAI +++ M     +  ++ T+++ + ACS  G L
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
            +G  +H +L+  G+  D+++ T+L DMY KCG L+ A  +F  +   N V W+ +I C+
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 527

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPD 634
           G HG    A  LFK+MLD G+KP+ +TF+ +L ACSHSG V+EG++ F  M+  +G+ P 
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           L+HY CMVD+  R+G +E A K I SM    + SIWGALL+ CR+H  +D+ K   + L 
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 647

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                  GY+ LLSN+YA  G W+   ++RSI    GL+K PG+S++
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/610 (28%), Positives = 316/610 (51%), Gaps = 14/610 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LFR CTNL+    LHA L+V+    +   S +L+  Y  +G++  +R  FD  +  D + 
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
           W ++I  Y       E I  +   +       ++  +PSVL+AC ++ D   G K+H   
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K GF  D  +  S++  Y  +  + +AR +FD+M  RD+ SW+++I+ Y  + +  E L
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            + + +       D VT++SL  AC E        +IH + ++  ++ +  + N  I +Y
Sbjct: 237 TLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           ++ G L   ++ F ++  R   SW ++I  Y  +    +A+  F +M   + +P+ +TLI
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++    + LG +R  +SV    +RKG   E   +G A++  YA+ G +     V + +  
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQ 420
            +++SWN +IS YA+ G + EA+E+   M+  G +  +  +  S L AC   G+L+ G++
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +HG ++K     D FV +SL DMY KCG    A  LF +I + + V WN++I     +G+
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDT 538
             +A+ LF +M    ++ D +TF+T + ACS+ G +++G+W    +   YG+   +    
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            + DMY + G L+TA +   SMS + +   W A++    +HG ++      + + +  ++
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE--VE 650

Query: 598 PNEVTFMNIL 607
           P  V +  +L
Sbjct: 651 PEHVGYHVLL 660



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 9/232 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR+  +LH  LL  GL+ D    T L + Y + G L  +  +F      +S
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  LI C+ ++   E++++L+ +M+ E     +  + ++L ACS  G +  G+     
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577

Query: 121 I-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVS 178
           +    G          ++  YG  G L+ A K    M+ + D   W +++++   + +V 
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637

Query: 179 EGLKMFHSMVREGVEPDFV---TMLS-LAEACGELCSLRPARSI-HGHVLRR 225
            G K+    + E VEP+ V    +LS +  + G+   +   RSI HG  LR+
Sbjct: 638 LG-KIASEHLFE-VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 210/733 (28%), Positives = 375/733 (51%), Gaps = 4/733 (0%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           RS +  R+  ++H  +  +GL  D   ST ++  Y   G +  SR VF+   + +   W 
Sbjct: 171 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 230

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            L+  Y      EE I +Y  M  E    +      V+ +C  L D   G ++ G++IK 
Sbjct: 231 SLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKS 290

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G +    ++ S++  +G  G +D A  +F++++ RD +SW+SI+A+Y  N  + E  ++F
Sbjct: 291 GLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIF 350

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           + M R   E +  T+ +L    G++   +  R IHG V++        + N+ + MY+  
Sbjct: 351 NLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 410

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G    A+  F ++  +   SW ++++ +   G    AL     M+   +  N +T  + L
Sbjct: 411 GRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSAL 470

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C    +  +G+ +H  ++  G+  +   +G AL+  Y + G MS   +V+  +  R++
Sbjct: 471 AACFSPEFFDKGRILHGLVVVSGL-FDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDV 529

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHG 423
           ++WN LI  YA      +AL     ++  G+  +  +V S LSAC   G L + G  +H 
Sbjct: 530 VAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHA 589

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +++    + DE V++SLI MY+KCG  + +  LF  +  +S++ WN+++     +G+  E
Sbjct: 590 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEE 649

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            + L  +M    L +D+ +F   + A + +  LE+G+ +H   +  G   D +I  A  D
Sbjct: 650 VLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAAD 709

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG++    ++      R++ SW+ +I   G HG   +    F +ML+ GIKP  VT
Sbjct: 710 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVT 769

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L ACSH G V++G  Y++ + + FG+EP ++H  C++DLL RSG +  A   I  M
Sbjct: 770 FVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 829

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   N  +W +LL  C+IH+ +D  +   + LS     D+  + L SN++A  G W++  
Sbjct: 830 PMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVE 889

Query: 722 KVRSIMEVTGLKK 734
            VR  M    +KK
Sbjct: 890 NVRKQMGFKNIKK 902



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 184/685 (26%), Positives = 338/685 (49%), Gaps = 17/685 (2%)

Query: 8   TNLRKLTR------LHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           T   ++TR      LHA L V GL       +  LI  Y + G ++ +R +FD     + 
Sbjct: 66  TGFSQITRETTGRALHA-LCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNE 124

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL-GSGEKVHG 119
             W  ++   +    + E +  + KM       S+F+  S++ AC   G +   G +VHG
Sbjct: 125 VSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 184

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + K G   D  + T+IL  YG +G +  +RKVF++M  R+VVSW+S++  Y D  +  E
Sbjct: 185 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 244

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + ++ SM  EGVE +  +M  +  +CG L      R I G V++  ++    + NS I 
Sbjct: 245 VIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLIS 304

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           M+   G++  A   F +I +R T SW ++++ Y ++G  +++   F  M    +E N  T
Sbjct: 305 MFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTT 364

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + T+L     +   + G+ +H  +++ G       +   L+  YA  G+  E + V   +
Sbjct: 365 VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVV-CVCNTLLRMYAGAGRSEEADLVFKQM 423

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             ++++SWN L++ +   G S +AL +L  M   G   +  +  S+L+AC +      G 
Sbjct: 424 PTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGR 483

Query: 420 QIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +HG V+     D + + ++L+ MY K G  + +  +  ++ ++ VV WN++I G+ +N 
Sbjct: 484 ILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENE 543

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ-LEKGKWVHHKLISYGVRKDIYID 537
           +  +A+  F  + +  +  + +T ++ + AC   G  LE+GK +H  ++S G   D ++ 
Sbjct: 544 DPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVK 603

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L  MYAKCGDL ++Q +F+ +  R++++W+A++     HG   +   L  +M   G+ 
Sbjct: 604 NSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLS 663

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            ++ +F   L A +    +EEG+         G E D   +    D+ S+ G+I    KM
Sbjct: 664 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKM 723

Query: 658 IHSMPFPANGSI--WGALLNGCRIH 680
              +P   N S+  W  L++    H
Sbjct: 724 ---LPPSVNRSLPSWNILISALGRH 745



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 293/586 (50%), Gaps = 12/586 (2%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
           +G  +H   +K G  +  V+ T+ L   Y +FG +  AR +FDKM  R+ VSW+++++  
Sbjct: 76  TGRALHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGI 134

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL-RPARSIHGHVLRRKIKID 230
                  EG++ F  M   G++P    + SL  ACG   S+ R    +HG V +  +  D
Sbjct: 135 VRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD 194

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             +  + + +Y   G +  + + F ++  R   SWT+++  Y+  G  ++ ++ +  M  
Sbjct: 195 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRG 254

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              E N  ++  V+ SC  L     G+ +  Q+I+ G+  +   +  +LI  +   G + 
Sbjct: 255 EGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKL-AVENSLISMFGNMGNVD 313

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               + + I ER+ +SWN +++ YA+ G  +E+  +   M+ +    +S +V++ LS  G
Sbjct: 314 YANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLG 373

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           +V   + G  IHG V+K+       V ++L+ MY+  G    A L+F+++  K ++ WNS
Sbjct: 374 DVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNS 433

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           ++  F  +G SL+A+ +   M      ++ VTF +A+ AC +    +KG+ +H  ++  G
Sbjct: 434 LMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSG 493

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +  +  I  AL  MY K G + T++RV   M  R+VV+W+A+I  Y  +   + A + F+
Sbjct: 494 LFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQ 553

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGS-VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
            +   G+  N +T +++L AC   G  +E GK     +   G E D      ++ + ++ 
Sbjct: 554 TLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 613

Query: 649 GDIEGAFKMIHSMPFPANGSI--WGALLNGCRIHKR-IDVMKTIEK 691
           GD+  +  + + +    N SI  W A+L     H    +V+K + K
Sbjct: 614 GDLSSSQDLFNGLD---NRSIITWNAILAANAHHGHGEEVLKLVSK 656


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 203/628 (32%), Positives = 340/628 (54%), Gaps = 6/628 (0%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           +K+  R+IK G   D  + +S++  Y +   L  AR+V ++M  +DV  W+  ++S    
Sbjct: 9   KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
             + E +++F+ M    +  +     SL  A   L       SIH  V +   + D  + 
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+F+ MY K   + +  + F  +      S   ++S +  +    +     +++L    E
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           PN+ T I++L +CA  G L EGK++H Q+I+ G+ P+  +L  +L+  YA+CG  +   K
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPD-SHLWNSLVNVYAKCGSANYACK 247

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V   I ER+++SW  LI+ +  +G     L +  QM   G  P+ ++  S L +C ++  
Sbjct: 248 VFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306

Query: 415 LQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           + LG Q+H  ++K  +D  D FV ++L+DMY+K  F   A  +F R+ ++ +  W  ++ 
Sbjct: 307 VDLGKQVHAQIVKNSLDGND-FVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+ Q+G   +A+  F QM    ++ +E T  +++  CS I  L+ G+ +H   I  G   
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+++ +AL DMYAKCG ++ A+ VFD +  R+ VSW+ +I  Y  HGQ   A   F+ ML
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
           D G  P+EVTF+ +L ACSH G +EEGK +FN++ +I+G+ P ++HYACMVD+L R+G  
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
                 I  M   +N  IW  +L  C++H  I+  +    +L       +  Y LLSN++
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 605

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           A +G WD+   VR++M   G+KK PG S
Sbjct: 606 AAKGMWDDVTNVRALMSTRGVKKEPGCS 633



 Score =  295 bits (754), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 173/604 (28%), Positives = 314/604 (51%), Gaps = 11/604 (1%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           L ++   ++  G+  D    + L+  Y +  SL+ +R V +     D   W   +     
Sbjct: 8   LKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANS 67

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
               +E++ L++ M   +  ++ FI+ S++ A +SLGD   GE +H  + K GF+ D +I
Sbjct: 68  PYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             + +  Y +   +++  + F  M   ++ S +++++ + D     +G ++   ++ EG 
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF 187

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           EP+  T +S+ + C     L   ++IHG V++  I  D  L NS + +Y+KCG    A +
Sbjct: 188 EPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACK 247

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F +I +R   SWTA+I+ +   G +   L  F +ML     PN+ T I++L SC+ L  
Sbjct: 248 VFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  GK VH QI++  +    D++G AL++ YA+   + + E + + + +R++ +W ++++
Sbjct: 307 VDLGKQVHAQIVKNSLDGN-DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCK 431
            YA+ G  ++A++  +QMQ  G+ P+ F++ASSLS C  + +L  G Q+H   IK     
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D FV S+L+DMY+KCG    A ++F+ +  +  V WN++ICG+ Q+G   +A+  F  M 
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
                 DEVTF+  + ACS++G +E+GK   + L   YG+   I     + D+  + G  
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545

Query: 551 QTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN----DAASLFKQMLDSGIKPNEVTFMN 605
              +   + M    NV+ W  ++    MHG +      A  LF+  L+  I  N +   N
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE--LEPEIDSNYILLSN 603

Query: 606 ILWA 609
           +  A
Sbjct: 604 MFAA 607



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 156/336 (46%), Gaps = 38/336 (11%)

Query: 1   MPLFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + RSC++L  +    ++HA ++   L  +    T L++ YA+   L  +  +F+   +
Sbjct: 295 ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK 354

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D F W V++  Y  +   E+++  + +M RE    + F   S L  CS +  L SG ++
Sbjct: 355 RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 414

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   IK G   D  + ++++  Y + GC++DA  VFD + SRD VSW++II  Y  +   
Sbjct: 415 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 474

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + LK F +M+ EG  PD VT + +  AC  +  +   +  H + L +   I   + +  
Sbjct: 475 GKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITPTIEH-- 531

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
                                      +  M+    R+G F + +ESF++  E+K   N+
Sbjct: 532 ---------------------------YACMVDILGRAGKFHE-VESFIE--EMKLTSNV 561

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +   TVLG+C   G +  G+    ++    + PE D
Sbjct: 562 LIWETVLGACKMHGNIEFGERAAMKLFE--LEPEID 595


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 214/696 (30%), Positives = 361/696 (51%), Gaps = 19/696 (2%)

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           F W + I  Y  N     ++ ++  M  E          ++L A +SLGDL  GE  H  
Sbjct: 7   FSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRT 66

Query: 121 IIKC-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + +  G   D V+ T++L  Y   G +  AR+ FD M  R+VVSWS++IA+Y       +
Sbjct: 67  VCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGD 126

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFI 238
            L++F  M  EGV+ + +T +S+ +AC  + ++   +SIH  ++   +  D   LGN+ +
Sbjct: 127 ALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIV 186

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG++  A   F ++E +   +W  MI+  +R   +++A     +M      PN I
Sbjct: 187 NMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKI 246

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           TL++V+ +CA +  +  G+ VH +I+  G G E D  +  AL+  Y +CGK+      + 
Sbjct: 247 TLVSVIDACAWMQSIVRGRIVH-EIV-AGEGLESDNTVANALVNLYGKCGKLRAARHALE 304

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            I  R+ +SW  L++ YAR G  K A+ ++ +M   G+  DSF+  + L +C  + +L L
Sbjct: 305 GIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALAL 364

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFY 475
           G +IH  + +   + D  +Q++L+DMY KCG  + A   F+R+   + V +WN+++  + 
Sbjct: 365 GEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYV 424

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV--RKD 533
                 E + +F +M L  +  D VTFL+ + AC+++  L  G+  H +++  G+  R+ 
Sbjct: 425 LRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQA 484

Query: 534 I----YIDTALTDMYAKCGDLQTAQRVFDSMSE---RNVVSWSAMIDCYGMHGQLNDAAS 586
           +     + T++ +MYAKCG L  A+  F         +VV+WSAM+  Y   G   +A  
Sbjct: 485 VASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALR 544

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLL 645
            F  M   G+KP+ V+F++ +  CSHSG V E   +F ++R   G+ P   H+AC+VDLL
Sbjct: 545 CFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLL 604

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
           SR+G I  A  ++   P  A+ S W  LL+ CR +   D+ +       +        Y+
Sbjct: 605 SRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYG--DLERARRVAARLASLRSGSAYS 662

Query: 706 LLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           LL++++     WD+    R  +   G    PG S I
Sbjct: 663 LLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWI 698



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 248/474 (52%), Gaps = 3/474 (0%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  R   SW+  IA Y  N   +  L++F +M  EGV PD V+ +++ +A   L  L   
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 216 RSIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              H  V     +  D  +  + + MY++CG +  A R F  +  R   SW+AMI+ Y +
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G    ALE FV+M     + N IT ++VL +CA +  +  GKS+H +I+  G+  +   
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           LG  ++  Y +CG++    +V   +  +N ++WN +I+  +R    KEA  LL +M   G
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           L P+  ++ S + AC  + S+  G  +H  V     + D  V ++L+++Y KCG    A 
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
              E I+ +  + W +++  + ++G+   AI +  +M    +++D  TF+  +++C  I 
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMI 572
            L  G+ +H +L   G+  D  + TAL DMY KCG+   A+R FD MS+ R+V  W+A++
Sbjct: 361 ALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALL 420

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
             Y +  Q  +   +F +M   G+ P+ VTF++IL AC+   ++  G+   + M
Sbjct: 421 AAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRM 474



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 259/509 (50%), Gaps = 15/509 (2%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
           +GL  D   +T ++  Y   GS+  +R  FD     +   W+ +I  Y       +++ L
Sbjct: 71  SGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALEL 130

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI-QTSILCTYG 141
           + +M  E    +   + SVL AC+S+  +  G+ +H RI+  G   DDVI   +I+  YG
Sbjct: 131 FVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYG 190

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           + G +D AR+VF++M +++ V+W+++IA+   +    E   +   M  +G+ P+ +T++S
Sbjct: 191 KCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVS 250

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           + +AC  + S+   R +H  V    ++ D  + N+ + +Y KCG L +A      IE R 
Sbjct: 251 VIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRD 310

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SWT +++ Y R G  ++A+    +M     + +  T + +L SC  +  L  G+ +H 
Sbjct: 311 KISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHD 370

Query: 322 QIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGM 379
           ++   G+  E D  L  AL++ Y +CG      +    + + R++  WN L++ Y  +  
Sbjct: 371 RLAESGI--ELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQ 428

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD------- 432
            KE L +  +M   G+ PD+ +  S L AC ++ +L LG   H  +++    D       
Sbjct: 429 GKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASA 488

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLF---ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           + + +S+I+MY+KCG    A   F    R +   VV W++M+  + Q G S EA+  F+ 
Sbjct: 489 DLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYS 548

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           M    ++ D V+F++AI  CS+ G + + 
Sbjct: 549 MQQEGVKPDSVSFVSAIAGCSHSGLVREA 577



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 223/418 (53%), Gaps = 4/418 (0%)

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           R   SW   I+ Y R+G   +ALE F  M      P+ ++ I +L + A LG L +G+  
Sbjct: 4   RSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFF 63

Query: 320 HCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           H  +    G+G +   +  A++  Y  CG +S   +   A+  RN++SW+ +I+ YA++G
Sbjct: 64  HRTVCEASGLGSDV-VVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRG 122

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQ 436
              +ALEL V+M   G+  ++ +  S L AC ++ ++ LG  IH  ++   +   D  + 
Sbjct: 123 HPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILG 182

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           +++++MY KCG  +LA  +FER++ K+ V WN+MI    ++    EA  L  +M L+ L 
Sbjct: 183 NTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLR 242

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            +++T ++ I AC+ +  + +G+ VH  +   G+  D  +  AL ++Y KCG L+ A+  
Sbjct: 243 PNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHA 302

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
            + +  R+ +SW+ ++  Y  HG    A ++ K+M   G+K +  TF+N+L +C    ++
Sbjct: 303 LEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAAL 362

Query: 617 EEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
             G+   + +   G+E D      +VD+  + G+ + A +    M    + ++W ALL
Sbjct: 363 ALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALL 420



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 184/365 (50%), Gaps = 15/365 (4%)

Query: 6   SCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C  ++ + R   +H  +   GL  D   +  L+  Y + G LR++R   +  +  D   
Sbjct: 254 ACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKIS 313

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L+  Y  +   + +I +  +M  E   + +F + ++L +C ++  L  GE++H R+ 
Sbjct: 314 WTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLA 373

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGL 181
           + G + D V+QT+++  YG+ G  D AR+ FD+M+  RDV  W++++A+Y       E L
Sbjct: 374 ESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETL 433

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL------RRKIKIDGPLGN 235
            +F  M  +GV PD VT LS+ +AC  L +L   R  H  +L      R+ +     L  
Sbjct: 434 GIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTT 493

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTT---SWTAMISCYNRSGWFQKALESFVKMLEVK 292
           S I MY+KCG L  A+  F K  +   +   +W+AM++ Y++ G  ++AL  F  M +  
Sbjct: 494 SVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEG 553

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSE 351
            +P+ ++ ++ +  C+  G +RE  +    +    G+ P   +    L++  +  G + E
Sbjct: 554 VKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFA-CLVDLLSRAGWIRE 612

Query: 352 CEKVI 356
            E ++
Sbjct: 613 AEALM 617


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 213/649 (32%), Positives = 336/649 (51%), Gaps = 35/649 (5%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV---IQTSILCTYGEFGCLDDARKVFDKM 156
           S+LR  ++   L   + +HG  I  G         + + +  +Y   GC+  ARK+FD +
Sbjct: 84  SLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL 143

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPA 215
           +   +  W++II  Y D     + L++F SM+  G   PD  T   + +AC  +  L   
Sbjct: 144 SDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVG 203

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             IHG  L      +  + NS + MY  CG +  A + F  + KR   SW  MIS + ++
Sbjct: 204 VLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQN 263

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  ++AL  F  M++ + EP+  T+++ L SC  L  L  G  VH ++++K    E   +
Sbjct: 264 GRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVH-KLVQKNHLQEKIEV 322

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++ Y+ CG + E   V     E+++++W  +I+ Y   G +K AL L   MQ  G+
Sbjct: 323 RNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGV 382

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           +P++ ++AS LSAC                           +SL  MY+KC   + ++ +
Sbjct: 383 VPNAVTLASLLSAC---------------------------ASLCYMYAKCNAVSYSFQV 415

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F +  +K  V WN+++ G   N  + EA+ LF  M +  +E +  TF + I A + +  L
Sbjct: 416 FAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADL 475

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAMID 573
           ++   +H  L+  G    I + T L DMY+KCG L  A ++FD +   E++++ WS +I 
Sbjct: 476 KQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIA 535

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            YGMHG    A  LF QM+ SG++PNE+TF ++L ACSH G V++G   F  M   +   
Sbjct: 536 GYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSS 595

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P   HY C+VDLL R+G ++ A+ +I SMPF  N SIWGALL  C IH+ +++ +   + 
Sbjct: 596 PLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAER 655

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L        G Y LL+NIYA  G W +   VR IM   GL+K P  S++
Sbjct: 656 LFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSV 704



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 175/666 (26%), Positives = 318/666 (47%), Gaps = 72/666 (10%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPP---ASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + +  +L K   LH H + +GL + P      + L  SYA  G +  +R +FD   +P  
Sbjct: 89  YAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSL 148

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           F+W  +IK Y+   F  +++ ++  MI   +     + +P V++ACS +  L  G  +HG
Sbjct: 149 FLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHG 208

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R +  GF  +  +Q S+L  Y   G +  AR+VF+ M  R VVSW+++I+ +F N    E
Sbjct: 209 RALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEE 268

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F+SM+   VEPD  T++S   +CG L  L     +H  V +  ++    + N+ + 
Sbjct: 269 ALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVD 328

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYS+CG +  A   F + +++   +WT+MI+ Y  +G  + AL     M      PN +T
Sbjct: 329 MYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L ++L +CA L ++                             YA+C  +S   +V    
Sbjct: 389 LASLLSACASLCYM-----------------------------YAKCNAVSYSFQVFAKT 419

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++  + WN L+S      +++EA+ L   M    +  +  +  S + A   +  L+  +
Sbjct: 420 SKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVM 479

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQ 476
            +H ++++     +  V + LIDMYSKCG  + A+ +F+ I  ++K +++W+ +I G+  
Sbjct: 480 NLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGM 539

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G+   A+ LF+QM  + ++ +E+TF + + ACS+ G ++ G      L  Y +    Y 
Sbjct: 540 HGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGL----TLFKYMIEN--YP 593

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            + L + Y                        + ++D  G  G+L++A  L K M     
Sbjct: 594 SSPLPNHY------------------------TCVVDLLGRAGRLDEAYDLIKSM---PF 626

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAF 655
           + N   +  +L AC    +VE G+    A R+F +EP+   +Y  + ++ +  G  + A 
Sbjct: 627 QQNHSIWGALLGACLIHQNVELGE--VAAERLFELEPESTGNYILLANIYAAVGRWKDAE 684

Query: 656 KMIHSM 661
            + H M
Sbjct: 685 NVRHIM 690



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 12/243 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KEP 58
           +P +    +L+++  LH++L+ +G        T LI+ Y++ GSL  +  +FD    KE 
Sbjct: 466 IPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEK 525

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D  +W+VLI  Y  +   E ++LL+++M+      +   + SVL ACS  G +  G  + 
Sbjct: 526 DIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLF 585

Query: 119 GRIIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYFDNA 175
             +I+  +    +    T ++   G  G LD+A  +   M  +   S W +++ +   + 
Sbjct: 586 KYMIE-NYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQ 644

Query: 176 DVSEGLKMFHSMVREGVEP----DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
           +V  G      +    +EP    +++ + ++  A G        R I   +  RK     
Sbjct: 645 NVELGEVAAERLFE--LEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQS 702

Query: 232 PLG 234
            +G
Sbjct: 703 SVG 705


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 208/734 (28%), Positives = 373/734 (50%), Gaps = 4/734 (0%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR+   LHA LL +G   D      L+  Y + G L  +R VFD     D   W  ++  
Sbjct: 76  LRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSA 135

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
                    ++ L+ +M  E    + F   + L+AC+   DLG   +VH + +K     D
Sbjct: 136 ITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFD 195

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             + +S++  Y   G +D A +       R  VSW++++  Y  + D ++ + +F  +V 
Sbjct: 196 PYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVE 255

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            G E    T+ ++ + C EL   +  +++HG V++R ++ D  L N  I MYSKC     
Sbjct: 256 SGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAED 315

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F +I++      + MISC++R     +A + F++M ++  +PN  T + +    + 
Sbjct: 316 AYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASR 375

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
            G +   +S+H  I++ G       +  A++  Y + G + +       +   +I SWN 
Sbjct: 376 TGDVNLCRSIHAHIVKSGFS-RTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNT 434

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           L+S +      +  L +  ++   G++ + ++    L  C ++  L+ G Q+H  V+K  
Sbjct: 435 LLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSG 494

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            + ++ V   L+DMY + G    A L+F+R++++ V  W  ++  + +     +AI  F 
Sbjct: 495 FQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFR 554

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            M       ++ T  T++  CS++  L  G  +H   I  G    + + +AL DMY KCG
Sbjct: 555 SMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCG 613

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           +L  A+ +FD     ++V W+ +I  Y  HG    A   F++M+D G  P+E+TF+ +L 
Sbjct: 614 NLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLS 673

Query: 609 ACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSH+G ++EG+ YF  +  ++G+ P L+HYACMVD+L+++G +  A  +I+ MP   + 
Sbjct: 674 ACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDA 733

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           S+W  +L  CR+H  I++ +   ++L  +  +D     LLSNIYA+   W++  K+RS++
Sbjct: 734 SLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSML 793

Query: 728 EVTGLKKVPGYSTI 741
              G+KK PG S I
Sbjct: 794 VDRGVKKEPGCSWI 807



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 259/515 (50%), Gaps = 2/515 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y + L+ C++   L  G+ +H R+++ G   D  +  S+L  Y + G L DAR VFD M 
Sbjct: 63  YAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMP 122

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDVV+W++++++     D    L++F  M  EGV P+   + +  +AC     L     
Sbjct: 123 HRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQ 182

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H   ++ +   D  + +S +  Y  CG++  AER  +    R   SW A+++ Y R G 
Sbjct: 183 VHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGD 242

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           + K +  F K++E  +E +  TL TVL  C  LG  + G++VH  +I++G+  +   L  
Sbjct: 243 YAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDR-VLNN 301

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            LIE Y++C    +  +V   I E +++  +++IS + R  M+ EA ++ +QM   G+ P
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKP 361

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           + ++           G + L   IH H++K    + + V  +++ MY K G    A L F
Sbjct: 362 NQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAF 421

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           + +Q   +  WN+++ GFY   N    + +F ++    +  ++ T++  ++ C+++  L 
Sbjct: 422 DLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLR 481

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            G  VH  ++  G + D  +   L DMY + G    A+ VFD + ER+V SW+ ++  Y 
Sbjct: 482 FGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYA 541

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
              +   A   F+ ML    +PN+ T    L  CS
Sbjct: 542 KTDEGEKAIECFRSMLRENKRPNDATLATSLSVCS 576



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%), Gaps = 4/207 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R CT+L  L    ++HA +L +G   D   S  L++ Y + G   ++RLVFD  KE D
Sbjct: 470 ILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERD 529

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W V++  Y   +  E++I  +  M+RE    ++    + L  CS L  LGSG ++H 
Sbjct: 530 VFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHS 589

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK G++   V+ ++++  Y + G L DA  +FD+  + D+V W++II  Y  +    +
Sbjct: 590 YTIKSGWNS-SVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYK 648

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            L+ F  M+ EG  PD +T + +  AC
Sbjct: 649 ALEAFQEMIDEGNVPDEITFVGVLSAC 675



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           ++  A+Q C+    L +GK +H +L+  G R D ++  +L +MY KCG L  A+ VFD M
Sbjct: 62  SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE-EG 619
             R+VV+W+AM+      G    A  LF +M + G+ PN       L AC+    +    
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181

Query: 620 KFYFNAMRIFGV-EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           + +  A+++ G+ +P +   + +V+     G+++ A + +   P  ++ S W ALLN
Sbjct: 182 QVHAQAVKLEGLFDPYVS--SSLVEAYVSCGEVDVAERALLDSPVRSDVS-WNALLN 235


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 225/770 (29%), Positives = 371/770 (48%), Gaps = 85/770 (11%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA L    L  D   S   IE Y++   + S+  VFD     + F W  ++  Y     
Sbjct: 28  VHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYCKARN 87

Query: 76  FEESILLYHKMIREQAT-------------------------------ISNFIYPSVLRA 104
            + +  L+ +M +                                    S+  + +V  A
Sbjct: 88  LQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFATVFSA 147

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           C SL D   G + HG +IK G + +  +  ++LC Y + G   DA +VF  +   + V++
Sbjct: 148 CGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTF 207

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG---- 220
           ++++        + E  ++F  M+R+G+  D V++ S+   C +    R     HG    
Sbjct: 208 TTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAK--GERDVGPCHGISTN 265

Query: 221 ------HVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                 H L  K+    D  L NS + MY+K GD+ SAE+ FV + +    SW  MI+ Y
Sbjct: 266 AQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGY 325

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
                 +KA E   +M     EP+ +T I +L +C   G +R G+ +            +
Sbjct: 326 GNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQI------------F 373

Query: 333 DYLG-PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           D +  P+L                          SWN ++S Y +    +EA+EL  +MQ
Sbjct: 374 DCMPCPSLT-------------------------SWNAILSGYNQNADHREAVELFRKMQ 408

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKN 450
                PD  ++A  LS+C  +G L+ G ++H    K    D+ +V SSLI++YSKCG   
Sbjct: 409 FQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKME 468

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           L+  +F ++ +  VV WNSM+ GF  N    +A++ F +M        E +F T + +C+
Sbjct: 469 LSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCA 528

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +  L +G+  H +++  G   DI++ ++L +MY KCGD+  A+  FD M  RN V+W+ 
Sbjct: 529 KLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNE 588

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI  Y  +G  ++A  L+  M+ SG KP+++T++ +L ACSHS  V+EG   FNAM + +
Sbjct: 589 MIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKY 648

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
           GV P + HY C++D LSR+G       ++ +MP   +  +W  +L+ CRIH  + + K  
Sbjct: 649 GVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRA 708

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            +EL      ++  Y LL+N+Y+  G WD+   VR +M    ++K PGYS
Sbjct: 709 AEELYRLDPQNSASYVLLANMYSSLGKWDDAHVVRDLMSHNQVRKDPGYS 758



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 279/585 (47%), Gaps = 53/585 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R H  ++  GL  +      L+  YA+ G    +  VF    EP+   +  ++      N
Sbjct: 159 RTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTN 218

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSS----------LGDLGSGEKVHGRIIKC 124
             +E+  L+  M+R+   + +    S+L  C+           +     G+++H   +K 
Sbjct: 219 QIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKL 278

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF++D  +  S+L  Y + G +D A KVF  +    VVSW+ +IA Y +  +  +  +  
Sbjct: 279 GFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYL 338

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M  +G EPD VT +++  AC                                    K 
Sbjct: 339 QRMQSDGYEPDDVTYINMLTAC-----------------------------------VKS 363

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           GD+ +  + F  +     TSW A++S YN++   ++A+E F KM    + P+  TL  +L
Sbjct: 364 GDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVIL 423

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYD--YLGPALIEFYAECGKMSECEKVIHAIGER 362
            SCA LG+L  GK VH    + G    YD  Y+  +LI  Y++CGKM   + V   + E 
Sbjct: 424 SSCAELGFLEAGKEVHAASQKFGF---YDDVYVASSLINVYSKCGKMELSKHVFSKLPEL 480

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++ WN +++ ++   + ++AL    +M+  G  P  FS A+ +S+C  + SL  G Q H
Sbjct: 481 DVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFH 540

Query: 423 GHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
             ++K    D+ FV SSLI+MY KCG  N A   F+ +  ++ V WN MI G+ QNG+  
Sbjct: 541 AQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGH 600

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTAL 540
            A+ L++ M  +  + D++T++  + ACS+   +++G  + + ++  YGV   +   T +
Sbjct: 601 NALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCI 660

Query: 541 TDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
            D  ++ G     + + D+M  + + V W  ++    +H  L+ A
Sbjct: 661 IDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLA 705



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 153/606 (25%), Positives = 284/606 (46%), Gaps = 79/606 (13%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           SG+ VH R+ +     D  +    +  Y +   +  A  VFD +  +++ SW++I+A+Y 
Sbjct: 24  SGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYC 83

Query: 173 DNADVSEGLKMF---------------HSMVR----------------EGVEPDFVTMLS 201
              ++    ++F                +MVR                +GV P  +T  +
Sbjct: 84  KARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFAT 143

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           +  ACG L      R  HG V++  ++ +  + N+ + MY+KCG    A R F  I +  
Sbjct: 144 VFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPN 203

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA----------GLG 311
             ++T M+    ++   ++A E F  ML      + ++L ++LG CA          G+ 
Sbjct: 204 EVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGIS 263

Query: 312 WLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
              +GK +H   ++  +G E D +L  +L++ YA+ G M   EKV   +   +++SWN++
Sbjct: 264 TNAQGKQMHTLSVK--LGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIM 321

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           I+ Y  +  S++A E L +MQ+ G  PD  +  + L+AC   G ++ G QI         
Sbjct: 322 IAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQI--------- 372

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
                                    F+ +   S+  WN+++ G+ QN +  EA+ LF +M
Sbjct: 373 -------------------------FDCMPCPSLTSWNAILSGYNQNADHREAVELFRKM 407

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
              C   D  T    + +C+ +G LE GK VH     +G   D+Y+ ++L ++Y+KCG +
Sbjct: 408 QFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKM 467

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           + ++ VF  + E +VV W++M+  + ++    DA S FK+M   G  P+E +F  ++ +C
Sbjct: 468 ELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSC 527

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           +   S+ +G+ +   +   G   D+   + ++++  + GD+ GA      MP   N   W
Sbjct: 528 AKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMP-GRNTVTW 586

Query: 671 GALLNG 676
             +++G
Sbjct: 587 NEMIHG 592



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 170/390 (43%), Gaps = 47/390 (12%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC  L  L     +HA     G + D   ++ LI  Y++ G +  S+ VF    E D
Sbjct: 422 ILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELD 481

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  +  N+  ++++  + KM +     S F + +V+ +C+ L  L  G++ H 
Sbjct: 482 VVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHA 541

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +I+K GF  D  + +S++  Y + G ++ AR  FD M  R+ V+W+ +I  Y  N D   
Sbjct: 542 QIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHN 601

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +++ M+  G +PD +T +++  AC            H  ++   ++I       F  
Sbjct: 602 ALCLYNDMISSGEKPDDITYVAVLTACS-----------HSALVDEGLEI-------FNA 643

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           M  K G +                 +T +I C +R+G F + +E  +  +  K++   + 
Sbjct: 644 MLQKYGVVPK------------VAHYTCIIDCLSRAGRFNE-VEVILDAMPCKDDA--VV 688

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              VL SC     L   K    ++ R  + P+       L   Y+  GK  +   V    
Sbjct: 689 WEVVLSSCRIHANLSLAKRAAEELYR--LDPQNSASYVLLANMYSSLGKWDDAHVV---- 742

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQ 389
             R+++S N +  +    G S+   +++++
Sbjct: 743 --RDLMSHNQVRKD---PGYSRNDTQIILE 767



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 31/190 (16%)

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           +Q C        GK VH +L    +  D ++     ++Y+KC  + +A  VFD++  +N+
Sbjct: 13  VQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNI 72

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQM------------------------LDS------- 594
            SW+A++  Y     L  A  LF QM                        LD+       
Sbjct: 73  FSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLD 132

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           G+ P+ +TF  +  AC      + G+     +   G+E ++     ++ + ++ G    A
Sbjct: 133 GVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADA 192

Query: 655 FKMIHSMPFP 664
            ++   +P P
Sbjct: 193 LRVFRDIPEP 202


>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
 gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
          Length = 917

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 203/700 (29%), Positives = 368/700 (52%), Gaps = 13/700 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+ +L  G   D   S  ++  Y + GSL  +R VF+    P++  W  ++     +  
Sbjct: 226 IHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGC 285

Query: 76  FEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E++  + +M ++  +T     + ++L ACSS   L  GE ++  I++CG+D   ++  
Sbjct: 286 CVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGN 345

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            I+  Y   G +D+A   F  M  RD +SW++II+ +       E + +F  M+ EG+ P
Sbjct: 346 CIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITP 405

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T +S+ +    +   + A+ +   ++   +++D  L ++ I M+S+ G++  A   F
Sbjct: 406 DKFTFISIIDGTARM---QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLF 462

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             ++ R    WT++IS Y + G    AL     M       N  TL+T L +CA L  L 
Sbjct: 463 DDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALS 522

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           EGK +H   I +G       +G ALI  YA+CG + E + V H  G +N++SWN + + Y
Sbjct: 523 EGKLIHSHAIERGFAAS-PAVGNALINMYAKCGCLEEADLVFHQCG-KNLVSWNTIAAAY 580

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
            ++   +EAL+L  +MQ  GL  D  S  + L+ C +      G +IH  +++   + D 
Sbjct: 581 VQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GSKIHNILLETGMESDH 637

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++L++MY+     + A  +F R++ + +V WN+MI G  ++G S EAI +F +M L 
Sbjct: 638 IVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLE 697

Query: 494 CLEMDEVTFLTAIQA--CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            +  D+++F+T + A   S+   L++ + V   +   G   D  +  A+  M+ + G L 
Sbjct: 698 GVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLA 757

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+R F+ + ER+  SW+ ++  +  HG++  A  LF++M     +P+ +T +++L ACS
Sbjct: 758 EARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACS 817

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H G +EEG ++F +M R FG+    +HY C+VDLL+R+G ++ A +++  MP PA+  +W
Sbjct: 818 HGGLIEEGYYHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLW 877

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
             LL+ C++       K + + +          Y +LS++
Sbjct: 878 MTLLSACKVQGDEKRAKRVAERVMELDPRRPAAYVVLSSV 917



 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 191/667 (28%), Positives = 342/667 (51%), Gaps = 19/667 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+ +  +    D       I  Y + G +  +  VF +   P    W  L+  +  +  
Sbjct: 24  VHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFARDGQ 83

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F+++  ++ +M  +        + +VL  C++ GDL  G+ +HG +++ G +++ ++ TS
Sbjct: 84  FQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTS 143

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  YG+ GC++DAR+VFDK+  +DVVSW+S+I +Y  +    E L++FH M   GV P+
Sbjct: 144 LIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPN 203

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T  +   AC  + S+   + IH  VL    + D  +  + + MY KCG L  A   F 
Sbjct: 204 RITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFE 263

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLR 314
           ++    T SW A+++   + G   +AL  F +M L+    P+ +T IT+L +C+    L 
Sbjct: 264 RMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLT 323

Query: 315 EGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            G+ ++  I++ G    YD    +G  ++  Y+ CG++         + ER+ +SWN +I
Sbjct: 324 FGELLYECILQCG----YDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTII 379

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL--GLQIHGHVIKID 429
           S +A+ G   EA+ L  +M   G+ PD F+  S +     +   ++   L +   V    
Sbjct: 380 SGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSELMVESGVE--- 436

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D F+ S+LI+M+S+ G    A  LF+ ++ + +VMW S+I  + Q+G+S +A+     
Sbjct: 437 -LDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRL 495

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  L  ++ T +TA+ AC+++  L +GK +H   I  G      +  AL +MYAKCG 
Sbjct: 496 MRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGC 555

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L+ A  VF     +N+VSW+ +   Y    +  +A  LF++M   G+K ++V+F+ +L  
Sbjct: 556 LEEADLVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNG 614

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           CS   S  EG    N +   G+E D      ++++ + S  ++ A ++   M F    S 
Sbjct: 615 CS---SASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVS- 670

Query: 670 WGALLNG 676
           W A++ G
Sbjct: 671 WNAMIAG 677



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 294/566 (51%), Gaps = 10/566 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + ++L  C+    +  G  VH R+    F +DD++Q + +  YG+ GC++DA  VF  + 
Sbjct: 5   FLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLD 64

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
               VSW+S++A++  +    +  ++F  M  +G+ PD +T +++ + C     L   + 
Sbjct: 65  HPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKL 124

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HG VL   ++ +  +G S I MY KCG +  A R F K+  +   SWT+MI  Y +   
Sbjct: 125 LHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDR 184

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +ALE F +M      PN IT  T + +CA +  + +GK +H Q++  G   +   +  
Sbjct: 185 CVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDV-VVSC 243

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLM 396
           A++  Y +CG + +  +V   +   N +SWN +++   + G   EAL    +MQ   G  
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGST 303

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
           PD  +  + L+AC +  +L  G  ++  +++        V + ++ MYS CG  + A   
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAF 363

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F  + ++  + WN++I G  Q G   EA++LF +M    +  D+ TF++ I   +   ++
Sbjct: 364 FSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA---RM 420

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           ++ K +   ++  GV  D+++ +AL +M+++ G+++ A+ +FD M +R++V W+++I  Y
Sbjct: 421 QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSY 480

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM--RIFGVEP 633
             HG  +DA    + M   G+  N+ T +  L AC+   ++ EGK   +    R F   P
Sbjct: 481 VQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASP 540

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIH 659
            + +   ++++ ++ G +E A  + H
Sbjct: 541 AVGN--ALINMYAKCGCLEEADLVFH 564



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 247/469 (52%), Gaps = 6/469 (1%)

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T L+L   C +  ++   R +H  V   + + D  + N+ I MY KCG +  A   F
Sbjct: 1   DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             ++     SW ++++ + R G FQ+A + F +M      P+ IT +TVL  C   G L 
Sbjct: 61  QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLS 120

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  ++  G+      +G +LI+ Y +CG + +  +V   +  ++++SW  +I  Y
Sbjct: 121 RGKLLHGFVLEAGLERNV-MVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTY 179

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            +     EALEL  +M+  G++P+  + A+++SAC +V S+  G  IH  V++   + + 
Sbjct: 180 VQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDV 239

Query: 435 VQS-SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           V S ++++MY KCG    A  +FER+   + V WN+++    Q+G  +EA+  F +M L 
Sbjct: 240 VVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQ 299

Query: 494 CLEM-DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
                D+VTF+T + ACS+   L  G+ ++  ++  G    + +   +  MY+ CG +  
Sbjct: 300 GGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDN 359

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A   F +M ER+ +SW+ +I  +   G  ++A  LF++ML  GI P++ TF++I+     
Sbjct: 360 AAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISII---DG 416

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           +  ++E K     M   GVE D+   + ++++ SR G++  A  +   M
Sbjct: 417 TARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDM 465



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 152/276 (55%), Gaps = 2/276 (0%)

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           L  C    ++  G  +H  V   + + D+ VQ++ I MY KCG    A  +F+ +   S 
Sbjct: 9   LGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQ 68

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V WNS++  F ++G   +A  +F +M L  L  D +TF+T +  C+  G L +GK +H  
Sbjct: 69  VSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGF 128

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
           ++  G+ +++ + T+L  MY KCG ++ A+RVFD ++ ++VVSW++MI  Y  H +  +A
Sbjct: 129 VLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEA 188

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDL 644
             LF +M  SG+ PN +T+   + AC+H  S+ +GK   + +   G E D+     +V++
Sbjct: 189 LELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNM 248

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
             + G +E A ++   MP P N   W A++  C  H
Sbjct: 249 YGKCGSLEDAREVFERMPHP-NTVSWNAIVAACTQH 283



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 208/412 (50%), Gaps = 15/412 (3%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
             +C +L  L+    +H+H +  G    P     LI  YA+ G L  + LVF    + + 
Sbjct: 512 LNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCGK-NL 570

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +   Y+  + + E++ L+ +M  E        + +VL  CSS  +   G K+H  
Sbjct: 571 VSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GSKIHNI 627

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ G + D ++ T++L  Y     LD+A ++F +M  RD+VSW+++IA   ++    E 
Sbjct: 628 LLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREA 687

Query: 181 LKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           ++MF  M  EGV PD   FVT+L+ A +     SL+ AR +   +  +  + D  +GN+ 
Sbjct: 688 IQMFQRMQLEGVAPDKISFVTVLN-AFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAI 746

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + M+ + G L  A R F +I +R   SW  +++ + + G  ++AL+ F +M +    P+ 
Sbjct: 747 VSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDS 806

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           ITL++VL +C+  G + EG      + R+ G+    ++ G  +++  A  G++ + E+++
Sbjct: 807 ITLVSVLSACSHGGLIEEGYYHFTSMGREFGIAGSQEHYG-CVVDLLARAGRLDQAEELL 865

Query: 357 HAIG-ERNILSWNMLISEYARKGMSKEALELLVQ-MQTWGLMPDSFSVASSL 406
             +    + + W  L+S    +G  K A  +  + M+     P ++ V SS+
Sbjct: 866 RKMPVPASYVLWMTLLSACKVQGDEKRAKRVAERVMELDPRRPAAYVVLSSV 917



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 2/208 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + +   C++  + +++H  LL TG+  D   ST L+  Y    SL  +  +F   +  D 
Sbjct: 609 VTVLNGCSSASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDI 668

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRA--CSSLGDLGSGEKVH 118
             W  +I     +    E+I ++ +M  E        + +VL A   SS   L     V 
Sbjct: 669 VSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVE 728

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I   G++ D ++  +I+  +G  G L +AR+ F+++  RD  SW+ I+ ++  + +V 
Sbjct: 729 KLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVE 788

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEAC 206
           + LK+F  M +E   PD +T++S+  AC
Sbjct: 789 QALKLFRRMQQESSRPDSITLVSVLSAC 816


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 199/568 (35%), Positives = 323/568 (56%), Gaps = 5/568 (0%)

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           +SE + +  + ++ G+  D    + + + C +   L  A+ +H  +++ +++ +  + N+
Sbjct: 9   LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + +Y +CG L  A   F  + K+   SW AMI+ Y      + A+  F +M     +PN
Sbjct: 69  LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKV 355
             T + +L +CA L  L+ GK VH   IR G G E D  +G AL+  Y +CG ++E  ++
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHA-CIRHG-GLESDVRVGTALLRMYGKCGSINEARRI 186

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +   +I+SW ++I  YA+ G  KEA  L++QM+  G  P++ +  S L+AC + G+L
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           +   ++H H +    + D  V ++L+ MY+K G  + A ++F+R++ + VV WN MI  F
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF 306

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            ++G   EA +LF QM     + D + FL+ + AC++ G LE  K +H   +  G+  D+
Sbjct: 307 AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDV 366

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            + TAL  MY+K G +  A+ VFD M  RNVVSW+AMI     HG   DA  +F++M   
Sbjct: 367 RVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAH 426

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
           G+KP+ VTF+ +L ACSH+G V+EG+  + AM +++G+EPD+ H  CMVDLL R+G +  
Sbjct: 427 GVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLME 486

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A   I +M    + + WGALL  CR +  +++ + + KE       +   Y LLSNIYAE
Sbjct: 487 AKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAE 546

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            G WD    VR++M   G++K PG S I
Sbjct: 547 AGKWDMVSWVRTMMRERGIRKEPGRSWI 574



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 290/535 (54%), Gaps = 7/535 (1%)

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
           N   E+I++    ++      +F+Y  VL+ C    DL + ++VH  IIK   +++  + 
Sbjct: 7   NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            ++L  Y E G L +AR VFD +  +   SW+++IA Y ++    + +++F  M  EGV+
Sbjct: 67  NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T + + +AC  L +L+  + +H  +    ++ D  +G + + MY KCG +  A R 
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +      SWT MI  Y +SG  ++A    ++M +   +PN IT +++L +CA  G L
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246

Query: 314 REGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  K VH   +  G+  E D  +G AL++ YA+ G + +   V   +  R+++SWN++I 
Sbjct: 247 KWVKRVHRHALDAGL--ELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            +A  G   EA +L +QMQT G  PD+    S L+AC + G+L+   +IH H +    + 
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V ++L+ MYSK G  + A ++F+R++ ++VV WN+MI G  Q+G   +A+ +F +M 
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMT 424

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
            + ++ D VTF+  + ACS+ G +++G+  +  +   YG+  D+     + D+  + G L
Sbjct: 425 AHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRL 484

Query: 551 QTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
             A+   D+M+ + +  +W A++     +G +     + K+ L    K N  T++
Sbjct: 485 MEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPK-NAATYV 538



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 266/558 (47%), Gaps = 36/558 (6%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L    ++H  ++ + +  +      L+  Y E G L+ +R VFD   +     W  +I 
Sbjct: 43  DLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIA 102

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y+ +   E+++ L+ +M  E    +   Y  +L+AC+SL  L  G++VH  I   G + 
Sbjct: 103 GYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLES 162

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  + T++L  YG+ G +++AR++FD + + D++SW+ +I +Y  + +  E  ++   M 
Sbjct: 163 DVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQME 222

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           +EG +P+ +T +S+  AC    +L+  + +H H L   +++D  +G + + MY+K G + 
Sbjct: 223 QEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSID 282

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F +++ R   SW  MI  +   G   +A + F++M     +P+ I  +++L +CA
Sbjct: 283 DARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACA 342

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
             G L   K +H   +  G+  E D  +G AL+  Y++ G + +   V   +  RN++SW
Sbjct: 343 SAGALEWVKKIHRHALDSGL--EVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSW 400

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +IS  A+ G+ ++ALE+  +M   G+ PD  +  + LSAC + G +  G         
Sbjct: 401 NAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEG--------- 451

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
                   +S  + M    G             +  V   N M+    + G  +EA    
Sbjct: 452 --------RSQYLAMTQVYGI------------EPDVSHCNCMVDLLGRAGRLMEAKLFI 491

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M    ++ DE T+   + +C   G +E G+ V  + +     K+      L+++YA+ 
Sbjct: 492 DNM---AVDPDEATWGALLGSCRTYGNVELGELVAKERLKLD-PKNAATYVLLSNIYAEA 547

Query: 548 GDLQTAQRVFDSMSERNV 565
           G       V   M ER +
Sbjct: 548 GKWDMVSWVRTMMRERGI 565



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 213/450 (47%), Gaps = 37/450 (8%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M + ++C +L  L     +HA +   GL  D    T L+  Y + GS+  +R +FD    
Sbjct: 133 MIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMN 192

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W V+I  Y  +   +E+  L  +M +E    +   Y S+L AC+S G L   ++V
Sbjct: 193 HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRV 252

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +  G + D  + T+++  Y + G +DDAR VFD+M  RDVVSW+ +I ++ ++   
Sbjct: 253 HRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRG 312

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E   +F  M  EG +PD +  LS+  AC    +L   + IH H L   +++D  +G + 
Sbjct: 313 HEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTAL 372

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MYSK G +  A   F +++ R   SW AMIS   + G  Q ALE F +M     +P+ 
Sbjct: 373 VHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDR 432

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T + VL +C+  G + EG+S               YL  A+ + Y     +S C     
Sbjct: 433 VTFVAVLSACSHAGLVDEGRS--------------QYL--AMTQVYGIEPDVSHC----- 471

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                     N ++    R G   EA   +  M    + PD  +  + L +C   G+++L
Sbjct: 472 ----------NCMVDLLGRAGRLMEAKLFIDNM---AVDPDEATWGALLGSCRTYGNVEL 518

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
           G  +    +K+D K+      L ++Y++ G
Sbjct: 519 GELVAKERLKLDPKNAATYVLLSNIYAEAG 548


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 214/712 (30%), Positives = 367/712 (51%), Gaps = 16/712 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +++  A+ G LR +  VF       +  W   +   + N     ++ ++  M+      +
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           +F Y   L AC++  +L  G  VHG +++   + D  + TS++  Y + G +  A + F 
Sbjct: 61  SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M  R+VVSW++ IA +  + +    + +   MVR GV  +  T  S+  AC ++  +R 
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS----WTAMIS 270
           A  IHG VL+ ++ +D  +  + I  Y+  G +  +E+ F   E+  T S    W+A IS
Sbjct: 181 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAGTVSNRSIWSAFIS 237

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
             +      ++++   +M      PN     +V  S   + +   G  +H   I++G   
Sbjct: 238 GVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF---GGQLHSSAIKEGF-I 292

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               +G AL   Y+ C  + +  KV   + ER+ +SW  +++ +A  G S EA      M
Sbjct: 293 HGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNM 352

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKN 450
              G  PD  S+ + LSAC     L  G ++HGH +++  +  F+    I MYSKC    
Sbjct: 353 ILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFINDCFISMYSKCQGVQ 412

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F+   +K  VMW+SMI G+  NG   EAI+LF  M    + +D     + +  C+
Sbjct: 413 TARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 472

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           +I +    K +H   I  G+  D  + ++L  +Y++ G++  +++VFD +S  ++V+W+ 
Sbjct: 473 DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTT 532

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-F 629
           +ID Y  HG   +A ++F  M+  G++P+ V  +++L ACS +G VE+G  YFN+MR  +
Sbjct: 533 IIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAY 592

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
           GVEP+LQHY CMVDLL RSG +  A   + SMP   +  +W  LL  CR+H    + + +
Sbjct: 593 GVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRFV 652

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           E ++   G  D+G +  LSNI A  G+W+E  ++R  M+  G+ K PG+S +
Sbjct: 653 ENKIR-EGNYDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 701



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/630 (23%), Positives = 299/630 (47%), Gaps = 28/630 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L     YD    T L+  YA+ G + ++   F      +   W   I  ++ ++ 
Sbjct: 83  VHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDE 142

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++LL  +M+R    I+ +   S+L AC+ +  +    ++HG ++K     D V++ +
Sbjct: 143 PVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEA 202

Query: 136 ILCTYGEFGCLDDARKVFDK---MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           ++ TY  FG ++ + KVF++   +++R +  WS+ I S   N  +   +++   M  +G+
Sbjct: 203 LISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFI-SGVSNHSLLRSVQLLRRMFHQGL 259

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+     S+  +     S+     +H   ++        +G++   MYS+C ++  + +
Sbjct: 260 RPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYK 316

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++++R   SWTAM++ +   G   +A  +F  M+    +P+ ++L  +L +C     
Sbjct: 317 VFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPEC 376

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +GK VH   +R  +  E  ++    I  Y++C  +    ++  A   ++ + W+ +IS
Sbjct: 377 LLKGKEVHGHTLR--VYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMIS 434

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            YA  G  +EA+ L   M    +  DS+  +S LS C ++        +HG+ IK     
Sbjct: 435 GYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILS 494

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D+ V SSL+ +YS+ G  + +  +F+ I    +V W ++I G+ Q+G+S  A+ +F  M 
Sbjct: 495 DQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMV 554

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
              +  D V  ++ + ACS  G +E+G  + +    +YGV  ++     + D+  + G L
Sbjct: 555 QLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRL 614

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE------VTF 603
             A+   DSM  + +++ WS ++    +H       ++  + +++ I+          T 
Sbjct: 615 AEAKYFVDSMPMKPDLMVWSTLLAACRVHDD-----TVLGRFVENKIREGNYDSGSFATL 669

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            NIL   ++SG  EE       M+    EP
Sbjct: 670 SNIL---ANSGDWEEVARIRKTMKGVNKEP 696



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 199/412 (48%), Gaps = 7/412 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVLIK 68
           +R+ +++H  +L T ++ D      LI +Y   G +  S  VF+      +  +W+  I 
Sbjct: 178 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFIS 237

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             + N+    S+ L  +M  +    ++  Y SV    SS+  +  G ++H   IK GF  
Sbjct: 238 G-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKEGFIH 293

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             ++ +++   Y     + D+ KVF++M  RD VSW++++A +  +    E    F +M+
Sbjct: 294 GILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMI 353

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            +G +PD V++ ++  AC     L   + +HGH LR   +    + + FI MYSKC  + 
Sbjct: 354 LDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETT-FINDCFISMYSKCQGVQ 412

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A R F    ++    W++MIS Y  +G  ++A+  F  M+      +     ++L  CA
Sbjct: 413 TARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 472

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +      K +H   I+ G+  +   +  +L++ Y+  G M +  KV   I   ++++W 
Sbjct: 473 DIARPFYCKPLHGYAIKAGILSDQS-VSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWT 531

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +I  YA+ G S+ AL +   M   G+ PD+  + S LSAC   G ++ G  
Sbjct: 532 TIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFN 583



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +F S  ++    +LH+  +  G  +     + L   Y+   +++ S  VF+  +E D   
Sbjct: 269 VFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS 328

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  +  +    E+ L +  MI +     +    ++L AC+    L  G++VHG  +
Sbjct: 329 WTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTL 388

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           +  + +   I    +  Y +   +  AR++FD    +D V WSS+I+ Y  N    E + 
Sbjct: 389 RV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAIS 447

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  MV   +  D     S+   C ++      + +HG+ ++  I  D  + +S + +YS
Sbjct: 448 LFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYS 507

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           + G++  + + F +I      +WT +I  Y + G  Q AL  F  M+++   P+ + L++
Sbjct: 508 RSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVS 567

Query: 303 VLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           VL +C+  G + +G    +      G+ PE  +    +++     G+++E +  + ++  
Sbjct: 568 VLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHY-CCMVDLLGRSGRLAEAKYFVDSMPM 626

Query: 362 R-NILSWNMLIS 372
           + +++ W+ L++
Sbjct: 627 KPDLMVWSTLLA 638


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 215/650 (33%), Positives = 356/650 (54%), Gaps = 12/650 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD--DARKVFDKMT 157
           S+LR C++   L   + VH RI+  G   D V+  S++  Y  F C D   AR VF+ + 
Sbjct: 8   SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVY--FACKDHCSARLVFENID 65

Query: 158 SR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPA 215
            R DV  W+S+++ Y  N+   + LK+F  ++   +  PD  T  ++ +A G L      
Sbjct: 66  IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLG 125

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R IH  V++     D  + +S + MY+K      + + F ++ +R   SW  +IS + + 
Sbjct: 126 RMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQR 185

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  +KALE F +M     EPN +++   + +C+ L  L  GK +H + ++K    + +Y+
Sbjct: 186 GDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELD-EYV 244

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++ Y  C  +    +V   +  +++++WN +I  Y  +G SK  +ELL +M   G 
Sbjct: 245 NSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGT 304

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAY 453
            P   ++ S L AC    +L  G  +HG+VI+  +D  D ++  SLID+Y KCG   LA 
Sbjct: 305 RPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDA-DIYINCSLIDLYFKCGEVKLAE 363

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F + Q+  V  WN MI G+   GN  +A++++ QM    ++ D VTF + +  CS + 
Sbjct: 364 TVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLA 423

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LEKGK +H  +    +  D  + +AL DMY+KCG+++ A R+F+S+ +++VVSW+ MI 
Sbjct: 424 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMIS 483

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
            YG HGQ  +A   F +M   G+KP+ VTF+ +L AC H+G ++EG  YF+ MR  +G+E
Sbjct: 484 AYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIE 543

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA-NGSIWGALLNGCRIHKRIDVMKTIEK 691
             ++ Y+C++D+L R+G +  A+ ++   P    N  +   L   C +H+   +  TI K
Sbjct: 544 ASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAK 603

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            L     +D   YT+L N+YA   +WD   +VR  M+  G++K PG S I
Sbjct: 604 LLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWI 653



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 169/569 (29%), Positives = 291/569 (51%), Gaps = 8/569 (1%)

Query: 1   MPLFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK- 56
           + L R CTN   LR+   +H  +L  GL  D      LI  Y       S+RLVF+    
Sbjct: 7   LSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDI 66

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGE 115
             D ++W  L+  Y  N+ F +++ ++ +++     + + F YP+V++A  +LG    G 
Sbjct: 67  RSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGR 126

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H  ++K G   D V+ +S++  Y +F   +D+ +VFD+M  RDV SW+++I+S++   
Sbjct: 127 MIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRG 186

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D  + L++F  M R   EP+ V++     AC  L  L   + IH   L+++ ++D  + +
Sbjct: 187 DAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNS 246

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY +C  L  A   F ++ ++   +W +MI  Y   G  +  +E   +M+     P
Sbjct: 247 ALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRP 306

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +  TL ++L +C+    L  GK VH  +IR  +  +  Y+  +LI+ Y +CG++   E V
Sbjct: 307 SQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADI-YINCSLIDLYFKCGEVKLAETV 365

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
                +  + SWN++IS Y   G   +A+++  QM + G+ PD  +  S LS C  + +L
Sbjct: 366 FLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAAL 425

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G QIH  + +   + DE + S+L+DMYSKCG    A  +F  I +K VV W  MI  +
Sbjct: 426 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAY 485

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKD 533
             +G   EA+  F +M    ++ D VTFL  + AC + G +++G K+       YG+   
Sbjct: 486 GSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEAS 545

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           I   + L D+  + G L  A  +     E
Sbjct: 546 IEQYSCLIDILGRAGRLLEAYGILQQKPE 574



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 255/467 (54%), Gaps = 4/467 (0%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           +LSL   C    SLR A+ +H  +L   ++ D  L  S I +Y  C D  SA   F  I+
Sbjct: 6   LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65

Query: 259 KRCTTS-WTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREG 316
            R     W +++S Y+++  F   L+ F ++L      P+  T   V+ +   LG    G
Sbjct: 66  IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLG 125

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           + +H  +++ G   +   +  +L+  YA+     +  +V   + ER++ SWN +IS + +
Sbjct: 126 RMIHTVVVKSGHVCDV-VVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQ 184

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFV 435
           +G +++ALEL  +M+     P+S S+  ++SAC  +  L+ G +IH   +K + + DE+V
Sbjct: 185 RGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYV 244

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            S+L+DMY +C F  +A  +F+++++KS+V WNSMI G+   G+S   + L ++M +   
Sbjct: 245 NSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGT 304

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
              + T  + + ACS    L  GK+VH  +I   V  DIYI+ +L D+Y KCG+++ A+ 
Sbjct: 305 RPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAET 364

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VF    +  V SW+ MI  Y   G    A  ++ QM+  G++P+ VTF ++L  CS   +
Sbjct: 365 VFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAA 424

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           +E+GK    ++    +E D    + ++D+ S+ G+++ A ++ +S+P
Sbjct: 425 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIP 471



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           M+    L+ ++ C+N   L + K VH ++++ G+R D+ +  +L ++Y  C D  +A+ V
Sbjct: 1   MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV 60

Query: 557 FDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI-KPNEVTFMNILWACSHSG 614
           F+++  R +V  W++++  Y  +   +D   +FK++L+  I  P+  T+ N++ A    G
Sbjct: 61  FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG 120

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
               G+     +   G   D+   + +V + ++    E + ++   MP   + + W  ++
Sbjct: 121 REFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMP-ERDVASWNTVI 179

Query: 675 NGCRIHKRIDVMKTIE 690
           +    ++R D  K +E
Sbjct: 180 SS--FYQRGDAEKALE 193


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 230/749 (30%), Positives = 375/749 (50%), Gaps = 40/749 (5%)

Query: 2    PLFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
            P+F+ C    +      LH + +  GL +D   +  L+  YA+ G +R +R++FD     
Sbjct: 732  PVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR 791

Query: 59   DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
            D  +W V++K Y+      E++LL+ +  R        + P  +  C+            
Sbjct: 792  DVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG------LRPDDVTLCTL----------- 834

Query: 119  GRIIKCGFDKDDVI--QTSILCTYGEFGCLDDARKVF---DKMTSRDVVSWSSIIASYFD 173
             R++K    K +V+  Q   L  YG         K+F   D     DV++W+  ++ +  
Sbjct: 835  ARVVKS---KQNVLEWQLKQLKAYGT--------KLFMYDDDDDGSDVIAWNKTLSWFLQ 883

Query: 174  NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
              +  E +  F  M+   V  D +T + +      L  L   + IHG V+R  +     +
Sbjct: 884  RGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSV 943

Query: 234  GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            GN  I MY K G +  A   F ++ +    SW  MIS    SG  + ++  FV +L    
Sbjct: 944  GNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGL 1003

Query: 294  EPNLITLITVLGSCAGLGW-LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             P+  T+ +VL +C+ LG        +H   ++ G+  +  ++   LI+ Y++ GKM E 
Sbjct: 1004 LPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLD-SFVSTTLIDVYSKSGKMEEA 1062

Query: 353  EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            E +       ++ SWN ++  Y   G   +AL L + MQ  G   +  ++A++  A G +
Sbjct: 1063 EFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGL 1122

Query: 413  GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
              L+ G QI   V+K     D FV S ++DMY KCG    A  +F  I     V W +MI
Sbjct: 1123 VGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMI 1182

Query: 472  CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
             G  +NG    A+  +H M L+ ++ DE TF T ++ACS +  LE+G+ +H   +     
Sbjct: 1183 SGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCA 1242

Query: 532  KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
             D ++ T+L DMYAKCG+++ A+ +F   +   + SW+AMI     HG   +A   F++M
Sbjct: 1243 FDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEM 1302

Query: 592  LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGD 650
               G+ P+ VTF+ +L ACSHSG V E    F +M +I+G+EP+++HY+C+VD LSR+G 
Sbjct: 1303 KSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGR 1362

Query: 651  IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
            I  A K+I SMPF A+ S++  LLN CR+    +  K + ++L     +D+  Y LLSN+
Sbjct: 1363 IREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNV 1422

Query: 711  YAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            YA    W+     R++M    +KK PG+S
Sbjct: 1423 YAAANQWENVASARNMMRKANVKKDPGFS 1451



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 185/676 (27%), Positives = 328/676 (48%), Gaps = 43/676 (6%)

Query: 15   RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP--DSFMWAVLIKCYMW 72
            R HA +L +G H D   +  LI  Y++ GSL S+R +FDT  +   D   W  ++  +  
Sbjct: 647  RAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA- 705

Query: 73   NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
             +   +   L+  + R   + +      V + C       + E +HG  +K G   D  +
Sbjct: 706  -DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFV 764

Query: 133  QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              +++  Y +FG + +AR +FD M  RDVV W+ ++ +Y D     E L +F    R G+
Sbjct: 765  AGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGL 824

Query: 193  EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS-FIVMYSKCGDLLSAE 251
             PD VT          LC+L        +VL  ++K     G   F+      G  + A 
Sbjct: 825  RPDDVT----------LCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIA- 873

Query: 252  RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
                         W   +S + + G   +A++ FV M+  +   + +T + +L   AGL 
Sbjct: 874  -------------WNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLN 920

Query: 312  WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
             L  GK +H  ++R G+  +   +G  LI  Y + G +S    V   + E +++SWN +I
Sbjct: 921  CLELGKQIHGIVVRSGLD-QVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMI 979

Query: 372  SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV-GSLQLGLQIHGHVIKIDC 430
            S  A  G+ + ++ + V +   GL+PD F+VAS L AC ++ G   L  QIH   +K   
Sbjct: 980  SGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGV 1039

Query: 431  K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
              D FV ++LID+YSK G    A  LF       +  WN+M+ G+  +G+  +A+ L+  
Sbjct: 1040 VLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYIL 1099

Query: 490  MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
            M  +    +++T   A +A   +  L++GK +   ++  G   D+++ + + DMY KCG+
Sbjct: 1100 MQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGE 1159

Query: 550  LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
            +++A+R+F+ +   + V+W+ MI     +GQ   A   +  M  S ++P+E TF  ++ A
Sbjct: 1160 MESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKA 1219

Query: 610  CSHSGSVEEGK-FYFNAMRIF-GVEPDLQHYACMVDLLSRSGDIE---GAFKMIHSMPFP 664
            CS   ++E+G+  + N +++    +P +     +VD+ ++ G+IE   G FK  ++    
Sbjct: 1220 CSLLTALEQGRQIHANTVKLNCAFDPFVM--TSLVDMYAKCGNIEDARGLFKRTNTSRIA 1277

Query: 665  ANGSIWGALLNGCRIH 680
            +    W A++ G   H
Sbjct: 1278 S----WNAMIVGLAQH 1289



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/613 (24%), Positives = 288/613 (46%), Gaps = 45/613 (7%)

Query: 82   LYHKMIREQATISN-FIYP-----------SVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
            L H  +R   + +N FI P           S+LR   +  DL  G++ H RI+  G   D
Sbjct: 601  LMHLRLRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPD 660

Query: 130  DVIQTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
              +  +++  Y + G L  ARK+FD    TSRD+V+W++I++++ D A   +G  +F  +
Sbjct: 661  RFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKA--RDGFHLFRLL 718

Query: 188  VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             R  V     T+  + + C    S   A S+HG+ ++  ++ D  +  + + +Y+K G +
Sbjct: 719  RRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRI 778

Query: 248  LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
              A   F  +  R    W  M+  Y  +G   +AL  F +       P+ +TL T+    
Sbjct: 779  REARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL---- 834

Query: 308  AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
                          ++++     + + L   L +  A   K+   +         ++++W
Sbjct: 835  -------------ARVVKS----KQNVLEWQLKQLKAYGTKLFMYDDDDDG---SDVIAW 874

Query: 368  NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
            N  +S + ++G + EA++  V M    +  D  +    LS    +  L+LG QIHG V++
Sbjct: 875  NKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVR 934

Query: 428  IDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
                D+ V   + LI+MY K G  + A  +F ++ +  +V WN+MI G   +G    ++ 
Sbjct: 935  SGL-DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVG 993

Query: 486  LFHQMYLNCLEMDEVTFLTAIQACSNI-GQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            +F  +    L  D+ T  + ++ACS++ G       +H   +  GV  D ++ T L D+Y
Sbjct: 994  MFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVY 1053

Query: 545  AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            +K G ++ A+ +F +    ++ SW+AM+  Y + G    A  L+  M +SG + N++T  
Sbjct: 1054 SKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLA 1113

Query: 605  NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            N   A      +++GK     +   G   DL   + ++D+  + G++E A ++ + +P P
Sbjct: 1114 NAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSP 1173

Query: 665  ANGSIWGALLNGC 677
             +   W  +++GC
Sbjct: 1174 -DDVAWTTMISGC 1185


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 214/720 (29%), Positives = 368/720 (51%), Gaps = 10/720 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           GL  +    T +++  A+ G LR +  VF       +  W   +   + N     ++ ++
Sbjct: 99  GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M+      ++F Y   L AC++  +L  G  VHG +++   + D  + TS++  Y + 
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC 218

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G +  A + F +M  R+VVSW++ IA +  + +    + +   MVR GV  +  T  S+ 
Sbjct: 219 GDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSIL 278

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC ++  +R A  IHG VL+ ++ +D  +  + I  Y+  G +  +E+ F +       
Sbjct: 279 LACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNR 338

Query: 264 S-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           S W+A IS  +      ++++   +M      PN     +V  S   + +   G  +H  
Sbjct: 339 SIWSAFISGVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF---GGQLHSS 394

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            I++G       +G AL   Y+ C  + +  KV   + ER+ +SW  +++ +A  G S E
Sbjct: 395 AIKEGF-IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVE 453

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           A      M   G  PD  S+ + LSAC     L  G ++HGH +++  +  F+    I M
Sbjct: 454 AFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFINDCFISM 513

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           YSKC     A  +F+    K  VMW+SMI G+  NG   EAI+LF  M    + +D    
Sbjct: 514 YSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYIC 573

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            + +  C++I +    K +H   I  G+  D  + ++L  +Y++ G++  +++VFD +S 
Sbjct: 574 SSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV 633

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
            ++V+W+ +ID Y  HG   +A ++F  M+  G++P+ V  +++L ACS +G VE+G  Y
Sbjct: 634 PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNY 693

Query: 623 FNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           FN+MR  +GVEP+LQHY CMVDLL RSG +  A   + SMP   +  +W  L+  CR+H 
Sbjct: 694 FNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHD 753

Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + + +E ++   G  D+G +  LSNI A  G+W+E  ++R  M+  G+ K PG+S +
Sbjct: 754 DTVLGRFVENKIR-EGNYDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 168/577 (29%), Positives = 276/577 (47%), Gaps = 27/577 (4%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           E+V+    K G   +  + T ++    + G L DA +VF        V W++ ++    N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            +    ++MF  MV    EP+  T      AC     L   R++HG VLRR  + D  +G
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            S + MY+KCGD+ +A R F ++  R   SWT  I+ + +      A+    +M+     
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG----PALIEFYAECGKMS 350
            N  T  ++L +CA +  +RE   +H  +++  M     YL      ALI  Y   G + 
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEM-----YLDCVVKEALISTYTNFGFIE 323

Query: 351 ECEKVIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
             EKV    G   N   W+  IS  +   + + +++LL +M   GL P+    AS  S+ 
Sbjct: 324 LSEKVFEEAGTVSNRSIWSAFISGVSNHSLLR-SVQLLRRMFHQGLRPNDKCYASVFSS- 381

Query: 410 GNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
             V S++ G Q+H   IK        V S+L  MYS+C     +Y +FE +Q++  V W 
Sbjct: 382 --VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWT 439

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLIS 527
           +M+ GF  +G+S+EA   F  M L+  + D V+    + AC+    L KGK VH H L  
Sbjct: 440 AMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV 499

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
           YG  +  +I+     MY+KC  +QTA+R+FD+   ++ V WS+MI  Y  +G   +A SL
Sbjct: 500 YG--ETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISL 557

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF----GVEPDLQHYACMVD 643
           F+ M+ + I+ +     +IL  C+         FY   +  +    G+  D    + +V 
Sbjct: 558 FQLMVAASIRIDSYICSSILSLCADIAR----PFYCKPLHGYAIKAGILSDQSVSSSLVK 613

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           + SRSG+++ + K+   +  P +   W  +++G   H
Sbjct: 614 VYSRSGNMDDSRKVFDEISVP-DLVAWTTIIDGYAQH 649



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 149/630 (23%), Positives = 299/630 (47%), Gaps = 28/630 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L     YD    T L+  YA+ G + ++   F      +   W   I  ++ ++ 
Sbjct: 192 VHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDE 251

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++LL  +M+R    I+ +   S+L AC+ +  +    ++HG ++K     D V++ +
Sbjct: 252 PVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEA 311

Query: 136 ILCTYGEFGCLDDARKVFDK---MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           ++ TY  FG ++ + KVF++   +++R +  WS+ I S   N  +   +++   M  +G+
Sbjct: 312 LISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFI-SGVSNHSLLRSVQLLRRMFHQGL 368

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+     S+  +     S+     +H   ++        +G++   MYS+C ++  + +
Sbjct: 369 RPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYK 425

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++++R   SWTAM++ +   G   +A  +F  M+    +P+ ++L  +L +C     
Sbjct: 426 VFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSEC 485

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +GK VH   +R  +  E  ++    I  Y++C  +    ++  A   ++ + W+ +IS
Sbjct: 486 LLKGKEVHGHTLR--VYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMIS 543

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            YA  G  +EA+ L   M    +  DS+  +S LS C ++        +HG+ IK     
Sbjct: 544 GYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILS 603

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D+ V SSL+ +YS+ G  + +  +F+ I    +V W ++I G+ Q+G+S  A+ +F  M 
Sbjct: 604 DQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMV 663

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
              +  D V  ++ + ACS  G +E+G  + +    +YGV  ++     + D+  + G L
Sbjct: 664 QLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRL 723

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE------VTF 603
             A+   DSM  + +++ WS ++    +H       ++  + +++ I+          T 
Sbjct: 724 AEAKYFVDSMPMKPDLMVWSTLVAACRVHDD-----TVLGRFVENKIREGNYDSGSFATL 778

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            NIL   ++SG  EE       M+    EP
Sbjct: 779 SNIL---ANSGDWEEVARIRKTMKGVNKEP 805



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 198/412 (48%), Gaps = 7/412 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVLIK 68
           +R+ +++H  +L T ++ D      LI +Y   G +  S  VF+      +  +W+  I 
Sbjct: 287 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFIS 346

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             + N+    S+ L  +M  +    ++  Y SV    SS+  +  G ++H   IK GF  
Sbjct: 347 G-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKEGFIH 402

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             ++ +++   Y     + D+ KVF++M  RD VSW++++A +  +    E    F +M+
Sbjct: 403 GILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMI 462

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            +G +PD V++ ++  AC     L   + +HGH LR   +    + + FI MYSKC  + 
Sbjct: 463 LDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTF-INDCFISMYSKCQGVQ 521

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A R F     +    W++MIS Y  +G  ++A+  F  M+      +     ++L  CA
Sbjct: 522 TARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 581

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +      K +H   I+ G+  +   +  +L++ Y+  G M +  KV   I   ++++W 
Sbjct: 582 DIARPFYCKPLHGYAIKAGILSDQS-VSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWT 640

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +I  YA+ G S+ AL +   M   G+ PD+  + S LSAC   G ++ G  
Sbjct: 641 TIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFN 692



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +F S  ++    +LH+  +  G  +     + L   Y+   +++ S  VF+  +E D   
Sbjct: 378 VFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS 437

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  +  +    E+ L +  MI +     +    ++L AC+    L  G++VHG  +
Sbjct: 438 WTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTL 497

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           +  + +   I    +  Y +   +  AR++FD    +D V WSS+I+ Y  N    E + 
Sbjct: 498 RV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAIS 556

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  MV   +  D     S+   C ++      + +HG+ ++  I  D  + +S + +YS
Sbjct: 557 LFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYS 616

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           + G++  + + F +I      +WT +I  Y + G  Q AL  F  M+++   P+ + L++
Sbjct: 617 RSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVS 676

Query: 303 VLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           VL +C+  G + +G    +      G+ PE  +    +++     G+++E +  + ++  
Sbjct: 677 VLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYC-CMVDLLGRSGRLAEAKYFVDSMPM 735

Query: 362 R-NILSWNMLIS 372
           + +++ W+ L++
Sbjct: 736 KPDLMVWSTLVA 747


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 214/720 (29%), Positives = 368/720 (51%), Gaps = 10/720 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           GL  +    T +++  A+ G LR +  VF       +  W   +   + N     ++ ++
Sbjct: 99  GLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMF 158

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M+      ++F Y   L AC++  +L  G  VHG +++   + D  + TS++  Y + 
Sbjct: 159 RDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC 218

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G +  A + F +M  R+VVSW++ IA +  + +    + +   MVR GV  +  T  S+ 
Sbjct: 219 GDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSIL 278

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC ++  +R A  IHG VL+ ++ +D  +  + I  Y+  G +  +E+ F +       
Sbjct: 279 LACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNR 338

Query: 264 S-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           S W+A IS  +      ++++   +M      PN     +V  S   + +   G  +H  
Sbjct: 339 SIWSAFISGVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF---GGQLHSS 394

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            I++G       +G AL   Y+ C  + +  KV   + ER+ +SW  +++ +A  G S E
Sbjct: 395 AIKEGF-IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVE 453

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           A      M   G  PD  S+ + LSAC     L  G ++HGH +++  +  F+    I M
Sbjct: 454 AFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFINDCFISM 513

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           YSKC     A  +F+    K  VMW+SMI G+  NG   EAI+LF  M    + +D    
Sbjct: 514 YSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYIC 573

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            + +  C++I +    K +H   I  G+  D  + ++L  +Y++ G++  +++VFD +S 
Sbjct: 574 SSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV 633

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
            ++V+W+ +ID Y  HG   +A ++F  M+  G++P+ V  +++L ACS +G VE+G  Y
Sbjct: 634 PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNY 693

Query: 623 FNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           FN+MR  +GVEP+LQHY CMVDLL RSG +  A   + SMP   +  +W  L+  CR+H 
Sbjct: 694 FNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHD 753

Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + + +E ++   G  D+G +  LSNI A  G+W+E  ++R  M+  G+ K PG+S +
Sbjct: 754 DTVLGRFVENKIR-EGNYDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 168/577 (29%), Positives = 276/577 (47%), Gaps = 27/577 (4%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           E+V+    K G   +  + T ++    + G L DA +VF        V W++ ++    N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            +    ++MF  MV    EP+  T      AC     L   R++HG VLRR  + D  +G
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            S + MY+KCGD+ +A R F ++  R   SWT  I+ + +      A+    +M+     
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG----PALIEFYAECGKMS 350
            N  T  ++L +CA +  +RE   +H  +++  M     YL      ALI  Y   G + 
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEM-----YLDCVVKEALISTYTNFGFIE 323

Query: 351 ECEKVIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
             EKV    G   N   W+  IS  +   + + +++LL +M   GL P+    AS  S+ 
Sbjct: 324 LSEKVFEEAGTVSNRSIWSAFISGVSNHSLLR-SVQLLRRMFHQGLRPNDKCYASVFSS- 381

Query: 410 GNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
             V S++ G Q+H   IK        V S+L  MYS+C     +Y +FE +Q++  V W 
Sbjct: 382 --VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWT 439

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLIS 527
           +M+ GF  +G+S+EA   F  M L+  + D V+    + AC+    L KGK VH H L  
Sbjct: 440 AMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV 499

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
           YG  +  +I+     MY+KC  +QTA+R+FD+   ++ V WS+MI  Y  +G   +A SL
Sbjct: 500 YG--ETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISL 557

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF----GVEPDLQHYACMVD 643
           F+ M+ + I+ +     +IL  C+         FY   +  +    G+  D    + +V 
Sbjct: 558 FQLMVAASIRIDSYICSSILSLCADIAR----PFYCKPLHGYAIKAGILSDQSVSSSLVK 613

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           + SRSG+++ + K+   +  P +   W  +++G   H
Sbjct: 614 VYSRSGNMDDSRKVFDEISVP-DLVAWTTIIDGYAQH 649



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 149/630 (23%), Positives = 299/630 (47%), Gaps = 28/630 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L     YD    T L+  YA+ G + ++   F      +   W   I  ++ ++ 
Sbjct: 192 VHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDE 251

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++LL  +M+R    I+ +   S+L AC+ +  +    ++HG ++K     D V++ +
Sbjct: 252 PVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEA 311

Query: 136 ILCTYGEFGCLDDARKVFDK---MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           ++ TY  FG ++ + KVF++   +++R +  WS+ I S   N  +   +++   M  +G+
Sbjct: 312 LISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFI-SGVSNHSLLRSVQLLRRMFHQGL 368

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+     S+  +     S+     +H   ++        +G++   MYS+C ++  + +
Sbjct: 369 RPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYK 425

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++++R   SWTAM++ +   G   +A  +F  M+    +P+ ++L  +L +C     
Sbjct: 426 VFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSEC 485

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +GK VH   +R  +  E  ++    I  Y++C  +    ++  A   ++ + W+ +IS
Sbjct: 486 LLKGKEVHGHTLR--VYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMIS 543

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            YA  G  +EA+ L   M    +  DS+  +S LS C ++        +HG+ IK     
Sbjct: 544 GYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILS 603

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D+ V SSL+ +YS+ G  + +  +F+ I    +V W ++I G+ Q+G+S  A+ +F  M 
Sbjct: 604 DQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMV 663

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
              +  D V  ++ + ACS  G +E+G  + +    +YGV  ++     + D+  + G L
Sbjct: 664 QLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRL 723

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE------VTF 603
             A+   DSM  + +++ WS ++    +H       ++  + +++ I+          T 
Sbjct: 724 AEAKYFVDSMPMKPDLMVWSTLVAACRVHDD-----TVLGRFVENKIREGNYDSGSFATL 778

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            NIL   ++SG  EE       M+    EP
Sbjct: 779 SNIL---ANSGDWEEVARIRKTMKGVNKEP 805



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 198/412 (48%), Gaps = 7/412 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVLIK 68
           +R+ +++H  +L T ++ D      LI +Y   G +  S  VF+      +  +W+  I 
Sbjct: 287 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFIS 346

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             + N+    S+ L  +M  +    ++  Y SV    SS+  +  G ++H   IK GF  
Sbjct: 347 G-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKEGFIH 402

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             ++ +++   Y     + D+ KVF++M  RD VSW++++A +  +    E    F +M+
Sbjct: 403 GILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMI 462

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            +G +PD V++ ++  AC     L   + +HGH LR   +    + + FI MYSKC  + 
Sbjct: 463 LDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTF-INDCFISMYSKCQGVQ 521

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A R F     +    W++MIS Y  +G  ++A+  F  M+      +     ++L  CA
Sbjct: 522 TARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 581

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +      K +H   I+ G+  +   +  +L++ Y+  G M +  KV   I   ++++W 
Sbjct: 582 DIARPFYCKPLHGYAIKAGILSDQS-VSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWT 640

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +I  YA+ G S+ AL +   M   G+ PD+  + S LSAC   G ++ G  
Sbjct: 641 TIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFN 692



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +F S  ++    +LH+  +  G  +     + L   Y+   +++ S  VF+  +E D   
Sbjct: 378 VFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS 437

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  +  +    E+ L +  MI +     +    ++L AC+    L  G++VHG  +
Sbjct: 438 WTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTL 497

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           +  + +   I    +  Y +   +  AR++FD    +D V WSS+I+ Y  N    E + 
Sbjct: 498 RV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAIS 556

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  MV   +  D     S+   C ++      + +HG+ ++  I  D  + +S + +YS
Sbjct: 557 LFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYS 616

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           + G++  + + F +I      +WT +I  Y + G  Q AL  F  M+++   P+ + L++
Sbjct: 617 RSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVS 676

Query: 303 VLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           VL +C+  G + +G    +      G+ PE  +    +++     G+++E +  + ++  
Sbjct: 677 VLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYC-CMVDLLGRSGRLAEAKYFVDSMPM 735

Query: 362 R-NILSWNMLIS 372
           + +++ W+ L++
Sbjct: 736 KPDLMVWSTLVA 747


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 198/648 (30%), Positives = 348/648 (53%), Gaps = 6/648 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + ++L+ CSS  ++  G +VH  +   GF++++++   ++  Y + G + +A++VF+ + 
Sbjct: 7   FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            +DV +W+ +I  Y    D    L MF+ M  E V P  VT +++  AC    SL+    
Sbjct: 67  RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IHG +L++  + D  +G + I MY+KCG +  A  +F ++E R   SWTAMI+   +   
Sbjct: 127 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 186

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           F  A   + +M      PN ITL TV  +     +L EGK V+  +    M  +   +  
Sbjct: 187 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNS 246

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A +  +   G + +  ++   + +R++++WN++I+ Y +     EA+ L  ++Q  G+  
Sbjct: 247 A-VNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKA 305

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  +    L+   ++ SL  G  IH  V +    +D  V ++L+ +Y +C     A+ +F
Sbjct: 306 NDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIF 365

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             +  K V+ W  M   + QNG   EA+ LF +M L        T +  +  C+++  L+
Sbjct: 366 VDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQ 425

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           KG+ +H  +I    R ++ ++TAL +MY KCG +  A  VF+ M++R+++ W++M+  Y 
Sbjct: 426 KGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYA 485

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDL 635
            HG  ++   LF QM   G+K + V+F+++L A SHSGSV +G  YF AM + F + P  
Sbjct: 486 QHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTP 545

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           + Y C+VDLL R+G I+ A  ++  +    P +G +W  LL  CR H + D  K   +++
Sbjct: 546 ELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP-DGILWMTLLGACRTHNKTDQAKAAAEQV 604

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                + +G Y +LSN+YA  G+WD   ++R +M   G+KK PG S+I
Sbjct: 605 LERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSI 652



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 167/656 (25%), Positives = 327/656 (49%), Gaps = 41/656 (6%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  N+    R+H H+   G   +      LI+ YA+ GS+  ++ VF+  +  D F W  
Sbjct: 16  SAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTR 75

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  Y     ++ ++ ++++M  E    +   Y ++L AC+S   L  G ++HG+I++ G
Sbjct: 76  MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 135

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F+ D  + T+++  Y + G +  A   F ++  RDVVSW+++IA+   +   +    ++ 
Sbjct: 136 FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYR 195

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M  +GV P+ +T+ ++  A G+   L   + ++G V    ++ D  + NS + M+   G
Sbjct: 196 RMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAG 255

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L  A R F  +  R   +W  +I+ Y ++  F +A+  F ++ +   + N IT + +L 
Sbjct: 256 LLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLN 315

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
               L  L +GK +H +++++        +  AL+  Y  C    +  K+   +G ++++
Sbjct: 316 VYTSLTSLAKGKVIH-ELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVI 374

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           +W ++   YA+ G  KEAL+L  +MQ  G  P S ++ + L  C ++ +LQ G QIH H+
Sbjct: 375 TWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHI 434

Query: 426 IKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           I+   + E  V+++LI+MY KCG    A  +FE++ ++ +++WNSM+  + Q+G   E +
Sbjct: 435 IENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETL 494

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF+QM L+ ++ D V+F++ + A S+ G +  G      ++     +D  I T   ++Y
Sbjct: 495 QLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAML-----QDFSI-TPTPELY 548

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
                                     ++D  G  G++ +A  +  ++  SG  P+ + +M
Sbjct: 549 G------------------------CVVDLLGRAGRIQEAVDIVLKL--SGCLPDGILWM 582

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH---YACMVDLLSRSGDIEGAFKM 657
            +L AC      ++ K     +    +E D  H   Y  + ++ + +GD +G  +M
Sbjct: 583 TLLGACRTHNKTDQAKAAAEQV----LERDPSHSGAYVVLSNVYAAAGDWDGVNRM 634



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 221/429 (51%), Gaps = 2/429 (0%)

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD    ++L + C    ++   R +H HV  R  + +  +    I MY++CG +  A++
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +E++   +WT MI  Y + G + +AL  F +M E    P  +T + +L +CA    
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L++G  +H QI+++G   +  ++G ALI  Y +CG +         +  R+++SW  +I+
Sbjct: 121 LKDGMEIHGQILQQGFEGDV-FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCK 431
              +      A  L  +MQ  G++P+  ++ +  +A G+   L  G  ++G V   +   
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMES 239

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V +S ++M+   G    A  LFE +  + VV WN +I  + QN N  EA+ LF ++ 
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQ 299

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            + ++ +++TF+  +   +++  L KGK +H  +   G  +D  + TAL  +Y +C    
Sbjct: 300 QDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPG 359

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A ++F  M  ++V++W+ M   Y  +G   +A  LF++M   G +P   T + +L  C+
Sbjct: 360 QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 419

Query: 612 HSGSVEEGK 620
           H  ++++G+
Sbjct: 420 HLAALQKGR 428



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 105/205 (51%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + ++ S T+L K   +H  +   G   D   +T L+  Y    +   +  +F      D 
Sbjct: 314 LNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDV 373

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W V+   Y  N F +E++ L+ +M  E    ++    +VL  C+ L  L  G ++H  
Sbjct: 374 ITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSH 433

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           II+  F  + V++T+++  YG+ G + +A  VF+KM  RD++ W+S++ +Y  +    E 
Sbjct: 434 IIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDET 493

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEA 205
           L++F+ M  +GV+ D V+ +S+  A
Sbjct: 494 LQLFNQMQLDGVKADAVSFVSVLSA 518



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 1/204 (0%)

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D   F+  +Q CS+   ++ G+ VH  +   G  ++  +   L  MYA+CG +  AQ+VF
Sbjct: 3   DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           + +  ++V +W+ MI  Y   G  + A  +F QM +  + P +VT++ IL AC+ + S++
Sbjct: 63  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           +G      +   G E D+     ++++ ++ G + GA+     +      S W A++  C
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS-WTAMIAAC 181

Query: 678 RIHKRIDVMKTIEKELSVTGTNDN 701
             H +  + + + + + + G   N
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPN 205


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 207/653 (31%), Positives = 340/653 (52%), Gaps = 12/653 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD-------VIQTSILCTYGEFGCLDDAR 150
           Y +++ ACS L  L  G +VH  ++       D       V+   ++  YG     D AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           +VFD+M +R+ VSW+S+IA++  N    + L +F SM+R G   D   + S   AC EL 
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            +   R +H H L+ +   D  + N+ + MYSK G +      F +I+ +   SW ++I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 271 CYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
            + + G+  +AL+ F KM+ E    PN     +   +C  +G    G+ +H   I+  + 
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  Y+G +L + YA    +       + I   +++SWN +++ Y+ +G+  EAL L  +
Sbjct: 287 RDL-YVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+  GL PD  +V   L AC    +L  G  IH +++K+    D  V +SL+ MY++C  
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + A  +F  I+ + VV WNS++    Q+ +  E + LF  +  +   +D ++    + A
Sbjct: 406 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 465

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVS 567
            + +G  E  K VH      G+  D  +   L D YAKCG L  A R+F+ M + R+V S
Sbjct: 466 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           WS++I  Y   G   +A  LF +M   GI+PN VTF+ +L ACS  G V EG +Y++ M 
Sbjct: 526 WSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 585

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             +G+ P  +H +C+VDLL+R+G +  A   I  MPF  +  +W  LL   ++H  +++ 
Sbjct: 586 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMG 645

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           K   + +     + +  Y LL NIYA  GNW+EF +++  M  +G+KK PG S
Sbjct: 646 KRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKS 698



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 179/649 (27%), Positives = 314/649 (48%), Gaps = 25/649 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTG-------LHYDPPASTRLIESYAEMGSLRSSRLVF 52
           L  +C+ LR L    R+H HL+ +        L  +      LI  Y    +  S+R VF
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109

Query: 53  DTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG 112
           D     +   WA +I  ++ N    +++ L+  M+R       F   S +RAC+ LGD+G
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 169

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           +G +VH   +K     D ++Q +++  Y + G +DD   +F+++  +D++SW SIIA + 
Sbjct: 170 TGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 229

Query: 173 DNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
                 E L++F  M+ EG   P+     S   ACG + S      IHG  ++ ++  D 
Sbjct: 230 QQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 289

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            +G S   MY++  +L SA   F +IE     SW ++++ Y+  G   +AL  F +M + 
Sbjct: 290 YVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDS 349

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              P+ IT+  +L +C G   L  G+ +H  +++ G+  +      +L+  YA C  +S 
Sbjct: 350 GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN-SLLSMYARCSDLSS 408

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              V H I ++++++WN +++  A+    +E L+L   +       D  S+ + LSA   
Sbjct: 409 AMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAE 468

Query: 412 VGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNS 469
           +G  ++  Q+H +  K     D  + ++LID Y+KCG  + A  LFE +   + V  W+S
Sbjct: 469 LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSS 528

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISY 528
           +I G+ Q G + EA++LF +M    +  + VTF+  + ACS +G + +G + +  +   Y
Sbjct: 529 LIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEY 588

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASL 587
           G+       + + D+ A+ G L  A    D M  E +++ W  ++    MH  +      
Sbjct: 589 GIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRA 648

Query: 588 FKQMLDSGIKPNE----VTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
            + +L+  I P+     V   NI  A   SG+  E      AMR  GV+
Sbjct: 649 AEGILN--IDPSHSAAYVLLCNIYAA---SGNWNEFARLKKAMRTSGVK 692


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 202/645 (31%), Positives = 357/645 (55%), Gaps = 16/645 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           V R+C+   ++   +++H  ++  G  +D V+ T ++  Y   G L  +   F  +  ++
Sbjct: 57  VFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           + SW+S++++Y       + +     ++   GV PDF T   + +AC    SL     +H
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMH 170

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             VL+   + D  +  S I +YS+ G +  A + FV +  R   SW AMIS + ++G   
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +AL    +M   + + + +T+ ++L  CA    +  G  VH  +I+ G+  +  ++  AL
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDV-FVSNAL 289

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           I  Y++ G++ + ++V   +  R+++SWN +I+ Y +      AL    +M   G+ PD 
Sbjct: 290 INMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDL 349

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK----DEFVQSSLIDMYSKCGFKNLAYLL 455
            +V S  S  G +   ++G  +HG V++  C+    D  + ++L++MY+K G  + A  +
Sbjct: 350 LTVVSLASIFGQLSDRRIGRAVHGFVVR--CRWLEVDIVIGNALVNMYAKLGSIDCARAV 407

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLEMDEVTFLTAIQACSNIGQ 514
           FE++  + V+ WN++I G+ QNG + EAI+ ++ M     +  ++ T+++ + A S++G 
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGA 467

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L++G  +H +LI   +  D+++ T L DMY KCG L+ A  +F  + +   V W+A+I  
Sbjct: 468 LQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISS 527

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
            G+HG    A  LFK M   G+K + +TF+++L ACSHSG V+E ++ F+ M + + ++P
Sbjct: 528 LGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKP 587

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           +L+HY CMVDL  R+G +E A+ ++ +MP  A+ SIWG LL  CRIH   ++       L
Sbjct: 588 NLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRL 647

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
               + + GYY LLSNIYA  G W+   KVRS+    GL+K PG+
Sbjct: 648 LEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGW 692



 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 201/661 (30%), Positives = 340/661 (51%), Gaps = 46/661 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +FRSCTN+    +LHA LLV G   D    T+L+  YA +G L  S   F   +  + F 
Sbjct: 57  VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
           W  ++  Y+    + +S+    +++       +F  +P VL+AC SL D   GEK+H  +
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWV 173

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K GF+ D  +  S++  Y  FG ++ A KVF  M  RDV SW+++I+ +  N +V+E L
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++   M  E V+ D VT+ S+   C +   +     +H +V++  ++ D  + N+ I MY
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMY 293

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           SK G L  A+R F  +E R   SW ++I+ Y ++     AL  F +ML V   P+L+T++
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVV 353

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++      L   R G++VH  ++R         +G AL+  YA+ G +     V   +  
Sbjct: 354 SLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPS 413

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           R+++SWN LI+ YA+ G++ EA++    M+    ++P+  +  S L A  +VG+LQ G++
Sbjct: 414 RDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK 473

Query: 421 IHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IHG +IK +C   D FV + LIDMY KCG    A  LF  I Q++ V WN++I     +G
Sbjct: 474 IHGRLIK-NCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHG 532

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +  +A+ LF  M  + ++ D +TF++ + ACS+ G +++ +W                  
Sbjct: 533 HGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQW------------------ 574

Query: 539 ALTDMYAKCGD-LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
                   C D +Q   R+     + N+  +  M+D +G  G L  A +L   M    I+
Sbjct: 575 --------CFDTMQKEYRI-----KPNLKHYGCMVDLFGRAGYLEKAYNLVSNM---PIQ 618

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAFK 656
            +   +  +L AC   G+ E G F  +  R+  V+ + + +Y  + ++ +  G  EGA K
Sbjct: 619 ADASIWGTLLAACRIHGNAELGTFASD--RLLEVDSENVGYYVLLSNIYANVGKWEGAVK 676

Query: 657 M 657
           +
Sbjct: 677 V 677



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 270/545 (49%), Gaps = 25/545 (4%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C +L    ++H  +L  G  +D   +  LI  Y+  G++  +  VF      D  
Sbjct: 155 PVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVG 214

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  +  N    E++ +  +M  E+  +      S+L  C+   D+  G  VH  +
Sbjct: 215 SWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYV 274

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK G + D  +  +++  Y +FG L DA++VFD M  RD+VSW+SIIA+Y  N D    L
Sbjct: 275 IKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTAL 334

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR-RKIKIDGPLGNSFIVM 240
             F  M+  G+ PD +T++SLA   G+L   R  R++HG V+R R +++D  +GN+ + M
Sbjct: 335 GFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNM 394

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
           Y+K G +  A   F ++  R   SW  +I+ Y ++G   +A++++  M E +   PN  T
Sbjct: 395 YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGT 454

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++L + + +G L++G  +H ++I+  +  +  ++   LI+ Y +CG++ +   + + I
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDV-FVATCLIDMYGKCGRLEDAMSLFYEI 513

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG------ 413
            +   + WN +IS     G  ++AL+L   M+  G+  D  +  S LSAC + G      
Sbjct: 514 PQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQ 573

Query: 414 ----SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWN 468
               ++Q   +I  ++    C        ++D++ + G+   AY L   +  Q    +W 
Sbjct: 574 WCFDTMQKEYRIKPNLKHYGC--------MVDLFGRAGYLEKAYNLVSNMPIQADASIWG 625

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC-SNIGQLEKGKWVHHKLIS 527
           +++     +GN+   +  F    L  ++ + V +   +    +N+G+ E    V      
Sbjct: 626 TLLAACRIHGNA--ELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARD 683

Query: 528 YGVRK 532
            G+RK
Sbjct: 684 RGLRK 688


>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/633 (33%), Positives = 342/633 (54%), Gaps = 38/633 (6%)

Query: 116  KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            K HG +I  G   + +  T ++  YG  G +  AR VFD+M + D  +W  +I  YF N 
Sbjct: 1138 KFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLND 1197

Query: 176  DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
               + +  ++ M     E D +    + +AC EL  +   R +H  +    +K+ GP  +
Sbjct: 1198 LFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQI----VKVGGP--D 1251

Query: 236  SFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
            SF++     MY KCG +  +   F +I  +   SWT+MI+ Y ++   ++ L  F +M +
Sbjct: 1252 SFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRD 1311

Query: 291  VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               E N  TL +++ +   L  L +GK VH   I K +     +L    ++ Y +CG+  
Sbjct: 1312 ALVESNPFTLGSIINAFTKLRALHQGKWVHGYAI-KNIAELSSFLATTFLDMYVKCGQTR 1370

Query: 351  ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
            +   +   +   +++SW ++I  Y +     + L L        L+P+S           
Sbjct: 1371 DARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNS----------- 1419

Query: 411  NVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
                LQ+  Q          +  F+ ++LIDMY+KC   + AY +F  + +K V+ WNSM
Sbjct: 1420 --ALLQVFFQ----------RVRFL-NALIDMYAKCHTISDAYAIFHGVLEKDVITWNSM 1466

Query: 471  ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
            I G+ QNG++ +A+ LF+QM    L  D +T ++ + A + +G ++ G  +H   +  G+
Sbjct: 1467 ISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGL 1526

Query: 531  -RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
               ++YI TAL + YAKCGD ++A+ VFDSM  +N+++WSAMI  YG+ G  + + S+F 
Sbjct: 1527 FSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFS 1586

Query: 590  QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
             ML   +KPNEV F  +L ACS+SG VEEG  YF +M + +   P ++HYACMVDLL+RS
Sbjct: 1587 NMLKEDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHYACMVDLLARS 1646

Query: 649  GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
            G ++ A   I  MP   + S++GA L+GC ++ R D+ + + +E+     N+  YY L+S
Sbjct: 1647 GKLDEALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVS 1706

Query: 709  NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            N+YA +G W +  +VR +M   GL KVPGYS +
Sbjct: 1707 NLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLV 1739



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 305/588 (51%), Gaps = 31/588 (5%)

Query: 9    NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
            N+  L + H  L+V GL  +    T+L+  Y  +G +RS+R+VFD    PD + W V+I+
Sbjct: 1132 NIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIR 1191

Query: 69   CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
             Y  N+ F + I  Y++M        N I+  +L+ACS L ++  G KVH +I+K G   
Sbjct: 1192 WYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVG-GP 1250

Query: 129  DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
            D  + T ++  YG+ G ++ +  VF+++  ++VVSW+S+IA Y  N    EGL +F+ M 
Sbjct: 1251 DSFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMR 1310

Query: 189  REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
               VE +  T+ S+  A  +L +L   + +HG+ ++   ++   L  +F+ MY KCG   
Sbjct: 1311 DALVESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTR 1370

Query: 249  SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
             A   + ++      SWT MI  Y ++      L  F   +     PN   L        
Sbjct: 1371 DARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSALL-------- 1422

Query: 309  GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
                      V  Q +R        +L  ALI+ YA+C  +S+   + H + E+++++WN
Sbjct: 1423 ---------QVFFQRVR--------FLN-ALIDMYAKCHTISDAYAIFHGVLEKDVITWN 1464

Query: 369  MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK- 427
             +IS YA+ G + +AL L  QM+++ L PD+ ++ S+LSA   +G++Q+G  +H + +K 
Sbjct: 1465 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKG 1524

Query: 428  -IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
             +   + ++ ++L++ Y+KCG    A ++F+ +  K+++ W++MI G+   G+   ++++
Sbjct: 1525 GLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSI 1584

Query: 487  FHQMYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYA 545
            F  M    L+ +EV F T + ACS  G +E+ G++    +  Y     +     + D+ A
Sbjct: 1585 FSNMLKEDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHYACMVDLLA 1644

Query: 546  KCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            + G L  A      M  +R+V  + A +   G++ + +    + ++ML
Sbjct: 1645 RSGKLDEALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREML 1692


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 225/729 (30%), Positives = 371/729 (50%), Gaps = 26/729 (3%)

Query: 1   MPLFRSCTNLRKL-TRLHAHLLV--TGLHYDPPASTRLIESYAEMGS-LRSSRLVFDTFK 56
           + +  +C++L  L T  H H L   +GL +       LI  Y +       +R VF    
Sbjct: 216 LTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRIS 275

Query: 57  EPDSFMWAVLIKCY--MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
            P    W+  I  Y   W     E+I  +  M  E    +     SVLRAC+++G    G
Sbjct: 276 RPSVISWSAFIAAYGQHW-----EAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQG 330

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
            ++H  ++   + ++  +  +    Y +   + DA +VF  +  +D VSW++I+++Y   
Sbjct: 331 RRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQ 390

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC---------GELCSLRPARSIHGHVLRR 225
               + + +   M  EG  PD +T +++  +C         G   SL   R +H  ++  
Sbjct: 391 GLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISN 450

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
            +  D  LGN  + MY +CG L  A   F  I +R   SWT +IS   ++G   + LE  
Sbjct: 451 GLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELL 510

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYA 344
             M     E N IT I++LG+C+  G L  GK++H +I  KG+  E D +   AL+  Y 
Sbjct: 511 KSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGL--ESDIITSNALLNMYT 568

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
            C  + E   V   +  R+++SW ++IS YA  G   EAL+L  +M+     PD+ ++ S
Sbjct: 569 TCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLIS 628

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            L AC ++ +L  G  IH  ++    + D FV ++++  Y KC     A  +F+RI  K 
Sbjct: 629 VLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKD 688

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           +V WN+MI  + QN    +A  L+ +M  N +  ++VT +T + +CS+  ++E+G  +H 
Sbjct: 689 IVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHR 748

Query: 524 KLISYGVRKDIYIDTALTDMYAKC-GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
           +  + G      +  AL +MYAKC G+L+ AQ  F+S++ +NVVSWS+++  Y  +G+ +
Sbjct: 749 EAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEED 808

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACM 641
            A +LF  M   G+ PN VTF ++L ACSH+G  +EG  YF +M+    +EP  +HY CM
Sbjct: 809 RARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCM 868

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           V+LL++SG ++ A   + +MP   + S W +LL  C +H   +      K+L      ++
Sbjct: 869 VNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNS 928

Query: 702 GYYTLLSNI 710
             Y LL NI
Sbjct: 929 AAYVLLYNI 937



 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 191/615 (31%), Positives = 318/615 (51%), Gaps = 15/615 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH H L T    D      LI  Y++ GSL  +  VF+    PD   W  +I  Y  +  
Sbjct: 133 LHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGK 192

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E +   + KM +E    +   + +VL  CSSL  L +G+ VH   +  G D    ++ S
Sbjct: 193 LECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENS 252

Query: 136 ILCTYGEFG-CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++  YG+     D+AR+VF +++   V+SWS+ IA+Y  +    E +K F  M  EGV+P
Sbjct: 253 LISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIKTFELMNLEGVKP 309

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T+ S+  AC  + +    R IH  VL      +  + N+   +Y+KC  +  A R F
Sbjct: 310 NATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVF 369

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             I  +   SW A++S Y + G F+ A+    +M      P+ IT IT+L SC+    L+
Sbjct: 370 SSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLK 429

Query: 315 E---------GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +         G+ VH Q+I  G+  +  YLG  L++ Y  CG + +       I +RN+ 
Sbjct: 430 QYGNSKSLTDGRQVHSQMISNGLDGD-TYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVF 488

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SW +LIS   + G + E LELL  M   G   +  +  S L AC   G L LG  IH  +
Sbjct: 489 SWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERI 548

Query: 426 IKIDCKDEFVQS-SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
                + + + S +L++MY+ C   + A L+FER+  + VV W  +I  +   G  LEA+
Sbjct: 549 RTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEAL 608

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            L+ +M       D VT ++ ++AC+++  L +GK +H ++++ GV  D+++ TA+   Y
Sbjct: 609 QLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFY 668

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KC  ++ A++VFD + ++++V W+AMI  Y  +     A +L+ +M+++ + PN+VT +
Sbjct: 669 GKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLI 728

Query: 605 NILWACSHSGSVEEG 619
            +L +CS +  +E G
Sbjct: 729 TLLDSCSSTCKMERG 743



 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/655 (29%), Positives = 325/655 (49%), Gaps = 17/655 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA +L +GL      S  L+  Y + GS+  +R  FD   E D   W  +I  Y  + 
Sbjct: 31  QIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQHE 90

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +++I LY     E        + S+L AC + GDL  G  +H   +   F  D ++  
Sbjct: 91  CGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCN 150

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++  Y + G LDDA  VF+     DV +W+++IA+Y  +  +      +  M +EG+  
Sbjct: 151 GLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRS 210

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER-T 253
           + +T L++ + C  L  L   + +H   L   +     + NS I MY KC       R  
Sbjct: 211 NEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREV 270

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F++I +    SW+A I+ Y   G   +A+++F  M     +PN  TL +VL +CA +G  
Sbjct: 271 FLRISRPSVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAH 327

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +G+ +H  ++          L  A    YA+C ++++  +V  +I  ++ +SWN ++S 
Sbjct: 328 EQGRRIHALVLAGPYTQNTTVLNAA-ASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSA 386

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC---------GNVGSLQLGLQIHGH 424
           YA++G+ ++A+ L  QMQ  G +PD  +  + L +C         GN  SL  G Q+H  
Sbjct: 387 YAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQ 446

Query: 425 VIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +I   +D  D ++ + L+ MY +CG  + A   F+ I Q++V  W  +I    QNG + E
Sbjct: 447 MISNGLD-GDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASE 505

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            + L   M L   E +++TF++ + ACS  G L  GK +H ++ + G+  DI    AL +
Sbjct: 506 GLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLN 565

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY  C  L  A+ VF+ M  R+VVSW+ +I  Y   G   +A  L+++M     +P+ VT
Sbjct: 566 MYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVT 625

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            +++L AC+   ++ EGK     +   GVE D+     +V    +   +E A ++
Sbjct: 626 LISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQV 680



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 172/578 (29%), Positives = 291/578 (50%), Gaps = 21/578 (3%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           + + AC++LGD   G+++H RI+  G     ++  S++  YG+ G +++AR  FD+M  R
Sbjct: 15  NAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPER 74

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           D++SW+++I  Y  +    + ++++     EG +PD VT  SL  AC     L+  R +H
Sbjct: 75  DLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLH 134

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
            H L      D  + N  I MYS CG L  A   F    +    +WT +I+ Y R G  +
Sbjct: 135 EHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLE 194

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY---LG 336
            A  ++ KM +     N IT +TVL +C+ L  L  GK VH    R  +G   D+   + 
Sbjct: 195 CAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVH----RLALGSGLDFSLRME 250

Query: 337 PALIEFYAECGKM-SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            +LI  Y +C +   E  +V   I   +++SW+  I+ Y   G   EA++    M   G+
Sbjct: 251 NSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIKTFELMNLEGV 307

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
            P++ ++ S L AC  VG+ + G +IH  V+     ++  V ++   +Y+KC     A  
Sbjct: 308 KPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASR 367

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS---- 510
           +F  I  K  V WN+++  + + G   +AI L  QM +     D++TF+T + +CS    
Sbjct: 368 VFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSAL 427

Query: 511 -----NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
                N   L  G+ VH ++IS G+  D Y+   L  MY +CG L  A+  F  + +RNV
Sbjct: 428 LKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNV 487

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            SW+ +I     +G+ ++   L K M   G + N++TF+++L ACS +G +  GK     
Sbjct: 488 FSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHER 547

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           +R  G+E D+     ++++ +    ++ A  +   M F
Sbjct: 548 IRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVF 585



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 233/486 (47%), Gaps = 22/486 (4%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           EGV  D +T+L+   AC  L      + IH  +L   +     L NS + MY KCG +  
Sbjct: 4   EGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEE 63

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F ++ +R   SW AMI+ Y +    ++A++ +        +P+ +T  ++L +C  
Sbjct: 64  ARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFA 123

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
            G L+ G+ +H   +      +   +   LI  Y++CG + +   V       ++ +W  
Sbjct: 124 SGDLKFGRMLHEHFLGTSFVSD-QIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTT 182

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I+ Y R G  + A     +M   GL  +  +  + L  C ++  L+ G   H H + + 
Sbjct: 183 VIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGK--HVHRLALG 240

Query: 430 CKDEF---VQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
              +F   +++SLI MY KC    + A  +F RI + SV+ W++ I  +   G   EAI 
Sbjct: 241 SGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIK 297

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
            F  M L  ++ +  T  + ++AC+ +G  E+G+ +H  +++    ++  +  A   +YA
Sbjct: 298 TFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYA 357

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KC  +  A RVF S+  ++ VSW+A++  Y   G   DA  L +QM   G  P+++TF+ 
Sbjct: 358 KCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFIT 417

Query: 606 ILWACSHSG---------SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---DIEG 653
           IL++CS S          S+ +G+   + M   G++ D      +V +  R G   D   
Sbjct: 418 ILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARA 477

Query: 654 AFKMIH 659
           AF+ IH
Sbjct: 478 AFQGIH 483



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 1/232 (0%)

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGF 448
           M   G+  D  ++ +++SAC  +G    G QIH  ++         + +SL+ MY KCG 
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A   F+R+ ++ ++ WN+MI  + Q+    +AI L+    L   + DEVTF + + A
Sbjct: 61  VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C   G L+ G+ +H   +      D  +   L  MY+ CG L  A  VF+     +V +W
Sbjct: 121 CFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTW 180

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           + +I  Y  HG+L  A + + +M   G++ NE+TF+ +L  CS    +E GK
Sbjct: 181 TTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGK 232


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 212/665 (31%), Positives = 358/665 (53%), Gaps = 29/665 (4%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVIQTSILCTYGEFGCLDDARKVF 153
            F  P  L++C   GD   G +VH    K G  D D  +  S++  YG  G +DDA KVF
Sbjct: 67  RFTLPPALKSCR--GD--DGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVF 122

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE---GVEPDFVTMLSLAEACGELC 210
           + M  R++VSW++++A+    AD   GL++F   + +      PD  T++++   C  L 
Sbjct: 123 EGMAGRNLVSWNALMAAV---ADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALA 179

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK---RCTTSWTA 267
                R++HG  ++        + N  + MY+KCG++  AE  F++      R   SW  
Sbjct: 180 WPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNV 239

Query: 268 MISCYNRSGWFQKALESFVKM-LEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           M+  Y R+G    A     +M +E +  P + IT+++VL  C+GL  L + + +H  ++R
Sbjct: 240 MLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVR 299

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
           +G+    D +  ALI  Y  CG +    +V   I  + + SWN LI  +A+ G +  A+E
Sbjct: 300 RGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIE 359

Query: 386 LLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMY 443
           L  +M    G  PD FS+ S L ACGN+  L  G   HG +++    KD F++ SL+ +Y
Sbjct: 360 LFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVY 419

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM------YLNCLEM 497
            +CG ++LA +LF+ +++K  V WN+MI G+ QNG   E++ LF +M      +   L  
Sbjct: 420 IQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSL-- 477

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
             +   +A+ ACS +  +  GK +H   +   + +D ++ +++ DMY+KCG +  A+  F
Sbjct: 478 --LAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFF 535

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D +  ++ VSW+ MI  Y ++G+  +A  L+ +M   G++P+  T++ +L AC H+G +E
Sbjct: 536 DRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLE 595

Query: 618 EGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +G  +F  MR +  +E  L+HYAC++ +LSR+G    A  ++  MP   +  I  ++L+ 
Sbjct: 596 DGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSA 655

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           C +H  +++ K +  +L     +   +Y L SN+YA    WDE  KVR ++   G+ K P
Sbjct: 656 CHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEP 715

Query: 737 GYSTI 741
           G S I
Sbjct: 716 GCSWI 720



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 196/433 (45%), Gaps = 38/433 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPP-ASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +P+      L KL  LHA ++  GLH         LI +Y   G L  +  VFD      
Sbjct: 278 LPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKM 337

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVH 118
              W  LI  +  N     +I L+ +M        + F   S+L AC +L  L  G+  H
Sbjct: 338 VSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAH 397

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G I++ G +KD  I+ S+L  Y + G    AR +FD +  +D VSW+++IA Y  N    
Sbjct: 398 GFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPG 457

Query: 179 EGLKMFHSMV--REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           E L++F  M   + G  P  +   S   AC EL ++R  + +H   L+  +  D  L +S
Sbjct: 458 ESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSS 517

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MYSKCG +  A   F +++ +   SWT MI+ Y  +G  ++A+  + KM     EP+
Sbjct: 518 IIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPD 577

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T + +L +C   G L +G                       + F+ E   M    K+ 
Sbjct: 578 GFTYLGLLMACGHAGMLEDG-----------------------LCFFQE---MRNLPKI- 610

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               E  +  +  +I   +R G   +A+ L+  M      PD+  ++S LSAC   G ++
Sbjct: 611 ----EAKLEHYACVIGMLSRAGRFADAVALMEVMPE---EPDAKILSSVLSACHMHGEVE 663

Query: 417 LGLQIHGHVIKID 429
           LG ++   +++++
Sbjct: 664 LGKKVADKLLELE 676


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 216/684 (31%), Positives = 364/684 (53%), Gaps = 47/684 (6%)

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL---CTYGEFGCLDDARKVFDK 155
           PS L+ C ++ +L   +  H  + K G D D    T ++   C  G    L  A++VF+ 
Sbjct: 35  PSSLKNCKTIDEL---KMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFEN 91

Query: 156 MTSRDV-VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
             S      ++S+I  Y  +    E + +F  M+  G+ PD  T       C +      
Sbjct: 92  GESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGN 151

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              IHG +++     D  + NS +  Y++CG+L  A + F ++ +R   SWT+MI  Y R
Sbjct: 152 GIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYAR 211

Query: 275 SGWFQKALESFVKMLEVKEE---PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
             + + A++ F +M  V++E   PN +T++ V+ +CA L  L  G+ V+   IR      
Sbjct: 212 REFAKDAVDLFFRM--VRDEDVIPNSVTMVCVISACAKLEDLETGEKVY-DFIRDSGIEV 268

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
            D +  AL++ Y +C  +   +++    G  N+   N + S Y R+G++KEAL +L  M 
Sbjct: 269 NDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMM 328

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKN 450
             G+ PD  S+ S++S+C  + ++  G   HG+V++   +  + + ++LIDMY KC  ++
Sbjct: 329 DSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 388

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNG---------NSL-------------------- 481
            A+ +F+R+  K+VV WNS++ G+ +NG         N++                    
Sbjct: 389 TAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENM 448

Query: 482 --EAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
             EAI +FH M    C+ +D VT ++   AC ++G L+  KW+++ +    ++ D+ + T
Sbjct: 449 YEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGT 508

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
            L DM+++CGD ++A  +F+S++ R+V +W+A I    M G +  A  LF +M++ G+KP
Sbjct: 509 TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKP 568

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + V F+  L AC H G V++GK  FN+M ++ GV P+  HY CMVDLL R+G +E A ++
Sbjct: 569 DGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQL 628

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MP   N  IW +LL  CR+   +++     +++ V      G Y LLSN+YA  G W
Sbjct: 629 IKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRW 688

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           ++  KVR  M+  GL+K PG S I
Sbjct: 689 NDMAKVRLSMKEKGLRKPPGTSVI 712



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 188/675 (27%), Positives = 322/675 (47%), Gaps = 88/675 (13%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--- 60
            ++C  + +L   H  L   GL  D  A T+L+    E+G+  S     + F+  +S   
Sbjct: 38  LKNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGT 97

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            FM+  LI+ Y  +   +E+ILL+ +M+    +   + +P  L  C+   D G+G ++HG
Sbjct: 98  CFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHG 157

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            IIK  + KD  +Q S++  Y E G LD ARKVFD+M+ R+VVSW+S+I  Y       +
Sbjct: 158 LIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKD 217

Query: 180 GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            + +F  MVR E V P+ VTM+ +  AC +L  L     ++  +    I+++  + ++ +
Sbjct: 218 AVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALV 277

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KC  +  A+R F +          AM S Y R G  ++AL     M++    P+ I
Sbjct: 278 DMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRI 337

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC------------ 346
           ++++ + SC+ L  +  GKS H  ++R G    +D +  ALI+ Y +C            
Sbjct: 338 SMLSAISSCSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDR 396

Query: 347 -------------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                              G++    +  + + E+NI+SWN +IS   ++ M +EA+E+ 
Sbjct: 397 MSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVF 456

Query: 388 VQMQTWGLMP-DSFSVASSLSACGNVGSLQLGLQIHGHV----IKIDCKDEFVQSSLIDM 442
             MQ+   +  D  ++ S  SACG++G+L L   I+ ++    I++D +   + ++L+DM
Sbjct: 457 HYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVR---LGTTLVDM 513

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           +S+CG    A  +F  +  + V  W + I      GN   AI LF++M    L+ D V F
Sbjct: 514 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVF 573

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           + A+ AC + G +++GK                                    +F+SM +
Sbjct: 574 IGALTACCHGGLVQQGK-----------------------------------EIFNSMEK 598

Query: 563 RNVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
            + VS     +  M+D  G  G L +A  L K M     +PN+V + ++L AC   G+VE
Sbjct: 599 LHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDM---PTEPNDVIWNSLLAACRVQGNVE 655

Query: 618 EGKFYFNAMRIFGVE 632
              F    +++   E
Sbjct: 656 MAAFAAEKIQVLAPE 670


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 200/630 (31%), Positives = 346/630 (54%), Gaps = 4/630 (0%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           + +H +IIK     +  +   ++  Y + G L  AR VFD+ +  +    +++IA +  N
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
               E  ++F  M    +E +  T +   +AC +L        I    +RR   +   +G
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           +S +    K G L  A++ F  + ++    W ++I  Y + G F ++++ F++M+     
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ +T+  +L +C   G  + G   H  ++  GMG +  ++  +L++ Y+  G       
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDV-FVLTSLVDMYSNLGDTGSAAL 302

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V  ++  R+++SWN +IS Y + GM  E+  L  ++   G   DS ++ S +  C     
Sbjct: 303 VFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSD 362

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSS-LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L+ G  +H  +I+ + +   V S+ ++DMYSKCG    A ++F R+ +K+V+ W +M+ G
Sbjct: 363 LENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVG 422

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             QNG + +A+ LF QM    +  + VT ++ +  C+++G L KG+ VH   I +G   D
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFD 482

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDS-MSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
             I +AL DMYAKCG + +A+++F++    ++V+  ++MI  YGMHG    A  ++ +M+
Sbjct: 483 AVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMI 542

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
           +  +KPN+ TF+++L ACSHSG VEEGK  F++M R   V P  +HYAC+VDL SR+G +
Sbjct: 543 EERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRL 602

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           E A +++  MPF  +  +  ALL+GCR HK  ++   I   L      ++G Y +LSNIY
Sbjct: 603 EEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIY 662

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           AE   W+    +R +M + G+KK+PGYS I
Sbjct: 663 AEARKWESVNYIRGLMRMQGMKKIPGYSLI 692



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 160/561 (28%), Positives = 289/561 (51%), Gaps = 4/561 (0%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L +    L  +  +HA ++   +  +   + +LI  Y+++G L  +R VFD    P++ +
Sbjct: 53  LHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAV 112

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
              +I  ++ N    E   L+  M      I+++     L+AC+ L D   G ++    +
Sbjct: 113 CNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAV 172

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + GF     + +S++    + G L DA+KVFD M  +DVV W+SII  Y       E ++
Sbjct: 173 RRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQ 232

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           MF  M+  G+ P  VTM +L +ACG+    +     H +VL   +  D  +  S + MYS
Sbjct: 233 MFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYS 292

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
             GD  SA   F  +  R   SW AMIS Y ++G   ++   F ++++     +  TL++
Sbjct: 293 NLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVS 352

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           ++  C+    L  G+ +H  IIRK +   +  L  A+++ Y++CG + +   V   +G++
Sbjct: 353 LIRGCSQTSDLENGRILHSCIIRKEL-ESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKK 411

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           N+++W  ++   ++ G +++AL+L  QMQ   +  +S ++ S +  C ++GSL  G  +H
Sbjct: 412 NVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVH 471

Query: 423 GHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF-ERIQQKSVVMWNSMICGFYQNGNS 480
            H I+     D  + S+LIDMY+KCG  + A  LF      K V++ NSMI G+  +G+ 
Sbjct: 472 AHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHG 531

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTA 539
             A+ ++ +M    L+ ++ TF++ + ACS+ G +E+GK + H +   + VR        
Sbjct: 532 RYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYAC 591

Query: 540 LTDMYAKCGDLQTAQRVFDSM 560
           L D++++ G L+ A  +   M
Sbjct: 592 LVDLHSRAGRLEEADELVKQM 612



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 235/478 (49%), Gaps = 9/478 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           G H      + ++    + G L  ++ VFD   E D   W  +I  Y+    F ESI ++
Sbjct: 175 GFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMF 234

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
            +MI      S     ++L+AC   G    G   H  ++  G   D  + TS++  Y   
Sbjct: 235 LEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNL 294

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G    A  VFD M SR ++SW+++I+ Y  N  + E   +F  +V+ G   D  T++SL 
Sbjct: 295 GDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLI 354

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
             C +   L   R +H  ++R++++    L  + + MYSKCG +  A   F ++ K+   
Sbjct: 355 RGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVI 414

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           +WTAM+   +++G+ + AL+ F +M E K   N +TL++++  CA LG L +G++VH   
Sbjct: 415 TWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHF 474

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVI-HAIGERNILSWNMLISEYARKGMSKE 382
           IR G   +   +  ALI+ YA+CGK+   EK+  +    ++++  N +I  Y   G  + 
Sbjct: 475 IRHGYAFD-AVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRY 533

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI-HGHVIKIDCKDEFVQ-SSLI 440
           AL +  +M    L P+  +  S L+AC + G ++ G  + H      D + +    + L+
Sbjct: 534 ALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLV 593

Query: 441 DMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQM----YLN 493
           D++S+ G    A  L +++  Q S  +  +++ G   + N+   I +  ++    YLN
Sbjct: 594 DLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLN 651


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 187/529 (35%), Positives = 306/529 (57%), Gaps = 4/529 (0%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           + IH  +L   ++  G L    I   S  GD+  A + F  + +     W A+I  Y+R+
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
             FQ AL  +  M   +  P+  T   +L +C+GL  L+ G+ VH Q+ R G   +  ++
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV-FV 156

Query: 336 GPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
              LI  YA+C ++     V   +   ER I+SW  ++S YA+ G   EALE+  QM+  
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
            + PD  ++ S L+A   +  L+ G  IH  V+K+  + E  +  SL  MY+KCG    A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
            +LF++++  ++++WN+MI G+ +NG + EAI++FH+M    +  D ++  +AI AC+ +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G LE+ + ++  +     R D++I +AL DM+AKCG ++ A+ VFD   +R+VV WSAMI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             YG+HG+  +A SL++ M   G+ PN+VTF+ +L AC+HSG V EG ++FN M    + 
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN 456

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P  QHYAC++DLL R+G ++ A+++I  MP     ++WGALL+ C+ H+ +++ +   ++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L     ++ G+Y  LSN+YA    WD   +VR  M+  GL K  G S +
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 284/568 (50%), Gaps = 50/568 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  S T+  +L ++HA LLV GL +     T+LI + +  G +  +R VFD    P  F 
Sbjct: 27  LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+ Y  NN F++++L+Y  M   + +  +F +P +L+ACS L  L  G  VH ++ 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEG 180
           + GFD D  +Q  ++  Y +   L  AR VF+   +  R +VSW++I+++Y  N +  E 
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++F  M +  V+PD+V ++S+  A   L  L+  RSIH  V++  ++I+  L  S   M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A+  F K++      W AMIS Y ++G+ ++A++ F +M+     P+ I++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            + + +CA +G L + +S++  + R     +  ++  ALI+ +A+CG +     V     
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDV-FISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +R+++ W+ +I  Y   G ++EA+ L   M+  G+ P+  +    L AC + G ++ G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 421 IHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQN 477
               +   KI+ + +   + +ID+  + G  + AY + + +  Q  V +W ++       
Sbjct: 446 FFNRMADHKINPQQQHY-ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL------- 497

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
                                       + AC     +E G++   +L S        ID
Sbjct: 498 ----------------------------LSACKKHRHVELGEYAAQQLFS--------ID 521

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNV 565
            + T  Y +  +L  A R++D ++E  V
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRV 549


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 201/604 (33%), Positives = 325/604 (53%), Gaps = 7/604 (1%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L  AR +FD++ +  +  ++++I +Y                 R   +P+  T   + 
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +AC  L  LR AR++H H  R  +  D  +  + + +Y+KC     A   F ++  R   
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           +W AM++ Y   G +   +   + +++    PN  TL+ +L   A  G L +G++VH   
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255

Query: 324 IRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
           +R     ++     +G AL++ YA+CG +    +V  A+  RN ++W+ L+  +   G  
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315

Query: 381 KEALELLVQMQTWGL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SS 438
            EA  L   M   GL      SVAS+L AC N+  L LG Q+H  + K     +    +S
Sbjct: 316 LEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNS 375

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+ MY+K G  + A  LF+++  K  V +++++ G+ QNG + EA  +F +M    ++ D
Sbjct: 376 LLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPD 435

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
             T ++ I ACS++  L+ GK  H  +I  G+  +  I  AL DMYAKCG +  ++++FD
Sbjct: 436 VATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFD 495

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M  R++VSW+ MI  YG+HG   +A +LF  M     +P++VTF+ ++ ACSHSG V E
Sbjct: 496 VMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTE 555

Query: 619 GKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           GK +F+ M   +G+ P ++HY  MVDLL+R G ++ A++ I  MP  A+  +WGALL  C
Sbjct: 556 GKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGAC 615

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           R+HK ID+ K +   +   G    G + LLSNI++  G +DE  +VR I +  G KK PG
Sbjct: 616 RVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPG 675

Query: 738 YSTI 741
            S I
Sbjct: 676 CSWI 679



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 280/580 (48%), Gaps = 18/580 (3%)

Query: 43  GSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL 102
           G L  +R +FD    P    +  LI+ Y          L      R     +N+ +P VL
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVV 162
           +ACS+L DL S   VH    + G   D  + T+++  Y +      A  VF +M +RDVV
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           +W++++A Y  +   S+ +     ++++   P+  T+++L     +  +L   R++H + 
Sbjct: 197 AWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255

Query: 223 LRR---KIKIDGPL-GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           +R        DG L G + + MY+KCG L+ A R F  +  R   +W+A++  +   G  
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315

Query: 279 QKALESFVKMLEVK---EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
            +A   F  ML        P   ++ + L +CA L  L  GK +H  + + G+  +    
Sbjct: 316 LEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLHTDLT-A 372

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
           G +L+  YA+ G + +   +   +  ++ +S++ L+S Y + G + EA  +  +MQ   +
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYL 454
            PD  ++ S + AC ++ +LQ G   HG VI      E  + ++LIDMY+KCG  +L+  
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQ 492

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+ +  + +V WN+MI G+  +G   EA  LF  M     E D+VTF+  I ACS+ G 
Sbjct: 493 IFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGL 552

Query: 515 LEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
           + +GK W H     YG+   +     + D+ A+ G L  A +    M  + +V  W A++
Sbjct: 553 VTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612

Query: 573 DCYGMHGQLN---DAASLFKQMLDSGIKPNEVTFMNILWA 609
               +H  ++     +S+ +Q+   G   N V   NI  A
Sbjct: 613 GACRVHKNIDLGKQVSSMIQQLGPEGTG-NFVLLSNIFSA 651



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 242/491 (49%), Gaps = 21/491 (4%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+   +LR    +H H    GLH D   ST L++ YA+  S R +  VF      D
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  Y  +  + ++I     M  + A  ++ +  ++L   +  G L  G  VH 
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLV-ALLPLLAQHGALSQGRAVHA 253

Query: 120 RIIK-CGF--DKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
             ++ C     KD V + T++L  Y + G L  A +VF+ M  R+ V+WS+++  +    
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLA---EACGELCSLRPARSIHGHVLRRKIKIDGP 232
            + E   +F  M+ +G+   F++  S+A    AC  L  L   + +H  + +  +  D  
Sbjct: 314 RMLEAFSLFKDMLAQGLC--FLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLT 371

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
            GNS + MY+K G +  A   F ++  + T S++A++S Y ++G   +A   F KM    
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACN 431

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            +P++ T+++++ +C+ L  L+ GK  H  +I +G+  E      ALI+ YA+CG++   
Sbjct: 432 VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICN-ALIDMYAKCGRIDLS 490

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            ++   +  R+I+SWN +I+ Y   G+ KEA  L + M+     PD  +    +SAC + 
Sbjct: 491 RQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHS 550

Query: 413 GSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWN 468
           G +  G     +  H   I  + E     ++D+ ++ GF + AY   + +  K+ V +W 
Sbjct: 551 GLVTEGKRWFHMMAHKYGITPRMEHY-IGMVDLLARGGFLDEAYQFIQGMPLKADVRVWG 609

Query: 469 SMI--CGFYQN 477
           +++  C  ++N
Sbjct: 610 ALLGACRVHKN 620



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 190/396 (47%), Gaps = 14/396 (3%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           T L++ YA+ G L  +  VF+     +   W+ L+  ++      E+  L+  M+ +   
Sbjct: 272 TALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLC 331

Query: 93  -ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
            +S     S LRAC++L DL  G+++H  + K G   D     S+L  Y + G +D A  
Sbjct: 332 FLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATT 391

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +FD+M  +D VS+S++++ Y  N    E  ++F  M    V+PD  TM+SL  AC  L +
Sbjct: 392 LFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAA 451

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L+  +  HG V+ R I  +  + N+ I MY+KCG +  + + F  +  R   SW  MI+ 
Sbjct: 452 LQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAG 511

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS-VHCQIIRKGMGP 330
           Y   G  ++A   F+ M     EP+ +T I ++ +C+  G + EGK   H    + G+ P
Sbjct: 512 YGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITP 571

Query: 331 EYD-YLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISE---YARKGMSKEALE 385
             + Y+G  +++  A  G + E  + I  +  + ++  W  L+     +    + K+   
Sbjct: 572 RMEHYIG--MVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSS 629

Query: 386 LLVQMQTWG-----LMPDSFSVASSLSACGNVGSLQ 416
           ++ Q+   G     L+ + FS A        V  +Q
Sbjct: 630 MIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 665



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 6/235 (2%)

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           CG  +LA  LF++I    +  +N++I  +   G +L              + +  TF   
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++ACS +  L   + VH      G+  D+++ TAL D+YAKC   + A  VF  M  R+V
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK----F 621
           V+W+AM+  Y +HG+ +D  +    M D    PN  T + +L   +  G++ +G+    +
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              A  +   +  +     ++D+ ++ G +  A ++  +M    N   W AL+ G
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAV-RNEVTWSALVGG 308



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 1/136 (0%)

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CGDL  A+ +FD +    +  ++A+I  Y + G                 +PN  TF  +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L ACS    +   +         G+  DL     +VD+ ++      A  +   MP   +
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP-ARD 194

Query: 667 GSIWGALLNGCRIHKR 682
              W A+L G  +H +
Sbjct: 195 VVAWNAMLAGYALHGK 210



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 9/215 (4%)

Query: 3   LFRSCTNLRKLTRL---HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C++L  L      H  ++V G+  +      LI+ YA+ G +  SR +FD     D
Sbjct: 442 LIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARD 501

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK-VH 118
              W  +I  Y  +   +E+  L+  M  +     +  +  ++ ACS  G +  G++  H
Sbjct: 502 IVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFH 561

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADV 177
               K G          ++      G LD+A +    M  + DV  W +++ +   + ++
Sbjct: 562 MMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNI 621

Query: 178 SEGLKMFHSMVRE-GVE--PDFVTMLSLAEACGEL 209
             G K   SM+++ G E   +FV + ++  A G  
Sbjct: 622 DLG-KQVSSMIQQLGPEGTGNFVLLSNIFSAAGRF 655


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 212/682 (31%), Positives = 365/682 (53%), Gaps = 43/682 (6%)

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL---CTYGEFGCLDDARKVFDK 155
           PS L+ C ++ +L   +  H  + K G D D    T ++   C  G    L  A++VF+ 
Sbjct: 36  PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92

Query: 156 MTSRDV-VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
             S      ++S+I  Y  +   +E + +F  M+  G+ PD  T      AC +  +   
Sbjct: 93  SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              IHG +++     D  + NS +  Y++CG+L SA + F ++ +R   SWT+MI  Y R
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212

Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
             + + A++ F +M+  +E  PN +T++ V+ +CA L  L  G+ V+  I   G+    D
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN-D 271

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL++ Y +C  +   +++    G  N+   N + S Y R+G+++EAL +   M   
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLA 452
           G+ PD  S+ S++S+C  + ++  G   HG+V++   +  + + ++LIDMY KC  ++ A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNG--------------------NSL----------- 481
           + +F+R+  K+VV WNS++ G+ +NG                    N++           
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451

Query: 482 EAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           EAI +F  M     +  D VT ++   AC ++G L+  KW+++ +   G++ D+ + T L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DM+++CGD ++A  +F+S++ R+V +W+A I    M G    A  LF  M++ G+KP+ 
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571

Query: 601 VTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           V F+  L ACSH G V++GK  +++ +++ GV P+  HY CMVDLL R+G +E A ++I 
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MP   N  IW +LL  CR+   +++     +++ V      G Y LLSN+YA  G W++
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             KVR  M+  GL+K PG S+I
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSI 713



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 186/671 (27%), Positives = 324/671 (48%), Gaps = 80/671 (11%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--- 60
            ++C  + +L   H  L   GL  D    T+L+    E+G+  S     + F+  +S   
Sbjct: 39  LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            FM+  LI+ Y  +    E+ILL+ +M+    +   + +P  L AC+     G+G ++HG
Sbjct: 99  CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I+K G+ KD  +Q S++  Y E G LD ARKVFD+M+ R+VVSW+S+I  Y       +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218

Query: 180 GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            + +F  MVR E V P+ VTM+ +  AC +L  L     ++  +    I+++  + ++ +
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KC  +  A+R F +          AM S Y R G  ++AL  F  M++    P+ I
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC------------ 346
           ++++ + SC+ L  +  GKS H  ++R G    +D +  ALI+ Y +C            
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDR 397

Query: 347 -------------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                              G++    +    + E+NI+SWN +IS   +  + +EA+E+ 
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 388 VQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHV----IKIDCKDEFVQSSLIDM 442
             MQ+  G+  D  ++ S  SACG++G+L L   I+ ++    I++D +   + ++L+DM
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR---LGTTLVDM 514

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           +S+CG    A  +F  +  + V  W + I      GN+  AI LF  M    L+ D V F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574

Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           + A+ ACS+ G +++GK + + ++  +GV  +        D++  C              
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPE--------DVHYGC-------------- 612

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
                    M+D  G  G L +A  L + M    ++PN+V + ++L AC   G+VE   +
Sbjct: 613 ---------MVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAAY 660

Query: 622 YFNAMRIFGVE 632
               +++   E
Sbjct: 661 AAEKIQVLAPE 671


>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
 gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
          Length = 691

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 215/682 (31%), Positives = 349/682 (51%), Gaps = 11/682 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +  +L     LH+HLL +GL      S  L+  Y+      ++R VFD   +P    W
Sbjct: 14  FGASRSLLAGAHLHSHLLKSGLL--ASYSNHLLSFYSRCRLPSAARAVFDEIPDPCHVSW 71

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           + L+  Y  N    +++  +  M       + +  P VL+ C+   D+  G +VH   + 
Sbjct: 72  SSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK-CAP--DVRFGAQVHALAVA 128

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLK 182
               +D  +  +++  YG FG +D+A+++FD+    R+ VSW+ +I++Y  N    + + 
Sbjct: 129 TRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVG 188

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  MV  G  P+      +  AC         R +HG V+R     D    N+ + MYS
Sbjct: 189 VFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYS 248

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           K GD+  A   F KI      SW A+I+     G   +ALE  ++M  +   PN+ TL +
Sbjct: 249 KLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSS 308

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL +CAG G    G+ +H  +I+     + +++   L++ YA+ G + +  KV   +  R
Sbjct: 309 VLKACAGAGAFNLGRQIHGFMIKADADSD-EFVAVGLVDMYAKDGFLDDARKVFDFMPRR 367

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD--SFSVASSLSACGNVGSLQLGLQ 420
           +++ WN LIS  +  G   E L L  +M+  GL  D    ++A+ L +  ++ ++    Q
Sbjct: 368 DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQ 427

Query: 421 IHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H    KI    D  V + LID Y KCG  + A  +FE      ++   SM+    Q  +
Sbjct: 428 VHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDH 487

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             +AI LF QM    LE D     + + AC+++   E+GK VH  LI      D++   A
Sbjct: 488 GEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNA 547

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L   YAKCG ++ A   F  + E+ VVSWSAMI     HG    A  LF +MLD G+ PN
Sbjct: 548 LVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPN 607

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            +T  ++L AC+H+G V++ K YF +M+  FG++   +HYACM+D+L R+G ++ A +++
Sbjct: 608 NITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELV 667

Query: 659 HSMPFPANGSIWGALLNGCRIH 680
           ++MPF AN ++WGALL   R++
Sbjct: 668 NNMPFQANAAVWGALLGASRLN 689



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 292/579 (50%), Gaps = 8/579 (1%)

Query: 1   MPLFRSCT-NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKEP 58
           +P+   C  ++R   ++HA  + T L  D   +  L+  Y   G +  ++ +FD    E 
Sbjct: 106 LPIVLKCAPDVRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGER 165

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           ++  W  +I  Y+ N+   +++ ++ +M+      + F +  V+ AC+   D  +G +VH
Sbjct: 166 NAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVH 225

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G +++ G+DKD     +++  Y + G ++ A  VF+K+ + DVVSW+++IA    +    
Sbjct: 226 GMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDH 285

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L++   M   GV P+  T+ S+ +AC    +    R IHG +++     D  +    +
Sbjct: 286 RALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLV 345

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE--VKEEPN 296
            MY+K G L  A + F  + +R    W A+IS  +  G   + L  F +M +  +  + N
Sbjct: 346 DMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVN 405

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             TL  VL S A L  +   K VH    + G+  +  ++   LI+ Y +CG++    KV 
Sbjct: 406 RTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSD-SHVVNGLIDSYWKCGRLDYAIKVF 464

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
                 +I+S   +++  ++    ++A++L VQM   GL PDSF ++S L+AC ++ + +
Sbjct: 465 EESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYE 524

Query: 417 LGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G Q+H H+IK     D F  ++L+  Y+KCG    A + F  + +K VV W++MI G  
Sbjct: 525 QGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLA 584

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDI 534
           Q+G+   A+ LFH+M    +  + +T  + + AC++ G ++  K     +  ++G+ +  
Sbjct: 585 QHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTE 644

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
                + D+  + G L+ A  + ++M  + N   W A++
Sbjct: 645 EHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALL 683


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 219/708 (30%), Positives = 373/708 (52%), Gaps = 14/708 (1%)

Query: 43  GSLRSSRL-----VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI 97
           G+  SSRL     +FD   + D   +  L+  +  +   +E+  L+  +      +   I
Sbjct: 40  GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + SVL+  ++L D   G ++H + IK GF  D  + TS++ TY +     D R VFD+M 
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+VV+W+++I+ Y  N+   E L +F  M  EG +P+  T  +      E         
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H  V++  +    P+ NS I +Y KCG++  A   F K E +   +W +MIS Y  +G 
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +AL  F  M       +  +  +++  CA L  LR  + +HC +++ G   + + +  
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN-IRT 338

Query: 338 ALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
           AL+  Y++C  M +  ++    G   N++SW  +IS + +    +EA+ L  +M+  G+ 
Sbjct: 339 ALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVR 398

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLL 455
           P+ F+ +  L+A   +   +    +H  V+K +  +   V ++L+D Y K G  + A  +
Sbjct: 399 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKV 454

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS-NIGQ 514
           F  I  K +V W++M+ G+ Q G +  AI +F ++    ++ +E TF + +  C+     
Sbjct: 455 FSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTAS 514

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           + +GK  H   I   +   + + +AL  MYAK G +++A+ VF    E+++VSW++MI  
Sbjct: 515 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISG 574

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
           Y  HGQ   A  +FK+M    +K + VTF+ +  AC+H+G VEEG+ YF+ M R   + P
Sbjct: 575 YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 634

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             +H +CMVDL SR+G +E A K+I +MP  A  +IW  +L  CR+HK+ ++ +   +++
Sbjct: 635 TKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKI 694

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 D+  Y LLSN+YAE G+W E  KVR +M    +KK PGYS I
Sbjct: 695 IAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 742



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 281/550 (51%), Gaps = 9/550 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH   +  G   D    T L+++Y +  + +  R VFD  KE +   W  LI  Y  N+
Sbjct: 118 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNS 177

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE + L+ +M  E    ++F + + L   +  G  G G +VH  ++K G DK   +  
Sbjct: 178 LNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 237

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y + G +  AR +FDK   + VV+W+S+I+ Y  N    E L MF+SM    V  
Sbjct: 238 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRL 297

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              +  S+ + C  L  LR    +H  V++     D  +  + +V YSKC  +L A R F
Sbjct: 298 SESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLF 357

Query: 255 VKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
            +        SWTAMIS + ++   ++A+  F +M      PN  T   +L +   +   
Sbjct: 358 KETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVIS-- 415

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
                VH Q+++         +G AL++ Y + GK+ E  KV   I  ++I++W+ +++ 
Sbjct: 416 --PSEVHAQVVKTNY-ERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAG 472

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC-GNVGSLQLGLQIHGHVIKIDCKD 432
           YA+ G ++ A+++  ++   G+ P+ F+ +S L+ C     S+  G Q HG  IK     
Sbjct: 473 YAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDS 532

Query: 433 EF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
              V S+L+ MY+K G    A  +F+R ++K +V WNSMI G+ Q+G +++A+++F +M 
Sbjct: 533 SLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 592

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
              ++MD VTF+    AC++ G +E+G K+    +    +      ++ + D+Y++ G L
Sbjct: 593 KRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 652

Query: 551 QTAQRVFDSM 560
           + A +V D+M
Sbjct: 653 EKAMKVIDNM 662



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 42/355 (11%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           + +HA ++ T         T L+++Y ++G +  +  VF      D   W+ ++  Y   
Sbjct: 417 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQA 476

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRAC-SSLGDLGSGEKVHGRIIKCGFDKDDVI 132
              E +I ++ ++ +     + F + S+L  C ++   +G G++ HG  IK   D    +
Sbjct: 477 GETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCV 536

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            +++L  Y + G ++ A +VF +   +D+VSW+S+I+ Y  +    + L +F  M +  V
Sbjct: 537 SSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 596

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           + D VT + +  AC            H  ++    K        F +M   C    + E 
Sbjct: 597 KMDSVTFIGVFAAC-----------THAGLVEEGEKY-------FDIMVRDCKIAPTKEH 638

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI---TVLGSCAG 309
                        + M+  Y+R+G  +KA++    M      PNL       T+L +C  
Sbjct: 639 N------------SCMVDLYSRAGQLEKAMKVIDNM------PNLAGSTIWRTILAACRV 680

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
                 G+    +II   M PE       L   YAE G   E  KV   + ERN+
Sbjct: 681 HKKTELGRLAAEKII--AMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 733


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/635 (32%), Positives = 348/635 (54%), Gaps = 6/635 (0%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L  G+ +H +IIK        I  S++  Y +   L +A+ VF+++ ++DVVSW+ II  
Sbjct: 22  LQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80

Query: 171 YFDN--ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
           Y  +  +  S  +++F  M  E   P+  T   +  A   L      R  H   ++    
Sbjct: 81  YSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSC 140

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            D  +G+S + MY K G    A + F  + +R + SW  MIS Y       +AL  F  M
Sbjct: 141 RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
              +E  N     +VL +      +  GK +HC  ++ G+      +G AL+  YA+CG 
Sbjct: 201 RREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGL-LSIVSVGNALVTMYAKCGS 259

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           + +  +      ++N ++W+ +I+ YA+ G S +AL+L   M   G+ P  F+    ++A
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C ++G+   G Q+H +++K+  + + +V ++L+DMY+KC     A   F+ +Q+  +V+W
Sbjct: 320 CSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLW 379

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
            SMI G+ QNG + +A++L+ +M +  +  +E+T  + ++ACS++  LE+GK +H + + 
Sbjct: 380 TSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
           YG   ++ I +AL+ MYAKCG L+    VF  M  R+V+SW+AMI     +G   +A  L
Sbjct: 440 YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALEL 499

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLS 646
           F++M   G KP+ VTF+NIL ACSH G VE G  YF  M   FG++P ++HYACMVD+LS
Sbjct: 500 FEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILS 559

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R+G ++ A +   S        +W  +L  CR ++  ++     ++L   G+ ++  Y L
Sbjct: 560 RAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVL 619

Query: 707 LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           LS+IY+  G W++  +VR +M++ G+ K PG S I
Sbjct: 620 LSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWI 654



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/550 (29%), Positives = 282/550 (51%), Gaps = 8/550 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L+K   LHA ++ +       A++ L+  YA+   LR ++ VF+  +  D   W  +I 
Sbjct: 21  SLQKGKALHAQIIKSSSSCVYIANS-LVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79

Query: 69  CYMWNNFFEES--ILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
            Y  +     S  + L+ +M  E    +   +  V  A S+L D   G   H   IK   
Sbjct: 80  GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
            +D  + +S++  Y + G   +ARKVFD M  R+ VSW+++I+ Y      +E L +F  
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M RE    +     S+  A      +   + IH   ++  +     +GN+ + MY+KCG 
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  A +TF     + + +W+AMI+ Y +SG   KAL+ F  M      P+  T + V+ +
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C+ LG   EGK VH  +++ G   +  Y+  AL++ YA+C  + +  K    + E +I+ 
Sbjct: 320 CSDLGAAWEGKQVHDYLLKLGFESQI-YVMTALVDMYAKCSSIVDARKGFDYLQEPDIVL 378

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  +I  Y + G +++AL L  +M+  G++P+  ++AS L AC ++ +L+ G QIH   +
Sbjct: 379 WTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438

Query: 427 KIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K     E  + S+L  MY+KCG      L+F R+  + V+ WN+MI G  QNG   EA+ 
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALE 498

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTALTDM 543
           LF +M L   + D VTF+  + ACS++G +E+G W + +++   +G+   +     + D+
Sbjct: 499 LFEEMQLEGTKPDYVTFVNILSACSHMGLVERG-WGYFRMMFDEFGMDPRVEHYACMVDI 557

Query: 544 YAKCGDLQTA 553
            ++ G L+ A
Sbjct: 558 LSRAGKLKEA 567



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 147/475 (30%), Positives = 239/475 (50%), Gaps = 11/475 (2%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           SL+  +++H  +++        + NS + +Y+KC  L  A+  F +I+ +   SW  +I+
Sbjct: 21  SLQKGKALHAQIIKSSSSCV-YIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79

Query: 271 CYNRSG--WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
            Y++ G       +E F +M      PN  T   V  + + L     G+  H   I+  M
Sbjct: 80  GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIK--M 137

Query: 329 GPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
               D ++G +L+  Y + G   E  KV   + ERN +SW  +IS YA + ++ EAL L 
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKC 446
             M+      + F   S LSA      +  G QIH   +K        V ++L+ MY+KC
Sbjct: 198 RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  + A   FE    K+ + W++MI G+ Q+G+S +A+ LF  M+L+ +   E TF+  I
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            ACS++G   +GK VH  L+  G    IY+ TAL DMYAKC  +  A++ FD + E ++V
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIV 377

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
            W++MI  Y  +G+  DA SL+ +M   GI PNE+T  ++L ACS   ++E+GK      
Sbjct: 378 LWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHART 437

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP----FPANGSIWGALLNGC 677
             +G   ++   + +  + ++ G ++    +   MP       N  I G   NGC
Sbjct: 438 VKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGC 492



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 273/596 (45%), Gaps = 58/596 (9%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    + L+  Y + G    +R VFDT  E +S  WA +I  Y       E++ L+  M 
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           RE+   + F++ SVL A +    + +G+++H   +K G      +  +++  Y + G LD
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD 261

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA + F+  + ++ ++WS++I  Y  + D  + LK+F SM   G+ P   T + +  AC 
Sbjct: 262 DALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACS 321

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           +L +    + +H ++L+   +    +  + + MY+KC  ++ A + F  +++     WT+
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTS 381

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  Y ++G  + AL  + +M      PN +T+ +VL +C+ L  L +GK +H + ++ G
Sbjct: 382 MIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYG 441

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
            G E   +G AL   YA+CG + +   V   +  R+++SWN +IS  ++ G  KEALEL 
Sbjct: 442 FGLEVP-IGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELF 500

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            +MQ  G  PD  +  + LSAC ++G ++ G      +      DEF     ++ Y+   
Sbjct: 501 EEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMF-----DEFGMDPRVEHYA--- 552

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN---CLEMDEVTFLT 504
                                 M+    + G   EAI       ++   CL      +  
Sbjct: 553 ---------------------CMVDILSRAGKLKEAIEFTESATIDHGMCL------WRI 585

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRK-DIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
            + AC N    E G +   KL+  G ++   Y+   L+ +Y+  G  +  +RV   M  R
Sbjct: 586 ILGACRNYRNYELGAYAGEKLMELGSQESSAYV--LLSSIYSALGRWEDVERVRRMMKLR 643

Query: 564 NV-----VSW-------SAMIDCYGMHGQLNDA----ASLFKQMLDSGIKPNEVTF 603
            V      SW          +    MH Q+ D       L KQM D G +P   +F
Sbjct: 644 GVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDSF 699



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 3/283 (1%)

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           +P + S  ++L    +  SLQ G  +H  +IK      ++ +SL+++Y+KC     A  +
Sbjct: 3   LPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 456 FERIQQKSVVMWNSMICGFYQNG--NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           FERIQ K VV WN +I G+ Q+G   S   + LF +M       +  TF     A S + 
Sbjct: 63  FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
               G+  H   I     +D+++ ++L +MY K G    A++VFD+M ERN VSW+ MI 
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMIS 182

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y       +A  LF+ M       NE  F ++L A +    V  GK         G+  
Sbjct: 183 GYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLS 242

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            +     +V + ++ G ++ A +   +     N   W A++ G
Sbjct: 243 IVSVGNALVTMYAKCGSLDDALQTFETSS-DKNSITWSAMITG 284



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C++L  L    ++HA  +  G   + P  + L   YA+ G L+   LVF      D
Sbjct: 417 VLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
              W  +I     N   +E++ L+ +M  E        + ++L ACS +G
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 205/655 (31%), Positives = 352/655 (53%), Gaps = 13/655 (1%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDDVIQTSILCT-YGEFGCLDDAR 150
           + +F     L+ C + GD   G  VHG +++  G  + D+   ++L   YG+ G L  AR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACG 207
           ++FD+M  R++VS+ +++ ++    D      +F  +  EG E +     TML LA A  
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA-- 174

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            + +   A  +H    +     +  +G+  I  YS C  +  AE  F  I ++    WTA
Sbjct: 175 -MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-CQIIRK 326
           M+SCY+ +   + A   F KM     +PN   L +VL +   L  +  GK +H C I  K
Sbjct: 234 MVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAI--K 291

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
            +     ++G AL++ YA+CG + +       I   +++  + +IS YA+   +++A EL
Sbjct: 292 TLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 351

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
            +++    ++P+ +S++S L AC N+  L  G QIH H IKI  + D FV ++L+D Y+K
Sbjct: 352 FLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAK 411

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C   + +  +F  ++  + V WN+++ GF Q+G   EA+++F +M    +   +VT+ + 
Sbjct: 412 CNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSV 471

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++AC++   +     +H  +       D  I  +L D YAKCG ++ A +VF  + ER++
Sbjct: 472 LRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 531

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW+A+I  Y +HGQ  DA  LF +M  S ++ N++TF+ +L  CS +G V  G   F++
Sbjct: 532 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591

Query: 626 MRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           MRI  G++P ++HY C+V LL R+G +  A + I  +P   +  +W ALL+ C IHK + 
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 651

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + +   +++      D   Y LLSN+YA  G+ D+   +R  M   G++KVPG S
Sbjct: 652 LGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 706



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/603 (25%), Positives = 307/603 (50%), Gaps = 9/603 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y ++G L S+R +FD   E +   +  L++ +     FE +  L+ ++  E   ++
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F+  ++L+   ++   G    VH    K G D +  + + ++  Y     + DA  VF+
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            +  +D V W+++++ Y +N       ++F  M   G +P+   + S+ +A   L S+  
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IHG  ++     +  +G + + MY+KCGD+  A   F  I        + MIS Y +
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD- 333
           S   ++A E F++++     PN  +L +VL +C  +  L  GK +H   I+  +G E D 
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK--IGHESDL 399

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++G AL++FYA+C  M    K+  ++ + N +SWN ++  +++ G+ +EAL +  +MQ  
Sbjct: 400 FVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA 459

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLA 452
            +     + +S L AC +  S++   QIH  + K     D  + +SLID Y+KCG+   A
Sbjct: 460 QMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ + ++ ++ WN++I G+  +G + +A+ LF +M  + +E +++TF+  +  CS+ 
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579

Query: 513 GQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTA-QRVFDSMSERNVVSWSA 570
           G +  G  +   + I +G++  +   T +  +  + G L  A Q + D  S  + + W A
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           ++    +H  +       +++L+  I+P +E T++ +    + +GS+++      +MR  
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILE--IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNI 697

Query: 630 GVE 632
           GV 
Sbjct: 698 GVR 700



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 241/507 (47%), Gaps = 17/507 (3%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           LI++Y+    +  +  VF+     D+ +W  ++ CY  N+  E +  ++ KM       +
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F   SVL+A   L  +  G+ +HG  IK   D +  +  ++L  Y + G + DAR  F+
Sbjct: 263 PFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE 322

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            +   DV+  S +I+ Y  +    +  ++F  ++R  V P+  ++ S+ +AC  +  L  
Sbjct: 323 MIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDF 382

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IH H ++   + D  +GN+ +  Y+KC D+ S+ + F  +      SW  ++  +++
Sbjct: 383 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ 442

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           SG  ++AL  F +M   +     +T  +VL +CA    +R    +HC I +     +   
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND-TV 501

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G +LI+ YA+CG + +  KV   + ER+I+SWN +IS YA  G + +ALEL  +M    
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIH-----GHVIKIDCKDEFVQSSLIDMYSKCGFK 449
           +  +  +  + LS C + G +  GL +       H IK   +     + ++ +  + G  
Sbjct: 562 VESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEH---YTCIVRLLGRAGRL 618

Query: 450 NLAYLLFERIQQ-KSVVMWNSMI--CGFYQNGNSLEAINLFH-QMYLNCLEMDEVTFLTA 505
           N A      I    S ++W +++  C  ++N     A+  F  +  L     DE T++  
Sbjct: 619 NDALQFIGDIPSAPSAMVWRALLSSCIIHKN----VALGRFSAEKILEIEPQDETTYVLL 674

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRK 532
               +  G L++   +   + + GVRK
Sbjct: 675 SNMYAAAGSLDQVALLRKSMRNIGVRK 701



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 188/389 (48%), Gaps = 11/389 (2%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           +P     L++ YA+ G ++ +RL F+     D  + + +I  Y  +N  E++  L+ +++
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 356

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R     + +   SVL+AC+++  L  G+++H   IK G + D  +  +++  Y +   +D
Sbjct: 357 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
            + K+F  +   + VSW++I+  +  +    E L +F  M    +    VT  S+  AC 
Sbjct: 417 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 476

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
              S+R A  IH  + +     D  +GNS I  Y+KCG +  A + F  + +R   SW A
Sbjct: 477 STASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNA 536

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI-IRK 326
           +IS Y   G    ALE F +M +   E N IT + +L  C+  G +  G S+   + I  
Sbjct: 537 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDH 596

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNILSWNMLISE---YARKGMSKE 382
           G+ P  ++    ++      G++++  + I  I    + + W  L+S    +    + + 
Sbjct: 597 GIKPSMEHY-TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 655

Query: 383 ALELLVQMQ-----TWGLMPDSFSVASSL 406
           + E +++++     T+ L+ + ++ A SL
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAAAGSL 684



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 165/373 (44%), Gaps = 43/373 (11%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CTN+ +L    ++H H +  G   D      L++ YA+   + SS  +F + ++ +
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 429

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  +  +   EE++ ++ +M   Q   +   Y SVLRAC+S   +    ++H 
Sbjct: 430 EVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 489

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K  F+ D VI  S++ TY + G + DA KVF  +  RD++SW++II+ Y  +   ++
Sbjct: 490 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 549

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M +  VE + +T ++L   C     +      HG  L   ++ID  +      
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVCSSTGLVN-----HGLSLFDSMRIDHGI------ 598

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                              K     +T ++    R+G    AL+ F+   ++   P+ + 
Sbjct: 599 -------------------KPSMEHYTCIVRLLGRAGRLNDALQ-FIG--DIPSAPSAMV 636

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC---EKVI 356
              +L SC     +  G+    +I+      E  Y+   L   YA  G + +     K +
Sbjct: 637 WRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYV--LLSNMYAAAGSLDQVALLRKSM 694

Query: 357 HAIGERNI--LSW 367
             IG R +  LSW
Sbjct: 695 RNIGVRKVPGLSW 707


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 212/682 (31%), Positives = 365/682 (53%), Gaps = 43/682 (6%)

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL---CTYGEFGCLDDARKVFDK 155
           PS L+ C ++ +L   +  H  + K G D D    T ++   C  G    L  A++VF+ 
Sbjct: 36  PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92

Query: 156 MTSRDV-VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
             S      ++S+I  Y  +   +E + +F  M+  G+ PD  T      AC +  +   
Sbjct: 93  SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              IHG +++     D  + NS +  Y++CG+L SA + F ++ +R   SWT+MI  Y R
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212

Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
             + + A++ F +M+  +E  PN +T++ V+ +CA L  L  G+ V+  I   G+    D
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN-D 271

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL++ Y +C  +   +++    G  N+   N + S Y R+G+++EAL +   M   
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLA 452
           G+ PD  S+ S++S+C  + ++  G   HG+V++   +  + + ++LIDMY KC  ++ A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNG--------------------NSL----------- 481
           + +F+R+  K+VV WNS++ G+ +NG                    N++           
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451

Query: 482 EAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           EAI +F  M     +  D VT ++   AC ++G L+  KW+++ +   G++ D+ + T L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DM+++CGD ++A  +F+S++ R+V +W+A I    M G    A  LF  M++ G+KP+ 
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571

Query: 601 VTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           V F+  L ACSH G V++GK  +++ +++ GV P+  HY CMVDLL R+G +E A ++I 
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MP   N  IW +LL  CR+   +++     +++ V      G Y LLSN+YA  G W++
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             KVR  M+  GL+K PG S+I
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSI 713



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 186/671 (27%), Positives = 324/671 (48%), Gaps = 80/671 (11%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--- 60
            ++C  + +L   H  L   GL  D    T+L+    E+G+  S     + F+  +S   
Sbjct: 39  LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98

Query: 61  -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            FM+  LI+ Y  +    E+ILL+ +M+    +   + +P  L AC+     G+G ++HG
Sbjct: 99  CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I+K G+ KD  +Q S++  Y E G LD ARKVFD+M+ R+VVSW+S+I  Y       +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218

Query: 180 GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            + +F  MVR E V P+ VTM+ +  AC +L  L     ++  +    I+++  + ++ +
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KC  +  A+R F +          AM S Y R G  ++AL  F  M++    P+ I
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC------------ 346
           ++++ + SC+ L  +  GKS H  ++R G    +D +  ALI+ Y +C            
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDR 397

Query: 347 -------------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                              G++    +    + E+NI+SWN +IS   +  + +EA+E+ 
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 388 VQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHV----IKIDCKDEFVQSSLIDM 442
             MQ+  G+  D  ++ S  SACG++G+L L   I+ ++    I++D +   + ++L+DM
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR---LGTTLVDM 514

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           +S+CG    A  +F  +  + V  W + I      GN+  AI LF  M    L+ D V F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574

Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           + A+ ACS+ G +++GK + + ++  +GV  +        D++  C              
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPE--------DVHYGC-------------- 612

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
                    M+D  G  G L +A  L + M    ++PN+V + ++L AC   G+VE   +
Sbjct: 613 ---------MVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAAY 660

Query: 622 YFNAMRIFGVE 632
               +++   E
Sbjct: 661 AAEKIQVLAPE 671


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 216/678 (31%), Positives = 348/678 (51%), Gaps = 53/678 (7%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
            R C     + + + +H  IIK GF     I  +++  Y +   + DAR +FD+M  R++
Sbjct: 10  FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPARSIHG 220
           VSW+++++   +++   E L +++ M+   +E P+     ++ +ACG + ++   + +H 
Sbjct: 70  VSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHY 129

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
           H+ + K+ +D  L N+ + MY KCG L  A+R F +I  +  TSW  +I  Y + G    
Sbjct: 130 HIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDD 189

Query: 281 ALESFVKMLEVKEEPNLI----------------------------------TLITVLGS 306
           A++ F KM     EP+++                                  T  +VL +
Sbjct: 190 AMKLFDKM----PEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKA 245

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C     L  G+ +HC II+ G      Y   ALI+ Y+ C  +SE  K+       + +S
Sbjct: 246 CGCSDELMLGREIHCYIIKSGFESSC-YCISALIDMYSSCKLLSEATKIFDQYFRNSSVS 304

Query: 367 -----WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
                WN ++S +   G   EAL ++  M   G+  D ++ +  L  C N  +L L  Q+
Sbjct: 305 ESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQV 364

Query: 422 HGHVI----KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           HG VI    ++DC    V S LID+Y+K G  N A  LFER+  K VV W+S+I G  + 
Sbjct: 365 HGFVITSGYELDC---VVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARF 421

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G+   A +LF  M    L++D       ++ACS++   + GK VH   +  G   +  + 
Sbjct: 422 GSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVT 481

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           TAL DMYAKCGD++ A  +F  +SE + +SW+++I     +G+  +A SL  +M++SG K
Sbjct: 482 TALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTK 541

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PN++T + +L AC HSG VEE    FN++    G+ P  +HY CMVD+L ++G  E A K
Sbjct: 542 PNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVK 601

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           +I  MPF  + +IW +LL  C  +K  D+   + + L  T   D   Y +LSN+YA  G 
Sbjct: 602 LISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGM 661

Query: 717 WDEFGKVRSIMEVTGLKK 734
           WD   KVR  ++  G K+
Sbjct: 662 WDSVSKVRETVKKIGKKR 679



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 174/649 (26%), Positives = 293/649 (45%), Gaps = 78/649 (12%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           FR C   R +     LH+H++ +G          +I  Y++  S+  +R +FD     + 
Sbjct: 10  FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
             W  ++     ++   E++ LY++MI  +    N F+Y +VL+AC  + ++  G+ VH 
Sbjct: 70  VSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHY 129

Query: 120 RIIKCGFDKDDVIQTSIL--------------------CT-----------YGEFGCLDD 148
            I +   D D V+  ++L                    C            Y + G +DD
Sbjct: 130 HIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDD 189

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A K+FDKM   D+VSW+SIIA   DNA  S  L+    M  +G++ D  T  S+ +ACG 
Sbjct: 190 AMKLFDKMPEPDIVSWNSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGC 248

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS---- 264
              L   R IH ++++   +      ++ I MYS C  L  A + F +  +  + S    
Sbjct: 249 SDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLA 308

Query: 265 -WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
            W +M+S +  +G + +AL     M       +  T   VL  C     L     VH  +
Sbjct: 309 LWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV 368

Query: 324 IRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I  G   E D  +G  LI+ YA+ G ++   ++   + ++++++W+ LI+  AR G  K 
Sbjct: 369 ITSGY--ELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKL 426

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLID 441
           A  L + M   GL  D F ++  L AC ++ S Q G Q+H   +K   + E  V ++LID
Sbjct: 427 AFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALID 486

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY+KCG    A  LF  + +   + W S+I G  QNG + EAI+L H+M  +  + +++T
Sbjct: 487 MYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKIT 546

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            L  + AC + G +E+  W            D++           C +            
Sbjct: 547 ILGVLTACRHSGLVEEA-W------------DVFNSIETNHGLIPCPE------------ 581

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
                 ++ M+D  G  G+  +A  L  +M     KP++  + ++L AC
Sbjct: 582 -----HYNCMVDILGQAGRFEEAVKLISEM---PFKPDKTIWSSLLGAC 622



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 234/489 (47%), Gaps = 20/489 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + ++  C +LR   R+   +       +  +   LI  YA+ G +  +  +FD   EPD 
Sbjct: 147 LDMYVKCGSLRDAQRVFCEIPCK----NATSWNTLILGYAKQGLIDDAMKLFDKMPEPDI 202

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I   + +N    ++     M  +   +  F +PSVL+AC    +L  G ++H  
Sbjct: 203 VSWNSIIAGLV-DNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCY 261

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS-----WSSIIASYFDNA 175
           IIK GF+      ++++  Y     L +A K+FD+      VS     W+S+++ +  N 
Sbjct: 262 IIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNG 321

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D  E L M   M R GV  DF T   + + C    +L  A  +HG V+    ++D  +G+
Sbjct: 322 DYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGS 381

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             I +Y+K G + +A R F ++  +   +W+++I+   R G  + A   F+ M+ +  + 
Sbjct: 382 ILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQI 441

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +   +  VL +C+ L   + GK VH   ++KG   E   +  ALI+ YA+CG + +   +
Sbjct: 442 DHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESE-GVVTTALIDMYAKCGDIEDALSL 500

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              + E + +SW  +I   A+ G ++EA+ LL +M   G  P+  ++   L+AC + G +
Sbjct: 501 FGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLV 560

Query: 416 QLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSM 470
           +    +   +      I C + +  + ++D+  + G F+    L+ E   +    +W+S+
Sbjct: 561 EEAWDVFNSIETNHGLIPCPEHY--NCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSL 618

Query: 471 I--CGFYQN 477
           +  CG Y+N
Sbjct: 619 LGACGTYKN 627



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 203/448 (45%), Gaps = 42/448 (9%)

Query: 7   CTNLRKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF---- 61
           C++   L R +H +++ +G        + LI+ Y+    L  +  +FD +    S     
Sbjct: 248 CSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESL 307

Query: 62  -MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +W  ++  ++ N  + E++ +   M R       + +  VL+ C +  +L    +VHG 
Sbjct: 308 ALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGF 367

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I  G++ D V+ + ++  Y + G +++A ++F+++  +DVV+WSS+I            
Sbjct: 368 VITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLA 427

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
             +F  M+  G++ D   +  + +AC  L S +  + +H   L++  + +G +  + I M
Sbjct: 428 FSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDM 487

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCGD+  A   F  + +  T SWT++I    ++G  ++A+    KM+E   +PN IT+
Sbjct: 488 YAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITI 547

Query: 301 ITVLGSCAGLGWLREGKSVHCQI-IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + VL +C   G + E   V   I    G+ P  ++                         
Sbjct: 548 LGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEH------------------------- 582

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                  +N ++    + G  +EA++L+ +M      PD    +S L ACG   +  L  
Sbjct: 583 -------YNCMVDILGQAGRFEEAVKLISEMP---FKPDKTIWSSLLGACGTYKNRDLAN 632

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            +  H++    +D  V   L ++Y+  G
Sbjct: 633 IVAEHLLATSPEDVSVYIMLSNVYAALG 660



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 3/197 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD      A + C     ++  K +H  +I  G    I+I   +  +Y+KC  +  A+ +
Sbjct: 1   MDLNHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNM 60

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI-KPNEVTFMNILWACSHSGS 615
           FD M  RN+VSW+ M+         ++A SL+ +M++S I +PN+  +  +L AC    +
Sbjct: 61  FDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRN 120

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           VE GK     +    ++ D+     ++D+  + G +  A ++   +P   N + W  L+ 
Sbjct: 121 VELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCK-NATSWNTLIL 179

Query: 676 GCRIHKRI-DVMKTIEK 691
           G      I D MK  +K
Sbjct: 180 GYAKQGLIDDAMKLFDK 196


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 198/608 (32%), Positives = 332/608 (54%), Gaps = 18/608 (2%)

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA+  FD +  R++ SW+ ++A++  +    E L+    M ++GV PD VT ++   +CG
Sbjct: 10  DAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 69

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK-RCTTSWT 266
           +  SLR    IH  V+  +++ID  + N+ + MY KCG L  A+R F K+E+ R   SW+
Sbjct: 70  DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS 129

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
            M   +   G   +AL  F  ML +  +     ++T+L +C+    +++G+ +H  I   
Sbjct: 130 IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALS 189

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE--RNILSWNMLISEYARKGMSKEAL 384
           G   E   +  A++  Y  CG + E  KV  A+ E  R+++SWN+++S Y      K+A+
Sbjct: 190 GFESEL-LVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAI 248

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMY 443
           +L  +MQ   L PD  +  S LSAC +   + LG  +H  ++  +  K+  V ++L+ MY
Sbjct: 249 QLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMY 305

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-------LNCLE 496
           +KCG    A  +F++++Q+S++ W ++I  + +     EA +LF QM           ++
Sbjct: 306 AKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVK 365

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D + F+T + AC+++  LE+GK V  +  S G+  D  + TA+ ++Y KCG+++ A+R+
Sbjct: 366 PDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRI 425

Query: 557 FDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           FD++  R +V  W+AMI  Y   GQ ++A  LF +M   G++P+  +F++IL ACSH+G 
Sbjct: 426 FDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGL 485

Query: 616 VEEGKFYFNAMRI--FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            ++GK YF +M      V   +QH+ C+ DLL R G ++ A + +  +P   +   W +L
Sbjct: 486 EDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSL 545

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L  CR H+ +   K +  +L          Y  LSNIYAE   W    KVR  M   G+K
Sbjct: 546 LAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVK 605

Query: 734 KVPGYSTI 741
           K  G STI
Sbjct: 606 KERGVSTI 613



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 280/569 (49%), Gaps = 49/569 (8%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM-WAVLI 67
           +LR   R+H  ++ + L  DP  S  L+  Y + GSL  ++ VF   +   + + W+++ 
Sbjct: 73  SLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMA 132

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             +  +    E++  +  M+      +     ++L ACSS   +  G  +H  I   GF+
Sbjct: 133 GAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFE 192

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVVSWSSIIASYFDNADVSEGLKMFH 185
            + ++  +++  YG  G +++ARKVFD M    RDVVSW+ ++++Y  N    + ++++ 
Sbjct: 193 SELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQ 252

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M    + PD VT +SL  AC     +   R +H  ++  +++ +  +GN+ + MY+KCG
Sbjct: 253 RM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCG 309

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-------EPNLI 298
               A   F K+E+R   SWT +IS Y R     +A   F +MLE+++       +P+ +
Sbjct: 310 SHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 369

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
             +T+L +CA +  L +GK V  Q    G+  +   +G A++  Y +CG++ E  ++  A
Sbjct: 370 AFVTILNACADVSALEQGKMVSEQAASCGLSSD-KAVGTAVVNLYGKCGEIEEARRIFDA 428

Query: 359 IGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  R ++  WN +I+ YA+ G S EAL+L  +M+  G+ PDSFS  S L AC +      
Sbjct: 429 VCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHT----- 483

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           GL+  G            +S    M ++  ++N+          +++  +  +     + 
Sbjct: 484 GLEDQG------------KSYFTSMTTE--YRNVT---------RTIQHFGCVADLLGRG 520

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR-KDIYI 536
           G   EA     ++    ++ D V + + + AC N   L++ K V +KL+    R    Y+
Sbjct: 521 GRLKEAEEFLEKLP---VKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYV 577

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNV 565
             AL+++YA+        +V   M+E+ V
Sbjct: 578 --ALSNIYAELQKWHAVAKVRKFMAEQGV 604



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 144/607 (23%), Positives = 289/607 (47%), Gaps = 50/607 (8%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           YA   S   ++  FD  ++ + + W  L+  +  +   +E++    +M ++        +
Sbjct: 2   YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM-T 157
            + L +C     L  G ++H  ++    + D  +  ++L  Y + G L  A++VF KM  
Sbjct: 62  ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +R+V+SWS +  ++  + +V E L+ F  M+  G++     M+++  AC     ++  R 
Sbjct: 122 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRM 181

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRS 275
           IH  +     + +  + N+ + MY +CG +  A + F  +++  R   SW  M+S Y  +
Sbjct: 182 IHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHN 241

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
              + A++ + +M   +  P+ +T +++L +C+    +  G+ +H QI+   +      +
Sbjct: 242 DRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV-IV 297

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM----- 390
           G AL+  YA+CG  +E   V   + +R+I+SW  +IS Y R+ +  EA  L  QM     
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357

Query: 391 --QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCG 447
              +  + PD+ +  + L+AC +V +L+ G  +           D+ V ++++++Y KCG
Sbjct: 358 NGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCG 417

Query: 448 FKNLAYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
               A  +F+ +  +  V +WN+MI  + Q G S EA+ LF +M +  +  D  +F++ +
Sbjct: 418 EIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSIL 477

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            ACS+ G  ++GK       SY         T++T  Y                  R + 
Sbjct: 478 LACSHTGLEDQGK-------SYF--------TSMTTEYRNV--------------TRTIQ 508

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
            +  + D  G  G+L +A    +++    +KP+ V + ++L AC +   ++  K   N  
Sbjct: 509 HFGCVADLLGRGGRLKEAEEFLEKL---PVKPDAVAWTSLLAACRNHRDLKRAKEVAN-- 563

Query: 627 RIFGVEP 633
           ++  +EP
Sbjct: 564 KLLRLEP 570



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 232/448 (51%), Gaps = 19/448 (4%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+ C     A+  F  +E+R   SWT +++ +  SG  ++ L +  +M +    P+ +T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQII--RKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            IT LGSC     LR+G  +H  ++  R  + P+   +  AL+  Y +CG +S  ++V  
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPK---VSNALLNMYKKCGSLSHAKRVFA 117

Query: 358 AIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
            +   RN++SW+++   +A  G   EAL     M   G+     ++ + LSAC +   +Q
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177

Query: 417 LGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICG 473
            G  IH  +     + E  V ++++ MY +CG    A  +F+ + +  + VV WN M+  
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           +  N    +AI L+ +M L     D+VT+++ + ACS+   +  G+ +H ++++  + K+
Sbjct: 238 YVHNDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 294

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + +  AL  MYAKCG    A+ VFD M +R+++SW+ +I  Y     + +A  LF+QML+
Sbjct: 295 VIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE 354

Query: 594 -------SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
                    +KP+ + F+ IL AC+   ++E+GK         G+  D      +V+L  
Sbjct: 355 LEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYG 414

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALL 674
           + G+IE A ++  ++    +  +W A++
Sbjct: 415 KCGEIEEARRIFDAVCSRPDVQLWNAMI 442


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 203/635 (31%), Positives = 335/635 (52%), Gaps = 20/635 (3%)

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
           +L   +++HG  IK   +    +  + L +Y                 S +    S +I 
Sbjct: 55  NLNETQQLHGHFIKTSSNCSYRVPLAALESY-----------------SSNAAIHSFLIT 97

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
           SY  N   ++  K++  M     E D   + S+ +AC  + S    + +HG V++     
Sbjct: 98  SYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHG 157

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           D  + N+ I+MYS+ G L  A   F KIE +   SW+ MI  Y+RSG   +AL+    M 
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM-GPEYDYLGPALIEFYAECGK 348
            ++ +P+ I +I++    A L  L+ GK++H  ++R G  G     L  ALI+ Y +C  
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           ++   +V   + + +I+SW  +I+ Y       E + L V+M   G+ P+  ++ S +  
Sbjct: 278 LAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKE 337

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           CG  G+L+LG  +H   ++       V  ++ IDMY KCG    A  +F+  + K ++MW
Sbjct: 338 CGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMW 397

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           ++MI  + QN    EA ++F  M    +  +E T ++ +  C+  G LE GKW+H  +  
Sbjct: 398 SAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDK 457

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            G++ D+ + T+  DMYA CGD+ TA R+F   ++R++  W+AMI  + MHG    A  L
Sbjct: 458 QGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALEL 517

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLS 646
           F++M   G+ PN++TF+  L ACSHSG ++EGK  F+ M   FG  P ++HY CMVDLL 
Sbjct: 518 FEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLG 577

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R+G ++ A ++I SMP   N +++G+ L  C++HK I + +   K+      + +GY  L
Sbjct: 578 RAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVL 637

Query: 707 LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +SNIYA    W +   +R  M+  G+ K PG S+I
Sbjct: 638 MSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSI 672



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 177/589 (30%), Positives = 292/589 (49%), Gaps = 23/589 (3%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL +  +LH H + T  +         +ESY+   ++ S                  LI 
Sbjct: 55  NLNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAIHS-----------------FLIT 97

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y+ NN   ++  +Y  M      + NF+ PSVL+AC  +     G++VHG ++K GF  
Sbjct: 98  SYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHG 157

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  +  +++  Y E G L  AR +FDK+ ++DVVSWS++I SY  +  + E L +   M 
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI--KIDGPLGNSFIVMYSKCGD 246
              V+P  + M+S+     EL  L+  +++H +V+R     K   PL  + I MY KC +
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  A R F  + K    SWTAMI+ Y       + +  FVKML     PN IT+++++  
Sbjct: 278 LAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKE 337

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C   G L  GK +H   +R G       L  A I+ Y +CG +     V  +   ++++ 
Sbjct: 338 CGTAGALELGKLLHAFTLRNGFTLSL-VLATAFIDMYGKCGDVRSARSVFDSFKSKDLMM 396

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W+ +IS YA+     EA ++ V M   G+ P+  ++ S L  C   GSL++G  IH ++ 
Sbjct: 397 WSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYID 456

Query: 427 KIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K   K D  +++S +DMY+ CG  + A+ LF     + + MWN+MI GF  +G+   A+ 
Sbjct: 457 KQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALE 516

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMY 544
           LF +M    +  +++TF+ A+ ACS+ G L++GK + HK++  +G    +     + D+ 
Sbjct: 517 LFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLL 576

Query: 545 AKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            + G L  A  +  SM  R N+  + + +    +H  +       KQ L
Sbjct: 577 GRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFL 625


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 207/621 (33%), Positives = 329/621 (52%), Gaps = 14/621 (2%)

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  +   I+  YG+    +DAR+VFD++  R+  SWS ++  Y  NA   E L+++  MV
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R+ +  D  T+ S+  AC +L  +   R +         + D  +  S I +++KCG L 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 249 SAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            AE  F  +   R   S TAMI  Y R G    AL+++ KM     EP+  T   +LG+C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGP-----ALIEFYAECGKMSECEKVIHAIGER 362
           +   +L +GK +H  I+      E  + G      ALI  YA+CG + + + +   +  +
Sbjct: 181 SSPDFLLDGKHIHKHIL------ESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVK 234

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++SWN +I+ Y   G  K+A  L  +M T G  PD ++ +S L AC +   L+ G  +H
Sbjct: 235 DVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLH 294

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
             +       +F +Q++LI M+++CG    A   F  I++K +  WN+M+  + Q     
Sbjct: 295 VRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGK 354

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           +A+ L+  M L     D  TF + + +C+++G L +GK++H    S G  KD+ + TAL 
Sbjct: 355 DALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALV 414

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           +MYAKCG L  A++ FD +S ++VVSWSAMI     HG   +A  L   M   GI  NEV
Sbjct: 415 NMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEV 474

Query: 602 TFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           T  ++L ACSH G + EG  YF  + + FG+E D ++    +DLL R+G ++ A  ++H+
Sbjct: 475 TASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHT 534

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MPF  +      LL GC++H  +   K + K +      + G Y LL+N+YA  G WD+ 
Sbjct: 535 MPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDV 594

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
            K+R  M   G+K+  G S+I
Sbjct: 595 AKLRRYMRKKGVKRQTGCSSI 615



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 172/593 (29%), Positives = 315/593 (53%), Gaps = 14/593 (2%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D   +  +I+ Y +  S   +R VFD  K+ ++F W++L++CY+ N  ++E++ +Y +M+
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R++ +I  +   SVL AC+ L D+  G  V  +  + GF+KD V+ TS++  + + GCL+
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 148 DARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
           +A  VF  M + RD++S +++I +Y  +      L  +  M  +G+EPD  T  ++  AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
                L   + IH H+L  K   +  + N+ I MY+KCG L  ++  F+ ++ +   SW 
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           AMI+ Y   G  + A   F +M  +   P++ T  ++LG+CA    L +G+ +H +I  +
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G   ++  +   LI  +  CG +    +  ++I ++ + +WN +++ YA+    K+AL L
Sbjct: 301 GFDRDF-AMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC---KDEFVQSSLIDMY 443
              M   G  PD F+ +S + +C ++G+L+ G  IH       C   KD  + ++L++MY
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHE--CSTSCGFEKDVILGTALVNMY 417

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           +KCG    A   F+ I  K VV W++MI    Q+G++ EA+ L H M L  +  +EVT  
Sbjct: 418 AKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTAS 477

Query: 504 TAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           + + ACS+ G+L +G  +       +G+ +D        D+  + G L+ A+ V  +M  
Sbjct: 478 SVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPF 537

Query: 563 RNVVSWSAMIDCYG---MHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACS 611
           +  VS+ A++   G   +HG +    +L K+++      P     +N ++A +
Sbjct: 538 K--VSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAA 588



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 199/399 (49%), Gaps = 6/399 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVLIKCYMWNNFFEESILL 82
           G   D   +T LI  +A+ G L  +  VF +     D      +I  Y+ +   + ++  
Sbjct: 98  GFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDT 157

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           Y KM  +      F Y ++L ACSS   L  G+ +H  I++     +  ++ +++  Y +
Sbjct: 158 YWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAK 217

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G L D++ +F  M  +DVVSW+++IA+Y       +   +FH M   G  PD  T  S+
Sbjct: 218 CGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSI 277

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
             AC     L   R +H  +  R    D  + N+ I M+++CG L SA R F  IEK+  
Sbjct: 278 LGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKEL 337

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-C 321
            +W  M++ Y +    + AL  +  ML     P+  T  +V+ SCA LG LREGK +H C
Sbjct: 338 GAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHEC 397

Query: 322 QIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
                  G E D  LG AL+  YA+CG +++ +K    I  ++++SW+ +I+  A+ G +
Sbjct: 398 ST---SCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHA 454

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           +EALEL   M   G+  +  + +S L AC + G L  G+
Sbjct: 455 EEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGI 493



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 169/345 (48%), Gaps = 2/345 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H H+L +    +      LI  YA+ GSL+ S+ +F T    D   W  +I  Y     
Sbjct: 192 IHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGH 251

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +++  L+H+M     T   + + S+L AC+S   L  G  +H RI   GFD+D  +Q +
Sbjct: 252 DKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNN 311

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  +   G L+ AR+ F  +  +++ +W++++A+Y       + L ++ +M+ EG  PD
Sbjct: 312 LISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPD 371

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+ ++C  L +LR  + IH        + D  LG + + MY+KCG L  A+++F 
Sbjct: 372 RFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFD 431

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I  +   SW+AMI+   + G  ++ALE    M       N +T  +VL +C+  G L E
Sbjct: 432 GISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYE 491

Query: 316 GKSVHCQIIRKGMGPEYDYLGP-ALIEFYAECGKMSECEKVIHAI 359
           G   +   + +  G E D       I+     G + E E V+H +
Sbjct: 492 GID-YFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTM 535



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 4/188 (2%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR+   +H      G   D    T L+  YA+ GSL  ++  FD     D   W+ +I  
Sbjct: 388 LREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAA 447

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG-EKVHGRIIKCGFDK 128
              +   EE++ L H M  +    +     SVL ACS  G L  G +   G     G ++
Sbjct: 448 SAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIER 507

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSM 187
           D+      +   G  G L +A  V   M  +   V+  +++     + DV  G  +   +
Sbjct: 508 DEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRI 567

Query: 188 VREGVEPD 195
           V   +EP+
Sbjct: 568 V--ALEPE 573


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 207/669 (30%), Positives = 362/669 (54%), Gaps = 9/669 (1%)

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
           +E++ L+  + R   +  ++    VL  C+   +   GE+VH + +KCG      +  S+
Sbjct: 84  QEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSL 143

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  Y + G + D R+VFD+M  RDVVSW+S++  Y  N    +  ++F  M  EG  PD+
Sbjct: 144 VDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDY 203

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
            T+ ++  A     ++     IH  V++   + +  + NS I M SK G L  A   F  
Sbjct: 204 YTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDN 263

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           +E + + SW +MI+ +  +G   +A E+F  M     +P   T  +V+ SCA L  L   
Sbjct: 264 MENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV 323

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNILSWNMLISEYA 375
           + +HC+ ++ G+    + L  AL+    +C ++ +   +   + G ++++SW  +IS Y 
Sbjct: 324 RVLHCKTLKSGLSTNQNVL-TALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYL 382

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEF 434
           + G + +A+ L   M+  G+ P+ F+ ++ L+    V       +IH  VIK +  K   
Sbjct: 383 QNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----VQHAVFISEIHAEVIKTNYEKSSS 438

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V ++L+D + K G  + A  +FE I+ K V+ W++M+ G+ Q G + EA  +FHQ+    
Sbjct: 439 VGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREG 498

Query: 495 LEMDEVTFLTAIQACSN-IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
           ++ +E TF + I AC+     +E+GK  H   I   +   + + ++L  +YAK G++++A
Sbjct: 499 IKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESA 558

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
             +F    ER++VSW++MI  Y  HGQ   A  +F++M    ++ + +TF+ ++ AC+H+
Sbjct: 559 HEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHA 618

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V +G+ YFN M     + P ++HY+CM+DL SR+G +  A  +I+ MPFP   ++W  
Sbjct: 619 GLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRI 678

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           +L   R+H+ I++ K   +++       +  Y LLSNIYA  GNW E   VR +M+   +
Sbjct: 679 VLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRV 738

Query: 733 KKVPGYSTI 741
           KK PGYS I
Sbjct: 739 KKEPGYSWI 747



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 290/550 (52%), Gaps = 9/550 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   +  GL +       L++ Y + G++R  R VFD   + D   W  L+  Y WN 
Sbjct: 123 QVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNR 182

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           F ++   L+  M  E      +   +V+ A ++ G +  G ++H  ++K GF+ + ++  
Sbjct: 183 FNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCN 242

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++    + G L DAR VFD M ++D VSW+S+IA +  N    E  + F++M   G +P
Sbjct: 243 SLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKP 302

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              T  S+ ++C  L  L   R +H   L+  +  +  +  + +V  +KC ++  A   F
Sbjct: 303 THATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLF 362

Query: 255 VKIEK-RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
             +   +   SWTAMIS Y ++G   +A+  F  M     +PN  T  T+L     + ++
Sbjct: 363 SLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAV-FI 421

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            E   +H ++I+     +   +G AL++ + + G +S+  KV   I  +++++W+ +++ 
Sbjct: 422 SE---IHAEVIKTNY-EKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAG 477

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC-GNVGSLQLGLQIHGHVIKIDCKD 432
           YA+ G ++EA ++  Q+   G+ P+ F+  S ++AC     S++ G Q H + IK+   +
Sbjct: 478 YAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNN 537

Query: 433 EF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
              V SSL+ +Y+K G    A+ +F+R +++ +V WNSMI G+ Q+G + +A+ +F +M 
Sbjct: 538 ALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQ 597

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
              LE+D +TF+  I AC++ G + KG+   + +I+ + +   +   + + D+Y++ G L
Sbjct: 598 KRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGML 657

Query: 551 QTAQRVFDSM 560
             A  + + M
Sbjct: 658 GKAMDIINGM 667



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 275/555 (49%), Gaps = 21/555 (3%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A+++FD+   RD+   + ++  Y       E L +F S+ R G+ PD  TM  +   C  
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
             +      +H   ++  +     +GNS + MY+K G++    R F ++  R   SW ++
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           ++ Y+ + +  +  E F  M      P+  T+ TV+ + A  G +  G  +H  +++ G 
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             E   +  +LI   ++ G + +   V   +  ++ +SWN +I+ +   G   EA E   
Sbjct: 235 ETE-RLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCG 447
            MQ  G  P   + AS + +C ++  L L   +H   +K     ++ V ++L+   +KC 
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353

Query: 448 FKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
             + A+ LF  +   +SVV W +MI G+ QNG++ +A+NLF  M    ++ +  T+ T +
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL 413

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
                +   E    +H ++I     K   + TAL D + K G++  A +VF+ +  ++V+
Sbjct: 414 TVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI 469

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH-SGSVEEGKFYFNA 625
           +WSAM+  Y   G+  +AA +F Q+   GIKPNE TF +I+ AC+  + SVE+GK  F+A
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGK-QFHA 528

Query: 626 MRIFGVEPDLQHYAC----MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH- 680
              + ++  L +  C    +V L ++ G+IE A ++        +   W ++++G   H 
Sbjct: 529 ---YAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQHG 584

Query: 681 ---KRIDVMKTIEKE 692
              K ++V + ++K 
Sbjct: 585 QAKKALEVFEEMQKR 599



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 102/197 (51%), Gaps = 1/197 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           ++ +HA ++ T         T L++++ ++G++  +  VF+  +  D   W+ ++  Y  
Sbjct: 421 ISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQ 480

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSS-LGDLGSGEKVHGRIIKCGFDKDDV 131
               EE+  ++H++ RE    + F + S++ AC++    +  G++ H   IK   +    
Sbjct: 481 AGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALC 540

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + +S++  Y + G ++ A ++F +   RD+VSW+S+I+ Y  +    + L++F  M +  
Sbjct: 541 VSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRN 600

Query: 192 VEPDFVTMLSLAEACGE 208
           +E D +T + +  AC  
Sbjct: 601 LEVDAITFIGVISACAH 617


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 192/619 (31%), Positives = 344/619 (55%), Gaps = 6/619 (0%)

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           +++ V  T  L +Y E G + +A  +F+ M   D   W+ +I  + DN    + +  +H 
Sbjct: 57  ERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHR 116

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   GV  D  T   + +ACG L  L     +HG V++  + +D  +GNS I+MY+K G 
Sbjct: 117 MEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGC 176

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + SAE  F ++  R   SW +MIS Y   G   ++L  F +M     + +  ++I +LG+
Sbjct: 177 IESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGA 236

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNIL 365
           C+  G+LR GK +HCQ++R  +  E D +   +L++ YA+CG+M   E++   I +++I+
Sbjct: 237 CSLEGFLRNGKEIHCQMMRSRL--ELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIV 294

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +WN +I  Y+    S E+   + +MQ  G L PD  ++ + L  C  + ++ LG  +HG 
Sbjct: 295 AWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGF 354

Query: 425 VIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
            I+       V +++L+DMY +CG    A  LF ++ +++++ WN+MI  + +NG + +A
Sbjct: 355 AIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKA 414

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + LF  +    L+ D  T  + + A + +  L + + +H  +    +  + ++  ++  M
Sbjct: 415 MTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFM 474

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y KCG+L  A+ +FD M+ ++V+SW+ +I  Y +HG    +  LF +M + G +PN  TF
Sbjct: 475 YGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTF 534

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           +++L +CS +G V EG  YFN+M R + + P ++HY C++DL+ R+G+++ A   I  MP
Sbjct: 535 VSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMP 594

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
                 IWG+LL   R    +++ +   + +     ++ G Y LLSN+YAE G W++  +
Sbjct: 595 LAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVER 654

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           ++  M+  GL+K  G S +
Sbjct: 655 IKFHMKKEGLEKSVGCSVV 673



 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 175/534 (32%), Positives = 294/534 (55%), Gaps = 10/534 (1%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           TR + SY E G ++++  +F+  ++ D+F+W V+I+ ++ N  F +++  YH+M      
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
             NF YP V++AC  L DL  GE+VHG++IK G D D  I  S++  Y + GC++ A  V
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F +M  RD+VSW+S+I+ Y    D    L  F  M   G++ D  +++ +  AC     L
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           R  + IH  ++R ++++D  +  S + MY+KCG +  AER F +I  +   +W AMI  Y
Sbjct: 244 RNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGY 303

Query: 273 NRSGWFQKALESFVKMLEVKE----EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           + +    ++ ESF  + +++E     P+ IT+I +L  CA L  +  GKSVH   IR G 
Sbjct: 304 SLNA---QSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGF 360

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
            P    L  AL++ Y ECGK+   E +   + ERN++SWN +I+ Y + G +++A+ L  
Sbjct: 361 LPHL-VLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQ 419

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCG 447
            +    L PD+ ++AS L A   + SL+   QIHG+V K+    + FV +S++ MY KCG
Sbjct: 420 DLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCG 479

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  +F+R+  K V+ WN++I  +  +G    +I LF +M     E +  TF++ + 
Sbjct: 480 NLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLL 539

Query: 508 ACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           +CS  G + +G ++ +     Y +   I     + D+  + G+L  A+   + M
Sbjct: 540 SCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEM 593



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 213/420 (50%), Gaps = 5/420 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C  L  L    R+H  ++ +GL  D      LI  YA++G + S+ +VF      D
Sbjct: 132 VIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRD 191

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+       S+  + +M      +  F    +L ACS  G L +G+++H 
Sbjct: 192 LVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHC 251

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           ++++   + D ++QTS++  Y + G +D A ++FD++T + +V+W+++I  Y  NA   E
Sbjct: 252 QMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFE 311

Query: 180 GLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
                  M   G + PD++TM++L   C +L ++   +S+HG  +R        L  + +
Sbjct: 312 SFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALV 371

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY +CG L  AE  F ++ +R   SW AMI+ Y ++G  +KA+  F  +     +P+  
Sbjct: 372 DMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDAT 431

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ ++L + A L  LRE + +H  + +  +     ++  +++  Y +CG +    ++   
Sbjct: 432 TIASILPAYAELASLREAEQIHGYVTKLKLDSN-TFVSNSIVFMYGKCGNLLRAREIFDR 490

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++++SWN +I  YA  G  + ++EL  +M+  G  P+  +  S L +C   G +  G
Sbjct: 491 MTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEG 550



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 4/180 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +    +LR+  ++H ++    L  +   S  ++  Y + G+L  +R +FD     D 
Sbjct: 437 LPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDV 496

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  + F   SI L+ +M  +    +   + S+L +CS  G +  G +    
Sbjct: 497 ISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNS 556

Query: 121 IIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYFDNADV 177
            +K  ++ +  I+    IL   G  G LD A+   ++M        W S++ +  +  DV
Sbjct: 557 -MKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDV 615


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 209/649 (32%), Positives = 347/649 (53%), Gaps = 7/649 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  +L  C+   DL  G+ +H ++++ G      +  S++  Y + G +  A+ VF+ +T
Sbjct: 13  FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT 72

Query: 158 SRDVVSWSSIIASYFDNADV--SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           ++DVVSW+ +I  Y     V  S  +++F  M  E   P+  T   +  A          
Sbjct: 73  NKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
              H   ++     D  +G+S I MY K G +L A + F  I +R T SW  +IS Y   
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
               +A E F  M   +   +     +VL +      +  GK +HC  ++ G+      +
Sbjct: 193 RMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGL-LSIASV 251

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
           G AL+  Y +CG + +  K     G+++ ++W+ +I+ YA+ G S EAL L   M   G 
Sbjct: 252 GNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNLAY 453
            P  F+    ++AC ++G+L+ G QIHG+ +K   +C+  F+ ++L+DMY+KCG    A 
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFM-TALVDMYAKCGSLVDAR 370

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
             F+ +++  +V+W SMI G+ QNG +  A+ L+ +M +  +   E+T  + ++ACS++ 
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LE+GK +H + I YG   ++ I +AL+ MYAKCG L+    VF  M  R++++W+AMI 
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
               +G+   A  LF+++     KP+ VTF+N+L ACSH G VE GK YF  M   FG+ 
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P ++HYACMVD+LSR+G +    + I S        +W  LL  CR ++  ++     ++
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L   G+ ++  Y LLS+IY   G  D+  +VR +M++ G+ K PG S I
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWI 659



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 173/566 (30%), Positives = 282/566 (49%), Gaps = 8/566 (1%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   CT   +L+K   +HA LL TG       +  L+  YA+ GS+  ++LVF++    D
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 60  SFMWAVLIKCYMWNNFFEESIL--LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
              W  LI  Y        S +  L+ +M  E    +   +  V  A SS  +   G + 
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   IK     D  + +S++  Y + GC+ DARKVFD +  R+ VSW++II+ Y      
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E  ++F  M RE    D     S+  A      +   + IH   L+  +     +GN+ 
Sbjct: 196 FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCG L  A +TF     +   +W+AMI+ Y ++G   +AL  F  M     +P+ 
Sbjct: 256 VTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSE 315

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T + V+ +C+ +G L EGK +H   ++ G   +  Y   AL++ YA+CG + +  K   
Sbjct: 316 FTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI-YFMTALVDMYAKCGSLVDARKGFD 374

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + E +I+ W  +IS YA+ G ++ AL L  +MQ   +MP   ++AS L AC ++ +L+ 
Sbjct: 375 YLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQ 434

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G QIH   IK     E  + S+L  MY+KCG      L+F R+  + ++ WN+MI G  Q
Sbjct: 435 GKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQ 494

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIY 535
           NG  L+A+ LF ++     + D VTF+  + ACS++G +E+GK +    L  +G+   + 
Sbjct: 495 NGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVE 554

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS 561
               + D+ ++ G L   +   +S +
Sbjct: 555 HYACMVDILSRAGKLHETKEFIESAT 580



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 196/385 (50%), Gaps = 5/385 (1%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P   + + +L  C     L++GK++H Q++R G      YL  +L+  YA+CG + + + 
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSV-YLTNSLVNLYAKCGSIVKAKL 66

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEA--LELLVQMQTWGLMPDSFSVASSLSACGNV 412
           V  +I  ++++SWN LI+ Y++KG    +  +EL  +M+    +P+  + +   +A  + 
Sbjct: 67  VFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSS 126

Query: 413 GSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
                GLQ H   IK  +  D FV SSLI+MY K G    A  +F+ I +++ V W ++I
Sbjct: 127 PETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G+     + EA  LF  M       D+  + + + A +    +  GK +H   +  G+ 
Sbjct: 187 SGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLL 246

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
               +  AL  MY KCG L  A + F+   +++ ++WSAMI  Y   G  ++A +LF  M
Sbjct: 247 SIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM 306

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
             +G KP+E TF+ ++ ACS  G++EEGK         G E  +     +VD+ ++ G +
Sbjct: 307 HLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSL 366

Query: 652 EGAFKMIHSMPFPANGSIWGALLNG 676
             A K    +  P +  +W ++++G
Sbjct: 367 VDARKGFDYLKEP-DIVLWTSMISG 390



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 177/359 (49%), Gaps = 3/359 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   L  GL         L+  Y + G L  +   F+   + D   W+ +I  Y    
Sbjct: 235 QIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAG 294

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ L++ M       S F +  V+ ACS +G L  G+++HG  +K G++      T
Sbjct: 295 DSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMT 354

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G L DARK FD +   D+V W+S+I+ Y  N +    L ++  M  E + P
Sbjct: 355 ALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMP 414

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
             +TM S+  AC  L +L   + IH   ++    ++ P+G++   MY+KCG L      F
Sbjct: 415 HELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVF 474

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  R   +W AMIS  +++G   KALE F ++     +P+ +T + VL +C+ +G + 
Sbjct: 475 RRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVE 534

Query: 315 EGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIH-AIGERNILSWNMLI 371
            GK     ++ + G+ P  ++    +++  +  GK+ E ++ I  A  +  +  W +L+
Sbjct: 535 RGKVYFRMMLDEFGIVPRVEHYA-CMVDILSRAGKLHETKEFIESATIDHGMCLWRILL 592



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 25/200 (12%)

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  L     +F+  +  C+    L+KGK +H +L+  G    +Y+  +L ++YAKCG 
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA--ASLFKQMLDSGIKPNEVTFMNIL 607
           +  A+ VF+S++ ++VVSW+ +I+ Y   G +  +    LF++M      PN  TF  + 
Sbjct: 61  IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120

Query: 608 WACS-----------HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            A S           H+ +++   FY           D+   + ++++  + G +  A K
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFY-----------DVFVGSSLINMYCKIGCMLDARK 169

Query: 657 MIHSMPFPANGSIWGALLNG 676
           +  ++P   N   W  +++G
Sbjct: 170 VFDTIP-ERNTVSWATIISG 188


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 218/713 (30%), Positives = 362/713 (50%), Gaps = 48/713 (6%)

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF---- 126
           M    F  S LL    ++E   I+      +L  C +L +L   +++H  ++K G     
Sbjct: 1   MATTLFPSSTLLVPASLKEANPITRNSSSKLLVNCKTLKEL---KQLHCDMMKKGLLCHK 57

Query: 127 ---DKDDVIQTSILCTYGEFGCLDDARKVF--DKMTSRDVVSWSSIIASYFDNADVSEGL 181
              + + +I +S+    G    LD AR  F  D      +  ++ +I  Y       + +
Sbjct: 58  PASNLNKLIASSV--QIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAI 115

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            ++  M+  G+ PD  T   L  AC ++ +L     +HG VL+  ++ D  + NS I  Y
Sbjct: 116 LLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFY 175

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           ++CG +    + F  + +R   SWT++I+ Y+     ++A+  F +M E   EPN +T++
Sbjct: 176 AECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMV 235

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            V+ +CA L  L  GK V   I   GM      +  AL++ Y +CG +    ++      
Sbjct: 236 CVISACAKLKDLELGKKVCSYISELGMELSTIMVN-ALVDMYMKCGDICAARQIFDECAN 294

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           +N++ +N ++S Y     + + L +L +M   G  PD  ++ S+++AC  +G L +G   
Sbjct: 295 KNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSS 354

Query: 422 HGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG-- 478
           H +V++   +  + + +++IDMY KCG +  A  +FE +  K+VV WNS+I G  ++G  
Sbjct: 355 HAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDM 414

Query: 479 ------------------NSL-----------EAINLFHQMYLNCLEMDEVTFLTAIQAC 509
                             N++           EAI LF +M    +  D VT +    AC
Sbjct: 415 ELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC 474

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
             +G L+  KWV   +    +  D+ + TAL DM+++CGD  +A  VF  M +R+V +W+
Sbjct: 475 GYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWT 534

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           A I    M G    A  LF +ML+  +KP++V F+ +L ACSH GSV++G+  F +M + 
Sbjct: 535 AAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKA 594

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
            G+ P + HY CMVDLL R+G +E A  +I SMP   N  +WG+LL  CR HK +++   
Sbjct: 595 HGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHY 654

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             ++L+       G + LLSNIYA  G W +  +VR  M+  G++KVPG S+I
Sbjct: 655 AAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSI 707



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 187/674 (27%), Positives = 328/674 (48%), Gaps = 81/674 (12%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPAST--RLIESYAEMGSLRSSRLVFDTFKEPDS 60
           L  +C  L++L +LH  ++  GL    PAS   +LI S  ++G+L S     + F + D 
Sbjct: 31  LLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDG 90

Query: 61  -----FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
                FM+  LI+ Y      +++ILLY +M+        + +P +L ACS +  L  G 
Sbjct: 91  NMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGV 150

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VHG ++K G + D  +  S++  Y E G +D  RK+FD M  R+VVSW+S+I  Y    
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRD 210

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E + +F  M   GVEP+ VTM+ +  AC +L  L   + +  ++    +++   + N
Sbjct: 211 LSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVN 270

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY KCGD+ +A + F +   +    +  ++S Y    W    L    +ML+    P
Sbjct: 271 ALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRP 330

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +T+++ + +CA LG L  GKS H  ++R G+   +D +  A+I+ Y +CGK     KV
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGL-EGWDNISNAIIDMYMKCGKREAACKV 389

Query: 356 IHAIGERNILSWNMLISEYARKG-------------------------------MSKEAL 384
              +  + +++WN LI+   R G                               M +EA+
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAI 449

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
           EL  +MQ  G+  D  ++    SACG +G+L L   +  ++ K D   D  + ++L+DM+
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMF 509

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           S+CG  + A  +F+R++++ V  W + I      GN+  AI LF++M    ++ D+V F+
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFV 569

Query: 504 TAIQACSNIGQLEKGK---WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
             + ACS+ G +++G+   W   K  ++G+R                             
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEK--AHGIRP---------------------------- 599

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              ++V +  M+D  G  G L +A  L + M    I+PN+V + ++L AC    +VE   
Sbjct: 600 ---HIVHYGCMVDLLGRAGLLEEAVDLIQSM---PIEPNDVVWGSLLAACRKHKNVELA- 652

Query: 621 FYFNAMRIFGVEPD 634
            ++ A ++  + P+
Sbjct: 653 -HYAAEKLTQLAPE 665


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 207/646 (32%), Positives = 345/646 (53%), Gaps = 6/646 (0%)

Query: 99  PSVLRACSSLGD-LGSGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFDKM 156
           P   R+   +G+ L +GE    R +       + + T+++ + Y + G L +ARK+FD M
Sbjct: 50  PDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGM 109

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R  V+W+ +I  Y       E  ++F  M R G EPD+VT ++L   C          
Sbjct: 110 VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQIT 169

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            +   +++        +GN+ +  Y K   L  A + F ++ +  + S+ AMI+ Y++ G
Sbjct: 170 QVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDG 229

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             +KA+  FV+M     +P   T   VL +  GL  +  G+ +H  +I+        ++ 
Sbjct: 230 LDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNV-FVS 288

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL++FY++   + +  K+   + E++ +S+N++IS YA  G  K A +L  ++Q     
Sbjct: 289 NALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFD 348

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLL 455
              F  A+ LS   N    ++G QIH   I      E  V +SL+DMY+KCG    A ++
Sbjct: 349 RKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMI 408

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F  +  +S V W +MI  + Q G   E + LF++M    +  D+ TF + ++A ++I  L
Sbjct: 409 FTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 468

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             GK +H  +I  G   +++  +AL D+YAKCG ++ A + F  M +RN+VSW+AMI  Y
Sbjct: 469 SLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAY 528

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             +G+       FK+M+ SG++P+ V+F+ +L ACSHSG VEEG ++FN+M +I+ ++P 
Sbjct: 529 AQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPR 588

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL- 693
            +HYA +VD+L RSG    A K++  MP   +  +W ++LN CRIHK  ++ +    +L 
Sbjct: 589 REHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLF 648

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++    D   Y  +SNIYA  G W+   KV   M   G+KK+P YS
Sbjct: 649 NMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYS 694



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/616 (25%), Positives = 302/616 (49%), Gaps = 16/616 (2%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H +  ++  +I  Y + G+L  +R +FD   E  +  W +LI  Y   N F+E+  L+ +
Sbjct: 80  HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 139

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M R         + ++L  C+         +V  +IIK G+D   ++  +++ +Y +   
Sbjct: 140 MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 199

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           LD A ++F +M   D VS++++I  Y  +    + + +F  M   G++P   T  ++  A
Sbjct: 200 LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCA 259

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
              L  +   + IH  V++     +  + N+ +  YSK   ++ A + F ++ ++   S+
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 319

Query: 266 TAMISCYNRSGWFQKALESFVKM----LEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             +IS Y   G  + A + F ++     + K+ P   T++++  +   L W   G+ +H 
Sbjct: 320 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP-FATMLSIASNT--LDW-EMGRQIHA 375

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           Q I      E   +G +L++ YA+CGK  E E +   +  R+ + W  +IS Y +KG  +
Sbjct: 376 QTIVTTADSEI-LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 434

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLI 440
           E L+L  +M+   ++ D  + AS L A  ++ SL LG Q+H  +IK     + F  S+L+
Sbjct: 435 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 494

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           D+Y+KCG    A   F+ +  +++V WN+MI  + QNG +   +  F +M L+ L+ D V
Sbjct: 495 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 554

Query: 501 TFLTAIQACSNIGQLEKGKWVHH---KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           +FL  + ACS+ G +E+G W  +   ++     R++ Y   ++ DM  + G    A+++ 
Sbjct: 555 SFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY--ASVVDMLCRSGRFNEAEKLM 612

Query: 558 DSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
             M  + + + WS++++   +H     A     Q+ +     +   ++N+    + +G  
Sbjct: 613 AEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQW 672

Query: 617 EEGKFYFNAMRIFGVE 632
           E       AMR  GV+
Sbjct: 673 ENVSKVHKAMRDRGVK 688



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 249/529 (47%), Gaps = 14/529 (2%)

Query: 12  KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           ++T++   ++  G          L++SY +   L  +  +F    E DS  +  +I  Y 
Sbjct: 167 QITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYS 226

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            +   E+++ L+ +M       + F + +VL A   L D+  G+++H  +IK  F  +  
Sbjct: 227 KDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVF 286

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  ++L  Y +   + DARK+FD+M  +D VS++ II+ Y  +        +F  +    
Sbjct: 287 VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTA 346

Query: 192 VEPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            +     F TMLS+A            R IH   +      +  +GNS + MY+KCG   
Sbjct: 347 FDRKQFPFATMLSIA---SNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFE 403

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            AE  F  +  R    WTAMIS Y + G++++ L+ F KM +     +  T  ++L + A
Sbjct: 404 EAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASA 463

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +  L  GK +H  II+ G      + G AL++ YA+CG + +  +    + +RNI+SWN
Sbjct: 464 SIASLSLGKQLHSFIIKSGFMSNV-FSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWN 522

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL---QIHGHV 425
            +IS YA+ G ++  L+   +M   GL PDS S    LSAC + G ++ GL        +
Sbjct: 523 AMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQI 582

Query: 426 IKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
            K+D + E   +S++DM  + G F     L+ E       +MW+S++     + N   A 
Sbjct: 583 YKLDPRREHY-ASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELAR 641

Query: 485 NLFHQMYLNCLEM-DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
               Q++ N  E+ D   ++      +  GQ E    VH  +   GV+K
Sbjct: 642 RAADQLF-NMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKK 689



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 246/523 (47%), Gaps = 44/523 (8%)

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L    +I   +++     D    N  +  + K G+L  A + F K+  + T S   MIS 
Sbjct: 33  LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 92

Query: 272 YNRSG-------------------W------------FQKALESFVKMLEVKEEPNLITL 300
           Y +SG                   W            F++A E FV+M     EP+ +T 
Sbjct: 93  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIH 357
           +T+L  C G     +   V  QII+ G    YD    +G  L++ Y +  ++    ++  
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLG----YDSRLIVGNTLVDSYCKSNRLDLACQLFK 208

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG--SL 415
            + E + +S+N +I+ Y++ G+ ++A+ L V+MQ  GL P  F+ A+ L  C N+G   +
Sbjct: 209 EMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDI 266

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            LG QIH  VIK +   + FV ++L+D YSK      A  LF+ + ++  V +N +I G+
Sbjct: 267 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 326

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
             +G    A +LF ++     +  +  F T +   SN    E G+ +H + I      +I
Sbjct: 327 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 386

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            +  +L DMYAKCG  + A+ +F +++ R+ V W+AMI  Y   G   +   LF +M  +
Sbjct: 387 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 446

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            +  ++ TF ++L A +   S+  GK   + +   G   ++   + ++D+ ++ G I+ A
Sbjct: 447 SVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 506

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
            +    MP   N   W A+++    +   +      KE+ ++G
Sbjct: 507 VQTFQEMP-DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSG 548


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 203/641 (31%), Positives = 358/641 (55%), Gaps = 14/641 (2%)

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
           ++ + +K+H  ++  G  ++ V+ T ++  Y   G +  +R  FD +  +++ SW+SII+
Sbjct: 34  NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93

Query: 170 SYFDNADVSEGLK---MFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           +Y       E +       SM   G + PDF T   + +AC    SL   + +H  V + 
Sbjct: 94  AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKM 150

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             + D  +  S + +YS+ G L  A + FV +  +   SW AMIS + ++G    AL   
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            +M     + + IT+ ++L  CA    +  G  +H  +++ G+  +  ++  ALI  Y++
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV-FVSNALINMYSK 269

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
            G++ + + V   +  R+++SWN +I+ Y +      AL     MQ  G+ PD  +V S 
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            S    +   ++   I G VI+ +   KD  + ++L++MY+K G+ N A+ +F+++ +K 
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM--DEVTFLTAIQACSNIGQLEKGKWV 521
            + WN+++ G+ QNG + EAI+ ++ M   C +   ++ T+++ I A S++G L++G  +
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMME-ECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H KLI   +  D+++ T L D+Y KCG L+ A  +F  +     V W+A+I   G+HG+ 
Sbjct: 449 HAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRG 508

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYAC 640
            +A  LFK ML   +K + +TF+++L ACSHSG V+EG+  F+ M + +G++P L+HY C
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDLL R+G +E A++++ +MP   + SIWGALL+ C+I+   ++       L    + +
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            GYY LLSNIYA    W+   KVRS+    GL+K PG+S++
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSV 669



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 187/662 (28%), Positives = 322/662 (48%), Gaps = 45/662 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF SC N+    +LHA LLV G   +   ST+LI  Y   G +  SR  FD   + + F 
Sbjct: 28  LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIR----EQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           W  +I  Y+    + E++   +++             + +P +L+AC SL D   G+KVH
Sbjct: 88  WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVH 144

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             + K GF+ D  +  S++  Y  +G LD A KVF  M  +DV SW+++I+ +  N + +
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L + + M  EGV+ D +T+ S+   C +   +     IH HVL+  +  D  + N+ I
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSK G L  A+  F ++E R   SW ++I+ Y ++     AL  F  M      P+L+
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLL 324

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++++    + L   R  +S+   +IR+    +   +G AL+  YA+ G M+    V   
Sbjct: 325 TVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQ 384

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQL 417
           +  ++ +SWN L++ Y + G++ EA++    M+     +P+  +  S + A  +VG+LQ 
Sbjct: 385 LPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQ 444

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G++IH  +IK     D FV + LID+Y KCG    A  LF  I + + V WN++I     
Sbjct: 445 GMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGI 504

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G   EA+ LF  M    ++ D +TF++ + ACS+ G +++G+                 
Sbjct: 505 HGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ----------------- 547

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                    KC D+   +       + ++  +  M+D  G  G L  A  L + M    I
Sbjct: 548 ---------KCFDIMQKEYGI----KPSLKHYGCMVDLLGRAGYLEKAYELVRNM---PI 591

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAF 655
           +P+   +  +L AC   G+ E G    +  R+  V+ + + +Y  + ++ + +   EG  
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASD--RLLEVDSENVGYYVLLSNIYANTEKWEGVI 649

Query: 656 KM 657
           K+
Sbjct: 650 KV 651



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 244/488 (50%), Gaps = 16/488 (3%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C +L    ++H  +   G   D   +  L+  Y+  G L  +  VF      D  
Sbjct: 129 PILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  +  N     ++ + ++M  E   +      S+L  C+   D+ +G  +H  +
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K G D D  +  +++  Y +FG L DA+ VFD+M  RD+VSW+SIIA+Y  N D S  L
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVM 240
           + F  M   G+ PD +T++SL     +L   R +RSI G V+RR+ +  D  +GN+ + M
Sbjct: 309 RFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNM 368

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLIT 299
           Y+K G +  A   F ++ ++ T SW  +++ Y ++G   +A++++  M E ++  PN  T
Sbjct: 369 YAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++++ + + +G L++G  +H ++I+  +  +  ++   LI+ Y +CG++ +   + + I
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV-FVATCLIDLYGKCGRLEDAMSLFYEI 487

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                + WN +I+     G  +EAL+L   M    +  D  +  S LSAC + G +  G 
Sbjct: 488 PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547

Query: 420 QIHGHVIKIDCKDEFVQSSL------IDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI- 471
           +       I  K+  ++ SL      +D+  + G+   AY L   +  Q    +W +++ 
Sbjct: 548 K----CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLS 603

Query: 472 -CGFYQNG 478
            C  Y N 
Sbjct: 604 ACKIYGNA 611



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 55/116 (47%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  ++HA L+   L+ D   +T LI+ Y + G L  +  +F       S
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             W  +I     +   EE++ L+  M+ E+    +  + S+L ACS  G +  G+K
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 203/641 (31%), Positives = 358/641 (55%), Gaps = 14/641 (2%)

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
           ++ + +K+H  ++  G  ++ V+ T ++  Y   G +  +R  FD +  +++ SW+SII+
Sbjct: 34  NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93

Query: 170 SYFDNADVSEGLK---MFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           +Y       E +       SM   G + PDF T   + +AC    SL   + +H  V + 
Sbjct: 94  AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKM 150

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             + D  +  S + +YS+ G L  A + FV +  +   SW AMIS + ++G    AL   
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            +M     + + IT+ ++L  CA    +  G  +H  +++ G+  +  ++  ALI  Y++
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV-FVSNALINMYSK 269

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
            G++ + + V   +  R+++SWN +I+ Y +      AL     MQ  G+ PD  +V S 
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            S    +   ++   I G VI+ +   KD  + ++L++MY+K G+ N A+ +F+++ +K 
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM--DEVTFLTAIQACSNIGQLEKGKWV 521
            + WN+++ G+ QNG + EAI+ ++ M   C +   ++ T+++ I A S++G L++G  +
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMME-ECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H KLI   +  D+++ T L D+Y KCG L+ A  +F  +     V W+A+I   G+HG+ 
Sbjct: 449 HAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRG 508

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYAC 640
            +A  LFK ML   +K + +TF+++L ACSHSG V+EG+  F+ M + +G++P L+HY C
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDLL R+G +E A++++ +MP   + SIWGALL+ C+I+   ++       L    + +
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            GYY LLSNIYA    W+   KVRS+    GL+K PG+S++
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSV 669



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 187/662 (28%), Positives = 322/662 (48%), Gaps = 45/662 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF SC N+    +LHA LLV G   +   ST+LI  Y   G +  SR  FD   + + F 
Sbjct: 28  LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIR----EQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           W  +I  Y+    + E++   +++             + +P +L+AC SL D   G+KVH
Sbjct: 88  WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVH 144

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             + K GF+ D  +  S++  Y  +G LD A KVF  M  +DV SW+++I+ +  N + +
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L + + M  EGV+ D +T+ S+   C +   +     IH HVL+  +  D  + N+ I
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSK G L  A+  F ++E R   SW ++I+ Y ++     AL  F  M      P+L+
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLL 324

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++++    + L   R  +S+   +IR+    +   +G AL+  YA+ G M+    V   
Sbjct: 325 TVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQ 384

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQL 417
           +  ++ +SWN L++ Y + G++ EA++    M+     +P+  +  S + A  +VG+LQ 
Sbjct: 385 LPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQ 444

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G++IH  +IK     D FV + LID+Y KCG    A  LF  I + + V WN++I     
Sbjct: 445 GMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGI 504

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G   EA+ LF  M    ++ D +TF++ + ACS+ G +++G+                 
Sbjct: 505 HGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ----------------- 547

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                    KC D+   +       + ++  +  M+D  G  G L  A  L + M    I
Sbjct: 548 ---------KCFDIMQKEYGI----KPSLKHYGCMVDLLGRAGYLEKAYELVRNM---PI 591

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAF 655
           +P+   +  +L AC   G+ E G    +  R+  V+ + + +Y  + ++ + +   EG  
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASD--RLLEVDSENVGYYVLLSNIYANTEKWEGVI 649

Query: 656 KM 657
           K+
Sbjct: 650 KV 651



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 244/488 (50%), Gaps = 16/488 (3%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C +L    ++H  +   G   D   +  L+  Y+  G L  +  VF      D  
Sbjct: 129 PILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  +  N     ++ + ++M  E   +      S+L  C+   D+ +G  +H  +
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K G D D  +  +++  Y +FG L DA+ VFD+M  RD+VSW+SIIA+Y  N D S  L
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVM 240
           + F  M   G+ PD +T++SL     +L   R +RSI G V+RR+ +  D  +GN+ + M
Sbjct: 309 RFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNM 368

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLIT 299
           Y+K G +  A   F ++ ++ T SW  +++ Y ++G   +A++++  M E ++  PN  T
Sbjct: 369 YAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++++ + + +G L++G  +H ++I+  +  +  ++   LI+ Y +CG++ +   + + I
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV-FVATCLIDLYGKCGRLEDAMSLFYEI 487

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                + WN +I+     G  +EAL+L   M    +  D  +  S LSAC + G +  G 
Sbjct: 488 PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547

Query: 420 QIHGHVIKIDCKDEFVQSSL------IDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI- 471
           +       I  K+  ++ SL      +D+  + G+   AY L   +  Q    +W +++ 
Sbjct: 548 K----CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLS 603

Query: 472 -CGFYQNG 478
            C  Y N 
Sbjct: 604 ACKIYGNA 611



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 55/116 (47%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  ++HA L+   L+ D   +T LI+ Y + G L  +  +F       S
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             W  +I     +   EE++ L+  M+ E+    +  + S+L ACS  G +  G+K
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 219/653 (33%), Positives = 346/653 (52%), Gaps = 44/653 (6%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y + L+ C    +   G+ +H  I+K G   D      +L  Y +   L DA K+FD+M 
Sbjct: 41  YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP 100

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEA--CGELCSL 212
            R+ +S+ ++I  Y ++    E +++F  + REG E +   F T+L L  +  CGEL   
Sbjct: 101 ERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGEL--- 157

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                IH  + +   + +  +G + I  YS CG +  A   F  I  +   SWT M++C+
Sbjct: 158 --GWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCF 215

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
             +  F++AL+ F +M  V  +PN  T  +V  +C GL     GKSVH   ++     E 
Sbjct: 216 AENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRY--EL 273

Query: 333 D-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           D Y+G AL++ Y + G + +       I +++++ W+ +I+ YA+   SKEA+E+  QM+
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCG-FK 449
              ++P+ F+ AS L AC  +  L LG QIH HVIKI    D FV ++L+D+Y+KCG  +
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 393

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           N   L  E   +  V  WN++I G  Q G+  +A+ LF  M    ++  EVT+ +A++AC
Sbjct: 394 NSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 453

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +++  LE G  +H   +     KDI +  AL DMYAKCG ++ A+ VFD M++++ VSW+
Sbjct: 454 ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWN 513

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           AMI  Y MHG                             AC+++G +++G+ YF +M + 
Sbjct: 514 AMISGYSMHG----------------------------LACANAGLLDQGQAYFTSMIQD 545

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
            G+EP ++HY CMV LL R G ++ A K+I  +PF  +  +W ALL  C IH  I++ + 
Sbjct: 546 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI 605

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             + +      D   + LLSN+YA    WD    VR  M+  G+KK PG S I
Sbjct: 606 SAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWI 658



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 292/572 (51%), Gaps = 37/572 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH  +L  G   D  A   L+  Y +   L  +  +FD   E ++  +  LI+ Y  +  
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSL--GDLGSGEKVHGRIIKCGFDKDDVIQ 133
           F E+I L+ ++ RE   ++ F++ ++L+   S+  G+LG G  +H  I K G + +  + 
Sbjct: 120 FLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWG--IHACIFKLGHESNAFVG 177

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           T+++  Y   G +D AR+VFD +  +D+VSW+ ++  + +N    E LK+F  M   G +
Sbjct: 178 TALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T  S+ +AC  L +    +S+HG  L+ + ++D  +G + + +Y+K GD+  A   
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXA 297

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +I K+    W+ MI+ Y +S   ++A+E F +M +    PN  T  +VL +CA +  L
Sbjct: 298 FEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL 357

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN-ILSWNMLIS 372
             G  +HC +I+ G+  +  ++  AL++ YA+CG+M     +      RN +  WN +I 
Sbjct: 358 NLGNQIHCHVIKIGLHSDV-FVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIV 416

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            + + G  ++AL L + M  + +     + +S+L AC ++ +L+ GLQIH   +K    K
Sbjct: 417 GHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDK 476

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V ++LIDMY+KCG    A L+F+ + ++  V WN+MI G+  +G             
Sbjct: 477 DIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG------------- 523

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
                           AC+N G L++G+     +I  +G+   I   T +  +  + G L
Sbjct: 524 ---------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHL 568

Query: 551 QTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
             A ++ D +  + +V+ W A++    +H  +
Sbjct: 569 DKAVKLIDEIPFQPSVMVWRALLGACVIHNDI 600



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 5/299 (1%)

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSF---SVASSLSACGNVGSLQLGLQIHGH 424
           N  +  ++R+G S ++ +L  Q     + P  F   + A++L  C        G  +H  
Sbjct: 5   NNFLIRFSRRGFSVQSAKL-TQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63

Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           ++K   C D F  + L++MY K  F   A  LF+ + +++ + + ++I G+ ++   LEA
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           I LF +++    E++   F T ++   ++   E G  +H  +   G   + ++ TAL D 
Sbjct: 124 IELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDA 183

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+ CG +  A+ VFD +  +++VSW+ M+ C+  +    +A  LF QM   G KPN  TF
Sbjct: 184 YSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTF 243

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            ++  AC    + + GK           E DL     ++DL ++SGDI+ A      +P
Sbjct: 244 ASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIP 302



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 12/204 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVF-DTFKEP 58
           + ++C  +  L    ++H H++  GLH D   S  L++ YA+ G + +S  +F ++    
Sbjct: 347 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRN 406

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  +I  ++     E+++ L+  M+  +   +   Y S LRAC+SL  L  G ++H
Sbjct: 407 DVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIH 466

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY------- 171
              +K  FDKD V+  +++  Y + G + DAR VFD M  +D VSW+++I+ Y       
Sbjct: 467 SLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLAC 526

Query: 172 FDNADVSEGLKMFHSMVRE-GVEP 194
            +   + +G   F SM+++ G+EP
Sbjct: 527 ANAGLLDQGQAYFTSMIQDHGIEP 550


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 205/655 (31%), Positives = 352/655 (53%), Gaps = 13/655 (1%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDDVIQTSILCT-YGEFGCLDDAR 150
           + +F     L+ C + GD   G  VHG +++  G  + D+   ++L   YG+ G L  AR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACG 207
           ++FD+M  R++VS+ +++ ++    D      +F  +  EG E +     TML LA A  
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA-- 174

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            + +   A  +H    +     +  +G+  I  YS C  +  AE  F  I ++    WTA
Sbjct: 175 -MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-CQIIRK 326
           M+SCY+ +   + A   F KM     +PN   L +VL +   L  +  GK +H C I  K
Sbjct: 234 MVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAI--K 291

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
            +     ++G AL++ YA+CG + +       I   +++  + +IS YA+   +++A EL
Sbjct: 292 TLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 351

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
            +++    ++P+ +S++S L AC N+  L  G QIH H IKI  + D FV ++L+D Y+K
Sbjct: 352 FLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAK 411

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C   + +  +F  ++  + V WN+++ GF Q+G   EA+++F +M    +   +VT+ + 
Sbjct: 412 CNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSV 471

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++AC++   +     +H  +       D  I  +L D YAKCG ++ A +VF  + ER++
Sbjct: 472 LRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 531

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW+A+I  Y +HGQ  DA  LF +M  S ++ N++TF+ +L  CS +G V  G   F++
Sbjct: 532 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591

Query: 626 MRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           MRI  G++P ++HY C+V LL R+G +  A + I  +P   +  +W ALL+ C IHK + 
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 651

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + +   +++      D   Y LLSN+YA  G+ D+   +R  M   G++KVPG S
Sbjct: 652 LGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 706



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/603 (25%), Positives = 307/603 (50%), Gaps = 9/603 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y ++G L S+R +FD   E +   +  L++ +     FE +  L+ ++  E   ++
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F+  ++L+   ++   G    VH    K G D +  + + ++  Y     + DA  VF+
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            +  +D V W+++++ Y +N       ++F  M   G +P+   + S+ +A   L S+  
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IHG  ++     +  +G + + MY+KCGD+  A   F  I        + MIS Y +
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD- 333
           S   ++A E F++++     PN  +L +VL +C  +  L  GK +H   I+  +G E D 
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK--IGHESDL 399

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++G AL++FYA+C  M    K+  ++ + N +SWN ++  +++ G+ +EAL +  +MQ  
Sbjct: 400 FVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA 459

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLA 452
            +     + +S L AC +  S++   QIH  + K     D  + +SLID Y+KCG+   A
Sbjct: 460 QMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ + ++ ++ WN++I G+  +G + +A+ LF +M  + +E +++TF+  +  CS+ 
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579

Query: 513 GQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTA-QRVFDSMSERNVVSWSA 570
           G +  G  +   + I +G++  +   T +  +  + G L  A Q + D  S  + + W A
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           ++    +H  +       +++L+  I+P +E T++ +    + +GS+++      +MR  
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILE--IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNI 697

Query: 630 GVE 632
           GV 
Sbjct: 698 GVR 700



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 241/507 (47%), Gaps = 17/507 (3%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           LI++Y+    +  +  VF+     D+ +W  ++ CY  N+  E +  ++ KM       +
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F   SVL+A   L  +  G+ +HG  IK   D +  +  ++L  Y + G + DAR  F+
Sbjct: 263 PFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE 322

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            +   DV+  S +I+ Y  +    +  ++F  ++R  V P+  ++ S+ +AC  +  L  
Sbjct: 323 MIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDF 382

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IH H ++   + D  +GN+ +  Y+KC D+ S+ + F  +      SW  ++  +++
Sbjct: 383 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ 442

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           SG  ++AL  F +M   +     +T  +VL +CA    +R    +HC I +     +   
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND-TV 501

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G +LI+ YA+CG + +  KV   + ER+I+SWN +IS YA  G + +ALEL  +M    
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIH-----GHVIKIDCKDEFVQSSLIDMYSKCGFK 449
           +  +  +  + LS C + G +  GL +       H IK   +     + ++ +  + G  
Sbjct: 562 VESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEH---YTCIVRLLGRAGRL 618

Query: 450 NLAYLLFERI-QQKSVVMWNSMI--CGFYQNGNSLEAINLFH-QMYLNCLEMDEVTFLTA 505
           N A      I    S ++W +++  C  ++N     A+  F  +  L     DE T++  
Sbjct: 619 NDALQFIGDIPSAPSAMVWRALLSSCIIHKN----VALGRFSAEKILEIEPQDETTYVLL 674

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRK 532
               +  G L++   +   + + GVRK
Sbjct: 675 SNMYAAAGSLDQVALLRKSMRNIGVRK 701



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 188/389 (48%), Gaps = 11/389 (2%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           +P     L++ YA+ G ++ +RL F+     D  + + +I  Y  +N  E++  L+ +++
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 356

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R     + +   SVL+AC+++  L  G+++H   IK G + D  +  +++  Y +   +D
Sbjct: 357 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
            + K+F  +   + VSW++I+  +  +    E L +F  M    +    VT  S+  AC 
Sbjct: 417 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 476

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
              S+R A  IH  + +     D  +GNS I  Y+KCG +  A + F  + +R   SW A
Sbjct: 477 STASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNA 536

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI-IRK 326
           +IS Y   G    ALE F +M +   E N IT + +L  C+  G +  G S+   + I  
Sbjct: 537 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDH 596

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNILSWNMLISE---YARKGMSKE 382
           G+ P  ++    ++      G++++  + I  I    + + W  L+S    +    + + 
Sbjct: 597 GIKPSMEHY-TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRF 655

Query: 383 ALELLVQMQ-----TWGLMPDSFSVASSL 406
           + E +++++     T+ L+ + ++ A SL
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAAAGSL 684



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 165/373 (44%), Gaps = 43/373 (11%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CTN+ +L    ++H H +  G   D      L++ YA+   + SS  +F + ++ +
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 429

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  +  +   EE++ ++ +M   Q   +   Y SVLRAC+S   +    ++H 
Sbjct: 430 EVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 489

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K  F+ D VI  S++ TY + G + DA KVF  +  RD++SW++II+ Y  +   ++
Sbjct: 490 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 549

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M +  VE + +T ++L   C     +      HG  L   ++ID  +      
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVCSSTGLVN-----HGLSLFDSMRIDHGI------ 598

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                              K     +T ++    R+G    AL+ F+   ++   P+ + 
Sbjct: 599 -------------------KPSMEHYTCIVRLLGRAGRLNDALQ-FIG--DIPSAPSAMV 636

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC---EKVI 356
              +L SC     +  G+    +I+      E  Y+   L   YA  G + +     K +
Sbjct: 637 WRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYV--LLSNMYAAAGSLDQVALLRKSM 694

Query: 357 HAIGERNI--LSW 367
             IG R +  LSW
Sbjct: 695 RNIGVRKVPGLSW 707


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 190/553 (34%), Positives = 311/553 (56%), Gaps = 6/553 (1%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P   T  +L + C     L   R++H  +  R +  +     +   MY KC     A R 
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML--EVKEEPNLITLITVLGSCAGLG 311
           F ++  R   +W A+++ Y R+G    A+E+ V+M   E  E P+ +TL++VL +CA   
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L   + VH   +R G+  E   +  A+++ Y +CG +     V   +  RN +SWN +I
Sbjct: 134 ALHACREVHAFALRAGLD-ELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMI 192

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA  G + EA+ L  +M   G+     SV ++L ACG +G L    ++H  ++++   
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS 252

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
               V ++LI  Y+KC   +LA  +F  +  +K+ + WN+MI GF QN    +A  LF +
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  +  D  T ++ I A ++I    + +W+H   I + + +D+Y+ TAL DMY+KCG 
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGR 372

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           +  A+R+FDS  +R+V++W+AMI  YG HG    A  LF++M  +G  PNE TF+++L A
Sbjct: 373 VSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAA 432

Query: 610 CSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSH+G V+EG+ YF +M+  +G+EP ++HY  MVDLL R+G ++ A+  I +MP     S
Sbjct: 433 CSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGIS 492

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           ++GA+L  C++HK +++ +   + +   G  +  Y+ LL+NIYA    W +  +VR+ ME
Sbjct: 493 VYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAME 552

Query: 729 VTGLKKVPGYSTI 741
             GL+K PG+S I
Sbjct: 553 KKGLQKTPGWSII 565



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 213/430 (49%), Gaps = 14/430 (3%)

Query: 2   PLFRSCTNLRKL----------TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLV 51
           P+ R+ T L KL            +HA L   GL  +  AST L   Y +      +R V
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 52  FDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA--TISNFIYPSVLRACSSLG 109
           FD     D   W  ++  Y  N     ++    +M  E+      +    SVL AC+   
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
            L +  +VH   ++ G D+   + T++L  Y + G ++ AR VFD M  R+ VSW+++I 
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
            Y DN + +E + +F  MV+EGV+    ++L+  +ACGEL  L   R +H  ++R  +  
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
           +  + N+ I  Y+KC     A + F ++  K+   SW AMI  + ++   + A   F +M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                 P+  TL++V+ + A +    + + +H   IR  +  +  Y+  ALI+ Y++CG+
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDV-YVLTALIDMYSKCGR 372

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +S   ++  +  +R++++WN +I  Y   G  + A+EL  +M+  G +P+  +  S L+A
Sbjct: 373 VSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAA 432

Query: 409 CGNVGSLQLG 418
           C + G +  G
Sbjct: 433 CSHAGLVDEG 442



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 178/355 (50%), Gaps = 6/355 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C + R L     +HA  L  GL      ST ++++Y + G++ ++R VFD     +
Sbjct: 125 VLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRN 184

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I  Y  N    E++ L+ +M++E   +++    + L+AC  LG L    +VH 
Sbjct: 185 SVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHE 244

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV-VSWSSIIASYFDNADVS 178
            +++ G   +  +  +++ TY +    D A +VF+++ ++   +SW+++I  +  N    
Sbjct: 245 LLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPE 304

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           +  ++F  M  E V PD  T++S+  A  ++     AR IHG+ +R ++  D  +  + I
Sbjct: 305 DAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALI 364

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKCG +  A R F     R   +W AMI  Y   G+ Q A+E F +M      PN  
Sbjct: 365 DMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNET 424

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSEC 352
           T ++VL +C+  G + EG+     + +  G+ P  ++ G  +++     GK+ E 
Sbjct: 425 TFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYG-TMVDLLGRAGKLDEA 478


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 218/787 (27%), Positives = 400/787 (50%), Gaps = 50/787 (6%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L +SC  +  +   + LH + L  G          L+  YA+ G+L     +F    + D
Sbjct: 45  LLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRD 104

Query: 60  SFMWAVLIKCYMWNNFFEESIL-LYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             +W +++         E  ++ L+  M +  +A  ++     VL  C+ L +  +G+ V
Sbjct: 105 PVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSV 163

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCL-DDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           H  +IK G +   +   +++  Y + G +  DA   F+++  +DVVSW+++IA + +N  
Sbjct: 164 HSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKF 223

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL---CSLRPARSIHGHVLRR-KIKIDGP 232
             E  K+FH+M++  ++P++ T+ S+   C  L      R  + +H HVLRR ++  D  
Sbjct: 224 TEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVS 283

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + NS +  Y + G +  AE  F  ++ R   SW A+I+ Y  +G + KALE F + + ++
Sbjct: 284 VINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLE 343

Query: 293 E-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +P+ +TL++VL +CA +  L+  K +H  IIR     E   +G AL+ FYA+C     
Sbjct: 344 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 403

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             +    I  ++++SWN ++  +   G     + LL  M   G+ PDS ++ + +     
Sbjct: 404 ALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAA 463

Query: 412 VGSLQLGLQIHGHVIKIDC----KDEFVQSSLIDMYSKCG--------FKNL-------- 451
           V  ++   + H + I+           + + ++D Y+KCG        F +L        
Sbjct: 464 VSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVT 523

Query: 452 ----------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
                           AY +F  + +  +  WN M+  + +N    +A++LFH++    +
Sbjct: 524 CNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGM 583

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + D VT ++ + AC+++  +   +  H  +I      D+ ++ A  DMY+KCG +  A +
Sbjct: 584 KPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYK 642

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +F S  ++++V ++AM+  + MHG   +A  +F  ML+ G+KP+ V    +L+ACSH+G 
Sbjct: 643 LFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGL 702

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V+EG   FN++ ++ G +P ++ YAC+VDLL+R G I+ A+  +  MP  AN +IWG LL
Sbjct: 703 VDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLL 762

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CR H  +++ + +   L    +++ G Y ++SN+YA +  WD   ++R +M    LKK
Sbjct: 763 GACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKK 822

Query: 735 VPGYSTI 741
             G S I
Sbjct: 823 PAGCSWI 829



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 179/631 (28%), Positives = 320/631 (50%), Gaps = 53/631 (8%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           I  ++L++C ++  +  G  +HG  +K G      +   +L  Y + G LD   K+F +M
Sbjct: 41  ILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEM 100

Query: 157 TSRDVVSWSSIIASYFD-NADVSEGLKMFHS--MVREGVEPDFVTMLSLAEACGELCSLR 213
             RD V W+ +++      +  +E +++F +  MV E  +P+ VT+  +   C  L    
Sbjct: 101 DQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA-KPNSVTIAIVLPVCARLRE-D 158

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS-AERTFVKIEKRCTTSWTAMISCY 272
             +S+H +V++  ++     GN+ I MY+KCG + S A   F +IE +   SW A+I+ +
Sbjct: 159 AGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGF 218

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL---GWLREGKSVHCQIIRKGMG 329
           + + + ++A + F  ML+   +PN  T+ ++L  CA L      R GK VHC ++R+   
Sbjct: 219 SENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMEL 278

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL--- 386
            E   +  +L+ FY   G+M + E +   +  R+++SWN +I+ YA  G   +ALEL   
Sbjct: 279 VEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSE 338

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYS 444
            + ++T  + PDS ++ S L AC +V +LQ+   IHG++I+     +D  V ++L+  Y+
Sbjct: 339 FISLET--IKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA 396

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KC +   A   F  I +K ++ WN+++  F ++G     +NL H M    +  D +T LT
Sbjct: 397 KCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILT 456

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRK---DIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            IQ  + + +++K K  H   I +G+ +      +   + D YAKCG+++ A  +F S+S
Sbjct: 457 IIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLS 516

Query: 562 E-RNVV-------------------------------SWSAMIDCYGMHGQLNDAASLFK 589
           E RNVV                               +W+ M+  Y  +   + A SLF 
Sbjct: 517 EKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFH 576

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           ++   G+KP+ VT M+IL AC+H  SV   +   +   I     D++     +D+ S+ G
Sbjct: 577 ELQGQGMKPDIVTIMSILPACAHMASVHMLR-QCHGYVIRACFNDVRLNGAFIDMYSKCG 635

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            + GA+K+  S P   +  ++ A++ G  +H
Sbjct: 636 SVFGAYKLFLSSP-QKDLVMFTAMVGGFAMH 665



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 155/583 (26%), Positives = 283/583 (48%), Gaps = 32/583 (5%)

Query: 179 EGLKMFHSMVR--EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           E L +F   VR   G +P+   + +L ++C  + ++R    +HG+ L+        L   
Sbjct: 20  EALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKG 79

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ----KALESFVKMLEVK 292
            + +Y+K G L    + F ++++R    W  ++S       FQ    + +  F  M  V 
Sbjct: 80  LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGL---AGFQSHEAEVMRLFRAMHMVN 136

Query: 293 E-EPNLITLITVLGSCAGLGWLRE--GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
           E +PN +T+  VL  CA    LRE  GKSVH  +I+ G+   +   G ALI  YA+CG +
Sbjct: 137 EAKPNSVTIAIVLPVCAR---LREDAGKSVHSYVIKSGL-ESHTLAGNALISMYAKCGLV 192

Query: 350 -SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
            S+     + I  ++++SWN +I+ ++    ++EA +L   M    + P+  ++AS L  
Sbjct: 193 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV 252

Query: 409 CGNV---GSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
           C ++      + G ++H HV++     +D  V +SL+  Y + G    A  LF  ++ + 
Sbjct: 253 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRD 312

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQ-MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           +V WN++I G+  NG  L+A+ LF + + L  ++ D VT ++ + AC+++  L+  K +H
Sbjct: 313 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 372

Query: 523 HKLISY-GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
             +I + G+R+D  +  AL   YAKC   Q A + F  +S ++++SW+A++D +   G  
Sbjct: 373 GYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCE 432

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILW---ACSHSGSVEEGKFYFNAMRIFGVEPDLQHY 638
               +L   ML  GI+P+ +T + I+    A S    V+E   Y     +   +      
Sbjct: 433 THLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLG 492

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
             M+D  ++ G+++ A  +  S+    N     ++++G       D    I   +S T  
Sbjct: 493 NGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSET-- 550

Query: 699 NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            D   + L+  +YAE    D+   +   ++  G+K  P   TI
Sbjct: 551 -DLTTWNLMVRVYAENDFPDQALSLFHELQGQGMK--PDIVTI 590


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 218/746 (29%), Positives = 385/746 (51%), Gaps = 38/746 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L+   ++HA +L  G  Y  +    T+L+  YA+  +L  + ++F   + 
Sbjct: 76  ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV 135

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA +I         E +++ + +M+  +    NF+ P+V +AC +L     G  V
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K G +    + +S+   YG+ G LDDA KVFD++  R+ V+W++++  Y  N   
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++F  M ++GVEP  VT+ +   A   +  +   +  H   +   +++D  LG S 
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSL 315

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y K G +  AE  F ++ ++   +W  +IS Y + G  + A+     M   K + + 
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL T++ + A    L+ GK V C  IR     +   L   +++ YA+CG + + +KV  
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI-VLASTVMDMYAKCGSIVDAKKVFD 434

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  E++++ WN L++ YA  G+S EAL L   MQ  G+ P+  +             + L
Sbjct: 435 STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT----------WNLIIL 484

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            L  +G V   + KD F+Q     M S     NL             + W +M+ G  QN
Sbjct: 485 SLLRNGQV--DEAKDMFLQ-----MQSSGIIPNL-------------ISWTTMMNGMVQN 524

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYI 536
           G S EAI    +M  + L  +  +   A+ AC+++  L  G+ +H  +I        + I
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
           +T+L DMYAKCGD+  A++VF S     +   +AMI  Y ++G L +A +L++ +   G+
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGL 644

Query: 597 KPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           KP+ +T  N+L AC+H+G + +  + + + +    ++P L+HY  MVDLL+ +G+ E A 
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           ++I  MPF  +  +  +L+  C   ++ +++  + ++L  +   ++G Y  +SN YA EG
Sbjct: 705 RLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +WDE  K+R +M+  GLKK PG S I
Sbjct: 765 SWDEVVKMREMMKAKGLKKKPGCSWI 790



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 4/309 (1%)

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--- 427
           +S   + G  KEAL L+ +M    L          L  C     L  G QIH  ++K   
Sbjct: 42  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
              ++E++++ L+  Y+KC    +A +LF +++ ++V  W ++I    + G    A+  F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            +M  N +  D        +AC  +     G+ VH  ++  G+   +++ ++L DMY KC
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G L  A +VFD + +RN V+W+A++  Y  +G+  +A  LF  M   G++P  VT    L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            A ++ G VEEGK       + G+E D      +++   + G IE A +M+    F  + 
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA-EMVFDRMFEKDV 340

Query: 668 SIWGALLNG 676
             W  +++G
Sbjct: 341 VTWNLIISG 349



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 3/222 (1%)

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E+    S   +   +    +NG   EA++L  +M    L +    +   +Q C     L 
Sbjct: 28  EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87

Query: 517 KGKWVHHKLISYG--VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
            GK +H +++  G    ++ YI+T L   YAKC  L+ A+ +F  +  RNV SW+A+I  
Sbjct: 88  TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
               G    A   F +ML++ I P+     N+  AC        G+     +   G+E  
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +   + + D+  + G ++ A K+   +P   N   W AL+ G
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVG 248


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 220/728 (30%), Positives = 355/728 (48%), Gaps = 46/728 (6%)

Query: 17  HAH-LLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           HAH +  T  H D  +   ++ +YA MG    +  +     +PD   W  L+  Y     
Sbjct: 84  HAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGM 143

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F + + L  +M R            +L+AC  L DL  G ++H   +K G + D    ++
Sbjct: 144 FRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSA 203

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  YG+   L+DA   F  M  R+ VSW ++IA    N     GL++            
Sbjct: 204 LVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCR--------- 254

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
                     C  +  L  AR +H H ++ K   D  +G + + +Y+K   L+ A R F 
Sbjct: 255 ----------CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFF 304

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +      +  AM+    R+G   +A++ F  M        +++L  V  +CA      E
Sbjct: 305 GLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACA------E 358

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
            K     +  +           A+++ Y +C  + E   V   + +R+ +SWN +I+   
Sbjct: 359 VKGFDVDVCVRN----------AILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALE 408

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           +    ++ +  L +M   G+  D F+  S L AC  + SL+ GL +HG  IK     D F
Sbjct: 409 QNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF 468

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V S+++DMY KCG    A  L +RI  + +V WNS+I GF  N  S EA   F +M    
Sbjct: 469 VSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMG 528

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ D  T+ T + +C+N+  +E GK +H ++I   +  D +I + L DMYAKCG++  +Q
Sbjct: 529 VKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQ 588

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F+ + + + VSW+AMI  Y +HGQ  +A  +F++   + + PN  TF+ +L ACSH G
Sbjct: 589 LMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVG 648

Query: 615 SVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            +++G  YF+ M   + +EP L+H+ACM       G  E A K I SMP  A+  IW  L
Sbjct: 649 LLDDGCRYFHLMTSRYKLEPQLEHFACM-------GPQE-ALKFIRSMPLEADAVIWKTL 700

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ C+I + ++V +T    +     +D+  Y LLSN+YAE G W +  + R +M    LK
Sbjct: 701 LSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLK 760

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 761 KEPGCSWI 768



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 266/529 (50%), Gaps = 39/529 (7%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C  L  L    ++HA  + TGL  D  A + L++ Y +  SL  +   F    E +
Sbjct: 169 LLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERN 228

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  +I   + N  +   + L                   L  C ++  L +  ++H 
Sbjct: 229 SVSWGAVIAGCVQNEQYMRGLEL-------------------LCRCKAITCLSTARQLHA 269

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK  F  D V+ T+I+  Y +   L DAR+ F  + +  V + ++++         +E
Sbjct: 270 HAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAE 329

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +++F  M R G+    V++  +  AC E+               +   +D  + N+ + 
Sbjct: 330 AMQLFQFMTRSGIGFGVVSLSGVFSACAEV---------------KGFDVDVCVRNAILD 374

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y KC  L+ A   F ++E+R + SW  +I+   ++  ++  +    +ML    E +  T
Sbjct: 375 LYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFT 434

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VL +CAGL  L  G  VH + I+ G+G +  ++   +++ Y +CG ++E  K+   I
Sbjct: 435 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDA-FVSSTVVDMYCKCGMITEALKLHDRI 493

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G + ++SWN +I+ ++    S+EA +   +M   G+ PD F+ A+ L +C N+ +++LG 
Sbjct: 494 GGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGK 553

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG +IK +   DEF+ S+L+DMY+KCG    + L+FE++Q+   V WN+MICG+  +G
Sbjct: 554 QIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHG 613

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
              EA+ +F +     +  +  TF+  ++ACS++G L+ G    H + S
Sbjct: 614 QGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTS 662



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/630 (24%), Positives = 287/630 (45%), Gaps = 74/630 (11%)

Query: 89  EQATISNFIYPSVLRACSSLGD--LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL 146
           + A ++   +  V + C+S G   L +G+  H R++  GF     +   +L  Y   G  
Sbjct: 23  QAAFLATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGA 82

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK------------------------ 182
             A  VFD M  RD VSW++++ +Y    D                              
Sbjct: 83  AHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRG 142

Query: 183 MFHSMV-------REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           MF  +V       R GV PD  T+  L +ACG L  L     IH   ++  +++D   G+
Sbjct: 143 MFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGS 202

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY KC  L  A   F  + +R + SW A+I     +G  Q   E +++ LE     
Sbjct: 203 ALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVI-----AGCVQN--EQYMRGLE----- 250

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
                  +L  C  +  L   + +H   I+     +   +G A+++ YA+   + +  + 
Sbjct: 251 -------LLCRCKAITCLSTARQLHAHAIKNKFSSDR-VVGTAIVDVYAKADSLVDARRA 302

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +    + + N ++    R G+  EA++L   M   G+     S++   SAC  V   
Sbjct: 303 FFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGF 362

Query: 416 QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            +              D  V+++++D+Y KC     AYL+F+ ++Q+  V WN++I    
Sbjct: 363 DV--------------DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALE 408

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           QN    + I   ++M  + +E D+ T+ + ++AC+ +  LE G  VH K I  G+  D +
Sbjct: 409 QNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF 468

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + + + DMY KCG +  A ++ D +  + +VSW+++I  + ++ Q  +A   F +MLD G
Sbjct: 469 VSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMG 528

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA- 654
           +KP+  T+  +L +C++  ++E GK     +    +  D    + +VD+ ++ G++  + 
Sbjct: 529 VKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQ 588

Query: 655 --FKMIHSMPFPANGSIWGALLNGCRIHKR 682
             F+ +  + F +    W A++ G  +H +
Sbjct: 589 LMFEKVQKLDFVS----WNAMICGYALHGQ 614


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 210/645 (32%), Positives = 350/645 (54%), Gaps = 9/645 (1%)

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVV 162
           C+   ++  G  +H RI+K G      +  + L  Y +   L  A  +FD +    +D V
Sbjct: 21  CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80

Query: 163 SWSSIIASYFDNADVSE---GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSI 218
           SW+S+I ++  N   S     + +F  M+R   V P+  T+  +  A   L  +   +  
Sbjct: 81  SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H   ++     D  +G+S + MY K G +  A + F ++ +R T SW  MIS Y  S   
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
            KA+E F  M   +E  N   L +VL +     ++  G+ VH   I+ G+      +  A
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVS-VANA 259

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L+  YA+CG + +  +     G++N ++W+ +++ YA+ G S +AL+L  +M + G++P 
Sbjct: 260 LVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPS 319

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFE 457
            F++   ++AC ++ ++  G Q+H    K+    + +V S+++DMY+KCG    A   FE
Sbjct: 320 EFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFE 379

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +QQ  VV+W S+I G+ QNG+    +NL+ +M +  +  +E+T  + ++ACS++  L++
Sbjct: 380 CVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQ 439

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H ++I YG + ++ I +AL+ MY KCG L     +F  M  R+V+SW+AMI     
Sbjct: 440 GKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQ 499

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQ 636
           +G  N A  LF++ML  GIKP+ VTF+N+L ACSH G V+ G  YF  M   F + P ++
Sbjct: 500 NGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVE 559

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HYACMVD+LSR+G +  A + I S        +W  LL  C+ H+  ++     ++L   
Sbjct: 560 HYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVEL 619

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G+ ++  Y LLS+IY   G+ +   +VR IM+  G+ K PG S I
Sbjct: 620 GSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWI 664



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/562 (29%), Positives = 293/562 (52%), Gaps = 11/562 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KEPDSFMWAVL 66
           N+ K   LHA +L TG       +   +  YA+   L  +  +FD+    + D   W  L
Sbjct: 26  NILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSL 85

Query: 67  IKCYMWNNFFEE---SILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRII 122
           I  +  N+       +I L+ +M+R    I N      V  A S+L D+ +G++ H   +
Sbjct: 86  INAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAV 145

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G   D  + +S+L  Y + G + DARK+FD+M  R+ VSW+++I+ Y  +    + ++
Sbjct: 146 KTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVE 205

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M RE    +   + S+  A      +   R +H   ++  +     + N+ + MY+
Sbjct: 206 VFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYA 265

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG L  A RTF     + + +W+AM++ Y + G   KAL+ F KM      P+  TL+ 
Sbjct: 266 KCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVG 325

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           V+ +C+ L  + EGK +H    + G G +  Y+  A+++ YA+CG +++  K    + + 
Sbjct: 326 VINACSDLCAVVEGKQMHSFAFKLGFGLQL-YVLSAVVDMYAKCGSLADARKGFECVQQP 384

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++ W  +I+ Y + G  +  L L  +MQ   ++P+  ++AS L AC ++ +L  G Q+H
Sbjct: 385 DVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMH 444

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
             +IK   K E  + S+L  MY+KCG  +  YL+F R+  + V+ WN+MI G  QNG+  
Sbjct: 445 ARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGN 504

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTA 539
           +A+ LF +M L  ++ D VTF+  + ACS++G +++G W + K++   + +   +     
Sbjct: 505 KALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRG-WEYFKMMFDEFNIAPMVEHYAC 563

Query: 540 LTDMYAKCGDLQTAQRVFDSMS 561
           + D+ ++ G L  A+   +S +
Sbjct: 564 MVDILSRAGKLNEAKEFIESAT 585



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 154/616 (25%), Positives = 287/616 (46%), Gaps = 55/616 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F + +NL  +    + H+  + TG   D    + L+  Y + G +  +R +FD   E +
Sbjct: 124 VFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERN 183

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  WA +I  Y  ++  ++++ ++  M RE+   + F   SVL A +S   + +G +VH 
Sbjct: 184 TVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS 243

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK G      +  +++  Y + G LDDA + F+    ++ ++WS+++  Y    D  +
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK 303

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F+ M   GV P   T++ +  AC +LC++   + +H    +    +   + ++ + 
Sbjct: 304 ALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVD 363

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG L  A + F  +++     WT++I+ Y ++G ++  L  + KM   +  PN +T
Sbjct: 364 MYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELT 423

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +VL +C+ L  L +GK +H +II+ G   E   +G AL   Y +CG + +   +   +
Sbjct: 424 MASVLRACSSLAALDQGKQMHARIIKYGFKLEVP-IGSALSAMYTKCGSLDDGYLIFWRM 482

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+++SWN +IS  ++ G   +ALEL  +M   G+ PD  +  + LSAC ++G +  G 
Sbjct: 483 PSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGW 542

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +    +      DEF  + +++ Y+ C    L                 S      +   
Sbjct: 543 EYFKMMF-----DEFNIAPMVEHYA-CMVDIL-----------------SRAGKLNEAKE 579

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV-RKDIYIDT 538
            +E+  + H +   CL      +   + AC N    E G +   KL+  G      Y+  
Sbjct: 580 FIESATVDHGL---CL------WRILLGACKNHRNYELGVYAGEKLVELGSPESSAYV-- 628

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNV-----VSW---SAMIDCY----GMHGQLNDA-- 584
            L+ +Y   GD +  +RV   M  R V      SW     ++  +      H Q+++   
Sbjct: 629 LLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRL 688

Query: 585 --ASLFKQMLDSGIKP 598
               L K M+D G +P
Sbjct: 689 ELELLTKLMIDEGYQP 704


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 199/661 (30%), Positives = 361/661 (54%), Gaps = 9/661 (1%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS-----ILCTYGE 142
           R+Q ++      +      S  +L     +H  ++  GF +     +S     ++  Y  
Sbjct: 20  RQQHSLPIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVN 79

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           FG L  A   F  +  + +++W++I+         ++ +  +HSM++ GV PD  T   +
Sbjct: 80  FGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLV 139

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            +AC  L +L+  R +H   +  K K +  +  + I M++KCG +  A R F ++  R  
Sbjct: 140 LKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDL 198

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SWTA+I     +G   +AL  F KM      P+ + + ++L +C  L  ++ G ++   
Sbjct: 199 ASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVC 258

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            +R G   +  Y+  A+I+ Y +CG   E  +V   +   +++SW+ LI+ Y++  + +E
Sbjct: 259 AVRSGFESDL-YVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQE 317

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           + +L + M   GL  ++    S L A G +  L+ G ++H  V+K     D  V S+LI 
Sbjct: 318 SYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIV 377

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY+ CG    A  +FE    K +++WNSMI G+   G+   A   F +++      + +T
Sbjct: 378 MYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFIT 437

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            ++ +  C+ +G L +GK +H  +   G+  ++ +  +L DMY+KCG L+  ++VF  M 
Sbjct: 438 VVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMM 497

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
            RNV +++ MI   G HGQ     + ++QM + G +PN+VTF+++L ACSH+G ++ G  
Sbjct: 498 VRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWL 557

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            +N+M   +G+EP+++HY+CMVDL+ R+GD++GA+K I  MP   + +++G+LL  CR+H
Sbjct: 558 LYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLH 617

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
            ++++ + + + +     +D+G+Y LLSN+YA    W++  KVRS+++  GL+K PG S 
Sbjct: 618 NKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSW 677

Query: 741 I 741
           I
Sbjct: 678 I 678



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 173/568 (30%), Positives = 300/568 (52%), Gaps = 17/568 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDP--PAST----RLIESYAEMGSLRSSRLVFDTFKE 57
            +S  NL +   LHA LLV G  + P  P S+    +L+  Y   GSL+ + L F     
Sbjct: 37  LKSPPNLHEARTLHALLLVLGF-FQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPH 95

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W  +++  +    F ++I  YH M++   T  N+ YP VL+ACSSL  L  G  V
Sbjct: 96  KPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWV 155

Query: 118 HGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           H  +   G  K +V +Q +++  + + G ++DAR++F++M  RD+ SW+++I     N +
Sbjct: 156 HETM--HGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGE 213

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E L +F  M  EG+ PD V + S+  ACG L +++   ++    +R   + D  + N+
Sbjct: 214 CLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNA 273

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY KCGD L A R F  +      SW+ +I+ Y+++  +Q++ + ++ M+ V    N
Sbjct: 274 VIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATN 333

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            I   +VL +   L  L++GK +H  ++++G+  +   +G ALI  YA CG + E E + 
Sbjct: 334 AIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDV-VVGSALIVMYANCGSIKEAESIF 392

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL--MPDSFSVASSLSACGNVGS 414
               +++I+ WN +I  Y   G  + A       + WG    P+  +V S L  C  +G+
Sbjct: 393 ECTSDKDIMVWNSMIVGYNLVGDFESA--FFTFRRIWGAEHRPNFITVVSILPICTQMGA 450

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L+ G +IHG+V K     +  V +SLIDMYSKCGF  L   +F+++  ++V  +N+MI  
Sbjct: 451 LRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISA 510

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRK 532
              +G   + +  + QM       ++VTF++ + ACS+ G L++G  +++ +I+ YG+  
Sbjct: 511 CGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEP 570

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           ++   + + D+  + GDL  A +    M
Sbjct: 571 NMEHYSCMVDLIGRAGDLDGAYKFITRM 598



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 100/206 (48%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       L++   +H  +L  GL  D    + LI  YA  GS++ +  +F+   + D 
Sbjct: 341 LPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDI 400

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +W  +I  Y     FE +   + ++   +   +     S+L  C+ +G L  G+++HG 
Sbjct: 401 MVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGY 460

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           + K G   +  +  S++  Y + G L+   KVF +M  R+V +++++I++   +    +G
Sbjct: 461 VTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKG 520

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC 206
           L  +  M  EG  P+ VT +SL  AC
Sbjct: 521 LAFYEQMKEEGNRPNKVTFISLLSAC 546


>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
 gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
          Length = 623

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 196/617 (31%), Positives = 337/617 (54%), Gaps = 6/617 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L+   +   L  G +VH ++I  G D D  +   ++  YG  G LDDAR  F  + 
Sbjct: 5   YEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIH 64

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+V SW+ +I+    N + SEGL++   M  EG E + +T +SL  AC     L   + 
Sbjct: 65  QRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKK 124

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  V  + ++ D   GN+ + MY+ C  L  A   F ++  R   SWT +IS Y  +G+
Sbjct: 125 IHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGY 184

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +AL+ + +M +    P+ +TLI+VL +CA L  L EGK++H +I+  G+  +  ++G 
Sbjct: 185 PLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDV-FVGT 243

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A++ FY +C  + +  +V   I +++I+ WN +I  YA+    ++A  L ++M    + P
Sbjct: 244 AVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRP 303

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCG-FKNLAYLL 455
           +  ++ + L +C +   ++ G  +H             V ++LI+MY+KCG  +N   + 
Sbjct: 304 NDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVF 363

Query: 456 FERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
            E   + + V+ WN+MI    Q   +LEA+ ++H+M    ++  +VT+ T +  C+N G 
Sbjct: 364 IEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGD 423

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
              G+ VH + ++ G   D+ +  +L  +Y  CG+L+ AQ  F+S++ +NVVSWS+++  
Sbjct: 424 FTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAA 482

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEP 633
           Y  +G+ + A +LF  M   G+ PN VTF ++L ACSH+G  +EG  YF +M+    +EP
Sbjct: 483 YARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEP 542

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             +HY CMV+LL++SG ++ A   + +MP   + S W +LL  C +H   +      K+L
Sbjct: 543 TPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQL 602

Query: 694 SVTGTNDNGYYTLLSNI 710
                 ++  Y LL NI
Sbjct: 603 LDAEPRNSAAYVLLYNI 619



 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 170/589 (28%), Positives = 295/589 (50%), Gaps = 15/589 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H+ ++  GL  D      L++ Y   GSL  +R  F    + + F W +LI   + N 
Sbjct: 23  RVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQNG 82

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E + L   M  E    +   + S+L ACS  GDL  G+K+H R+   G + D +   
Sbjct: 83  EASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGN 142

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++L  Y     LD+AR VF++M  RDVVSW+ II++Y       E L+++  M +E   P
Sbjct: 143 ALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRP 202

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D VT++S+ EAC  L +L   ++IH  ++   ++ D  +G + +  Y KC  +  A + F
Sbjct: 203 DAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVF 262

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +I  +    W AMI  Y ++   +KA   +++M+E +  PN +TLIT+L SC+    + 
Sbjct: 263 DRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKME 322

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER--NILSWNMLIS 372
            G S+H +   +G       +  ALI  YA+CG +    +V      R  N+++WN +I 
Sbjct: 323 RGSSLHREAAARGYLSHTSVVN-ALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIV 381

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
             A++ ++ EAL++  +M   G+     +  + L+ C N G    G ++H   +   C  
Sbjct: 382 ANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCS 441

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           + VQ+SLI +Y  CG    A   FE +  K+VV W+S++  + +NG    A NLF  M  
Sbjct: 442 DVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQ 501

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA------LTDMYAK 546
           + +  + VTF + + ACS+ G  ++G W +       ++ D +++        + ++ AK
Sbjct: 502 DGVLPNIVTFTSVLHACSHAGLADEG-WSYF----LSMQGDHHLEPTPEHYGCMVNLLAK 556

Query: 547 CGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            G ++ A     +M  + +  +W +++    +H      A   KQ+LD+
Sbjct: 557 SGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDA 605



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 228/428 (53%), Gaps = 8/428 (1%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T  +L +  G   SL   R +H  ++   +  D  LGN  + MY +CG L  A   F  I
Sbjct: 4   TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-EEPNLITLITVLGSCAGLGWLREG 316
            +R   SWT +IS   ++G   + LE  +K ++++  E N IT I++LG+C+  G L  G
Sbjct: 64  HQRNVFSWTILISLLVQNGEASEGLE-LLKFMDLEGTEANKITFISLLGACSVTGDLSLG 122

Query: 317 KSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           K +H ++  KG+  E D + G AL+  Y  C  + E   V   +  R+++SW ++IS YA
Sbjct: 123 KKIHERVRAKGL--ETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYA 180

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
             G   EAL+L  +M+     PD+ ++ S L AC ++ +L  G  IH  ++    + D F
Sbjct: 181 HAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVF 240

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V ++++  Y KC   + A  +F+RI  K +V WN+MI  + QN    +A  L+ +M  N 
Sbjct: 241 VGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQ 300

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  ++VT +T + +CS+  ++E+G  +H +  + G      +  AL +MYAKCG L+ A 
Sbjct: 301 MRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENAT 360

Query: 555 RVFDSMSER--NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           RVF   + R  NV++W+ MI          +A  ++ +M   GIK ++VT+  +L  C++
Sbjct: 361 RVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCAN 420

Query: 613 SGSVEEGK 620
            G    G+
Sbjct: 421 FGDFTTGR 428



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 6/211 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVF--DTF 55
           + L  SC++  K+ R   LH      G          LI  YA+ GSL ++  VF   T 
Sbjct: 309 ITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATN 368

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           +  +   W  +I      +   E++ +YH+M +E    S+  Y +VL  C++ GD  +G 
Sbjct: 369 RTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGR 428

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH R +  G    DV+Q S++C YG  G L+ A+  F+ + S++VVSWSSI+A+Y  N 
Sbjct: 429 EVHSRSLATGC-CSDVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNG 487

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
           +      +F +M ++GV P+ VT  S+  AC
Sbjct: 488 EEDRARNLFWTMNQDGVLPNIVTFTSVLHAC 518



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 84/163 (51%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T+   ++   N   L  G+ VH ++IS G+  D Y+   L  MY +CG L  A+  F  +
Sbjct: 4   TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            +RNV SW+ +I     +G+ ++   L K M   G + N++TF+++L ACS +G +  GK
Sbjct: 64  HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
                +R  G+E D+     ++++ +    ++ A  +   M F
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVF 166


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 186/529 (35%), Positives = 305/529 (57%), Gaps = 4/529 (0%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           + IH  +L   ++  G L    I   S  GD+  A + F  + +     W A+I  Y+R+
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
             FQ AL  +  M   +  P+  T   +L +C+GL  L+ G+ VH Q+ R G   +  ++
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV-FV 156

Query: 336 GPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
              LI  YA+C ++     V   +   ER I+SW  ++S YA+ G   EALE+   M+  
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKM 216

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
            + PD  ++ S L+A   +  L+ G  IH  V+K+  + E  +  SL  MY+KCG    A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
            +LF++++  ++++WN+MI G+ +NG + EAI++FH+M    +  D ++  +AI AC+ +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G LE+ + ++  +     R D++I +AL DM+AKCG ++ A+ VFD   +R+VV WSAMI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             YG+HG+  +A SL++ M   G+ PN+VTF+ +L AC+HSG V EG ++FN M    + 
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKIN 456

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P  QHYAC++DLL R+G ++ A+++I  MP     ++WGALL+ C+ H+ +++ +   ++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L     ++ G+Y  LSN+YA    WD   +VR  M+  GL K  G S +
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 284/568 (50%), Gaps = 50/568 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  S T+  +L ++HA LLV GL +     T+LI + +  G +  +R VFD    P  F 
Sbjct: 27  LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+ Y  NN F++++L+Y  M   + +  +F +P +L+ACS L  L  G  VH ++ 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEG 180
           + GFD D  +Q  ++  Y +   L  AR VF+   +  R +VSW++I+++Y  N +  E 
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++F  M +  V+PD+V ++S+  A   L  L+  RSIH  V++  ++I+  L  S   M
Sbjct: 207 LEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A+  F K++      W AMIS Y ++G+ ++A++ F +M+     P+ I++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            + + +CA +G L + +S++  + R     +  ++  ALI+ +A+CG +     V     
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDV-FISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +R+++ W+ +I  Y   G ++EA+ L   M+  G+ P+  +    L AC + G ++ G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 421 IHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQN 477
               +   KI+ + +   + +ID+  + G  + AY + + +  Q  V +W ++       
Sbjct: 446 FFNLMADHKINPQQQHY-ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL------- 497

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
                                       + AC     +E G++   +L S        ID
Sbjct: 498 ----------------------------LSACKKHRHVELGEYAAQQLFS--------ID 521

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNV 565
            + T  Y +  +L  A R++D ++E  V
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRV 549


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 215/665 (32%), Positives = 358/665 (53%), Gaps = 14/665 (2%)

Query: 81  LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY 140
           LL+  +  +++T+S      V   C+   D   G +VH + +K G      + TS++  Y
Sbjct: 84  LLHSSLQPDESTLS-----CVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMY 138

Query: 141 GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTML 200
            +   ++D R+VFD+M  R+VVSW+S++A Y  N       ++F  M  EGV P+  T+ 
Sbjct: 139 MKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVS 198

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           ++  A      +     +H  V++   +   P+ NS I +YS+ G L  A   F K+E R
Sbjct: 199 TVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR 258

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
              +W +MI+ Y R+G   +  E F KM     +P  +T  +V+ SCA L  L   K + 
Sbjct: 259 DWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQ 318

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGM 379
           C+ ++ G   +   +  AL+   ++C +M +   +   + E +N++SW  +IS   + G 
Sbjct: 319 CKALKSGFTTDQIVI-TALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGG 377

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSS 438
           + +A+ L  QM+  G+ P+ F+ ++ L+    V       ++H  VIK +  +   V ++
Sbjct: 378 NDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV----FVSEMHAEVIKTNYERSSSVGTA 433

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+D Y K G    A  +FE I+ K ++ W++M+ G+ Q G + EA  LFHQ+    ++ +
Sbjct: 434 LLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPN 493

Query: 499 EVTFLTAIQAC-SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           E TF + I AC S     E+GK  H   I   +   + + +AL  MYAK G++ +A  VF
Sbjct: 494 EFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVF 553

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
               ER++VSW++MI  Y  HGQ   A  +F +M    +  + VTF+ ++ AC+H+G VE
Sbjct: 554 KRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVE 613

Query: 618 EGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +G+ YFN+M     + P ++HY+CM+DL SR+G +E A  +I+ MPFP   ++W  LL  
Sbjct: 614 KGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGA 673

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
            R+H+ +++ +   ++L      D+  Y LLSN+YA  GNW E   VR +M+   +KK P
Sbjct: 674 ARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEP 733

Query: 737 GYSTI 741
           GYS I
Sbjct: 734 GYSWI 738



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/550 (28%), Positives = 287/550 (52%), Gaps = 9/550 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   +  GL       T L++ Y +  ++   R VFD   E +   W  L+  Y WN 
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNG 173

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            +     L+ +M  E    + +   +V+ A  + G +G G +VH  ++K GF++   +  
Sbjct: 174 LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFN 233

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y   G L DAR VFDKM  RD V+W+S+IA Y  N    E  ++F+ M   GV+P
Sbjct: 234 SLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKP 293

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
             +T  S+ ++C  L  L   + +    L+     D  +  + +V  SKC ++  A   F
Sbjct: 294 THMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLF 353

Query: 255 VKIEK-RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
             +E+ +   SWTAMIS   ++G   +A+  F +M     +PN  T   +L     + + 
Sbjct: 354 SLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL----TVHYP 409

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
                +H ++I+         +G AL++ Y + G   +  KV   I  +++++W+ +++ 
Sbjct: 410 VFVSEMHAEVIKTNY-ERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAG 468

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCKD 432
           YA+ G ++EA +L  Q+   G+ P+ F+ +S ++AC +   + + G Q H + IK+   +
Sbjct: 469 YAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNN 528

Query: 433 EF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
              V S+L+ MY+K G  + A+ +F+R +++ +V WNSMI G+ Q+G + +A+ +F +M 
Sbjct: 529 ALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQ 588

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
              +++D VTF+  I AC++ G +EKG+   + +I+ + +   +   + + D+Y++ G L
Sbjct: 589 KRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGML 648

Query: 551 QTAQRVFDSM 560
           + A  + + M
Sbjct: 649 EKAMGIINEM 658



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 271/556 (48%), Gaps = 23/556 (4%)

Query: 149 ARKVFDKMTSRDVV--SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
           A  +FDK+  R       + ++ SY  +    E L +F S++   ++PD  T+  +   C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
                 +  R +H   ++  +     +G S + MY K  ++    R F ++ +R   SWT
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           ++++ Y+ +G +    E F +M      PN  T+ TV+ +    G +  G  VH  +++ 
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G          +LI  Y+  G + +   V   +  R+ ++WN +I+ Y R G   E  E+
Sbjct: 224 GFEEAIPVFN-SLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
             +MQ  G+ P   + AS + +C ++  L L   +    +K     D+ V ++L+   SK
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSK 342

Query: 446 CGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           C   + A  LF  +++ K+VV W +MI G  QNG + +A+NLF QM    ++ +  T+  
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +     +   E    +H ++I     +   + TAL D Y K G+   A +VF+ +  ++
Sbjct: 403 ILTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC-SHSGSVEEGKFYF 623
           +++WSAM+  Y   G+  +AA LF Q++  GIKPNE TF +++ AC S + + E+GK  F
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGK-QF 517

Query: 624 NAMRIFGVEPDLQHYAC----MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           +A   + ++  L +  C    +V + ++ G+I+ A ++        +   W ++++G   
Sbjct: 518 HA---YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQ 573

Query: 680 H----KRIDVMKTIEK 691
           H    K ++V   ++K
Sbjct: 574 HGQAKKALEVFDEMQK 589



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 101/195 (51%), Gaps = 1/195 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           ++ +HA ++ T         T L+++Y ++G+   +  VF+  +  D   W+ ++  Y  
Sbjct: 412 VSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQ 471

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSS-LGDLGSGEKVHGRIIKCGFDKDDV 131
               EE+  L+H++I+E    + F + SV+ AC+S       G++ H   IK   +    
Sbjct: 472 TGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALC 531

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + ++++  Y + G +D A +VF +   RD+VSW+S+I+ Y  +    + L++F  M +  
Sbjct: 532 VSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRN 591

Query: 192 VEPDFVTMLSLAEAC 206
           ++ D VT + +  AC
Sbjct: 592 MDVDAVTFIGVITAC 606



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 8/234 (3%)

Query: 450 NLAYLLFERIQQKSVVM--WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
           ++A+ LF++I  +   +   N ++  + ++  + EA+NLF  +  + L+ DE T      
Sbjct: 42  HIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFN 101

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            C+     + G+ VH + + +G+   + + T+L DMY K  ++   +RVFD M ERNVVS
Sbjct: 102 ICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVS 161

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W++++  Y  +G       LF QM   G+ PN  T   ++ A  + G V  G    +AM 
Sbjct: 162 WTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG-LQVHAMV 220

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA----NGSIWGALLNG 676
           +  G E  +  +  ++ L SR G +  A  +   M        N  I G + NG
Sbjct: 221 VKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNG 274


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 201/586 (34%), Positives = 327/586 (55%), Gaps = 9/586 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           MT R +  W++++ S        E L  F  M R+  +PD  T+    +ACGEL  +   
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 216 RSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             IHG V ++ + +   L  G+S I MY KCG ++ A R F ++EK    +W++M+S + 
Sbjct: 61  EMIHGFV-KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 119

Query: 274 RSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           ++G   +A+E F +M+   +  P+ +TLIT++ +C  L   R G+ VH  +IR+G   + 
Sbjct: 120 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 179

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             +  +L+  YA+     E   +   I E++++SW+ +I+ Y + G + EAL +   M  
Sbjct: 180 SLVN-SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 238

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL 451
            G  P+  +V   L AC     L+ G + H   I+   + E  V ++L+DMY KC     
Sbjct: 239 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 298

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLEMDEVTFLTAIQACS 510
           AY +F RI +K VV W ++I GF  NG +  +I  F  M L N    D +  +  + +CS
Sbjct: 299 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 358

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G LE+ K  H  +I YG   + +I  +L ++Y++CG L  A +VF+ ++ ++ V W++
Sbjct: 359 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 418

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           +I  YG+HG+   A   F  M+ S  +KPNEVTF++IL ACSH+G + EG   F  M   
Sbjct: 419 LITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVND 478

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           + + P+L+HYA +VDLL R GD++ A ++   MPF     I G LL  CRIH+  ++ +T
Sbjct: 479 YRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAET 538

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           + K+L    +N  GYY L+SN+Y  +G W+   K+R+ ++  G+KK
Sbjct: 539 VAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 584



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 265/509 (52%), Gaps = 13/509 (2%)

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + W  L+K       +EE +  +  M R++    NF  P  L+AC  L ++  GE +HG 
Sbjct: 7   YQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGF 66

Query: 121 IIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + K      D  + +S++  Y + G + +A ++FD++   D+V+WSS+++ +  N    +
Sbjct: 67  VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ 126

Query: 180 GLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            ++ F  MV    V PD VT+++L  AC +L + R  R +HG V+RR    D  L NS +
Sbjct: 127 AVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLL 186

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             Y+K      A   F  I ++   SW+ +I+CY ++G   +AL  F  M++   EPN+ 
Sbjct: 187 NCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVA 246

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++ VL +CA    L +G+  H   IRKG+  E   +  AL++ Y +C    E   V   
Sbjct: 247 TVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK-VSTALVDMYMKCFSPEEAYAVFSR 305

Query: 359 IGERNILSWNMLISEYARKGMSKEALE----LLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           I  ++++SW  LIS +   GM+  ++E    +L++  T    PD+  +   L +C  +G 
Sbjct: 306 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT---RPDAILMVKVLGSCSELGF 362

Query: 415 LQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L+     H +VIK     + F+ +SL+++YS+CG    A  +F  I  K  V+W S+I G
Sbjct: 363 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 422

Query: 474 FYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVR 531
           +  +G   +A+  F+ M  +  ++ +EVTFL+ + ACS+ G + +G  +   +++ Y + 
Sbjct: 423 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 482

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            ++     L D+  + GDL TA  +   M
Sbjct: 483 PNLEHYAVLVDLLGRVGDLDTAIEITKRM 511



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 231/469 (49%), Gaps = 17/469 (3%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    + LI  Y + G +  +  +FD  ++PD   W+ ++  +  N    +++  + +M+
Sbjct: 76  DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 135

Query: 88  -REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL 146
                T       +++ AC+ L +   G  VHG +I+ GF  D  +  S+L  Y +    
Sbjct: 136 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 195

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            +A  +F  +  +DV+SWS++IA Y  N   +E L +F+ M+ +G EP+  T+L + +AC
Sbjct: 196 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 255

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
                L   R  H   +R+ ++ +  +  + + MY KC     A   F +I ++   SW 
Sbjct: 256 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 315

Query: 267 AMISCYNRSGWFQKALESF-VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           A+IS +  +G   +++E F + +LE    P+ I ++ VLGSC+ LG+L + K  H  +I+
Sbjct: 316 ALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK 375

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G      ++G +L+E Y+ CG +    KV + I  ++ + W  LI+ Y   G   +ALE
Sbjct: 376 YGFDSN-PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 434

Query: 386 LLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS------ 438
               M ++  + P+  +  S LSAC + G +  GL+I     K+   D  +  +      
Sbjct: 435 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FKLMVNDYRLAPNLEHYAV 490

Query: 439 LIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNGNSLEAI 484
           L+D+  + G  + A  + +R+    +  +  +++  C  +QNG   E +
Sbjct: 491 LVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 539



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 166/321 (51%), Gaps = 5/321 (1%)

Query: 1   MPLFRSCTNLR--KLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +CT L   +L R +H  ++  G   D      L+  YA+  + + +  +F    E
Sbjct: 148 ITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE 207

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W+ +I CY+ N    E++L+++ M+ +    +      VL+AC++  DL  G K 
Sbjct: 208 KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT 267

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   I+ G + +  + T+++  Y +    ++A  VF ++  +DVVSW ++I+ +  N   
Sbjct: 268 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 327

Query: 178 SEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
              ++ F  M+ E    PD + M+ +  +C EL  L  A+  H +V++     +  +G S
Sbjct: 328 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 387

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EP 295
            + +YS+CG L +A + F  I  + T  WT++I+ Y   G   KALE+F  M++  E +P
Sbjct: 388 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 447

Query: 296 NLITLITVLGSCAGLGWLREG 316
           N +T +++L +C+  G + EG
Sbjct: 448 NEVTFLSILSACSHAGLIHEG 468


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 220/747 (29%), Positives = 375/747 (50%), Gaps = 21/747 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF---KEPDSFM 62
           +CT+LR  T LH+ L    L +DP AS  LI  Y + G    +  VF      +E D   
Sbjct: 242 ACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVS 301

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGSGEKVHGRI 121
           W  +I   +      +++ ++ ++  E    ++    ++L A ++ G D G+    HGRI
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRI 361

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEG 180
            + G+ +D VI  +I+  Y + G    A  VF ++  + DV+SW++++ +  D     + 
Sbjct: 362 WESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKV 421

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL-RRKIKIDGPLGNSFIV 239
           +  FH M+  G++P+ V+ +++  AC    +L   R IH  +L RR+  ++  +    + 
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVS 481

Query: 240 MYSKCGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           MY KCG +  AE  F  + +  R   +W  M+  Y ++   ++A  + ++ML+    P+ 
Sbjct: 482 MYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGM---GPEYDYLGPALIEFYAECGKMSECEK 354
           ++  +VL SC          S   Q++R  +   G     L  ALI  +  C ++ +   
Sbjct: 542 LSFTSVLSSCYC--------SQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARS 593

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V + +   +++SW  ++S  A     KE   L  +MQ  G++PD F++A++L  C    +
Sbjct: 594 VFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTT 653

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L LG  IH  V +I  + D  V+++L++MYS CG    A   FE ++ + +V WN M   
Sbjct: 654 LGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + Q G + EA+ LF QM L  ++ D++TF T +        +  GK  H      G+  D
Sbjct: 714 YAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSD 773

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + + T L  +YAKCG L  A  +F    +  VV  +A+I     HG   +A  +F +M  
Sbjct: 774 VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIE 652
            G++P+  T ++I+ AC H+G VEEG   F  M+  FG+ P L+HYAC VDLL R+G +E
Sbjct: 834 EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A ++I  MPF  N  +W +LL  C++    ++ +   + +     +++  + +LSNIY 
Sbjct: 894 HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             G W +    R  M    +K  PG S
Sbjct: 954 ATGKWKDADVDRKKMLDENVKNAPGMS 980



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/532 (29%), Positives = 272/532 (51%), Gaps = 27/532 (5%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L++C    DL  G+  H  I   G ++   +   ++  Y   G L++A  +F KM 
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPAR 216
            R+VVSW+++I++       +    +F +M+ E    P+  T++++  AC     L   R
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 217 SIHGHV----LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           SIH  +    L R       +GN+ I MY+KCG L  A   F+ I ++   SWTAM   Y
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 273 NRS-GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            +   ++  AL  F +ML     PN+IT IT LG+C     LR+G  +H  +    +G  
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEASLG-- 262

Query: 332 YDYLGP-ALIEFYAECGKMSECEKVIHAIGER---NILSWNMLISEYARKGMSKEALELL 387
           +D L   ALI  Y +CG       V  A+  R   +++SWN +IS     G   +A+ + 
Sbjct: 263 FDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVG-SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
            +++  G+ P+S ++ + L+A    G         HG + +    +D  + +++I MY+K
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAK 382

Query: 446 CGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           CGF + A+ +F RI+ K  V+ WN+M+       +  + +N FH M L  ++ ++V+F+ 
Sbjct: 383 CGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYID----TALTDMYAKCGDLQTAQRVFDSM 560
            + ACSN   L+ G+ +H  +++   R+  Y++    T L  MY KCG +  A+ VF  M
Sbjct: 443 ILNACSNSEALDFGRKIHSLILT---RRRDYVESSVATMLVSMYGKCGSISEAELVFKEM 499

Query: 561 --SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
               R++V+W+ M+  Y  + +  +A     +ML  G+ P+ ++F ++L +C
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 185/679 (27%), Positives = 313/679 (46%), Gaps = 28/679 (4%)

Query: 2   PLFRSCTNLRKLTR-LHAHLLVT--GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
            L +SC +   L +  HAH L+   GL         LI  Y   GSL  +  +F   +E 
Sbjct: 30  ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKV 117
           +   W  LI        F  +  L+  M+ E +   N +   ++L AC++  DL  G  +
Sbjct: 90  NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149

Query: 118 HGRIIKCGFDKDDVIQT----SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           H  I + G ++     T    +++  Y + G L+DA  VF  +  +DVVSW+++  +Y  
Sbjct: 150 HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQ 209

Query: 174 NADV-SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
                 + L++F  M+ + + P+ +T ++   AC    SLR    +H  +    +  D  
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEASLGFDPL 266

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCT---TSWTAMISCYNRSGWFQKALESFVKML 289
             N+ I MY KCGD   A   F  +  R      SW AMIS    +G    A+  F ++ 
Sbjct: 267 ASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 290 EVKEEPNLITLITVLGSCAGLGW-LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                PN +TLIT+L + A  G      +  H +I   G   +   +G A+I  YA+CG 
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDV-VIGNAIISMYAKCGF 385

Query: 349 MSECEKVIHAIGER-NILSWN-MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
            S    V   I  + +++SWN ML +   RK   K  +     M   G+ P+  S  + L
Sbjct: 386 FSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGK-VVNTFHHMLLAGIDPNKVSFIAIL 444

Query: 407 SACGNVGSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFER--IQQK 462
           +AC N  +L  G +IH  ++  + D  +  V + L+ MY KCG  + A L+F+   +  +
Sbjct: 445 NACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSR 504

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           S+V WN M+  + QN  S EA     +M    +  D ++F + + +C      ++ + + 
Sbjct: 505 SLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLR 561

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             ++  G R    ++TAL  M+ +C +L+ A+ VF+ M   +VVSW+AM+     +    
Sbjct: 562 MCILESGYRSAC-LETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFK 620

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
           +  +LF++M   G+ P++ T    L  C  S ++  GK     +   G+E D+     ++
Sbjct: 621 EVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALL 680

Query: 643 DLLSRSGDIEGAFKMIHSM 661
           ++ S  GD   A     +M
Sbjct: 681 NMYSNCGDWREALSFFETM 699



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 241/504 (47%), Gaps = 20/504 (3%)

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           VR     D     +L ++C +   L   +  H  +    ++    LGN  I MY +CG L
Sbjct: 17  VRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSL 76

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGS 306
             A   F K+E+R   SWTA+IS   + G F +A   F  M LE    PN  TL+ +L +
Sbjct: 77  EEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136

Query: 307 CAGLGWLREGKSVHCQIIRKGM---GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           CA    L  G+S+H  I   G+         +G A+I  YA+CG + +   V  AI E++
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKD 196

Query: 364 ILSWNMLISEYAR-KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           ++SW  +   YA+ +    +AL +  +M    L P+  +  ++L AC    SL+ G  +H
Sbjct: 197 VVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLH 253

Query: 423 GHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERI---QQKSVVMWNSMICGFYQNG 478
             + +     D    ++LI+MY KCG    AY +F+ +   Q+  +V WN+MI    + G
Sbjct: 254 SLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAG 313

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG-QLEKGKWVHHKLISYGVRKDIYID 537
              +A+ +F ++ L  +  + VT +T + A +  G      +  H ++   G  +D+ I 
Sbjct: 314 RHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIG 373

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            A+  MYAKCG    A  VF  +  + +V+SW+ M+             + F  ML +GI
Sbjct: 374 NAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM---RIFGVEPDLQHYACMVDLLSRSGDIEG 653
            PN+V+F+ IL ACS+S +++ G+   + +   R   VE  +     +V +  + G I  
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA--TMLVSMYGKCGSISE 491

Query: 654 AFKMIHSMPFPANGSI-WGALLNG 676
           A  +   MP P+   + W  +L  
Sbjct: 492 AELVFKEMPLPSRSLVTWNVMLGA 515


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 207/598 (34%), Positives = 329/598 (55%), Gaps = 15/598 (2%)

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACGE 208
           VFD+M  R+ VS+ ++I  Y  +    E  ++F  +  EG E +   F T+L L      
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKL------ 55

Query: 209 LCSLRPA---RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           L S+  A   R +HG VL+     +  +G + I  YS  G +  A   F +I  +   SW
Sbjct: 56  LVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSW 115

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           T MI+ Y  +  F +ALE F +M     +PN  T   VL +C GL     GK+VHC +++
Sbjct: 116 TGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLK 175

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
                +  Y+G  L+E Y  CG   +  +    + + +++ W+ +IS +A+ G S++ALE
Sbjct: 176 TNYERDL-YVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALE 234

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
           +  QM+   ++P+ F+ +S L A  ++ SL L   IHGH +K     D FV ++L+  Y+
Sbjct: 235 IFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYA 294

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    +  LFE +  ++ V WN++I  + Q G+   A++LF  M    ++  EVT+ +
Sbjct: 295 KCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSS 354

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            ++AC+ +  LE G  VH         +D+ +  AL DMYAKCG ++ A+ +FD +  R+
Sbjct: 355 ILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRD 414

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            VSW+A+I  Y MHG   +A  +F  M ++  KP+E+TF+ +L ACS++G ++EGK YF 
Sbjct: 415 KVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFT 474

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           +M+  +G+EP ++HY CMV L+ RSG+++ A K I  +PF  +  IW ALL  C IH  +
Sbjct: 475 SMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDV 534

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++ +   + +      D   + LLSNIYA    W     VR  M+  G+KK PG S I
Sbjct: 535 ELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWI 592



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 166/535 (31%), Positives = 290/535 (54%), Gaps = 4/535 (0%)

Query: 50  LVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
           +VFD   E ++  +  LI  Y  +N F E+  L+ ++  E   ++ F++ +VL+   S+ 
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
               G  VHG ++K G+  +  I T+++  Y   GC+  AR+VFD+++S+D+VSW+ +IA
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
           SY +N   SE L+ F  M   G +P+  T   + +AC  L +    +++H  VL+   + 
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           D  +G   + +Y++CGD   A R F  + K     W+ MIS + +SG  +KALE F +M 
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
                PN  T  +VL + A +  L   K++H   ++ G+  +  ++  AL+  YA+CG +
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDV-FVSNALMACYAKCGCI 299

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
            +  ++  A+ +RN +SWN +I  Y + G  + AL L   M  + +     + +S L AC
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359

Query: 410 GNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
             + +L+LGLQ+H    K I  +D  V ++LIDMY+KCG    A  +F+ +  +  V WN
Sbjct: 360 ATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWN 419

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS- 527
           ++ICG+  +G  +EAI +F+ M     + DE+TF+  + ACSN G+L++GK     +   
Sbjct: 420 AIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQD 479

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
           YG+   +   T +  +  + G+L  A +  + +  E +V+ W A++    +H  +
Sbjct: 480 YGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDV 534



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 201/405 (49%), Gaps = 1/405 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L  G   +    T LI++Y+  G +  +R VFD     D   W  +I  Y  N+ 
Sbjct: 68  VHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDC 127

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F E++  + +M       +NF +  VL+AC  L +  +G+ VH  ++K  +++D  +   
Sbjct: 128 FSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVG 187

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y   G  DDA + F  M   DV+ WS +I+ +  +    + L++F  M R  V P+
Sbjct: 188 LLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPN 247

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+ +A  ++ SL  +++IHGH L+  +  D  + N+ +  Y+KCG +  +   F 
Sbjct: 248 QFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFE 307

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   SW  +I  Y + G  ++AL  F  ML  + +   +T  ++L +CA L  L  
Sbjct: 308 ALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALEL 367

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  VHC   +   G +   +G ALI+ YA+CG + +   +   +  R+ +SWN +I  Y+
Sbjct: 368 GLQVHCLTAKTIYGQDV-AVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYS 426

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             G+  EA+++   M+     PD  +    LSAC N G L  G Q
Sbjct: 427 MHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 111/209 (53%)

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           ++F+ + +++ V + ++I G+ Q+   +EA  LF +++    E++   F T ++   ++ 
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
             E G+ VH  ++  G   + +I TAL D Y+  G +  A+ VFD +S +++VSW+ MI 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y  +   ++A   F QM  +G KPN  TF  +L AC    + + GK    ++     E 
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           DL     +++L +R GD + A++    MP
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMP 209



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 145/345 (42%), Gaps = 53/345 (15%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H H L  GL  D   S  L+  YA+ G +  S  +F+   + +   W  +I  Y+    
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E ++ L+  M+R Q   +   Y S+LRAC++L  L  G +VH    K  + +D  +  +
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G + DAR +FD +  RD VSW++II  Y  +    E +KMF+ M     +PD
Sbjct: 390 LIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPD 449

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHV-------------------------LRRKIKI- 229
            +T + +  AC     L   +     +                         L + +K  
Sbjct: 450 ELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFI 509

Query: 230 -DGPLGNSFIVMYSKCGDL----------LSAERTFVKIEKRCTTSWTAMISCYNRSG-W 277
            D P   S ++  +  G            +SA+R  +++E R   S   + + Y R+  W
Sbjct: 510 EDIPFEPSVMIWRALLGACVIHNDVELGRISAQRV-LELEPRDEASHVLLSNIYARARRW 568

Query: 278 FQKA-LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
              A +   +K   VK+EP             GL W+    +VHC
Sbjct: 569 GNVAYVRKHMKRKGVKKEP-------------GLSWIENQGNVHC 600


>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
 gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
          Length = 643

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 198/634 (31%), Positives = 340/634 (53%), Gaps = 9/634 (1%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           R+   I+   + S+LR C+S  DL + ++    I + GF  D  +   ++  YG+ G + 
Sbjct: 5   RDATAIAISSHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVR 64

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DAR+VFD++  R++ SW+ ++ +Y DN    E L +F  +   G+  D VT++S  +AC 
Sbjct: 65  DAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACA 124

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
               L   R IH        + +  +  + + MY KCG L  A+  F  + +R   SW A
Sbjct: 125 VAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNA 184

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           M++ Y ++G  ++A+  +  M     +P+  T ++VL    G G    G  +H Q++  G
Sbjct: 185 MLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEG--EHGTRIHDQVLESG 242

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL- 386
            G     L  AL+  Y   G++ +   V   I E+ ++SWN +++ YA+ G   +A++L 
Sbjct: 243 FGSN-TTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLF 301

Query: 387 --LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMY 443
             + +M+   + P+S +  + L AC   G L+ G +IH  V  +       V  +LI+MY
Sbjct: 302 WKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMY 361

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           S+CG   LA  +F+ +  K++V WN +I  +  +G+  EA+ +  +M L  L+ D+ TF+
Sbjct: 362 SECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFI 421

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF-DSMSE 562
           + + ACS    L +GK +H  + + G+ +D  I TAL ++Y KCG L+ A+ VF D  S 
Sbjct: 422 SVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSR 481

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KF 621
           RN+V+W++M+      G L D   +   M   GI P+E+TF+++L+ACSH GS+++G   
Sbjct: 482 RNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFACSHGGSIQQGLDL 541

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           + +A   +G+  + +HY C+VD+L R G +E A ++++ MPF AN   W  LL  CRIH+
Sbjct: 542 FLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHR 601

Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
             +  +     +      +   Y LLS +++  G
Sbjct: 602 DFEQGRRAADYVIELDPQNAAPYALLSTMFSVAG 635



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/586 (29%), Positives = 302/586 (51%), Gaps = 13/586 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R C + R LT   +    +   G   D      L+++Y + GS+R +R VFD  +  +
Sbjct: 18  ILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRN 77

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W +++  Y  N    E++ L+ ++      I N    S L+AC+  GDL  G  +H 
Sbjct: 78  IFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHA 137

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
                G++ + ++ T+++  YG+ G L++A+ VF  +  R+ VSW++++A+Y  N    E
Sbjct: 138 SARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEE 197

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            ++++  M  EG++PD  T +S+ +  G          IH  VL      +  L N+ + 
Sbjct: 198 AVRLYRLMCFEGIKPDATTFVSVLD--GWKGEGEHGTRIHDQVLESGFGSNTTLANALVS 255

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE---EPN 296
           MY   G +  A   F  I ++   SW AM++ Y ++G + KA++ F KM E++    EPN
Sbjct: 256 MYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPN 315

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +T + +L +CA  G+L  G+ +H ++   G+      +G ALI  Y+ECG +   + V 
Sbjct: 316 SVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLS-VGGALINMYSECGNLVLAKSVF 374

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
            ++  +N++SWN+LI  YA  G  KEAL +  +M+  GL PD F+  S L AC    +L 
Sbjct: 375 DSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALA 434

Query: 417 LGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGF 474
            G  IH  +      +DE + ++LI++Y KCG    A  +F  ++ ++++V WNSM+   
Sbjct: 435 EGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAA 494

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKD 533
              G   + + + H M L  +  DE+TFL+ + ACS+ G +++G        + YG+  +
Sbjct: 495 CTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATN 554

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
                 + D+  + G L+ AQ V + M  + N V+W  ++    +H
Sbjct: 555 TKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIH 600



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 42/436 (9%)

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++L  CA    L   K    +I R G G +  YLG  L++ Y +CG + +  +V   I  
Sbjct: 17  SILRDCASARDLTAAKQAQWEIARDGFGGDR-YLGNLLVQAYGKCGSVRDAREVFDRIQR 75

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           RNI SW +++  YA  G  +EAL L  ++Q+ G+  D+ ++ S+L AC   G L+ G  I
Sbjct: 76  RNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGI 135

Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H     +  + E  V ++L+ MY KCG    A  +F  + +++ V WN+M+  + QNG+ 
Sbjct: 136 HASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHC 195

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            EA+ L+  M    ++ D  TF++ +      G+ E G  +H +++  G   +  +  AL
Sbjct: 196 EEAVRLYRLMCFEGIKPDATTFVSVLDGWK--GEGEHGTRIHDQVLESGFGSNTTLANAL 253

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF---KQMLDSGIK 597
             MY   G +  A+ VFD ++E+ VVSW+AM+  Y  +G+   A  LF    +M  + ++
Sbjct: 254 VSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVE 313

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           PN VTF+N+L AC+ +G +E G+     +   G+   L     ++++ S  G++  A  +
Sbjct: 314 PNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSV 373

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
             S+P                 HK +                    + +L   YA +G+ 
Sbjct: 374 FDSVP-----------------HKNLV------------------SWNVLIGSYAGDGDG 398

Query: 718 DEFGKVRSIMEVTGLK 733
            E   V   ME+ GLK
Sbjct: 399 KEALGVHQKMELEGLK 414


>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
 gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 774

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 227/769 (29%), Positives = 387/769 (50%), Gaps = 81/769 (10%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI--KCYM-- 71
           +H  ++  G+  D     RL++ Y E G    +R VFD     D + W   +  +C +  
Sbjct: 28  IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87

Query: 72  ------------------WNN---------FFEESILLYHKMIREQATISNFIYPSVLRA 104
                             WNN         F E+++++Y +M+ +    S F   SVL A
Sbjct: 88  LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDARKVFDKMTSRDVVS 163
           CS + D   G + HG  +K G DK+  +  ++L  Y + G  +D   +VF+ ++  + VS
Sbjct: 148 CSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVS 207

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV---TMLSLA---EACGELCSL---RP 214
           ++++I        V E ++MF  M  +GV+ D V    +LS++   E C  L  +     
Sbjct: 208 YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNEL 267

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IH   LR     D  L NS + +Y+K  D+  AE  F ++ +    SW  MI  + +
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
                K++E   +M +   +PN +T I+VLG+C   G +  G+                 
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR----------------- 370

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
                              ++  +I + ++ +WN ++S Y+     +EA+    QMQ   
Sbjct: 371 -------------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAY 453
           L PD  +++  LS+C  +  L+ G QIHG VI+ +  K+  + S LI +YS+C    ++ 
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471

Query: 454 LLFER-IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSN 511
            +F+  I +  +  WNSMI GF  N    +A+ LF +M+    L  +E +F T + +CS 
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  L  G+  H  ++  G   D +++TALTDMY KCG++ +A++ FD++  +N V W+ M
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
           I  YG +G+ ++A  L+++M+ SG KP+ +TF+++L ACSHSG VE G    ++M RI G
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           +EP+L HY C+VD L R+G +E A K+  + P+ ++  +W  LL+ CR+H  + + + + 
Sbjct: 652 IEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVA 711

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++L       +  Y LLSN Y+    WD+   ++ +M    + K PG S
Sbjct: 712 EKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 159/633 (25%), Positives = 288/633 (45%), Gaps = 79/633 (12%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           SG+ +HG I++ G   D  +   +L  Y E G  D ARKVFD+M+ RDV SW++ +    
Sbjct: 24  SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83

Query: 173 DNADVSEGLKMFHSM---------------VREGVE----------------PDFVTMLS 201
              D+ E  ++F  M               VR+G E                P   T+ S
Sbjct: 84  KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS-AERTFVKIEKR 260
           +  AC ++         HG  ++  +  +  +GN+ + MY+KCG ++    R F  + + 
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA---GLGWLRE-- 315
              S+TA+I    R     +A++ F  M E   + + + L  +L   A   G   L E  
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263

Query: 316 ----GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
               GK +HC  +R G G +  +L  +L+E YA+   M+  E +   + E N++SWN++I
Sbjct: 264 GNELGKQIHCLALRLGFGGDL-HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             + ++  S +++E L +M+  G  P+  +  S L AC   G ++ G +I          
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI---------- 372

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
                                   F  I Q SV  WN+M+ G+    +  EAI+ F QM 
Sbjct: 373 ------------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              L+ D+ T    + +C+ +  LE GK +H  +I   + K+ +I + L  +Y++C  ++
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468

Query: 552 TAQRVFDS-MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWA 609
            ++ +FD  ++E ++  W++MI  +  +     A  LF++M  + +  PNE +F  +L +
Sbjct: 469 ISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           CS   S+  G+ +   +   G   D      + D+  + G+I+ A +   ++    N  I
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVI 587

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           W  +++G   + R D    + +++  +G   +G
Sbjct: 588 WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 620



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 179/376 (47%), Gaps = 15/376 (3%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           +RS  ++  LTR+      +G   +      ++ +    G + + R +F +  +P    W
Sbjct: 329 YRSDKSVEFLTRMRD----SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAW 384

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             ++  Y     +EE+I  + +M  +           +L +C+ L  L  G+++HG +I+
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDK-MTSRDVVSWSSIIASYFDNADVSEGLK 182
               K+  I + ++  Y E   ++ +  +FD  +   D+  W+S+I+ +  N   ++ L 
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504

Query: 183 MFHSMVREGV----EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           +F  M +  V    E  F T+LS   +C  LCSL   R  HG V++     D  +  +  
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLS---SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 561

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG++ SA + F  + ++ T  W  MI  Y  +G   +A+  + KM+   E+P+ I
Sbjct: 562 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 621

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           T ++VL +C+  G +  G  +   + R  G+ PE D+    +++     G++ + EK+  
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHY-ICIVDCLGRAGRLEDAEKLAE 680

Query: 358 AIGER-NILSWNMLIS 372
           A   + + + W +L+S
Sbjct: 681 ATPYKSSSVLWEILLS 696



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 5/209 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT-FKEP 58
           +  SC  LR L    ++H  ++ T +  +    + LI  Y+E   +  S  +FD    E 
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKV 117
           D   W  +I  +  N    ++++L+ +M +      N   + +VL +CS L  L  G + 
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K G+  D  ++T++   Y + G +D AR+ FD +  ++ V W+ +I  Y  N   
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 601

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            E + ++  M+  G +PD +T +S+  AC
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTAC 630


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 201/633 (31%), Positives = 343/633 (54%), Gaps = 8/633 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H + +K G   D  + T +   Y  +  L  A K+F++   + V  W++++ SYF   
Sbjct: 22  QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 176 DVSEGLKMFHSMVREGV---EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
              E L +FH M  + +    PD  T+    ++C  L  L   + IHG + ++KI  D  
Sbjct: 82  KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +G++ I +YSKCG +  A + F +  K+    WT++I+ Y ++G  + AL  F +M+ ++
Sbjct: 142 VGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 201

Query: 293 E-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           +  P+ +TL++   +CA L     G+SVH  + R+G   +   L  +++  Y + G +  
Sbjct: 202 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL-CLANSILNLYGKTGSIRS 260

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              +   +  ++I+SW+ +++ YA  G    AL L  +M    +  +  +V S+L AC +
Sbjct: 261 AANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS 320

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
             +L+ G  IH   +    + D  V ++L+DMY KC     A  LF R+ +K VV W  +
Sbjct: 321 SSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVL 380

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
             G+ + G + +++ +F  M       D +  +  + A S +G +++   +H  +   G 
Sbjct: 381 FSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGF 440

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             + +I  +L ++YAKC  +  A +VF  M  ++VV+WS++I  YG HGQ  +A  LF Q
Sbjct: 441 DNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQ 500

Query: 591 MLD-SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
           M + S +KPN+VTF++IL ACSH+G +EEG   F+ M   + + P+ +HY  MVDLL R 
Sbjct: 501 MSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRM 560

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G+++ A  MI+ MP  A   +WGALL  CRIH+ I + +     L +   N  GYYTLLS
Sbjct: 561 GELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLS 620

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           NIY  + NW +  K+R++++    KK+ G S +
Sbjct: 621 NIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMV 653



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 181/616 (29%), Positives = 321/616 (52%), Gaps = 17/616 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  +C +   + +LH+  L  GL +D    T+L   YA   SL  +  +F+       ++
Sbjct: 10  LLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYL 69

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQAT---ISNFIYPSVLRACSSLGDLGSGEKVHG 119
           W  L++ Y     + E++ L+H+M  +  T     N+     L++CS L  L  G+ +HG
Sbjct: 70  WNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHG 129

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + K   D D  + ++++  Y + G ++DA KVF +   +DVV W+SII  Y  N     
Sbjct: 130 FLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPEL 189

Query: 180 GLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L  F  M V E V PD VT++S A AC +L      RS+HG V RR       L NS +
Sbjct: 190 ALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSIL 249

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y K G + SA   F ++  +   SW++M++CY  +G    AL  F +M++ + E N +
Sbjct: 250 NLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRV 309

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIH 357
           T+I+ L +CA    L EGK +H   +  G   E D  +  AL++ Y +C        + +
Sbjct: 310 TVISALRACASSSNLEEGKHIHKLAVNYGF--ELDITVSTALMDMYMKCFSPKNAIDLFN 367

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +++++SW +L S YA  GM+ ++L +   M ++G  PD+ ++   L+A   +G +Q 
Sbjct: 368 RMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQ 427

Query: 418 GLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            L +H  V K     +EF+ +SLI++Y+KC   + A  +F+ +++K VV W+S+I  +  
Sbjct: 428 ALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGF 487

Query: 477 NGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
           +G   EA+ LF+QM  +  ++ ++VTF++ + ACS+ G +E+G  + H +++ Y +  + 
Sbjct: 488 HGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNT 547

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHG--QLNDAASLFKQM 591
                + D+  + G+L  A  + + M  +     W A++    +H   ++ + A+L   +
Sbjct: 548 EHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFL 607

Query: 592 LDSGIKPNEVTFMNIL 607
           LD    PN   +  +L
Sbjct: 608 LD----PNHAGYYTLL 619



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 237/468 (50%), Gaps = 9/468 (1%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           ++ L E C   CS      +H   L+  +  D  +     V+Y++   L  A + F +  
Sbjct: 7   LVKLLETC---CSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETP 63

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLE---VKEEPNLITLITVLGSCAGLGWLRE 315
            +    W A++  Y   G + + L  F +M      +E P+  T+   L SC+GL  L  
Sbjct: 64  CKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLEL 123

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +H  + +K +  +  ++G ALIE Y++CG+M++  KV     +++++ W  +I+ Y 
Sbjct: 124 GKMIHGFLKKKKIDNDM-FVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYE 182

Query: 376 RKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
           + G  + AL    +M     + PD  ++ S+ SAC  +    LG  +HG V +     + 
Sbjct: 183 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 242

Query: 435 -VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            + +S++++Y K G    A  LF  +  K ++ W+SM+  +  NG    A+NLF++M   
Sbjct: 243 CLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDK 302

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +E++ VT ++A++AC++   LE+GK +H   ++YG   DI + TAL DMY KC   + A
Sbjct: 303 RIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNA 362

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
             +F+ M +++VVSW+ +   Y   G  + +  +F  ML  G +P+ +  + IL A S  
Sbjct: 363 IDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSEL 422

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           G V++       +   G + +    A +++L ++   I+ A K+   M
Sbjct: 423 GIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGM 470


>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Brachypodium distachyon]
          Length = 779

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 219/720 (30%), Positives = 383/720 (53%), Gaps = 30/720 (4%)

Query: 47  SSRLVFDTF-KEPDSFMWAVLIKCYMWNNFFEESILLY---HKMIREQATISNFIYPSVL 102
           + RL+ D   + P + +  VL+  Y+     + ++ LY   +   R      ++ Y   L
Sbjct: 48  ARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALGLYGVLNHAARPPPRSDHYTYSCAL 107

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSIL-----CTYGEFGCLDDARKVFDK 155
            AC+    L  G  VH  +++      D  V++ S+L     C     G +D  R++FD 
Sbjct: 108 TACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDVVRRLFDA 167

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
              R+VVSW++++  Y       E L+MF  M+ +G+ P  V+ +++  A        P 
Sbjct: 168 TPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAASDDPSWPF 227

Query: 216 RSIHGHVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             ++G +++  ++   D  + +S I M+S+ GD+ SA   F    K+    W  MI+ Y 
Sbjct: 228 -FLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYV 286

Query: 274 RSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           ++G F +A++ F++++  K  P +++T ++ + + +     + G+ +H  ++ KGM    
Sbjct: 287 QNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLM-KGMRSTL 345

Query: 333 DY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              LG AL+  Y+ CG +     +   + E++I+SWN +++ + +     E L L+ QM 
Sbjct: 346 PVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMH 405

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
             G + D+ ++ + LSA  N G LQ+G Q HG++I+   + E ++S LI+MYSK G  ++
Sbjct: 406 KSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEGLESYLINMYSKSGHIDM 465

Query: 452 AYLLFERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           A  +F+     +  V WN+MI G+ Q+G   +A+  F  M    +E   VT  + + AC 
Sbjct: 466 AQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACE 525

Query: 511 NIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            +G+ ++ GK +H   + + +  +I++ TAL DMY+KCG++  A+ VFD M+E++ V+++
Sbjct: 526 PVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYT 585

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
            MI   G HG  + A  LF  M D+G+KP+ VTF+  + AC++SG V+EG   + +M  F
Sbjct: 586 TMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETF 645

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKR------ 682
           G+    QH+ C+VDLL+++G +E A+  + S+    N  +IWG+LL  C+   +      
Sbjct: 646 GLSATPQHHCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLASCKAQGKQELTAF 705

Query: 683 -IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             D +  IEK+    G    GY  LLS ++A EGNW     +R  M V GL+K  G S I
Sbjct: 706 VTDKLLNIEKQY---GHAHAGYNVLLSQLFAAEGNWSSADSLRREMRVRGLRKDVGSSWI 762



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 193/372 (51%), Gaps = 13/372 (3%)

Query: 15  RLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +LH +L+  G+    P      L+  Y+  G++ ++  +FD   E D   W  ++  ++ 
Sbjct: 332 QLHGYLM-KGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQ 390

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N+F  E +LL ++M +           +VL A S+ GDL  G++ HG +I+ G + +  +
Sbjct: 391 NDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEG-L 449

Query: 133 QTSILCTYGEFGCLDDARKVFDKM-TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           ++ ++  Y + G +D A++VFD     RD V+W+++IA Y  +    + +  F +MV  G
Sbjct: 450 ESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAG 509

Query: 192 VEPDFVTMLSLAEACGELC-SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           VEP  VT+ S+  AC  +   ++  + IH   LR  +  +  +G + + MYSKCG++ +A
Sbjct: 510 VEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAA 569

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
           E  F ++ ++ T ++T MIS   + G+  +AL  F  M +   +P+ +T +  + +C   
Sbjct: 570 ENVFDRMTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYS 629

Query: 311 GWLREGKSVHCQIIRKGMG--PEYDYLGPALIEFYAECGKMSECEKVIHAIGERN--ILS 366
           G + EG S++  +   G+   P++      +++  A+ G++ E    + ++GE    I  
Sbjct: 630 GLVDEGLSLYRSMETFGLSATPQHHC---CIVDLLAKAGRVEEAYDFVESLGEDGNFIAI 686

Query: 367 WNMLISEYARKG 378
           W  L++    +G
Sbjct: 687 WGSLLASCKAQG 698


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 203/643 (31%), Positives = 348/643 (54%), Gaps = 7/643 (1%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCG--FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           L+ C + GD  +G  VH R+++ G     D      +L  Y + G L  AR++FD M  R
Sbjct: 52  LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           + VS+ +++  Y    +  E L++F  + REG E +   + ++ +    + +   A  IH
Sbjct: 112 NRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIH 171

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
               +     +  +G + I  YS CG +  A   F  I  +   +WTAM+SCY+ +   +
Sbjct: 172 ACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPE 231

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-CQIIRKGMGPEYDYLGPA 338
            AL +F KM     +PN   L + L +   L     GK +H C +  K +     ++G A
Sbjct: 232 YALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSV--KTLYDTEPHVGGA 289

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L++ YA+CG + +   +   I   +++ W+ LIS YA+   +++A E+ ++M    ++P+
Sbjct: 290 LLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPN 349

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFE 457
            FS++  L AC N+  L+LG QIH   IK+  + E FV ++L+DMY+KC     +  +F 
Sbjct: 350 EFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFS 409

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +Q  + V WN++I G+ Q+G + +A+++FH+M    +   +VTF + ++AC+N   ++ 
Sbjct: 410 SLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKH 469

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
              +H  +       D  +  +L D YAKCG ++ A +VF+S+ E +VVSW+++I  Y +
Sbjct: 470 AVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYAL 529

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQ 636
           HG+  +A  LF +M  S IK N+VTF+++L  C  +G V +G + FN+M +   ++P ++
Sbjct: 530 HGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSME 589

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HY C+V LL R+G +  A K I  +P   +  +W ALL+ C +HK + + +   +++   
Sbjct: 590 HYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDI 649

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +D   Y LLSN+YA  G  DE    R  M   G+KK  G S
Sbjct: 650 EPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLS 692



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 166/625 (26%), Positives = 322/625 (51%), Gaps = 9/625 (1%)

Query: 16  LHAHLLVTG--LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +HA ++  G     D   +  L+  YA++G L ++R +FD   E +   +  L++ Y   
Sbjct: 67  VHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALR 126

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             FEE++ L+ ++ RE   +++F+  ++L+   ++   G    +H    K G D++  + 
Sbjct: 127 GEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVG 186

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           T+++  Y   G +  AR VFD +  +D V+W+++++ Y +N      L  F  M   G +
Sbjct: 187 TALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFK 246

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+   + S  +A   L S    + IHG  ++     +  +G + + MY+KCGD+  A   
Sbjct: 247 PNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAI 306

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I       W+ +IS Y +S   ++A E F++M+     PN  +L  VL +CA + +L
Sbjct: 307 FEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFL 366

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             G+ +H   I+ G   E  ++G AL++ YA+C  M    ++  ++ + N +SWN +I  
Sbjct: 367 ELGEQIHNLAIKLGYESEL-FVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVG 425

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KD 432
           Y + G +++AL +  +M+   ++    + +S L AC N  S++  +QIH  + K     D
Sbjct: 426 YCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNND 485

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V +SLID Y+KCGF   A  +FE I +  VV WNS+I  +  +G +  A+ LF +M  
Sbjct: 486 TIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNK 545

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK-LISYGVRKDIYIDTALTDMYAKCGDLQ 551
           + ++ ++VTF++ +  C + G + +G W+ +  ++ + ++  +   T +  +  + G L 
Sbjct: 546 SDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLT 605

Query: 552 TAQR-VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILWA 609
            A + + D  S  + + W A++    +H  +       +++LD  I+P +E T++ +   
Sbjct: 606 DALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLD--IEPHDETTYVLLSNM 663

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPD 634
            + +G ++E   +  +MR  GV+ +
Sbjct: 664 YAAAGILDEVALWRKSMRNVGVKKE 688



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C N+  L    ++H   +  G   +      L++ YA+  ++ +S  +F + ++ +
Sbjct: 356 VLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDAN 415

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  + F E+++ ++H+M       +   + SVLRAC++   +    ++H 
Sbjct: 416 EVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHS 475

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K  F+ D ++  S++ TY + G + DA KVF+ +   DVVSW+SII++Y  +   + 
Sbjct: 476 LIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATN 535

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACG 207
            L++F  M +  ++ + VT +SL   CG
Sbjct: 536 ALELFDRMNKSDIKANDVTFVSLLSVCG 563



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 9/295 (3%)

Query: 375 ARKGMSKEALELLVQMQTWGLMP--DSFSVASSLSACGNVGSLQLGLQIHGHVIK---ID 429
           +R   + EAL+ L        +P  DS++ A  L  C   G  + G  +H  V++   + 
Sbjct: 19  SRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVA 78

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D F  + L++ Y+K G    A  LF+ + +++ V + +++ G+   G   EA+ LF +
Sbjct: 79  QLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRR 138

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           +     E++     T ++    +        +H      G  ++ ++ TAL D Y+ CG 
Sbjct: 139 LQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGA 198

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           +  A+ VFD +  ++ V+W+AM+ CY  +     A + F +M  +G KPN     + L A
Sbjct: 199 VCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKA 258

Query: 610 --CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
             C  S  + +G    +   ++  EP +     ++D+ ++ GDIE A  +   +P
Sbjct: 259 AVCLSSALLGKGIHGCSVKTLYDTEPHVG--GALLDMYAKCGDIEDAHAIFEMIP 311



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 5/183 (2%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C N   ++   ++H+ +  +  + D      LI++YA+ G +R +  VF++  E D
Sbjct: 457 VLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECD 516

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +     ++ L+ +M +     ++  + S+L  C S G +  G  +  
Sbjct: 517 VVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFN 576

Query: 120 RIIKCGFDKDDVIQ-TSILCTYGEFGCLDDARK-VFDKMTSRDVVSWSSIIASYFDNADV 177
            ++     K  +   T I+   G  G L DA K + D  ++   + W ++++S   + +V
Sbjct: 577 SMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNV 636

Query: 178 SEG 180
           + G
Sbjct: 637 ALG 639


>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 211/752 (28%), Positives = 388/752 (51%), Gaps = 47/752 (6%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESIL-LYHKM-IREQAT 92
           L+  YA+ G+L     +F    + D  +W +++         E  ++ L+  M +  +A 
Sbjct: 19  LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAK 78

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL-DDARK 151
            ++     VL  C+ L +  +G+ VH  +IK G +   +   +++  Y + G +  DA  
Sbjct: 79  PNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYA 137

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL-- 209
            F+++  +DVVSW+++IA + +N    E  K+FH+M++  ++P++ T+ S+   C  L  
Sbjct: 138 AFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEE 197

Query: 210 -CSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
               R  + +H HVLRR ++  D  + NS +  Y + G +  AE  F  ++ R   SW A
Sbjct: 198 NAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNA 257

Query: 268 MISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           +I+ Y  +G + KALE F + + ++  +P+ +TL++VL +CA +  L+  K +H  IIR 
Sbjct: 258 IIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRH 317

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
               E   +G AL+ FYA+C       +    I  ++++SWN ++  +   G     + L
Sbjct: 318 PGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNL 377

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC----KDEFVQSSLIDM 442
           L  M   G+ PDS ++ + +     V  ++   + H + I+           + + ++D 
Sbjct: 378 LHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDA 437

Query: 443 YSKCG--------FKNL------------------------AYLLFERIQQKSVVMWNSM 470
           Y+KCG        F +L                        AY +F  + +  +  WN M
Sbjct: 438 YAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLM 497

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           +  + +N    +A++LFH++    ++ D VT ++ + AC+++  +   +  H  +I    
Sbjct: 498 VRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-AC 556

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             D+ ++ A  DMY+KCG +  A ++F S  ++++V ++AM+  + MHG   +A  +F  
Sbjct: 557 FNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSY 616

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           ML+ G+KP+ V    +L+ACSH+G V+EG   FN++ ++ G +P ++ YAC+VDLL+R G
Sbjct: 617 MLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGG 676

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            I+ A+  +  MP  AN +IWG LL  CR H  +++ + +   L    +++ G Y ++SN
Sbjct: 677 RIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSN 736

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +YA +  WD   ++R +M    LKK  G S I
Sbjct: 737 LYAADARWDGVMEIRRLMRTRELKKPAGCSWI 768



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 172/598 (28%), Positives = 304/598 (50%), Gaps = 53/598 (8%)

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD-NADVSEGLKMFHS-- 186
           D +   +L  Y + G LD   K+F +M  RD V W+ +++      +  +E +++F +  
Sbjct: 13  DSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMH 72

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           MV E  +P+ VT+  +   C  L      +S+H +V++  ++     GN+ I MY+KCG 
Sbjct: 73  MVNEA-KPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGL 130

Query: 247 LLS-AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           + S A   F +IE +   SW A+I+ ++ + + ++A + F  ML+   +PN  T+ ++L 
Sbjct: 131 VCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILP 190

Query: 306 SCAGL---GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
            CA L      R GK VHC ++R+    E   +  +L+ FY   G+M + E +   +  R
Sbjct: 191 VCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSR 250

Query: 363 NILSWNMLISEYARKGMSKEALEL---LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           +++SWN +I+ YA  G   +ALEL    + ++T  + PDS ++ S L AC +V +LQ+  
Sbjct: 251 DLVSWNAIIAGYASNGEWLKALELFSEFISLET--IKPDSVTLVSVLPACAHVHNLQVAK 308

Query: 420 QIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            IHG++I+     +D  V ++L+  Y+KC +   A   F  I +K ++ WN+++  F ++
Sbjct: 309 GIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTES 368

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK---DI 534
           G     +NL H M    +  D +T LT IQ  + + +++K K  H   I +G+ +     
Sbjct: 369 GCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGP 428

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVV--------------------------- 566
            +   + D YAKCG+++ A  +F S+SE RNVV                           
Sbjct: 429 TLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSE 488

Query: 567 ----SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
               +W+ M+  Y  +   + A SLF ++   G+KP+ VT M+IL AC+H  SV   +  
Sbjct: 489 TDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLR-Q 547

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            +   I     D++     +D+ S+ G + GA+K+  S P   +  ++ A++ G  +H
Sbjct: 548 CHGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGFAMH 604



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 183/700 (26%), Positives = 330/700 (47%), Gaps = 89/700 (12%)

Query: 7   CTNLRKLT--RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRS-SRLVFDTFKEPDSFMW 63
           C  LR+     +H++++ +GL     A   LI  YA+ G + S +   F+  +  D   W
Sbjct: 91  CARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSW 150

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS---GEKVHGR 120
             +I  +  N F EE+  L+H M++     +     S+L  C+SL +      G++VH  
Sbjct: 151 NAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCH 210

Query: 121 IIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +++     +DV +  S++  Y   G ++ A  +F  M SRD+VSW++IIA Y  N +  +
Sbjct: 211 VLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLK 270

Query: 180 GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSF 237
            L++F   +  E ++PD VT++S+  AC  + +L+ A+ IHG+++R   ++ D  +GN+ 
Sbjct: 271 ALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNAL 330

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y+KC    +A +TF+ I ++   SW A++  +  SG     +     ML     P+ 
Sbjct: 331 LSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDS 390

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGM--GPEYDYLGPALIEFYAECGKM------ 349
           IT++T++   A +  +++ K  H   IR G+  G     LG  +++ YA+CG M      
Sbjct: 391 ITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNI 450

Query: 350 ----SECEKVI----------------------HAIGERNILSWNMLISEYARKGMSKEA 383
               SE   V+                      + + E ++ +WN+++  YA      +A
Sbjct: 451 FGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQA 510

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
           L L  ++Q  G+ PD  ++ S L AC ++ S+ +  Q HG+VI+    D  +  + IDMY
Sbjct: 511 LSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRLNGAFIDMY 570

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           SKCG    AY LF    QK +VM+ +M+ GF  +G   EA+ +F  M    ++ D V   
Sbjct: 571 SKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIIT 630

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-- 561
             + ACS+ G +++G W                                  ++F+S+   
Sbjct: 631 AVLFACSHAGLVDEG-W----------------------------------KIFNSIEKV 655

Query: 562 ---ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
              +  +  ++ ++D     G++ DA +   +M    I+ N   +  +L AC     VE 
Sbjct: 656 HGFQPTMEQYACVVDLLARGGRIKDAYTFVTRM---PIEANANIWGTLLGACRTHHEVEL 712

Query: 619 GKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAFKM 657
           G+    A  +F +E D + +Y  M +L +     +G  ++
Sbjct: 713 GRVV--ADHLFKIESDNIGNYVVMSNLYAADARWDGVMEI 750



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR-KGM 379
           C    KG    YD L   L+  YA+ G +  C K+   + +R+ + WN+++S  A  +  
Sbjct: 5   CPFSSKG----YDSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSH 60

Query: 380 SKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQS 437
             E + L   M       P+S ++A  L  C  +     G  +H +VIK   +      +
Sbjct: 61  EAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGN 119

Query: 438 SLIDMYSKCGFK-NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           +LI MY+KCG   + AY  F RI+ K VV WN++I GF +N  + EA  LFH M    ++
Sbjct: 120 ALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQ 179

Query: 497 MDEVTFLTAIQACSNIGQ---LEKGKWVH-HKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            +  T  + +  C+++ +      GK VH H L    + +D+ +  +L   Y + G ++ 
Sbjct: 180 PNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEK 239

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACS 611
           A+ +F +M  R++VSW+A+I  Y  +G+   A  LF + +    IKP+ VT +++L AC+
Sbjct: 240 AEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACA 299

Query: 612 HSGSVEEGK 620
           H  +++  K
Sbjct: 300 HVHNLQVAK 308


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 185/547 (33%), Positives = 309/547 (56%), Gaps = 9/547 (1%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           S+ +ACG++   +  + IHG VL++ +  D  +GN+ ++MY +C  +  A   F K+ +R
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
              SW+ MI   +R+  F  ALE   +M  ++  P+ + +++++   A    +R GK++H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 321 CQIIRKGMGPEYDYLG----PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
             +IR       +++G     AL++ YA+CG +    ++ + + ++ ++SW  +I+   R
Sbjct: 219 AYVIRNS---NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIR 275

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-V 435
               +E  +L ++MQ   + P+  ++ S +  CG  G+LQLG Q+H ++++        +
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLAL 335

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            ++L+DMY KC     A  LF+  Q + V++W +M+  + Q     +A NLF QM  + +
Sbjct: 336 ATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 395

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
              +VT ++ +  C+  G L+ GKWVH  +    V  D  ++TAL DMYAKCGD+  A R
Sbjct: 396 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGR 455

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +F     R++  W+A+I  + MHG   +A  +F +M   G+KPN++TF+ +L ACSH+G 
Sbjct: 456 LFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGL 515

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V EGK  F  M   FG+ P ++HY CMVDLL R+G ++ A +MI SMP   N  +WGAL+
Sbjct: 516 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CR+HK   + +    +L      + GY  L+SNIYA    W +   VR  M+  G+KK
Sbjct: 576 AACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKK 635

Query: 735 VPGYSTI 741
            PG+S I
Sbjct: 636 EPGHSVI 642



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/562 (29%), Positives = 297/562 (52%), Gaps = 23/562 (4%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           NF+ PSVL+AC  +     G+++HG ++K G D+D  +  +++  YGE  C++ AR VFD
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KM  RDVVSWS++I S   N +    L++   M    V P  V M+S+     +  ++R 
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 215 ARSIHGHVLRRKIK--IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
            +++H +V+R      +  P   + + MY+KCG L  A + F  + ++   SWTAMI+  
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            RS   ++  + F++M E    PN IT+++++  C   G L+ GK +H  I+R G     
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             L  AL++ Y +C  +     +  +   R+++ W  ++S YA+     +A  L  QM+T
Sbjct: 334 -ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV----IKIDCKDEFVQSSLIDMYSKCGF 448
            G+ P   ++ S LS C   G+L LG  +H ++    +++DC    + ++L+DMY+KCG 
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC---ILNTALVDMYAKCGD 449

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            N A  LF     + + MWN++I GF  +G   EA+++F +M    ++ +++TF+  + A
Sbjct: 450 INAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHA 509

Query: 509 CSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           CS+ G + +GK +  K++ ++G+   I     + D+  + G L  A  +  SM  + N +
Sbjct: 510 CSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTI 569

Query: 567 SWSAMIDCYGMHG--QLNDAASLFKQMLDSGIKPNEVTF---MNILWACSHSGSVEEGKF 621
            W A++    +H   QL + A+   Q+L+  I+P    +   M+ ++A ++  S   G  
Sbjct: 570 VWGALVAACRLHKNPQLGELAA--TQLLE--IEPENCGYNVLMSNIYAAANRWSDAAG-- 623

Query: 622 YFNAMRIFGVEPDLQHYACMVD 643
               M+  G++ +  H    V+
Sbjct: 624 VRKTMKTVGMKKEPGHSVIEVN 645



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 239/489 (48%), Gaps = 12/489 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L  GL  D      L+  Y E   +  +RLVFD   E D   W+ +I+    N  
Sbjct: 116 IHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKE 175

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F+ ++ L  +M   Q   S     S++   +   ++  G+ +H  +I+   ++   + T+
Sbjct: 176 FDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT 235

Query: 136 --ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
             +L  Y + G L  AR++F+ +T + VVSW+++IA    +  + EG K+F  M  E + 
Sbjct: 236 TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIF 295

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+ +TMLSL   CG   +L+  + +H ++LR    +   L  + + MY KC D+ +A   
Sbjct: 296 PNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARAL 355

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F   + R    WTAM+S Y ++    +A   F +M      P  +T++++L  CA  G L
Sbjct: 356 FDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGAL 415

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
             GK VH  I ++ +  E D  L  AL++ YA+CG ++   ++      R+I  WN +I+
Sbjct: 416 DLGKWVHSYIDKERV--EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIIT 473

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            +A  G  +EAL++  +M+  G+ P+  +    L AC + G +  G ++   ++      
Sbjct: 474 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV 533

Query: 433 EFVQ--SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQNGN--SLEAIN 485
             ++    ++D+  + G  + A+ + + +  K + ++W +++  C  ++N     L A  
Sbjct: 534 PQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQ 593

Query: 486 LFHQMYLNC 494
           L      NC
Sbjct: 594 LLEIEPENC 602



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 194/374 (51%), Gaps = 5/374 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLL--VTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           LF    N+R    +HA+++      H   P +T L++ YA+ G L  +R +F+   +   
Sbjct: 204 LFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTV 263

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I   + +N  EE   L+ +M  E    +     S++  C   G L  G+++H  
Sbjct: 264 VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAY 323

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I++ GF     + T+++  YG+   + +AR +FD   +RDV+ W++++++Y     + + 
Sbjct: 324 ILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQA 383

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
             +F  M   GV P  VT++SL   C    +L   + +H ++ + ++++D  L  + + M
Sbjct: 384 FNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDM 443

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCGD+ +A R F++   R    W A+I+ +   G+ ++AL+ F +M     +PN IT 
Sbjct: 444 YAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITF 503

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           I +L +C+  G + EGK +  +++   G+ P+ ++ G  +++     G + E  ++I ++
Sbjct: 504 IGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYG-CMVDLLGRAGLLDEAHEMIKSM 562

Query: 360 G-ERNILSWNMLIS 372
             + N + W  L++
Sbjct: 563 PIKPNTIVWGALVA 576


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 204/633 (32%), Positives = 345/633 (54%), Gaps = 9/633 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H + +K G   D  + T +   Y  +  L  A K+F++   + V  W++++ SYF   
Sbjct: 22  QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 176 DVSEGLKMFHSMVREGV---EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
              E L +FH M  + V    PD  T+    ++C  L  L   + IHG  L++KI  D  
Sbjct: 82  KWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG-FLKKKIDSDMF 140

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +G++ I +YSKCG +  A + F +  K     WT++I+ Y ++G  + AL  F +M+ ++
Sbjct: 141 VGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 200

Query: 293 E-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           +  P+ +TL++   +CA L     G+SVH  + R+G   +   L  +++  Y + G +  
Sbjct: 201 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL-CLANSILNLYGKTGSIRI 259

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              +   +  ++I+SW+ +++ YA  G    AL L  +M    +  +  +V S+L AC +
Sbjct: 260 AANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS 319

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
             +L+ G QIH   +    + D  V ++L+DMY KC     A  LF R+ +K VV W  +
Sbjct: 320 SSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVL 379

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
             G+ + G + +++ +F  M  N    D +  +  + A S +G +++   +H  +   G 
Sbjct: 380 FSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGF 439

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             + +I  +L ++YAKC  +  A +VF  +   +VV+WS++I  YG HGQ  +A  L  Q
Sbjct: 440 DNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQ 499

Query: 591 MLD-SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
           M + S +KPN+VTF++IL ACSH+G +EEG   F+ M   + + P+++HY  MVDLL R 
Sbjct: 500 MSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRM 559

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G+++ A  MI++MP  A   +WGALL  CRIH+ I + +     L +   N  GYYTLLS
Sbjct: 560 GELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLS 619

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           NIY  + NW +  K+R++++   LKK+ G S +
Sbjct: 620 NIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMV 652



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 181/618 (29%), Positives = 319/618 (51%), Gaps = 18/618 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L  +C +   +T+LH+  L  GL  D    T+L   YA   SL  +  +F+       
Sbjct: 8   VKLLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTV 67

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQAT---ISNFIYPSVLRACSSLGDLGSGEKV 117
           ++W  L++ Y     + E++ L+H+M  +  T     N+     L++CS L  L  G+ +
Sbjct: 68  YLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMI 127

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG  +K   D D  + ++++  Y + G ++DA KVF +    DVV W+SII  Y  N   
Sbjct: 128 HG-FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSP 186

Query: 178 SEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
              L  F  M V E V PD VT++S A AC +L      RS+HG V RR       L NS
Sbjct: 187 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 246

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + +Y K G +  A   F ++  +   SW++M++CY  +G    AL  F +M++ + E N
Sbjct: 247 ILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 306

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKV 355
            +T+I+ L +CA    L EGK +H   +  G   E D  +  AL++ Y +C       ++
Sbjct: 307 RVTVISALRACASSSNLEEGKQIHKLAVNYGF--ELDITVSTALMDMYLKCFSPENAIEL 364

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            + + +++++SW +L S YA  GM+ ++L +   M + G  PD+ ++   L+A   +G +
Sbjct: 365 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIV 424

Query: 416 QLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           Q  L +H  V K     +EF+ +SLI++Y+KC   + A  +F+ ++   VV W+S+I  +
Sbjct: 425 QQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAY 484

Query: 475 YQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRK 532
             +G   EA+ L HQM  +  ++ ++VTF++ + ACS+ G +E+G  + H +++ Y +  
Sbjct: 485 GFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMP 544

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHG--QLNDAASLFK 589
           +I     + D+  + G+L  A  + ++M  +     W A++    +H   ++ + A+L  
Sbjct: 545 NIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNL 604

Query: 590 QMLDSGIKPNEVTFMNIL 607
            +LD    PN   +  +L
Sbjct: 605 FLLD----PNHAGYYTLL 618



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 239/468 (51%), Gaps = 10/468 (2%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           ++ L E C   CS      +H   L+  + +D  +     V+Y++   L  A + F +  
Sbjct: 7   LVKLLETC---CSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETP 63

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKM---LEVKEEPNLITLITVLGSCAGLGWLRE 315
            +    W A++  Y   G + + L  F +M      +E P+  T+   L SC+GL  L  
Sbjct: 64  CKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLEL 123

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +H   ++K +  +  ++G ALIE Y++CG+M++  KV     + +++ W  +I+ Y 
Sbjct: 124 GKMIH-GFLKKKIDSDM-FVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYE 181

Query: 376 RKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
           + G  + AL    +M     + PD  ++ S+ SAC  +    LG  +HG V +     + 
Sbjct: 182 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 241

Query: 435 -VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            + +S++++Y K G   +A  LF  +  K ++ W+SM+  +  NG    A+NLF++M   
Sbjct: 242 CLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDK 301

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +E++ VT ++A++AC++   LE+GK +H   ++YG   DI + TAL DMY KC   + A
Sbjct: 302 RIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENA 361

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
             +F+ M +++VVSW+ +   Y   G  + +  +F  ML +G +P+ +  + IL A S  
Sbjct: 362 IELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSEL 421

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           G V++       +   G + +    A +++L ++   I+ A K+   +
Sbjct: 422 GIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGL 469


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 194/610 (31%), Positives = 333/610 (54%), Gaps = 12/610 (1%)

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           YG+ G + DA  VF  +   + VSW+ I+A++  N    E L  +  MV EG+ PD    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 200 LSLAEACGELCSLRPARSIHGHVLR-RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           +     C     L+  + +H  +L  R ++ D  LG + I MY++C DL  A +TF ++ 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE---PNLITLITVLGSCAGLGWLRE 315
           K+   +W A+I+ Y+R+G  + AL+ +  M+    E   P+ IT  + L +C  +G + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +  + +  G   +   +  ALI  Y++CG +    KV   +  R++++WN +IS YA
Sbjct: 182 GREIEARTVASGYASD-SIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
           ++G + +ALEL  +M      P+  +    L+AC N+  L+ G  IH  V +   + + V
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 436 QSS-LIDMYSKCGFK-NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
             + L++MY+KC      A  +FER++ + V+ WN +I  + Q G + +A+++F QM L 
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +  +E+T    + AC+ +G   +GK VH  + S   + D+ ++ +L +MY +CG L   
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
             VF ++ ++++VSWS +I  Y  HG        F ++L  G+  ++VT ++ L ACSH 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 614 GSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G ++EG + + + +   G+ PD +H+ CMVDLLSR+G +E A  +IH MPF  +   W +
Sbjct: 481 GMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 673 LLNGCRIHKRID-VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           LL+GC++H       +  +K   +   +++   TLLSN+YAE G WD+  K R+      
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RRA 597

Query: 732 LKKVPGYSTI 741
            +K PG S I
Sbjct: 598 ARKNPGCSYI 607



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 163/581 (28%), Positives = 309/581 (53%), Gaps = 11/581 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y + GS+  +  VF   + P+S  W +++  +  N  + E++  Y +M+ E       ++
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI-QTSILCTYGEFGCLDDARKVFDKMT 157
              +  CSS  DL  G+ +H  I++    + D+I  T+++  Y     L+ ARK FD+M 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVR---EGVEPDFVTMLSLAEACGELCSLRP 214
            + +V+W+++IA Y  N D    LK++  MV    EG++PD +T  S   AC  +  +  
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R I    +      D  + N+ I MYSKCG L SA + F +++ R   +W  MIS Y +
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAK 241

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G   +ALE F +M     +PN++T I +L +C  L  L +G+++H ++   G   +   
Sbjct: 242 QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL-V 300

Query: 335 LGPALIEFYAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +G  L+  Y +C   + E  +V   +  R++++WN+LI  Y + G +K+AL++  QMQ  
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
            + P+  ++++ LSAC  +G+ + G  +H  +    CK D  +++SL++MY++CG  +  
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F  I+ KS+V W+++I  + Q+G+S   +  F ++    L  D+VT ++ + ACS+ 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 513 GQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSA 570
           G L++G      ++  +G+  D      + D+ ++ G L+ A+ +   M    + V+W++
Sbjct: 481 GMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 571 MIDCYGMHGQLNDAASLFKQM--LDSGIKPNEVTFMNILWA 609
           ++    +H     AA +  ++  L+S  + + VT ++ ++A
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYA 581



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 236/428 (55%), Gaps = 10/428 (2%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG +  A   F  IE   + SWT +++ + R+G +++AL  + +M+     P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA 358
            +  +G C+    L++G+ +H  I+   +  E+D  LG ALI  YA C  +    K    
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRL-LEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 359 IGERNILSWNMLISEYARKGMSKEALEL---LVQMQTWGLMPDSFSVASSLSACGNVGSL 415
           +G++ +++WN LI+ Y+R G  + AL++   +V     G+ PD+ + +S+L AC  VG +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             G +I    +      D  VQ++LI+MYSKCG    A  +F+R++ + V+ WN+MI G+
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            + G + +A+ LF +M  N  + + VTF+  + AC+N+  LE+G+ +H K+   G   D+
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 535 YIDTALTDMYAKC-GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            I   L +MY KC   L+ A++VF+ M  R+V++W+ +I  Y  +GQ  DA  +FKQM  
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---D 650
             + PNE+T  N+L AC+  G+  +GK     +     + D+     ++++ +R G   D
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 651 IEGAFKMI 658
             G F  I
Sbjct: 420 TVGVFAAI 427



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 258/526 (49%), Gaps = 20/526 (3%)

Query: 6   SCTNLRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           S  +L++   LHA +L T L  +D    T LI  YA    L  +R  FD   +     W 
Sbjct: 70  SSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 65  VLIKCYMWNNFFEESILLYHKMIR---EQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            LI  Y  N     ++ +Y  M+    E        + S L AC+ +GD+  G ++  R 
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEART 189

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +  G+  D ++Q +++  Y + G L+ ARKVFD++ +RDV++W+++I+ Y      ++ L
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  M     +P+ VT + L  AC  L  L   R+IH  V     + D  +GN  + MY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMY 309

Query: 242 SKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           +KC   L  A + F ++  R   +W  +I  Y + G  + AL+ F +M      PN ITL
Sbjct: 310 TKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             VL +CA LG  R+GK+VH  +I  G       L  +L+  Y  CG + +   V  AI 
Sbjct: 370 SNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR 428

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +++++SW+ LI+ YA+ G S+  LE   ++   GL  D  ++ S+LSAC + G L+ G+Q
Sbjct: 429 DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ 488

Query: 421 -----IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGF 474
                +  H +  D +  F+   ++D+ S+ G    A  L   +      V W S++ G 
Sbjct: 489 TFLSMVGDHGLAPDYR-HFL--CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGC 545

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
             + ++  A  +  +++    E++     + +   SN+   E G+W
Sbjct: 546 KLHNDTKRAARVADKLF----ELESEDEHSTVTLLSNV-YAEAGRW 586


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 218/747 (29%), Positives = 375/747 (50%), Gaps = 21/747 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF---KEPDSFM 62
           +CT+LR  T LH+ L   GL +DP A   LI  Y + G    +  VF      +E D   
Sbjct: 242 ACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVS 301

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGSGEKVHGRI 121
           W  +I   +      +++ ++ ++  E    ++    ++L A ++ G D G+  K HGRI
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRI 361

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEG 180
            + G+ +D V+  +I+  Y + G    A  VF ++  + DV+SW++++ +  D     + 
Sbjct: 362 WESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKV 421

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL-RRKIKIDGPLGNSFIV 239
           +  FH M+  G++P+ V+ +++  AC    +L   R IH  +L RR+  ++  +    + 
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVS 481

Query: 240 MYSKCGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           MY KCG +  AE  F  + +  R   +W  M+  Y ++   ++A  + ++ML+    P+ 
Sbjct: 482 MYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGM---GPEYDYLGPALIEFYAECGKMSECEK 354
           ++  +VL SC          S   Q++R  +   G     L  ALI  +  C ++ +   
Sbjct: 542 LSFTSVLSSCYC--------SQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARS 593

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V   +   +++SW  ++S  A     KE   L  +MQ  G++PD F++A++L  C +  +
Sbjct: 594 VFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTT 653

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L LG  IH  V +I  + D  V+++L++MYS CG    A   FE ++ + +V WN M   
Sbjct: 654 LGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + Q G + EA+ LF  M L  ++ D++TF T +        +  GK  H      G+  D
Sbjct: 714 YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSD 773

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + + T L  +YAKCG L  A  +F    +  VV  +A+I     HG   +A  +F +M  
Sbjct: 774 VSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIE 652
            G++P+  T ++I+ AC H+G VEEG   F  M+  FG+ P L+HYAC VDLL R+G +E
Sbjct: 834 EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A ++I  MPF  N  +W +LL  C++    ++ +   + +     +++  + +LSNIY 
Sbjct: 894 HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             G W +    R  +    +K  PG S
Sbjct: 954 ATGKWKDADVDRKKLLDQNVKNAPGMS 980



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 277/532 (52%), Gaps = 27/532 (5%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L++C    DL  G++ H  I   G ++   +   ++  Y   G L++A  +F KM 
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPAR 216
            R+VVSW+++I++   +   +    +F +M+ E    P+  T++++  AC     L   R
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 217 SIHGHV----LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           SIH  +    L R+      +GN+ I MY+KCG    A   F+ I ++   SWTAM   Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 273 NRS-GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            +   ++  AL  F +ML     PN+IT IT LG+C     LR+G  +H  +   G+G  
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEAGLG-- 262

Query: 332 YDYL-GPALIEFYAECGKMSECEKVIHAIGER---NILSWNMLISEYARKGMSKEALELL 387
           +D L G ALI  Y +CG       V  A+  R   +++SWN +IS     G   +A+ + 
Sbjct: 263 FDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVG-SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
            +++  G+ P+S ++ + L+A    G       + HG + +    +D  V +++I MY+K
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAK 382

Query: 446 CGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           CGF + A+ +F RI+ K  V+ WN+M+       +  + +N FH M L  ++ ++V+F+ 
Sbjct: 383 CGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYID----TALTDMYAKCGDLQTAQRVFDSM 560
            + ACSN   L+ G+ +H  +++   R+  Y++    T L  MY KCG +  A+ VF  M
Sbjct: 443 ILNACSNSEALDFGRKIHSLILT---RRRDYVESSVATMLVSMYGKCGSIAEAELVFKEM 499

Query: 561 --SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
               R++V+W+ M+  Y  + +  +A     +ML  G+ P+ ++F ++L +C
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 185/678 (27%), Positives = 311/678 (45%), Gaps = 28/678 (4%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L +SC +   L K  R H  +   GL         LI  Y   GSL  +  +F   +E +
Sbjct: 31  LLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERN 90

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVH 118
              W  LI     +  F  +  L+  M+ E +   N +   ++L AC++  DL  G  +H
Sbjct: 91  VVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIH 150

Query: 119 GRIIKCGFDKDDVIQT----SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             I + G +++    T    +++  Y + G  +DA  VF  +  +DVVSW+++  +Y   
Sbjct: 151 AMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQE 210

Query: 175 ADV-SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                + L++F  M+ + + P+ +T ++   AC    SLR    +H  +    +  D   
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGFDPLA 267

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCT---TSWTAMISCYNRSGWFQKALESFVKMLE 290
           GN+ I MY KCGD   A   F  +  R      SW AMIS    +G    A+  F ++  
Sbjct: 268 GNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRL 327

Query: 291 VKEEPNLITLITVLGSCAGLGW-LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
               PN +TLIT+L + A  G      +  H +I   G   +   +G A+I  YA+CG  
Sbjct: 328 EGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDV-VVGNAIISMYAKCGFF 386

Query: 350 SECEKVIHAIGER-NILSWN-MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
           S    V   I  + +++SWN ML +   RK   K  +     M   G+ P+  S  + L+
Sbjct: 387 SAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGK-VVNTFHHMLLAGIDPNKVSFIAILN 445

Query: 408 ACGNVGSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFER--IQQKS 463
           AC N  +L  G +IH  ++  + D  +  V + L+ MY KCG    A L+F+   +  +S
Sbjct: 446 ACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRS 505

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           +V WN M+  + QN  S EA     +M    +  D ++F + + +C      ++ + +  
Sbjct: 506 LVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRM 562

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
            ++  G R    ++TAL  M+ +C +L+ A+ VFD M   +VVSW+AM+     +    +
Sbjct: 563 CILESGYRSAC-LETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKE 621

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
              LF++M   G+ P++ T    L  C  S ++  GK     +   G+E D+     +++
Sbjct: 622 VHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLN 681

Query: 644 LLSRSGDIEGAFKMIHSM 661
           + S  GD   A     +M
Sbjct: 682 MYSNCGDWREALSFFETM 699



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 241/504 (47%), Gaps = 20/504 (3%)

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           VR     D     +L ++C +   L   +  H  +    ++    LGN  I MY +CG L
Sbjct: 17  VRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSL 76

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGS 306
             A   F K+E+R   SWTA+IS   +SG F +A   F  M LE    PN  TL+ +L +
Sbjct: 77  EEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPE---YDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           CA    L  G+S+H  I   G+  E      +G A+I  YA+CG   +   V   I E++
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD 196

Query: 364 ILSWNMLISEYAR-KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           ++SW  +   YA+ +    +AL +  +M    L P+  +  ++L AC    SL+ G  +H
Sbjct: 197 VVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLH 253

Query: 423 GHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERI---QQKSVVMWNSMICGFYQNG 478
             + +     D    ++LI+MY KCG    AY +F+ +   Q+  +V WN+MI    + G
Sbjct: 254 SLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAG 313

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG-QLEKGKWVHHKLISYGVRKDIYID 537
              +A+ +F ++ L  +  + VT +T + A +  G      +  H ++   G  +D+ + 
Sbjct: 314 RHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVG 373

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            A+  MYAKCG    A  VF  +  + +V+SW+ M+             + F  ML +GI
Sbjct: 374 NAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM---RIFGVEPDLQHYACMVDLLSRSGDIEG 653
            PN+V+F+ IL ACS+S +++ G+   + +   R   VE  +     +V +  + G I  
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA--TMLVSMYGKCGSIAE 491

Query: 654 AFKMIHSMPFPANGSI-WGALLNG 676
           A  +   MP P+   + W  +L  
Sbjct: 492 AELVFKEMPLPSRSLVTWNVMLGA 515



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 134/344 (38%), Gaps = 27/344 (7%)

Query: 16   LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            +HA +   GL  D      L+  Y+  G  R +   F+T K  D   W ++   Y     
Sbjct: 660  IHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGL 719

Query: 76   FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             +E++LL+  M  E        + + L        +  G+  HG   + G D D  + T 
Sbjct: 720  AKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATG 779

Query: 136  ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
            ++  Y + G LD+A  +F       VV  ++II +   +    E +KMF  M +EGV PD
Sbjct: 780  LVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPD 839

Query: 196  FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN--SFIVMYSKCGDLLSAERT 253
              T++S+  ACG    +    S     ++    I   L +   F+ +  + G L  AE+ 
Sbjct: 840  VATLVSIISACGHAGMVEEGCSSF-LTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQI 898

Query: 254  FVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA---- 308
              K+  +  T  WT+++      G  +       ++LE+    +   ++     CA    
Sbjct: 899  IRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKW 958

Query: 309  -------------------GLGWLREGKSVHCQIIRKGMGPEYD 333
                               G+ WL  GK VH  +      P+ D
Sbjct: 959  KDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTD 1002


>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
 gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
          Length = 947

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 220/693 (31%), Positives = 362/693 (52%), Gaps = 20/693 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           + R    +H  ++ TGL  D      L+ SY + G +   +  F+   E +   W+  I 
Sbjct: 244 DARVCEEIHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIA 303

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +  N +F E+I    KM  E    +   + S+L A S   ++  GE +  RII+ G+  
Sbjct: 304 AFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESGYGS 362

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +  +  S++  YG+   L +A++VF  M  R + +SWSS++A+Y  N   +E +K+F  M
Sbjct: 363 NVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHM 422

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV---MYSKC 244
             EG++PD VT++S+ +ACG+L + + +  IH  VL   ++ D  + N+      MY++C
Sbjct: 423 DLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARC 482

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LE--VKEEPNLITLI 301
             L  A + F  + ++    W ++++ Y +SG  ++AL+ F +M LE     +PN +T +
Sbjct: 483 HSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFV 542

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-G 360
           + + +CA    L  G   H +    GM      +  +LI+ Y +C ++ E   V + I G
Sbjct: 543 STIDACANSMDLASGIVFHRRAAEVGMDSNV-VVANSLIKMYGKCKRLEEAMSVFNRILG 601

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R+++SWN LIS +A+ G  + ALE    M   G+ PD  +  S L AC  +GS+  G +
Sbjct: 602 IRDLVSWNALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGRE 661

Query: 421 IH-----GHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           IH     G    +D     V  +L++MY +CG    A L F ++QQ+  + WN++     
Sbjct: 662 IHRQASEGGFESVDA----VLGTLVNMYGRCGNAMEAELAFGKLQQRDAIAWNAVAAAIT 717

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           Q G+   A+ +   M    ++ D VTF+T +  C++   L +GK  H + +  G   DI 
Sbjct: 718 QTGDQRRALGILRGMDNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDII 777

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           +  AL +MY KCG L+ A RVF +M  RN VSW+ +I  Y  +G +  A  LF+ M   G
Sbjct: 778 LGNALLNMYGKCGSLREANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEG 837

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGA 654
           I PN+V+F++I +ACSH+G +EEG  YF  M    G+ P  +HY C VDLL R+G +  A
Sbjct: 838 IVPNQVSFLSIFFACSHAGMLEEGSKYFQYMVADHGLVPTPEHYGCFVDLLGRTGRLADA 897

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            +++  M   A    W  LL    + + ++  K
Sbjct: 898 EELVTGMAEDARSLDWLILLGSSTLQENVEQAK 930



 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 183/648 (28%), Positives = 338/648 (52%), Gaps = 19/648 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H H +  G+  +      LI  Y + G+L  +R + D  ++ + F W +++  Y  N 
Sbjct: 50  RIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNG 109

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQ 133
             ++++  + KM  E    +     S L  C S      G+  H RI + GF  DDV IQ
Sbjct: 110 HLDDALECFWKMELEGVRANRVTIISALGCCKSFS---RGQWFHSRIKQEGFLPDDVMIQ 166

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  YG    +D AR VFD++ ++D+VSW+++I+++  N      +  F SM  +GV+
Sbjct: 167 NALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVK 226

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P  VT +++ EA  E    R    IH  ++   ++ D  L N  +  Y KCGD+   + +
Sbjct: 227 PCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKES 286

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW- 312
           F K++++   SW+  I+ ++++G+F +A+    KM     + N +T +++L +     W 
Sbjct: 287 FEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSILDASV---WE 343

Query: 313 -LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNML 370
            + EG+ +  +II  G G     +  +L+  Y +C  +   ++V  ++ ER N +SW+ L
Sbjct: 344 EIEEGEFLRSRIIESGYGSNV-AVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSL 402

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           ++ YA+   + EA++L   M   GL PD  ++ S L ACG++ + +   QIH  V++   
Sbjct: 403 VAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGL 462

Query: 431 KDEFVQ----SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
           + + V     ++L++MY++C     A  +F  + +K  + WNS++  + Q+G+  EA+ +
Sbjct: 463 ERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQI 522

Query: 487 FHQMYLN-CLEM--DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           F +M L  C  M  ++VTF++ I AC+N   L  G   H +    G+  ++ +  +L  M
Sbjct: 523 FREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKM 582

Query: 544 YAKCGDLQTAQRVFDS-MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           Y KC  L+ A  VF+  +  R++VSW+A+I  +  +G    A   +  M+  G++P+ +T
Sbjct: 583 YGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAMIREGVRPDRIT 642

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           F+++L AC+  GS+ EG+         G E        +V++  R G+
Sbjct: 643 FISVLDACATLGSIAEGREIHRQASEGGFESVDAVLGTLVNMYGRCGN 690



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 301/593 (50%), Gaps = 24/593 (4%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L  C  LG L +G+++H   ++CG  K+  ++  ++  YG+ G L++ARK+ D+M 
Sbjct: 32  YALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDRME 91

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             +V SW+ ++A+Y  N  + + L+ F  M  EGV  + VT++S    C           
Sbjct: 92  DSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTIISALGCCKSFS------- 144

Query: 218 IHGHVLRRKIKIDGPL------GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
             G     +IK +G L       N+ + +Y +C ++  A   F +I  +   SWTAMIS 
Sbjct: 145 -RGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISA 203

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           + ++G   +A+  F  M     +P  +T IT+L +       R  + +H QII  G+  +
Sbjct: 204 FVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKD 263

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
            D L   L+  Y +CG M + ++    + E+N++SW+  I+ +++ G   EA+  L +M 
Sbjct: 264 -DKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMD 322

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKC-GFK 449
             G+  +  +  S L A      ++ G  +   +I+        V +SL++MY KC    
Sbjct: 323 LEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLG 381

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           N   + +   ++K+ + W+S++  + QN  + EA+ LF  M L  L+ D VT ++ + AC
Sbjct: 382 NAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDAC 441

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALT---DMYAKCGDLQTAQRVFDSMSERNVV 566
            ++   ++   +H +++  G+ +D+ +  ALT   +MYA+C  L+ A++VF  M  ++ +
Sbjct: 442 GDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAI 501

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSG---IKPNEVTFMNILWACSHSGSVEEGKFYF 623
            W++++  Y   G   +A  +F++M   G   +KPN+VTF++ + AC++S  +  G  + 
Sbjct: 502 CWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFH 561

Query: 624 NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                 G++ ++     ++ +  +   +E A  + + +    +   W AL++ 
Sbjct: 562 RRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISA 614



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 197/396 (49%), Gaps = 8/396 (2%)

Query: 282 LESFVKMLEV-KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           LE  V+ LE  + + N  T   +L  C  LG L  GK +H   +  GMG    ++   LI
Sbjct: 13  LEQAVEDLEQHQRDANPSTYALMLDWCVRLGALEAGKRIHRHSVECGMGKNR-FVENLLI 71

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             Y +CG + E  K++  + + N+ SW ++++ YA+ G   +ALE   +M+  G+  +  
Sbjct: 72  NMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRV 131

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
           ++ S+L  C    S   G   H  + +      D  +Q++L+ +Y +C   + A  +F+ 
Sbjct: 132 TIISALGCCK---SFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDE 188

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           I  K +V W +MI  F QNG+   A+  F  M  + ++   VTF+T ++A          
Sbjct: 189 ICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVC 248

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           + +H ++I  G+ KD  +   L   Y KCGD++  +  F+ + E+NVVSWS  I  +  +
Sbjct: 249 EEIHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQN 308

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY 638
           G   +A    ++M   G++ NEVTF++IL A S    +EEG+F  + +   G   ++   
Sbjct: 309 GYFWEAIRQLQKMDLEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESGYGSNVAVC 367

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
             +V++  +   +  A ++  SM    N   W +L+
Sbjct: 368 NSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLV 403



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +C +   L      HA  +  G  +D      L+  Y + GSLR +  VF     
Sbjct: 745 ITLLDTCADCNALVEGKIFHARAMELGFGFDIILGNALLNMYGKCGSLREANRVFAAMPV 804

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
            +S  W  LI  Y  N   + +I L+  M  E    +   + S+  ACS  G L  G K
Sbjct: 805 RNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFLSIFFACSHAGMLEEGSK 863


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 187/537 (34%), Positives = 318/537 (59%), Gaps = 4/537 (0%)

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           +L  L+P + IH  ++   +  +  L NS +  Y  CG L  A++ F     +   SWT 
Sbjct: 33  KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTI 92

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +IS   ++  F +A++ F +M+    +PN +T+ +VL + A LG +R  KSVHC  +R G
Sbjct: 93  LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                 ++  AL++ Y++ G M    ++  ++ ERN+++WN ++S Y+  G S+EA++L 
Sbjct: 153 FEGNV-FVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLF 211

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKC 446
             M+  GL+ D +++ S + A  +VG LQ+G  IHG +I+   + D+ ++++L+D+Y   
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSH 271

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTA 505
              + A+ +F  +  K V  W  M+ GF    +   AI  F++M  +  L++D +  +  
Sbjct: 272 NCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGI 331

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + +CS+ G L++G+ VH   I      +I++ +A+ DMYA CG+L+ A+R F  M E++V
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFN 624
           V W+AMI   GM+G   DA  LF QM  SG+ P+E TF+++L+ACSH+G V EG + +++
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
            ++   V P+LQHYAC++D+L R+G ++ A+  I++MPF  +  ++  LL  CRIH  I 
Sbjct: 452 MVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +   I +++     ND GYY LLSN+YA  GNW+     R+ +    +KK PG+S+I
Sbjct: 512 LGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSI 568



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 266/500 (53%), Gaps = 9/500 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           + R   +L+ L ++HA ++ +GL ++   S  L+ +Y   G L  ++ +F      +   
Sbjct: 30  ILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVS 89

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W +LI     N+ F E+I ++ +MI      +     SVL A ++LG +   + VH   +
Sbjct: 90  WTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWV 149

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + GF+ +  ++T+++  Y +FGC+  AR++F+ M+ R+VV+W++I++ Y D+    E + 
Sbjct: 150 RGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAID 209

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F+ M R+G+  DF T++SL  A   +  L+    IHG ++R   + D  +  + + +Y 
Sbjct: 210 LFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYV 269

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLI 301
               +  A R F ++  +   +WT M++ ++    + +A++ F KML ++  + + I L+
Sbjct: 270 SHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALM 329

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            +L SC+  G L++G+ VH   I+        ++G A+I+ YA CG + + ++  + +GE
Sbjct: 330 GILSSCSHSGALQQGRRVHALAIKTCFANNI-FVGSAVIDMYANCGNLEDAKRFFYGMGE 388

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++++ WN +I+     G   +A++L +QM+  GL PD  +  S L AC + G +  GLQI
Sbjct: 389 KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQI 448

Query: 422 HGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNG 478
             H++K       +Q  + +ID+  + G  + AY     +  Q    ++++++     +G
Sbjct: 449 FYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508

Query: 479 NSLEAINLFHQMYLNCLEMD 498
           N    I L H++     EM+
Sbjct: 509 N----IKLGHEISQKIFEME 524



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 208/448 (46%), Gaps = 35/448 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P F +   +R    +H   +  G   +    T L++ Y++ G +  +R +F++  E + 
Sbjct: 129 LPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNV 188

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  Y  + F EE+I L++ M R+   +  +   S++ A  S+G L  G  +HG 
Sbjct: 189 VTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGF 248

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           II+ G++ D  I+T+++  Y    C+DDA +VF +M+ +DV +W+ ++  +         
Sbjct: 249 IIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRA 308

Query: 181 LKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           +K F+ M+  + ++ D + ++ +  +C    +L+  R +H   ++     +  +G++ I 
Sbjct: 309 IKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVID 368

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+ CG+L  A+R F  + ++    W AMI+    +G+   A++ F++M     +P+  T
Sbjct: 369 MYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDEST 428

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++VL +C+  G + EG  +   ++                             K  H I
Sbjct: 429 FVSVLYACSHAGMVYEGLQIFYHMV-----------------------------KTSHVI 459

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              N+  +  +I    R G    A   +  M      PD    ++ L AC   G+++LG 
Sbjct: 460 --PNLQHYACVIDILGRAGQLDAAYSFINNMP---FQPDFDVYSTLLGACRIHGNIKLGH 514

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
           +I   + +++  D      L +MY+  G
Sbjct: 515 EISQKIFEMEPNDAGYYVLLSNMYALAG 542


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 217/669 (32%), Positives = 344/669 (51%), Gaps = 30/669 (4%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS-------ILCTYGEFGCLDDAR 150
           Y  +L+ C  LGDL  G+++H +I + G   DD  ++        ++  YG+ G  D+A+
Sbjct: 17  YARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQ 76

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           + FD +  +++ SW+SI+ +YF     ++ L+ FH M++ GVEPD +  L+    CG L 
Sbjct: 77  RAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILK 136

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            L     IH  +  + +  D  +GN+ + MY KCG L  A++ F  +E +   SWT ++S
Sbjct: 137 RLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVS 196

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK-SVHCQIIRKGMG 329
            +  +G  ++       M     +P+ + L+T+L  C+  G L E     H  I+  G+ 
Sbjct: 197 VFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLD 256

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERN---ILSWNMLISEYARKGMSKEALEL 386
            E   +  AL+  +A CG++ +  ++   + + +   I  WN +I+ YA +G SKEAL L
Sbjct: 257 REA-VVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSK 445
           L  +Q  G+ P+  +  SSL AC    SLQ G  +H  + +     E  V ++L+ MY +
Sbjct: 316 LDSLQLQGVKPNCITFISSLGACS---SLQDGRALHLLIDESGFDREVSVANALVTMYGR 372

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLT 504
           CG    +  LF  + +K +  WNS I     +G S E I L  QM     LE   VT +T
Sbjct: 373 CGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVT 432

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
           A+ AC  +      K VH +    G+  +  +   L DMY K GD+ TA+ +FD    RN
Sbjct: 433 AMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRN 492

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           V +W+AM   Y   G       L + M   G +P+ VTF+++L  C HSG +EE ++ F 
Sbjct: 493 VTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFV 552

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH--SMPFPANGSIWGALLNGCR--- 678
           AMR  FG++P  +HY+C++DLL+R+G+++ A   I   S+  PA+  +W ALL  CR   
Sbjct: 553 AMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLG 612

Query: 679 ------IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
                      + M  +EK    +  + +  +  L+NI A  GNWDE   +R  M   GL
Sbjct: 613 DSSSRARRAARNAMD-VEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGL 671

Query: 733 KKVPGYSTI 741
           +K PG S I
Sbjct: 672 RKEPGRSLI 680



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 153/595 (25%), Positives = 285/595 (47%), Gaps = 34/595 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTR-------LIESYAEMGSLRSSRLVF 52
           L + C  L  L    RLHA +  +GL  D    +        L++ Y + G    ++  F
Sbjct: 20  LLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 79

Query: 53  DTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG 112
           D+    + F W  ++  Y       +++  +H+MI+        ++ + L  C  L  L 
Sbjct: 80  DSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLE 139

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
            G  +H +I     D D  I  +++  YG+ G LD A+++FD +  ++V+SW+ +++ + 
Sbjct: 140 DGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFA 199

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL-RPARSIHGHVLRRKIKIDG 231
           +N    E   +  SM  EG++PD V +L+L   C     L   +   H +++   +  + 
Sbjct: 200 ENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREA 259

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKI---EKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            +  + + M+++CG +  A   F K+     +    W AMI+ Y   G  ++AL     +
Sbjct: 260 VVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSL 319

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                +PN IT I+ LG+C+    L++G+++H  I   G   E   +  AL+  Y  CG 
Sbjct: 320 QLQGVKPNCITFISSLGACSS---LQDGRALHLLIDESGFDREVS-VANALVTMYGRCGS 375

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLS 407
           + +  K+   + E+++ SWN  I+ +A  G S E ++LL QM+   GL P S ++ +++S
Sbjct: 376 LLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMS 435

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           ACG +       ++H    ++  + E  V + L+DMY K G  + A  +F+R  +++V  
Sbjct: 436 ACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTT 495

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WN+M   + Q G +   + L   M  +    D VTF++ +  C + G LE+ ++      
Sbjct: 496 WNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNF---- 551

Query: 527 SYGVRKDIYID------TALTDMYAKCGDLQTAQRVFDSMSERNVVS---WSAMI 572
              +R++  ID      + + D+ A+ G+LQ A+     +S  +  S   W A++
Sbjct: 552 -VAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALL 605



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 256/510 (50%), Gaps = 20/510 (3%)

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-------LGN 235
           M  ++ R GV+    +   L + CG L  L   + +H  +    + +D         LGN
Sbjct: 1   MRAAISRSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGN 60

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MY KCG    A+R F  I  +   SWT+++  Y  +G   +ALE F +M++   EP
Sbjct: 61  CLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEP 120

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +  +  L  C  L  L +G  +H QI  K +  + + +G AL+  Y +CG++   +++
Sbjct: 121 DRLVFLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLE-IGNALVSMYGKCGRLDLAKQL 179

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  +N++SW +L+S +A  G  +E   LL  M   G+ PD   + + L+ C + G L
Sbjct: 180 FDCLEMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVL 239

Query: 416 -QLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM---WNS 469
            +     H +++   +D ++  V ++L+ M+++CG  + A  +FE++   S  +   WN+
Sbjct: 240 DEDSWMAHDYIVGSGLD-REAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNA 298

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           MI  +   G S EA+ L   + L  ++ + +TF++++ ACS+   L+ G+ +H  +   G
Sbjct: 299 MITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLIDESG 355

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
             +++ +  AL  MY +CG L  + ++F  M+E+++ SW++ I  +  HG+ ++   L  
Sbjct: 356 FDREVSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLD 415

Query: 590 QML-DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
           QM  + G++P+ VT +  + AC         K      R  G+E +      +VD+  ++
Sbjct: 416 QMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKA 475

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
           GD++ A + I       N + W A+    R
Sbjct: 476 GDVDTA-RYIFDRALRRNVTTWNAMAGAYR 504


>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 227/643 (35%), Positives = 349/643 (54%), Gaps = 17/643 (2%)

Query: 83  YHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG 141
           YH+M +  A +++  +  S+L+ACSSL  +  G+ +H  ++K GFD       S    Y 
Sbjct: 37  YHQMKKAGAQLTDPTLVHSILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSXXDFYM 95

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           + G LD A  VFD M SRD VSW+ +I  +        GL  F        EP+  T++ 
Sbjct: 96  KTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVL 155

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
              AC  L ++     +HG+++R        + NS + MY+   D+  AE  F ++ +R 
Sbjct: 156 AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERD 214

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
             SW+ MI  Y ++G    AL+ F++M      E + IT+++VL +CA  G +  G+SVH
Sbjct: 215 VISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVH 274

Query: 321 CQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
             +I +G+  +YD ++G ++I+ Y++        K  + +  RN +SWN +IS   R   
Sbjct: 275 GVVICRGL--DYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEK 332

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCK-DEFVQS 437
             EAL L   M   G   D  ++ + L +C   V   Q    IH  VI+   + +EFV +
Sbjct: 333 HSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF-IHSIVIRWGYELNEFVIN 391

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SLID YSKC    LA+ LF+R++ K  V W++MI GF   G   EAI LF +M     + 
Sbjct: 392 SLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKP 451

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           + VT L+ ++A S    L++ KW H   I  G+  ++ + TA+ DMYAKCG++  +++ F
Sbjct: 452 NGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAF 511

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D + E+N+VSW AMI   GM+G   DA +L  +M   G+KPN VT +++L ACSH G VE
Sbjct: 512 DQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVE 571

Query: 618 EG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALL 674
           EG  F+ N ++  GVEP L+HY+CMVD+L R+G +  A  +I  MP        +WGALL
Sbjct: 572 EGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALL 631

Query: 675 NGCRI--HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           + CR   + R+       + L +   +  GY+ L S++YA  G
Sbjct: 632 SACRSSGNSRLGA-GAAXRVLXLEPQSSAGYF-LASSMYAASG 672



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 191/701 (27%), Positives = 328/701 (46%), Gaps = 56/701 (7%)

Query: 3   LFRSCTNL--RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + ++C++L  R    +HA LL  G            + Y + G+L S+  VFD+ +  DS
Sbjct: 56  ILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDS 115

Query: 61  FMWAVLIKCYMWNNFFEESILLYH--KMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
             W ++I  ++     +  +  +   ++I  +  +S  +    + AC SLG +  G K+H
Sbjct: 116 VSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVL--AIHACRSLGAMEEGLKMH 173

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G II+ GF     +Q S+L  Y +   ++ A ++FD+M  RDV+SWS +I  Y    +  
Sbjct: 174 GYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAX 232

Query: 179 EGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
             L++F  M     +E D +TM+S+ +AC     +   RS+HG V+ R +  D  +GNS 
Sbjct: 233 MALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSI 292

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSK  D  SA + F ++  R T SW ++IS   R+    +AL  F  M +     + 
Sbjct: 293 IDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADE 352

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL+ +L SC       + K +H  +IR G     +++  +LI+ Y++C  +    K+  
Sbjct: 353 VTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELN-EFVINSLIDAYSKCDLIELAWKLFD 411

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  ++ +SW+ +I+ +   G   EA+ L  +M      P+  ++ S L A      L+ 
Sbjct: 412 RLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKR 471

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
               HG  I+     E  V ++++DMY+KCG   L+   F++I +K++V W +MI     
Sbjct: 472 SKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGM 531

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIY 535
           NG + +A+ L  +M L+ L+ + VT L+ + ACS+ G +E+G      ++  +GV   + 
Sbjct: 532 NGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLE 591

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
             + + DM  + G L  A  + + M ER       M D  G+ G L              
Sbjct: 592 HYSCMVDMLXRAGKLNXAMNLIEKMPER-------MRDGAGLWGAL-------------- 630

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH-YACMVDLLSRSGDI--- 651
                      L AC  SG+   G     A R+  +EP     Y     + + SG +   
Sbjct: 631 -----------LSACRSSGNSRLGAGA--AXRVLXLEPQSSAGYFLASSMYAASGLVHVE 677

Query: 652 EGAFKMIH-SMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           + A++ +      P  G IWG       + +  D MK  E+
Sbjct: 678 DKAWRFVAGDESHPRAGEIWGV------VEQLHDCMKIAER 712


>gi|242074230|ref|XP_002447051.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
 gi|241938234|gb|EES11379.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
          Length = 818

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 221/701 (31%), Positives = 376/701 (53%), Gaps = 25/701 (3%)

Query: 63  WAVLIKCYMWNNFFEESILLY---HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  L+  Y+  +  E ++ LY   +   R      ++ Y   L AC+    L  G+ VH 
Sbjct: 98  YNALLIAYVARSLPEHALRLYALLNHAARPAPRSDHYTYSCALTACARTRRLRLGKSVHA 157

Query: 120 RIIKCGFDKDD--VIQTSILCTYGEF------GCLDDARKVFDKMTSRDVVSWSSIIASY 171
            +++      D  V++ S+L  Y         G +D  R++FD M  R+ VSW+++   Y
Sbjct: 158 HLLRRARSLPDTAVLRNSLLNLYASCMRYRGDGGVDVVRRLFDVMPKRNAVSWNTLFGWY 217

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS--IHGHVLR--RKI 227
                  E L++F  M+ +G++P  V+ +++  A  +     P+ S  ++G +++  R+ 
Sbjct: 218 VKTGRPQEALELFARMLEDGIKPTPVSFVNVFPAVAKE---DPSWSFVLYGLLVKHGREY 274

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
             D  + +S I M+S+ GDL SA R F    K+ T  W  MI+ Y ++G F +A++  ++
Sbjct: 275 VNDLFVVSSAIAMFSELGDLQSAWRVFEYTAKKNTEVWNTMITGYVQNGKFAEAMDLVIR 334

Query: 288 MLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           ++  KE P +++T ++ L + +     R G+ +H  +I+         LG AL+  Y+ C
Sbjct: 335 LMGSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIKGTHATLPVILGNALVVMYSRC 394

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G +    K+   + E++I+SWN +++ + +     E L L+ QMQ      DS ++ + L
Sbjct: 395 GNVQTAFKLFDRLPEKDIVSWNTMVTAFVQNDFDLEGLLLVYQMQKSCFAADSVTLTAVL 454

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ--QKSV 464
           SA  N G LQ+G Q HG++++   +DE ++S LIDMY+K G   +A  +F+     ++  
Sbjct: 455 SAASNTGDLQIGKQAHGYLVRRGIEDEGLESYLIDMYAKSGRIEIAQRVFDDYGNVKRDE 514

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ-LEKGKWVHH 523
           V WN+MI G+ Q+G   +AI  F  M    LE   VT  + + AC  +G  L  GK +H 
Sbjct: 515 VTWNAMIAGYTQSGQPEQAILTFRAMLQASLEPTSVTLASVLPACDPLGGGLCAGKQIHC 574

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             +   +  ++++ TAL DMY+KCG++ TA+ VF  M E++ VS++ MI   G HG    
Sbjct: 575 FALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFAVMIEKSTVSYTTMISGLGQHGFGER 634

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
           A SLF  M + G+KP+ VTF+  + AC++SG V+EG   + +M  FGV    QH  C+VD
Sbjct: 635 ALSLFYYMQEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVAVTPQHRCCIVD 694

Query: 644 LLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRIDVMK-TIEKELSVTGT-ND 700
           +L+++G +E A++ +  +    N  SIWG+LL  C+   + +++    E+ L +      
Sbjct: 695 MLAKAGRVEEAYEFVQELGEEGNFISIWGSLLVSCKAQDKQELVNLATERLLCIEKKYGH 754

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            GY  LLS+I+A EGNW     +R  M + GL+K+ G S I
Sbjct: 755 AGYNVLLSHIFAAEGNWSSADSLRKEMRLRGLRKMAGSSWI 795



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 245/470 (52%), Gaps = 14/470 (2%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESI-LLYHKMIREQATIS 94
           I  ++E+G L+S+  VF+   + ++ +W  +I  Y+ N  F E++ L+   M  ++  + 
Sbjct: 285 IAMFSELGDLQSAWRVFEYTAKKNTEVWNTMITGYVQNGKFAEAMDLVIRLMGSKEVPLD 344

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI-QTSILCTYGEFGCLDDARKVF 153
              + S L A S   D   G+++HG +IK       VI   +++  Y   G +  A K+F
Sbjct: 345 VVTFLSALTAASQSQDGRLGQQLHGYLIKGTHATLPVILGNALVVMYSRCGNVQTAFKLF 404

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D++  +D+VSW++++ ++  N    EGL + + M +     D VT+ ++  A      L+
Sbjct: 405 DRLPEKDIVSWNTMVTAFVQNDFDLEGLLLVYQMQKSCFAADSVTLTAVLSAASNTGDLQ 464

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE--KRCTTSWTAMISC 271
             +  HG+++RR I+ +G L +  I MY+K G +  A+R F      KR   +W AMI+ 
Sbjct: 465 IGKQAHGYLVRRGIEDEG-LESYLIDMYAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIAG 523

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL-GWLREGKSVHCQIIRKGMGP 330
           Y +SG  ++A+ +F  ML+   EP  +TL +VL +C  L G L  GK +HC  +R+ +  
Sbjct: 524 YTQSGQPEQAILTFRAMLQASLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDT 583

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
              ++G AL++ Y++CG++S  E V   + E++ +S+  +IS   + G  + AL L   M
Sbjct: 584 NV-FVGTALVDMYSKCGEISTAEHVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYM 642

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG--HVIKIDCKDEFVQSSLIDMYSKCGF 448
           Q  GL PD  +  +++SAC   G +  GL ++       +    +  +  ++DM +K G 
Sbjct: 643 QEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVAVTPQH-RCCIVDMLAKAGR 701

Query: 449 KNLAYLLFERIQQKS--VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
              AY   + + ++   + +W S++    +  +  E +NL  +  L C+E
Sbjct: 702 VEEAYEFVQELGEEGNFISIWGSLLVSC-KAQDKQELVNLATERLL-CIE 749



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 197/369 (53%), Gaps = 20/369 (5%)

Query: 15  RLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +LH +L + G H   P      L+  Y+  G+++++  +FD   E D   W  ++  ++ 
Sbjct: 366 QLHGYL-IKGTHATLPVILGNALVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFVQ 424

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N+F  E +LL ++M +      +    +VL A S+ GDL  G++ HG +++ G + D+ +
Sbjct: 425 NDFDLEGLLLVYQMQKSCFAADSVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIE-DEGL 483

Query: 133 QTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           ++ ++  Y + G ++ A++VFD      RD V+W+++IA Y  +    + +  F +M++ 
Sbjct: 484 ESYLIDMYAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQA 543

Query: 191 GVEPDFVTMLSLAEAC----GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
            +EP  VT+ S+  AC    G LC+    + IH   LRR +  +  +G + + MYSKCG+
Sbjct: 544 SLEPTSVTLASVLPACDPLGGGLCA---GKQIHCFALRRCLDTNVFVGTALVDMYSKCGE 600

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + +AE  F  + ++ T S+T MIS   + G+ ++AL  F  M E   +P+ +T +  + +
Sbjct: 601 ISTAEHVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYMQEKGLKPDGVTFLAAISA 660

Query: 307 CAGLGWLREGKSVHCQIIRKGMG--PEYDYLGPALIEFYAECGKMSECEKVIHAIGER-N 363
           C   G + EG +++  +   G+   P++      +++  A+ G++ E  + +  +GE  N
Sbjct: 661 CNYSGLVDEGLALYRSMETFGVAVTPQHRC---CIVDMLAKAGRVEEAYEFVQELGEEGN 717

Query: 364 ILS-WNMLI 371
            +S W  L+
Sbjct: 718 FISIWGSLL 726


>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 205/693 (29%), Positives = 361/693 (52%), Gaps = 30/693 (4%)

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRA--------------CSSLGDLGS 113
           K Y+    F   +LL+ +++R +   ++  +  +++A              CS   +   
Sbjct: 23  KFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSE-NEKAE 81

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
             ++    IK GFD+   + T+ L  Y + G +  A+++FD    +DVVSW+++I+ Y  
Sbjct: 82  ANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTR 141

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             +  +  K+F  M R   +P   T++SL  +CG        +SIHG  ++  + +D  +
Sbjct: 142 CGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQV 201

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N+ + MY KC DL   +  F +I ++   SW  MI  + ++G F +A+  F +MLE   
Sbjct: 202 KNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESV 261

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N +T++++L + A  G       +HC   + G+      +  +L+  Y +CG +   E
Sbjct: 262 NANSVTMVSILSANANTG------CIHCYATKIGLVENVSVV-TSLVCSYVKCGYIELAE 314

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +  +  ++N+++   +IS YA KG     + L   +Q   +  D+ ++   +       
Sbjct: 315 LIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPD 374

Query: 414 SLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
            + +GL  HG+ +K    IDC    V +  I MYSK    +  + LF+ + +K++  WNS
Sbjct: 375 HIGIGLAFHGYGVKSGLIIDC---LVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNS 431

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I    Q G S++A+ LF QM L+    D +T  + + AC   G L  G+ +H  ++   
Sbjct: 432 VISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNN 491

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +  + ++ TAL DMY KCG +  A+ VF SM E  + SW+++I  YG+ G  N A   + 
Sbjct: 492 LDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYT 551

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
           +M++ GIKPN++TF  IL AC+H G VEEG+ YF  M + FG+ P+ QH A MV +L R+
Sbjct: 552 EMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRA 611

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G  E A   I +M    + ++WGALL+ C IH+ + + +++ K+L  +  ++ G++ L+S
Sbjct: 612 GLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNCSNGGFFVLMS 671

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           N+YA    W++  ++R +M   G     G S +
Sbjct: 672 NLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 286/598 (47%), Gaps = 14/598 (2%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P F S     +  +L  H +  G       ST  ++ Y+++G +++++ +FD F E D  
Sbjct: 71  PSFCSENEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVV 130

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  LI  Y       ++  L+ +M R +         S++ +C +      G+ +HG  
Sbjct: 131 SWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLG 190

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K G D D  ++ +++  YG+   LD  + +F ++T + VVSW+++I ++  N   SE +
Sbjct: 191 VKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAM 250

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +F  M+ E V  + VTM+S+  A            IH +  +  +  +  +  S +  Y
Sbjct: 251 LVFKQMLEESVNANSVTMVSILSANAN------TGCIHCYATKIGLVENVSVVTSLVCSY 304

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA--LESFVKMLEVKEEPNLIT 299
            KCG +  AE  ++   K+   + TA+IS Y   G       L S V+ L++K +   + 
Sbjct: 305 VKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDA--VA 362

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++ ++        +  G + H   ++ G+  +   +    I  Y++   +     +   +
Sbjct: 363 MVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDC-LVANGFISMYSKFDNIDAVFSLFQEM 421

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++ + SWN +IS  A+ G S +A+ L  QM   G  PDS ++AS LSAC   G+L  G 
Sbjct: 422 HKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGE 481

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H ++++ +   E FV ++L+DMY KCG  + A  +F+ +++  +  WNS+I G+   G
Sbjct: 482 ILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFG 541

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
               A+  + +M    ++ +++TF   + AC++ G +E+G K+       +G+  +    
Sbjct: 542 FHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHC 601

Query: 538 TALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
            ++  M  + G  + A     +M +  +   W A++    +H ++    S+ K++  S
Sbjct: 602 ASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFS 659


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 212/675 (31%), Positives = 362/675 (53%), Gaps = 73/675 (10%)

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + T ++ +Y   G  D A  V +++T    V W+ +I  +     +   + +   M+R G
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
              D  T+  + +ACGEL S R   + HG +     + +  + N+ + MYS+CG L  A 
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 252 RTFVKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEP-----NLITLIT 302
             F +I +R      SW +++S + +S     AL+ F KM L V E+P     ++I+++ 
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +C  L  + + K VH   IR G   +  ++G ALI+ YA+CG M    KV + +  +
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDV-FVGNALIDAYAKCGLMENAVKVFNMMEFK 291

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQ---------TW-------------------- 393
           +++SWN +++ Y++ G  K A EL   M+         TW                    
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351

Query: 394 ------GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC------------KDEFV 435
                 G +P+  ++ S LSAC ++G+   G++IH + +K +C            +D  V
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLK-NCLLTLDNDFGGEDEDLMV 410

Query: 436 QSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            ++LIDMYSKC     A  +F+ I  ++++VV W  MI G  Q G+S +A+ LF +M   
Sbjct: 411 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 470

Query: 494 C--LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA------LTDMYA 545
              +  +  T    + AC+++  +  GK +H    +Y +R   Y  +A      L +MY+
Sbjct: 471 PYGVAPNAYTISCILMACAHLAAIRIGKQIH----AYVLRHHQYDSSAYFVANCLINMYS 526

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCGD+ TA+ VFDSMS+++ +SW++M+  YGMHG+ ++A  +F +M  +G  P+++TF+ 
Sbjct: 527 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 586

Query: 606 ILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L+ACSH G V++G  YF++M   +G+ P  +HYA  +DLL+R G ++ A+K +  MP  
Sbjct: 587 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 646

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
               +W ALL+ CR+H  +++ +    +L      ++G YTL+SNIYA  G W +  ++R
Sbjct: 647 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 706

Query: 725 SIMEVTGLKKVPGYS 739
            +M+ +G+KK PG S
Sbjct: 707 HLMKKSGIKKRPGCS 721



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 169/623 (27%), Positives = 311/623 (49%), Gaps = 62/623 (9%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           T ++ SY   G+   + LV +      +  W +LI+ ++     + +I +  +M+R    
Sbjct: 55  TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           + +F  P VL+AC  L     G   HG I   GF+ +  I  +++  Y   G L++A  +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174

Query: 153 FDKMTSR---DVVSWSSIIASYFDNADVSEGLKMFHSM---VRE---GVEPDFVTMLSLA 203
           FD++T R   DV+SW+SI++++  +++    L +F  M   V E       D ++++++ 
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            ACG L ++   + +HG+ +R    +D  +GN+ I  Y+KCG + +A + F  +E +   
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 294

Query: 264 SWTAMISCYNRSGWFQKALESFVKM----------------------------LEVKEE- 294
           SW AM++ Y++SG F+ A E F  M                            L V  + 
Sbjct: 295 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 354

Query: 295 ------PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM--------GPEYDYLG-PAL 339
                 PN +T+I+VL +CA LG   +G  +H   ++  +        G + D +   AL
Sbjct: 355 IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNAL 414

Query: 340 IEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQM--QTWGL 395
           I+ Y++C        +   I   ERN+++W ++I  +A+ G S +AL+L V+M  + +G+
Sbjct: 415 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 474

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLA 452
            P++++++  L AC ++ ++++G QIH +V++    D    FV + LI+MYSKCG  + A
Sbjct: 475 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTA 534

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ + QKS + W SM+ G+  +G   EA+++F +M       D++TFL  + ACS+ 
Sbjct: 535 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 594

Query: 513 GQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSA 570
           G +++G  +       YG+           D+ A+ G L  A +    M  E   V W A
Sbjct: 595 GMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVA 654

Query: 571 MIDCYGMHGQLNDAASLFKQMLD 593
           ++    +H  +  A     ++++
Sbjct: 655 LLSACRVHSNVELAEHALNKLVE 677



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 219/485 (45%), Gaps = 72/485 (14%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-- 57
           + ++C  L   R  +  H  +   G   +      L+  Y+  GSL  + ++FD   +  
Sbjct: 123 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 182

Query: 58  -PDSFMWAVLIKCYM-----WNN---FFEESILLYHKMIREQATISNFIYPSVLRACSSL 108
             D   W  ++  ++     W     F + +++++ K   E++ I + +  ++L AC SL
Sbjct: 183 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV--NILPACGSL 240

Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
             +   ++VHG  I+ G   D  +  +++  Y + G +++A KVF+ M  +DVVSW++++
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 300

Query: 169 ASYFDNADVS-----------------------------------EGLKMFHSMVREGVE 193
           A Y  + +                                     E L +F  M+  G  
Sbjct: 301 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 360

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLG---------NSFIVMYSK 243
           P+ VT++S+  AC  L +      IH + L+   + +D   G         N+ I MYSK
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420

Query: 244 CGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLIT 299
           C    +A   F  + +E+R   +WT MI  + + G    AL+ FV+M+       PN  T
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD----YLGPALIEFYAECGKMSECEKV 355
           +  +L +CA L  +R GK +H  ++R     +YD    ++   LI  Y++CG +     V
Sbjct: 481 ISCILMACAHLAAIRIGKQIHAYVLRHH---QYDSSAYFVANCLINMYSKCGDVDTARHV 537

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
             ++ +++ +SW  +++ Y   G   EAL++  +M+  G +PD  +    L AC + G +
Sbjct: 538 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 597

Query: 416 QLGLQ 420
             GL 
Sbjct: 598 DQGLS 602



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 28/384 (7%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEP----DSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           ++  Y++ G+ +++  +F   ++     D   W  +I  Y       E++ ++ +MI   
Sbjct: 299 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 358

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-C---------GFDKDDVIQTSILCTY 140
           +  +     SVL AC+SLG    G ++H   +K C         G D+D ++  +++  Y
Sbjct: 359 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 418

Query: 141 GEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE--GVEPDF 196
            +      AR +FD   +  R+VV+W+ +I  +    D ++ LK+F  M+ E  GV P+ 
Sbjct: 419 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 478

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERT 253
            T+  +  AC  L ++R  + IH +VLR   + D     + N  I MYSKCGD+ +A   
Sbjct: 479 YTISCILMACAHLAAIRIGKQIHAYVLRHH-QYDSSAYFVANCLINMYSKCGDVDTARHV 537

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  + ++   SWT+M++ Y   G   +AL+ F KM +    P+ IT + VL +C+  G +
Sbjct: 538 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 597

Query: 314 REGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLI 371
            +G S    +    G+ P  ++   A I+  A  G++ +  K +  +  E   + W  L+
Sbjct: 598 DQGLSYFDSMSADYGLTPRAEHYAYA-IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALL 656

Query: 372 SE---YARKGMSKEALELLVQMQT 392
           S    ++   +++ AL  LV+M  
Sbjct: 657 SACRVHSNVELAEHALNKLVEMNA 680


>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
 gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
          Length = 740

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 218/713 (30%), Positives = 372/713 (52%), Gaps = 50/713 (7%)

Query: 41  EMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPS 100
           ++G L  +  VFD   E D   W  +I   +   F E+++++Y +M+ +    S F   S
Sbjct: 50  KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 109

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDARKVFDKMTSR 159
           VL ACS + D   G + HG  +K G DK+  +  ++L  Y + G  +D   +VF+ ++  
Sbjct: 110 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 169

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV---TMLSLA---EACGELCSL- 212
           + VS++++I        V E ++MF  M  +GV+ D V    +LS++   E C  L  + 
Sbjct: 170 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 229

Query: 213 --RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
                + IH   LR     D  L NS + +Y+K  D+  AE  F ++ +    SW  MI 
Sbjct: 230 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 289

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            + +     K++E   +M +   +PN +T I+VLG+C   G +  G+             
Sbjct: 290 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR------------- 336

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
                                  ++  +I + ++ +WN ++S Y+     +EA+    QM
Sbjct: 337 -----------------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 373

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
           Q   L PD  +++  LS+C  +  L+ G QIHG VI+ +  K+  + S LI +YS+C   
Sbjct: 374 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 433

Query: 450 NLAYLLFER-IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQ 507
            ++  +F+  I +  +  WNSMI GF  N    +A+ LF +M+    L  +E +F T + 
Sbjct: 434 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 493

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           +CS +  L  G+  H  ++  G   D +++TALTDMY KCG++ +A++ FD++  +N V 
Sbjct: 494 SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI 553

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+ MI  YG +G+ ++A  L+++M+ SG KP+ +TF+++L ACSHSG VE G    ++M 
Sbjct: 554 WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQ 613

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           RI G+EP+L HY C+VD L R+G +E A K+  + P+ ++  +W  LL+ CR+H  + + 
Sbjct: 614 RIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLA 673

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + + ++L       +  Y LLSN Y+    WD+   ++ +M    + K PG S
Sbjct: 674 RRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 726



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 154/621 (24%), Positives = 279/621 (44%), Gaps = 79/621 (12%)

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G   D  +   +L  Y E G  D ARKVFD+M+ RDV SW++ +       D+ E  ++F
Sbjct: 2   GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61

Query: 185 HSM---------------VREGVE----------------PDFVTMLSLAEACGELCSLR 213
             M               VR+G E                P   T+ S+  AC ++    
Sbjct: 62  DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 121

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS-AERTFVKIEKRCTTSWTAMISCY 272
                HG  ++  +  +  +GN+ + MY+KCG ++    R F  + +    S+TA+I   
Sbjct: 122 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 181

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA---GLGWLRE------GKSVHCQI 323
            R     +A++ F  M E   + + + L  +L   A   G   L E      GK +HC  
Sbjct: 182 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 241

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           +R G G +  +L  +L+E YA+   M+  E +   + E N++SWN++I  + ++  S ++
Sbjct: 242 LRLGFGGDL-HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKS 300

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
           +E L +M+  G  P+  +  S L AC   G ++ G +I                      
Sbjct: 301 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI---------------------- 338

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
                       F  I Q SV  WN+M+ G+    +  EAI+ F QM    L+ D+ T  
Sbjct: 339 ------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 386

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS-MSE 562
             + +C+ +  LE GK +H  +I   + K+ +I + L  +Y++C  ++ ++ +FD  ++E
Sbjct: 387 VILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINE 446

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWACSHSGSVEEGKF 621
            ++  W++MI  +  +     A  LF++M  + +  PNE +F  +L +CS   S+  G+ 
Sbjct: 447 LDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQ 506

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           +   +   G   D      + D+  + G+I+ A +   ++    N  IW  +++G   + 
Sbjct: 507 FHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHGYGHNG 565

Query: 682 RIDVMKTIEKELSVTGTNDNG 702
           R D    + +++  +G   +G
Sbjct: 566 RGDEAVGLYRKMISSGEKPDG 586



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 179/376 (47%), Gaps = 15/376 (3%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           +RS  ++  LTR+      +G   +      ++ +    G + + R +F +  +P    W
Sbjct: 295 YRSDKSVEFLTRMRD----SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAW 350

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             ++  Y     +EE+I  + +M  +           +L +C+ L  L  G+++HG +I+
Sbjct: 351 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 410

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDK-MTSRDVVSWSSIIASYFDNADVSEGLK 182
               K+  I + ++  Y E   ++ +  +FD  +   D+  W+S+I+ +  N   ++ L 
Sbjct: 411 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 470

Query: 183 MFHSMVREGV----EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           +F  M +  V    E  F T+LS   +C  LCSL   R  HG V++     D  +  +  
Sbjct: 471 LFRRMHQTAVLCPNETSFATVLS---SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 527

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG++ SA + F  + ++ T  W  MI  Y  +G   +A+  + KM+   E+P+ I
Sbjct: 528 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 587

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           T ++VL +C+  G +  G  +   + R  G+ PE D+    +++     G++ + EK+  
Sbjct: 588 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHY-ICIVDCLGRAGRLEDAEKLAE 646

Query: 358 AIGER-NILSWNMLIS 372
           A   + + + W +L+S
Sbjct: 647 ATPYKSSSVLWEILLS 662



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 5/209 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT-FKEP 58
           +  SC  LR L    ++H  ++ T +  +    + LI  Y+E   +  S  +FD    E 
Sbjct: 388 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 447

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKV 117
           D   W  +I  +  N    ++++L+ +M +      N   + +VL +CS L  L  G + 
Sbjct: 448 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 507

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K G+  D  ++T++   Y + G +D AR+ FD +  ++ V W+ +I  Y  N   
Sbjct: 508 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 567

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            E + ++  M+  G +PD +T +S+  AC
Sbjct: 568 DEAVGLYRKMISSGEKPDGITFVSVLTAC 596



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 18/288 (6%)

Query: 427 KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
           ++  +D +  ++ +    K G    A  +F+ + ++ VV WN+MI    + G   +A+ +
Sbjct: 32  EMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVV 91

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           + +M  +       T  + + ACS +     G   H   +  G+ K+I++  AL  MYAK
Sbjct: 92  YKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAK 151

Query: 547 CGDL-QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           CG +     RVF+S+S+ N VS++A+I       ++ +A  +F+ M + G++ + V   N
Sbjct: 152 CGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSN 211

Query: 606 IL-WACSHSGSVEEGKFYFN---------AMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           IL  +    G     + Y N         A+R+ G   DL     ++++ +++ D+ GA 
Sbjct: 212 ILSISAPREGCDSLSEIYGNELGKQIHCLALRL-GFGGDLHLNNSLLEIYAKNKDMNGAE 270

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY 703
            +   MP   N   W  ++ G     R D  K++E    +T   D+G+
Sbjct: 271 LIFAEMP-EVNVVSWNIMIVGFGQEYRSD--KSVE---FLTRMRDSGF 312


>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
          Length = 807

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 222/757 (29%), Positives = 382/757 (50%), Gaps = 60/757 (7%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L    ++HA +L  G  Y  +    T+L+  YA+  +L  ++++F   + 
Sbjct: 52  ILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV 111

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA +I         E +++ + +M+       NF+ P+V +AC +L     G  V
Sbjct: 112 RNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGV 171

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG + K G      + +S+   YG+ G LDDARKVFD +  R+ V+W++++  Y  N   
Sbjct: 172 HGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMY 231

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++   M +EG+EP  VT+ +   A   +  +   +  H   +   +++D  LG S 
Sbjct: 232 EEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSI 291

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y K G +  AE  F  + ++   +W  +IS Y + G  ++A    + M ++    NL
Sbjct: 292 LNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEA----IYMCQLMRRENL 347

Query: 298 ----ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +TL T++ +      L+ GK + C  IR G+  +   L    ++ YA+CG +   +
Sbjct: 348 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDI-VLASTAVDMYAKCGSIVNAK 406

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS---VASSLSACG 410
           KV  +  +++++ WN L+S YA  G+S EAL L  +MQ   + P+  +   +  SL   G
Sbjct: 407 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 466

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
            V                + K+ F+Q     M S   F NL             + W +M
Sbjct: 467 QVN---------------EAKEMFLQ-----MQSSGIFPNL-------------ISWTTM 493

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           + G  QNG S EAI    +M  + L  +  T   A+ AC N+  L  G+ +H     Y +
Sbjct: 494 MNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIH----GYII 549

Query: 531 RKDIY-----IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
           R   Y     I+T+L DMYAKCGD+  A+RVF S     +  ++AMI  Y ++G++ +A 
Sbjct: 550 RNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAI 609

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDL 644
           +L++ + D G+KP+ +T  ++L AC++   V +    F  M    G++P L+HY  MVDL
Sbjct: 610 TLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDL 669

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
           L+ +G+ + A +++  MP+  +  +  +L   C    + ++++ + K L  +  +++G Y
Sbjct: 670 LASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNY 729

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++SN YA EG+WDE  K+R +M+V GLKK PG S I
Sbjct: 730 VMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWI 766



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 11/207 (5%)

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG--VRKD 533
           +NG   EA++L  +M    + +    +   +Q C     L  G+ +H +++  G    ++
Sbjct: 23  KNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARN 82

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            YI+T L   YAKC  L+ AQ +F  +  RNV SW+A+I      G    A   F +ML+
Sbjct: 83  EYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 142

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH----YACMVDLLSRSG 649
           +GI P+     N+  AC   G+++  +F    +  +  +  L H     + + D+  + G
Sbjct: 143 NGIFPDNFVVPNVCKAC---GALQWSRF-GRGVHGYVAKAGLHHCVFVASSLADMYGKCG 198

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNG 676
            ++ A K+   +P   N   W AL+ G
Sbjct: 199 VLDDARKVFDYIP-DRNAVAWNALMVG 224


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 227/788 (28%), Positives = 389/788 (49%), Gaps = 101/788 (12%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTR-LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           T+L  +  +HA ++     ++P A+ + LI SY   G   S+ +VF          +  L
Sbjct: 44  TSLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVF----------YVGL 93

Query: 67  IKCYM-WNNFFEE----------SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            + Y+ WN+F EE           + ++ ++  +     + +Y   L+ C+ + D+  G 
Sbjct: 94  PRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGM 153

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++HG +IK GFD D  ++ +++  YG    L+ A +VF +M + + + W+  I     + 
Sbjct: 154 EIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSE 213

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
            + +G+++F  M    ++ +  T++ + +ACG++ +L  A+ IHG+V R  +  D  L N
Sbjct: 214 KLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCN 273

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             I MYSK G L  A R F  +E R T+SW +MIS Y   G+   A   F ++     +P
Sbjct: 274 PLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 333

Query: 296 NLIT-----------------------------------LITVLGSCAGLGWLREGKSVH 320
           +++T                                   + +VL + + LG+L  GK  H
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETH 393

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
             ++R G   +  Y+G +LI+ Y +   ++  + V   +  RNI +WN L+S Y+ KGM 
Sbjct: 394 GYVLRNGFDCDV-YVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 452

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLI 440
           ++AL LL QM+  G+ PD  +    +S     G                           
Sbjct: 453 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG--------------------------- 485

Query: 441 DMYSKCGFKNLAYLLFERIQQKS------VVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
                CG + LA L     Q KS      VV W ++I G  Q GN+ +++  F QM    
Sbjct: 486 -----CGKEALAVLH----QTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEG 536

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  +  +    ++AC+++  L+KGK +H   I  G  +D+++ TAL DMY+K   L+ A 
Sbjct: 537 VMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 596

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           +VF  +  + + SW+ MI  + + G   +A S+F +M   G+ P+ +TF  +L AC +SG
Sbjct: 597 KVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 656

Query: 615 SVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            + EG  YF++M   + + P L+HY CMVDLL R+G ++ A+ +IH+MP   + +IWGAL
Sbjct: 657 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 716

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L  CRIHK +   +T  K L     N++  Y L+ N+Y+    W++   +R +M   G++
Sbjct: 717 LGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 776

Query: 734 KVPGYSTI 741
               +S I
Sbjct: 777 NRQVWSWI 784



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 11/176 (6%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L R+C +L  L +   +H   +  G   D   +T LI+ Y++  SL+++  VF   +   
Sbjct: 547 LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT 606

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +      +E+I ++++M +         + ++L AC + G +G G K   
Sbjct: 607 LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFD 666

Query: 120 RIIKCGFDKDDVIQTSILC----TYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
            +I    D   V +    C      G  G LD+A  +   M  + D   W +++ S
Sbjct: 667 SMIT---DYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 719


>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 205/693 (29%), Positives = 360/693 (51%), Gaps = 30/693 (4%)

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRA--------------CSSLGDLGS 113
           K Y+    F   +LL+ +++R +   ++  +  +++A              CS   +   
Sbjct: 23  KFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSE-NEKAE 81

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
             ++    IK GFD+   + T+ L  Y + G +  A+++FD    +DVVSW+++I+ Y  
Sbjct: 82  ANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTR 141

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             +  +  K+F  M R   +P   T++SL  +CG        +SIHG  ++  + +D  +
Sbjct: 142 CGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQV 201

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N+ + MY KC DL   +  F +I ++   SW  MI  + ++G F +A+  F +MLE   
Sbjct: 202 KNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESV 261

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N +T++++L + A  G       +HC   + G+      +  +L+  Y +CG +   E
Sbjct: 262 NANSVTMVSILSANANTG------CIHCYATKIGLVENVSVV-TSLVCSYVKCGYIELAE 314

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +  +  ++N+++   +IS YA KG     + L   +Q   +  D+ ++   +       
Sbjct: 315 LIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPD 374

Query: 414 SLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
            + +GL  HG+ +K    IDC    V +  I MYSK    +  + LF+ + +K++  WNS
Sbjct: 375 HIGIGLAFHGYGVKSGLIIDC---LVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNS 431

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I    Q G S++A+ LF QM L+    D +T  + + AC   G L  G+ +H  ++   
Sbjct: 432 VISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNN 491

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +  + ++ TAL DMY KCG +  A+ VF SM E  + SW+++I  YG+ G  N A   + 
Sbjct: 492 LDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYT 551

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
           +M++ GIKPN++TF  IL AC+H G VEEG+ YF  M + FG+ P+ QH A MV +L R+
Sbjct: 552 EMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRA 611

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G  E A   I +M    + ++WGALL+ C IH+ + + +++ K+L  +   + G++ L+S
Sbjct: 612 GLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNCRNGGFFVLMS 671

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           N+YA    W++  ++R +M   G     G S +
Sbjct: 672 NLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 149/616 (24%), Positives = 293/616 (47%), Gaps = 15/616 (2%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P F S     +  +L  H +  G       ST  ++ Y+++G +++++ +FD F E D  
Sbjct: 71  PSFCSENEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVV 130

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  LI  Y       ++  L+ +M R +         S++ +C +      G+ +HG  
Sbjct: 131 SWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLG 190

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K G D D  ++ +++  YG+   LD  + +F ++T + VVSW+++I ++  N   SE +
Sbjct: 191 VKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAM 250

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +F  M+ E V  + VTM+S+  A            IH +  +  +  +  +  S +  Y
Sbjct: 251 LVFKQMLEESVNANSVTMVSILSANAN------TGCIHCYATKIGLVENVSVVTSLVCSY 304

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA--LESFVKMLEVKEEPNLIT 299
            KCG +  AE  ++   K+   + TA+IS Y   G       L S V+ L++K +   + 
Sbjct: 305 VKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDA--VA 362

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++ ++        +  G + H   ++ G+  +   +    I  Y++   +     +   +
Sbjct: 363 MVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDC-LVANGFISMYSKFDNIDAVFSLFQEM 421

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ++ + SWN +IS  A+ G S +A+ L  QM   G  PDS ++AS LSAC   G+L  G 
Sbjct: 422 HKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGE 481

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H ++++ +   E FV ++L+DMY KCG  + A  +F+ +++  +  WNS+I G+   G
Sbjct: 482 ILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFG 541

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
               A+  + +M    ++ +++TF   + AC++ G +E+G K+       +G+  +    
Sbjct: 542 FHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHC 601

Query: 538 TALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            ++  M  + G  + A     +M +  +   W A++    +H ++    S+ K++  S  
Sbjct: 602 ASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNC 661

Query: 597 KPNE-VTFMNILWACS 611
           +       M+ L+A S
Sbjct: 662 RNGGFFVLMSNLYAAS 677


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 227/738 (30%), Positives = 357/738 (48%), Gaps = 101/738 (13%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV-------- 152
            LR+C S G L     +HGR++  G      +Q ++L  Y   G L DAR++        
Sbjct: 10  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69

Query: 153 ------------------------FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
                                   FD+M  RDV SW+++++ YF      +GL+ F SM 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 189 REGVE-PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           R G   P+  T   + ++CG L     A  + G   +     D  +  + + M+ +CG +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 248 LSAERTFVKIEK-------------------------------RCTTSWTAMISCYNRSG 276
             A R F +IE+                               R   SW  MI+  ++SG
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YL 335
             ++AL   V+M       +  T  + L +CA L  L  GK +H ++IR    P+ D Y+
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL--PQIDPYV 307

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALIE YA+CG   E ++V +++ +RN +SW +LI    +     +++EL  QM+   +
Sbjct: 308 ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS-SLIDMYSKCGFKNLAYL 454
             D F++A+ +S C N   L LG Q+H   +K       V S SLI +Y+KCG    A  
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH-------------------------- 488
           +F  + ++ +V W SMI  + Q GN ++A   F                           
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 487

Query: 489 -QMYLNCLEM-----DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            +MY   L       D VT++T  + C++IG  + G  +    +  G+  ++ +  A   
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG +  AQ++FD ++ ++VVSW+AMI  Y  HG    AA  F  ML  G KP+ ++
Sbjct: 548 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 607

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           ++ +L  CSHSG V+EGK YF+ M R+ G+ P L+H++CMVDLL R+G +  A  +I  M
Sbjct: 608 YVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKM 667

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P      +WGALL+ C+IH   ++ +   K +    + D+G Y LL+ IY++ G  D+  
Sbjct: 668 PMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSA 727

Query: 722 KVRSIMEVTGLKKVPGYS 739
           +VR +M   G+KK PGYS
Sbjct: 728 QVRKLMRDKGIKKNPGYS 745



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 171/669 (25%), Positives = 296/669 (44%), Gaps = 73/669 (10%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++  YA+ GSL  +  +FD     D   W  L+  Y     F + +  +  M R   ++ 
Sbjct: 77  MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136

Query: 95  N-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL-----CTYGEFGC--- 145
           N F +  V+++C +LG      ++ G   K  F  D  ++T+++     C Y +F     
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196

Query: 146 -----------------------LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
                                  +D A + F+ M  RDVVSW+ +IA+   +  V E L 
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +   M R+GV  D  T  S   AC  L SL   + +H  V+R   +ID  + ++ I +Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG    A+R F  ++ R + SWT +I    +   F K++E F +M       +   L T
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALAT 376

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           ++  C     L  G+ +H   ++ G       +  +LI  YA+CG +   E V  ++ ER
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAI-VVSNSLISLYAKCGDLQNAEFVFSSMSER 435

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQ-----TWGLM--------------------- 396
           +I+SW  +I+ Y++ G   +A E    M      TW  M                     
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAML 495

Query: 397 ------PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
                 PD  +  +    C ++G+ +LG QI GH +K     +  V ++ I MYSKCG  
Sbjct: 496 SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRI 555

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A  LF+ +  K VV WN+MI G+ Q+G   +A   F  M     + D ++++  +  C
Sbjct: 556 SEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGC 615

Query: 510 SNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS- 567
           S+ G +++GK     +   +G+   +   + + D+  + G L  A+ + D M  +     
Sbjct: 616 SHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEV 675

Query: 568 WSAMIDCYGMHG--QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           W A++    +HG  +L + A+     LDS   P+  ++M +    S +G  ++       
Sbjct: 676 WGALLSACKIHGNDELAELAAKHVFELDS---PDSGSYMLLAKIYSDAGKSDDSAQVRKL 732

Query: 626 MRIFGVEPD 634
           MR  G++ +
Sbjct: 733 MRDKGIKKN 741



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 223/478 (46%), Gaps = 71/478 (14%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C  L  L    +LHA ++ +    DP  ++ LIE YA+ GS + ++ VF++ ++ +S  
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W VLI   +    F +S+ L+++M  E   I  F   +++  C +  DL  G ++H   +
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY----------- 171
           K G ++  V+  S++  Y + G L +A  VF  M+ RD+VSW+S+I +Y           
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458

Query: 172 -FDNADV-------------------SEGLKMFHSMV-REGVEPDFVTMLSLAEACGELC 210
            FD                        +GLKM+ +M+ ++ V PD+VT ++L   C ++ 
Sbjct: 459 FFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           + +    I GH ++  + ++  + N+ I MYSKCG +  A++ F  +  +   SW AMI+
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR-KGMG 329
            Y++ G  ++A ++F  ML    +P+ I+ + VL  C+  G ++EGK     + R  G+ 
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           P  ++    +++     G ++E + +I                         + + +   
Sbjct: 639 PGLEHF-SCMVDLLGRAGHLTEAKDLI-------------------------DKMPMKPT 672

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            + WG +         LSAC   G+ +L      HV ++D  D      L  +YS  G
Sbjct: 673 AEVWGAL---------LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAG 721



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 149/349 (42%), Gaps = 72/349 (20%)

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCG------- 447
           M  + ++A +L +CG+ G+L     +HG ++ +      F+Q++L+  Y  CG       
Sbjct: 1   MAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARR 60

Query: 448 ------------FKNL-------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
                         N+             A  LF+R+ ++ V  WN+++ G++Q    L+
Sbjct: 61  LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLD 120

Query: 483 AINLFHQMYLNCLEM-DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            +  F  M+ +   + +  TF   +++C  +G  E    +      +    D  ++TAL 
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 180

Query: 542 DMYAKCGDLQTAQRV-------------------------------FDSMSERNVVSWSA 570
           DM+ +CG +  A R+                               F+ M+ER+VVSW+ 
Sbjct: 181 DMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIF 629
           MI      G++ +A  L  +M   G++ +  T+ + L AC+   S+  GK  +   +R  
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300

Query: 630 GVEPDLQHY--ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              P +  Y  + +++L ++ G  + A ++ +S+    N   W  L+ G
Sbjct: 301 ---PQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGG 345


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 227/738 (30%), Positives = 357/738 (48%), Gaps = 101/738 (13%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV-------- 152
            LR+C S G L     +HGR++  G      +Q ++L  Y   G L DAR++        
Sbjct: 10  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69

Query: 153 ------------------------FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
                                   FD+M  RDV SW+++++ YF      +GL+ F SM 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 189 REGVE-PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           R G   P+  T   + ++CG L     A  + G   +     D  +  + + M+ +CG +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 248 LSAERTFVKIEK-------------------------------RCTTSWTAMISCYNRSG 276
             A R F +IE+                               R   SW  MI+  ++SG
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YL 335
             ++AL   V+M       +  T  + L +CA L  L  GK +H ++IR    P+ D Y+
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL--PQIDPYV 307

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALIE YA+CG   E ++V +++ +RN +SW +LI    +     +++EL  QM+   +
Sbjct: 308 ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS-SLIDMYSKCGFKNLAYL 454
             D F++A+ +S C N   L LG Q+H   +K       V S SLI +Y+KCG    A  
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH-------------------------- 488
           +F  + ++ +V W SMI  + Q GN ++A   F                           
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDG 487

Query: 489 -QMYLNCLEM-----DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            +MY   L       D VT++T  + C++IG  + G  +    +  G+  ++ +  A   
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG +  AQ++FD ++ ++VVSW+AMI  Y  HG    AA  F  ML  G KP+ ++
Sbjct: 548 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 607

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           ++ +L  CSHSG V+EGK YF+ M R+ G+ P L+H++CMVDLL R+G +  A  +I  M
Sbjct: 608 YVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKM 667

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P      +WGALL+ C+IH   ++ +   K +    + D+G Y LL+ IY++ G  D+  
Sbjct: 668 PMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSA 727

Query: 722 KVRSIMEVTGLKKVPGYS 739
           +VR +M   G+KK PGYS
Sbjct: 728 QVRKLMRDKGIKKNPGYS 745



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 171/669 (25%), Positives = 296/669 (44%), Gaps = 73/669 (10%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++  YA+ GSL  +  +FD     D   W  L+  Y     F + +  +  M R   ++ 
Sbjct: 77  MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136

Query: 95  N-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL-----CTYGEFGC--- 145
           N F +  V+++C +LG      ++ G   K  F  D  ++T+++     C Y +F     
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196

Query: 146 -----------------------LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
                                  +D A + F+ M  RDVVSW+ +IA+   +  V E L 
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +   M R+GV  D  T  S   AC  L SL   + +H  V+R   +ID  + ++ I +Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG    A+R F  ++ R + SWT +I    +   F K++E F +M       +   L T
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALAT 376

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           ++  C     L  G+ +H   ++ G       +  +LI  YA+CG +   E V  ++ ER
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAI-VVSNSLISLYAKCGDLQNAEFVFSSMSER 435

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQ-----TWGLM--------------------- 396
           +I+SW  +I+ Y++ G   +A E    M      TW  M                     
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAML 495

Query: 397 ------PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
                 PD  +  +    C ++G+ +LG QI GH +K     +  V ++ I MYSKCG  
Sbjct: 496 SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRI 555

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A  LF+ +  K VV WN+MI G+ Q+G   +A   F  M     + D ++++  +  C
Sbjct: 556 SEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGC 615

Query: 510 SNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS- 567
           S+ G +++GK     +   +G+   +   + + D+  + G L  A+ + D M  +     
Sbjct: 616 SHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEV 675

Query: 568 WSAMIDCYGMHG--QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           W A++    +HG  +L + A+     LDS   P+  ++M +    S +G  ++       
Sbjct: 676 WGALLSACKIHGNDELAELAAKHVFELDS---PDSGSYMLLAKIYSDAGKSDDSAQVRKL 732

Query: 626 MRIFGVEPD 634
           MR  G++ +
Sbjct: 733 MRDKGIKKN 741



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 224/478 (46%), Gaps = 71/478 (14%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C  L  L    +LHA ++ +    DP  ++ LIE YA+ GS + ++ VF++ ++ +S  
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W VLI   +    F +S+ L+++M  E   I  F   +++  C +  DL  G ++H   +
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY----------- 171
           K G ++  V+  S++  Y + G L +A  VF  M+ RD+VSW+S+I +Y           
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458

Query: 172 -FDNADV-------------------SEGLKMFHSMV-REGVEPDFVTMLSLAEACGELC 210
            FD  D                     +GLKM+ +M+ ++ V PD+VT ++L   C ++ 
Sbjct: 459 FFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           + +    I GH ++  + ++  + N+ I MYSKCG +  A++ F  +  +   SW AMI+
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR-KGMG 329
            Y++ G  ++A ++F  ML    +P+ I+ + VL  C+  G ++EGK     + R  G+ 
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           P  ++    +++     G ++E + +I                         + + +   
Sbjct: 639 PGLEHF-SCMVDLLGRAGHLTEAKDLI-------------------------DKMPMKPT 672

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            + WG +         LSAC   G+ +L      HV ++D  D      L  +YS  G
Sbjct: 673 AEVWGAL---------LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAG 721



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 147/344 (42%), Gaps = 72/344 (20%)

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCG------------ 447
           ++A +L +CG+ G+L     +HG ++ +      F+Q++L+  Y  CG            
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 448 -------FKNL-------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
                    N+             A  LF+R+ ++ V  WN+++ G++Q    L+ +  F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 488 HQMYLNCLEM-DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
             M+ +   + +  TF   +++C  +G  E    +      +    D  ++TAL DM+ +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 547 CGDLQTAQRV-------------------------------FDSMSERNVVSWSAMIDCY 575
           CG +  A R+                               F+ M+ER+VVSW+ MI   
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPD 634
              G++ +A  L  +M   G++ +  T+ + L AC+   S+  GK  +   +R     P 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQ 302

Query: 635 LQHY--ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +  Y  + +++L ++ G  + A ++ +S+    N   W  L+ G
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGG 345


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 193/610 (31%), Positives = 334/610 (54%), Gaps = 12/610 (1%)

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           YG+ G + DA  VF  +   + VSW+ I+A++  N    E L  +  MV EG+ PD    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           +     C     L+  + +H  +L  ++ + D  LG + I MY++C DL  A +TF ++ 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE---PNLITLITVLGSCAGLGWLRE 315
           K+   +W A+I+ Y+R+G  + AL+ +  M+    E   P+ IT  + L +C+ +G + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +  + +  G   +   +  ALI  Y++CG +    KV   +  R++++WN +IS YA
Sbjct: 182 GREIEARTVASGYASD-SIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
           ++G + +ALEL  +M      P+  +    L+AC N+  L+ G  IH  V +   + + V
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 436 QSS-LIDMYSKCGFK-NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
             + L++MY+KC      A  +FER++ + V+ WN +I  + Q G + +A+++F QM L 
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +  +E+T    + AC+ +G   +GK VH  + S   + D+ ++ +L +MY +CG L   
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
             VF ++ ++++VSWS +I  Y  HG        F ++L  G+  ++VT ++ L ACSH 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 614 GSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G ++EG + + + +   G+ PD +H+ CMVDLLSR+G +E A  +IH MPF  +   W +
Sbjct: 481 GMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 673 LLNGCRIHKRID-VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           LL+GC++H       +  +K   +   +++   TLLSN+YAE G WD+  K R+      
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RRA 597

Query: 732 LKKVPGYSTI 741
            +K PG S I
Sbjct: 598 ARKNPGCSYI 607



 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 166/582 (28%), Positives = 311/582 (53%), Gaps = 13/582 (2%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y + GS+  +  VF   + P+S  W +++  +  N  + E++  Y +M+ E       ++
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI-QTSILCTYGEFGCLDDARKVFDKMT 157
              +  CSS  DL  G+ +H  I++    + D+I  T+++  Y     L+ ARK FD+M 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVR---EGVEPDFVTMLSLAEACGELCSLRP 214
            + +V+W+++IA Y  N D    LK++  MV    EG++PD +T  S   AC  +  +  
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R I    +      D  + N+ I MYSKCG L SA + F +++ R   +W  MIS Y +
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAK 241

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD- 333
            G   +ALE F +M     +PN++T I +L +C  L  L +G+++H ++  K  G E D 
Sbjct: 242 QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKV--KEHGYESDL 299

Query: 334 YLGPALIEFYAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            +G  L+  Y +C   + E  +V   +  R++++WN+LI  Y + G +K+AL++  QMQ 
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL 451
             + P+  ++++ LSAC  +G+ + G  +H  +    CK D  +++SL++MY++CG  + 
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
              +F  I+ KS+V W+++I  + Q+G+S   +  F ++    L  D+VT ++ + ACS+
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 512 IGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWS 569
            G L++G      ++  +G+  D      + D+ ++ G L+ A+ +   M    + V+W+
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 570 AMIDCYGMHGQLNDAASLFKQM--LDSGIKPNEVTFMNILWA 609
           +++    +H     AA +  ++  L+S  + + VT ++ ++A
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYA 581



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 237/428 (55%), Gaps = 10/428 (2%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG +  A   F  IE   + SWT +++ + R+G +++AL  + +M+     P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA 358
            +  +G C+    L++G+ +H  I+   +  E+D  LG ALI  YA C  +    K    
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQL-LEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 359 IGERNILSWNMLISEYARKGMSKEALEL---LVQMQTWGLMPDSFSVASSLSACGNVGSL 415
           +G++ +++WN LI+ Y+R G  + AL++   +V     G+ PD+ + +S+L AC  VG +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             G +I    +      D  VQ++LI+MYSKCG    A  +F+R++ + V+ WN+MI G+
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            + G + +A+ LF +M  N  + + VTF+  + AC+N+  LE+G+ +H K+  +G   D+
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 535 YIDTALTDMYAKC-GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            I   L +MY KC   L+ A++VF+ +  R+V++W+ +I  Y  +GQ  DA  +FKQM  
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---D 650
             + PNE+T  N+L AC+  G+  +GK     +     + D+     ++++ +R G   D
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 651 IEGAFKMI 658
             G F  I
Sbjct: 420 TVGVFAAI 427



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 258/526 (49%), Gaps = 20/526 (3%)

Query: 6   SCTNLRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           S  +L++   LHA +L T L  +D    T LI  YA    L  +R  FD   +     W 
Sbjct: 70  SSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 65  VLIKCYMWNNFFEESILLYHKMIR---EQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            LI  Y  N     ++ +Y  M+    E        + S L ACS +GD+  G ++  R 
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEART 189

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +  G+  D ++Q +++  Y + G L+ ARKVFD++ +RDV++W+++I+ Y      ++ L
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  M     +P+ VT + L  AC  L  L   R+IH  V     + D  +GN  + MY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMY 309

Query: 242 SKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           +KC   L  A + F ++  R   +W  +I  Y + G  + AL+ F +M      PN ITL
Sbjct: 310 TKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             VL +CA LG  R+GK+VH  +I  G       L  +L+  Y  CG + +   V  AI 
Sbjct: 370 SNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR 428

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +++++SW+ LI+ YA+ G S+  LE   ++   GL  D  ++ S+LSAC + G L+ G+Q
Sbjct: 429 DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ 488

Query: 421 -----IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGF 474
                +  H +  D +  F+   ++D+ S+ G    A  L   +      V W S++ G 
Sbjct: 489 SFLSMVGDHGLAPDYR-HFL--CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGC 545

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
             + ++  A  +  +++    E++     + +   SN+   E G+W
Sbjct: 546 KLHNDTKRAARVADKLF----ELESEDEHSTVTLLSNV-YAEAGRW 586


>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19220, mitochondrial; Flags: Precursor
          Length = 951

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 227/742 (30%), Positives = 377/742 (50%), Gaps = 15/742 (2%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           RK + LH   + TGL  D      L+  YA+  +L S+  VF   +  D   W  ++   
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
           + N    +S+  +  M           +  V+ ACSS+ +L  GE +HG +IK G+  + 
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324

Query: 131 VIQ--TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
            +    SI+  Y + G  + A  VF+++  RDV+S ++I+  +  N    E   + + M 
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384

Query: 189 R-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVMYSKCGD 246
             + ++PD  T++S+   CG+L   R  R++HG+ +R +++     + NS I MY KCG 
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVL 304
              AE  F     R   SW +MIS ++++G+  KA   F +++      + +L T++ +L
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RN 363
            SC     L  GKSVHC + + G G        ++I  Y  C  ++     +  + E R+
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLGFGDNM-LSANSVINMYIGCRDLTSAFLRLETMSETRD 563

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + SWN +IS  A  G   E+L     M   G +  D  ++  ++SA GN+G +  G   H
Sbjct: 564 LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 623

Query: 423 GHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G  IK +   D  +Q++LI MY +C     A  +F  I   ++  WN +I    QN    
Sbjct: 624 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 683

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           E   LF  + L   E +E+TF+  + A + +G    G   H  LI  G + + ++  AL 
Sbjct: 684 EVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 740

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNE 600
           DMY+ CG L+T  +VF +    ++ +W+++I  +G HG    A  LFK++  +S ++PN+
Sbjct: 741 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 800

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
            +F+++L ACSHSG ++EG  Y+  M   FGV+P  +H   +VD+L R+G +  A++ I 
Sbjct: 801 SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 860

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            +  P    +WGALL+ C  H    + K + + L     ++  YY  L+N Y   G W+E
Sbjct: 861 GIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEE 920

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             ++R ++E   LKK+PGYS I
Sbjct: 921 AVRLRKMVEDNALKKLPGYSVI 942



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 192/704 (27%), Positives = 335/704 (47%), Gaps = 15/704 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   L  GL  D   S++L+  Y   G L SS  +FD  KE D  +W  +I     N  
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           +  ++ L+ +MI +     +        A SSL        +H   I+ G   D  +  +
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +   L  A  VF  M  RD+VSW++I+     N    + L+ F SM   G E D
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG--PLGNSFIVMYSKCGDLLSAERT 253
            VT   +  AC  +  L    S+HG V++     +    +GNS I MYSKCGD  +AE  
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEPNLITLITVLGSCAGLGW 312
           F ++  R   S  A+++ +  +G F++A     +M  V K +P++ T++++   C  L +
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
            REG++VH   +R  M      +  ++I+ Y +CG  ++ E +      R+++SWN +IS
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468

Query: 373 EYARKGMSKEALELLVQMQT-WGLMPDSFS-VASSLSACGNVGSLQLGLQIHGHVIKIDC 430
            +++ G + +A  L  ++ + +     S S V + L++C +  SL  G  +H  + K+  
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGF 528

Query: 431 KDEFVQS-SLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFH 488
            D  + + S+I+MY  C     A+L  E + + + +  WNS+I G   +G+ LE++  F 
Sbjct: 529 GDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQ 588

Query: 489 QMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            M     +  D +T L  I A  N+G + +G+  H   I      D  +   L  MY +C
Sbjct: 589 AMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRC 648

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            D+++A +VF  +S+ N+ SW+ +I     +    +   LF+ +    ++PNE+TF+ +L
Sbjct: 649 KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLL 705

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            A +  GS   G      +   G + +    A +VD+ S  G +E   K+  +    +  
Sbjct: 706 SASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSI- 764

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTG---TNDNGYYTLLS 708
           S W ++++    H   +    + KELS       N + + +LLS
Sbjct: 765 SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 808



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 300/588 (51%), Gaps = 12/588 (2%)

Query: 88  REQATI-SNFIY-PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           RE  T+ S+F++   VLR+     +  +   VH   +KCG  +D    + +L  YG  G 
Sbjct: 78  RENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGE 137

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L  +  +FD++  +DV+ W+S+I +   N      + +F  M+ +G E D  T+L  A A
Sbjct: 138 LVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASA 197

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
              L   R    +H   +   +  D  L N+ + +Y+K  +L SAE  F  +E R   SW
Sbjct: 198 LSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
             +++    +G  +K+L+ F  M    +E + +T   V+ +C+ +  L  G+S+H  +I+
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317

Query: 326 KGMGPE-YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
            G  PE +  +G ++I  Y++CG     E V   +  R+++S N +++ +A  GM +EA 
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377

Query: 385 ELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLID 441
            +L QMQ+   + PD  +V S  S CG++   + G  +HG+ ++++ +   ++  +S+ID
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVID 437

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMDE 499
           MY KCG    A LLF+    + +V WNSMI  F QNG + +A NLF ++    +C +   
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSL 497

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            T L  + +C +   L  GK VH  L   G   ++    ++ +MY  C DL +A    ++
Sbjct: 498 STVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLET 557

Query: 560 MSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVE 617
           MSE R++ SW+++I      G   ++   F+ M   G I+ + +T +  + A  + G V 
Sbjct: 558 MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 617

Query: 618 EGKFYFNAMRIFGV-EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +G+  F+ + I  + E D Q    ++ +  R  DIE A K+   +  P
Sbjct: 618 QGR-CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 664


>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
 gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
          Length = 840

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 219/749 (29%), Positives = 388/749 (51%), Gaps = 45/749 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTG--LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           L + C   R L+   ++H  +L  G  +  +    T+L+  Y++      +  +F   + 
Sbjct: 84  LLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQV 143

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA ++       F +E+++ + +M      + NF+ P   +A  +L  +G G+ V
Sbjct: 144 QNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSV 203

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  ++K G      + TS+L  YG+ G  ++A+KVFDK+  +++V+W+S+I ++  N   
Sbjct: 204 HAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLN 263

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           +E ++ F+ M  EGV P  VT+ S   A   L  +   +  H   +   +++   LG+S 
Sbjct: 264 AEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSL 323

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I  YSK G +  AE  F ++ ++ T +W  ++S Y  +G   +AL+    +  V +  NL
Sbjct: 324 INFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALD----LCHVMQSENL 379

Query: 298 ----ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +TL +++ + A    L+ GK  H   +R  +  +   +  ++I+ YA+C K+    
Sbjct: 380 RFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVA-VASSIIDMYAKCEKLECAR 438

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V  A  +R+++ WN L++ YA +G S E L+L  QMQ  GL P+  S  S +       
Sbjct: 439 RVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVI------- 491

Query: 414 SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
              LGL   G V +   KD F++   + +   C                +++ W ++ICG
Sbjct: 492 ---LGLLNKGKVDQ--AKDTFMEMQSLGI---C---------------PNLITWTTLICG 528

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             QNG   EA   F  M    ++ + ++  + + ACS +  L  G+ +H  +  + +   
Sbjct: 529 LAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVS 588

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             +  +L +MYAKCG +  A+RVFD + ++ +  ++AMI  Y +HGQ  +A SLF+++ +
Sbjct: 589 TPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKE 648

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
             IKP+E+TF +IL AC H+G V EG + + + +    +    +HY C+V +LSRS +++
Sbjct: 649 ECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLD 708

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A ++I  MPF  +  I+G+LL  CR H   ++ + + + L     +++G Y  LSN YA
Sbjct: 709 EALRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYA 768

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G WDE  KVR +M+   L K+PG+S I
Sbjct: 769 ATGMWDEASKVRGLMKERSLSKIPGHSLI 797



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 262/519 (50%), Gaps = 15/519 (2%)

Query: 153 FDKMTSRDVVSWSSI---IASYFDNADVSEGLKMFHSMVREGVE--PDFVTMLSLAEACG 207
           F ++ S   +S+ S    I+S      + E L +   +  E +   PD      L + C 
Sbjct: 32  FSQIASNVQISYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYG--ELLQGCV 89

Query: 208 ELCSLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
              +L   + IHG +L+    I  +  +    ++ YSKC +   A R F K++ +   SW
Sbjct: 90  YERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSW 149

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            A++   +R G+ Q+AL  F +M E     +   +     +   L W+  GKSVH  +++
Sbjct: 150 AAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVK 209

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G+G    Y+  +L++ Y +CG   E +KV   I E+NI++WN +I  + + G++ EA+E
Sbjct: 210 MGLGGCI-YVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVE 268

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ---SSLIDM 442
              +M+  G+ P   +++S LSA  N+  +  G Q  GH + +    E      SSLI+ 
Sbjct: 269 TFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQ--GHALAVLSGLELTNILGSSLINF 326

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           YSK G    A L+F  + +K  V WN ++ G+  NG    A++L H M    L  D VT 
Sbjct: 327 YSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTL 386

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            + + A ++   L+ GK  H   +   +  D+ + +++ DMYAKC  L+ A+RVFD+ ++
Sbjct: 387 ASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAK 446

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           R+++ W+ ++  Y   G   +   LF QM   G+ PN +++ +++    + G V++ K  
Sbjct: 447 RDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDT 506

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F  M+  G+ P+L  +  ++  L+++G  + AF    SM
Sbjct: 507 FMEMQSLGICPNLITWTTLICGLAQNGLGDEAFLTFQSM 545


>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
          Length = 784

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 219/753 (29%), Positives = 380/753 (50%), Gaps = 52/753 (6%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L    ++HA +L  G  Y  +    T+L+  YA+  +L  ++++F   + 
Sbjct: 53  ILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV 112

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA +I         E +++ + +M+       NF+ P+V +AC +L     G  V
Sbjct: 113 RNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGV 172

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG + K G      + +S+   YG+ G LDDARKVFD +  R+ V+W++++  Y  N   
Sbjct: 173 HGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMN 232

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++   M +EG+EP  VT+ +   A   +  +   +  H   +   + +D  LG S 
Sbjct: 233 EEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSI 292

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y   G +  AE  F  + ++   +W  +IS Y + G  ++A+     M     + + 
Sbjct: 293 LNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDC 352

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL T++ +      L+ GK + C  IR G+  +   L    ++ YA+CG +   +KV  
Sbjct: 353 VTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDI-VLASTAVDMYAKCGSIVNAKKVFD 411

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS---VASSLSACGNVGS 414
           +  +++++ WN L+S YA  G+S EAL L  +MQ   + P+  +   +  SL   G V  
Sbjct: 412 STVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVN- 470

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
                         + K+ F+Q     M S   F NL             + W +M+ G 
Sbjct: 471 --------------EAKEMFLQ-----MQSSGIFPNL-------------ISWTTMMNGL 498

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            QNG S EAI    +M  + L  +  T   A+ AC+N+  L  G+ +H     Y +R   
Sbjct: 499 VQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIH----GYIIRNQQ 554

Query: 535 Y-----IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           Y     I+T+L DMYAKCGD+  A+RVF S     +  ++AMI  Y ++G++ +A +L++
Sbjct: 555 YSFSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYR 614

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
            + D G+KP+ +T  ++L AC++   V +    F+ M    G++P L+HY  MVDLL+ +
Sbjct: 615 SLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASA 674

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G+ + A +++  MP+  +  +  +L   C    + ++++ + K L  +  +++G Y ++S
Sbjct: 675 GETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMIS 734

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           N YA EG+WDE  K+R +M+V GLKK PG S I
Sbjct: 735 NAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWI 767



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 11/207 (5%)

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG--VRKD 533
           +NG   EA++L  +M    + +    +   +Q C     L  G+ +H +++  G    ++
Sbjct: 24  KNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARN 83

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            YI+T L   YAKC  L+ AQ +F  +  RNV SW+A+I      G    A   F +ML+
Sbjct: 84  EYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 143

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH----YACMVDLLSRSG 649
           +GI P+     N+  AC   G+++  +F    +  +  +  L H     + + D+  + G
Sbjct: 144 NGIFPDNFVVPNVCKAC---GALQWSRF-GRGVHGYVAKAGLHHCVFVASSLADMYGKCG 199

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNG 676
            ++ A K+   +P   N   W AL+ G
Sbjct: 200 VLDDARKVFDYIP-DRNAVAWNALMVG 225


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 212/617 (34%), Positives = 339/617 (54%), Gaps = 14/617 (2%)

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  ++L     FG    A +VF KM  RDV SW+ ++  Y     + E L ++H M+  G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V PD  T   +  +CG +   R  R +H HVLR     +  + N+ + MY+KCGD+++A 
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F  +      SW AMI+ +  +G     LE F+ ML+ + +PNL+T+ +V  +   L 
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +   K +H   +++G   +  +   +LI+ YA  G M +   V   +  R+ +SW  +I
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCN-SLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMI 369

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH------GHV 425
           S Y + G   +ALE+   M+   + PD  ++AS+L+AC  +GSL +G+++H      G +
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFM 429

Query: 426 IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
             +      V ++L++MY+K    + A  +F+ + +K VV W+SMI GF  N  + EA+ 
Sbjct: 430 SYV-----VVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALY 484

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
            F  M  + ++ + VTF+ A+ AC+  G L  GK +H  ++  G+  + Y+  AL D+Y 
Sbjct: 485 YFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYV 543

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG    A   F +   ++VVSW+ MI  +  HG    A S F QM+  G  P+EVTF+ 
Sbjct: 544 KCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVA 603

Query: 606 ILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L ACS  G V EG   F++M   + + P+L+HYACMVDLLSR G +  A+  I+ MP  
Sbjct: 604 LLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPIT 663

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            + ++WGALLNGCRIH+ +++ +   K +     ND GY+ LL ++YA+ G WD+  +VR
Sbjct: 664 PDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVR 723

Query: 725 SIMEVTGLKKVPGYSTI 741
             M   GL    G S +
Sbjct: 724 KTMREKGLDHDSGCSWV 740



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 170/560 (30%), Positives = 295/560 (52%), Gaps = 7/560 (1%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF    E D F W V++  Y      EE++ LYH+M+        + +P VLR+C  + D
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 210

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
              G +VH  +++ GF ++  +  +++  Y + G +  ARKVFD M   D +SW+++IA 
Sbjct: 211 WRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAG 270

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +F+N + + GL++F +M+++ V+P+ +T+ S+  A G L  +  A+ +HG  ++R    D
Sbjct: 271 HFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATD 330

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
               NS I MY+  G +  A   F +++ R   SWTAMIS Y ++G+  KALE +  M  
Sbjct: 331 VAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               P+ IT+ + L +CA LG L  G  +H     KG    Y  +  AL+E YA+  ++ 
Sbjct: 391 NNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF-MSYVVVTNALLEMYAKSKRID 449

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +V   + E++++SW+ +I+ +     + EAL     M    + P+S +  ++L+AC 
Sbjct: 450 KAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAALAACA 508

Query: 411 NVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
             G+L+ G +IH HV++     E ++ ++LID+Y KCG    A+  F     K VV WN 
Sbjct: 509 ATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNI 568

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-Y 528
           MI GF  +GN   A++ F+QM       DEVTF+  + ACS  G + +G  + H +   Y
Sbjct: 569 MIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKY 628

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASL 587
            +  ++     + D+ ++ G L  A    + M    +   W A+++   +H  +      
Sbjct: 629 SIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELA 688

Query: 588 FKQMLDSGIKPNEVTFMNIL 607
            K +L+  ++PN+  +  +L
Sbjct: 689 AKYVLE--LEPNDAGYHVLL 706



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 206/412 (50%), Gaps = 3/412 (0%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD    ++L   C    ++ P      H   R       LGN+ + M  + G+   A R 
Sbjct: 92  PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 151

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F K+ +R   SW  M+  Y ++G  ++AL+ + +M+     P++ T   VL SC G+   
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 211

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           R G+ VH  ++R G   E D L  AL+  YA+CG +    KV  ++   + +SWN +I+ 
Sbjct: 212 RMGREVHAHVLRFGFAEEVDVLN-ALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAG 270

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKD 432
           +   G     LEL + M    + P+  ++ S   A G +  +    ++HG  +K     D
Sbjct: 271 HFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATD 330

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
               +SLI MY+  G    A  +F R+  +  + W +MI G+ +NG   +A+ ++  M +
Sbjct: 331 VAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           N +  D++T  +A+ AC+ +G L+ G  +H    S G    + +  AL +MYAK   +  
Sbjct: 391 NNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDK 450

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           A  VF  M E++VVSWS+MI  +  + +  +A   F+ ML + +KPN VTF+
Sbjct: 451 AIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFI 501



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 223/479 (46%), Gaps = 12/479 (2%)

Query: 3   LFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC    + R    +HAH+L  G   +      L+  YA+ G + ++R VFD+    D
Sbjct: 201 VLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMD 260

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  N      + L+  M++++   +     SV  A   L D+   +++HG
Sbjct: 261 CISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHG 320

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K GF  D     S++  Y   G +  AR VF +M +RD +SW+++I+ Y  N    +
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDK 380

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+++  M    V PD +T+ S   AC  L SL     +H     +       + N+ + 
Sbjct: 381 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLE 440

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMIS--CYNRSGWFQKALESFVKMLEVKEEPNL 297
           MY+K   +  A   F  + ++   SW++MI+  C+N   +  +AL  F  ML    +PN 
Sbjct: 441 MYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNF--EALYYFRHML-ADVKPNS 497

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T I  L +CA  G LR GK +H  ++R G+  E  YL  ALI+ Y +CG+         
Sbjct: 498 VTFIAALAACAATGALRSGKEIHAHVLRCGIAYE-GYLPNALIDLYVKCGQTGYAWAQFC 556

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           A G ++++SWN++I+ +   G  + AL    QM   G  PD  +  + L AC   G +  
Sbjct: 557 AHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSE 616

Query: 418 GLQI-HGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMICG 473
           G ++ H    K          + ++D+ S+ G    AY  + E        +W +++ G
Sbjct: 617 GWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNG 675


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 210/617 (34%), Positives = 340/617 (55%), Gaps = 14/617 (2%)

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  ++L     FG    A +VF KM  RDV SW+ ++  Y  +  + E L ++H M+  G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V PD  T   +  +CG +   R  R +H HVLR     +  + N+ + MY+KCGD+++A 
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F  +      SW AMI+ +  +G     LE F+ ML  + +PNL+T+ +V  +   L 
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +   K +H   +++G   +  +   +LI+ YA  G M +   V   +  R+ ++W  +I
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCN-SLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMI 363

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH------GHV 425
           S Y + G   +ALE+   M+   + PD  ++AS+L+AC  +GSL +G+++H      G +
Sbjct: 364 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFI 423

Query: 426 IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
             I      V +++++MY+K    + A  +F+ + +K VV W+SMI GF  N  + EA+ 
Sbjct: 424 SYI-----VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALY 478

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
            F  M  + ++ + VTF+ A+ AC+  G L  GK +H  ++  G+  + Y+  AL D+Y 
Sbjct: 479 YFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYV 537

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG    A   F +   ++VVSW+ MI  +  HG  + A S F QM+  G  P+EVTF+ 
Sbjct: 538 KCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVA 597

Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L ACS  G V EG   F++M   + + P+L+HYACMVDLLSR+G +  A+  I+ MP  
Sbjct: 598 LLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPIT 657

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            + ++WGALLNGCRIH+ +++ +   K +     ND GY+ LL ++YA+   WD+  +VR
Sbjct: 658 PDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVR 717

Query: 725 SIMEVTGLKKVPGYSTI 741
             M   GL    G S +
Sbjct: 718 KTMREKGLDHDSGCSWV 734



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 167/560 (29%), Positives = 296/560 (52%), Gaps = 7/560 (1%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF    E D F W V++  Y  +   +E++ LYH+M+        + +P VLR+C  + D
Sbjct: 145 VFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 204

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
              G +VH  +++ GF ++  +  +++  Y + G +  ARKVFD MT  D +SW+++IA 
Sbjct: 205 WRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAG 264

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +F+N + + GL++F +M+ + V+P+ +T+ S+  A G L  +  A+ +HG  ++R    D
Sbjct: 265 HFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGD 324

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
               NS I MY+  G +  A   F +++ R   +WTAMIS Y ++G+  KALE +  M  
Sbjct: 325 VAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEV 384

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               P+ IT+ + L +CA LG L  G  +H     KG    Y  +  A++E YA+  ++ 
Sbjct: 385 NNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF-ISYIVVTNAILEMYAKSKRID 443

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +V   + E++++SW+ +I+ +     + EAL     M    + P+S +  ++L+AC 
Sbjct: 444 KAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAALAACA 502

Query: 411 NVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
             G+L+ G +IH HV++   + E ++ ++LID+Y KCG    A+  F     K VV WN 
Sbjct: 503 ATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNI 562

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SY 528
           MI GF  +G+   A++ F+QM       DEVTF+  + ACS  G + +G  + H +   Y
Sbjct: 563 MIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKY 622

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASL 587
            +  ++     + D+ ++ G L  A    + M    +   W A+++   +H  +      
Sbjct: 623 SIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELA 682

Query: 588 FKQMLDSGIKPNEVTFMNIL 607
            K +L   ++PN+  +  +L
Sbjct: 683 AKYVL--ALEPNDAGYHVLL 700



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 227/457 (49%), Gaps = 3/457 (0%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD    ++L   C    ++ P      H   R       LGN+ + M  + G+   A R 
Sbjct: 86  PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 145

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F K+ +R   SW  M+  Y +SG   +AL+ + +M+     P++ T   VL SC G+   
Sbjct: 146 FAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 205

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           R G+ VH  ++R G G E D L  AL+  YA+CG +    KV  ++   + +SWN +I+ 
Sbjct: 206 RMGREVHAHVLRFGFGEEVDVLN-ALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAG 264

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKD 432
           +   G     LEL + M    + P+  ++ S   A G +  +    ++HG  +K     D
Sbjct: 265 HFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGD 324

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
               +SLI MY+  G    A  +F R+  +  + W +MI G+ +NG   +A+ ++  M +
Sbjct: 325 VAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEV 384

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           N +  D++T  +A+ AC+ +G L+ G  +H    S G    I +  A+ +MYAK   +  
Sbjct: 385 NNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDK 444

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A  VF  M E++VVSWS+MI  +  + +  +A   F+ ML + +KPN VTF+  L AC+ 
Sbjct: 445 AIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAA 503

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           +G++  GK     +   G+E +      ++DL  + G
Sbjct: 504 TGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCG 540



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 223/480 (46%), Gaps = 14/480 (2%)

Query: 3   LFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC    + R    +HAH+L  G   +      L+  YA+ G + ++R VFD+    D
Sbjct: 195 VLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMD 254

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  N      + L+  M+ ++   +     SV  A   L D+   +++HG
Sbjct: 255 CISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHG 314

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K GF  D     S++  Y   G +  AR VF +M +RD ++W+++I+ Y  N    +
Sbjct: 315 LAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDK 374

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L+++  M    V PD +T+ S   AC  L SL     +H     +       + N+ + 
Sbjct: 375 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILE 434

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMIS--CYNRSGWFQKALESFVKMLEVKEEPNL 297
           MY+K   +  A   F  + ++   SW++MI+  C+N   +  +AL  F  ML    +PN 
Sbjct: 435 MYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNF--EALYYFRHML-ADVKPNS 491

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVI 356
           +T I  L +CA  G LR GK +H  ++R G+  EY+ YL  ALI+ Y +CG+        
Sbjct: 492 VTFIAALAACAATGALRSGKEIHAHVLRCGI--EYEGYLPNALIDLYVKCGQTGYAWAQF 549

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
            A G ++++SWN++I+ +   G    AL    QM   G  PD  +  + L AC   G + 
Sbjct: 550 CAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVS 609

Query: 417 LGLQI-HGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMICG 473
            G ++ H    K          + ++D+ S+ G    AY  + E        +W +++ G
Sbjct: 610 EGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNG 669


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 209/654 (31%), Positives = 341/654 (52%), Gaps = 20/654 (3%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           SNF    +LR     G + +  KV+  +      K+ V   +++  Y + G L  AR +F
Sbjct: 47  SNFTVEDLLRR----GQVSAALKVYDEMPH----KNTVSTNTMISGYVKMGDLSSARHLF 98

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D M  R VV+W+ ++  Y  N    E  K+F  M R    PD+VT  +L   C +     
Sbjct: 99  DAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQN 158

Query: 214 PARSIHGHVLRRKIKIDGPLG----NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
               +H   +  K+  D  L     N  +  Y +   L  A   F +I  + + ++  +I
Sbjct: 159 AVGQVHAFAV--KLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLI 216

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y + G + +A+  F+KM +   +P+  T   VL +  GL     G+ +H   +  G  
Sbjct: 217 TGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFS 276

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   +G  ++ FY++  ++ E   + + + E + +S+N++IS Y++    +E+L L  +
Sbjct: 277 RDAS-VGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFRE 335

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCG 447
           MQ  G    +F  A+ LS   N+ SLQ+G Q+H   I +   D    V +SL+DMY+KC 
Sbjct: 336 MQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAI-VATADSILHVGNSLVDMYAKCE 394

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
             + A L+F+ + Q+S V W ++I G+ Q G     + LF +M    L  D+ TF T ++
Sbjct: 395 MFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLK 454

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           A +    L  GK +H  +I  G  ++++  + L DMYAKCG ++ A +VF+ M +RN VS
Sbjct: 455 ASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 514

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+A+I  Y  +G    A   F +M+ SG++P+ V+ + +L ACSH G VE+G  +F AM 
Sbjct: 515 WNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMS 574

Query: 628 -IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
            I+G+ P  +HYACM+DLL R+G    A K++  MPF  +  +W ++LN CRI+K   + 
Sbjct: 575 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLA 634

Query: 687 -KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            +  E+  S+    D   Y  +SNIYA  G W+    V+  M   G+KKVP YS
Sbjct: 635 ERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYS 688



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 156/612 (25%), Positives = 295/612 (48%), Gaps = 6/612 (0%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H +  ++  +I  Y +MG L S+R +FD   +     W +L+  Y  NN F+E+  L+ +
Sbjct: 72  HKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQ 131

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ--TSILCTYGEF 143
           M R         + ++L  C+      +  +VH   +K GFD +  +     +L +Y E 
Sbjct: 132 MCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEV 191

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
             LD A  +F+++  +D V+++++I  Y  +   +E + +F  M + G +P   T   + 
Sbjct: 192 RRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVL 251

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +A   L      + +HG  +      D  +GN  +  YSK   +L     F ++ +    
Sbjct: 252 KAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFV 311

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           S+  +IS Y+++  ++++L  F +M  +  +       T+L   A L  L+ G+ VHCQ 
Sbjct: 312 SYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQA 371

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I         ++G +L++ YA+C    E E +  ++ +R+ +SW  LIS Y +KG+    
Sbjct: 372 I-VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAG 430

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDM 442
           L+L  +M+   L  D  + A+ L A     SL LG Q+H  +I+  + ++ F  S L+DM
Sbjct: 431 LKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 490

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y+KCG    A  +FE +  ++ V WN++I  +  NG+   AI  F +M  + L+ D V+ 
Sbjct: 491 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSI 550

Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           L  + ACS+ G +E+G      +   YG+         + D+  + G    A+++ D M 
Sbjct: 551 LGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 610

Query: 562 -ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            E + + WS++++   ++   + A    +Q+       +   ++++    + +G  E  +
Sbjct: 611 FEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVR 670

Query: 621 FYFNAMRIFGVE 632
               AMR  G++
Sbjct: 671 HVKKAMRERGIK 682



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 184/387 (47%), Gaps = 16/387 (4%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH   + TG   D     +++  Y++   +  +R +F+   E D   + V+I  Y    
Sbjct: 265 QLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAE 324

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            +EES+ L+ +M        NF + ++L   ++L  L  G +VH + I    D    +  
Sbjct: 325 QYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGN 384

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y +    D+A  +F  ++ R  VSW+++I+ Y        GLK+F  M    +  
Sbjct: 385 SLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRA 444

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T  ++ +A     SL   + +H  ++R     +   G+  + MY+KCG +  A + F
Sbjct: 445 DQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 504

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  R   SW A+IS Y  +G  + A+ +F KM++   +P+ ++++ VL +C+  G++ 
Sbjct: 505 EEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVE 564

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPA------LIEFYAECGKMSECEKVIHAIG-ERNILSW 367
           +G         + M P Y  + P       +++     G+ +E EK++  +  E + + W
Sbjct: 565 QGTEFF-----QAMSPIYG-ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 618

Query: 368 NMLISE---YARKGMSKEALELLVQMQ 391
           + +++    Y  + +++ A E L  M+
Sbjct: 619 SSVLNACRIYKNQSLAERAAEQLFSME 645



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 5/204 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHA ++ +G   +  + + L++ YA+ GS++ +  VF+   + ++  W  LI  Y  N 
Sbjct: 467 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNG 526

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC-GFDKDDVIQ 133
             E +I  + KMI+      +     VL ACS  G +  G +    +    G        
Sbjct: 527 DGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHY 586

Query: 134 TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIAS---YFDNADVSEGLKMFHSMVR 189
             +L   G  G   +A K+ D+M    D + WSS++ +   Y + +      +   SM +
Sbjct: 587 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEK 646

Query: 190 EGVEPDFVTMLSLAEACGELCSLR 213
                 +V+M ++  A G+  ++R
Sbjct: 647 LRDAAAYVSMSNIYAAAGKWENVR 670


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 210/652 (32%), Positives = 347/652 (53%), Gaps = 10/652 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y S+L   ++   +   + +H  +I  G     ++ T +  TY   G +  ARK+F++M 
Sbjct: 18  YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMP 76

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE--PDFVTMLSLAEACGELCSLRPA 215
              ++S++ +I  Y       + + +F  MV EGV+  PD  T   +A+A GEL S++  
Sbjct: 77  QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             +HG +LR     D  + N+ + MY   G +  A   F  ++ R   SW  MIS Y R+
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G+   AL  F  M+    + +  T++++L  C  L  L  G++VH  +  K +G + + +
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE-V 255

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL+  Y +CG+M E   V   +  R++++W  +I+ Y   G  + ALEL   MQ  G+
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYL 454
            P++ ++AS +S CG+   +  G  +HG  ++     D  +++SLI MY+KC   +L + 
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F    +     W+++I G  QN    +A+ LF +M    +E +  T  + + A + +  
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER----NVVSWSA 570
           L +   +H  L   G    +   T L  +Y+KCG L++A ++F+ + E+    +VV W A
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           +I  YGMHG  ++A  +F +M+ SG+ PNE+TF + L ACSHSG VEEG   F  M   +
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
                  HY C+VDLL R+G ++ A+ +I ++PF    ++WGALL  C  H+ + + +  
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             +L      + G Y LL+NIYA  G W +  KVRS+ME  GL+K PG+STI
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 171/680 (25%), Positives = 334/680 (49%), Gaps = 51/680 (7%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +  ++ K   LH H+ +TG        + L  +YA  G +  +R +F+   +     +
Sbjct: 25  FAATQSISKTKALHCHV-ITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSY 83

Query: 64  AVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            ++I+ Y+    + ++I ++ +M+ E  +     + YP V +A   L  +  G  VHGRI
Sbjct: 84  NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           ++  F +D  +Q ++L  Y  FG ++ AR VFD M +RDV+SW+++I+ Y+ N  +++ L
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            MF  MV E V+ D  T++S+   CG L  L   R++H  V  +++     + N+ + MY
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KCG +  A   F ++E+R   +WT MI+ Y   G  + ALE    M      PN +T+ 
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIA 323

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +++  C     + +GK +H   +R+ +  +   +  +LI  YA+C ++  C +V     +
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQQVYSDI-IIETSLISMYAKCKRVDLCFRVFSGASK 382

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            +   W+ +I+   +  +  +AL L  +M+   + P+  ++ S L A   +  L+  + I
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNI 442

Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQ----KSVVMWNSMICGFYQ 476
           H ++ K          + L+ +YSKCG    A+ +F  IQ+    K VV+W ++I G+  
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +G+   A+ +F +M  + +  +E+TF +A+ ACS+ G +E+G  +   ++ +        
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH-------- 554

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                               + +++  N   ++ ++D  G  G+L++A +L   +     
Sbjct: 555 --------------------YKTLARSN--HYTCIVDLLGRAGRLDEAYNLITTI---PF 589

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDL---LSRSGDIE 652
           +P    +  +L AC    +V+ G+   N  ++F +EP+   +Y  + ++   L R  D+E
Sbjct: 590 EPTSTVWGALLAACVTHENVQLGEMAAN--KLFELEPENTGNYVLLANIYAALGRWKDME 647

Query: 653 GAFKMIHSMPF---PANGSI 669
               M+ ++     P + +I
Sbjct: 648 KVRSMMENVGLRKKPGHSTI 667



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 21/241 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE--- 57
           +P + +  +LR+   +H +L  TG      A+T L+  Y++ G+L S+  +F+  +E   
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486

Query: 58  -PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             D  +W  LI  Y  +     ++ ++ +M+R   T +   + S L ACS  G +  G  
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546

Query: 117 VHGRIIKCGFDKDDVIQ-----TSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIAS 170
               + +   +    +      T I+   G  G LD+A  +   +      + W +++A+
Sbjct: 547 ----LFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602

Query: 171 YFDNADVSEGLKMFHSMVREGVEPD----FVTMLSLAEACGELCSLRPARSIHGHV-LRR 225
              + +V  G +M  + + E +EP+    +V + ++  A G    +   RS+  +V LR+
Sbjct: 603 CVTHENVQLG-EMAANKLFE-LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660

Query: 226 K 226
           K
Sbjct: 661 K 661


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 212/728 (29%), Positives = 358/728 (49%), Gaps = 5/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA     GL  +    T L+  Y   G + +++ +F    + +   W  ++     N  
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE+++ Y +M +E    +     +V+  C +L D  +G +V   ++  G      +  S
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  +G    + DA ++FD+M  RD +SW+++I+ Y      S+   +   M    V+PD
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ SL   C     +     IH   +   +    PL N+ + MYS  G L  AE  F 
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLR 314
            + +R   SW  MIS Y +S    +ALE+  ++L+  E  PN +T  + LG+C+    L 
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALM 365

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+++H  I+++ +      +G +L+  Y++C  M + E+V  ++   +++S N+L   Y
Sbjct: 366 NGRTIHAMILQRSL-QNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGY 424

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-LGLQIHGHVIKIDC-KD 432
           A       A+ +   M+  G+ P+  ++ +    C ++G L   G+ +H +V +     D
Sbjct: 425 AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSD 484

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           E++ +SLI MY+ CG    +  +F RI  KSV+ WN++I    ++G   EAI LF     
Sbjct: 485 EYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH 544

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
              ++D       + + +N+  LE+G  +H   +  G+  D ++  A  DMY KCG +  
Sbjct: 545 AGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC 604

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
             +     + R    W+ +I  Y  +G   +A   FK M+  G KP+ VTF+ +L ACSH
Sbjct: 605 MLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSH 664

Query: 613 SGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G +++G  Y+N+M   FGV P ++H  C+VDLL R G    A K I  MP   N  IW 
Sbjct: 665 AGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWR 724

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL+  R HK +D+ +   K L      D+  Y LLSN+YA    W +  K+RS M+   
Sbjct: 725 SLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIK 784

Query: 732 LKKVPGYS 739
           L K P  S
Sbjct: 785 LNKRPACS 792



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 290/610 (47%), Gaps = 13/610 (2%)

Query: 76  FEESILLYHKMIREQ-ATISNFIYPSVLRACSSLG---DLGSGEKVHGRIIKCGFDKDDV 131
            E +     +++RE+   +S F   S++ AC   G       G  +H    + G   +  
Sbjct: 21  LESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVY 80

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           I T++L  YG  G + +A+++F +M  R+VVSW++I+ +   N  + E L  +  M +EG
Sbjct: 81  IGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG 140

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V  +   + ++   CG L        +  HV+   +     + NS I M+     +  AE
Sbjct: 141 VMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAE 200

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R F ++E+R   SW AMIS Y+    + K       M   + +P++ TL +++  CA   
Sbjct: 201 RLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSD 260

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +  G  +H   +  G+      +  AL+  Y+  GK+ E E +   +  R+++SWN +I
Sbjct: 261 LVALGSGIHSLCVSSGLHCSVPLIN-ALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMI 319

Query: 372 SEYARKGMSKEALELLVQ-MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           S Y +     EALE L Q +QT    P+S + +S+L AC +  +L  G  IH  +++   
Sbjct: 320 SSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSL 379

Query: 431 KDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           ++   + +SL+ MYSKC        +FE +    VV  N +  G+    +   A+ +F  
Sbjct: 380 QNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSW 439

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           M    ++ + +T +     C ++G L   G  +H  +   G+  D YI  +L  MYA CG
Sbjct: 440 MRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCG 499

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           DL+++  +F  ++ ++V+SW+A+I     HG+  +A  LF     +G K +       L 
Sbjct: 500 DLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLS 559

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-- 666
           + ++  S+EEG          G++ D       +D+  + G ++    M+ ++P PA+  
Sbjct: 560 SSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC---MLKTLPDPAHRP 616

Query: 667 GSIWGALLNG 676
              W  L++G
Sbjct: 617 TQCWNTLISG 626


>gi|357131661|ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Brachypodium distachyon]
          Length = 924

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 382/736 (51%), Gaps = 14/736 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  +   L  D      L++ YA+ GS   S  VF +    D+  W  +     +N  
Sbjct: 192 LHAAAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGL 251

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-GEKVHGRIIKCGFDKDDV--I 132
            E S   + +MIR           SV+ A S    L S GE VHG I+K G++      +
Sbjct: 252 SEVSACYFREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSV 311

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             S++  Y EFG  +DA KVF ++  ++ VSW+ +I    +N    E L +F  M+ E  
Sbjct: 312 ANSLITFYFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREMLSE-C 370

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAE 251
           +PDF T++++  +CG+   L   ++IHG++ R+ +  ++  LGNS + +Y KC D  +A 
Sbjct: 371 QPDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTAN 430

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALES-FVKMLEVKEEPNLITLITVLGSCAGL 310
             F  +  R   SW  M+S Y+R    ++  ++ F ++L       + T++ V+ SC+  
Sbjct: 431 LLFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCP 490

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNM 369
             LR GK+VH  +++ G       +  AL+  Y  CG       ++ +I    +I+SWN 
Sbjct: 491 EDLRFGKAVHSFVLKYGFASGVSVVN-ALMHMYICCGDSLVAFTLLGSIMPVSDIISWNT 549

Query: 370 LISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK- 427
            +    + G+ + ALE    M +   L PDS ++ S LSACG +    LG  IH   +K 
Sbjct: 550 AVVGCVQNGLHRGALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKR 609

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
           +   +  V+++L+ MY +      A L+F  +  +++  WN M+ GF QN +   A+  +
Sbjct: 610 LLVFNLRVKNALLTMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFY 669

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            +M       +E+  ++ I AC+ +  +  GK +H  ++   ++ ++++  +L DMY+KC
Sbjct: 670 QKM--EKFVPNEMCTVSIICACTQLRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKC 727

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G L  A RVF+S +E+++  W++MI  +G HG    +  LF  M+ SG+K    TF+ +L
Sbjct: 728 GRLDIAVRVFESSTEKSIACWNSMISAFGFHGHGLRSIELFCSMIHSGMKATRSTFIALL 787

Query: 608 WACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
            ACSH+G  +EG  Y+N M   FG+ P  +H+ C+VD+L R+G ++ A K + S+P    
Sbjct: 788 SACSHAGLTDEGLKYYNLMSEKFGITPTPEHHVCIVDMLGRAGRLQEAHKFVESLPKSKE 847

Query: 667 G-SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
              +WGALL+ C     + + + I ++L      ++GYY  +SN+YA +  W    +VR 
Sbjct: 848 AHGVWGALLSACSNKSELRMGEAIARQLLCLEPENSGYYVTISNLYAYQDMWGGAVQVRD 907

Query: 726 IMEVTGLKKVPGYSTI 741
           I++   L K  G+S +
Sbjct: 908 ILQDKRLMKPHGHSIV 923



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 175/663 (26%), Positives = 310/663 (46%), Gaps = 26/663 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGS-----LRSSRLVFDTFKEPDSFMWAVLIKCY 70
           LH   L +G   DPP  T L+ +YA   S      R++ ++F   ++PD  +W  +I   
Sbjct: 85  LHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLFHEAEDPDVILWNAVIGAL 144

Query: 71  MWNNFFEESILLYHKM--IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
                  +++ L+ +M  +R +A  S  +   +L   S  G+L  G  +H   +K   D 
Sbjct: 145 TRACRLGDAVALFRRMAGVRGEAFDSTTVV-VMLSGASRAGELDLGMALHAAAVKRRLDT 203

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  +  +++  Y + G   D+  VF  M   D  SW+S+      N         F  M+
Sbjct: 204 DMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSACYFREMI 263

Query: 189 REGVEPDFVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCG 245
           R  V+ D VT+ S+  A      L     S+HG +++   +   P  + NS I  Y + G
Sbjct: 264 RLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLITFYFEFG 323

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
               AE+ F++I K+   SW  MI     +    +AL  F +ML  + +P+  TL+ V+ 
Sbjct: 324 FPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREMLS-ECQPDFATLVAVIL 382

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           SC   G L EGK++H  I RK +      LG +L+  Y +C        +   +  R+++
Sbjct: 383 SCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLFRTMPIRDLI 442

Query: 366 SWNMLISEYAR-KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           SWN ++S Y+R   + +EA  +  ++ + GL     ++ + + +C     L+ G  +H  
Sbjct: 443 SWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGKAVHSF 502

Query: 425 VIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLE 482
           V+K        V ++L+ MY  CG   +A+ L   I   S ++ WN+ + G  QNG    
Sbjct: 503 VLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIMPVSDIISWNTAVVGCVQNGLHRG 562

Query: 483 AINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           A+  F  M+ +  L  D +T ++ + AC  +     GK +H   +   +  ++ +  AL 
Sbjct: 563 ALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRVKNALL 622

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
            MY +  D ++A+ +F S+ +RN+ SW+ M+  +  +     A   +++M      PNE+
Sbjct: 623 TMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKM--EKFVPNEM 680

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH----YACMVDLLSRSGDIEGAFKM 657
             ++I+ AC+    V  GK     +    V+ DLQ+     A +VD+ S+ G ++ A ++
Sbjct: 681 CTVSIICACTQLRDVRHGKSIHGHV----VKSDLQNNVFLSASLVDMYSKCGRLDIAVRV 736

Query: 658 IHS 660
             S
Sbjct: 737 FES 739



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 223/477 (46%), Gaps = 22/477 (4%)

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCG-----DLLSAERTFVKIEKRCTTSWTAMISC 271
           S+H   L+    +D P+  S +  Y++C      D  +A   F + E      W A+I  
Sbjct: 84  SLHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLFHEAEDPDVILWNAVIGA 143

Query: 272 YNRSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
             R+     A+  F +M  V+ E  +  T++ +L   +  G L  G ++H   +++ +  
Sbjct: 144 LTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGELDLGMALHAAAVKRRLDT 203

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           + + L  AL++ YA+CG   + E V  ++   +  SWN +       G+S+ +     +M
Sbjct: 204 DMN-LWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSACYFREM 262

Query: 391 QTWGLMPDSFSVASSLSACGNV-GSLQLGLQIHGHVIKIDCKDEF---VQSSLIDMYSKC 446
               +  D  +++S +SA     G    G  +HG ++K+  +D     V +SLI  Y + 
Sbjct: 263 IRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLITFYFEF 322

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           GF   A  +F RI +K+ V WN MI G  +N  + EA+ +F +M   C + D  T +  I
Sbjct: 323 GFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREMLSEC-QPDFATLVAVI 381

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIY-----IDTALTDMYAKCGDLQTAQRVFDSMS 561
            +C + G L +GK +H     Y  RK ++     +  +L  +Y KC D  TA  +F +M 
Sbjct: 382 LSCGDQGLLCEGKAIH----GYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLFRTMP 437

Query: 562 ERNVVSWSAMIDCYGMHGQLN-DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            R+++SW+ M+  Y     L  +A ++F+++L  G+     T + ++ +CS    +  GK
Sbjct: 438 IRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGK 497

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
              + +  +G    +     ++ +    GD   AF ++ S+   ++   W   + GC
Sbjct: 498 AVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIMPVSDIISWNTAVVGC 554



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 15/220 (6%)

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF-----KNLAYLLFERIQQKSV 464
           G+V SL       G V+     D  V++SL+  Y++C          A +LF   +   V
Sbjct: 80  GSVESLHCAALKSGAVL-----DPPVRTSLLAAYARCPSGGDHDARAALVLFHEAEDPDV 134

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           ++WN++I    +     +A+ LF +M  +     D  T +  +   S  G+L+ G  +H 
Sbjct: 135 ILWNAVIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGELDLGMALHA 194

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             +   +  D+ +  AL DMYAKCG    ++ VF SM   +  SW+++      +G    
Sbjct: 195 AAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEV 254

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           +A  F++M+   ++ +EVT  +++ A S +    EG F F
Sbjct: 255 SACYFREMIRLAVQADEVTLSSVISASSRA----EGLFSF 290


>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
 gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
          Length = 720

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 208/704 (29%), Positives = 361/704 (51%), Gaps = 21/704 (2%)

Query: 6   SCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C +L+ L+    +HA +   G   D      LI  Y++  S   +R VFD     DS  
Sbjct: 3   ACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDSVS 62

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG----DLGSGEKVH 118
           W  +I  Y  N F EE++ ++H+M         +   S L  C  L      L  G ++H
Sbjct: 63  WNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGREIH 122

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            RI   GF  D  +QT ++  YG+FG + +AR++FD M+ R  ++W+ +I +Y  N   +
Sbjct: 123 RRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGFGN 182

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E ++++  +    V PD V   S+ +AC    +L   + IH  ++  K +ID  + N+ +
Sbjct: 183 EAIELYKQI---DVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNTLL 239

Query: 239 VMYSKCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEP 295
            +Y  CG L  A+  F  +++  R   SW ++I  +  +   ++AL  F +M E      
Sbjct: 240 DLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQ 299

Query: 296 NLITLITVLGSCAGLG--WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           + ++ ++ L +C+ +G   L  GK++H  I+   +  +  Y+G AL+  Y  CG + E +
Sbjct: 300 DRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDV-YVGTALVTMYGRCGDVVEAK 358

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V   +  +N ++W  +I  Y+  G ++EA+E+  +M+  G   D     + + A   V 
Sbjct: 359 QVFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVE 418

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS--VVMWNSM 470
            +++  +IH  + ++  C D  +QSSLI M+ KCG    A  +F+ +++KS     WN+M
Sbjct: 419 DVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAM 478

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I  + + G+    + LF  M    +  D  TFL  +    +    E    V H ++S G+
Sbjct: 479 IAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLLAVGGSFSPSEASA-VQHAILSTGM 537

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             D  + TAL +   + G +  A+RVFD + +R+VVSW++M+  Y  HG   +A  LF++
Sbjct: 538 ETDSLVGTALLNTLTRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQE 597

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSG 649
           M   G++P+EV F+ +L+AC+H+G    G  YF +MR  + +E    HY C+VDLL R+G
Sbjct: 598 MQLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLEAGADHYCCVVDLLGRAG 657

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            +  A  +I SMPF  + + W AL+  C  H  ++    I + +
Sbjct: 658 RLADAEDLIVSMPFKPDEATWSALVGACNTHGDVERAARISRAM 701



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 180/572 (31%), Positives = 293/572 (51%), Gaps = 17/572 (2%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           L AC SL  L  G  VH  + + GF  D V+  +++  Y +     DAR VFD MT RD 
Sbjct: 1   LDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDS 60

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS-LAEACGELC---SLRPARS 217
           VSW+++IA+Y  N    E +++FH M   G+ PD  T++S L   CG  C    L+  R 
Sbjct: 61  VSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGRE 120

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  +       D  L    I MY K G+++ A R F  + +R   +W  MI+ Y ++G+
Sbjct: 121 IHRRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGF 180

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +A+E + K ++V   P+ +   +VL +C+    L EGK +H +I+ +G       +  
Sbjct: 181 GNEAIELY-KQIDVV--PDKVIFASVLDACSSAMNLEEGKRIHARIV-EGKFEIDTVVNN 236

Query: 338 ALIEFYAECGKMSECEKVIHAIGE--RNILSWNMLISEYARKGMSKEALELLVQMQ-TWG 394
            L++ Y  CG + E + V H++ E  R+++SWN +I  +      KEAL L  +MQ   G
Sbjct: 237 TLLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACG 296

Query: 395 LMPDSFSVASSLSACGNVGS--LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL 451
              D  S  S+L AC  +GS  L  G  +HG ++      D +V ++L+ MY +CG    
Sbjct: 297 PRQDRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVE 356

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F+ +  K+ V W SMI G+  NG + EA+ +F +M       D++ ++  ++A   
Sbjct: 357 AKQVFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRG 416

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWS 569
           +  ++    +H +L   G   D  I ++L  M+ KCG ++ A+RVFD+M E  R   +W+
Sbjct: 417 VEDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWN 476

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           AMI  Y   G       LF+ M  + ++P+  TF+ +L A   S S  E     +A+   
Sbjct: 477 AMIAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLL-AVGGSFSPSEASAVQHAILST 535

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           G+E D      +++ L+RSG +  A ++   +
Sbjct: 536 GMETDSLVGTALLNTLTRSGKVGEARRVFDRL 567



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 8/298 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD- 59
           M   R   +++   ++H+ L   G   D    + LI  + + GS+ ++R VFD  +E   
Sbjct: 411 MEASRGVEDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSR 470

Query: 60  -SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
            S  W  +I  Y      E  + L+  M           +  +L    S         V 
Sbjct: 471 GSPAWNAMIAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLLAVGGSFSP-SEASAVQ 529

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I+  G + D ++ T++L T    G + +AR+VFD++  RDVVSW+S++ +Y  +    
Sbjct: 530 HAILSTGMETDSLVGTALLNTLTRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSL 589

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN--S 236
           E + +F  M  +G+EPD V  L++  AC      R         +R    ++    +   
Sbjct: 590 EAIDLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFAS-MRGDYDLEAGADHYCC 648

Query: 237 FIVMYSKCGDLLSAERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            + +  + G L  AE   V +  K    +W+A++   N  G  ++A     + +E +E
Sbjct: 649 VVDLLGRAGRLADAEDLIVSMPFKPDEATWSALVGACNTHGDVERAAR-ISRAMEAEE 705


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 214/682 (31%), Positives = 372/682 (54%), Gaps = 11/682 (1%)

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           IK   ++  ++E++ LYH++    A +S+ ++ PS+L+ACS+      G  +HG +IK G
Sbjct: 19  IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNLGTAMHGCLIKQG 77

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
                 I  S +  Y ++G LD A++ FD   ++D VSW+ ++   F N  +  GL  F 
Sbjct: 78  CQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFI 137

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
                  +P+  ++L + +A  EL       + HG++ R        + NS + +Y++  
Sbjct: 138 KGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV- 196

Query: 246 DLLSAERTFVKIEKRC-TTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITV 303
            +  A + F ++  R    SW+ MI  + + G  ++    F  M+ E    P+ +T+++V
Sbjct: 197 HMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSV 256

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +C  L  +  G  VH  +I +G+  +  ++G +LI+ Y++C  +    K    I E+N
Sbjct: 257 LKACTNLKDISLGTMVHGLVIFRGLEDDL-FVGNSLIDMYSKCFNVHSAFKAFKEIPEKN 315

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           I+SWN+++S Y       EAL LL  M   G   D  ++A+ L    +         +HG
Sbjct: 316 IISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHG 375

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            +I+   + +E + +S+ID Y+KC    LA ++F+ + +K VV W++MI GF +NG   E
Sbjct: 376 VIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDE 435

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           AI++F QM    +  + V+ +  ++AC+   +L + KW H   +  G+  ++ I T++ D
Sbjct: 436 AISVFKQMNEEVIP-NNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIID 494

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCGD++ + R F+ + ++NVV WSAMI  + ++G  ++A  LF+++  +G KPN VT
Sbjct: 495 MYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVT 554

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            +++L ACSH G +EEG  +F +M +  G+EP L+HY+C+VD+LSR+G    A ++I  +
Sbjct: 555 ALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKL 614

Query: 662 P--FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
           P    A  SIWG LL+ CR +  I +       +       +  Y L SN+YA  G   +
Sbjct: 615 PKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMID 674

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             K+R + +  G+K V GYS +
Sbjct: 675 SAKMRRLAKEKGVKVVAGYSLV 696



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 287/573 (50%), Gaps = 21/573 (3%)

Query: 3   LFRSCTN--LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + ++C+N      T +H  L+  G       +   I+ Y + G L S++  FD+ K  DS
Sbjct: 54  ILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDS 113

Query: 61  FMWAVLIKCYMWNNFFEESIL------LYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V++      NF   SI+      +  +    Q  IS+ +   V++A   L     G
Sbjct: 114 VSWNVMVH----GNFSNGSIMAGLCWFIKGRFAHFQPNISSLLL--VIQAFRELKIYSQG 167

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFD 173
              HG I + GF     +Q S+L  Y E   +  A K+F +M+ R DVVSWS +I  +  
Sbjct: 168 FAFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAYKLFGEMSVRNDVVSWSVMIGGFVQ 226

Query: 174 NADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
             +  +G  MF +MV E G+ PD VT++S+ +AC  L  +     +HG V+ R ++ D  
Sbjct: 227 IGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLF 286

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +GNS I MYSKC ++ SA + F +I ++   SW  M+S Y  +    +AL     M+   
Sbjct: 287 VGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREG 346

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            E + +TL  VL          + +SVH  IIRKG     + L  ++I+ YA+C  +   
Sbjct: 347 AEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGY-ESNELLLNSVIDAYAKCNLVELA 405

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             V   + ++++++W+ +I+ +AR G   EA+ +  QM    ++P++ S+ + + AC   
Sbjct: 406 RMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVS 464

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             L+     HG  ++     E  + +S+IDMYSKCG    +   F +I QK+VV W++MI
Sbjct: 465 AELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMI 524

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGV 530
             F  NG + EA+ LF ++  N  + + VT L+ + ACS+ G +E+G      ++  +G+
Sbjct: 525 SAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGI 584

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
              +   + + DM ++ G    A  + + + + 
Sbjct: 585 EPGLEHYSCIVDMLSRAGKFNEALELIEKLPKE 617



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 217/421 (51%), Gaps = 15/421 (3%)

Query: 1   MPLFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++CTNL+ +   T +H  ++  GL  D      LI+ Y++  ++ S+   F    E
Sbjct: 254 VSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPE 313

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W +++  Y+ N    E++ L   M+RE A        +VL+      D      V
Sbjct: 314 KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSV 373

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG II+ G++ ++++  S++  Y +   ++ AR VFD M  +DVV+WS++IA +  N   
Sbjct: 374 HGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKP 433

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E + +F  M  E V P+ V++++L EAC     LR ++  HG  +RR +  +  +G S 
Sbjct: 434 DEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSI 492

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKCGD+ ++ R F +I ++    W+AMIS +  +G   +AL  F K+ +   +PN 
Sbjct: 493 IDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNA 552

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +T +++L +C+  G + EG S    +++K G+ P  ++    +++  +  GK +E  ++I
Sbjct: 553 VTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHY-SCIVDMLSRAGKFNEALELI 611

Query: 357 HAIG---ERNILSWNMLIS---EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA-C 409
             +    E     W  L+S    Y    +   A   ++Q++   L    + +AS+L A C
Sbjct: 612 EKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEP--LSSAGYMLASNLYANC 669

Query: 410 G 410
           G
Sbjct: 670 G 670


>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 726

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 217/641 (33%), Positives = 350/641 (54%), Gaps = 13/641 (2%)

Query: 110 DLGSGEKVHGRI-IKCGFDKD-DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           DL + +++H  + +  GF++      T ++  Y +F  L+ A  VF  +   + +SW+ I
Sbjct: 40  DLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLI 99

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS-LRPARSIHGHVLRRK 226
           + ++ D   V+E L ++  M   GV+ D  T  ++  A   L S +   + +H   ++  
Sbjct: 100 MRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLG 159

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              D    N+ I +Y++CG +      F ++  R   SWT+MIS Y   G    A E F 
Sbjct: 160 FGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFN 219

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           KM  ++ EPN +TLI +L  C       EG+ +HC II+ G+   Y  +  +++  Y+  
Sbjct: 220 KM-RLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGL-LIYGSVQNSILRMYSIT 277

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASS 405
           G   E E +   I  R+++SWN LI  YA +G ++E +    QM+    L  ++ ++  S
Sbjct: 278 GSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTLVIS 337

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           + A   +G+L  G ++H   IK+   D+ + +SL+D Y+KCG    +  LF  I  +S  
Sbjct: 338 VFA--KIGNLVEGEKLHSFSIKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSS 395

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            W  M+ G  QNG   EAI+LF QM  + +++      + + ACS++G L+  K +H  L
Sbjct: 396 TWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYL 455

Query: 526 IS---YGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
                Y +  D I++ T++ +MY +CG + +A+  F+ M  ++ ++W++MI+ YG+HG  
Sbjct: 456 TRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMA 515

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYAC 640
            +A  LF QML   + PN VTF+++L ACSHSG + +G   F +M+ +FG+EPDL HY C
Sbjct: 516 IEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTC 575

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDLL R G I+ A  MI  M   A+  IWGAL+  CR+H    V +   + L    +++
Sbjct: 576 MVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESDN 635

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            GYYTLLSNI A  G WDE  +VR ++    L+K PG+S I
Sbjct: 636 VGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCI 676



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 181/594 (30%), Positives = 313/594 (52%), Gaps = 36/594 (6%)

Query: 7   CTNLRKLTRLHAHLLV-TGLHYDPP-ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           C +LR L ++HA LLV TG +      ST+LI  Y++   L S+  VF   +EP++  W 
Sbjct: 38  CKDLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWN 97

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSL-GDLGSGEKVHGRIIK 123
           ++++ ++      E++LLY KM         F +P++ RA  SL  D+  G+ VH   +K
Sbjct: 98  LIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMK 157

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            GF  D     +++  Y   GC+   R +FD+M+ RD+VSW+S+I+ Y    +V    ++
Sbjct: 158 LGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFEL 217

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F+ M R  +EP+ VT++ + + C    +    R +H ++++  + I G + NS + MYS 
Sbjct: 218 FNKM-RLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSI 276

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLIT 302
            G     E  FV+I +R   SW  +I  Y   G  ++ +  F +M  EV      +TL  
Sbjct: 277 TGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTL-- 334

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           V+   A +G L EG+ +H   I+ G+    D L  +L++FYA+CG++    ++   I  R
Sbjct: 335 VISVFAKIGNLVEGEKLHSFSIKVGLCD--DVLLASLLDFYAKCGELRNSVQLFGEIPCR 392

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +  +W +++S   + G   EA+ L  QMQ  G+   +  + S + AC ++GSLQL  +IH
Sbjct: 393 SSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIH 452

Query: 423 GHVIK-----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           G++ +     ++  +  + +S+++MY +CG  + A   F R+  K  + W SMI G+  +
Sbjct: 453 GYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIH 512

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-------KWVHHKLISYGV 530
           G ++EA+ LF+QM +  +  + VTFL+ + ACS+ G + +G       KWV      +G+
Sbjct: 513 GMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWV------FGM 566

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-----WSAMIDCYGMHG 579
             D+   T + D+  +CG ++ A     +M  R VV      W A++    +HG
Sbjct: 567 EPDLDHYTCMVDLLGRCGKIKEAL----AMIIRMVVVADSRIWGALVASCRVHG 616


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 207/648 (31%), Positives = 342/648 (52%), Gaps = 5/648 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +P +++      D   G+ VH  ++K G   D     ++L  Y +F  LD A+KVFD+M 
Sbjct: 70  WPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMR 129

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +R+ ++W+S+I  Y ++ D      +   M + G   +  T   + +AC           
Sbjct: 130 TRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQ 189

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  V++     +  +G S I MY+K G    AE+ F  +  +       MI  Y R+G 
Sbjct: 190 IHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGN 249

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             KA+E F  +L    EP   T   ++ +C G   + EGK +     + G   E   +G 
Sbjct: 250 GGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETS-VGN 308

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT-WGLM 396
           A+I  Y   G   E E++  ++ E+N++SW  LIS Y+R G  K+A++  + +    G+ 
Sbjct: 309 AIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGIN 368

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLL 455
            DS  + + L  C +  +L+LGLQIHG V+K+ C  D  V ++L+D+Y+KC     A ++
Sbjct: 369 FDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIV 428

Query: 456 FERIQQKSVVMWNSMICGFYQN-GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           F+ +  K +  +N+++ GF ++ G+  + + LF+Q+ L  ++ D VTF   +   +N   
Sbjct: 429 FDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQAS 488

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           LEKG+  H   +  G   +I +  ++  MYAKCG ++ A ++F+ M+ R+ +SW+A+I  
Sbjct: 489 LEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISA 548

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEP 633
           Y +HGQ   +  LF++M   G  P+E T + IL AC++SG  ++G   FN M   +G++P
Sbjct: 549 YALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKP 608

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            L+HYACM DLL R+G +  A  +I   PFP +  +W  L+N C++H  ++  K   K L
Sbjct: 609 LLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHL 668

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 + G Y L+SN+YA E   DE  KVR +M     +K  G S I
Sbjct: 669 LDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWI 716



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 286/585 (48%), Gaps = 10/585 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H++L+  G   D      ++  Y +   L  ++ VFD  +  ++  W  LIK Y+ +N 
Sbjct: 89  VHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDND 148

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F+ +  +   M +     +      +L+ACSS  D   GE++H  +IK GFD++  + TS
Sbjct: 149 FQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTS 208

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G  D A KVFD M  +D+   + +I  Y    +  + +++F +++ +G EP 
Sbjct: 209 LIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPT 268

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  ++   C     +   + + G   +     +  +GN+ I MY   G    AER F 
Sbjct: 269 DYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFS 328

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKM---LEVKEEPNLITLITVLGSCAGLGW 312
            + ++   SWTA+IS Y+RSG+ +KA+++F+ +   L +  +  L+T   +L  C+    
Sbjct: 329 SMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLT--AILDCCSDCNN 386

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G  +H  +++ G   + + +  AL++ YA+C K+     V   +  + I S+N +++
Sbjct: 387 LELGLQIHGFVMKLGCACDVN-VATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILA 445

Query: 373 EYAR-KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
            +    G  ++ + L  Q++  G+ PD  + +  LS   N  SL+ G   H + +K    
Sbjct: 446 GFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFD 505

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
               V +S+I MY+KCG    A+ +F  +  +  + WN++I  +  +G + +++ LF +M
Sbjct: 506 TNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEM 565

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGD 549
                + DE T L  +QAC+  G  + G  + + +   YG++  +     + D+  + G 
Sbjct: 566 KRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGY 625

Query: 550 LQTAQRVFD-SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           L  A  +   S   ++ + W  +++   +HG LN      K +LD
Sbjct: 626 LSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLD 670



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 227/474 (47%), Gaps = 12/474 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ +G   +    T LI  Y + G    +  VFD+    D      +I  Y    
Sbjct: 189 QIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAG 248

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG--SGEKVHGRIIKCGFDKDDVI 132
              ++I ++  ++ +    +++ + +++  C+  GDLG   G+++ G   K GF  +  +
Sbjct: 249 NGGKAIEVFKNLLNDGFEPTDYTFTNIISTCN--GDLGVEEGKQLQGLAFKYGFLSETSV 306

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-G 191
             +I+  YG  G   +A ++F  M+ ++++SW+++I+ Y  +    + +  F  +  E G
Sbjct: 307 GNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELG 366

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +  D   + ++ + C +  +L     IHG V++     D  +  + + +Y+KC  L SA 
Sbjct: 367 INFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSAR 426

Query: 252 RTFVKIEKRCTTSWTAMISCY-NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
             F  +  +   S+ A+++ +   SG  +  +  F ++     +P+++T   +L   A  
Sbjct: 427 IVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQ 486

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L +G+S H   ++ G       +  ++I  YA+CG + +  ++ + +  R+ +SWN L
Sbjct: 487 ASLEKGRSFHAYTVKTGFDTNIS-VANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNAL 545

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           IS YA  G ++++L L  +M+  G  PD F++ + L AC   G  + G+ +   +     
Sbjct: 546 ISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYG 605

Query: 431 KDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSM--ICGFYQNGN 479
               ++  + + D+  + G+ + A  + +R    KS ++W ++  +C  + N N
Sbjct: 606 IKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLN 659



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 104/201 (51%), Gaps = 1/201 (0%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           C NL    ++H  ++  G   D   +T L++ YA+   L+S+R+VFD         +  +
Sbjct: 384 CNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAI 443

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +  ++ ++  EE  ++    +R      + + +  +L   ++   L  G   H   +K G
Sbjct: 444 LAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTG 503

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           FD +  +  S++  Y + G ++DA ++F+ M  RD +SW+++I++Y  +    + L +F 
Sbjct: 504 FDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFE 563

Query: 186 SMVREGVEPDFVTMLSLAEAC 206
            M R+G +PD  T+L++ +AC
Sbjct: 564 EMKRKGFDPDEFTILAILQAC 584



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L  +  +L K    HA+ + TG   +   +  +I  YA+ GS+  +  +F+     DS
Sbjct: 480 LSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDS 539

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W  LI  Y  +   ++S+ L+ +M R+      F   ++L+AC+  G
Sbjct: 540 ISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSG 588


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 212/728 (29%), Positives = 358/728 (49%), Gaps = 5/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA     GL  +    T L+  Y   G + +++ +F    + +   W  ++     N  
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE+++ Y +M +E    +     +V+  C +L D  +G +V   ++  G      +  S
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  +G    + DA ++FD+M  RD +SW+++I+ Y      S+   +   M    V+PD
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ SL   C     +     IH   +   +    PL N+ + MYS  G L  AE  F 
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLR 314
            + +R   SW  MIS Y +S    +ALE+  ++L+  E  PN +T  + LG+C+    L 
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALM 365

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+++H  I+++ +      +G +L+  Y++C  M + E+V  ++   +++S N+L   Y
Sbjct: 366 NGRTIHAMILQRSL-QNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGY 424

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-LGLQIHGHVIKIDC-KD 432
           A       A+ +   M+  G+ P+  ++ +    C ++G L   G+ +H +V +     D
Sbjct: 425 AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSD 484

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           E++ +SLI MY+ CG    +  +F RI  KSV+ WN++I    ++G   EAI LF     
Sbjct: 485 EYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH 544

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
              ++D       + + +N+  LE+G  +H   +  G+  D ++  A  DMY KCG +  
Sbjct: 545 AGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC 604

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
             +     + R    W+ +I  Y  +G   +A   FK M+  G KP+ VTF+ +L ACSH
Sbjct: 605 MLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSH 664

Query: 613 SGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G +++G  Y+N+M   FGV P ++H  C+VDLL R G    A K I  MP   N  IW 
Sbjct: 665 AGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWR 724

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL+  R HK +D+ +   K L      D+  Y LLSN+YA    W +  K+RS M+   
Sbjct: 725 SLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIK 784

Query: 732 LKKVPGYS 739
           L K P  S
Sbjct: 785 LNKRPACS 792



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 290/610 (47%), Gaps = 13/610 (2%)

Query: 76  FEESILLYHKMIREQ-ATISNFIYPSVLRACSSLG---DLGSGEKVHGRIIKCGFDKDDV 131
            E +     +++RE+   +S F   S++ AC   G       G  +H    + G   +  
Sbjct: 21  LESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVY 80

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           I T++L  YG  G + +A+++F +M  R+VVSW++I+ +   N  + E L  +  M +EG
Sbjct: 81  IGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG 140

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V  +   + ++   CG L        +  HV+   +     + NS I M+     +  AE
Sbjct: 141 VMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAE 200

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R F ++E+R   SW AMIS Y+    + K       M   + +P++ TL +++  CA   
Sbjct: 201 RLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSD 260

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +  G  +H   +  G+      +  AL+  Y+  GK+ E E +   +  R+++SWN +I
Sbjct: 261 LVALGSGIHSLCVSSGLHCSVPLIN-ALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMI 319

Query: 372 SEYARKGMSKEALELLVQ-MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           S Y +     EALE L Q +QT    P+S + +S+L AC +  +L  G  IH  +++   
Sbjct: 320 SSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSL 379

Query: 431 KDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           ++   + +SL+ MYSKC        +FE +    VV  N +  G+    +   A+ +F  
Sbjct: 380 QNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSW 439

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           M    ++ + +T +     C ++G L   G  +H  +   G+  D YI  +L  MYA CG
Sbjct: 440 MRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCG 499

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           DL+++  +F  ++ ++V+SW+A+I     HG+  +A  LF     +G K +       L 
Sbjct: 500 DLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLS 559

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           + ++  S+EEG          G++ D       +D+  + G ++    M+ ++P PA+  
Sbjct: 560 SSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC---MLKTLPDPAHRP 616

Query: 669 I--WGALLNG 676
              W  L++G
Sbjct: 617 TQCWNTLISG 626


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 191/504 (37%), Positives = 292/504 (57%), Gaps = 4/504 (0%)

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y + G L  A + F  I      SW  +++ ++++  F   L+ F +ML+  +  +   L
Sbjct: 57  YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  + +C GL   +  K  H   I+  +  +  Y+ PAL+  Y E G + E  KV   + 
Sbjct: 117 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGD-PYVAPALMNVYTELGSLEEAHKVFEEVP 175

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +N + W ++I  +          EL  +M+  G   D F V   + ACGNV + + G  
Sbjct: 176 LKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKT 235

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            HG  IK +  D   F+Q+SL+DMY KCGF + A  LFE I  + VV+W+++I GF +NG
Sbjct: 236 FHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNG 295

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            +LE+I++F QM  + +  + VTF + + ACS++G L++G+ VH  +I  GV  D+   T
Sbjct: 296 RALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYT 355

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           +  DMYAKCG + TA RVF  + E+NV SWS MI+ +GMHG   +A +LF +M      P
Sbjct: 356 SFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLP 415

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N VTF+++L ACSHSG +EEG  +F +M R +G+ P  +HYACMVDLL R+G I+ A   
Sbjct: 416 NSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSF 475

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I++MP     S WGALL  CRIH+R ++ + + K+L    ++ +G Y +LSNIYA+ G W
Sbjct: 476 INNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMW 535

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           +   K R  M   G+ K+ G+++I
Sbjct: 536 EMVKKTRLKMCEKGIHKIVGFTSI 559



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 215/420 (51%), Gaps = 4/420 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + LFR    L    +L+A +LV  LH        +  +Y ++GSL  +   F+     + 
Sbjct: 19  LSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENL 78

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  +  N  F + + L+ +M++E   + +F     ++AC  L      +  H  
Sbjct: 79  HSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSL 138

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            IK   + D  +  +++  Y E G L++A KVF+++  ++ V W  +I  + + ++    
Sbjct: 139 AIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGV 198

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIV 239
            ++F  M R G E D   +  L +ACG + + +  ++ HG  +++  I  +  L  S + 
Sbjct: 199 FELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVD 258

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG L  A + F +I  R    W+A+I+ + R+G   +++  F +ML     PN +T
Sbjct: 259 MYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVT 318

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG-PALIEFYAECGKMSECEKVIHA 358
             +++ +C+ LG L++G+SVH  +IR G+  E D     + I+ YA+CG +    +V   
Sbjct: 319 FASIVLACSSLGSLKQGRSVHGYMIRNGV--ELDVKNYTSFIDMYAKCGCIVTAYRVFCQ 376

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I E+N+ SW+ +I+ +   G+  EAL L  +M++   +P+S +  S LSAC + G ++ G
Sbjct: 377 IPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 436



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 206/385 (53%), Gaps = 11/385 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H+  +   L  DP  +  L+  Y E+GSL  +  VF+     +S +W V+IK ++  NF
Sbjct: 135 FHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHL--NF 192

Query: 76  FEE--SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVI 132
            EE     L+ +M R    +  F+   +++AC ++     G+  HG  IK  F D +  +
Sbjct: 193 SEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFL 252

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           QTS++  Y + G LD A K+F++++ RDVV WS+IIA +  N    E + MF  M+ + V
Sbjct: 253 QTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSV 312

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+ VT  S+  AC  L SL+  RS+HG+++R  +++D     SFI MY+KCG +++A R
Sbjct: 313 TPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYR 372

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F +I ++   SW+ MI+ +   G   +AL  F +M  V + PN +T ++VL +C+  G 
Sbjct: 373 VFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGR 432

Query: 313 LREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNILSWNML 370
           + EG S    + R  G+ P  ++    +++     GK+ E    I+ +  E    +W  L
Sbjct: 433 IEEGWSHFKSMSRDYGITPVEEHYA-CMVDLLGRAGKIDEALSFINNMPTEPGASAWGAL 491

Query: 371 ISE---YARKGMSKEALELLVQMQT 392
           +     + R  +++E  + L+ +++
Sbjct: 492 LGACRIHRRAELAEEVAKKLLPLES 516



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 183/348 (52%), Gaps = 3/348 (0%)

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
            GP +   Y + G +    K  + I   N+ SWN +++ +++     + L+L  +M   G
Sbjct: 49  FGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEG 108

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
            + DSF++  ++ AC  +   Q     H   IK+  + D +V  +L+++Y++ G    A+
Sbjct: 109 KLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAH 168

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +FE +  K+ V+W  MI G            LF +M  +  E+D       IQAC N+ 
Sbjct: 169 KVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVY 228

Query: 514 QLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             ++GK  H   I    +  + ++ T+L DMY KCG L  A ++F+ +S R+VV WSA+I
Sbjct: 229 AGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAII 288

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             +  +G+  ++ S+F+QML   + PN VTF +I+ ACS  GS+++G+     M   GVE
Sbjct: 289 AGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVE 348

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            D+++Y   +D+ ++ G I  A+++   +P   N   W  ++NG  +H
Sbjct: 349 LDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMH 395


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 199/550 (36%), Positives = 311/550 (56%), Gaps = 16/550 (2%)

Query: 202 LAEACGELCSLRPARSIHGHV-LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           L +ACG+   +   R +H  V    +   D  L    I MYS CG    +   F K+ ++
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSV 319
               W A++S Y R+  F+ A+  F +++ V E +P+  TL  V+ +CAGL  L  G+ +
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 320 HCQIIRKGMGPEYD-----YLGPALIEFYAECGKMSEC-EKVIHAIGERNILSWNMLISE 373
           H      GM  + D     ++G ALI  Y +CG + E  ++V   +  + + SWN L+  
Sbjct: 231 H------GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           YA+    ++AL+L +QM   GL PD F++ S L AC  + SL  G +IHG  ++     D
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            F+  SL+ +Y  CG    A +LF+ ++ +S+V WN MI G+ QNG   EAINLF QM  
Sbjct: 345 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 404

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           + ++  E+  +    ACS +  L  GK +H   +   + +DI++ +++ DMYAK G +  
Sbjct: 405 DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGL 464

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           +QR+FD + E++V SW+ +I  YG+HG+  +A  LF++ML  G+KP++ TF  IL ACSH
Sbjct: 465 SQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 524

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G VE+G  YFN M  +  +EP L+HY C+VD+L R+G I+ A ++I  MP   +  IW 
Sbjct: 525 AGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWS 584

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL+ CRIH  + + + +  +L          Y L+SN++A  G WD+  +VR  M+  G
Sbjct: 585 SLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIG 644

Query: 732 LKKVPGYSTI 741
           L+K  G S I
Sbjct: 645 LQKDAGCSWI 654



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 246/453 (54%), Gaps = 6/453 (1%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR-EQ 90
           +TR+I  Y+  GS   SR+VFD  +  + F W  ++  Y  N  FE+++ ++ ++I   +
Sbjct: 144 NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTE 203

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA- 149
               NF  P V++AC+ L DLG G+ +HG   K     D  +  +++  YG+ G +++A 
Sbjct: 204 HKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAV 263

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           ++VFD M ++ V SW++++  Y  N+D  + L ++  M   G++PD+ T+ SL  AC  +
Sbjct: 264 KRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 323

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
            SL     IHG  LR  + +D  +G S + +Y  CG   +A+  F  +E R   SW  MI
Sbjct: 324 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 383

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y+++G   +A+  F +ML    +P  I ++ V G+C+ L  LR GK +HC  ++  + 
Sbjct: 384 AGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 443

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  ++  ++I+ YA+ G +   +++   + E+++ SWN++I+ Y   G  KEALEL  +
Sbjct: 444 EDI-FVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEK 502

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCG 447
           M   GL PD F+    L AC + G ++ GL+    ++ +   +  ++  + ++DM  + G
Sbjct: 503 MLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAG 562

Query: 448 FKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGN 479
             + A  L E +       +W+S++     +GN
Sbjct: 563 RIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 595



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 286/541 (52%), Gaps = 10/541 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRI-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           +L+AC    D+  G ++H  +     F  D V+ T I+  Y   G   D+R VFDK+  +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSI 218
           ++  W++I+++Y  N    + + +F  ++     +PD  T+  + +AC  L  L   + I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA-ERTFVKIEKRCTTSWTAMISCYNRSGW 277
           HG   +  +  D  +GN+ I MY KCG +  A +R F  ++ +  +SW A++  Y ++  
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +KAL+ +++M +   +P+  T+ ++L +C+ +  L  G+ +H   +R G+  +  ++G 
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD-PFIGI 349

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           +L+  Y  CGK    + +   +  R+++SWN++I+ Y++ G+  EA+ L  QM + G+ P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
              ++     AC  + +L+LG ++H   +K    +D FV SS+IDMY+K G   L+  +F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           +R+++K V  WN +I G+  +G   EA+ LF +M    L+ D+ TF   + ACS+ G +E
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 529

Query: 517 KG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDC 574
            G ++ +  L  + +   +   T + DM  + G +  A R+ + M  + +   WS+++  
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589

Query: 575 YGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
             +HG L     +  ++L+    KP     ++ L+A   SG  ++ +     M+  G++ 
Sbjct: 590 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA--GSGKWDDVRRVRGRMKDIGLQK 647

Query: 634 D 634
           D
Sbjct: 648 D 648



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 189/380 (49%), Gaps = 9/380 (2%)

Query: 35  LIESYAEMGSLRSS-RLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           LI  Y + G +  + + VFD         W  L+  Y  N+   +++ LY +M       
Sbjct: 249 LIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDP 308

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
             F   S+L ACS +  L  GE++HG  ++ G   D  I  S+L  Y   G    A+ +F
Sbjct: 309 DWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLF 368

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D M  R +VSW+ +IA Y  N    E + +F  M+ +G++P  + ++ +  AC +L +LR
Sbjct: 369 DGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR 428

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + +H   L+  +  D  + +S I MY+K G +  ++R F ++ ++   SW  +I+ Y 
Sbjct: 429 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG 488

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEY 332
             G  ++ALE F KML +  +P+  T   +L +C+  G + +G     Q++    + P+ 
Sbjct: 489 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 548

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAI-GERNILSWNMLISE---YARKGMSKEALELLV 388
           ++    +++     G++ +  ++I  + G+ +   W+ L+S    +   G+ ++    L+
Sbjct: 549 EHY-TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLL 607

Query: 389 QMQTWGLMPDSFSVASSLSA 408
           +++     P+++ + S+L A
Sbjct: 608 ELEPE--KPENYVLISNLFA 625



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ ++ L     +H   L  GL  DP     L+  Y   G   +++++FD  +   
Sbjct: 316 LLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRS 375

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W V+I  Y  N   +E+I L+ +M+ +           V  ACS L  L  G+++H 
Sbjct: 376 LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHC 435

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K    +D  + +SI+  Y + GC+  ++++FD++  +DV SW+ IIA Y  +    E
Sbjct: 436 FALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKE 495

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            L++F  M+R G++PD  T   +  AC
Sbjct: 496 ALELFEKMLRLGLKPDDFTFTGILMAC 522



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 122/263 (46%), Gaps = 16/263 (6%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C+ L  L     LH   L   L  D   S+ +I+ YA+ G +  S+ +FD  +E D   
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W V+I  Y  +   +E++ L+ KM+R      +F +  +L ACS  G +  G +   +++
Sbjct: 480 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 539

Query: 123 KCGFDKDDVIQ-TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEG 180
                +  +   T ++   G  G +DDA ++ ++M    D   WSS+++S   + ++  G
Sbjct: 540 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 599

Query: 181 LKMFHSMVREGVEPD----FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            K+ + ++   +EP+    +V + +L    G+   +R  R        + I +    G S
Sbjct: 600 EKVANKLLE--LEPEKPENYVLISNLFAGSGKWDDVRRVRG-----RMKDIGLQKDAGCS 652

Query: 237 FIVMYSKCGDLLSAERTFVKIEK 259
           +I +  K  + L  +    ++E+
Sbjct: 653 WIEVGGKVHNFLIGDEMLPELEE 675


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 203/632 (32%), Positives = 345/632 (54%), Gaps = 6/632 (0%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           +++H  I+  G      + + +  TY +      A  +FDK++   + SW++++  Y   
Sbjct: 31  KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90

Query: 175 ADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
               + L +F  M+  G   PD  T   + +ACG+L  +     IHG   +     D  +
Sbjct: 91  GRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFV 150

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N+ + MY   G+  +A+  F  +++R   SW  MI+ Y R+   + A+  + +M++V  
Sbjct: 151 QNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGV 210

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           EP+  T+++VL +C  L  +  G+ VH  +  KG       +  AL++ Y +CG+M E  
Sbjct: 211 EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNI-VVRNALVDMYVKCGQMKEAW 269

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +   + ++++++W  LI+ Y   G ++ AL L   MQ  G+ P+S S+AS LSACG++ 
Sbjct: 270 LLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLV 329

Query: 414 SLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L  G  +H   I+   + E  V+++LI+MY+KC   NL+Y +F    +K    WN+++ 
Sbjct: 330 YLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLS 389

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           GF QN  + EAI LF QM +  ++ D  TF + + A + +  L++   +H  LI  G   
Sbjct: 390 GFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLY 449

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFD--SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            + + + L D+Y+KCG L  A ++F+  S+ +++++ WSA+I  YG HG    A  LF Q
Sbjct: 450 RLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQ 509

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M+ SG+KPN VTF ++L ACSH+G V EG   FN M +   +   + HY CM+DLL R+G
Sbjct: 510 MVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAG 569

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            +  A+ +I +MP   N ++WGALL  C IH+ +++ +   +        + G Y LL+ 
Sbjct: 570 RLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAK 629

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +YA  G W +  +VR ++   GL+K+P +S I
Sbjct: 630 LYAAVGRWGDAERVRDMVNEVGLRKLPAHSLI 661



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 186/677 (27%), Positives = 330/677 (48%), Gaps = 47/677 (6%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +  +  +  RLHA +L  G+       ++L  +YA+      +  +FD   +P  F W
Sbjct: 21  FSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSW 80

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRII 122
             +++ Y+      +++ L+ +M+    T+ + F YP V++AC  L  +  G  +HG+  
Sbjct: 81  NAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTF 140

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G+D D  +Q ++L  Y   G  + A+ VFD M  R V+SW+++I  YF N    + + 
Sbjct: 141 KFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVN 200

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           ++  M+  GVEPD  T++S+  ACG L ++   R +H  V  +    +  + N+ + MY 
Sbjct: 201 VYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYV 260

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG +  A      ++ +   +WT +I+ Y  +G  + AL     M     +PN +++ +
Sbjct: 261 KCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIAS 320

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +C  L +L  GK +H   IR+ +  E   +  ALI  YA+C   +   KV     ++
Sbjct: 321 LLSACGSLVYLNHGKCLHAWAIRQKIESEV-IVETALINMYAKCNCGNLSYKVFMGTSKK 379

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
               WN L+S + +  +++EA+EL  QM    + PD  +  S L A   +  LQ  + IH
Sbjct: 380 RTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIH 439

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGN 479
            ++I+        V S L+D+YSKCG    A+ +F  I  + K +++W+++I  + ++G+
Sbjct: 440 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGH 499

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
              A+ LF+QM  + ++ + VTF + + ACS+ G + +G      L ++ +++   I   
Sbjct: 500 GKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEG----FSLFNFMLKQHQIIS-- 553

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
                                   +V  ++ MID  G  G+LNDA +L + M    I PN
Sbjct: 554 ------------------------HVDHYTCMIDLLGRAGRLNDAYNLIRTM---PITPN 586

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDL---LSRSGDIEGAF 655
              +  +L AC    +VE G+    A   F +EP +  +Y  +  L   + R GD E   
Sbjct: 587 HAVWGALLGACVIHENVELGE--VAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVR 644

Query: 656 KMIHSM---PFPANGSI 669
            M++ +     PA+  I
Sbjct: 645 DMVNEVGLRKLPAHSLI 661


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 214/682 (31%), Positives = 372/682 (54%), Gaps = 11/682 (1%)

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           IK   ++  ++E++ LYH++    A +S+ ++ PS+L+ACS+      G  +HG +IK G
Sbjct: 19  IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNLGTAMHGCLIKQG 77

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
                 I  S +  Y ++G LD A++ FD   ++D VSW+ ++   F N  +  GL  F 
Sbjct: 78  CQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFI 137

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
                  +P+  ++L + +A  EL       + HG++ R        + NS + +Y++  
Sbjct: 138 KGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV- 196

Query: 246 DLLSAERTFVKIEKRC-TTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITV 303
            +  A + F ++  R    SW+ MI  + + G  ++    F  M+ E    P+ +T+++V
Sbjct: 197 HMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSV 256

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +C  L  +  G  VH  +I +G+  +  ++G +LI+ Y++C  +    K    I E+N
Sbjct: 257 LKACTNLKDISLGTMVHGLVIFRGLEDDL-FVGNSLIDMYSKCFNVHSAFKAFKEIPEKN 315

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           I+SWN+++S Y       EAL LL  M   G   D  ++A+ L    +         +HG
Sbjct: 316 IISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHG 375

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            +I+   + +E + +S+ID Y+KC    LA ++F+ + +K VV W++MI GF +NG   E
Sbjct: 376 VIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDE 435

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           AI++F QM    +  + V+ +  ++AC+   +L + KW H   +  G+  ++ I T++ D
Sbjct: 436 AISVFKQMNEEVIP-NNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIID 494

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCGD++ + R F+ + ++NVV WSAMI  + ++G  ++A  LF+++  +G KPN VT
Sbjct: 495 MYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVT 554

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            +++L ACSH G +EEG  +F +M +  G+EP L+HY+C+VD+LSR+G    A ++I  +
Sbjct: 555 ALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKL 614

Query: 662 P--FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
           P    A  SIWG LL+ CR +  I +       +       +  Y L SN+YA  G   +
Sbjct: 615 PKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMID 674

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             K+R + +  G+K V GYS +
Sbjct: 675 SAKMRRLAKEKGVKVVAGYSLV 696



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 287/573 (50%), Gaps = 21/573 (3%)

Query: 3   LFRSCTN--LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + ++C+N      T +H  L+  G       +   I+ Y + G L S++  FD+ K  DS
Sbjct: 54  ILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDS 113

Query: 61  FMWAVLIKCYMWNNFFEESIL------LYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V++      NF   SI+      +  +    Q  IS+ +   V++A   L     G
Sbjct: 114 VSWNVMVH----GNFSNGSIMAGLCWFIKGRFAHFQPNISSLLL--VIQAFRELKIYSQG 167

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFD 173
              HG I + GF     +Q S+L  Y E   +  A K+F +M+ R DVVSWS +I  +  
Sbjct: 168 FAFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAHKLFGEMSVRNDVVSWSVMIGGFVQ 226

Query: 174 NADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
             +  +G  MF +MV E G+ PD VT++S+ +AC  L  +     +HG V+ R ++ D  
Sbjct: 227 IGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLF 286

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +GNS I MYSKC ++ SA + F +I ++   SW  M+S Y  +    +AL     M+   
Sbjct: 287 VGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREG 346

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            E + +TL  VL          + +SVH  IIRKG     + L  ++I+ YA+C  +   
Sbjct: 347 AEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGY-ESNELLLNSVIDAYAKCNLVELA 405

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             V   + ++++++W+ +I+ +AR G   EA+ +  QM    ++P++ S+ + + AC   
Sbjct: 406 RMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVS 464

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             L+     HG  ++     E  + +S+IDMYSKCG    +   F +I QK+VV W++MI
Sbjct: 465 AELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMI 524

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGV 530
             F  NG + EA+ LF ++  N  + + VT L+ + ACS+ G +E+G      ++  +G+
Sbjct: 525 SAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGI 584

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
              +   + + DM ++ G    A  + + + + 
Sbjct: 585 EPGLEHYSCIVDMLSRAGKFNEALELIEKLPKE 617



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 217/421 (51%), Gaps = 15/421 (3%)

Query: 1   MPLFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++CTNL+ +   T +H  ++  GL  D      LI+ Y++  ++ S+   F    E
Sbjct: 254 VSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPE 313

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W +++  Y+ N    E++ L   M+RE A        +VL+      D      V
Sbjct: 314 KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSV 373

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG II+ G++ ++++  S++  Y +   ++ AR VFD M  +DVV+WS++IA +  N   
Sbjct: 374 HGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKP 433

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E + +F  M  E V P+ V++++L EAC     LR ++  HG  +RR +  +  +G S 
Sbjct: 434 DEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSI 492

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKCGD+ ++ R F +I ++    W+AMIS +  +G   +AL  F K+ +   +PN 
Sbjct: 493 IDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNA 552

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +T +++L +C+  G + EG S    +++K G+ P  ++    +++  +  GK +E  ++I
Sbjct: 553 VTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHY-SCIVDMLSRAGKFNEALELI 611

Query: 357 HAIG---ERNILSWNMLIS---EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA-C 409
             +    E     W  L+S    Y    +   A   ++Q++   L    + +AS+L A C
Sbjct: 612 EKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEP--LSSAGYMLASNLYANC 669

Query: 410 G 410
           G
Sbjct: 670 G 670


>gi|302768433|ref|XP_002967636.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
 gi|300164374|gb|EFJ30983.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
          Length = 747

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 204/718 (28%), Positives = 368/718 (51%), Gaps = 7/718 (0%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            ++CT + +   +H+ ++  GL         ++E Y  +GS+  ++  F+   E +   W
Sbjct: 22  LKNCTEVSEGKHIHSQIVSAGLDRSTYVGNHVLEMYGRLGSVEEAQEAFEKVFEKNHISW 81

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
            + I     N   +E++  + KM  E        +  V+ AC    D   G KVH R+++
Sbjct: 82  TLFIAALAQNGHCKEALATFKKMDLEGVKPKRLAFLRVIGACCDARDATEGRKVHARVLE 141

Query: 124 CGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
                 DV +  +++  YG+ GCLD A  VF  + S+D  SW+S+I +Y ++ +    L+
Sbjct: 142 DAVLASDVFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEHEEFDLALE 201

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGEL--CSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++   + EG +PD  T  ++  AC  L   SL   R +H  +L   +  +  L N  + +
Sbjct: 202 IYMEFLVEGGKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLALVNRLVYL 261

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y   G    A     ++       W AM++  ++ G  ++ALE F +      +P+ +T 
Sbjct: 262 YGSSGCFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSLEGVKPSGVTF 321

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++ + +C+  G  ++G+++H + +  G G +    G  LI  Y +CG + +  +++ A G
Sbjct: 322 VSGIDACSDGGDEQQGRAIHARALEAGFGSDEVVTG-CLINMYGKCGNLEQARRMLEASG 380

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             N++S   LI  Y + G+ + AL++  +++  G+  +  ++ S ++A  +   L  G  
Sbjct: 381 WNNLVSCTSLIWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVVAAFWSSDFLDRGRA 440

Query: 421 IHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H  +I++    D  V ++LI MY KCG    A ++F   ++K+ V WNS+I    Q G+
Sbjct: 441 MHARLIELGHSSDVIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWNSIIGACSQQGD 500

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
              A++LF +M L+      +T    ++AC  I  L +GK +H ++    +  D  + ++
Sbjct: 501 GKSALDLFARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSMLEHDPNVRSS 560

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L +MY KCG L  A+++F       VV+W++MI  Y  H +  D+  L ++M   G+K N
Sbjct: 561 LLNMYTKCGSLVDAEKIFQRWQSSCVVTWTSMIAAYAKHARFEDSLKLGRRMEMEGVKFN 620

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           EVTF+ +++ACSH+G VE+G  YF +M R  G+ P L+ Y+C+VDLL+R+G IE A   I
Sbjct: 621 EVTFLTVIFACSHAGFVEQGCHYFVSMTRERGMTPSLEQYSCVVDLLARAGWIEQALDFI 680

Query: 659 -HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
              M  P N + W ALLN C+IH  +     + + +      ++   +LL ++  E G
Sbjct: 681 ERRMHLPPNAATWIALLNACKIHHDLQRAVMVAERIIELSPGNSSACSLLQDVCNEAG 738



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 169/623 (27%), Positives = 296/623 (47%), Gaps = 10/623 (1%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           S+  + S L+ C+ + +   G+ +H +I+  G D+   +   +L  YG  G +++A++ F
Sbjct: 14  SSSAFASALKNCTEVSE---GKHIHSQIVSAGLDRSTYVGNHVLEMYGRLGSVEEAQEAF 70

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           +K+  ++ +SW+  IA+   N    E L  F  M  EGV+P  +  L +  AC +     
Sbjct: 71  EKVFEKNHISWTLFIAALAQNGHCKEALATFKKMDLEGVKPKRLAFLRVIGACCDARDAT 130

Query: 214 PARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
             R +H  VL   +   D  L  + I MY KCG L  AE  F  I  +   SWT+MI  Y
Sbjct: 131 EGRKVHARVLEDAVLASDVFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAY 190

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL--GWLREGKSVHCQIIRKGMGP 330
                F  ALE +++ L    +P+  T   +L +C  L    L +G+ VH QI+  G+G 
Sbjct: 191 VEHEEFDLALEIYMEFLVEGGKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGS 250

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               +   L+  Y   G   E   ++  +     + WN +++  +++G +++ALEL  + 
Sbjct: 251 NLALVNR-LVYLYGSSGCFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRT 309

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
              G+ P   +  S + AC + G  Q G  IH   ++     DE V   LI+MY KCG  
Sbjct: 310 SLEGVKPSGVTFVSGIDACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNL 369

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A  + E     ++V   S+I  + Q+G    A+++FH++    ++ ++VT ++ + A 
Sbjct: 370 EQARRMLEASGWNNLVSCTSLIWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVVAAF 429

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            +   L++G+ +H +LI  G   D+ +  AL  MY KCG L  A+ +F +   +N VSW+
Sbjct: 430 WSSDFLDRGRAMHARLIELGHSSDVIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWN 489

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           ++I      G    A  LF +M  SG  P  +T  N+L AC     +  GK     +R  
Sbjct: 490 SIIGACSQQGDGKSALDLFARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGS 549

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            +E D    + ++++ ++ G +  A K+       +    W +++     H R +    +
Sbjct: 550 MLEHDPNVRSSLLNMYTKCGSLVDAEKIFQRWQ-SSCVVTWTSMIAAYAKHARFEDSLKL 608

Query: 690 EKELSVTGTNDNGYYTLLSNIYA 712
            + + + G   N   T L+ I+A
Sbjct: 609 GRRMEMEGVKFN-EVTFLTVIFA 630


>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19191, mitochondrial; Flags: Precursor
 gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 200/597 (33%), Positives = 321/597 (53%), Gaps = 6/597 (1%)

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           R+++       V +W+  I    +  D  E L +F  M R G EP+  T   +A+AC  L
Sbjct: 6   RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
             +     +H H+++     D  +G + + M+ KC  +  A + F ++ +R  T+W AM+
Sbjct: 66  ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           S + +SG   KA   F +M   +  P+ +T++T++ S +    L+  +++H   IR G+ 
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKGMSKEALELL 387
            +   +    I  Y +CG +   + V  AI  G+R ++SWN +   Y+  G + +A  L 
Sbjct: 186 VQVT-VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKC 446
             M      PD  +  +  ++C N  +L  G  IH H I +   +D    ++ I MYSK 
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
                A LLF+ +  ++ V W  MI G+ + G+  EA+ LFH M  +  + D VT L+ I
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
             C   G LE GKW+  +   YG ++D + I  AL DMY+KCG +  A+ +FD+  E+ V
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTV 424

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           V+W+ MI  Y ++G   +A  LF +M+D   KPN +TF+ +L AC+HSGS+E+G  YF+ 
Sbjct: 425 VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 484

Query: 626 MR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M+ ++ + P L HY+CMVDLL R G +E A ++I +M    +  IWGALLN C+IH+ + 
Sbjct: 485 MKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVK 544

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +   + L          Y  ++NIYA  G WD F ++RSIM+   +KK PG S I
Sbjct: 545 IAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 177/604 (29%), Positives = 291/604 (48%), Gaps = 42/604 (6%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W + I+  +  N   ES+LL+ +M R     +NF +P V +AC+ L D+G  E VH  +I
Sbjct: 20  WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K  F  D  + T+ +  + +   +D A KVF++M  RD  +W+++++ +  +    +   
Sbjct: 80  KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M    + PD VT+++L ++     SL+   ++H   +R  + +   + N++I  Y 
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199

Query: 243 KCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           KCGDL SA+  F  I++  R   SW +M   Y+  G    A   +  ML  + +P+L T 
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           I +  SC     L +G+ +H   I  G   + + +    I  Y++         +   + 
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAIN-TFISMYSKSEDTCSARLLFDIMT 318

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R  +SW ++IS YA KG   EAL L   M   G  PD  ++ S +S CG  GSL+ G  
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378

Query: 421 IHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           I        CK + V   ++LIDMYSKCG  + A  +F+   +K+VV W +MI G+  NG
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
             LEA+ LF +M     + + +TFL  +QAC++ G LEKG W +     + + K +Y  +
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEY-----FHIMKQVYNIS 492

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
              D Y                        S M+D  G  G+L +A  L + M     KP
Sbjct: 493 PGLDHY------------------------SCMVDLLGRKGKLEEALELIRNM---SAKP 525

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH-YACMVDLLSRSGDIEGAFKM 657
           +   +  +L AC    +V+  +    A  +F +EP +   Y  M ++ + +G  +G F  
Sbjct: 526 DAGIWGALLNACKIHRNVKIAE--QAAESLFNLEPQMAAPYVEMANIYAAAGMWDG-FAR 582

Query: 658 IHSM 661
           I S+
Sbjct: 583 IRSI 586



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 205/414 (49%), Gaps = 3/414 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HAHL+ +    D    T  ++ + +  S+  +  VF+   E D+  W  ++  +  +  
Sbjct: 74  VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +++  L+ +M   + T  +    +++++ S    L   E +H   I+ G D    +  +
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193

Query: 136 ILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            + TYG+ G LD A+ VF+ +    R VVSW+S+  +Y    +  +   ++  M+RE  +
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD  T ++LA +C    +L   R IH H +      D    N+FI MYSK  D  SA   
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +  R   SWT MIS Y   G   +AL  F  M++  E+P+L+TL++++  C   G L
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             GK +  +    G   +   +  ALI+ Y++CG + E   +     E+ +++W  +I+ 
Sbjct: 374 ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAG 433

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           YA  G+  EAL+L  +M      P+  +  + L AC + GSL+ G + + H++K
Sbjct: 434 YALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMK 486



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           M L +S +   +L+ L  +HA  +  G+      +   I +Y + G L S++LVF+    
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216

Query: 58  PDSFM--WAVLIKCYMWNNFFEESILLYHKMIREQ--ATISNFIYPSVLRACSSLGDLGS 113
            D  +  W  + K Y       ++  LY  M+RE+    +S FI  ++  +C +   L  
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI--NLAASCQNPETLTQ 274

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G  +H   I  G D+D     + +  Y +      AR +FD MTSR  VSW+ +I+ Y +
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             D+ E L +FH+M++ G +PD VT+LSL   CG+  SL   + I         K D  +
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394

Query: 234 -GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
             N+ I MYSKCG +  A   F    ++   +WT MI+ Y  +G F +AL+ F KM+++ 
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454

Query: 293 EEPNLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
            +PN IT + VL +CA  G L +G +  H       + P  D+    +++     GK+ E
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS-CMVDLLGRKGKLEE 513

Query: 352 CEKVIHAIGER 362
             ++I  +  +
Sbjct: 514 ALELIRNMSAK 524


>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 836

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 219/669 (32%), Positives = 350/669 (52%), Gaps = 6/669 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H  +   G   D    T L+E Y + G L S+R VFD     D   W  ++     N 
Sbjct: 121 RIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNG 180

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ L+  M      I +    +++ A S L        +HG +IK GF       +
Sbjct: 181 CSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFT--SAFSS 238

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++  Y +   L  A  VF+++ S+D  SW +++A+Y  N    E L++F  M    V  
Sbjct: 239 GLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRM 298

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + V   S  +A   + +L    +IH + +++ +  D  +  S I MYSKCG+L  AE+ F
Sbjct: 299 NKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLF 358

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
           +KI+ R   SW+AMI+ + ++G   +AL  F  M+    +PN +TL +VL  CAG+   R
Sbjct: 359 IKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASR 418

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GKS+HC  I+  +  E +    A+I  YA+CG  S   K    +  ++ +++N L   Y
Sbjct: 419 LGKSIHCYAIKADVESELE-TATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGY 477

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE- 433
            + G + +A ++   M+  G+ PDS ++   L  C        G  ++G +IK     E 
Sbjct: 478 TQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSEC 537

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            V  +LIDM++KC     A  LF++   +KS V WN M+ G+  +G + EAI  F QM +
Sbjct: 538 HVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKV 597

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
              + + VTF+  ++A + +  L  G  VH  LI +G      +  +L DMYAKCG +++
Sbjct: 598 EKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIES 657

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           +++ F  +  +N+VSW+ M+  Y  HG  N A SLF  M ++ +KP+ V+F+++L AC H
Sbjct: 658 SKKCFIEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRH 717

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G  EEGK  F  M     +E  ++HYACMVDLL +SG  + A +M+  M   A+  +WG
Sbjct: 718 AGLAEEGKRIFKEMEERHKIEAKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWG 777

Query: 672 ALLNGCRIH 680
           ALLN  R+H
Sbjct: 778 ALLNSSRMH 786



 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 187/659 (28%), Positives = 342/659 (51%), Gaps = 10/659 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + + R C N R L ++H  L+V GL        +LI +Y+       SR + D+   P  
Sbjct: 9   LRMLRECKNFRLLLQIHGSLIVAGL----KPHNQLINAYSLFQRPDLSRKIVDSVPYPGV 64

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
            +W  +I+ Y      +E++ ++  M   +    + + +   L+AC+   D   G ++H 
Sbjct: 65  VLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHD 124

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I + GF+ D  I T+++  Y + G L  AR+VFDKM  +D+V+W+++++    N   SE
Sbjct: 125 LIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSE 184

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M    V+ D V++ +L  A  +L      R +HG V+++         +  I 
Sbjct: 185 ALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFT--SAFSSGLID 242

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KC DL +AE  F ++  +  +SW  M++ Y  +G F++ LE F  M       N + 
Sbjct: 243 MYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVA 302

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + L + A +G L +G ++H   +++GM  +   +  +LI  Y++CG++   E++   I
Sbjct: 303 AASALQAAAYVGNLEKGIAIHEYTVQQGMMSDIS-VATSLINMYSKCGELELAEQLFIKI 361

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +R+++SW+ +I+ + + G   EAL L   M      P++ ++ S L  C  V + +LG 
Sbjct: 362 KDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGK 421

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            IH + IK D + E    +++I MY+KCG  +     FER+  K  + +N++  G+ Q G
Sbjct: 422 SIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIG 481

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           ++ +A +++  M L+ +  D  T +  +Q C+      +G  V+ ++I +G   + ++  
Sbjct: 482 DASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAH 541

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           AL DM+ KC  L  A+ +FD    E++ VSW+ M++ Y +HGQ  +A + F+QM     +
Sbjct: 542 ALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQ 601

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PN VTF+NI+ A +   ++  G    +++  FG          +VD+ ++ G IE + K
Sbjct: 602 PNAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKK 660



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 236/482 (48%), Gaps = 13/482 (2%)

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
            T+L +   C    + R    IHG ++   +K    L N++ +      DL  + +    
Sbjct: 6   TTLLRMLRECK---NFRLLLQIHGSLIVAGLKPHNQLINAYSLFQRP--DL--SRKIVDS 58

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLRE 315
           +       W +MI  Y R+G  ++ALE F  M E K  +P+  T    L +CAG     E
Sbjct: 59  VPYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEE 118

Query: 316 GKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           G  +H  I    MG E D Y+G AL+E Y + G +    +V   +  ++I++WN ++S  
Sbjct: 119 GLRIHDLIAE--MGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGL 176

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
           A+ G S EAL L   M +  +  D  S+ + + A   +    +   +HG VIK      F
Sbjct: 177 AQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAF 236

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
             S LIDMY KC     A  +FE +  K    W +M+  +  NG+  E + LF  M    
Sbjct: 237 -SSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYD 295

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           + M++V   +A+QA + +G LEKG  +H   +  G+  DI + T+L +MY+KCG+L+ A+
Sbjct: 296 VRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAE 355

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           ++F  + +R+VVSWSAMI  +   GQ ++A SLF+ M+ +  KPN VT  ++L  C+   
Sbjct: 356 QLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVA 415

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           +   GK          VE +L+    ++ + ++ G      K    +P   +   + AL 
Sbjct: 416 ASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIK-DAIAFNALA 474

Query: 675 NG 676
            G
Sbjct: 475 QG 476



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 234/468 (50%), Gaps = 7/468 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL K   +H + +  G+  D   +T LI  Y++ G L  +  +F   K+ D   W+ +I 
Sbjct: 315 NLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIA 374

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +      +E++ L+  M+R     +     SVL+ C+ +     G+ +H   IK   + 
Sbjct: 375 SFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVES 434

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +    T+++  Y + G      K F+++  +D ++++++   Y    D S+   ++ +M 
Sbjct: 435 ELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMK 494

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             GV PD  TM+ + + C           ++G +++     +  + ++ I M++KC  L 
Sbjct: 495 LHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALA 554

Query: 249 SAERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
           +A+  F K   ++ T SW  M++ Y   G  ++A+ +F +M   K +PN +T + ++ + 
Sbjct: 555 AAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAA 614

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A L  L  G SVH  +I+ G    +  +G +L++ YA+CG +   +K    I  +N++SW
Sbjct: 615 AELAALSLGMSVHSSLIQFGF-CSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSW 673

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-- 425
           N ++S YA  G++  A+ L + MQ   L PDS S  S LSAC + G  + G +I   +  
Sbjct: 674 NTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEEGKRIFKEMEE 733

Query: 426 -IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI 471
             KI+ K E   + ++D+  K G  + A  +  R++ K SV +W +++
Sbjct: 734 RHKIEAKVEHY-ACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWGALL 780


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 206/664 (31%), Positives = 354/664 (53%), Gaps = 23/664 (3%)

Query: 72   WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            W NF EE     + M  ++  ++        +  +SL       ++   +IK G D+   
Sbjct: 429  WMNFLEER---SYSMKSQRPNLAP-------KGSNSLDANTEAIQIQNHLIKRGIDQFVY 478

Query: 132  IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
            + T++L  Y + G +  A   FD M  RDVVSW+++I  Y  N      L++F  M++ G
Sbjct: 479  VSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLG 538

Query: 192  VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
              P   T++ L  +CG+L  +   +SIHG  ++  + +D  + N+   MY+KCGDL +AE
Sbjct: 539  FCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAE 598

Query: 252  RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
              F ++  +   SW  MI  Y ++G+F +A+  F +M+    E + +T++++  + A   
Sbjct: 599  YLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANA--- 655

Query: 312  WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
                 +S+HC  I+ G+  +   +  +LI  YA  G     E +  ++ ++N++S   +I
Sbjct: 656  ---NPESIHCYTIKVGLADDASVV-TSLICMYARYGSTDHAELLYWSLPQKNLVSLTAII 711

Query: 372  SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
            + YA  G     +E   QM    + PDS ++ S L    +   + +G   HG+ IK    
Sbjct: 712  TSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLD 771

Query: 432  D-EFVQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
                V + LI MYSK  F N+  L  LF  + +K ++ WNS+I G  Q G +  AI LF 
Sbjct: 772  TFNLVTNGLISMYSK--FNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFC 829

Query: 489  QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            QM ++    D +T  + +  CS +G L+ G+ +H  ++   +  + ++ TAL  MY KCG
Sbjct: 830  QMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCG 889

Query: 549  DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
             +  A+RVF S+ +  + +W+AMI  Y  +G  + A + + +M + G++P+++TF+ +L 
Sbjct: 890  SIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLA 949

Query: 609  ACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC+H G + EG+ YF  M +++ + P LQH ACMV LL+R G  E A   I +M    + 
Sbjct: 950  ACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDS 1009

Query: 668  SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            ++WGA L+ C IH+ + + + + K+L +    + G Y L+SN+YA  G WD+  +VR +M
Sbjct: 1010 AVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMM 1069

Query: 728  EVTG 731
            +  G
Sbjct: 1070 KDAG 1073



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 283/580 (48%), Gaps = 10/580 (1%)

Query: 15   RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
            ++  HL+  G+      ST L++ Y ++G +  +   FD     D   W  LI  Y  N 
Sbjct: 463  QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522

Query: 75   FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            +   ++ L+ +M++            +L +C  L  +  G+ +HG  IK G   D  ++ 
Sbjct: 523  YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582

Query: 135  SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++   Y + G L+ A  +F++M  + VVSW+++I +Y  N    E + +F  M+  GVE 
Sbjct: 583  ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEV 642

Query: 195  DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              VT++SL  A           SIH + ++  +  D  +  S I MY++ G    AE  +
Sbjct: 643  SQVTIMSLPSANAN------PESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLY 696

Query: 255  VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
              + ++   S TA+I+ Y  +G     +ESF +M ++  +P+ + ++++L   A    + 
Sbjct: 697  WSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHIC 756

Query: 315  EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
             G   H   I+ G+   ++ +   LI  Y++   +     +   + E+ ++SWN +IS  
Sbjct: 757  IGHVFHGYAIKSGLD-TFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGC 815

Query: 375  ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
             + G +  A+EL  QM+  G  PD+ ++AS LS C  +G LQ G ++H ++++   + ++
Sbjct: 816  VQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMED 875

Query: 434  FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            FV ++LI MY+KCG    A  +F+ I +  +  WN+MI G+   G   +A+  + +M   
Sbjct: 876  FVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQ 935

Query: 494  CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQT 552
             +E D++TFL  + AC++ G + +G+     +   Y +   +     +  + A+ G  + 
Sbjct: 936  GVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEE 995

Query: 553  AQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            A     +M  E +   W A +    +H ++     L K++
Sbjct: 996  ALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKL 1035



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 208/419 (49%), Gaps = 10/419 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  SC  L  + +   +H   + +GLH DP     L   YA+ G L ++  +F+   +  
Sbjct: 549 LLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKS 608

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N FF+E++ ++ +MI     +S     S+  A +      + E +H 
Sbjct: 609 VVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANA------NPESIHC 662

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK G   D  + TS++C Y  +G  D A  ++  +  +++VS ++II SY +  ++  
Sbjct: 663 YTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGL 722

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            ++ F  M +  ++PD V MLS+     +   +      HG+ ++  +     + N  I 
Sbjct: 723 VMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLIS 782

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSK  ++ +    F  + ++   SW ++IS   ++G    A+E F +M      P+ IT
Sbjct: 783 MYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAIT 842

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++L  C+ LG+L+ G+ +H  I+R  +  E D++G ALI  Y +CG +   E+V  +I
Sbjct: 843 IASLLSGCSQLGYLQFGERLHSYILRNKLEME-DFVGTALIHMYTKCGSIVHAERVFKSI 901

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           G+  + +WN +IS Y+  G   +AL    +MQ  G+ PD  +    L+AC + G +  G
Sbjct: 902 GKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEG 960


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 194/599 (32%), Positives = 329/599 (54%), Gaps = 4/599 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSL 202
           G L  +R +FDKMT RD +SW+++IA Y + +D  E L +F +M V+ G++ D   +   
Sbjct: 104 GQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVA 163

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            +ACG   ++     +HG  ++  +     + ++ I MY K G +    R F K+ KR  
Sbjct: 164 LKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNV 223

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SWTA+I+    +G+  +AL  F +M   K   +  T    L + A    L  GK++H Q
Sbjct: 224 VSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 283

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            I++G   E  ++   L   Y +CGK     ++   +   +++SW  LI+ Y +KG  + 
Sbjct: 284 TIKQGFD-ESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEH 342

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLID 441
           A+E   +M+   + P+ ++ A+ +SAC N+   + G QIHGHV+++   D   V +S++ 
Sbjct: 343 AVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVT 402

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +YSK G    A L+F  I +K ++ W+++I  + Q G + EA +    M     + +E  
Sbjct: 403 LYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFA 462

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             + +  C ++  LE+GK VH  ++  G+  +  + +AL  MY+KCG ++ A ++F+ M 
Sbjct: 463 LSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
             N++SW+AMI+ Y  HG   +A +LF+++   G+KP+ VTF+ +L ACSH+G V+ G +
Sbjct: 523 INNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFY 582

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           YF  M   + + P  +HY C++DLL R+G +  A  MI SMP   +  +W  LL  CR+H
Sbjct: 583 YFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVH 642

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +D  +   ++L     N  G +  L+NIYA +G W E   +R +M+  G+ K  G+S
Sbjct: 643 GDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWS 701



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 284/568 (50%), Gaps = 7/568 (1%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATIS 94
           ++   + G L  SR +FD     D   W  LI  Y+  +   E+++L+  M ++      
Sbjct: 97  LKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRD 156

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F+    L+AC    ++  GE +HG  +K G      + ++++  Y + G ++   +VF 
Sbjct: 157 QFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFK 216

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KMT R+VVSW++IIA         E L  F  M    V  D  T     +A  +   L  
Sbjct: 217 KMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHH 276

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            ++IH   +++       + N+   MY+KCG      R F K++     SWT +I+ Y +
Sbjct: 277 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQ 336

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G  + A+E+F +M +    PN  T   V+ +CA L   + G+ +H  ++R G+      
Sbjct: 337 KGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALS- 395

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +++  Y++ G +     V H I  ++I+SW+ +I+ Y++ G +KEA + L  M+  G
Sbjct: 396 VANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREG 455

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAY 453
             P+ F+++S LS CG++  L+ G Q+H HV+ I    E  V S+LI MYSKCG    A 
Sbjct: 456 PKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEAS 515

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F  ++  +++ W +MI G+ ++G S EAINLF ++    L+ D VTF+  + ACS+ G
Sbjct: 516 KIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAG 575

Query: 514 QLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAM 571
            ++ G +    + + Y +         + D+  + G L  A+ +  SM    + V WS +
Sbjct: 576 MVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTL 635

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           +    +HG ++      +Q+L   + PN
Sbjct: 636 LRSCRVHGDVDRGRWTAEQLLR--LDPN 661



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 251/554 (45%), Gaps = 40/554 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   + +GL      S+ LI+ Y ++G +     VF    + +   W  +I   +   +
Sbjct: 179 LHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGY 238

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E++L + +M   +    +  +   L+A +    L  G+ +H + IK GFD+   +  +
Sbjct: 239 NMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 298

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y + G  D   ++F+KM   DVVSW+++I +Y    +    ++ F  M +  V P+
Sbjct: 299 LATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPN 358

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  ++  AC  L   +    IHGHVLR  +     + NS + +YSK G L SA   F 
Sbjct: 359 KYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFH 418

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I ++   SW+ +I+ Y++ G+ ++A +    M     +PN   L +VL  C  +  L +
Sbjct: 419 GITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 478

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH  ++  G+  E   +  ALI  Y++CG + E  K+ + +   NI+SW  +I+ YA
Sbjct: 479 GKQVHAHVLCIGIDHE-AMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYA 537

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKD 432
             G S+EA+ L  ++ + GL PD  +    L+AC + G + LG     +  +  +I    
Sbjct: 538 EHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSK 597

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           E     +ID+  + G          R+ +    M  SM C                    
Sbjct: 598 EHY-GCIIDLLCRAG----------RLSEAE-HMIRSMPC-------------------- 625

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
                D+V + T +++C   G +++G+W   +L+            AL ++YA  G  + 
Sbjct: 626 ---YTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLD-PNSAGTHIALANIYAAKGRWKE 681

Query: 553 AQRVFDSMSERNVV 566
           A  +   M  + V+
Sbjct: 682 AAHIRKLMKSKGVI 695



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 107/207 (51%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C NL   +   ++H H+L  GL      +  ++  Y++ G L+S+ LVF      D
Sbjct: 365 VISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKD 424

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y    + +E+      M RE    + F   SVL  C S+  L  G++VH 
Sbjct: 425 IISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHA 484

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++  G D + ++ ++++  Y + G +++A K+F+ M   +++SW+++I  Y ++    E
Sbjct: 485 HVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQE 544

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            + +F  +   G++PD+VT + +  AC
Sbjct: 545 AINLFEKISSVGLKPDYVTFIGVLTAC 571


>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/616 (31%), Positives = 330/616 (53%), Gaps = 4/616 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++HA ++  GL     A   LI+ YA+ G +RS+R VFD     DS  W  +I  Y  
Sbjct: 208 VEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQ 267

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N F EE+I L+ +M     + + +++ SVL AC+ +     GE++H  + KCGF  +  +
Sbjct: 268 NGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYV 327

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y   G    A++VF K+  +D VS++S+I+           L++F  M  + +
Sbjct: 328 CNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHL 387

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD VT+ SL  AC  + SL     +H + ++  + +D  +  S + +Y KC D+ +A +
Sbjct: 388 KPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHK 447

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F   +      W  M+  Y +     K+   F +M      PN  T  ++L +C   G 
Sbjct: 448 FFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGA 507

Query: 313 LREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
           L  G+ +H Q I+ G   E++ Y+   LI+ YA+ GK+     ++  + E +++SW  LI
Sbjct: 508 LDLGEQIHSQAIKTGF--EFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALI 565

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH-VIKIDC 430
           + Y +  +  EAL L  +M   G+  D+   +S++SAC  + +L  G QIH    I    
Sbjct: 566 AGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYS 625

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           +D  + ++L+ +Y++CG    A L FE+I  K  + WN+++ GF Q+G   EA+ +F QM
Sbjct: 626 EDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQM 685

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               ++    TF +A+ A +N+  +++GK +H  ++  G   +I +  AL  +YAKCG +
Sbjct: 686 TRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCI 745

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+R F  + E+N +SW+AMI  Y  HG   +A +LF++M   G KPN VTF+ ++ AC
Sbjct: 746 DGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISAC 805

Query: 611 SHSGSVEEGKFYFNAM 626
           SH G V EG  YF +M
Sbjct: 806 SHVGLVNEGLAYFESM 821



 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/674 (27%), Positives = 341/674 (50%), Gaps = 16/674 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH+ +L  G   +     +LIE Y  +G L S   VFD         W  ++   + N 
Sbjct: 108 KLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANK 167

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG-------EKVHGRIIKCGFD 127
                + L+ +M+ E    +     SVLRA       GSG       E++H  II  G  
Sbjct: 168 TSNRVLGLFAQMVEENVNPNEVTVASVLRA------YGSGNVAFYYVEQIHASIISRGLG 221

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
              +    ++  Y + G +  ARKVFD++  +D VSW ++I+SY  N    E +++F  M
Sbjct: 222 TSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEM 281

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
              G+ P      S+  AC ++        +H  V +    ++  + N+ + +YS+ G+ 
Sbjct: 282 HISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNF 341

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
           +SA++ F KI+ +   S+ ++IS  ++ G   +ALE F KM     +P+ +T+ ++L +C
Sbjct: 342 ISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSAC 401

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A +  L +G+ +H   I+ GM  +    G +L++ Y +C  ++   K        N++ W
Sbjct: 402 ASIKSLSKGEQLHSYAIKAGMCLDIIIEG-SLLDLYVKCSDITTAHKFFATTQTENVVLW 460

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N+++  Y +     ++  +  QMQ  GL+P+ F+  S L  C + G+L LG QIH   IK
Sbjct: 461 NVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIK 520

Query: 428 IDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
              + + +V S LIDMY+K G  ++A  +  R+ ++ VV W ++I G+ Q+    EA+NL
Sbjct: 521 TGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNL 580

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F +M    ++ D + F +AI AC+ I  L +G+ +H +    G  +D+ I  AL  +YA+
Sbjct: 581 FDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYAR 640

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG +Q A   F+ +  ++ +SW+A++  +   G   +A  +F QM  + IK +  TF + 
Sbjct: 641 CGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSA 700

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           + A ++  ++++GK     +   G + +++    ++ L ++ G I+GA +    +P   N
Sbjct: 701 VSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIP-EKN 759

Query: 667 GSIWGALLNGCRIH 680
              W A++ G   H
Sbjct: 760 EISWNAMITGYSQH 773



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 177/565 (31%), Positives = 301/565 (53%), Gaps = 6/565 (1%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           +K+H +I+K GFDK+ V+   ++  Y   G L+   KVFD M SR +++W+ +++    N
Sbjct: 107 KKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVAN 166

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE-LCSLRPARSIHGHVLRRKIKIDGPL 233
              +  L +F  MV E V P+ VT+ S+  A G    +      IH  ++ R +      
Sbjct: 167 KTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIA 226

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N  I +Y+K G + SA + F ++  + + SW A+IS Y+++G+ ++A+  F +M     
Sbjct: 227 CNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGL 286

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            P      +VL +CA +     G+ +H  + + G   E  Y+  AL+  Y+  G     +
Sbjct: 287 SPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLE-TYVCNALVTLYSRLGNFISAQ 345

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V   I  ++ +S+N LIS  +++G S  ALEL  +MQ   L PD  +VAS LSAC ++ 
Sbjct: 346 QVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIK 405

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           SL  G Q+H + IK   C D  ++ SL+D+Y KC     A+  F   Q ++VV+WN M+ 
Sbjct: 406 SLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLV 465

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            + Q  N  ++  +F QM +  L  ++ T+ + ++ C++ G L+ G+ +H + I  G   
Sbjct: 466 AYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEF 525

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           ++Y+ + L DMYAK G L  A+ +   ++E +VVSW+A+I  Y  H    +A +LF +ML
Sbjct: 526 NVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEML 585

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
           + GI+ + + F + + AC+   ++ +G+       I G   DL     +V L +R G I+
Sbjct: 586 NRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQ 645

Query: 653 GAFKMIHSMPFPANGSI-WGALLNG 676
            A      +   A  SI W AL++G
Sbjct: 646 EANLAFEKI--DAKDSISWNALMSG 668



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 231/437 (52%), Gaps = 11/437 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C +++ L++   LH++ +  G+  D      L++ Y +   + ++   F T +  +
Sbjct: 397 LLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTEN 456

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             +W V++  Y   +   +S  ++ +M  E    + F YPS+LR C+S G L  GE++H 
Sbjct: 457 VVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHS 516

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + IK GF+ +  + + ++  Y + G LD AR +  ++   DVVSW+++IA Y  +   +E
Sbjct: 517 QAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTE 576

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M+  G++ D +   S   AC  + +L   + IH          D  +GN+ + 
Sbjct: 577 ALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVS 636

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +Y++CG +  A   F KI+ + + SW A++S + +SG+ ++AL+ F +M     + +L T
Sbjct: 637 LYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFT 696

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             + + + A +  +++GK +H  I++ G   E + +  ALI  YA+CG +   ++    I
Sbjct: 697 FGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIE-VSNALITLYAKCGCIDGAKREFFEI 755

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+N +SWN +I+ Y++ G   EA+ L  +M+  G  P+  +    +SAC +VG +  GL
Sbjct: 756 PEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISACSHVGLVNEGL 815

Query: 420 -------QIHGHVIKID 429
                  + HG +I ++
Sbjct: 816 AYFESMSKEHGLIIGLE 832



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 254/512 (49%), Gaps = 8/512 (1%)

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           +N + + G+   H +   G      T L L + C    S    + +H  +L+     +  
Sbjct: 64  ENEESARGIDFLHVVDERGSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESV 123

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           L +  I  Y   GDL S  + F  +  R   +W  ++S    +    + L  F +M+E  
Sbjct: 124 LCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEEN 183

Query: 293 EEPNLITLITVLGSC-AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             PN +T+ +VL +  +G       + +H  II +G+G       P LI+ YA+ G +  
Sbjct: 184 VNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNP-LIDLYAKNGFIRS 242

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             KV   +  ++ +SW  +IS Y++ G  +EA+ L  +M   GL P  +  +S LSAC  
Sbjct: 243 ARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAK 302

Query: 412 VGSLQLGLQIHGHVIKIDCK---DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
           +    +G Q+H  V K  C    + +V ++L+ +YS+ G    A  +F +I+ K  V +N
Sbjct: 303 IELFDIGEQLHALVFK--CGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYN 360

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           S+I G  Q G S  A+ LF +M L+ L+ D VT  + + AC++I  L KG+ +H   I  
Sbjct: 361 SLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKA 420

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
           G+  DI I+ +L D+Y KC D+ TA + F +    NVV W+ M+  YG    L+ +  +F
Sbjct: 421 GMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIF 480

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
           +QM   G+ PN+ T+ +IL  C+  G+++ G+   +     G E ++   + ++D+ ++ 
Sbjct: 481 RQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKL 540

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           G ++ A  ++  +    +   W AL+ G   H
Sbjct: 541 GKLDIARGILRRLN-EEDVVSWTALIAGYTQH 571


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 201/569 (35%), Positives = 309/569 (54%), Gaps = 14/569 (2%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+R  V P+  T     +AC  L      R+IH H +   ++ D  +  + + MY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV--KMLEVKEEPNLITLITVL 304
           L  A   F  +  R   +W AM++ Y   G +  A+   +  +M   +  PN  TL+ +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYD---------YLGPALIEFYAECGKMSECEKV 355
              A  G L +G SVH   IR  + P  +          LG AL++ YA+CG +    +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL-MPDSFSVASSLSACGNVGS 414
             A+  RN ++W+ LI  +       +A  L   M   GL      S+AS+L AC ++  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 415 LQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L++G Q+H  + K     +    +SL+ MY+K G  + A  LF+ +  K  V +++++ G
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + QNG + EA  +F +M    +E D  T ++ I ACS++  L+ G+  H  +I  G+  +
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             I  AL DMYAKCG +  +++VF+ M  R++VSW+ MI  YG+HG   +A +LF +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
            G  P+ VTF+ +L ACSHSG V EGK +F+ M   +G+ P ++HY CMVDLLSR G ++
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A++ I SMP  A+  +W ALL  CR++K ID+ K + + +   G    G + LLSNIY+
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G +DE  +VR I +V G KK PG S I
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWI 569



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 255/507 (50%), Gaps = 25/507 (4%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+R +   +N+ +P  L+ACS+L D   G  +H   I  G   D  + T++L  Y +  C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNA----DVSEGLKMFHSMVREGVEPDFVTMLS 201
           L DA  +F  M +RD+V+W++++A Y  +      V+  L M   M R  + P+  T+++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVA 118

Query: 202 LAEACGELCSLRPARSIHGHVLR--------RKIKI-DGP-LGNSFIVMYSKCGDLLSAE 251
           L     +  +L    S+H + +R         K K+ DG  LG + + MY+KCG LL A 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK---EEPNLITLITVLGSCA 308
           R F  +  R   +W+A+I  +       +A   F  ML        P   ++ + L +CA
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACA 236

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L  LR G+ +H  + + G+  +    G +L+  YA+ G + +   +   +  ++ +S++
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            L+S Y + G ++EA  +  +MQ   + PD+ ++ S + AC ++ +LQ G   HG VI  
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355

Query: 429 DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               E  + ++LIDMY+KCG  +L+  +F  +  + +V WN+MI G+  +G   EA  LF
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAK 546
            +M       D VTF+  + ACS+ G + +GK W H     YG+   +     + D+ ++
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475

Query: 547 CGDLQTAQRVFDSMSER-NVVSWSAMI 572
            G L  A     SM  R +V  W A++
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALL 502



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 189/387 (48%), Gaps = 20/387 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPAS----------TRLIESYAEMGSLRSSRL 50
           +PL      L + T +HA+ +   LH +  +           T L++ YA+ GSL  +R 
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYP----SVLRACS 106
           VFD     +   W+ LI  ++  +   ++ LL+  M+ +      F+ P    S LRAC+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC---FLSPTSIASALRACA 236

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           SL  L  GE++H  + K G   D     S+L  Y + G +D A  +FD+M  +D VS+S+
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           +++ Y  N    E   +F  M    VEPD  TM+SL  AC  L +L+  R  HG V+ R 
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           +  +  + N+ I MY+KCG +  + + F  +  R   SW  MI+ Y   G  ++A   F+
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEFYAE 345
           +M  +   P+ +T I +L +C+  G + EGK   H      G+ P  ++    +++  + 
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY-ICMVDLLSR 475

Query: 346 CGKMSECEKVIHAIGER-NILSWNMLI 371
            G + E  + I ++  R ++  W  L+
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALL 502


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 201/569 (35%), Positives = 309/569 (54%), Gaps = 14/569 (2%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+R  V P+  T     +AC  L      R+IH H +   ++ D  +  + + MY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV--KMLEVKEEPNLITLITVL 304
           L  A   F  +  R   +W AM++ Y   G +  A+   +  +M   +  PN  TL+ +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYD---------YLGPALIEFYAECGKMSECEKV 355
              A  G L +G SVH   IR  + P  +          LG AL++ YA+CG +    +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL-MPDSFSVASSLSACGNVGS 414
             A+  RN ++W+ LI  +       +A  L   M   GL      S+AS+L AC ++  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 415 LQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L++G Q+H  + K     +    +SL+ MY+K G  + A  LF+ +  K  V +++++ G
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + QNG + EA  +F +M    +E D  T ++ I ACS++  L+ G+  H  +I  G+  +
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             I  AL DMYAKCG +  +++VF+ M  R++VSW+ MI  YG+HG   +A +LF +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
            G  P+ VTF+ +L ACSHSG V EGK +F+ M   +G+ P ++HY CMVDLLSR G ++
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A++ I SMP  A+  +W ALL  CR++K ID+ K + + +   G    G + LLSNIY+
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             G +DE  +VR I +V G KK PG S I
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWI 569



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 255/507 (50%), Gaps = 25/507 (4%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+R +   +N+ +P  L+ACS+L D   G  +H   I  G   D  + T++L  Y +  C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNA----DVSEGLKMFHSMVREGVEPDFVTMLS 201
           L DA  +F  M +RD+V+W++++A Y  +      V+  L M   M R  + P+  T+++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVA 118

Query: 202 LAEACGELCSLRPARSIHGHVLR--------RKIKI-DGP-LGNSFIVMYSKCGDLLSAE 251
           L     +  +L    S+H + +R         K K+ DG  LG + + MY+KCG LL A 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK---EEPNLITLITVLGSCA 308
           R F  +  R   +W+A+I  +       +A   F  ML        P   ++ + L +CA
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACA 236

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L  LR G+ +H  + + G+  +    G +L+  YA+ G + +   +   +  ++ +S++
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            L+S Y + G ++EA  +  +MQ   + PD+ ++ S + AC ++ +LQ G   HG VI  
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355

Query: 429 DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               E  + ++LIDMY+KCG  +L+  +F  +  + +V WN+MI G+  +G   EA  LF
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAK 546
            +M       D VTF+  + ACS+ G + +GK W H     YG+   +     + D+ ++
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475

Query: 547 CGDLQTAQRVFDSMSER-NVVSWSAMI 572
            G L  A     SM  R +V  W A++
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALL 502



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 189/387 (48%), Gaps = 20/387 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPA----------STRLIESYAEMGSLRSSRL 50
           +PL      L + T +HA+ +   LH +  +           T L++ YA+ GSL  +R 
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYP----SVLRACS 106
           VFD     +   W+ LI  ++  +   ++ LL+  M+ +      F+ P    S LRAC+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC---FLSPTSIASALRACA 236

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           SL  L  GE++H  + K G   D     S+L  Y + G +D A  +FD+M  +D VS+S+
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           +++ Y  N    E   +F  M    VEPD  TM+SL  AC  L +L+  R  HG V+ R 
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           +  +  + N+ I MY+KCG +  + + F  +  R   SW  MI+ Y   G  ++A   F+
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEFYAE 345
           +M  +   P+ +T I +L +C+  G + EGK   H      G+ P  ++    +++  + 
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY-ICMVDLLSR 475

Query: 346 CGKMSECEKVIHAIGER-NILSWNMLI 371
            G + E  + I ++  R ++  W  L+
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALL 502


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 195/595 (32%), Positives = 342/595 (57%), Gaps = 17/595 (2%)

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           RD+VSWS++I+ Y +N    E +  F  M+  G  P+      +  AC    ++   + I
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 219 HGHVLRRK-IKIDGPLGNSFIVMYSKC-GDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            G +L+    + D  +G + I M+ K  GDL SA + F ++  R   +WT MI+ + + G
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + + A++ F+ M+     P+  TL  V+ +CA +G L  G+  HC +++ G+  +   +G
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV-CVG 183

Query: 337 PALIEFYAEC---GKMSECEKVIHAIGERNILSWNMLISEYARKG-MSKEALELLVQMQT 392
            +L++ YA+C   G + +  KV   +   N++SW  +I+ Y + G   +EA+EL ++M  
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-----IDCKDEFVQSSLIDMYSKCG 447
             + P+ F+ +S L AC N+  + LG Q++  V+K     I+C    V +SLI MYS+CG
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINC----VGNSLISMYSRCG 299

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A   F+ + +K++V +N+++  + ++ NS EA  LF+++      ++  TF + + 
Sbjct: 300 NMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLS 359

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
             S+IG + KG+ +H +++  G + +++I  AL  MY++CG+++ A +VF+ M + NV+S
Sbjct: 360 GASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVIS 419

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W++MI  +  HG    A   F +ML++G+ PNEVT++ +L ACSH G + EG  +F +M+
Sbjct: 420 WTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMK 479

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           +  G+ P ++HYAC+VDLL RSG +E A ++++SMPF A+  +    L  CR+H  +D+ 
Sbjct: 480 VEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLG 539

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K   + +     +D   Y LLSN++A  G W+E  ++R  M+   L K  G S I
Sbjct: 540 KHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWI 594



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 274/510 (53%), Gaps = 9/510 (1%)

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W+ LI CY  N    E+I  +  M+      + + +  V RACS+  ++  G+ + 
Sbjct: 6   DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65

Query: 119 GRIIKCGFDKDDV-IQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           G ++K G+ + DV +  +++  + +  G L+ A KVFD+M  R+VV+W+ +I  +     
Sbjct: 66  GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGF 125

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             + + +F  MV  G  PD  T+  +  AC E+  L   R  H  V++  + +D  +G S
Sbjct: 126 SRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185

Query: 237 FIVMYSKC---GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK-ALESFVKMLEVK 292
            + MY+KC   G +  A + F ++      SWTA+I+ Y +SG   + A+E F++M++ +
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQ 245

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            +PN  T  +VL +CA L  +  G+ V+  +++  +    + +G +LI  Y+ CG M   
Sbjct: 246 VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLAS-INCVGNSLISMYSRCGNMENA 304

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            K    + E+N++S+N +++ YA+   S+EA EL  +++  G   ++F+ AS LS   ++
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           G++  G QIH  ++K   K    + ++LI MYS+CG    A+ +F  +   +V+ W SMI
Sbjct: 365 GAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMI 424

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGV 530
            GF ++G +  A+  FH+M    +  +EVT++  + ACS++G + +G K      + +G+
Sbjct: 425 TGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGI 484

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              +     + D+  + G L+ A  + +SM
Sbjct: 485 VPRMEHYACVVDLLGRSGHLEEAMELVNSM 514



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 244/460 (53%), Gaps = 13/460 (2%)

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
           KR   SW+A+ISCY  +    +A+ +F  MLE    PN      V  +C+    +  GK 
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAEC-GKMSECEKVIHAIGERNILSWNMLISEYARK 377
           +   +++ G       +G ALI+ + +  G +    KV   + +RN+++W ++I+ + + 
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQ 436
           G S++A++L + M   G +PD F+++  +SAC  +G L LG Q H  V+K     D  V 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 437 SSLIDMYSKC---GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMYL 492
            SL+DMY+KC   G  + A  +F+R+   +V+ W ++I G+ Q+G    EAI LF +M  
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             ++ +  TF + ++AC+N+  +  G+ V+  ++   +     +  +L  MY++CG+++ 
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A++ FD + E+N+VS++ +++ Y       +A  LF ++  +G   N  TF ++L   S 
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI--W 670
            G++ +G+   + +   G + +L     ++ + SR G+IE AF++ + M    +G++  W
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEM---GDGNVISW 420

Query: 671 GALLNGCRIHK-RIDVMKTIEKELSV-TGTNDNGYYTLLS 708
            +++ G   H      ++T  K L      N+  Y  +LS
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/576 (24%), Positives = 278/576 (48%), Gaps = 49/576 (8%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTG-LHYDPPASTRLIESYAE-MGSLRSSRLVFDTFKE 57
           +FR+C+N   ++    +   LL TG    D      LI+ + +  G L S+  VFD   +
Sbjct: 48  VFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD 107

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W ++I  +    F  +++ L+  M+        F    V+ AC+ +G L  G + 
Sbjct: 108 RNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 167

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEF---GCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           H  ++K G D D  +  S++  Y +    G +DDARKVFD+M   +V+SW++II  Y  +
Sbjct: 168 HCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQS 227

Query: 175 ADVS-EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                E +++F  MV+  V+P+  T  S+ +AC  L  +     ++  V++ ++     +
Sbjct: 228 GGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV 287

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           GNS I MYS+CG++ +A + F  + ++   S+  +++ Y +S   ++A E F ++     
Sbjct: 288 GNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGT 347

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             N  T  ++L   + +G + +G+ +H +I++ G      ++  ALI  Y+ CG +    
Sbjct: 348 GVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNL-HICNALISMYSRCGNIEAAF 406

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V + +G+ N++SW  +I+ +A+ G +  ALE   +M   G+ P+  +  + LSAC +VG
Sbjct: 407 QVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVG 466

Query: 414 SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
            +  GL+ H   +K++                       + +  R++  + V+    + G
Sbjct: 467 LISEGLK-HFKSMKVE-----------------------HGIVPRMEHYACVV---DLLG 499

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             ++G+  EA+ L + M     + D +   T + AC   G ++ GK     ++     +D
Sbjct: 500 --RSGHLEEAMELVNSMP---FKADALVLRTFLGACRVHGNMDLGKHAAEMIL----EQD 550

Query: 534 IYIDTA---LTDMYAKCGDLQTAQRVFDSMSERNVV 566
            +   A   L++++A  G  +    +   M ERN+ 
Sbjct: 551 PHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLT 586



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           ++R++VSWSA+I CY  + +  +A S F  ML+ G  PNE  F  +  ACS+  ++  GK
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 621 FYFNAMRIFG-VEPDLQHYACMVDLLSR-SGDIEGAFKMIHSMP 662
             F  +   G  E D+     ++D+  + +GD+E A+K+   MP
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106


>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
          Length = 824

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 222/750 (29%), Positives = 382/750 (50%), Gaps = 59/750 (7%)

Query: 9   NLRKLTRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           +LR   ++HA +L  G  Y  +    T+L+  YA+  +L  + ++F   +  + F WA +
Sbjct: 77  DLRTGQQIHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAI 136

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I         E +++ + +M+       NF+ P+V +AC +L     G  VHG + K G 
Sbjct: 137 IGVKCRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGL 196

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
                + +S+   YG+ G LDDARKVFD++  R+VV+W++++  Y  N    E +++   
Sbjct: 197 HDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSD 256

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M +EGVEP  VT+ +   A   +  +   +  H   +   +++D  LG S +  Y K G 
Sbjct: 257 MRKEGVEPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGL 316

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL----ITLIT 302
           +  AE  F ++ ++   +W  +IS Y   G  + A    + M ++    NL    +TL T
Sbjct: 317 IDYAEMIFDRMIEKDVVTWNLLISGYVHQGLVENA----IYMCQLMRLENLKFDCVTLST 372

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           ++ + A    L+ GK V C  IR     +   L    ++ YA+CG + + +KV  +  ++
Sbjct: 373 LMSAAARTQNLKLGKEVQCYCIRHSFESDI-VLASTAVDMYAKCGSVVDAKKVFDSTVQK 431

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS---VASSLSACGNVGSLQLGL 419
           +++ WN L++ YA  G+S EAL L  +MQ   + P+  +   +  SL   G V       
Sbjct: 432 DLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVN------ 485

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
                    + K+ F+Q     M S   F N+             + W +M+ G  QNG 
Sbjct: 486 ---------EAKEMFLQ-----MQSSGTFPNM-------------ISWTTMMNGLVQNGC 518

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY---- 535
           S EAI    +M  + +  +  +   A+ AC N+  L  G+ +H     Y +R   +    
Sbjct: 519 SEEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIH----GYIIRNQQHSSSA 574

Query: 536 -IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LD 593
            I+T+L DMYAKCGD+  A+RVF S     +  ++AMI  Y ++G + +A +L++ +  D
Sbjct: 575 SIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAVALYRSLEED 634

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
            GIKP+ +T  N+L AC+H+G + +  + + + +   G++P L+HY  MVDLL+ +G+ E
Sbjct: 635 VGIKPDNITITNVLSACNHAGDINQAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAGETE 694

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHK-RIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
            A  +I  MP+  +  +  +L+  C+  + + ++M  +  +L  +   ++G Y  +SN Y
Sbjct: 695 KALSLIEEMPYKPDARMIQSLVASCKKQQHKSELMDYLSSQLLESEPENSGNYVRVSNAY 754

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A EG+WDE  K+R +M+V GLKK PG S I
Sbjct: 755 AVEGSWDEVVKMREMMKVKGLKKKPGCSWI 784


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 204/654 (31%), Positives = 345/654 (52%), Gaps = 18/654 (2%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           SNFI   +LR     G + +  KV+  +      K+ V   +++  + + G +  AR +F
Sbjct: 51  SNFIVEDLLRR----GQVSAARKVYDEMPH----KNTVSTNTMISGHVKTGDVSSARDLF 102

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG--VEPDFVTMLSLAEACGELCS 211
           D M  R VV+W+ ++  Y  N+   E  K+F  M R      PD VT  +L   C +   
Sbjct: 103 DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVP 162

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG--DLLSAERTFVKIEKRCTTSWTAMI 269
                 +H   ++     +  L  S +++ S C    L  A   F +I ++ + ++  +I
Sbjct: 163 QNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLI 222

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y + G + +++  F+KM +   +P+  T   VL +  GL     G+ +H   +  G  
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   +G  +++FY++  ++ E   +   + E + +S+N++IS Y++    + +L    +
Sbjct: 283 RDAS-VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCG 447
           MQ  G    +F  A+ LS   N+ SLQ+G Q+H   + +   D    V +SL+DMY+KC 
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCE 400

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A L+F+ + Q++ V W ++I G+ Q G     + LF +M  + L  D+ TF T ++
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           A ++   L  GK +H  +I  G  ++++  + L DMYAKCG ++ A +VF+ M +RN VS
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+A+I  +  +G    A   F +M++SG++P+ V+ + +L ACSH G VE+G  YF AM 
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580

Query: 628 -IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
            I+G+ P  +HYACM+DLL R+G    A K++  MPF  +  +W ++LN CRIHK   + 
Sbjct: 581 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLA 640

Query: 687 -KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            +  EK  S+    D   Y  +SNIYA  G W++   V+  M   G+KKVP YS
Sbjct: 641 ERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/614 (24%), Positives = 298/614 (48%), Gaps = 8/614 (1%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H +  ++  +I  + + G + S+R +FD   +     W +L+  Y  N+ F+E+  L+ +
Sbjct: 76  HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135

Query: 86  MIREQA-TISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS--ILCTYG 141
           M R  + T+ + + + ++L  C+      +  +VH   +K GFD +  +  S  +L +Y 
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           E   LD A  +F+++  +D V+++++I  Y  +   +E + +F  M + G +P   T   
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           + +A   L      + +H   +      D  +GN  +  YSK   +L     F ++ +  
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             S+  +IS Y+++  ++ +L  F +M  +  +       T+L   A L  L+ G+ +HC
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           Q +         ++G +L++ YA+C    E E +  ++ +R  +SW  LIS Y +KG+  
Sbjct: 376 QALL-ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLI 440
             L+L  +M+   L  D  + A+ L A  +  SL LG Q+H  +I+  + ++ F  S L+
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMY+KCG    A  +FE +  ++ V WN++I     NG+   AI  F +M  + L+ D V
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           + L  + ACS+ G +E+G      +   YG+         + D+  + G    A+++ D 
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614

Query: 560 MS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           M  E + + WS++++   +H   + A    +++       +   ++++    + +G  E+
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674

Query: 619 GKFYFNAMRIFGVE 632
            +    AMR  G++
Sbjct: 675 VRDVKKAMRERGIK 688



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 250/531 (47%), Gaps = 22/531 (4%)

Query: 15  RLHAHLLVTGLHYDP--PASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           ++HA  +  G   +P    S  L++SY E+  L  + ++F+   E DS  +  LI  Y  
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           +  + ESI L+ KM +     S+F +  VL+A   L D   G+++H   +  GF +D  +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              IL  Y +   + + R +FD+M   D VS++ +I+SY         L  F  M   G 
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347

Query: 193 EP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +     F TMLS+A     L SL+  R +H   L         +GNS + MY+KC     
Sbjct: 348 DRRNFPFATMLSIA---ANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           AE  F  + +R T SWTA+IS Y + G     L+ F KM       +  T  TVL + A 
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
              L  GK +H  IIR G   E  + G  L++ YA+CG + +  +V   + +RN +SWN 
Sbjct: 465 FASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVI 426
           LIS +A  G  + A+    +M   GL PDS S+   L+AC + G ++ G    Q    + 
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583

Query: 427 KIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMI--CGFYQNGNSLE- 482
            I  K +   + ++D+  + G F     L+ E   +   +MW+S++  C  ++N +  E 
Sbjct: 584 GITPKKKHY-ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAER 642

Query: 483 -AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            A  LF    L     D   +++     +  G+ EK + V   +   G++K
Sbjct: 643 AAEKLFSMEKLR----DAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKK 689


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 235/757 (31%), Positives = 392/757 (51%), Gaps = 27/757 (3%)

Query: 3   LFRSC---TNLRKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L ++C   +NL+    +H+ ++  G  Y DP  +T LI  Y + GS  ++  VFD   E 
Sbjct: 55  LLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPES 114

Query: 59  -----DSFMWAVLIKCYMWNNFFEESILLYHKM----IREQATISNFIYPSVLRACSSLG 109
                D   W  ++  Y      +E I  + +M    +R  A      Y   +   +S G
Sbjct: 115 EVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDA------YSLCILLGASDG 168

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSII 168
            LG  +++HG  ++  F  D  +++ ++  Y   G   DA ++F ++  + +VV+W+ +I
Sbjct: 169 HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMI 228

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC--GELCSLRPARSIHGHVLRRK 226
             + +N      L+++     E V+    +  S   AC  GE  S      +H  +++  
Sbjct: 229 GGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSF--GMQVHCDLVKLG 286

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
            + D  +  S + MYSKC  +  AE  F ++  + T  W AMIS Y  +G     L+ + 
Sbjct: 287 FENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYK 346

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           +M  ++  P+ +T   VL SC  +G    G+ +H +++++ +      L  AL+  Y++C
Sbjct: 347 QMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVA-LQSALLTMYSKC 405

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G   +   + + I  R++++W  +IS + +     EALE    M  +G  PDS  +AS +
Sbjct: 406 GNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVV 465

Query: 407 SACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           SAC  + ++ LG  IHG  IK    +D FV SSL+DMYSK  F  ++  +F  +  K++V
Sbjct: 466 SACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLV 525

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WNS+I  + +NG    +I+LF QM    L  D V+  + + + S++  L KGK VH  L
Sbjct: 526 AWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYL 585

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
           I   +  D+ ++ AL DMY KCG L+ AQ +F +M + N+V+W+ MI   G HG    A 
Sbjct: 586 IRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAM 645

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDL 644
           SLF +M   GI P+++TF+++L +C+H G +EEG   F  M +  G+EP ++HY  +VDL
Sbjct: 646 SLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDL 705

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
           L R+G ++ A+  + ++P   + SIW +LL  CR+H  +++ K    +L     +    Y
Sbjct: 706 LGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNY 765

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             L N+Y E    D    +R+ M+  GLKK PG S I
Sbjct: 766 VQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWI 802



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 184/604 (30%), Positives = 305/604 (50%), Gaps = 18/604 (2%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCL 146
           R     + F YPS+L+AC  L +L  G+ +H  II  G F  D  I TS++  Y + G  
Sbjct: 42  RNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSF 101

Query: 147 DDARKVFDKM-----TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
            +A KVFDK+     + +DV  W+SI+  YF      EG+  F  M   GV PD  ++  
Sbjct: 102 GNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCI 161

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-KR 260
           L  A      L  A+ IHG+ +R+    D  L +  I MY  CG  L A R F ++E K 
Sbjct: 162 LLGASDG--HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKG 219

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI--TLITVLGSCAGLGWLREGKS 318
              +W  MI  +  +G ++ +LE  V +L   E   L+  +  + L +C    ++  G  
Sbjct: 220 NVVAWNVMIGGFGENGLWENSLE--VYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQ 277

Query: 319 VHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
           VHC +++  +G E D Y+  +L+  Y++C  + + E V   +  +    WN +IS Y   
Sbjct: 278 VHCDLVK--LGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGN 335

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQ 436
           G S + L++  QM+   + PDS +  + LS+C  VGS   G  IH  ++K   +    +Q
Sbjct: 336 GRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQ 395

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           S+L+ MYSKCG  + A  +F  I+ + VV W SMI GF QN   +EA+  ++ M +   +
Sbjct: 396 SALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEK 455

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D     + + AC+ +  +  G  +H   I  G+ +D+++ ++L DMY+K    + +  V
Sbjct: 456 PDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNV 515

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           F  M  +N+V+W+++I CY  +G  + + SLF QM   G+ P+ V+  ++L + S    +
Sbjct: 516 FSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVL 575

Query: 617 EEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            +GK     +    +  DLQ    ++D+  + G ++ A  +  +M    N   W  ++ G
Sbjct: 576 RKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAG 634

Query: 677 CRIH 680
           C  H
Sbjct: 635 CGSH 638



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 224/449 (49%), Gaps = 35/449 (7%)

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T  ++L +C  L  L+ GK++H  II KG      Y+  +LI FY +CG      KV  
Sbjct: 50  FTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFD 109

Query: 358 AIGE-----RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            + E     +++  WN +++ Y R G  KE +    +MQ +G+ PD++S+   L A    
Sbjct: 110 KLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASD-- 167

Query: 413 GSLQLGLQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSM 470
           G L    QIHG+ V K+   D F++S LI MY  CG    A+ LF+ ++ K +VV WN M
Sbjct: 168 GHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVM 227

Query: 471 ICGFYQNG---NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           I GF +NG   NSLE   L        +++   +F + + AC     +  G  VH  L+ 
Sbjct: 228 IGGFGENGLWENSLEVYLLAKN---ENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVK 284

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            G   D Y+ T+L  MY+KC  ++ A+ VFD +S +    W+AMI  Y  +G+  D   +
Sbjct: 285 LGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKI 344

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
           +KQM    I P+ +T  N+L +C   GS + G+     +    ++ ++   + ++ + S+
Sbjct: 345 YKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSK 404

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
            G+ + A  + +++    +   WG++++G C+  K ++ ++               +Y  
Sbjct: 405 CGNSDDANSIFNTIK-GRDVVAWGSMISGFCQNRKYMEALE---------------FYNS 448

Query: 707 LSNIYAEEGNWDEFGKVRSIMEVTGLKKV 735
           ++ +Y E+ + D    V S    TGLK V
Sbjct: 449 MT-VYGEKPDSDIMASVVS--ACTGLKNV 474


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/665 (31%), Positives = 356/665 (53%), Gaps = 21/665 (3%)

Query: 91  ATISNFIYPSVL-RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
            T S  I  S+L +AC   G+L  G+ +H ++I  G   D V+  S++  Y + G  ++A
Sbjct: 34  TTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENA 93

Query: 150 RKVFDKM--TSRDVVSWSSIIASYFDNADVSEGLKMFHSMV---REGVEPDFVTMLSLAE 204
             +F  M    RD+VSWS+II+ + +N+  S  L  F  M+   R  + P+     +L  
Sbjct: 94  LSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLR 153

Query: 205 ACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSKCG-DLLSAERTFVKIEKRCT 262
           +C          +I   +L+         +G + I M++K G D+ SA   F K++ +  
Sbjct: 154 SCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNL 213

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +WT MI+ Y++ G    A++ F ++L  +  P+  TL ++L +C  L +   GK +H  
Sbjct: 214 VTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSW 273

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +IR G+  +  ++G  L++ YA+   +    K+ + +   N++SW  LIS Y +    +E
Sbjct: 274 VIRSGLASDV-FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQE 332

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-----IDCKDEFVQS 437
           A++L   M    + P+ F+ +S L AC ++    +G Q+HG  IK     I+C    V +
Sbjct: 333 AIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC----VGN 388

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SLI+MY++ G    A   F  + +K+++ +N+      +  +S E+ N  H++    +  
Sbjct: 389 SLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGA 446

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
              T+   +   + IG + KG+ +H  ++  G   ++ I+ AL  MY+KCG+ + A +VF
Sbjct: 447 SPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVF 506

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           + M  RNV++W+++I  +  HG    A  LF +ML+ G+KPNEVT++ +L ACSH G ++
Sbjct: 507 NDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLID 566

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           E   +FN+M     + P ++HYACMVDLL RSG +  A + I+SMPF A+  +W   L  
Sbjct: 567 EAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGS 626

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+H+   + +   K++     +D   Y LLSN+YA EG WD+   +R  M+   L K  
Sbjct: 627 CRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKET 686

Query: 737 GYSTI 741
           GYS I
Sbjct: 687 GYSWI 691



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 294/610 (48%), Gaps = 28/610 (4%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF--KE 57
           L ++C    NL     LH  L+ +GL  D      LI  Y++ G   ++  +F      +
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYP------SVLRACSSLGDL 111
            D   W+ +I C+  N+    ++L +  M++      N IYP      ++LR+CS+    
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQ---CSRNIIYPNEYCFTALLRSCSNPLFF 161

Query: 112 GSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGC-LDDARKVFDKMTSRDVVSWSSIIA 169
            +G  +   ++K G FD    +  +++  + + G  +  AR VFDKM  +++V+W+ +I 
Sbjct: 162 TTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMIT 221

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
            Y     + + + +F  ++     PD  T+ SL  AC EL      + +H  V+R  +  
Sbjct: 222 RYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLAS 281

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           D  +G + + MY+K   + ++ + F  +      SWTA+IS Y +S   Q+A++ F  ML
Sbjct: 282 DVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNML 341

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
                PN  T  +VL +CA L     GK +H Q I+ G+    + +G +LI  YA  G M
Sbjct: 342 HGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLST-INCVGNSLINMYARSGTM 400

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
               K  + + E+N++S+N      A+   S E+    V+    G  P  F+ A  LS  
Sbjct: 401 ECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASP--FTYACLLSGA 458

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
             +G++  G QIH  ++K        + ++LI MYSKCG K  A  +F  +  ++V+ W 
Sbjct: 459 ACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWT 518

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           S+I GF ++G + +A+ LF++M    ++ +EVT++  + ACS++G +++  W H   + Y
Sbjct: 519 SIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEA-WKHFNSMHY 577

Query: 529 G----VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLND 583
                 R + Y    + D+  + G L  A    +SM  + + + W   +    +H     
Sbjct: 578 NHSISPRMEHY--ACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKL 635

Query: 584 AASLFKQMLD 593
                K++L+
Sbjct: 636 GEHAAKKILE 645


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 190/544 (34%), Positives = 318/544 (58%), Gaps = 4/544 (0%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           S A    +L  L+P + IH  ++   +  +  L NS +  Y  CG L  A++ F     +
Sbjct: 26  SHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCK 85

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
              SWT +IS   ++  F +A++ F +M     +PN +T+ +VL + A LG +R  KSVH
Sbjct: 86  NVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVH 145

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
           C  +R G      ++  AL++ Y++ G M    ++  ++ ERN++SWN ++S Y+  G S
Sbjct: 146 CFWVRGGFEGNV-FVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFS 204

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSL 439
           +EA++L   M+  GL+ D +++ S + A  +VG LQ+G  IHG +I+   + D+ ++++L
Sbjct: 205 EEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTAL 264

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMD 498
           +D+Y      + A+ +F  +  K V  W  M+ GF    +   AI  F++M  +  L++D
Sbjct: 265 MDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
            +  +  + +CS+ G L++G+ VH   I      +I++ +A+ DMYA CG+L+ A+R F 
Sbjct: 325 SIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFY 384

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M E++VV W+AMI   GM+G   DA  LF QM  SG+ P+E TF+++L+ACSH+G V E
Sbjct: 385 GMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE 444

Query: 619 G-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           G + +++ ++     P+LQHYAC++D+L R+G ++ A+  I++MPF  +  ++  LL  C
Sbjct: 445 GLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGAC 504

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           RIH  I +   I +++     ND GYY LLSN+YA  GNW+     R+ +    LKK PG
Sbjct: 505 RIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPG 564

Query: 738 YSTI 741
           +S+I
Sbjct: 565 FSSI 568



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 265/500 (53%), Gaps = 9/500 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           + R   +L+ L ++HA ++ +GL ++   S  L+ +Y   G L  ++ +F      +   
Sbjct: 30  ILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVS 89

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W +LI     N+ F E+I ++ +M       +     SVL A ++LG +   + VH   +
Sbjct: 90  WTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWV 149

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + GF+ +  ++T+++  Y +FGC+  AR++F+ M+ R+VVSW++I++ Y D+    E + 
Sbjct: 150 RGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAID 209

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F+ M R+G+  DF T++SL  A   +  L+    IHG ++R   + D  +  + + +Y 
Sbjct: 210 LFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYV 269

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLI 301
               +  A R F ++  +   +WT M++ ++    + +A++ F KML ++  + + I L+
Sbjct: 270 SHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLM 329

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            +L SC+  G L++G+ VH   I+        ++G A+I+ YA CG + + ++  + +GE
Sbjct: 330 GILSSCSHSGALQQGRRVHALAIKTCFANNI-FVGSAVIDMYANCGNLEDAKRFFYGMGE 388

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++++ WN +I+     G   +A++L +QM+  GL PD  +  S L AC + G +  GLQI
Sbjct: 389 KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQI 448

Query: 422 HGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNG 478
             H++K       +Q  + +ID+  + G  + AY     +  Q    ++++++     +G
Sbjct: 449 FYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508

Query: 479 NSLEAINLFHQMYLNCLEMD 498
           N    I L H++     EM+
Sbjct: 509 N----IKLGHEISQKIFEME 524



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 207/448 (46%), Gaps = 35/448 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P F +   +R    +H   +  G   +    T L++ Y++ G +  +R +F++  E + 
Sbjct: 129 LPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNV 188

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  Y  + F EE+I L++ M R+   +  +   S++ A  S+G L  G  +HG 
Sbjct: 189 VSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGF 248

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           II+ G++ D  I+T+++  Y    C+DDA +VF +M  +DV +W+ ++  +         
Sbjct: 249 IIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRA 308

Query: 181 LKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           +K F+ M+  + ++ D + ++ +  +C    +L+  R +H   ++     +  +G++ I 
Sbjct: 309 IKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVID 368

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+ CG+L  A+R F  + ++    W AMI+    +G+   A++ F++M     +P+  T
Sbjct: 369 MYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDEST 428

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++VL +C+  G + EG  +   ++                             K  H I
Sbjct: 429 FVSVLYACSHAGMVYEGLQIFYHMV-----------------------------KTSHDI 459

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              N+  +  +I    R G    A   +  M      PD    ++ L AC   G+++LG 
Sbjct: 460 --PNLQHYACVIDILGRAGQLDAAYSFINNMP---FQPDFDVYSTLLGACRIHGNIKLGH 514

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
           +I   + +++  D      L +MY+  G
Sbjct: 515 EISQKIFEMEPNDAGYYVLLSNMYALAG 542



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 145/286 (50%), Gaps = 5/286 (1%)

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKN 450
           T  L P + S AS L    ++  LQ   QIH  +I      + F+ +SL++ Y  CG   
Sbjct: 17  TQRLCPLAQSHASILRKLKDLKPLQ---QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLA 73

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F     K+VV W  +I G  +N   +EAI++F +M +   + + VT  + + A +
Sbjct: 74  DAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFA 133

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           N+G +   K VH   +  G   +++++TAL DMY+K G +  A+++F+SMSERNVVSW+A
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNA 193

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           ++  Y  HG   +A  LF  M   G+  +  T M+++ A    G ++ G      +   G
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            E D      ++D+      ++ A ++   M F  + + W  +L G
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEM-FVKDVAAWTLMLTG 298


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 209/733 (28%), Positives = 364/733 (49%), Gaps = 29/733 (3%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           RS +  R+  ++H  +  +GL  D   ST ++  Y   G +  SR VF+   + +   W 
Sbjct: 185 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 244

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            L+  Y      EE I +Y                          D   G ++ G+++K 
Sbjct: 245 SLMVGYSDKGEPEEVIDIYK-------------------------DESLGRQIIGQVVKS 279

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G +    ++ S++   G  G +D A  +FD+M+ RD +SW+SI A+Y  N  + E  ++F
Sbjct: 280 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 339

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M R   E +  T+ +L    G +   +  R IHG V++        + N+ + MY+  
Sbjct: 340 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 399

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G  + A   F ++  +   SW ++++ +   G    AL     M+   +  N +T  + L
Sbjct: 400 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 459

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C    +  +G+ +H  ++  G+      +G AL+  Y + G+MSE  +V+  +  R++
Sbjct: 460 AACFTPDFFEKGRILHGLVVVSGLFYN-QIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 518

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHG 423
           ++WN LI  YA      +AL     M+  G+  +  +V S LSAC   G L + G  +H 
Sbjct: 519 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 578

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +++    + DE V++SLI MY+KCG  + +  LF  +  ++++ WN+M+     +G+  E
Sbjct: 579 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 638

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
            + L  +M    + +D+ +F   + A + +  LE+G+ +H   +  G   D +I  A  D
Sbjct: 639 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 698

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG++    ++      R++ SW+ +I   G HG   +  + F +ML+ GIKP  VT
Sbjct: 699 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 758

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L ACSH G V++G  Y++ + R FG+EP ++H  C++DLL RSG +  A   I  M
Sbjct: 759 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 818

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   N  +W +LL  C+IH  +D  +   + LS     D+  Y L SN++A  G W++  
Sbjct: 819 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 878

Query: 722 KVRSIMEVTGLKK 734
            VR  M    +KK
Sbjct: 879 NVRKQMGFKNIKK 891



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 169/654 (25%), Positives = 313/654 (47%), Gaps = 34/654 (5%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           +  LI  Y + G ++ +R +FD     +   W  ++   +    + E +  + KM     
Sbjct: 110 TNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGI 169

Query: 92  TISNFIYPSVLRACSSLGDL-GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
             S+F+  S++ AC   G +   G +VHG + K G   D  + T+IL  YG +G +  +R
Sbjct: 170 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 229

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           KVF++M  R+VVSW+S++  Y D                   EP+ V  +   E+ G   
Sbjct: 230 KVFEEMPDRNVVSWTSLMVGYSDKG-----------------EPEEVIDIYKDESLG--- 269

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
                R I G V++  ++    + NS I M    G++  A   F ++ +R T SW ++ +
Sbjct: 270 -----RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 324

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y ++G  +++   F  M    +E N  T+ T+L     +   + G+ +H  +++ G   
Sbjct: 325 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF-D 383

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               +   L+  YA  G+  E   V   +  ++++SWN L++ +   G S +AL LL  M
Sbjct: 384 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 443

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFK 449
            + G   +  +  S+L+AC      + G  +HG V+      ++ + ++L+ MY K G  
Sbjct: 444 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 503

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + +  +  ++ ++ VV WN++I G+ ++ +  +A+  F  M +  +  + +T ++ + AC
Sbjct: 504 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563

Query: 510 SNIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
              G  LE+GK +H  ++S G   D ++  +L  MYAKCGDL ++Q +F+ +  RN+++W
Sbjct: 564 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 623

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +AM+     HG   +   L  +M   G+  ++ +F   L A +    +EEG+        
Sbjct: 624 NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK 683

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI--WGALLNGCRIH 680
            G E D   +    D+ S+ G+I    KM   +P   N S+  W  L++    H
Sbjct: 684 LGFEHDSFIFNAAADMYSKCGEIGEVVKM---LPPSVNRSLPSWNILISALGRH 734



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 279/584 (47%), Gaps = 33/584 (5%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
           +G  VH   +K G  +  V+ T+ L   Y +FG +  AR +FD M  R+ VSW+++++  
Sbjct: 90  TGRAVHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGI 148

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL-RPARSIHGHVLRRKIKID 230
                  EG++ F  M   G++P    + SL  ACG   S+ R    +HG V +  +  D
Sbjct: 149 VRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD 208

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             +  + + +Y   G +  + + F ++  R   SWT+++  Y+  G  ++ ++ +     
Sbjct: 209 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY----- 263

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
            K+E                     G+ +  Q+++ G+  +   +  +LI      G + 
Sbjct: 264 -KDES-------------------LGRQIIGQVVKSGLESKL-AVENSLISMLGSMGNVD 302

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               +   + ER+ +SWN + + YA+ G  +E+  +   M+ +    +S +V++ LS  G
Sbjct: 303 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 362

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           +V   + G  IHG V+K+       V ++L+ MY+  G    A L+F+++  K ++ WNS
Sbjct: 363 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 422

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           ++  F  +G SL+A+ L   M  +   ++ VTF +A+ AC      EKG+ +H  ++  G
Sbjct: 423 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 482

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +  +  I  AL  MY K G++  ++RV   M  R+VV+W+A+I  Y      + A + F+
Sbjct: 483 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 542

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGS-VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
            M   G+  N +T +++L AC   G  +E GK     +   G E D      ++ + ++ 
Sbjct: 543 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 602

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEK 691
           GD+  +  + + +    N   W A+L     H    +V+K + K
Sbjct: 603 GDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 645


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 216/712 (30%), Positives = 366/712 (51%), Gaps = 7/712 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++ +Y  +G L  +R +F     P+   W V+I  +    F EE+I  + ++ +     +
Sbjct: 249 VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
                SVL A +SL  L  G  VH +  K G D +  + ++++  Y +   +D A++VF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            +  R++V W++++  +  N    E ++ F  M R G +PD  T  S+  AC  L  L  
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              +H  +++ K   +  + N+ + MY+K G L  A + F  ++     SW A+I  Y +
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
             +  +A   F +M+     P+ ++L +++ +CA +  L+ G+  HC +++ G+      
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTS-TC 547

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
            G +LI+ Y +CG +     V +++  RN++S N LI+ Y   G  +EA+ L  ++Q  G
Sbjct: 548 AGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVG 606

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLA 452
           L P   + A  L  C     L LG QIHG V+K       E V  SL+ +Y        +
Sbjct: 607 LKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDS 666

Query: 453 YLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             LF  +Q  K +V+W ++I G+ Q  +  +A+  +  M  + +  D+  F + ++AC+ 
Sbjct: 667 ETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAG 726

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSA 570
           +  L+ G+ +H  +   G   D    ++L DMYAKCGD++ + +VF  M  R NV+SW++
Sbjct: 727 MSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNS 786

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI     +G   +A  +FKQM    I P+EVTF+ +L ACSH+G V EG+  F+ M   +
Sbjct: 787 MIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNY 846

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            ++P + H  CMVD+L R G +  A + I+ +   A+  +W  LL  CR H      K  
Sbjct: 847 KLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRA 906

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             +L       +  Y LLS+IYAE  NW     +R  M++ G+KK+PGYS I
Sbjct: 907 ADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWI 958



 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 184/613 (30%), Positives = 305/613 (49%), Gaps = 45/613 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+  L  G+         +++ Y + G++  ++  F   ++ D F W  ++  Y+ +  
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F   +  +  M   +   + F +  VL ACS L D+  G +VH  + K GF      Q  
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +   L DAR VFD   + D VSW+++IA Y  +    E +K+F  M R G  PD
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T++++  A                                   Y   G L  A + F 
Sbjct: 243 QITLVTVVNA-----------------------------------YVALGRLADARKLFT 267

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +I      +W  MIS + + G+ ++A+  F+++ +   +    +L +VL + A L  L  
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  VH Q  ++G+     Y+G AL+  YA+C KM   ++V +++GERNI+ WN ++  +A
Sbjct: 328 GSMVHAQATKEGLDDNV-YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFA 386

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEF 434
           + G+++E +E    M+  G  PD F+  S  SAC ++  L  G Q+H  +IK     + F
Sbjct: 387 QNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLF 446

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V ++L+DMY+K G    A   FE ++    V WN++I G+ Q   + EA  +F +M  N 
Sbjct: 447 VANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNG 506

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  DEV+  + + AC+N+ +L++G+  H  L+  G+       ++L DMY KCG +  A+
Sbjct: 507 VLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAAR 566

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            VF SM  RNVVS +A+I  Y M G L +A  LF+++   G+KP EVTF  +L  C    
Sbjct: 567 DVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGC---- 621

Query: 615 SVEEGKFYFNAMR 627
              +G F  N  R
Sbjct: 622 ---DGAFMLNLGR 631



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 169/700 (24%), Positives = 328/700 (46%), Gaps = 47/700 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C+ L+ +    ++H  +  TG  +       LI+ YA+   LR +RLVFD     D
Sbjct: 148 VLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLD 207

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  LI  Y+ + F  E++                                   KV  
Sbjct: 208 TVSWTALIAGYVRDGFPMEAV-----------------------------------KVFD 232

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+ + G   D +   +++  Y   G L DARK+F ++ + +VV+W+ +I+ +       E
Sbjct: 233 RMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  + + G++    ++ S+  A   L  L     +H    +  +  +  +G++ + 
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVN 352

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KC  + +A++ F  + +R    W AM+  + ++G  Q+ +E F  M     +P+  T
Sbjct: 353 MYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFT 412

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++  +CA L +L  G  +H  +I+        ++  AL++ YA+ G + E  K    +
Sbjct: 413 FTSIFSACASLHYLNFGGQLHTVMIKNKFASNL-FVANALVDMYAKSGALKEARKQFELM 471

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              + +SWN +I  Y ++  + EA  +  +M + G++PD  S+AS +SAC NV  L+ G 
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H  ++K+         SSLIDMY KCG    A  +F  +  ++VV  N++I G Y  G
Sbjct: 532 QCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG-YTMG 590

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYID 537
           +  EAI+LF ++ +  L+  EVTF   +  C     L  G+ +H +++ +G +     + 
Sbjct: 591 HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +L  +Y        ++ +F  +   + +V W+A+I  Y        A   ++ M    I
Sbjct: 651 VSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNI 710

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            P++  F ++L AC+   S++ G+   + +   G   D    + ++D+ ++ GD++G+ +
Sbjct: 711 LPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQ 770

Query: 657 MIHSMPFPANGSIWGALLNGCR----IHKRIDVMKTIEKE 692
           +   MP   N   W +++ G        + +++ K +E++
Sbjct: 771 VFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQ 810



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 283/569 (49%), Gaps = 6/569 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA     GL  +    + L+  YA+   + +++ VF++  E +  +W  ++  +  N  
Sbjct: 331 VHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL 390

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E +  +  M R       F + S+  AC+SL  L  G ++H  +IK  F  +  +  +
Sbjct: 391 AQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANA 450

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L +ARK F+ M   D VSW++II  Y       E   MF  MV  GV PD
Sbjct: 451 LVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            V++ S+  AC  +  L+  +  H  +++  +      G+S I MY KCG +L+A   F 
Sbjct: 511 EVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   S  A+I+ Y   G  ++A+  F ++  V  +P  +T   +L  C G   L  
Sbjct: 571 SMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEY 374
           G+ +H Q+++ G     + +  +L+  Y    +  + E +   +   + ++ W  LIS Y
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGY 689

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
           A++   ++AL+    M++  ++PD  + AS L AC  + SLQ G +IH  +       DE
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDE 749

Query: 434 FVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              SSLIDMY+KCG  K    +  E  ++ +V+ WNSMI G  +NG + EA+ +F QM  
Sbjct: 750 VTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQ 809

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQ 551
             +  DEVTFL  + ACS+ G++ +G+ V   ++ +Y ++  +     + D+  + G L 
Sbjct: 810 QSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLN 869

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHG 579
            A+   + +  + + + WS ++     HG
Sbjct: 870 EAEEFINKLGCKADPMLWSTLLGACRKHG 898



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 276/556 (49%), Gaps = 37/556 (6%)

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           L  L + + +H + +K G     ++   I+  Y + G +D A+K F ++  +DV +W+S+
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           ++ Y D+   +  ++ F  M    V P+  T   +  AC  L  +   R +H  V +   
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
                     I MY+KC  L  A   F       T SWTA+I+ Y R G+  +A++ F +
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M  V   P+ ITL+TV+ +   LG                                    
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALG------------------------------------ 257

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
           ++++  K+   I   N+++WN++IS +A++G ++EA+   ++++  GL     S+ S LS
Sbjct: 258 RLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLS 317

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           A  ++  L  G  +H    K    D  +V S+L++MY+KC   + A  +F  + ++++V+
Sbjct: 318 AIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVL 377

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WN+M+ GF QNG + E +  F  M  +  + DE TF +   AC+++  L  G  +H  +I
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMI 437

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
                 ++++  AL DMYAK G L+ A++ F+ M   + VSW+A+I  Y      ++A  
Sbjct: 438 KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFF 497

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
           +F++M+ +G+ P+EV+  +I+ AC++   ++ G+     +   G++      + ++D+  
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYV 557

Query: 647 RSGDIEGAFKMIHSMP 662
           + G +  A  + +SMP
Sbjct: 558 KCGVVLAARDVFYSMP 573



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 222/468 (47%), Gaps = 36/468 (7%)

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           L +L  A+ IH   L+  + + G LGN  + +Y KCG++  A++ F ++EK+   +W ++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           +S Y   G F   ++SFV M   +  PN  T   VL +C+GL  +  G+ VHC + + G 
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
           G    +    LI+ YA+C  + +   V       + +SW  LI+ Y R G   EA+++  
Sbjct: 174 GFR-SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
           +MQ  G  PD  ++                                   ++++ Y   G 
Sbjct: 233 RMQRVGHAPDQITLV----------------------------------TVVNAYVALGR 258

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  LF +I   +VV WN MI G  + G + EAI+ F ++    L+    +  + + A
Sbjct: 259 LADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
            +++  L  G  VH +    G+  ++Y+ +AL +MYAKC  +  A++VF+S+ ERN+V W
Sbjct: 319 IASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLW 378

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +AM+  +  +G   +    F  M   G +P+E TF +I  AC+    +  G      M  
Sbjct: 379 NAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK 438

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                +L     +VD+ ++SG ++ A K    M    N S W A++ G
Sbjct: 439 NKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVS-WNAIIVG 485



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 9/308 (2%)

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IH   +KI       + + ++D+Y KCG  + A   F R+++K V  WNS++  +  +G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
               +  F  M+ + +  +E TF   + ACS +  +  G+ VH  +   G     +    
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L DMYAKC  L+ A+ VFD     + VSW+A+I  Y   G   +A  +F +M   G  P+
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FK 656
           ++T + ++ A    G + + +  F  +      P++  +  M+   ++ G  E A   F 
Sbjct: 243 QITLVTVVNAYVALGRLADARKLFTQIP----NPNVVAWNVMISGHAKRGFAEEAISFFL 298

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEG 715
            +      A  S  G++L+       ++    +  + +  G +DN Y  + L N+YA+  
Sbjct: 299 ELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCS 358

Query: 716 NWDEFGKV 723
             D   +V
Sbjct: 359 KMDAAKQV 366



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 6/184 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  +  L     +H+ +  TG + D    + LI+ YA+ G ++ S  VF      +
Sbjct: 720 VLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRN 779

Query: 60  SFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + + W  +I     N + EE++ ++ +M ++        +  VL ACS  G +  G KV 
Sbjct: 780 NVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVF 839

Query: 119 GRIIKCGFDKDDVIQTSILC-TYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNAD 176
             ++     +  V     +    G +G L++A +  +K+  + D + WS+++ +   + D
Sbjct: 840 DLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGD 899

Query: 177 VSEG 180
              G
Sbjct: 900 EVRG 903


>gi|414585599|tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
          Length = 829

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 221/702 (31%), Positives = 373/702 (53%), Gaps = 27/702 (3%)

Query: 63  WAVLIKCYMWNNFFEESILLY---HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  L+  Y+     E ++ LY   +   R      ++ Y   L AC+    L  G+ VH 
Sbjct: 101 YNALLIAYVARALPEHALRLYALLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVHA 160

Query: 120 RIIKCGFDKDD--VIQTSILCTYGEF------GCLDDARKVFDKMTSRDVVSWSSIIASY 171
            +++      D  V++ S+L  Y         G +D  R++FD M  R+ VSW+++   Y
Sbjct: 161 HLLRRARSLPDTAVLRNSLLNVYASCVRYRGDGSVDVVRRLFDAMPKRNAVSWNTLFGWY 220

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS--IHGHVLRRKIKI 229
                  E L+MF  M+ +G++P  V+ +++  A  +     P+ S  ++G +++  ++ 
Sbjct: 221 VKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVAKE---DPSWSFVLYGLLVKHGMEY 277

Query: 230 --DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
             D  + +S IVM+S+ GD+ SA R F    K+ T  W  MI+ Y ++G F +A+   ++
Sbjct: 278 VNDLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTEVWNTMITGYVQNGKFAEAMGLVIR 337

Query: 288 MLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAE 345
           ++  KE P +++T ++ L + +     R G+ +H  +I KGM       LG AL+  Y+ 
Sbjct: 338 LMVSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLI-KGMHTTLPVILGNALVVMYSR 396

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           CG +    ++   + E++I+SWN +I+ + +     E L L+ QMQ  G   D  ++ + 
Sbjct: 397 CGNVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAV 456

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKS 463
           LSA  N G L +G Q H ++I+   + E ++S LIDMY+K G   +A  +F+     ++ 
Sbjct: 457 LSAASNTGDLHIGKQAHSYLIRHGIEGEGLESYLIDMYAKSGRIEIAQRVFDDYGNAKRD 516

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ-LEKGKWVH 522
            V WN+MI G+ Q G+  +AI  F  M   CLE   VT  + + AC  +G  L  GK +H
Sbjct: 517 EVTWNAMIAGYTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLGGGLCAGKQIH 576

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
              +   +  ++++ TAL DMY+KCG++ TA+ VF  M+E++ VS++ MI   G HG   
Sbjct: 577 CFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFGK 636

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
            A SLF  M + G+KP+ VTF+  + AC++SG V+EG   + +M  FGV    QH  C+V
Sbjct: 637 SALSLFYSMQEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVVVTPQHRCCIV 696

Query: 643 DLLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN-- 699
           D+L+++G +E A++ +  +    +  SIWG LL  C+   + +++  + + L        
Sbjct: 697 DMLAKAGRVEEAYEFVQELGEEGDFVSIWGTLLASCKAQDKQELVNLVTERLICIEKKYG 756

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             GY  LLS+I+A EGNW     +R  M + GL K+ G S I
Sbjct: 757 HAGYSVLLSHIFAAEGNWSSADSLRKEMRLRGLSKMAGSSWI 798



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 191/370 (51%), Gaps = 20/370 (5%)

Query: 15  RLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +LH +L + G+H   P      L+  Y+  G+++++  +FD   E D   W  +I  ++ 
Sbjct: 369 QLHGYL-IKGMHTTLPVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQ 427

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           N+F  E +LL ++M +           +VL A S+ GDL  G++ H  +I+ G + +  +
Sbjct: 428 NDFDLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHGIEGEG-L 486

Query: 133 QTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           ++ ++  Y + G ++ A++VFD      RD V+W+++IA Y       + +  F +M+  
Sbjct: 487 ESYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEA 546

Query: 191 GVEPDFVTMLSLAEAC----GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
            +EP  VT+ S+  AC    G LC+    + IH   LRR +  +  +G + + MYSKCG+
Sbjct: 547 CLEPTSVTLASVLPACDPLGGGLCA---GKQIHCFALRRCLDTNVFVGTALVDMYSKCGE 603

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + +AE  F  + ++ T S+T MIS   + G+ + AL  F  M E   +P+ +T +  + +
Sbjct: 604 ISTAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQEKGLKPDGVTFLAAISA 663

Query: 307 CAGLGWLREGKSVHCQIIRKG--MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN- 363
           C   G + EG +++  +   G  + P++      +++  A+ G++ E  + +  +GE   
Sbjct: 664 CNYSGLVDEGLALYRSMETFGVVVTPQHRC---CIVDMLAKAGRVEEAYEFVQELGEEGD 720

Query: 364 -ILSWNMLIS 372
            +  W  L++
Sbjct: 721 FVSIWGTLLA 730


>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 219/653 (33%), Positives = 345/653 (52%), Gaps = 15/653 (2%)

Query: 73  NNFFEESILLYHKMIREQA---TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              F E+I  +  + ++     T+S + Y  ++ ACS L  L  G K+H  ++K     D
Sbjct: 40  QKLFNEAIKAFEFLQKKTGFCLTLSTYAY--LISACSYLRSLEHGRKIHDHMLKSKSHPD 97

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +Q  IL  YG+ G L DA+KVFD M  R+VVSW+S+IA Y  N      L+ +  M++
Sbjct: 98  LTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQ 157

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            GV PD  T  S+ +AC  L  +   R +H HVL+ +        N+ I MY+K   ++ 
Sbjct: 158 SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIID 217

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCA 308
           A   F ++  R   SW +MI+ +++ G+  +AL  F +ML      PN     +V  +C+
Sbjct: 218 ALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L     G+ +H   I+ G+G +  + G +L + YA+CG +S    V + IG  ++++WN
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDV-FAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWN 336

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I+ +A  G +KEA+    QM+  GL+PD  +V S L AC +   L  G+Q+HG++ K+
Sbjct: 337 AIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKM 396

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINL 486
               D  V ++L+ MY+KC     A   FE ++    +V WN+++     +  + E   L
Sbjct: 397 GLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGL 456

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
              M ++    D +T    + A +    +E G  VH   +  G+  DI +   L D+YAK
Sbjct: 457 LKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAK 516

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG L+TA+++FDS+   +VVSWS++I  Y   G   +A  LFK M    +KPN VTF+ +
Sbjct: 517 CGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGV 576

Query: 607 LWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSH G VEEG + Y    + FG+ P  +H +CMVDLL+R+G +  A   IH M F  
Sbjct: 577 LTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDP 636

Query: 666 NGSIWGALLNGCR-IHK---RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           +  +W  LL  C+ +H+   R   +K  +K+  V  T   G +  +  I  EE
Sbjct: 637 DIVVWKTLLAACKSVHQALARRTNLKVWKKQHEVI-TLVKGKFVYVKQIDREE 688



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/598 (27%), Positives = 293/598 (48%), Gaps = 18/598 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ LR L    ++H H+L +  H D      ++  Y + GSL+ ++ VFD   E +
Sbjct: 69  LISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERN 128

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  N     ++  Y +M++       F + S+++ACSSLGD+G G ++H 
Sbjct: 129 VVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHA 188

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K  F    + Q +++  Y +   + DA  VF +M +RD++SW S+IA +       E
Sbjct: 189 HVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELE 248

Query: 180 GLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L  F  M+ +GV  P+     S+  AC  L      R +HG  ++  +  D   G S  
Sbjct: 249 ALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC 308

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG L  A   F +I +    +W A+I+ +   G  ++A+  F +M      P+ I
Sbjct: 309 DMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEI 368

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ ++L +C     L +G  VH  I + G+  +       L+  YA+C   SE    I  
Sbjct: 369 TVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCN-TLLTMYAKC---SELRDAIFF 424

Query: 359 IGE----RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
             E     +++SWN +++       ++E   LL  M      PD  ++ + L A     S
Sbjct: 425 FEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVS 484

Query: 415 LQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           +++G Q+H + +K  ++C D  V + LID+Y+KCG    A  +F+ +    VV W+S+I 
Sbjct: 485 IEIGNQVHCYALKTGLNC-DISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLIL 543

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVR 531
           G+ Q G   EA+ LF  M    ++ + VTF+  + ACS++G +E+G  ++  +   +G+ 
Sbjct: 544 GYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIV 603

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI-DCYGMHGQLNDAASL 587
                 + + D+ A+ G L  A+     M+ + ++V W  ++  C  +H  L    +L
Sbjct: 604 PTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACKSVHQALARRTNL 661


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 211/651 (32%), Positives = 347/651 (53%), Gaps = 21/651 (3%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCG--FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
           +L+ C + GD  +G  VH R+++ G     D      +L  Y + G L  AR++FD M  
Sbjct: 53  LLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPE 112

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD------FVTMLSLAEACGELCSL 212
           R++VS+ +++  Y       E   +F  + REG E +       + +L   +A G  C +
Sbjct: 113 RNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCI 172

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                  GH        +  +G+S I  YS CG +  A   F  I  +   +WTAM+SCY
Sbjct: 173 HACACKLGH------DRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCY 226

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-CQIIRKGMGPE 331
           + +   + AL +F KM     +PN   L +VL +   L     GK +H C +  K +   
Sbjct: 227 SENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAV--KTLCDT 284

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             ++G AL++ YA+CG + +   V   I   +++ W+ LIS YA+   +++A E+ ++M 
Sbjct: 285 EPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMM 344

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKN 450
              ++P+ FS++  L AC NV  L LG QIH  VIK+  + E FV ++L+D+Y+KC    
Sbjct: 345 RSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNME 404

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            +  +F  ++  + V WN++I G+ Q+G + +A+++F +M    +   +VTF + ++AC+
Sbjct: 405 NSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACA 464

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           N   ++    +H  +       D  +  +L D YAKCG ++ A +VF+S+ + +VVSW+A
Sbjct: 465 NTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNA 524

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-F 629
           +I  Y +HG+  DA  LF +M  S  KPN+VTF+ +L  C  +G V +G   FN+M +  
Sbjct: 525 IISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDH 584

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK-T 688
            ++P + HY C+V LL R+G +  A K I  +P   +  +W ALL+ C +HK + + K +
Sbjct: 585 RIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFS 644

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            EK L +    D   Y LLSN+YA  G  D+   +R  M   G+KK  G S
Sbjct: 645 AEKVLEIE-PQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLS 694



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 169/650 (26%), Positives = 320/650 (49%), Gaps = 40/650 (6%)

Query: 16  LHAHLLVTG--LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +HA ++  G     D   +  L+  YA++G L ++R +FD   E +   +  L++ Y   
Sbjct: 69  VHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALR 128

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             FEE+  L+ ++ RE   +++F+  ++L+   ++   G    +H    K G D++  + 
Sbjct: 129 GGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVG 188

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           +S++  Y   G +  AR VFD +  +D V+W+++++ Y +N    + L  F  M   G +
Sbjct: 189 SSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAK 248

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+   + S+ +A   L S    + IHG  ++     +  +G + + MY+KCG +  A   
Sbjct: 249 PNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTV 308

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I       W+ +IS Y +S   ++A E F++M+     PN  +L  VL +CA + +L
Sbjct: 309 FEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFL 368

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             G+ +H  +I+ G   E  ++G AL++ YA+C  M    ++  ++ + N +SWN +I  
Sbjct: 369 DLGQQIHNLVIKLGYESEL-FVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVG 427

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KD 432
           Y + G +++AL +  +M+   ++    + +S L AC N  S++  +QIH  + K     D
Sbjct: 428 YCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNND 487

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V +SLID Y+KCG    A  +FE I Q  VV WN++I G+  +G + +A+ LF++M  
Sbjct: 488 TIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNK 547

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           +  + ++VTF+  +  C + G + +G  + +                          +  
Sbjct: 548 SDTKPNDVTFVALLSVCGSTGLVNQGLSLFNS-------------------------MTM 582

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
             R+  SM       ++ ++   G  G+LNDA    K + D    P+ + +  +L +C  
Sbjct: 583 DHRIKPSMDH-----YTCIVRLLGRAGRLNDA---LKFIGDIPSTPSPMVWRALLSSCVV 634

Query: 613 SGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGAFKMIHSM 661
             +V  GK  F+A ++  +EP D   Y  + ++ + +G ++    +  SM
Sbjct: 635 HKNVALGK--FSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSM 682



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 112/208 (53%), Gaps = 3/208 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C N+  L    ++H  ++  G   +      L++ YA+  ++ +S  +F + ++ +
Sbjct: 358 VLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDAN 417

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  + F E+++ ++ +M       +   + SVLRAC++   +    ++H 
Sbjct: 418 EVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHS 477

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K  F+ D ++  S++ TY + GC+ DA KVF+ +   DVVSW++II+ Y  +   ++
Sbjct: 478 LIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATD 537

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACG 207
            L++F+ M +   +P+ VT ++L   CG
Sbjct: 538 ALELFNRMNKSDTKPNDVTFVALLSVCG 565



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 13/187 (6%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C N   ++   ++H+ +  +  + D      LI++YA+ G +R +  VF++  + D
Sbjct: 459 VLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCD 518

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +    +++ L+++M +     ++  + ++L  C S G +  G  +  
Sbjct: 519 VVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFN 578

Query: 120 RI-----IKCGFDKDDVIQTSILCTYGEFGCLDDARK-VFDKMTSRDVVSWSSIIASYFD 173
            +     IK   D      T I+   G  G L+DA K + D  ++   + W ++++S   
Sbjct: 579 SMTMDHRIKPSMDH----YTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVV 634

Query: 174 NADVSEG 180
           + +V+ G
Sbjct: 635 HKNVALG 641


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 215/728 (29%), Positives = 363/728 (49%), Gaps = 5/728 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA     GL  +    T L+  Y     +  ++ +F    E +   W  L+     N  
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE++  Y +M RE+   +   + +V+  C SL D  +G +V   +I  G  +   +  S
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV-EP 194
           ++   G  G + DA K+F +M  RD VSW+++++ Y      S+  ++F  M R G+   
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T+ SL   C     +     +H   LR  +    P+ N+ + MYS  G L  AE  F
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             + +R   SW  MIS Y ++G    AL++  ++L   E P+ +T  + LG+C+  G L 
Sbjct: 306 WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALM 365

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH   ++  +      +G +LI  Y +C  + + E++   +   +++S N+LI  Y
Sbjct: 366 DGRMVHAMTLQLSLHHNL-LVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSY 424

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-LGLQIHGHVIKID-CKD 432
           A      +A+++   M+   +  +  ++ + L +  +   L+  GL +H + I      D
Sbjct: 425 AVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSD 484

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           ++V +SLI MY+KCG    +  +F+RI  +SVV WN+MI    Q+G+  E++ LF  M  
Sbjct: 485 DYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRH 544

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           +   +D +     + + +++  LE+G  +H   +  G+  D ++  A  DMY KCG +  
Sbjct: 545 DGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDE 604

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
             ++    + R    W+ +I  Y  +G   +A   FK M+  G  P+ VTF+ +L ACSH
Sbjct: 605 MLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSH 664

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G V++G  Y+N+M  +FGV P ++H  C+VD+L R G    A K I  MP   N  IW 
Sbjct: 665 AGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWR 724

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL+  R HK +D+ +   K L      D+  Y LLSN+YA    W +  +VRS M+   
Sbjct: 725 SLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTIN 784

Query: 732 LKKVPGYS 739
           L K+P  S
Sbjct: 785 LNKIPACS 792



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 178/669 (26%), Positives = 308/669 (46%), Gaps = 24/669 (3%)

Query: 53  DTFKEPDSFMWAV--LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           D  + P S+  A+   ++C   +  F     +   M      +S F   S++ AC    +
Sbjct: 3   DDHRTPSSWYTAISGCVRCGRDSTAFS----MLRGMRERGVPLSGFALASLVTACERWEE 58

Query: 111 -LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
               G  +H    K G   +  I T++L  YG    + DA+++F +M  R+VVSW++++ 
Sbjct: 59  GRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMV 118

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
           +   N  + E L  +  M RE +  +     ++   CG L        +  HV+   ++ 
Sbjct: 119 ALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQR 178

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM- 288
              + NS I M    G +  AE+ F ++E+R T SW A++S Y+  G   K+   F  M 
Sbjct: 179 QVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMR 238

Query: 289 ---LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
              L   +   L +LI+V   CA   ++  G  VH   +R G+   Y  +  AL+  Y+ 
Sbjct: 239 RGGLLRHDATTLCSLISV---CASSDYVSYGSGVHSLCLRTGL-HSYIPVVNALVNMYSS 294

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
            GK+++ E +   +  R+++SWN +IS Y + G + +AL+ L Q+      PD  + +S+
Sbjct: 295 AGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSA 354

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           L AC + G+L  G  +H   +++       V +SLI MY KC     A  +F+ +    V
Sbjct: 355 LGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDV 414

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWVHH 523
           V  N +I  +    +  +A+ +F  M    ++++ +T +  + + ++   L   G  +H 
Sbjct: 415 VSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHA 474

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             I  G   D Y+  +L  MYAKCGDL+++  VF  +  R+VVSW+AMI     HG   +
Sbjct: 475 YTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEE 534

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
           +  LF  M   G   + +     + + +   S+EEG          G+  D       +D
Sbjct: 535 SLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMD 594

Query: 644 LLSRSGDIEGAFKMIHSMPFPA--NGSIWGALLNG-CRIHKRIDVMKTIEKELSVTGTND 700
           +  + G ++   KM   +P PA      W  L++G  R     +  +T +  +SV  T D
Sbjct: 595 MYGKCGKMDEMLKM---LPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPD 651

Query: 701 N-GYYTLLS 708
              + TLLS
Sbjct: 652 YVTFVTLLS 660



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 156/588 (26%), Positives = 272/588 (46%), Gaps = 14/588 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++ +H++V+GL      +  LI     +G +  +  +F   +E D+  W  L+  Y    
Sbjct: 166 QVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEG 225

Query: 75  FFEESILLYHKM-----IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              +S  ++  M     +R  AT       S++  C+S   +  G  VH   ++ G    
Sbjct: 226 LCSKSFRVFSDMRRGGLLRHDAT----TLCSLISVCASSDYVSYGSGVHSLCLRTGLHSY 281

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +  +++  Y   G L DA  +F  M+ RD++SW+++I+SY  N +  + LK    ++ 
Sbjct: 282 IPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLH 341

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
               PD +T  S   AC    +L   R +H   L+  +  +  +GNS I MY KC  +  
Sbjct: 342 TNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIED 401

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           AER F  +      S   +I  Y       KA++ F  M   + + N IT++ +LGS   
Sbjct: 402 AERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTS 461

Query: 310 LGWLRE-GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
              LR  G  +H   I  G   + DY+  +LI  YA+CG +     V   I  R+++SWN
Sbjct: 462 SNDLRNYGLPLHAYTIHAGFLSD-DYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWN 520

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I+   + G  +E+L+L + M+  G   D   +A  +S+  ++ SL+ G+Q+HG  +K 
Sbjct: 521 AMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKC 580

Query: 429 DC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               D  V ++ +DMY KCG  +    +      +    WN++I G+ + G   EA   F
Sbjct: 581 GLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETF 640

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAK 546
             M       D VTF+T + ACS+ G ++KG   ++ + S +GV   I     + D+  +
Sbjct: 641 KHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGR 700

Query: 547 CGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            G    A++  + M    N + W +++     H  L+      K++L+
Sbjct: 701 LGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLE 748


>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 194/589 (32%), Positives = 322/589 (54%), Gaps = 10/589 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  RD V W+++I  Y  N   S+  K+F  M+++G  P   T+++L   CG+   +   
Sbjct: 1   MPERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           RS+HG   +  +++D  + N+ I  YSKC +L SAE  F +++ + T SW  MI  Y++S
Sbjct: 61  RSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQS 120

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  ++A+  F  M E   E + +T+I +L +          + +HC +++ GM  +   +
Sbjct: 121 GLMEEAITVFKNMFEKSVEISPVTIINLLSAHV------SHEPLHCLVVKSGMVNDISVV 174

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             +L+  Y+ CG +   E++  +  + +I+    ++S YA KG    A+    +M+   +
Sbjct: 175 -TSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCM 233

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
             D+ ++   L  C N   + +G+ +HG+ IK   C+   V + LI MYSK         
Sbjct: 234 KIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLF 293

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIG 513
           LF+++Q+  ++ WNS+I G  Q+G +  A  +FHQM L+  L  D +T  + +  CS + 
Sbjct: 294 LFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLC 353

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  GK +H   +      + ++ TAL DMYAKCG+   A+ VF S+      +W++MI 
Sbjct: 354 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 413

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            Y + G  N A S + +M + G+KP+++TF+ +L AC+H G V+EGK YF AM + FG+ 
Sbjct: 414 GYSLSGLQNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEFGIS 473

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P LQHYA MV LL R+     A  +I  M    + ++WGALL+ C IH+ ++V + I K+
Sbjct: 474 PCLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYIAKK 533

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +    + G Y L+SN+YA E  WD+  +VR +M+  G     G S I
Sbjct: 534 MFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRKMMKDNGYDGYLGVSQI 582



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 217/480 (45%), Gaps = 21/480 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P    C  + +   +H     +GL  D      LI  Y++   L S+ ++F   K+  +
Sbjct: 48  LPFCGQCGFVSQGRSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKST 107

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  +   EE+I ++  M  +   IS     ++L A  S       E +H  
Sbjct: 108 VSWNTMIGAYSQSGLMEEAITVFKNMFEKSVEISPVTIINLLSAHVS------HEPLHCL 161

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K G   D  + TS++C Y   G LD A +++       +V  +SI++SY +  D+   
Sbjct: 162 VVKSGMVNDISVVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIA 221

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +  F  M +  ++ D V ++ +   C     +    S+HG+ ++  +     + N  I M
Sbjct: 222 VVYFSKMRQLCMKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITM 281

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLIT 299
           YSK  D+ +    F ++++    SW ++IS   +SG    A E F +M L     P+ IT
Sbjct: 282 YSKFDDVETVLFLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAIT 341

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++L  C+ L  L  GK +H   +R     E +++  ALI+ YA+CG   + E V  +I
Sbjct: 342 IASLLAGCSQLCCLNLGKELHGYTLRNNFENE-NFVCTALIDMYAKCGNEVQAESVFKSI 400

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                 +WN +IS Y+  G+   AL   ++M+  GL PD  +    LSAC + G +  G 
Sbjct: 401 KAPCTATWNSMISGYSLSGLQNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGK 460

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYS--------KCGFKNLAYLLFERIQQKSVVMWNSMI 471
                +IK     EF  S  +  Y+         C F    YL+++   +    +W +++
Sbjct: 461 IYFRAMIK-----EFGISPCLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 515


>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
 gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
          Length = 804

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 219/716 (30%), Positives = 380/716 (53%), Gaps = 23/716 (3%)

Query: 47  SSRLVFDTF-KEPDSFMWAVLIKCYMWNNFFEESILLY---HKMIREQATISNFIYPSVL 102
           + RL+ +   + P + +   L+  Y      EE++ LY   +   R      ++ Y + L
Sbjct: 53  ARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAAL 112

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSILCTYGEF-----GCLDDARKVFDK 155
            AC+    L  G  VH  +++      D  V++ S+L  Y          +D  R++FD 
Sbjct: 113 TACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDA 172

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  R+VVSW+++   Y       E L++F  M+ +G  P  V+ +++  A        P 
Sbjct: 173 MPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPF 232

Query: 216 RSIHGHVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           + ++G +++  ++   D  + +S I M+S+ GD+ SA R F +  K+ T  W  MI+ Y 
Sbjct: 233 Q-LYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYV 291

Query: 274 RSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           ++G F +A++ F K+L  +E P +++T ++ L + +    +  G+ +H  +I KGM    
Sbjct: 292 QNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI-KGMHRTL 350

Query: 333 DY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              LG AL+  Y+ CG +     +   + E++I++WN +++ + +     E L L+ +MQ
Sbjct: 351 PVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQ 410

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
             G   DS ++ + LSA  N G LQ+G Q HG++I+   + E ++S LIDMY+K G   +
Sbjct: 411 KSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLESYLIDMYAKSGRVEM 470

Query: 452 AYLLFERIQ--QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           A  +F+  +  ++  V WN+MI G+ Q+G   +AI +F  M    LE   VT  + + AC
Sbjct: 471 AQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 530

Query: 510 SNIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
             +G  +  GK +H   +   +  ++++ TAL DMY+KCG++ TA+ VF  M+ ++ V++
Sbjct: 531 DPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTY 590

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           + MI   G HG    A +LF  M + G+KP+ VTF++ + AC++SG V+EG   + +M  
Sbjct: 591 TTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDS 650

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIHKRIDVMK 687
           FG+    QH+ C+ DLL+++G +E A++ I  +    N  +IWG+LL  C+   + ++ K
Sbjct: 651 FGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAK 710

Query: 688 TIEKELSVTGTN--DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + K+L          GY  LLS + A E NW+    +R  M   GLKK  G S I
Sbjct: 711 LVTKKLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWI 766


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 215/706 (30%), Positives = 365/706 (51%), Gaps = 4/706 (0%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y + G L     VF      +   W +++   + N  FE  + +Y +MIR     + F  
Sbjct: 2   YTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFAL 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
             V +AC++LG    G  VH   +K G +K+  + +SIL  Y + G ++DA +VF+ M +
Sbjct: 62  GCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDN 121

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
             V  W+++I  Y   +   E LK+   M  +G+  D  T ++  + C  + +L   R I
Sbjct: 122 LVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQI 181

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG +++ ++     + NS + MY K G  L A + F +++ +   SW  + +  ++    
Sbjct: 182 HGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDA 241

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++    F K++    +PN +T   +   C     L  G   HC   R G+  E   +  +
Sbjct: 242 REIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEAS-VTSS 300

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI  ++ CG M     V  +   ++I + N +IS Y     + EAL L   +   GL  D
Sbjct: 301 LINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEAD 360

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFE 457
             + +S+L AC    + +LG Q+HG ++K     + +V SSL+  Y   G  + ++  F 
Sbjct: 361 ECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFN 420

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +++  +V W +MI      G S EAI L +++     + DE  F +    C+ I    +
Sbjct: 421 GVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQ 480

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYG 576
            K VH  ++  G    +++ +A+ D YAKCGD++ A+RVFD  S  R+V+ ++ M+  Y 
Sbjct: 481 TKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYA 540

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDL 635
            HG + +A   F++M  + ++P++ TF++++ ACSH G VE+G  +F +M + +G++P  
Sbjct: 541 HHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSP 600

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
            +Y C+VDL SR+G +E A  +I +MPFP   +IW +LLNGCRIH   ++ +   K+L  
Sbjct: 601 DNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQ 660

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               ++  Y LLS +Y+EEG+W +  KVR  M   GL K PG S I
Sbjct: 661 LVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWI 706



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 276/569 (48%), Gaps = 5/569 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   L  G+  +P   + ++  YA++G +  +  VF+         W  +I  Y   ++
Sbjct: 80  VHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSY 139

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             ES+ +   M  +  ++  F + + L+ C  +G+L  G ++HG II+        +  S
Sbjct: 140 GFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNS 199

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G    A KVFD++  +D++SW+++ A      D  E  + FH ++  G++P+
Sbjct: 200 LMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPN 259

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT   L   CGE   L      H    R  I  +  + +S I M+S+CG +  A   F 
Sbjct: 260 CVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFD 319

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
               +   +   MIS YN +    +AL  F  +  +  E +  T  + L +C      + 
Sbjct: 320 SAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKL 379

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H  I++ G   +  Y+  +L++ Y   G + +  +  + +   +++SW  +IS   
Sbjct: 380 GRQMHGTIVKSGFASQ-GYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALV 438

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
            KG S EA+ LL +++  G  PD F   S  + C  + + +    +H  V+K+  +   F
Sbjct: 439 HKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVF 498

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           V S++ID Y+KCG    A  +F++  + + V+++N+M+  +  +G   EA+  F +M L 
Sbjct: 499 VASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLA 558

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQT 552
            LE  + TF++ I ACS++G +E+G      + + YG+         L D++++ G L+ 
Sbjct: 559 TLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLED 618

Query: 553 AQRVFDSMSERNVVS-WSAMIDCYGMHGQ 580
           A+ + ++M      + W ++++   +HG 
Sbjct: 619 AKHIIETMPFPPWPAIWRSLLNGCRIHGN 647



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 201/382 (52%), Gaps = 2/382 (0%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG L    + F ++  +   SWT ++S   ++G F+  L  +++M+     PN   
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L  V  +CA LG    G  VHC  ++ GM  +  ++G +++  YA+ G + + E+V   +
Sbjct: 61  LGCVTKACAALGGKELGLCVHCFALKVGM-EKNPFVGSSILNMYAKLGDIEDAERVFECM 119

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
               +  WN +I  YA+     E+L+++  MQ  G+  D+F+  ++L  C  VG+L  G 
Sbjct: 120 DNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGR 179

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG +I+ +      V +SL+DMY K G    A  +F+R+Q K ++ WN++  G  Q  
Sbjct: 180 QIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGD 239

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           ++ E    FH++ L  L+ + VTF    + C     L  G   H     +G+  +  + +
Sbjct: 240 DAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTS 299

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           +L +M+++CG ++ A  VFDS   +++ + + MI  Y ++    +A +LF  +   G++ 
Sbjct: 300 SLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEA 359

Query: 599 NEVTFMNILWACSHSGSVEEGK 620
           +E TF + L AC  + + + G+
Sbjct: 360 DECTFSSALEACFRTENQKLGR 381



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/532 (22%), Positives = 233/532 (43%), Gaps = 12/532 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL    ++H  ++ + + +       L++ Y + G    +  VFD  ++ D   W  +  
Sbjct: 174 NLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFA 233

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
                +   E    +HK++      +   +  + R C    DL SG + H    + G   
Sbjct: 234 GLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISD 293

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  + +S++  +   G +  A  VFD    + + + + +I+ Y  N   +E L +F ++ 
Sbjct: 294 EASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLN 353

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G+E D  T  S  EAC    + +  R +HG +++      G + +S +  Y   G L 
Sbjct: 354 GLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLD 413

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            +   F  +E+    SW AMIS     G+  +A+    ++ E   +P+     ++   CA
Sbjct: 414 DSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCA 473

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSW 367
           G+   R+ KSVH  +++ G    + ++  A+I+ YA+CG +    +V       R+++ +
Sbjct: 474 GIAAYRQTKSVHSLVVKMGY-EAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILF 532

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++  YA  G+ +EA+E   +M+   L P   +  S +SAC ++G ++ G  I    + 
Sbjct: 533 NTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQG-DIFFKSMN 591

Query: 428 ID-----CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSL 481
           +D       D +    L+D++S+ GF   A  + E +       +W S++ G   +GN  
Sbjct: 592 LDYGMDPSPDNY--GCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNK- 648

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           E      +  L  +  ++  ++   +  S  G       V   +I  G+ KD
Sbjct: 649 ELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKD 700



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 99/204 (48%), Gaps = 2/204 (0%)

Query: 8   TNLRKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           T  +KL R +H  ++ +G        + L++ Y   G L  S   F+  +  D   W  +
Sbjct: 374 TENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAM 433

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I   +   +  E+I L +++         FI+ S+   C+ +      + VH  ++K G+
Sbjct: 434 ISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGY 493

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFH 185
           +    + ++++  Y + G +++AR+VFD+ +  RDV+ +++++ +Y  +  V E ++ F 
Sbjct: 494 EAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFE 553

Query: 186 SMVREGVEPDFVTMLSLAEACGEL 209
            M    +EP   T +S+  AC  L
Sbjct: 554 KMKLATLEPSQATFVSVISACSHL 577


>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
 gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 215/675 (31%), Positives = 352/675 (52%), Gaps = 6/675 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           + +K  R+H  +   GL  D    T L+E Y +   L S+R VFD     D   W  ++ 
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
               N     ++LL+H M      I +    +++ A S L        +HG +IK GF  
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
                + ++  Y     L  A  VF+++  +D  SW +++A+Y  N    E L++F  M 
Sbjct: 235 --AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
              V  + V   S  +A   +  L    +IH + +++ +  D  +  S + MYSKCG+L 
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            AE+ F+ IE R   SW+AMI+ Y ++G   +A+  F  M+ +  +PN +TL +VL  CA
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
           G+   R GKS+HC  I+  +  E +    A+I  YA+CG+ S   K    +  ++ +++N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELE-TATAVISMYAKCGRFSPALKAFERLPIKDAVAFN 471

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            L   Y + G + +A ++   M+  G+ PDS ++   L  C        G  ++G +IK 
Sbjct: 472 ALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKH 531

Query: 429 DCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINL 486
               E  V  +LI+M++KC     A +LF++   +KS V WN M+ G+  +G + EA+  
Sbjct: 532 GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVAT 591

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F QM +   + + VTF+  ++A + +  L  G  VH  LI  G      +  +L DMYAK
Sbjct: 592 FRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAK 651

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG ++++++ F  +S + +VSW+ M+  Y  HG  + A SLF  M ++ +KP+ V+F+++
Sbjct: 652 CGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSV 711

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L AC H+G VEEGK  F  M     +E +++HYACMVDLL ++G    A +M+  M    
Sbjct: 712 LSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKT 771

Query: 666 NGSIWGALLNGCRIH 680
           +  +WGALLN  R+H
Sbjct: 772 SVGVWGALLNSSRMH 786



 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 185/657 (28%), Positives = 343/657 (52%), Gaps = 10/657 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           + R C N R L ++H  L+V+GL        +LI +Y+       SR++FD+ ++P   +
Sbjct: 11  MLRECKNFRCLLQVHGSLIVSGL----KPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVL 66

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I+ Y       E++  +  M  E+    + + +   L+AC+   D   G ++H  I
Sbjct: 67  WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            + G + D  I T+++  Y +   L  AR+VFDKM  +DVV+W+++++    N   S  L
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +FH M    V+ D V++ +L  A  +L      R +HG V+++         +  I MY
Sbjct: 187 LLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMY 244

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
             C DL +AE  F ++ ++  +SW  M++ Y  +G+F++ LE F  M       N +   
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           + L + A +G L +G ++H   +++G+  +   +  +L+  Y++CG++   E++   I +
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS-VATSLMSMYSKCGELEIAEQLFINIED 363

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+++SW+ +I+ Y + G   EA+ L   M    + P++ ++ S L  C  V + +LG  I
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423

Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H + IK D + E    +++I MY+KCG  + A   FER+  K  V +N++  G+ Q G++
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDA 483

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +A +++  M L+ +  D  T +  +Q C+      +G  V+ ++I +G   + ++  AL
Sbjct: 484 NKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHAL 543

Query: 541 TDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
            +M+ KC  L  A  +FD    E++ VSW+ M++ Y +HGQ  +A + F+QM     +PN
Sbjct: 544 INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            VTF+NI+ A +   ++  G    +++   G          +VD+ ++ G IE + K
Sbjct: 604 AVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEK 660



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 278/554 (50%), Gaps = 5/554 (0%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           S+ LI+ Y     L ++  VF+     D   W  ++  Y  N FFEE + L+  M     
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDV 296

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
            ++     S L+A + +GDL  G  +H   ++ G   D  + TS++  Y + G L+ A +
Sbjct: 297 RMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQ 356

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +F  +  RDVVSWS++IASY       E + +F  M+R  ++P+ VT+ S+ + C  + +
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
            R  +SIH + ++  I+ +     + I MY+KCG    A + F ++  +   ++ A+   
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y + G   KA + +  M      P+  T++ +L +CA       G  V+ QII+ G   E
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSE 536

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQM 390
             ++  ALI  + +C  ++    +    G E++ +SWN++++ Y   G ++EA+    QM
Sbjct: 537 C-HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
           +     P++ +  + + A   + +L++G+ +H  +I+   C    V +SL+DMY+KCG  
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMI 655

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             +   F  I  K +V WN+M+  +  +G +  A++LF  M  N L+ D V+FL+ + AC
Sbjct: 656 ESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715

Query: 510 SNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS- 567
            + G +E+GK +  ++   + +  ++     + D+  K G    A  +   M  +  V  
Sbjct: 716 RHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGV 775

Query: 568 WSAMIDCYGMHGQL 581
           W A+++   MH  L
Sbjct: 776 WGALLNSSRMHCNL 789



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 266/589 (45%), Gaps = 9/589 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VHG +I  G          ++  Y  F   D +R +FD +    VV W+S+I  Y    
Sbjct: 23  QVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78

Query: 176 DVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
              E L  F  M  E G++PD  +     +AC      +    IH  +    ++ D  +G
Sbjct: 79  LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            + + MY K  DL+SA + F K+  +   +W  M+S   ++G    AL  F  M     +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
            + ++L  ++ + + L      + +H  +I+KG    +      LI+ Y  C  +   E 
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAF---SSGLIDMYCNCADLYAAES 255

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V   +  ++  SW  +++ YA  G  +E LEL   M+ + +  +  + AS+L A   VG 
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315

Query: 415 LQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L  G+ IH + ++     D  V +SL+ MYSKCG   +A  LF  I+ + VV W++MI  
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + Q G   EAI+LF  M    ++ + VT  + +Q C+ +     GK +H   I   +  +
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           +   TA+  MYAKCG    A + F+ +  ++ V+++A+   Y   G  N A  ++K M  
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            G+ P+  T + +L  C+       G   +  +   G + +      ++++ ++   +  
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           A  +     F  +   W  ++NG  +H + +      +++ V     N 
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNA 604


>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
          Length = 794

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 221/757 (29%), Positives = 384/757 (50%), Gaps = 61/757 (8%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L    ++HA +L  G  Y  +    T+L+  YA+  +L  ++++F   + 
Sbjct: 40  ILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV 99

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA +I         E +++ + +M+       NF+ P+V +AC +L     G  V
Sbjct: 100 RNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGV 159

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG + K G      + +S+   YG+ G LDDARKVFD +  R+ V+W++++  Y  N   
Sbjct: 160 HGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMN 219

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++   M +EG+EP  VT+ +   A   +  +   +  H   +   +++D  LG S 
Sbjct: 220 EEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSI 279

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y K G +  AE  F  + ++   +W  +IS Y + G  ++A    + M ++    NL
Sbjct: 280 LNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEA----IYMCQLMRRENL 335

Query: 298 ----ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +TL T++ +      L+ GK + C  IR G+  +   L    ++ YA+CG +   +
Sbjct: 336 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDI-VLASTAVDMYAKCGSIVNAK 394

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS---VASSLSACG 410
           KV  +  +++++ WN L+S YA  G+S EAL L  +MQ   + P+  +   +  SL   G
Sbjct: 395 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 454

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
            V                + K+ F+Q     M S   F NL             + W +M
Sbjct: 455 QVN---------------EAKEMFLQ-----MQSSGIFPNL-------------ISWTTM 481

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           + G  QNG S EAI    +M  + L  +  T   A+ AC+N+  L  G+ +H     Y +
Sbjct: 482 MNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIH----GYII 537

Query: 531 RKDIY-----IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
           R   Y     I+T+L DMYAKCGD+  A+RVF S     +  ++AMI  Y ++G++ +A 
Sbjct: 538 RNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAI 597

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDL 644
           +L++ + D G+KP+ +T  ++L +C++   V +    F+ M    G++P L+HY  MVDL
Sbjct: 598 TLYRSLEDGGVKPDNITITSLL-SCNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDL 656

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
           L+ +G+ + A +++  MP+  +  +  +L   C    + ++++ + K L  +  +++G Y
Sbjct: 657 LASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNY 716

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++SN YA EG+WDE  K+R +M+V GLKK PG S I
Sbjct: 717 VMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWI 753



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 11/207 (5%)

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG--VRKD 533
           +NG   EA++L  +M    + +    +   +Q C     L  G+ +H +++  G    ++
Sbjct: 11  KNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARN 70

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            YI+T L   YAKC  L+ AQ +F  +  RNV SW+A+I      G    A   F +ML+
Sbjct: 71  EYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 130

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH----YACMVDLLSRSG 649
           +GI P+     N+  AC   G+++  +F    +  +  +  L H     + + D+  + G
Sbjct: 131 NGIFPDNFVVPNVCKAC---GALQWSRF-GRGVHGYVAKAGLHHCVFVASSLADMYGKCG 186

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNG 676
            ++ A K+   +P   N   W AL+ G
Sbjct: 187 VLDDARKVFDYIP-DRNAVAWNALMVG 212


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 213/700 (30%), Positives = 367/700 (52%), Gaps = 9/700 (1%)

Query: 46  RSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC 105
           R +  +FD     D   +  L+  +  NN   E++ L+  +      +        L+ C
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 106 SSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWS 165
             L D   G +VH + +K GF +D  + TS++  Y +    +D R +FD+M  ++VVSW+
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 166 SIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           S+++ Y  N    E + + + M  EGV P+  T  ++  A  +   +     +H  +++ 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             +    + N+ I MY K   +  AE  F  +  R + +W  MI  Y   G++ +  + F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            +M     + +     T L  C+    L   K +HC +++ G     D +  AL+  Y++
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD-IRTALMVTYSK 353

Query: 346 CGKMSECEKVIH-AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           C  + E  K+   A    N+++W  +I  + +   +K+A++L  QM   G+ P+ F+ ++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            L+  G   SL    Q+H  +IK    K   V ++L+D Y K G    +  +F  I  K 
Sbjct: 414 VLA--GKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC-SNIGQLEKGKWVH 522
           +V W++M+ G  Q  +S +A+ +F Q+    ++ +E TF + I AC S+   +E GK +H
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
              +  G    + + +AL  MY+K G++++A++VF    ER++VSW++MI  YG HG   
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
            A  +F+ M + G+  ++VTF+ +L AC+H+G VEEG+ YFN M + + ++   +HY+CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCM 649

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           VDL SR+G  + A  +I+ MPFPA+ +IW  LL  CR+H+ +++ K   ++L     ND 
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             Y LLSNI+A  GNW+E   VR +M+   +KK  G S I
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 292/592 (49%), Gaps = 14/592 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   L +G   D    T L++ Y +       R +FD     +   W  L+  Y  N 
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNG 184

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E I L ++M  E    + F + +VL A +    +  G +VH  I+K GF+    +  
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCN 244

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++C Y +   + DA  VFD M  RD V+W+ +I  Y       EG +MFH M   GV+ 
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKL 304

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
                 +  + C +   L   + +H  V++   +    +  + +V YSKC  +  A + F
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF 364

Query: 255 VKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL-GSCAGLGW 312
              +      +WTAMI  + ++   +KA++ F +M      PN  T  TVL G  + L  
Sbjct: 365 SMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL-- 422

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
                 +H QII K    +   +  AL++ Y + G + E  +V ++I  ++I++W+ +++
Sbjct: 423 ---LSQLHAQII-KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLT 478

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC-GNVGSLQLGLQIHGHVIKIDCK 431
             A+   S++A+E+ +Q+   G+ P+ ++ +S ++AC  +  +++ G QIH   +K    
Sbjct: 479 GLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKS 538

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           +   V S+L+ MYSK G    A  +F R +++ +V WNSMI G+ Q+G++ +A+ +F  M
Sbjct: 539 NALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIM 598

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
               L +D+VTF+  + AC++ G +E+G K+ +  +  Y + K     + + D+Y++ G 
Sbjct: 599 QNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGM 658

Query: 550 LQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
              A  + + M    +   W  ++    +H  L +   L  + L S ++PN+
Sbjct: 659 FDKAMDIINGMPFPASPTIWRTLLAACRVHRNL-ELGKLAAEKLVS-LQPND 708


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 193/593 (32%), Positives = 314/593 (52%), Gaps = 3/593 (0%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A ++F  M  ++ VSW++++  Y    D  + LK+F  M     +    T+ ++ + C  
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
             SLR  + +H   LR   +ID  LG S + MYSKCG +  A + F KI      +W+AM
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I+  ++ G  Q+A E F  M      PN  TL +++ +   +G LR G+S+H  I + G 
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             + + +   LI  Y +   + +  KV  A+   +++SWN L+S +           +  
Sbjct: 184 ESD-NLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCG 447
           QM   G  P+ F+  S L +C ++   + G Q+H H+IK    D+ FV ++L+DMY+K  
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A + F+R+  + +  W  +I G+ Q   + +A+  F QM    ++ +E T  + + 
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            CS++  LE G+ +H   +  G   DI++ +AL D+Y KCG ++ A+ +F  +  R++VS
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+ +I  Y  HGQ   A   F+ ML  GI P+E TF+ +L ACS  G VEEGK  F++M 
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           +I+G+ P ++HYACMVD+L R+G        I  M       IW  +L  C++H  +D  
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +   K+L       +  Y LLSNI+A +G WD+   +R++M   G+KK PG S
Sbjct: 543 EKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCS 595



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 290/593 (48%), Gaps = 48/593 (8%)

Query: 47  SSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS 106
           + RL F    E +   W  L+  Y      ++ + L+ KM   +   S F   +VL+ C+
Sbjct: 4   AERLFFG-MPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           + G L  G+ +H   ++ G + D+ +  S++  Y + G + DA KVF K+ + DVV+WS+
Sbjct: 63  NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           +I          E  ++FH M R+G  P+  T+ SL      +  LR  +SIHG + +  
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
            + D  + N  I+MY K   +    + F  +      SW A++S +  S    +    F 
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           +ML    +PN+ T I+VL SC+ L     GK VH  II K    + D++G AL++ YA+ 
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHII-KNSSDDDDFVGTALVDMYAKA 301

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
             + +       +  R+I SW ++IS YA+   +++A++   QMQ  G+ P+ +++AS L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 407 SACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           S C ++ +L+ G Q+H   +K     D FV S+L+D+Y KCG    A  +F+ +  + +V
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIV 421

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN++I G+ Q+G   +A+  F  M    +  DE TF+  + ACS +G +E+GK      
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK------ 475

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-----RNVVSWSAMIDCYGMHGQ 580
                                        + FDSMS+      ++  ++ M+D  G  G+
Sbjct: 476 -----------------------------KRFDSMSKIYGINPSIEHYACMVDILGRAGK 506

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            N+     ++M    + P  + +  +L AC   G+V+ G+    A ++F +EP
Sbjct: 507 FNEVKIFIEEM---NLTPYSLIWETVLGACKLHGNVDFGE--KAAKKLFEMEP 554



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 276/542 (50%), Gaps = 18/542 (3%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + + C N   LR+   LHA  L +G   D      L++ Y++ G++  +  VF   + PD
Sbjct: 57  VLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPD 116

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I         +E+  L+H M R+ A  + F   S++   +++GDL  G+ +HG
Sbjct: 117 VVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHG 176

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K GF+ D+++   ++  Y +  C++D  KVF+ MT+ D+VSW+++++ ++D+     
Sbjct: 177 CICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           G ++F+ M+ EG +P+  T +S+  +C  L      + +H H+++     D  +G + + 
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVD 296

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K   L  A   F ++  R   SWT +IS Y ++   +KA++ F +M     +PN  T
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYT 356

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L + L  C+ +  L  G+ +H   ++ G   +  ++G AL++ Y +CG M   E +   +
Sbjct: 357 LASCLSGCSHMATLENGRQLHAVAVKAGHFGDI-FVGSALVDLYGKCGCMEHAEAIFKGL 415

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+I+SWN +IS Y++ G  ++ALE    M + G+MPD  +    LSAC  +G ++ G 
Sbjct: 416 ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK 475

Query: 420 QIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSV-VMWNSMICGFYQ 476
           +    + KI   +  ++  + ++D+  + G  N   +  E +      ++W +++     
Sbjct: 476 KRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKL 535

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW-----VHHKLISYGVR 531
           +GN    ++   +      EM+ +   + I   SNI    KG+W     +   + S G++
Sbjct: 536 HGN----VDFGEKAAKKLFEMEPMMDSSYI-LLSNIFA-SKGRWDDVRNIRALMTSRGIK 589

Query: 532 KD 533
           K+
Sbjct: 590 KE 591



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 146/273 (53%), Gaps = 1/273 (0%)

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           M   E++   + E+N +SWN L++ YA+ G  K+ L+L  +M+        F++++ L  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C N GSL+ G  +H   ++  C+ DEF+  SL+DMYSKCG    A  +F +I+   VV W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           ++MI G  Q G+  EA  LFH M       ++ T  + +   +N+G L  G+ +H  +  
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
           YG   D  +   L  MY K   ++   +VF++M+  ++VSW+A++  +           +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           F QML  G KPN  TF+++L +CS     E GK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGK 273



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 1/226 (0%)

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           LA  LF  + +K+ V WN+++ G+ Q G+  + + LF +M     +  + T  T ++ C+
Sbjct: 3   LAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           N G L +GK +H   +  G   D ++  +L DMY+KCG +  A +VF  +   +VV+WSA
Sbjct: 63  NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           MI      G   +AA LF  M   G +PN+ T  +++   ++ G +  G+     +  +G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            E D      ++ +  +S  +E   K+  +M  P   S W ALL+G
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVS-WNALLSG 227



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 1/127 (0%)

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A+R+F  M E+N VSW+A+++ Y   G       LF +M +   K ++ T   +L  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           C+++GS+ EGK         G E D      +VD+ S+ G +  A K+   +  P +   
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNP-DVVA 119

Query: 670 WGALLNG 676
           W A++ G
Sbjct: 120 WSAMITG 126


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 211/653 (32%), Positives = 340/653 (52%), Gaps = 13/653 (1%)

Query: 101 VLRA---CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           VLRA   C+    L  G  +H RI+  G      I  S++  Y +      A  VFD + 
Sbjct: 13  VLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSIN 72

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFH-----SMVREGVEPDFVTMLSLAEACGELCSL 212
           ++DVVSW+ +I ++      +  L + H      M  + + P+  T+  +  A   L   
Sbjct: 73  NKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDS 132

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           R  R  H   ++     D    +S + MY K G +  A   F ++ +R   SW  MIS Y
Sbjct: 133 RAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGY 192

Query: 273 NRSGWFQKALESFVKML--EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
                  +A E F  M   E  +  N     +VL +      +  G+ VH   ++ G+  
Sbjct: 193 ASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVC 252

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               +  AL+  Y +CG + +  K     G +N ++W+ +++ +A+ G S +AL+L   M
Sbjct: 253 IVS-VANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDM 311

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFK 449
              G +P  F++   ++AC +  ++  G Q+HG+ +K+  + + +V S+L+DMY+KCG  
Sbjct: 312 HQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSI 371

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A   FE IQQ  VV+W S+I G+ QNG+   A+NL+ +M L  +  +++T  + ++AC
Sbjct: 372 VDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKAC 431

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           SN+  L++GK +H  +I Y    +I I +AL+ MYAKCG L    R+F  M  R+V+SW+
Sbjct: 432 SNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWN 491

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           AMI     +G+ N+   LF++M   G KP+ VTF+N+L ACSH G V+ G  YF  M   
Sbjct: 492 AMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDE 551

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           F + P ++HYACMVD+LSR+G +  A + I S        +W  LL   + H+  D+   
Sbjct: 552 FNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAY 611

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             ++L   G+ ++  Y LLS+IY   G W++  +VR +M+  G+ K PG S I
Sbjct: 612 AGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWI 664



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/598 (27%), Positives = 295/598 (49%), Gaps = 15/598 (2%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LRK   LHA +LVTG       +  LI  YA+      + LVFD+    D   W  LI  
Sbjct: 26  LRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINA 85

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPS------VLRACSSLGDLGSGEKVHGRIIK 123
           +        S+ + H + R+       I P+      V  A S+L D  +G + H   +K
Sbjct: 86  FSQQQAHAPSLHVMH-LFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVK 144

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
                D    +S+L  Y + G + +AR +FD+M  R+ VSW+++I+ Y       E  ++
Sbjct: 145 TACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFEL 204

Query: 184 FHSMVRE--GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           F  M  E  G   +     S+  A      +   R +H   ++  +     + N+ + MY
Sbjct: 205 FKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMY 264

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KCG L  A +TF     + + +W+AM++ + + G   KAL+ F  M +  E P+  TL+
Sbjct: 265 VKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLV 324

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            V+ +C+    + EG+ +H   ++ G   +  Y+  AL++ YA+CG + +  K    I +
Sbjct: 325 GVINACSDACAIVEGRQMHGYSLKLGYELQL-YVLSALVDMYAKCGSIVDARKGFECIQQ 383

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            +++ W  +I+ Y + G  + AL L  +MQ  G++P+  ++AS L AC N+ +L  G Q+
Sbjct: 384 PDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQM 443

Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H  +IK +   E  + S+L  MY+KCG  +  Y +F R+  + V+ WN+MI G  QNG  
Sbjct: 444 HAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRG 503

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDT 538
            E + LF +M L   + D VTF+  + ACS++G +++G WV+ K++   + +   +    
Sbjct: 504 NEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG-WVYFKMMFDEFNIAPTVEHYA 562

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
            + D+ ++ G L  A+   +S + +  +  W  ++     H   +  A   +++++ G
Sbjct: 563 CMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELG 620



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 6/192 (3%)

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  L    +  L A+  C+   QL KG+ +H +++  G      I  +L ++YAKC  
Sbjct: 1   MPLLPLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSH 60

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGM---HGQLNDAASLFKQ--MLDSGIKPNEVTFM 604
              A  VFDS++ ++VVSW+ +I+ +     H        LF+Q  M    I PN  T  
Sbjct: 61  FSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLT 120

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            +  A S       G+             D+   + ++++  ++G +  A  +   MP  
Sbjct: 121 GVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP-E 179

Query: 665 ANGSIWGALLNG 676
            N   W  +++G
Sbjct: 180 RNAVSWATMISG 191


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 205/639 (32%), Positives = 350/639 (54%), Gaps = 8/639 (1%)

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
           +L +G  VHG+II+ G          ++  Y + G L  A  +F+ +  +DVVSW+S+I 
Sbjct: 29  NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88

Query: 170 SYFDNADVSEG---LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
            Y  N  +S     +++F  M  + + P+  T+  + +A   L S    R  H  V++  
Sbjct: 89  GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              D  +  S + MY K G +    + F  + +R T +W+ M+S Y   G  ++A++ F 
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208

Query: 287 KMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
             L  KEE   +      VL S A   ++  G+ +HC  I+ G+   +  L  AL+  Y+
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYS 267

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +C  ++E  K+  + G+RN ++W+ +++ Y++ G S EA++L  +M + G+ P  +++  
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            L+AC ++  L+ G Q+H  ++K+  +   F  ++L+DMY+K G    A   F+ +Q++ 
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           V +W S+I G+ QN ++ EA+ L+ +M    +  ++ T  + ++ACS++  LE GK VH 
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             I +G   ++ I +AL+ MY+KCG L+    VF     ++VVSW+AMI     +GQ ++
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMV 642
           A  LF++ML  G++P++VTF+NI+ ACSH G VE G FYFN M    G++P + HYACMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           DLLSR+G ++ A + I S        +W  LL+ C+ H + ++     ++L   G+ ++ 
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            Y  LS IY   G   +  +V   M   G+ K  G S I
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/582 (29%), Positives = 298/582 (51%), Gaps = 13/582 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL     +H  ++ TG       +  L+  YA+ G L  +  +F+     D   W  LI 
Sbjct: 29  NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88

Query: 69  CYMWNNFFEES--ILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
            Y  N     S  ++   + +R Q  + N +    + +A SSL     G + H  ++K  
Sbjct: 89  GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
              D  + TS++  Y + G ++D  KVF  M  R+  +WS++++ Y     V E +K+F+
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208

Query: 186 SMVR---EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
             +R   EG + D+V    L+     +  +   R IH   ++  +     L N+ + MYS
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATI-YVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KC  L  A + F     R + +W+AM++ Y+++G   +A++ F +M     +P+  T++ 
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL +C+ + +L EGK +H  +++ G    + +   AL++ YA+ G +++  K    + ER
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGF-ERHLFATTALVDMYAKAGCLADARKGFDCLQER 386

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           ++  W  LIS Y +   ++EAL L  +M+T G++P+  ++AS L AC ++ +L+LG Q+H
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446

Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           GH IK     E  + S+L  MYSKCG      L+F R   K VV WN+MI G   NG   
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID--TA 539
           EA+ LF +M    +E D+VTF+  I ACS+ G +E+G W +  ++S  +  D  +D    
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYAC 565

Query: 540 LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQ 580
           + D+ ++ G L+ A+   +S + +  +  W  ++     HG+
Sbjct: 566 MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGK 607



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/619 (25%), Positives = 291/619 (47%), Gaps = 65/619 (10%)

Query: 3   LFRSCTNLRKLT-RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F++ ++L+  T    AH LV  +    D    T L+  Y + G +     VF    E +
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKV 117
           ++ W+ ++  Y      EE+I +++  +RE  + + S++++ +VL + ++   +G G ++
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   IK G      +  +++  Y +   L++A K+FD    R+ ++WS+++  Y  N + 
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +K+F  M   G++P   T++ +  AC ++C L   + +H  +L+   +       + 
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY+K G L  A + F  +++R    WT++IS Y ++   ++AL  + +M      PN 
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T+ +VL +C+ L  L  GK VH   I+ G G E   +G AL   Y++CG + +   V  
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP-IGSALSTMYSKCGSLEDGNLVFR 482

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
               ++++SWN +IS  +  G   EALEL  +M   G+ PD  +  + +SAC + G ++ 
Sbjct: 483 RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVER 542

Query: 418 G---LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           G     +    I +D K D +  + ++D+ S+ G            Q K    +      
Sbjct: 543 GWFYFNMMSDQIGLDPKVDHY--ACMVDLLSRAG------------QLKEAKEF------ 582

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK- 532
                  +E+ N+ H +   CL      +   + AC N G+ E G +   KL++ G R+ 
Sbjct: 583 -------IESANIDHGL---CL------WRILLSACKNHGKCELGVYAGEKLMALGSRES 626

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV-----VSWSAMIDCY-------GMHGQ 580
             Y+   L+ +Y   G ++  +RV+  M    V      SW  + + Y        MH  
Sbjct: 627 STYVQ--LSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684

Query: 581 LNDAASLF----KQMLDSG 595
           + +   L     +QM++ G
Sbjct: 685 IEETKDLVCLVSRQMIEEG 703



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 206/389 (52%), Gaps = 10/389 (2%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+  TL+  L   +    L  G++VH QIIR G      +    L+ FYA+CGK+++   
Sbjct: 12  PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQH-ANVLVNFYAKCGKLAKAHS 70

Query: 355 VIHAIGERNILSWNMLISEYARKG---MSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
           + +AI  ++++SWN LI+ Y++ G    S   ++L  +M+   ++P+++++A    A  +
Sbjct: 71  IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130

Query: 412 VGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           + S  +G Q H  V+K+    D +V +SL+ MY K G       +F  + +++   W++M
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTM 190

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEM---DEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           + G+   G   EAI +F+ ++L   E     +  F   + + +    +  G+ +H   I 
Sbjct: 191 VSGYATRGRVEEAIKVFN-LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            G+   + +  AL  MY+KC  L  A ++FDS  +RN ++WSAM+  Y  +G+  +A  L
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
           F +M  +GIKP+E T + +L ACS    +EEGK   + +   G E  L     +VD+ ++
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +G +  A K    +    + ++W +L++G
Sbjct: 370 AGCLADARKGFDCLQ-ERDVALWTSLISG 397



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 8/219 (3%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T L  +   S    L  G+ VH ++I  G    I     L + YAKCG L  A  +F+++
Sbjct: 16  TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAAS---LFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             ++VVSW+++I  Y  +G ++ + +   LF++M    I PN  T   I  A S   S  
Sbjct: 76  ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG- 676
            G+     +       D+     +V +  ++G +E   K+   MP   N   W  +++G 
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGY 194

Query: 677 ---CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
               R+ + I V     +E      +D  +  +LS++ A
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 195/586 (33%), Positives = 328/586 (55%), Gaps = 9/586 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           MT R +  W++++ S   +    + +  F  M R+  +PD  T+    +ACGEL  ++  
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 216 RSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             IHG  L++ + +   L  G+S I MY KCG +  A R F ++EK    +W++M+S + 
Sbjct: 61  EMIHG-FLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFE 119

Query: 274 RSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           ++G   +A+E F +M    +  P+ +TLIT++ +C  L   R G+ VH  ++R+G   + 
Sbjct: 120 KNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDL 179

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             +  +L+  YA+     E   +   + E++++SW+ +I+ Y + G + EAL +  +M  
Sbjct: 180 SLVN-SLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMID 238

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL 451
            G  P+  +V   L AC     L+ G + H   I+   + E  V ++L+DMY KC     
Sbjct: 239 DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 298

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLEMDEVTFLTAIQACS 510
           AY +F RI +K VV W ++I GF  NG +  +I  F  M L N    D +  L  + +CS
Sbjct: 299 AYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCS 358

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G L++ +  H  +I YG   + +I  +L ++Y++CG L  A +VF+ ++ ++ V W++
Sbjct: 359 ELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTS 418

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           +I  YG+HG+   A   F  M+ S  +KPNEVTF++IL ACSH+G + EG   F  M   
Sbjct: 419 LITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVND 478

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           + + P+L+HYA +VDLL R G+++ A ++   MPF     I G LL  CRIH+  ++ +T
Sbjct: 479 YRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAET 538

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           + K+L    +N  GYY L+SN+Y  +G W+   K+R+ ++  G+KK
Sbjct: 539 VAKQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKK 584



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 268/509 (52%), Gaps = 13/509 (2%)

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + W  L+K    +  +E+ +  + +M R++    NF  P  L+AC  L ++  GE +HG 
Sbjct: 7   YQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHGF 66

Query: 121 IIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + K      D  + +S++  Y + G + +A ++F+++   D+V+WSS+++ +  N    +
Sbjct: 67  LKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQ 126

Query: 180 GLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            ++ F  M     V PD VT+++L  AC +L + R  R +HG V+RR    D  L NS +
Sbjct: 127 AVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLL 186

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             Y+K      A   F  + ++   SW+ +I+CY ++G   +AL  F +M++   EPN+ 
Sbjct: 187 NCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVA 246

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++ VL +CA    L +G+  H   IRKG+  E   +  AL++ Y +C    E   V   
Sbjct: 247 TVLCVLQACAAANDLEQGRKTHELAIRKGLETEVK-VSTALVDMYMKCFSPEEAYAVFSR 305

Query: 359 IGERNILSWNMLISEYARKGMSKEALE----LLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           I +++++SW  LIS +   GM+  ++E    +L++  T    PD+  +   L +C  +G 
Sbjct: 306 IPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT---RPDAILMLKVLGSCSELGF 362

Query: 415 LQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L+     H +VIK     + F+ +SL+++YS+CG    A  +F  I  K  V+W S+I G
Sbjct: 363 LKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITG 422

Query: 474 FYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVR 531
           +  +G   +A+  F+ M  +  ++ +EVTFL+ + ACS+ G + +G  +   +++ Y + 
Sbjct: 423 YGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLA 482

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            ++     L D+  + G+L TA  +   M
Sbjct: 483 PNLEHYAVLVDLLGRVGELDTAIEITKRM 511



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 202/392 (51%), Gaps = 4/392 (1%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQA 91
           + LI  Y + G +  +  +F+  ++PD   W+ ++  +  N    +++  + +M      
Sbjct: 81  SSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDV 140

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           T       +++ AC+ L +   G  VHG +++ GF  D  +  S+L  Y +     +A  
Sbjct: 141 TPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 200

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +F  M  +DV+SWS++IA Y  N   +E L++F+ M+ +G EP+  T+L + +AC     
Sbjct: 201 LFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAAND 260

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   R  H   +R+ ++ +  +  + + MY KC     A   F +I K+   SW A+IS 
Sbjct: 261 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISG 320

Query: 272 YNRSGWFQKALESF-VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           +  +G   +++E F + +LE    P+ I ++ VLGSC+ LG+L++ +  H  +I+ G   
Sbjct: 321 FTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDS 380

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
              ++G +L+E Y+ CG +    KV + I  ++ + W  LI+ Y   G   +ALE    M
Sbjct: 381 N-PFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHM 439

Query: 391 -QTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            ++  + P+  +  S LSAC + G +  GL+I
Sbjct: 440 VRSSEVKPNEVTFLSILSACSHAGLIHEGLRI 471



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 166/321 (51%), Gaps = 5/321 (1%)

Query: 1   MPLFRSCTNLR--KLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +CT L   +L R +H  ++  G   D      L+  YA+  + + +  +F    E
Sbjct: 148 ITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAE 207

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W+ +I CY+ N    E++ ++++MI +    +      VL+AC++  DL  G K 
Sbjct: 208 KDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKT 267

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   I+ G + +  + T+++  Y +    ++A  VF ++  +DVVSW ++I+ +  N   
Sbjct: 268 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMA 327

Query: 178 SEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
              ++ F  M+ E    PD + ML +  +C EL  L+ A   H +V++     +  +G S
Sbjct: 328 HRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGAS 387

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EP 295
            + +YS+CG L +A + F +I  + T  WT++I+ Y   G   KALE+F  M+   E +P
Sbjct: 388 LVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKP 447

Query: 296 NLITLITVLGSCAGLGWLREG 316
           N +T +++L +C+  G + EG
Sbjct: 448 NEVTFLSILSACSHAGLIHEG 468


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 212/700 (30%), Positives = 368/700 (52%), Gaps = 9/700 (1%)

Query: 46  RSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC 105
           R +  +FD     D   +  L+  +  NN   E++ L+  +      +        L+ C
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 106 SSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWS 165
             L D   G +VH + +K GF +D  + TS++  Y +    +D R +FD+M  ++VVSW+
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 166 SIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           S+++ Y  N    E + + + M  EGV P+  T  ++  A  +   +     +H  +++ 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             +    + N+ I MY K   +  AE  F  +  R + +W  MI  Y   G++ +  + F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            +M     + +     T L  C+    L   K +HC +++ G     D +  AL+  Y++
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD-IRTALMVTYSK 353

Query: 346 CGKMSECEKVIH-AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           C  + E  K+   A    N+++W  +I  + +   +++A++L  QM   G+ P+ F+ ++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            L+  G   SL    Q+H  +IK    K   V ++L+D Y K G    +  +F  I  K 
Sbjct: 414 VLA--GKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC-SNIGQLEKGKWVH 522
           +V W++M+ G  Q  +S +A+ +F Q+    ++ +E TF + I AC S+   +E GK +H
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
              +  G    + + +AL  MY+K G++++A++VF    ER++VSW++MI  YG HG   
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
            A  +F+ M + G+  ++VTF+ +L AC+H+G VEEG+ YFN M + + ++  ++HY+CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCM 649

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           VDL SR+G  + A  +I+ MPFPA+ +IW  LL  CR+H+ +++ K   ++L     ND 
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             Y LLSNI+A  GNW+E   VR +M+   +KK  G S I
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 159/592 (26%), Positives = 293/592 (49%), Gaps = 14/592 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   L +G   D    T L++ Y +       R +FD     +   W  L+  Y  N 
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNG 184

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +E I L ++M  E    + F + +VL A +    +  G +VH  I+K GF+    +  
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCN 244

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++C Y +   + DA  VFD M  RD V+W+ +I  Y       EG +MFH M   GV+ 
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKL 304

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
                 +  + C +   L   + +H  V++   +    +  + +V YSKC  +  A + F
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF 364

Query: 255 VKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL-GSCAGLGW 312
              +      +WTAMI  + ++   +KA++ F +M      PN  T  TVL G  + L  
Sbjct: 365 SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL-- 422

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
                 +H QII K    +   +  AL++ Y + G + E  +V ++I  ++I++W+ +++
Sbjct: 423 ---LSQLHAQII-KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLT 478

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC-GNVGSLQLGLQIHGHVIKIDCK 431
             A+   S++A+E+ +Q+   G+ P+ ++ +S ++AC  +  +++ G QIH   +K    
Sbjct: 479 GLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKS 538

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           +   V S+L+ MYSK G    A  +F R +++ +V WNSMI G+ Q+G++ +A+ +F  M
Sbjct: 539 NALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIM 598

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
               L +D+VTF+  + AC++ G +E+G K+ +  +  Y + K I   + + D+Y++ G 
Sbjct: 599 QNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGM 658

Query: 550 LQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
              A  + + M    +   W  ++    +H  L +   L  + L S ++PN+
Sbjct: 659 FDKAMDIINGMPFPASPTIWRTLLAACRVHRNL-ELGKLAAEKLVS-LQPND 708


>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
 gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
          Length = 836

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 207/668 (30%), Positives = 355/668 (53%), Gaps = 19/668 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L + C +  +L  L+A    TG   +      LI+ + + G+ + SR VFD  ++ + 
Sbjct: 30  LTLLQQCQDSGELDVLYARFTGTGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNV 89

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + W+++I  Y  N    E+ LL+ +M  E    +      VL ACS   +L  G+KVH  
Sbjct: 90  YSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAY 149

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I    F  D  +QTS++  Y + G   DA+ VFD M  +D+V+W+++  +   N    + 
Sbjct: 150 ISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNG---QS 206

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            K+   M  +GV+P+  T  S+        +L   R++   +L        P+ N+ + +
Sbjct: 207 HKLLREMDLQGVKPNATTYASITRGSS---TLTGCRAMEQRLLASGYMSHVPVQNALVNV 263

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLIT 299
           Y+KCGDL  A + F ++E++   SW+ MIS YN+SG   +A+E +  M  E   EPN +T
Sbjct: 264 YAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVT 323

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHA 358
            + V+G+C G G +  G  VH +++   +G E D  +G AL++ Y +CG + + +K    
Sbjct: 324 FVGVIGACTGCGDVIRGIQVHGRLV--SLGLETDVAVGSALVQMYVKCGSLEDAKKAFDR 381

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + +R++L WN ++S Y+ +G  ++ +E    M    + P++ +  + L AC  +  L  G
Sbjct: 382 VEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMD---VEPNAVTYTNVLIACSAMEDLAQG 438

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            ++H  ++    + D  ++++L+ +Y KC     A  +FE + +K V+ WN M+ G+  +
Sbjct: 439 QKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDH 498

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
               EA+ L+ +M+   +E + VTF  A++ACS I  +E G  V   + + G   D+  D
Sbjct: 499 DCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTD 558

Query: 538 TALTDMYAKCGDLQTAQRVFDSM--SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           TAL +MYA CGDL+ A+RVF S     R+VV W+AMI  Y   G+  +A +L+K ML   
Sbjct: 559 TALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEE 618

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA- 654
           IKPN VT+ ++L ACS  G++ EG+   + +     E D+     ++ + +R G +  A 
Sbjct: 619 IKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAW 678

Query: 655 --FKMIHS 660
             F  IH+
Sbjct: 679 SCFAKIHN 686



 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 199/678 (29%), Positives = 354/678 (52%), Gaps = 23/678 (3%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA++  +   +D    T L+  YA+ GS   ++ VFD+    D   W  +    + N 
Sbjct: 145 KVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNG 204

Query: 75  FFEESILLYHKMIRE---QATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
                    HK++RE   Q    N   Y S+ R  S+L    + E+   R++  G+    
Sbjct: 205 -------QSHKLLREMDLQGVKPNATTYASITRGSSTLTGCRAMEQ---RLLASGYMSHV 254

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            +Q +++  Y + G L+ ARKVF+++  +DV+SWS++I++Y  +   SE ++++  M  E
Sbjct: 255 PVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESE 314

Query: 191 -GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             VEP+ VT + +  AC     +     +HG ++   ++ D  +G++ + MY KCG L  
Sbjct: 315 TSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLED 374

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A++ F ++EKR    W  M+S Y+  G  Q+ +E++  M     EPN +T   VL +C+ 
Sbjct: 375 AKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAM---DVEPNAVTYTNVLIACSA 431

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           +  L +G+ VH +I+  G+  +   +  AL+  Y +C  +    +V  A+G+++++ WN 
Sbjct: 432 MEDLAQGQKVHSRIVSSGLETDMT-METALLSLYIKCRSLKSACQVFEAMGKKDVIPWNF 490

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           ++  Y       EAL L  +M   G+  ++ + A++L AC  +  ++ G ++   +    
Sbjct: 491 MMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKG 550

Query: 430 CKDEFV-QSSLIDMYSKCGFKNLAYLLF--ERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
            + + V  ++L++MY+ CG    A  +F   R +++ VV W +MI  + Q G   EA+ L
Sbjct: 551 FETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALAL 610

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           +  M    ++ + VT+ + + ACS++G + +G+ +H KL       D+ +  +L  MYA+
Sbjct: 611 YKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYAR 670

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG L+ A   F  +  R+V SW+ M+  +  HG    A  L ++M   G+ P+ VTF ++
Sbjct: 671 CGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSV 730

Query: 607 LWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSH GS+E G   F +M + + VEP   HY CMVDLL+R+G +  A ++I  +    
Sbjct: 731 LHACSHEGSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVGLER 790

Query: 666 NGSIWGALLNGCRIHKRI 683
               W  LL   R H  +
Sbjct: 791 ESMGWMMLLGASRTHSNL 808



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 292/589 (49%), Gaps = 18/589 (3%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           + R  + L     +   LL +G     P    L+  YA+ G L  +R VF+  +  D   
Sbjct: 228 ITRGSSTLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVIS 287

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRI 121
           W+ +I  Y  +    E+I +Y  M  E +   N + +  V+ AC+  GD+  G +VHGR+
Sbjct: 288 WSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRL 347

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +  G + D  + ++++  Y + G L+DA+K FD++  RDV+ W+ ++++Y +     + +
Sbjct: 348 VSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVI 407

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           + + +M    VEP+ VT  ++  AC  +  L   + +H  ++   ++ D  +  + + +Y
Sbjct: 408 EAYEAM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLY 464

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KC  L SA + F  + K+    W  M+  Y       +AL  + +M E   E N +T  
Sbjct: 465 IKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFA 524

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHA-I 359
             L +C+ +  +  G  V   I  KG   E D +   AL+  YA CG +   ++V  +  
Sbjct: 525 NALKACSKIKDIETGSKVEAMITTKGF--ETDVVTDTALLNMYAACGDLEAAKRVFGSRR 582

Query: 360 GE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           GE R+++ W  +I+ YA+ G  +EAL L   M +  + P+S +  S LSAC ++G++  G
Sbjct: 583 GERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEG 642

Query: 419 LQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            +IH  +  K +  D  VQ+SL+ MY++CG    A+  F +I  + V  W  M+  F  +
Sbjct: 643 RKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHH 702

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH--HKLISYGVR--KD 533
           G+S  A+ L  +M L  +  D VTF + + ACS+ G LE+G W       + Y V   KD
Sbjct: 703 GHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERG-WASFVSMAVDYAVEPSKD 761

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
            Y+   + D+ A+ G L  A+ V   +  ER  + W  ++     H  L
Sbjct: 762 HYL--CMVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGASRTHSNL 808



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 11/261 (4%)

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           LI ++ K G    +  +F+ +QQK+V  W+ MI  + QNG+  EA  LF +M    +  +
Sbjct: 64  LIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPN 123

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
            VT L  + ACS   +L  GK VH  + +   + DI + T+L +MYAKCG    A+ VFD
Sbjct: 124 AVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFD 183

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           SM+ +++V+W+AM      +GQ   +  L ++M   G+KPN  T+ +I      S ++  
Sbjct: 184 SMARKDIVTWNAMAGASVHNGQ---SHKLLREMDLQGVKPNATTYASITRG---SSTLTG 237

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-- 676
            +     +   G    +     +V++ ++ GD+EGA K+ + +      S W  +++   
Sbjct: 238 CRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVIS-WSTMISAYN 296

Query: 677 --CRIHKRIDVMKTIEKELSV 695
              R  + I++ + +E E SV
Sbjct: 297 QSGRHSEAIEIYRLMESETSV 317


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 208/646 (32%), Positives = 356/646 (55%), Gaps = 10/646 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSR 159
           VL+ C S+ D   G+++HG  I+CG D+ DV + TS++  Y ++  + D RKVF+ M  R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           +VV+W+S++  Y  +  +S+ +++F  M  EGV P+ VT  S+         +   R +H
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              ++        + NS + MY+KCG +  A   F  +E R   SW  +++    +G   
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +AL+ F             T  TV+  CA +  L   + +H  ++++G    Y  +  AL
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGF-HSYGNVMTAL 347

Query: 340 IEFYAECGKMSECEKVIHAI-GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           ++ Y++ G++     +   + G +N++SW  +I+   + G    A  L  +M+  G+ P+
Sbjct: 348 MDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+ ++ L+A  +V SL    QIH  VIK + +    V ++L+  YSK      A  +F+
Sbjct: 408 DFTYSTILTA--SVASLPP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFK 463

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC-SNIGQLE 516
            I QK VV W++M+  + Q G+S  A N+F +M ++ L+ +E T  + I AC S    ++
Sbjct: 464 MIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVD 523

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            G+  H   I +     + + +AL  MYA+ G +++AQ +F+  ++R++VSW++M+  Y 
Sbjct: 524 LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYA 583

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDL 635
            HG    A  +F+QM   GI+ + VTF++++  C+H+G VEEG+ YF++M R +G+ P +
Sbjct: 584 QHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTM 643

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HYACMVDL SR+G ++ A  +I  M FPA   +W  LL  C++HK +++ K   ++L  
Sbjct: 644 EHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLS 703

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               D+  Y LLSNIY+  G W E  +VR +M+   +KK  G S I
Sbjct: 704 LEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWI 749



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 177/635 (27%), Positives = 303/635 (47%), Gaps = 62/635 (9%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    T L++ Y +  S+   R VF+   + +   W  L+  Y+ +    + + L+ +M 
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
            E    ++  + SVL   +S G +  G +VH + +K G      +  S++  Y + G ++
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH---SMVREGVEPDFVTMLSLAE 204
           +AR VF  M +RD+VSW++++A    N    E L++FH   S +    +  + T++ L  
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKL-- 315

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-KRCTT 263
            C  +  L  AR +H  VL+R     G +  + +  YSK G L +A   F+ +   +   
Sbjct: 316 -CANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVV 374

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL-GSCAGLGWLREGKSVHCQ 322
           SWTAMI+   ++G    A   F +M E    PN  T  T+L  S A L        +H Q
Sbjct: 375 SWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASL-----PPQIHAQ 429

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +I+         +G AL+  Y++     E   +   I +++++SW+ +++ YA+ G S  
Sbjct: 430 VIKTNYECT-SIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDG 488

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
           A  + ++M   GL P+ F+++S + AC +    + LG Q H   IK  C D   V S+L+
Sbjct: 489 ATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALV 548

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MY++ G    A  +FER   + +V WNSM+ G+ Q+G S +A+++F QM    +EMD V
Sbjct: 549 SMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGV 608

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TFL+ I  C++ G +E+G                                   QR FDSM
Sbjct: 609 TFLSVIMGCAHAGLVEEG-----------------------------------QRYFDSM 633

Query: 561 SERNVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +    ++     ++ M+D Y   G+L++A SL + M         + +  +L AC    +
Sbjct: 634 ARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGM---SFPAGPMVWRTLLGACKVHKN 690

Query: 616 VEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSG 649
           VE GK    A ++  +EP D   Y  + ++ S +G
Sbjct: 691 VELGK--LAAEKLLSLEPFDSATYVLLSNIYSAAG 723



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 251/528 (47%), Gaps = 19/528 (3%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+HA  +  G          L+  YA+ G +  +R+VF   +  D   W  L+   + N 
Sbjct: 226 RVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNG 285

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ L+H        ++   Y +V++ C+++  LG   ++H  ++K GF     + T
Sbjct: 286 HDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT 345

Query: 135 SILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           +++  Y + G L +A  +F  M+ S++VVSW+++I     N DV     +F  M  +GV 
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T  ++  A   + SL P   IH  V++   +    +G + +  YSK  +   A   
Sbjct: 406 PNDFTYSTILTA--SVASLPP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSI 461

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG-LGW 312
           F  I+++   SW+AM++CY ++G    A   F+KM     +PN  T+ +V+ +CA     
Sbjct: 462 FKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAG 521

Query: 313 LREGKSVHCQIIRKGMGPEYDYL--GPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           +  G+  H   I+      +D L    AL+  YA  G +   + +     +R+++SWN +
Sbjct: 522 VDLGRQFHAISIKHRC---HDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSM 578

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           +S YA+ G S++AL++  QM+  G+  D  +  S +  C + G ++ G +    + +   
Sbjct: 579 LSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYG 638

Query: 431 KDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNGNSLEAIN 485
               ++  + ++D+YS+ G  + A  L E +      ++W +++  C  ++N   +E   
Sbjct: 639 ITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKN---VELGK 695

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           L  +  L+    D  T++      S  G+ ++   V   + +  V+K+
Sbjct: 696 LAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKE 743


>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
 gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
          Length = 625

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 200/631 (31%), Positives = 338/631 (53%), Gaps = 11/631 (1%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+ E    +   +  V  +CS   +L   + +   I    F  + V++ S++  Y   G 
Sbjct: 1   MLLEGFRPNGVTFSGVASSCSGREEL---DTIQASIAASDFHSNVVVKNSLVSAYTRSGD 57

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L  ARKVFD + ++D++SW+S++ +Y  +    E L++F  M    VEPD +T  S+  A
Sbjct: 58  LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGA 114

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C  +  L   + +H  V R + K D  L  + I MYSKCG L SA R F  I+    + W
Sbjct: 115 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            AMIS   + G  ++AL  F +M       + ++ +T+L +C  L  L EG  +H     
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASA 234

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLISEYARKGMSKEAL 384
            GM  +   +  A+   Y++C ++    K+   + E+ N++SWN +I+ YA+ G  +EAL
Sbjct: 235 CGMDKDL-VVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREAL 293

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
           EL   M+  G+ PD  + A +L AC + G    G +IH  + +   + D F+ +++++MY
Sbjct: 294 ELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMY 353

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           +KCG    A   FE++++K+ V W++M+  F Q G   EA++L+ +M     +  E+T  
Sbjct: 354 AKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLA 413

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            A+ ACS IG L++GK +H ++ +    ++ +++  +L +MYAKCG L  A  +F ++  
Sbjct: 414 GALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQR 473

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           R+  SW+ +I  +  HG +++  SL  +M+  G+ P+ VTF  +L ACSH+G ++ G+ +
Sbjct: 474 RDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSH 533

Query: 623 FNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           F +M   + ++P L HY C+VD+LSR+G    A  +  +MPF      W  LL  C++H 
Sbjct: 534 FLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHG 593

Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
                    + L   G   +  Y LLSN+ A
Sbjct: 594 ETKRGVEAARSLLELGFECSSSYVLLSNLVA 624



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 303/597 (50%), Gaps = 9/597 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           SC+   +L  + A +  +  H +      L+ +Y   G LRS+R VFD+ +  D   W  
Sbjct: 19  SCSGREELDTIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNS 78

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  Y  +   EE + L+ KM  E  +I+   Y S+L ACS++  L  G++VH R+ +  
Sbjct: 79  MVVAYSQHGHGEEMLELFRKMDVEPDSIT---YASILGACSAMELLELGKEVHARVSRSR 135

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  D  +  +++  Y + G L+ AR+VFD + S D   W+++I+    +    E L +F 
Sbjct: 136 FKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFE 195

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M  E V  D V+ L++  AC  L  L     IH H     +  D  +  +   MYSKC 
Sbjct: 196 RMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCR 255

Query: 246 DLLSAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
            +  A + F  + EK    SW +MI+ Y +SG  ++ALE +  M E   +P+ IT    L
Sbjct: 256 QVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGAL 315

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
           G+C   G   +G  +H +I    +  +  +L  A++  YA+CG++         +  +N 
Sbjct: 316 GACTSYGGSAKGAEIHSRITESKIRTDV-FLDTAIVNMYAKCGELETAMSYFEKMRRKNA 374

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           ++W+ ++  + ++G  +EAL+L ++M + G  P   ++A +L+AC  +G+LQ G  IH  
Sbjct: 375 VTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSR 434

Query: 425 VIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           +   +      F+Q+SL++MY+KCG   +A  +F  +Q++    WN++I G   +G+  E
Sbjct: 435 IQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDE 494

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALT 541
            ++L  +M  + ++ D VTF   + ACS+ G L++G+     +   Y ++  +     L 
Sbjct: 495 VLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLV 554

Query: 542 DMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           D+ ++ G  + A+ +  +M      V+W+ ++    +HG+        + +L+ G +
Sbjct: 555 DVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHGETKRGVEAARSLLELGFE 611


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 216/712 (30%), Positives = 365/712 (51%), Gaps = 7/712 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++ +Y  +G L  +R +F     P+   W V+I  +    F EE+I  + ++ +     +
Sbjct: 249 VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
                SVL A +SL  L  G  VH +  K G D +  + ++++  Y +   +D A++VF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            +  R++V W++++  +  N    E ++ F  M R G +PD  T  S+  AC  L  L  
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              +H  +++ K   +  + N+ + MY+K G L  A + F  ++     SW A+I  Y +
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
             +  +A   F +M+     P+ ++L +++ +CA +  L+ G+  HC +++ G+      
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTS-TC 547

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
            G +LI+ Y +CG +     V +++  RN++S N LI+ Y   G  +EA+ L  ++Q  G
Sbjct: 548 AGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVG 606

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLA 452
           L P   + A  L  C     L LG QIHG V+K       E V  SL+ +Y        +
Sbjct: 607 LKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDS 666

Query: 453 YLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             LF  +Q  K +V+W ++I G+ Q  +  +A+  +  M  + +  D+  F + ++AC+ 
Sbjct: 667 ETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAG 726

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSA 570
           +  L+ G+ +H  +   G   D    ++L DMYAKCGD++ + +VF  M  R NV+SW++
Sbjct: 727 MSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNS 786

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI     +G   +A  +FKQM    I P+EVTF+ +L ACSH+G V EG+  F+ M   +
Sbjct: 787 MIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNY 846

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            + P + H  CMVD+L R G +  A + I+ +   A+  +W  LL  CR H      K  
Sbjct: 847 KLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRA 906

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             +L       +  Y LLS+IYAE  NW     +R  M++ G+KK+PGYS I
Sbjct: 907 ADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWI 958



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 184/613 (30%), Positives = 305/613 (49%), Gaps = 45/613 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+  L  G+         +++ Y + G++  ++  F   ++ D F W  ++  Y+ +  
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F   +  +  M   +   + F +  VL ACS L D+  G +VH  + K GF      Q  
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +   L DAR VFD   + D VSW+++IA Y  +    E +K+F  M R G  PD
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T++++  A                                   Y   G L  A + F 
Sbjct: 243 QITLVTVVNA-----------------------------------YVALGRLADARKLFT 267

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +I      +W  MIS + + G+ ++A+  F+++ +   +    +L +VL + A L  L  
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  VH Q  ++G+     Y+G AL+  YA+C KM   ++V +++GERNI+ WN ++  +A
Sbjct: 328 GSMVHAQATKEGLDDNV-YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFA 386

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEF 434
           + G+++E +E    M+  G  PD F+  S  SAC ++  L  G Q+H  +IK     + F
Sbjct: 387 QNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLF 446

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V ++L+DMY+K G    A   FE ++    V WN++I G+ Q   + EA  +F +M  N 
Sbjct: 447 VANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNG 506

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  DEV+  + + AC+N+ +L++G+  H  L+  G+       ++L DMY KCG +  A+
Sbjct: 507 VLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAAR 566

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            VF SM  RNVVS +A+I  Y M G L +A  LF+++   G+KP EVTF  +L  C    
Sbjct: 567 DVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGC---- 621

Query: 615 SVEEGKFYFNAMR 627
              +G F  N  R
Sbjct: 622 ---DGAFMLNLGR 631



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 169/700 (24%), Positives = 328/700 (46%), Gaps = 47/700 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C+ L+ +    ++H  +  TG  +       LI+ YA+   LR +RLVFD     D
Sbjct: 148 VLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLD 207

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  LI  Y+ + F  E++                                   KV  
Sbjct: 208 TVSWTALIAGYVRDGFPMEAV-----------------------------------KVFD 232

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+ + G   D +   +++  Y   G L DARK+F ++ + +VV+W+ +I+ +       E
Sbjct: 233 RMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  + + G++    ++ S+  A   L  L     +H    +  +  +  +G++ + 
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVN 352

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KC  + +A++ F  + +R    W AM+  + ++G  Q+ +E F  M     +P+  T
Sbjct: 353 MYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFT 412

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++  +CA L +L  G  +H  +I+        ++  AL++ YA+ G + E  K    +
Sbjct: 413 FTSIFSACASLHYLNFGGQLHTVMIKNKFASNL-FVANALVDMYAKSGALKEARKQFELM 471

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              + +SWN +I  Y ++  + EA  +  +M + G++PD  S+AS +SAC NV  L+ G 
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q H  ++K+         SSLIDMY KCG    A  +F  +  ++VV  N++I G Y  G
Sbjct: 532 QCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG-YTMG 590

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYID 537
           +  EAI+LF ++ +  L+  EVTF   +  C     L  G+ +H +++ +G +     + 
Sbjct: 591 HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +L  +Y        ++ +F  +   + +V W+A+I  Y        A   ++ M    I
Sbjct: 651 VSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNI 710

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            P++  F ++L AC+   S++ G+   + +   G   D    + ++D+ ++ GD++G+ +
Sbjct: 711 LPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQ 770

Query: 657 MIHSMPFPANGSIWGALLNGCR----IHKRIDVMKTIEKE 692
           +   MP   N   W +++ G        + +++ K +E++
Sbjct: 771 VFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQ 810



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 282/569 (49%), Gaps = 6/569 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA     GL  +    + L+  YA+   + +++ VF++  E +  +W  ++  +  N  
Sbjct: 331 VHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL 390

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E +  +  M R       F + S+  AC+SL  L  G ++H  +IK  F  +  +  +
Sbjct: 391 AQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANA 450

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G L +ARK F+ M   D VSW++II  Y       E   MF  MV  GV PD
Sbjct: 451 LVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            V++ S+  AC  +  L+  +  H  +++  +      G+S I MY KCG +L+A   F 
Sbjct: 511 EVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   S  A+I+ Y   G  ++A+  F ++  V  +P  +T   +L  C G   L  
Sbjct: 571 SMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEY 374
           G+ +H Q+++ G     + +  +L+  Y    +  + E +   +   + ++ W  LIS Y
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGY 689

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
           A++   ++AL+    M++  ++PD  + AS L AC  + SLQ G +IH  +       DE
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDE 749

Query: 434 FVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              SSLIDMY+KCG  K    +  E  ++ +V+ WNSMI G  +NG + EA+ +F QM  
Sbjct: 750 VTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQ 809

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQ 551
             +  DEVTFL  + ACS+ G++ +G+ V   ++ +Y +   +     + D+  + G L 
Sbjct: 810 QSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLN 869

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHG 579
            A+   + +  + + + WS ++     HG
Sbjct: 870 EAEEFINKLGCKADPMLWSTLLGACRKHG 898



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 276/556 (49%), Gaps = 37/556 (6%)

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           L  L + + +H + +K G     ++   I+  Y + G +D A+K F ++  +DV +W+S+
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           ++ Y D+   +  ++ F  M    V P+  T   +  AC  L  +   R +H  V +   
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
                     I MY+KC  L  A   F       T SWTA+I+ Y R G+  +A++ F +
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M  V   P+ ITL+TV+ +   LG                                    
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALG------------------------------------ 257

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
           ++++  K+   I   N+++WN++IS +A++G ++EA+   ++++  GL     S+ S LS
Sbjct: 258 RLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLS 317

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           A  ++  L  G  +H    K    D  +V S+L++MY+KC   + A  +F  + ++++V+
Sbjct: 318 AIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVL 377

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           WN+M+ GF QNG + E +  F  M  +  + DE TF +   AC+++  L  G  +H  +I
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMI 437

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
                 ++++  AL DMYAK G L+ A++ F+ M   + VSW+A+I  Y      ++A  
Sbjct: 438 KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFF 497

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
           +F++M+ +G+ P+EV+  +I+ AC++   ++ G+     +   G++      + ++D+  
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYV 557

Query: 647 RSGDIEGAFKMIHSMP 662
           + G +  A  + +SMP
Sbjct: 558 KCGVVLAARDVFYSMP 573



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 222/468 (47%), Gaps = 36/468 (7%)

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           L +L  A+ IH   L+  + + G LGN  + +Y KCG++  A++ F ++EK+   +W ++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           +S Y   G F   ++SFV M   +  PN  T   VL +C+GL  +  G+ VHC + + G 
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
           G    +    LI+ YA+C  + +   V       + +SW  LI+ Y R G   EA+++  
Sbjct: 174 GFR-SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
           +MQ  G  PD  ++                                   ++++ Y   G 
Sbjct: 233 RMQRVGHAPDQITLV----------------------------------TVVNAYVALGR 258

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  LF +I   +VV WN MI G  + G + EAI+ F ++    L+    +  + + A
Sbjct: 259 LADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
            +++  L  G  VH +    G+  ++Y+ +AL +MYAKC  +  A++VF+S+ ERN+V W
Sbjct: 319 IASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLW 378

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +AM+  +  +G   +    F  M   G +P+E TF +I  AC+    +  G      M  
Sbjct: 379 NAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK 438

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                +L     +VD+ ++SG ++ A K    M    N S W A++ G
Sbjct: 439 NKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVS-WNAIIVG 485



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 9/298 (3%)

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IH   +KI       + + ++D+Y KCG  + A   F R+++K V  WNS++  +  +G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
               +  F  M+ + +  +E TF   + ACS +  +  G+ VH  +   G     +    
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L DMYAKC  L+ A+ VFD     + VSW+A+I  Y   G   +A  +F +M   G  P+
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FK 656
           ++T + ++ A    G + + +  F  +      P++  +  M+   ++ G  E A   F 
Sbjct: 243 QITLVTVVNAYVALGRLADARKLFTQIP----NPNVVAWNVMISGHAKRGFAEEAISFFL 298

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAE 713
            +      A  S  G++L+       ++    +  + +  G +DN Y  + L N+YA+
Sbjct: 299 ELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAK 356



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 6/184 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  +  L     +H+ +  TG + D    + LI+ YA+ G ++ S  VF      +
Sbjct: 720 VLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRN 779

Query: 60  SFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + + W  +I     N + EE++ ++ +M ++        +  VL ACS  G +  G KV 
Sbjct: 780 NVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVF 839

Query: 119 GRIIKCGFDKDDVIQTSILC-TYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNAD 176
             ++        V     +    G +G L++A +  +K+  + D + WS+++ +   + D
Sbjct: 840 DLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGD 899

Query: 177 VSEG 180
              G
Sbjct: 900 EVRG 903


>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 218/787 (27%), Positives = 400/787 (50%), Gaps = 50/787 (6%)

Query: 3    LFRSC---TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
            L +SC   + +R  + LH + L  G          L+  YA+ G+L     +F    + D
Sbjct: 977  LLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRD 1036

Query: 60   SFMWAVLIKCYMWNNFFEESIL-LYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKV 117
              +W +++         E  ++ L+  M +  +A  ++     VL  C+ L +  +G+ V
Sbjct: 1037 PVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSV 1095

Query: 118  HGRIIKCGFDKDDVIQTSILCTYGEFGCL-DDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
            H  +IK G +   +   +++  Y + G +  DA   F+++  +DVVSW+++IA + +N  
Sbjct: 1096 HSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKF 1155

Query: 177  VSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL---CSLRPARSIHGHVLRR-KIKIDGP 232
              E  K+FH+M++  ++P++ T+ S+   C  L      R  + +H HVLRR ++  D  
Sbjct: 1156 TEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVS 1215

Query: 233  LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
            + NS +  Y +   +  AE  F  ++ R   SW A+I+ Y  +G + KALE F + + ++
Sbjct: 1216 VINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLE 1275

Query: 293  E-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
              +P+ +TL++VL +CA +  L+  K +H  IIR     E   +G AL+ FYA+C     
Sbjct: 1276 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 1335

Query: 352  CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              +    I  ++++SWN ++  +   G     + LL  M   G+ PDS ++ + +     
Sbjct: 1336 ALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAA 1395

Query: 412  VGSLQLGLQIHGHVIKIDC----KDEFVQSSLIDMYSKCG--------FKNL-------- 451
            V  ++   + H + I+           + + ++D Y+KCG        F +L        
Sbjct: 1396 VSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVT 1455

Query: 452  ----------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
                            AY +F  + +  +  WN M+  + +N    +A++LFH++    +
Sbjct: 1456 CNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGM 1515

Query: 496  EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
            + D VT ++ + AC+++  +   +  H  +I      D+ ++ A  DMY+KCG +  A +
Sbjct: 1516 KPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYK 1574

Query: 556  VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
            +F S  ++++V ++AM+  + MHG   +A  +F  ML+ G+KP+ V    +L+ACSH+G 
Sbjct: 1575 LFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGL 1634

Query: 616  VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            V+EG   FN++ ++ G +P ++ YAC+VDLL+R G I+ A+  +  MP  AN +IWG LL
Sbjct: 1635 VDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLL 1694

Query: 675  NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
              CR H  +++ + +   L    +++ G Y ++SN+YA +  WD   ++R +M    LKK
Sbjct: 1695 GACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKK 1754

Query: 735  VPGYSTI 741
              G S I
Sbjct: 1755 PAGCSWI 1761



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 179/621 (28%), Positives = 311/621 (50%), Gaps = 68/621 (10%)

Query: 97   IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
            I  ++L++C +   +  G  +HG  +K G      +   +L  Y + G LD   K+F +M
Sbjct: 973  ILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEM 1032

Query: 157  TSRDVVSWSSIIASYFD-NADVSEGLKMFHS--MVREGVEPDFVTMLSLAEACGELCSLR 213
              RD V W+ +++      +  +E +++F +  MV E  +P+ VT+  +   C  L    
Sbjct: 1033 DQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA-KPNSVTIAIVLPVCARLRE-D 1090

Query: 214  PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS-AERTFVKIEKRCTTSWTAMISCY 272
              +S+H +V++  ++     GN+ I MY+KCG + S A   F +IE +   SW A+I+ +
Sbjct: 1091 AGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGF 1150

Query: 273  NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL---GWLREGKSVHCQIIRKGMG 329
            + + + ++A + F  ML+   +PN  T+ ++L  CA L      R GK VHC ++R+   
Sbjct: 1151 SENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMEL 1210

Query: 330  PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL--- 386
             E   +  +L+ FY    +M + E +   +  R+++SWN +I+ YA  G   +ALEL   
Sbjct: 1211 VEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSE 1270

Query: 387  LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYS 444
             + ++T  + PDS ++ S L AC +V +LQ+   IHG++I+     +D  V ++L+  Y+
Sbjct: 1271 FISLET--IKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA 1328

Query: 445  KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
            KC +   A   F  I +K ++ WN+++  F ++G     +NL H M    +  D +T LT
Sbjct: 1329 KCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILT 1388

Query: 505  AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT---ALTDMYAKCGDLQTAQRVFDSMS 561
             IQ  + + +++K K  H   I +G+ +     T    + D YAKCG+++ A  +F S+S
Sbjct: 1389 IIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLS 1448

Query: 562  E-RNVV-------------------------------SWSAMIDCYGMHGQLNDAASLFK 589
            E RNVV                               +W+ M+  Y  +   + A SLF 
Sbjct: 1449 EKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFH 1508

Query: 590  QMLDSGIKPNEVTFMNILWACSHSGSVE-----EG---KFYFNAMRIFGVEPDLQHYACM 641
            ++   G+KP+ VT M+IL AC+H  SV       G   +  FN +R+ G           
Sbjct: 1509 ELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRLNG---------AF 1559

Query: 642  VDLLSRSGDIEGAFKMIHSMP 662
            +D+ S+ G + GA+K+  S P
Sbjct: 1560 IDMYSKCGSVFGAYKLFLSSP 1580



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 288/588 (48%), Gaps = 42/588 (7%)

Query: 179  EGLKMFHSMVR--EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            E L +F   VR   G +P+   + +L ++C    ++R    +HG+ L+        L   
Sbjct: 952  EALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKG 1011

Query: 237  FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ----KALESFVKMLEVK 292
             + +Y+K G L    + F ++++R    W  ++S       FQ    + +  F  M  V 
Sbjct: 1012 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGL---AGFQSHEAEVMRLFRAMHMVN 1068

Query: 293  E-EPNLITLITVLGSCAGLGWLRE--GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
            E +PN +T+  VL  CA    LRE  GKSVH  +I+ G+   +   G ALI  YA+CG +
Sbjct: 1069 EAKPNSVTIAIVLPVCAR---LREDAGKSVHSYVIKSGL-ESHTLAGNALISMYAKCGLV 1124

Query: 350  -SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
             S+     + I  ++++SWN +I+ ++    ++EA +L   M    + P+  ++AS L  
Sbjct: 1125 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV 1184

Query: 409  CGNV---GSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            C ++      + G ++H HV++     +D  V +SL+  Y +      A  LF  ++ + 
Sbjct: 1185 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRD 1244

Query: 464  VVMWNSMICGFYQNGNSLEAINLFHQ-MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            +V WN++I G+  NG  L+A+ LF + + L  ++ D VT ++ + AC+++  L+  K +H
Sbjct: 1245 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 1304

Query: 523  HKLISY-GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
              +I + G+R+D  +  AL   YAKC   Q A + F  +S ++++SW+A++D +   G  
Sbjct: 1305 GYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCE 1364

Query: 582  NDAASLFKQMLDSGIKPNEVTFMNILW---ACSHSGSVEEGKFYFNAMRIFGV-----EP 633
                +L   ML  GI+P+ +T + I+    A S    V+E   Y  ++R FG+      P
Sbjct: 1365 THLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSY--SIR-FGLLQGDAXP 1421

Query: 634  DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             L +   M+D  ++ G+++ A  +  S+    N     ++++G       D    I   +
Sbjct: 1422 TLGN--GMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTM 1479

Query: 694  SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            S T   D   + L+  +YAE    D+   +   ++  G+K  P   TI
Sbjct: 1480 SET---DLTTWNLMVRVYAENDFPDQALSLFHELQGQGMK--PDIVTI 1522


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 197/516 (38%), Positives = 304/516 (58%), Gaps = 13/516 (2%)

Query: 234 GNS---FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
           GNS    I  Y++ G + SA + F K  +    +W AMI  Y+R G   +AL  + +M  
Sbjct: 39  GNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMAS 98

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               P+  T   VL +C     LR G+    Q + +G G +  ++G A++  YA+CGKM 
Sbjct: 99  EGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDV-FVGAAVLNLYAKCGKMD 157

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           E  +V   +G R+++ W  +I+  A+ G ++EA+++  QM    +  D   +   + AC 
Sbjct: 158 EAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACT 217

Query: 411 NVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
            +G  ++GL IHG++I+ D   D  VQ+SL+DMY+K G   LA  +F R+  K+V+ W++
Sbjct: 218 TLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSA 277

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I GF QNG +  A+ L   M     + D V+ ++ + ACS +G L+ GK VH     Y 
Sbjct: 278 LISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVH----GYI 333

Query: 530 VRK---DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
           VR+   D    TA+ DMY+KCG L  A+ VFD +S R+ +SW+A+I  YG+HG   +A S
Sbjct: 334 VRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALS 393

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLL 645
           LF QM ++ +KP+  TF ++L A SHSG VE+G+++F+ M   + ++P  +HYACMVDLL
Sbjct: 394 LFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLL 453

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
           SR+G +E A ++I SM      +IW ALL+GC  H +  + +   K++     +D G Y+
Sbjct: 454 SRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYS 513

Query: 706 LLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L+SN +A    WDE  +VR IM+ TG+KKVPGYS +
Sbjct: 514 LVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVM 549



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 257/474 (54%), Gaps = 9/474 (1%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           + ++HA +++TG+     ++ +LI+SYA +G + S+R VFD   +     W  +I  Y  
Sbjct: 23  IAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSR 82

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
                E++ LYH+M  E     +  Y  VL+AC+   DL SGE+   + +  G+  D  +
Sbjct: 83  RGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFV 142

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             ++L  Y + G +D+A +VFDKM  RD+V W+++I     N    E + ++  M ++ V
Sbjct: 143 GAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRV 202

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           E D V ML L +AC  L   +   SIHG+++R+ I +D  +  S + MY+K G L  A  
Sbjct: 203 EGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASC 262

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++  +   SW+A+IS + ++G+   AL+  V M     +P+ ++L++VL +C+ +G+
Sbjct: 263 VFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGF 322

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGP-ALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
           L+ GKSVH  I+R+     +D +   A+I+ Y++CG +S    V   I  R+ +SWN +I
Sbjct: 323 LKLGKSVHGYIVRR---LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAII 379

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKI 428
           + Y   G  +EAL L +QM+   + PD  + AS LSA  + G ++ G     I  +  KI
Sbjct: 380 ASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKI 439

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFER-IQQKSVVMWNSMICGFYQNGNSL 481
              ++   + ++D+ S+ G    A  L E  I +  + +W +++ G   +G  L
Sbjct: 440 QPSEKHY-ACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFL 492



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 261/487 (53%), Gaps = 5/487 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           K+H  +I  G          ++ +Y   G ++ AR+VFDK     V +W+++I +Y    
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
            + E L ++H M  EGV PD  T   + +AC     LR         + +    D  +G 
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + +Y+KCG +  A R F K+ +R    WT MI+   ++G  ++A++ + +M + + E 
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + + ++ ++ +C  LG  + G S+H  +IRK +  +   +  +L++ YA+ G +     V
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDV-IVQTSLVDMYAKNGHLELASCV 263

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  +N++SW+ LIS +A+ G +  AL+L+V MQ++G  PDS S+ S L AC  VG L
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323

Query: 416 QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           +LG  +HG++++    D    +++IDMYSKCG  + A  +F++I  +  + WN++I  + 
Sbjct: 324 KLGKSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG 383

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDI 534
            +G+  EA++LF QM    ++ D  TF + + A S+ G +EKG+ W    +  Y ++   
Sbjct: 384 IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSE 443

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
                + D+ ++ G ++ AQ + +SM +E  +  W A++     HG+        K++L+
Sbjct: 444 KHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLE 503

Query: 594 SGIKPNE 600
             + P++
Sbjct: 504 --LNPDD 508


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 203/647 (31%), Positives = 337/647 (52%), Gaps = 11/647 (1%)

Query: 105 CSSLGDLGSGEKVHGRIIKCG-----FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           CS L  L  G  VH  ++           + ++   ++  YG  G  D AR VFD M  R
Sbjct: 52  CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           + VSW+++IA++  N+  ++ + +F SM+R G  PD   + S   AC EL  L   R +H
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              ++ +   D  + N+ + MYSK G +      F +I  +   SW ++I+   + G   
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREM 231

Query: 280 KALESFVKML-EVKEEPNLITLITVLGSCAGL-GWLREGKSVHCQIIRKGMGPEYDYLGP 337
            AL+ F +M+ E    PN     +V  +C+ +   L  G+ +H   ++  +     Y G 
Sbjct: 232 DALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQL-DRNSYAGC 290

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           +L + YA C ++    KV + I   +++SWN LI+ ++ KG+  EA+ L  +M+  GL P
Sbjct: 291 SLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRP 350

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           D  +V + L AC    +L  G  IH +++K+    D  V +SL+ MY++C   + A  +F
Sbjct: 351 DGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVF 410

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
                + VV WNS++    Q+ +  +   LF  ++ +   +D ++    + A + +G  E
Sbjct: 411 HETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFE 470

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCY 575
             K VH      G+  D  +   L D YAKCG L  A ++F+ M + R+V SWS++I  Y
Sbjct: 471 MVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 530

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPD 634
              G   +A  LF +M + G+KPN VTF+ +L ACS  G V+EG +Y++ M+  +G+ P 
Sbjct: 531 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPT 590

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
            +H +C++DLL+R+G +  A K +  MPF  +  +W  LL   R H  +D+ K   + + 
Sbjct: 591 REHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVL 650

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               + +  Y LL NIYA  GNW+EF +++  M  +G++K PG S I
Sbjct: 651 NIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWI 697



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/590 (27%), Positives = 300/590 (50%), Gaps = 15/590 (2%)

Query: 7   CTNLRKLTR---LHAHLLVTG-----LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           C+ LR L +   +H HLL +      L ++   S  LI  Y   G+  S+R+VFD   + 
Sbjct: 52  CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   WA +I  +  N+   +++ L+  M+R       F   S + ACS LGDLG G +VH
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            + IK     D ++Q +++  Y + G + D   +F+++  +D++SW SIIA         
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREM 231

Query: 179 EGLKMFHSMVREGV-EPDFVTMLSLAEACGELC-SLRPARSIHGHVLRRKIKIDGPLGNS 236
           + L++F  M+ EGV  P+     S+  AC  +  SL     IHG  ++ ++  +   G S
Sbjct: 232 DALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCS 291

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
              MY++C +L SA + F +IE     SW ++I+ ++  G   +A+  F +M +    P+
Sbjct: 292 LSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPD 351

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            IT++ +L +C G   L +G+S+H  +++ G+G +   +  +L+  YA C   S    V 
Sbjct: 352 GITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDV-IVSNSLLSMYARCLDFSSAMDVF 410

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           H   +R++++WN +++   +    ++  +L   +       D  S+ + LSA   +G  +
Sbjct: 411 HETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFE 470

Query: 417 LGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGF 474
           +  Q+H +  K+    D  + + LID Y+KCG  + A  LFE +   + V  W+S+I G+
Sbjct: 471 MVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 530

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKD 533
            Q G + EA++LF +M    ++ + VTF+  + ACS +G +++G + +  +   YG+   
Sbjct: 531 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPT 590

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN 582
               + + D+ A+ G L  A +  D M  E +++ W  ++     H  ++
Sbjct: 591 REHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVD 640


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 206/729 (28%), Positives = 380/729 (52%), Gaps = 5/729 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++  GL  +      L+  Y +   + ++R +FD   +   F W V+I  +  +  
Sbjct: 44  IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTKSQE 103

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F  ++ L+ +M+      + F + SV+R+C+ LGDL  G +VHG ++K GF+ + V+ +S
Sbjct: 104 FASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSS 163

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y + G L +AR++F  + + D +SW+ +I+S       SE L+ +  M++ GV P+
Sbjct: 164 LTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIKAGVPPN 223

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T + L  A   L  L   ++IH  ++ R I ++  L  S +  YS    +  A R   
Sbjct: 224 EFTFVKLLGASSFL-GLEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAVRVLN 282

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
              ++    WT+++S + R+   ++A+ +F++M  +   PN  T   +L  C+ +  L  
Sbjct: 283 STGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDL 342

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS-ECEKVIHAIGERNILSWNMLISEY 374
           GK +H Q I+ G     D +G AL+  Y +C     E  +V  A+   N++SW  LI   
Sbjct: 343 GKQIHSQTIKVGFEDSTD-VGNALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLILGL 401

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE- 433
              G  ++   LL++M    + P+  +++  L AC  +  L+L L+IHG++++     E 
Sbjct: 402 VDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEM 461

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V +SL+D Y+  G  + A+ +   +  +  + + S++  F + G    A+++ + MY +
Sbjct: 462 IVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGD 521

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            + MD+++    I A +N+G  E GK +H   +  G    + +  +L DMY+KCG L+ A
Sbjct: 522 GIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDA 581

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           ++VF+ ++  +VVSW+ ++      G+++ A S F++M   G +P+ VTF+ +L ACS  
Sbjct: 582 KKVFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKG 641

Query: 614 GSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
              E G  YF +M+ I  +EP ++HY  +V +L R+G +E A  ++ +M    N  I+  
Sbjct: 642 RLTEMGLEYFQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 701

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  CR H  + + + +  +      +D  +Y LL+++Y E G  +   K R++M   GL
Sbjct: 702 LLRACRYHGNLSLGEDMANKGLALAPSDPAFYILLADLYDESGKPELAQKTRNLMSEKGL 761

Query: 733 KKVPGYSTI 741
            K    ST+
Sbjct: 762 CKKLSKSTV 770



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/610 (27%), Positives = 306/610 (50%), Gaps = 5/610 (0%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G  +H  +IK G  ++  +  ++L  Y +   + +ARK+FD+M  R V +W+ +I+++  
Sbjct: 41  GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTK 100

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           + + +  L +F  M+  G+ P+  T  S+  +C  L  L     +HG VL+   + +  +
Sbjct: 101 SQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVV 160

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           G+S   +YSKCG L  A   F  ++   T SWT MIS    +  + +AL  + +M++   
Sbjct: 161 GSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIKAGV 220

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            PN  T + +LG+ + LG L  GK++H  II +G+ P    L  +L+ FY+    M +  
Sbjct: 221 PPNEFTFVKLLGASSFLG-LEFGKTIHSSIIVRGI-PLNVVLKTSLVYFYSHFSIMEDAV 278

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V+++ GE+++  W  ++S + R   +KEA+   ++M++ GL P++F+ ++ LS C  V 
Sbjct: 279 RVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVR 338

Query: 414 SLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL-AYLLFERIQQKSVVMWNSMI 471
           SL LG QIH   IK+  +D   V ++L+ MY KC    + A  +F  +   +VV W ++I
Sbjct: 339 SLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLI 398

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G   +G   +   L  +M    +E + VT    ++ACS +  L     +H  L+   V 
Sbjct: 399 LGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVD 458

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            ++ +  +L D YA  G +  A  V  SM  R+ +++++++  +   G+   A S+   M
Sbjct: 459 GEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHM 518

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
              GI+ ++++    + A ++ G+ E GK         G    +     +VD+ S+ G +
Sbjct: 519 YGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSL 578

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           E A K+   +  P   S W  L++G     RI    +  +E+ + GT  +    L+    
Sbjct: 579 EDAKKVFEEIAMPDVVS-WNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSA 637

Query: 712 AEEGNWDEFG 721
             +G   E G
Sbjct: 638 CSKGRLTEMG 647



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 176/660 (26%), Positives = 308/660 (46%), Gaps = 43/660 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC  L  L+   R+H  +L TG   +    + L + Y++ G L+ +R +F + +  D
Sbjct: 129 VIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNAD 188

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W ++I   +    + E++  Y +MI+     + F +  +L A S LG L  G+ +H 
Sbjct: 189 TISWTMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHS 247

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            II  G   + V++TS++  Y  F  ++DA +V +    +DV  W+S+++ +  N    E
Sbjct: 248 SIIVRGIPLNVVLKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKE 307

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  M   G+ P+  T  ++   C  + SL   + IH   ++   +    +GN+ + 
Sbjct: 308 AVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVS 367

Query: 240 MYSKC-GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
           MY KC    + A R F  +      SWT +I      G+ Q      ++M++ + EPN +
Sbjct: 368 MYMKCSASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFV 427

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL  VL +C+ L +LR    +H  ++R+ +  E   +G +L++ YA  GK+     V  +
Sbjct: 428 TLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEM-IVGNSLVDAYASSGKVDYAWNVTRS 486

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R+ +++  L++ +   G  + AL ++  M   G+  D  S+   +SA  N+G+ + G
Sbjct: 487 MDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHETG 546

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +H + +K        V +SL+DMYSKCG    A  +FE I    VV WN ++ G    
Sbjct: 547 KHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSGLASI 606

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G    A++ F +M +   E D VTFL  + ACS      KG+     L  +   K I+  
Sbjct: 607 GRISSALSAFEEMRMKGTEPDSVTFLILLSACS------KGRLTEMGLEYFQSMKTIH-- 658

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
               +M                  E  +  +  ++   G  G+L +A  + + M    +K
Sbjct: 659 ----NM------------------EPQIEHYVHLVGILGRAGRLEEATGVVETM---HLK 693

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGAFK 656
           PN + F  +L AC + G++  G+   N  +   + P D   Y  + DL   SG  E A K
Sbjct: 694 PNAMIFKTLLRACRYHGNLSLGEDMAN--KGLALAPSDPAFYILLADLYDESGKPELAQK 751



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 219/467 (46%), Gaps = 16/467 (3%)

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           E  S R    IH  V++  +  +  L N+ + +Y K   + +A + F ++ +R   +WT 
Sbjct: 34  ESSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTV 93

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MIS + +S  F  AL  F +M+     PN  T  +V+ SCAGLG L  G  VH  +++ G
Sbjct: 94  MISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTG 153

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                  +G +L + Y++CGK+ E  ++  ++   + +SW M+IS         EAL   
Sbjct: 154 FEGN-SVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFY 212

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKC 446
            +M   G+ P+ F+    L A   +G L+ G  IH  +I        V ++SL+  YS  
Sbjct: 213 SEMIKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHF 271

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
                A  +     ++ V +W S++ GF +N  + EA+  F +M    L  +  T+   +
Sbjct: 272 SIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAIL 331

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT-AQRVFDSMSERNV 565
             CS +  L+ GK +H + I  G      +  AL  MY KC   +  A RVF +M   NV
Sbjct: 332 SLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPNV 391

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           VSW+ +I     HG   D   L  +M+   ++PN VT   +L ACS      + K+    
Sbjct: 392 VSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACS------KLKYLRLV 445

Query: 626 MRIFG------VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           + I G      V+ ++     +VD  + SG ++ A+ +  SM    N
Sbjct: 446 LEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDN 492


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 331/607 (54%), Gaps = 5/607 (0%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           I+  Y + G L  AR++FD    R VV+W+++I +Y  +    +  K+F  M R G +PD
Sbjct: 80  IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           +VT ++L   C +L   +     H  +++    ++  + N+ +  Y K G L SA R F+
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++    + S+  MI+ Y  +G  ++A+E FV+M  +  +P+  T   V+ +  GL     
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAF 259

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H  +++        ++G A ++FY++   ++E  K+ + + E + +S+N++I+ YA
Sbjct: 260 GQQIHGFVVKTSFIRNV-FVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF- 434
             G  KE+++L  ++Q       +F   + LS   +   LQ+G Q+H  V+      +F 
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V +SL+DMY+KCG    A  +F R+  +S V W +MI    Q G     + LF++M    
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN 438

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  D+ TF   ++A +N+  +  GK +H  +I  G   ++Y   AL DMYA C  ++ A 
Sbjct: 439 VSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAI 497

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           + F+ MSERNVV+W+A++  Y  +G        F++M+ SG +P+ V+F+ IL ACSH  
Sbjct: 498 KTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCR 557

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            VEEG  YFN M  ++ + P  +HY  MVD L RSG  + A K++  MPF  +  +W ++
Sbjct: 558 LVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSV 617

Query: 674 LNGCRIHKRIDVMKTIEKEL-SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LN CRIHK   + +    +L ++    D   Y  +SNI+AE G WD   KV+  M   G+
Sbjct: 618 LNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGV 677

Query: 733 KKVPGYS 739
           +K+P YS
Sbjct: 678 RKLPAYS 684



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 286/604 (47%), Gaps = 11/604 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I  Y + G+L  +R +FD   E     W  +I  Y  +N F ++  L+ +M R  +   
Sbjct: 80  IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              Y ++L  C+ L       + H +I+K G   +  +  ++L +Y + G LD AR++F 
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M   D VS++ +I  Y +N    E +++F  M   G +P   T  ++  A   L     
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAF 259

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IHG V++     +  +GN+F+  YSK   +    + F ++ +    S+  +I+ Y  
Sbjct: 260 GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAW 319

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G  +++++ F ++     +       T+L   A    L+ G+ +H Q++     P++  
Sbjct: 320 VGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDF-R 378

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +L++ YA+CGK  E +++   +  R+ + W  +IS   ++G+ +  L+L  +M+   
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN 438

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
           +  D  + A  L A  N+ S+ LG Q+H  VI+    + +   +L+DMY+ C     A  
Sbjct: 439 VSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIK 498

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
            FE + +++VV WN+++  + QNG+    +  F +M ++  + D V+FL  + ACS+   
Sbjct: 499 TFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRL 558

Query: 515 LEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
           +E+G K+ +     Y +       TA+ D   + G    A+++   M  E + + W++++
Sbjct: 559 VEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618

Query: 573 DCYGMHGQL----NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +   +H         A  LF   +     P  VT  NI        SV + K    AMR 
Sbjct: 619 NSCRIHKNYALARKAAGQLFNMKVLRDAAP-YVTMSNIFAEAGQWDSVVKVK---KAMRD 674

Query: 629 FGVE 632
            GV 
Sbjct: 675 RGVR 678



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 262/571 (45%), Gaps = 43/571 (7%)

Query: 1   MPLFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L   C +L   ++L + HA ++  G H +      L++SY + G L S+R +F     
Sbjct: 144 ITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCG 203

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            DS  + V+I  Y  N   EE+I L+ +M       S+F + +V+ A   L D   G+++
Sbjct: 204 WDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQI 263

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K  F ++  +  + L  Y +  C+++ RK+F++M   D VS++ II +Y     V
Sbjct: 264 HGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKV 323

Query: 178 SEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            E + +F  +     +     F TMLS+A +      L+  R +H  V+      D  + 
Sbjct: 324 KESIDLFQELQFTTFDRKNFPFPTMLSIAASS---LDLQMGRQLHAQVVVSMADPDFRVS 380

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           NS + MY+KCG    A+R F+++  R T  WTAMIS   + G  +  L+ F +M      
Sbjct: 381 NSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVS 440

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
            +  T   VL + A L  +  GK +H  +IR G    Y   G AL++ YA C  + +  K
Sbjct: 441 ADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYS--GCALLDMYANCASIKDAIK 498

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
               + ERN+++WN L+S YA+ G  K  L+   +M   G  PDS S    L+AC +   
Sbjct: 499 TFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRL 558

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           ++ GL+                    DM    G  NLA              + +M+   
Sbjct: 559 VEEGLKYFN-----------------DM---SGVYNLA---------PKREHYTAMVDAL 589

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            ++G   EA  L  QM     E DE+ + + + +C         +    +L +  V +D 
Sbjct: 590 CRSGRFDEAEKLMGQM---PFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDA 646

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
                +++++A+ G   +  +V  +M +R V
Sbjct: 647 APYVTMSNIFAEAGQWDSVVKVKKAMRDRGV 677



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 94/179 (52%)

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           ++ F    +I  Y K G   +A  +F+   +++VV W +MI  + ++    +A  LF +M
Sbjct: 72  RNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEM 131

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
           + +  + D VT++T +  C+++   ++    H +++  G   +  +   L D Y K G L
Sbjct: 132 HRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGL 191

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
            +A+R+F  M   + VS++ MI  Y  +G   +A  LF +M + G KP++ TF  ++ A
Sbjct: 192 DSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 220/731 (30%), Positives = 373/731 (51%), Gaps = 8/731 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            ++H  ++  GL  D    T L+  Y   G    +  VF      +   W  L+  Y+  
Sbjct: 50  VQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYV-- 107

Query: 74  NFFEESILL--YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           ++ E S+++  Y +M  E  + ++    SV+  C SL +   G +V G +IK G + +  
Sbjct: 108 DYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVS 167

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  S++  +G FG +++A  VF  M   D +SW+S+IA+Y  N    E L+ F  M R  
Sbjct: 168 VANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVH 227

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            E +  T+ ++   CG + +L+  R IH  VL+     +    N+ I MYS  G    AE
Sbjct: 228 KEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAE 287

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  + ++   SW +M++CY + G    AL+    M  ++   N +T  + L +C+   
Sbjct: 288 LVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPE 347

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
           +  EGK +H  +I  G+  E   +G AL+  YA+ G M E +KV   + +R+ ++WN LI
Sbjct: 348 FATEGKILHALVIHVGL-HENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALI 406

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHGHVIKIDC 430
             +A      EAL+    M+  G+  +  ++++ L AC     L + G+ IH  +I    
Sbjct: 407 GGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGF 466

Query: 431 K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           + DE+VQ+SLI MY+KCG  N +  +F+R+  K+   WN+M+     +G+  EA+    +
Sbjct: 467 QSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLE 526

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    + +DE +F   + A + +  LE+G+ +H   +  G   + ++ +A  DMY KCG+
Sbjct: 527 MRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGE 586

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           +    R+      R+ +SW+ +   +  HG    A   F +M++ G+KP+ VTF+++L A
Sbjct: 587 IDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSA 646

Query: 610 CSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSH G VEEG  Y+++M + FG+   + H  C++DLL RSG    A   I  MP      
Sbjct: 647 CSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDH 706

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           +W +LL  C+ H  +++ +   + L     +D+  Y L SNI A  G W++  K+R  M 
Sbjct: 707 VWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMG 766

Query: 729 VTGLKKVPGYS 739
           +  +KK P  S
Sbjct: 767 LNKIKKKPACS 777



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 165/596 (27%), Positives = 297/596 (49%), Gaps = 7/596 (1%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           + ES+  +++M       S     S++ AC  S   L  G +VHG I+K G   D  + T
Sbjct: 10  YRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGT 69

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  YG +G   DA KVF +M  ++VVSW++++ +Y D  + S  + ++  M  EG+  
Sbjct: 70  SLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSC 129

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  TM S+   C  L +      + GHV++  ++ +  + NS I M+   G +  A   F
Sbjct: 130 NDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVF 189

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +++  T SW +MI+ Y R+G  +++L  F  M  V +E N  TL T+L  C  +  L+
Sbjct: 190 SGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLK 249

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+ +H  +++ G           LI  Y++ G+  + E V   + E++++SWN +++ Y
Sbjct: 250 WGRGIHSLVLKFGWNSNV-CASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACY 308

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE- 433
           A+ G   +AL+LL  M       +  +  S+L+AC +      G  +H  VI +   +  
Sbjct: 309 AQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENV 368

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++L+ +Y+K G    A  +F+ + ++  V WN++I G   +    EA+  F  M   
Sbjct: 369 IVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREE 428

Query: 494 CLEMDEVTFLTAIQACSNIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            + ++ +T    + AC      LE G  +H  +I  G + D Y+  +L  MYAKCGDL +
Sbjct: 429 GVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNS 488

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           +  +FD ++ +N  +W+AM+     HG + +A     +M  +G+  +E +F   L A + 
Sbjct: 489 SNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAK 548

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
              +EEG+         G + +    +  +D+  + G+I+   ++I   P P N S
Sbjct: 549 LAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRII---PRPINRS 601



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 206/410 (50%), Gaps = 4/410 (0%)

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW-LREGKSVHCQIIRKG 327
           +S + R+G +++++  F +M +   +P+ I + +++ +C    W L EG  VH  I++ G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +  +  ++G +L+  Y   G  ++  KV   +  +N++SW  L+  Y   G     + + 
Sbjct: 61  LLSDV-FVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKC 446
            +M++ G+  +  +++S +S C ++ +  LG Q+ GHVIK   +    V +SLI M+   
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G    A  +F  + +   + WNSMI  + +NG   E++  F  M+    E++  T  T +
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
             C ++  L+ G+ +H  ++ +G   ++     L  MY+  G  + A+ VF  M E++++
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW++M+ CY   G   DA  L   M       N VTF + L ACS      EGK     +
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              G+  ++     +V L ++SG +  A K+  +MP   +G  W AL+ G
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGG 408



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 249/525 (47%), Gaps = 26/525 (4%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  NL+    +H+ +L  G + +  AS  LI  Y++ G    + LVF    E D   W  
Sbjct: 244 SVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNS 303

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++ CY  +    +++ L   M   +   +   + S L ACS       G+ +H  +I  G
Sbjct: 304 MMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVG 363

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
             ++ ++  +++  Y + G + +A+KVF  M  RD V+W+++I  + D+ +  E LK F 
Sbjct: 364 LHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFK 423

Query: 186 SMVREGVEPDFVTMLSLAEAC---GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
            M  EGV  +++T+ ++  AC    +L  L     IH  ++    + D  + NS I MY+
Sbjct: 424 LMREEGVPINYITISNVLGACLAPNDL--LEHGMPIHAFIILTGFQSDEYVQNSLITMYA 481

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGDL S+   F ++  +  ++W AM++     G  ++AL+  ++M       +  +   
Sbjct: 482 KCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSE 541

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
            L + A L  L EG+ +H   ++ G      ++  A ++ Y +CG++ +  ++I     R
Sbjct: 542 CLAAAAKLAILEEGQQLHGLAVKLGCDSN-PFVASATMDMYGKCGEIDDVLRIIPRPINR 600

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + LSWN+L S ++R G  ++A E   +M   G+ PD  +  S LSAC + G ++ GL  +
Sbjct: 601 SRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYY 660

Query: 423 GHVIKIDCKDEFVQSS-------LIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGF 474
             +IK     EF   +       +ID+  + G F      + E     +  +W S++   
Sbjct: 661 DSMIK-----EFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAAC 715

Query: 475 YQNGNSLEAINLFHQMYLNCLEM---DEVTFLTAIQACSNIGQLE 516
             +GN    + L  +   N L++   D+  ++     C+  G+ E
Sbjct: 716 KTHGN----LELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWE 756


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 215/675 (31%), Positives = 348/675 (51%), Gaps = 8/675 (1%)

Query: 73  NNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           +NF+ E++  +    +  +  I    Y S++ ACSS   L  G K+H  I+      D +
Sbjct: 44  SNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI 103

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +   IL  YG+ G L DAR+VFD M  R++VS++S+I  Y  N   +E ++++  M++E 
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED 163

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           + PD     S+ +AC     +   + +H  V++ +        N+ I MY +   +  A 
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGL 310
           R F  I  +   SW+++I+ +++ G+  +AL    +ML      PN     + L +C+ L
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL 283

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
                G  +H   I+  +       G +L + YA CG ++   +V   I   +  SWN++
Sbjct: 284 LRPDYGSQIHGLCIKSELAGNA-IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVI 342

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
           I+  A  G + EA+ +  QM++ G +PD+ S+ S L A     +L  G+QIH ++IK   
Sbjct: 343 IAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFH 488
             D  V +SL+ MY+ C      + LFE  +  +  V WN+++    Q+   +E + LF 
Sbjct: 403 LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFK 462

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            M ++  E D +T    ++ C  I  L+ G  VH   +  G+  + +I   L DMYAKCG
Sbjct: 463 LMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  A+R+FDSM  R+VVSWS +I  Y   G   +A  LFK+M  +GI+PN VTF+ +L 
Sbjct: 523 SLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLT 582

Query: 609 ACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSH G VEEG K Y       G+ P  +H +C+VDLL+R+G +  A + I  M    + 
Sbjct: 583 ACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDV 642

Query: 668 SIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
            +W  LL+ C+    + +  K  E  L +   N    + LL +++A  GNW+    +RS 
Sbjct: 643 VVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA-HVLLCSMHASSGNWENAALLRSS 701

Query: 727 MEVTGLKKVPGYSTI 741
           M+   +KK+PG S I
Sbjct: 702 MKKHDVKKIPGQSWI 716



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 183/644 (28%), Positives = 319/644 (49%), Gaps = 18/644 (2%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +C++ R L    ++H H+L +   YD   +  ++  Y + GSLR +R VFD   E
Sbjct: 71  ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   +  +I  Y  N    E+I LY KM++E      F + S+++AC+S  D+G G+++
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H ++IK       + Q +++  Y  F  + DA +VF  +  +D++SWSSIIA +      
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250

Query: 178 SEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRP--ARSIHGHVLRRKIKIDGPLG 234
            E L     M+  GV  P+     S  +AC  L  LRP     IHG  ++ ++  +   G
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL--LRPDYGSQIHGLCIKSELAGNAIAG 308

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            S   MY++CG L SA R F +IE+  T SW  +I+    +G+  +A+  F +M      
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ I+L ++L +      L +G  +H  II+ G   +      +L+  Y  C  +  C  
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN-SLLTMYTFCSDLYCCFN 427

Query: 355 VIHAI-GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +        + +SWN +++   +     E L L   M      PD  ++ + L  C  + 
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           SL+LG Q+H + +K     ++F+++ LIDMY+KCG    A  +F+ +  + VV W+++I 
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVR 531
           G+ Q+G   EA+ LF +M    +E + VTF+  + ACS++G +E+G  ++  +   +G+ 
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
                 + + D+ A+ G L  A+R  D M  E +VV W  ++      G ++ A    + 
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667

Query: 591 MLDSGIKPNEVTFMNILWACSH--SGSVEEGKFYFNAMRIFGVE 632
           +L   I P   T  ++L    H  SG+ E      ++M+   V+
Sbjct: 668 ILK--IDPFNST-AHVLLCSMHASSGNWENAALLRSSMKKHDVK 708


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 190/599 (31%), Positives = 326/599 (54%), Gaps = 4/599 (0%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSL 202
           G L  AR +FDKMT RD +SW+++IA Y + +D  E L +F +M V  G + D   +   
Sbjct: 71  GQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVA 130

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            +AC    ++     +HG  ++  +     + ++ I MY K G +    R F K+  R  
Sbjct: 131 LKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNV 190

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SWTA+I+    +G+  + L  F +M   K   +  T    L + A    L  GK++H Q
Sbjct: 191 VSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 250

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            I++G   E  ++   L   Y +CGK     ++   +   +++SW  LIS Y + G  + 
Sbjct: 251 TIKQGF-DESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEH 309

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLID 441
           A+E   +M+   + P+ ++ A+ +S+C N+ + + G QIHGHV+++   +   V +S+I 
Sbjct: 310 AVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIIT 369

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +YSKCG    A L+F  I +K ++ W+++I  + Q G + EA +    M     + +E  
Sbjct: 370 LYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFA 429

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             + +  C ++  LE+GK VH  L+  G+  +  + +A+  MY+KCG +Q A ++F+ M 
Sbjct: 430 LSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMK 489

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
             +++SW+AMI+ Y  HG   +A +LF+++   G+KP+ V F+ +L AC+H+G V+ G +
Sbjct: 490 INDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFY 549

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           YF  M  ++ + P  +HY C++DLL R+G +  A  +I SMPF  +  +W  LL  CR+H
Sbjct: 550 YFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVH 609

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +D  +   ++L     N  G +  L+NIYA +G W E   +R +M+  G+ K  G+S
Sbjct: 610 GDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWS 668



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 290/582 (49%), Gaps = 11/582 (1%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATIS 94
           ++   + G L  +R +FD     D   W  LI  Y+  +   E+++L+  M +       
Sbjct: 64  LKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRD 123

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F+    L+AC+   ++  GE +HG  +K G      + ++++  Y + G ++   +VF+
Sbjct: 124 QFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFE 183

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KM +R+VVSW++IIA         EGL  F  M R  V  D  T     +A  +   L  
Sbjct: 184 KMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHH 243

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            ++IH   +++       + N+   MY+KCG      R F K+      SWT +IS Y +
Sbjct: 244 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQ 303

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G  + A+E+F +M +    PN  T   V+ SCA L   + G+ +H  ++R G+      
Sbjct: 304 MGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS- 362

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  ++I  Y++CG +     V H I  ++I+SW+ +IS Y++ G +KEA + L  M+  G
Sbjct: 363 VANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREG 422

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAY 453
             P+ F+++S LS CG++  L+ G Q+H H++ I    E  V S++I MYSKCG    A 
Sbjct: 423 PKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEAS 482

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F  ++   ++ W +MI G+ ++G S EAINLF ++    L+ D V F+  + AC++ G
Sbjct: 483 KIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAG 542

Query: 514 QLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAM 571
            ++ G +    + + Y +         L D+  + G L  A+ +  SM    + V WS +
Sbjct: 543 MVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTL 602

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPN----EVTFMNILWA 609
           +    +HG ++      +Q+L   + PN     +T  NI  A
Sbjct: 603 LRACRVHGDVDRGRWTAEQLLQ--LDPNSAGTHITLANIYAA 642



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 255/554 (46%), Gaps = 40/554 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   + +GL +    S+ LI+ Y ++G +     VF+     +   W  +I   +   +
Sbjct: 146 LHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGY 205

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E +L + +M R +    +  +   L+A +    L  G+ +H + IK GFD+   +  +
Sbjct: 206 NMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 265

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y + G  D   ++F+KM   DVVSW+++I++Y    +    ++ F  M +  V P+
Sbjct: 266 LATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPN 325

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  ++  +C  L + +    IHGHVLR  +     + NS I +YSKCG L SA   F 
Sbjct: 326 KYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFH 385

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I ++   SW+ +IS Y++ G+ ++A +    M     +PN   L +VL  C  +  L +
Sbjct: 386 GITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 445

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH  ++  G+  E   +  A+I  Y++CG + E  K+ + +   +I+SW  +I+ YA
Sbjct: 446 GKQVHAHLLCIGIDHE-AMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYA 504

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKD 432
             G S+EA+ L  ++ + GL PD       L+AC + G + LG     +  +V +I    
Sbjct: 505 EHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSK 564

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           E     LID+  + G          R+                      EA ++   M  
Sbjct: 565 EHY-GCLIDLLCRAG----------RLS---------------------EAEHIIRSMPF 592

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           +    D+V + T ++AC   G +++G+W   +L+             L ++YA  G  + 
Sbjct: 593 HT---DDVVWSTLLRACRVHGDVDRGRWTAEQLLQLD-PNSAGTHITLANIYAAKGRWKE 648

Query: 553 AQRVFDSMSERNVV 566
           A  +   M  + V+
Sbjct: 649 AAHIRKLMKSKGVI 662



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC NL       ++H H+L  GL      +  +I  Y++ G L+S+ LVF      D
Sbjct: 332 VISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKD 391

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y    + +E+      M RE    + F   SVL  C S+  L  G++VH 
Sbjct: 392 IISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHA 451

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++  G D + ++ ++I+  Y + G + +A K+F+ M   D++SW+++I  Y ++    E
Sbjct: 452 HLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQE 511

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            + +F  +   G++PD+V  + +  AC
Sbjct: 512 AINLFEKISSVGLKPDYVMFIGVLTAC 538



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L +  ++HAHLL  G+ ++    + +I  Y++ GS++ +  +F+  K  D   W  +I  
Sbjct: 443 LEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMING 502

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG--DLG-------------SG 114
           Y  + + +E+I L+ K+          ++  VL AC+  G  DLG             S 
Sbjct: 503 YAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISP 562

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFD 173
            K H     C  D        +LC  G    L +A  +   M    D V WS+++ +   
Sbjct: 563 SKEH---YGCLID--------LLCRAGR---LSEAEHIIRSMPFHTDDVVWSTLLRACRV 608

Query: 174 NADVSEG 180
           + DV  G
Sbjct: 609 HGDVDRG 615


>gi|357167647|ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g08490-like [Brachypodium
           distachyon]
          Length = 929

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 216/770 (28%), Positives = 385/770 (50%), Gaps = 55/770 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH  ++ TG       +  +++ Y   G+L  +RLVFD    PD+  W +LI       +
Sbjct: 108 LHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLVFDEMSCPDTVCWNILITGSSRAGY 167

Query: 76  FEESILLYHKMIR---EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           F++   L+  M+    +++  +      V+  C+ L  L +G  +HG ++K G + D + 
Sbjct: 168 FDDVFDLFRSMVACGADESMPTAVTVAVVIPVCAKLRVLRAGMSIHGYVVKTGLESDTLC 227

Query: 133 QTSILCTY---GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +++  Y   G  G +DDA + F  +  +DVVSW+SIIA + +N    E L +F  M  
Sbjct: 228 GNALISLYAKCGGSGTMDDAHRAFSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTS 287

Query: 190 EGVEPDFVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           +   P++ T+ ++   C  +   +   + +HG V R  + +D  + N+ +  YSK  ++ 
Sbjct: 288 DKCLPNYSTVANILPVCSFMEHGKYYGKEVHGFVFRVGLYVDISVCNALMTHYSKVYEMR 347

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +AE  F  +  R   +W  +IS Y  +G+  + L+ F ++L     P+ ++LI++L +CA
Sbjct: 348 AAESIFRSMNTRDIITWNTIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACA 407

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +G  + G  VH  I R  +  +   L  +L+ FY++C +  +       I  ++ +SWN
Sbjct: 408 QVGDAKGGMGVHGYIFRHPVLHQETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWN 467

Query: 369 MLISEYARKGMSKEAL-----ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            ++S  A++G   E       E+  ++  W    DS ++ + +      GS ++  + HG
Sbjct: 468 AILSACAKRGKHIEEFFKLFNEMCHEVTRW----DSVTILNVVRVSNLCGSTKMVREAHG 523

Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCG--------FKNLAY--------------------- 453
           + +++    E  V ++++D Y+KCG        F+NLA                      
Sbjct: 524 YSLRVGYIGETSVANAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEE 583

Query: 454 --LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             ++F ++ +K    WN MI  + QNG   +A +LF Q  L C   D ++    + AC +
Sbjct: 584 AEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQAFSLFRQ--LQC--PDTISITNILLACIH 639

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  ++  +  H  ++   + +DI+++ +L D Y+KCG++  A  +F     +++V+++AM
Sbjct: 640 LSLVQLVRQCHGYMLRASL-EDIHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAM 698

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFG 630
           I  Y MHG   +A  LF +ML  GI P+ V    +L ACSH+G V+ G   F ++R I+ 
Sbjct: 699 IGGYAMHGMAEEAVELFSEMLTLGIGPDHVVLTALLSACSHAGLVDAGIKIFKSVREIYR 758

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSM-PFPANGSIWGALLNGCRIHKRIDVMKTI 689
           +EP  +HY CMVDLLSR G ++ A+     M P   N + WG+L+  C++H  + + +  
Sbjct: 759 IEPTAEHYTCMVDLLSRGGRLQDAYNFALDMPPHLVNANAWGSLIGACKVHGDVRIGQLA 818

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +L      D G Y  +SNIYA    WD    VR +M+   +KK  G S
Sbjct: 819 ADQLFSMEFGDIGNYVTVSNIYAAGEEWDGVEHVRKLMKSKDMKKPAGCS 868



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 186/692 (26%), Positives = 318/692 (45%), Gaps = 52/692 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSS--RLVFDTFKEPDSFMWAVLIKCYMWN 73
           L   L+  G  + P  S RL  +      L  S    +FD     D    + L++    N
Sbjct: 4   LPTRLVKPGCCFSPTISPRLAHAALCWNRLHKSDAHSLFDAVPATDHRHCSELLRARTAN 63

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-GEKVHGRIIKCGFDKDDVI 132
                SI L   M+            + +++ S+L D  S G  +HG +++ G      +
Sbjct: 64  GDHSGSISLLRGMLGRGLRPDRLALAAAIKSASALRDGESLGRCLHGFVVRTGHAAGVAV 123

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII-----ASYFDNADVSEGLKMFHSM 187
             +++  YG  G L DAR VFD+M+  D V W+ +I     A YFD+        +F SM
Sbjct: 124 AKAVMDMYGRCGTLADARLVFDEMSCPDTVCWNILITGSSRAGYFDDV-----FDLFRSM 178

Query: 188 VREGVE---PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           V  G +   P  VT+  +   C +L  LR   SIHG+V++  ++ D   GN+ I +Y+KC
Sbjct: 179 VACGADESMPTAVTVAVVIPVCAKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKC 238

Query: 245 ---GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
              G +  A R F  I  +   SW ++I+ ++ +G F++AL  F +M   K  PN  T+ 
Sbjct: 239 GGSGTMDDAHRAFSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVA 298

Query: 302 TVLGSCAGLGWLR-EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            +L  C+ +   +  GK VH  + R G+  +      AL+  Y++  +M   E +  ++ 
Sbjct: 299 NILPVCSFMEHGKYYGKEVHGFVFRVGLYVDISVCN-ALMTHYSKVYEMRAAESIFRSMN 357

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R+I++WN +IS Y   G     L+L  ++ + G+ PDS S+ S L+AC  VG  + G+ 
Sbjct: 358 TRDIITWNTIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMG 417

Query: 421 IHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           +HG++ +  +  ++  + +SL+  YS+C   + A   F  I  K  + WN+++    + G
Sbjct: 418 VHGYIFRHPVLHQETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWNAILSACAKRG 477

Query: 479 NSLEA-INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
             +E    LF++M       D VT L  ++  +  G  +  +  H   +  G   +  + 
Sbjct: 478 KHIEEFFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVA 537

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ------- 590
            A+ D YAKCG  Q A  +F +++ RN+V+++ MI CY  +  + +A  +F Q       
Sbjct: 538 NAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQT 597

Query: 591 -------------MLDSGIK-------PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
                        M D           P+ ++  NIL AC H   V+  +     M    
Sbjct: 598 TWNLMIQVYAQNGMCDQAFSLFRQLQCPDTISITNILLACIHLSLVQLVRQCHGYMLRAS 657

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           +E D+     ++D  S+ G+I  A+ +    P
Sbjct: 658 LE-DIHLEGSLLDAYSKCGNITDAYNLFQVSP 688



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 164/652 (25%), Positives = 299/652 (45%), Gaps = 49/652 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAE---MGSLRSSRLVFDTFKE 57
           +P+      LR    +H +++ TGL  D      LI  YA+    G++  +   F +   
Sbjct: 197 IPVCAKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGC 256

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS--GE 115
            D   W  +I  +  N  F+E++ L+ +M  ++   +     ++L  CS + + G   G+
Sbjct: 257 KDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCSFM-EHGKYYGK 315

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VHG + + G   D  +  +++  Y +   +  A  +F  M +RD+++W++II+ Y  N 
Sbjct: 316 EVHGFVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTIISGYLMNG 375

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLG 234
             S  L +FH ++  G+ PD V+++SL  AC ++   +    +HG++ R  +   +  L 
Sbjct: 376 YHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRHPVLHQETSLM 435

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS-CYNRSGWFQKALESFVKMLEVKE 293
           NS +  YS+C     A   F  I  + + SW A++S C  R    ++  + F +M     
Sbjct: 436 NSLVSFYSQCNRFDDALHAFADILSKDSISWNAILSACAKRGKHIEEFFKLFNEMCHEVT 495

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             + +T++ V+      G  +  +  H   +R G   E   +  A+++ YA+CG   + +
Sbjct: 496 RWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETS-VANAILDAYAKCGYPQDAD 554

Query: 354 KVIHAIGERNIL-------------------------------SWNMLISEYARKGMSKE 382
            +   +  RNI+                               +WN++I  YA+ GM  +
Sbjct: 555 VLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQ 614

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           A  L  Q+Q     PD+ S+ + L AC ++  +QL  Q HG++++   +D  ++ SL+D 
Sbjct: 615 AFSLFRQLQC----PDTISITNILLACIHLSLVQLVRQCHGYMLRASLEDIHLEGSLLDA 670

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           YSKCG    AY LF+    K +V + +MI G+  +G + EA+ LF +M    +  D V  
Sbjct: 671 YSKCGNITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVL 730

Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
              + ACS+ G ++ G  +   +   Y +       T + D+ ++ G LQ A      M 
Sbjct: 731 TALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLSRGGRLQDAYNFALDMP 790

Query: 562 ER--NVVSWSAMIDCYGMHGQLNDAASLFKQM--LDSGIKPNEVTFMNILWA 609
               N  +W ++I    +HG +        Q+  ++ G   N VT  NI  A
Sbjct: 791 PHLVNANAWGSLIGACKVHGDVRIGQLAADQLFSMEFGDIGNYVTVSNIYAA 842


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 200/549 (36%), Positives = 309/549 (56%), Gaps = 19/549 (3%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           SL + C    S++  + IH  +L   I       NSF+   +   D   A   F  I   
Sbjct: 37  SLLQQC---LSIKQLKQIHAQLLTNSIHKP----NSFLYKIADLKDFAYASVFFSNILDP 89

Query: 261 CTTSWTAMI----SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
              S+  MI    + +N+S     ALE + +M  +  +PN +T   +  +C+ L  +  G
Sbjct: 90  TEYSFNVMIRGLSTAWNKSSL---ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           +  HC +IR+G+  E  ++  +LI  YA CGKM +  KV   I +++++SWN +IS Y++
Sbjct: 147 RMGHCSVIRRGLD-EDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSK 205

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFV 435
              + EA+ L  +M   G  P+  S+ S L ACG +G L+LG  +   V++     + F+
Sbjct: 206 MRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFM 265

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            S+LI MY KCG    A  +F+ +++K  V WN+MI G+ QNG S EAI LF  M ++  
Sbjct: 266 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D++T +  + AC++IG L+ GK V       G + D+Y+ TAL DMYAKCG L  A R
Sbjct: 326 APDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFR 385

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG--IKPNEVTFMNILWACSHS 613
           VF  M ++N VSW+AMI     HGQ  +A +LFK M++ G  + PN++TF+ +L AC H+
Sbjct: 386 VFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V+EG+  F+ M   FG+ P ++HY+CMVDL SR+G +E A+  + +MP   +  I GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C+  K ID+ + + K L     +++G Y + S +YA    WD+  ++R +M+  G+
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565

Query: 733 KKVPGYSTI 741
            K PG S I
Sbjct: 566 SKTPGCSWI 574



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 243/456 (53%), Gaps = 22/456 (4%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L + C ++++L ++HA LL   +H   P S   +   A++     + + F    +P  + 
Sbjct: 38  LLQQCLSIKQLKQIHAQLLTNSIH--KPNS--FLYKIADLKDFAYASVFFSNILDPTEYS 93

Query: 63  WAVLIK--CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + V+I+     WN     ++  Y +M       +N  YP +  ACS+L  + +G   H  
Sbjct: 94  FNVMIRGLSTAWNKS-SLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I+ G D+D  +  S++  Y   G + DARKVFD+++ +D+VSW+S+I+ Y       E 
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M+  G +P+ ++++S+  ACGEL  L+    +   V+  K+ ++  +G++ I M
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCGDL+SA R F  ++K+   +W AMI+ Y ++G  ++A++ F  M      P+ ITL
Sbjct: 273 YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITL 332

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           I +L +CA +G L  GK V      +G   +  Y+G AL++ YA+CG +    +V + + 
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDV-YVGTALVDMYAKCGSLDNAFRVFYGMP 391

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVGSLQLG 418
           ++N +SWN +IS  A  G ++EAL L   M   G  + P+  +    LSAC + G +  G
Sbjct: 392 KKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEG 451

Query: 419 LQI-------HGHVIKIDCKDEFVQSSLIDMYSKCG 447
            ++        G V KI+       S ++D++S+ G
Sbjct: 452 RRLFHMMSSSFGLVPKIEH-----YSCMVDLFSRAG 482


>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
 gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
          Length = 806

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 213/736 (28%), Positives = 372/736 (50%), Gaps = 21/736 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L R C N R L    R+HAH++   L  +      + + YA      ++  +FD   +  
Sbjct: 56  LLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRR 115

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W VL+K ++  +   +++ LY +M  E    S   +   + AC  + DL  G  +H 
Sbjct: 116 PFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIHY 175

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+   G   +  IQ++++  Y + G +D A   FD         W++I+++         
Sbjct: 176 RV-ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRR 234

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNS 236
            +++F  M  E  +    +      AC     LR    IH  +   + +I G    + N+
Sbjct: 235 AIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKI---QSEIHGTRVLVLNA 289

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY +CG L  A R F  +  R   SWT+MI+   +SG +  A++ F  M+     PN
Sbjct: 290 LISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPN 349

Query: 297 LITLITVLGSCAGLGW---LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             T  +V+ + A LG    L  G+ +H QI   G+  +   +  +LI  YA  G ++E  
Sbjct: 350 EKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDAD-PIVQNSLINMYARSGLLAEAR 408

Query: 354 KVIHAIGE--RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
           +V  +I E  + ++S+  +I+ YA  G  ++ALE+  +M   G+ P+  + A+ L+AC  
Sbjct: 409 EVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVA 468

Query: 412 VGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           +G L  G  IH  +I+  +D  D F  +SL+DMY+KCG    A  +FE ++ K +V W +
Sbjct: 469 IGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTT 528

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I    Q+GN+  A++L+ +M  + +  D  T  T + AC+N+G L  G+ +H + +   
Sbjct: 529 IIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSK 588

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           + +D +   AL  MYAKCG L+ A R++      +V +W++M+  +   G  + A  L+ 
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYA 648

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRS 648
           +M   G++PNEVTF+ +L +CS +G V EG+ +F+++   +G +P  +H+ CMVD+L R+
Sbjct: 649 EMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRA 708

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G +  A +++ SMPF  +   W +LL+ C++H   ++     + L          +  LS
Sbjct: 709 GKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALS 768

Query: 709 NIYAEEGNWDEFGKVR 724
            IYA  G   +  +++
Sbjct: 769 QIYAAAGRNSDIDEIK 784



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 173/589 (29%), Positives = 293/589 (49%), Gaps = 15/589 (2%)

Query: 78  ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
           +  LL    +R ++T    +Y ++LR C +   L  G +VH  I+     ++ ++   + 
Sbjct: 33  DDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVF 92

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
             Y    C D A  +FD M  R    W+ ++  +       + L+++  M  E  +P   
Sbjct: 93  QMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSAC 152

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
             +    ACG +  L   RSIH  V   +  I+  + ++ + MY++CG +  A   F   
Sbjct: 153 GFMWAIVACGRIKDLAQGRSIHYRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDN 211

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +  T  W A++S    +G  ++A+E F +M   + + +  +    LG+CA  G LR G 
Sbjct: 212 RELGTAPWNAIMSALAGAGHHRRAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGI 269

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H +I  +  G     L  ALI  Y  CGK+ E  +V   +  RN++SW  +I+  A+ 
Sbjct: 270 QIHDKIQSEIHGTRVLVLN-ALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQS 328

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS---LQLGLQIHGHVIK--IDCKD 432
           G    A++L   M   G+ P+  + AS +SA  ++G    L  G +IH  +    ID  D
Sbjct: 329 GHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDA-D 387

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
             VQ+SLI+MY++ G    A  +F+ I    K+VV + +MI  +  NG+  +A+ +F +M
Sbjct: 388 PIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREM 447

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV-RKDIYIDTALTDMYAKCGD 549
               +  +E+TF T + AC  IG L  G W+H ++I  G+   D +   +L DMYAKCGD
Sbjct: 448 TARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGD 507

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A RVF++M  +++V+W+ +I      G    A  L+ +ML SGI P+  T   +L A
Sbjct: 508 LGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVA 567

Query: 610 CSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           C++ G +  G K +  A+R   +E D      +  + ++ G +E A ++
Sbjct: 568 CANLGDLAMGEKIHRQALR-SKLEQDAHFQNALAAMYAKCGSLEKATRL 615


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 190/572 (33%), Positives = 322/572 (56%), Gaps = 9/572 (1%)

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           + ++S  L++  S+    +    V   SL + C ++ +      IH HV++  ++ D  +
Sbjct: 37  SGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFV 96

Query: 234 GNSFIVMYSKCG-DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           GNS + +Y K G D     + F  +  +   SWT+MIS Y R G    +LE F KML   
Sbjct: 97  GNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYG 156

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            EPN  TL  V+ +C+ LG L+ G+  H  ++ +G    Y  +  ALI+ +     + + 
Sbjct: 157 VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNY-VIASALIDMHGRNCALDDA 215

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGN 411
            ++   + E + + W  +IS   R     EAL     MQ   G+ PD F+  + L+ACGN
Sbjct: 216 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 275

Query: 412 VGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           +G L+ G ++H  VI    C +  V+SSL+DMY KCG    +  +F+R+  K+ V W+++
Sbjct: 276 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSAL 335

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           + G+ QNG+    I +F +M     ++D   F T ++ C+ +  + +GK VH + I  G 
Sbjct: 336 LGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 391

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            +D+ +++AL D+YAKCG ++ AQ +FD M  RN+++W++MI  +  +G+  +A  +F Q
Sbjct: 392 WRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQ 451

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M+  GIKP+ ++F+ IL+ACSH G V+EG+ YF +M + +G++  ++HY+CMVDLL R+G
Sbjct: 452 MVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAG 511

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            +E A  +I +  F  + S+W ALL  C      ++ + I K +     + +  Y LL+N
Sbjct: 512 LLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLAN 571

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +Y   G W++  ++R +M+  G+ K+PG S I
Sbjct: 572 VYKAVGRWNDALRIRRLMKDRGVNKMPGKSWI 603



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 260/481 (54%), Gaps = 10/481 (2%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC-LDDARKVFDK 155
           +Y S+L+ C+ +     G ++H  +IK G + D  +  S+L  Y + G    + RKVFD 
Sbjct: 61  LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 120

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           +  +DV+SW+S+I+ Y         L++F  M+  GVEP+  T+ ++ +AC EL  L+  
Sbjct: 121 LFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLG 180

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R  HG VL R    +  + ++ I M+ +   L  A + F ++ +     WT++IS   R+
Sbjct: 181 RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRN 240

Query: 276 GWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            +F +AL  F  M       P+  T  TVL +C  LG L++GK VH ++I  G       
Sbjct: 241 DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV-V 299

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +L++ Y +CG + E +++   +  +N +SW+ L+  Y + G  K  +++  +M+   
Sbjct: 300 VESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK-- 357

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAY 453
              D +   + L  C  + +++ G ++H   I K   +D  V+S+L+D+Y+KCG    A 
Sbjct: 358 --VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQ 415

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F+++  ++++ WNSMI GF QNG   EA+ +F+QM    ++ D ++F+  + ACS+ G
Sbjct: 416 TIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRG 475

Query: 514 QLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAM 571
            +++G+     +   YG++  I   + + D+  + G L+ A+ + ++   R+  S W+A+
Sbjct: 476 LVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAAL 535

Query: 572 I 572
           +
Sbjct: 536 L 536



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 246/465 (52%), Gaps = 18/465 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGS-LRSSRLVFDTFKEP 58
           L ++CT +       ++HAH++ +GL +D      L+  Y ++G+    +R VFD     
Sbjct: 65  LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 124

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  +I  Y+       S+ L+ KM+      + F   +V++ACS LGDL  G   H
Sbjct: 125 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 184

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++  GFD + VI ++++  +G    LDDAR++FD++   D + W+SII++   N    
Sbjct: 185 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 244

Query: 179 EGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           E L+ F+SM R+ G+ PD  T  ++  ACG L  L+  + +H  V+      +  + +S 
Sbjct: 245 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 304

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCG +  ++R F ++  + + SW+A++  Y ++G F+  ++ F KM    E+ +L
Sbjct: 305 VDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDL 360

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
               T+L +CAGL  +R+GK VHCQ IRKG G     +  AL++ YA+CG +   + +  
Sbjct: 361 YCFGTILRTCAGLAAVRQGKEVHCQYIRKG-GWRDVIVESALVDLYAKCGCIEYAQTIFD 419

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  RN+++WN +I  +A+ G  +EAL +  QM   G+ PD  S    L AC + G +  
Sbjct: 420 QMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDE 479

Query: 418 GLQ-----IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           G +        + IK+  +     S ++D+  + G    A +L E
Sbjct: 480 GREYFISMTKDYGIKVGIEH---YSCMVDLLGRAGLLEEAEILIE 521



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 4/309 (1%)

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           I +  + G    AL+LL  +    +       AS L  C  V +   GLQIH HVIK   
Sbjct: 31  ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 90

Query: 431 K-DEFVQSSLIDMYSKCGFK-NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           + D FV +SL+ +Y K G        +F+ +  K V+ W SMI G+ + G  + ++ LF 
Sbjct: 91  EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 150

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M    +E +  T    I+ACS +G L+ G+  H  ++  G   +  I +AL DM+ +  
Sbjct: 151 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNC 210

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LDSGIKPNEVTFMNIL 607
            L  A+++FD + E + + W+++I     +   ++A   F  M  D G+ P+  TF  +L
Sbjct: 211 ALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVL 270

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC + G +++GK     +   G   ++   + +VD+  + G +  + ++   MP   N 
Sbjct: 271 TACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK-NS 329

Query: 668 SIWGALLNG 676
             W ALL G
Sbjct: 330 VSWSALLGG 338


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 190/572 (33%), Positives = 322/572 (56%), Gaps = 9/572 (1%)

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           + ++S  L++  S+    +    V   SL + C ++ +      IH HV++  ++ D  +
Sbjct: 96  SGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFV 155

Query: 234 GNSFIVMYSKCG-DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           GNS + +Y K G D     + F  +  +   SWT+MIS Y R G    +LE F KML   
Sbjct: 156 GNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYG 215

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            EPN  TL  V+ +C+ LG L+ G+  H  ++ +G    Y  +  ALI+ +     + + 
Sbjct: 216 VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNY-VIASALIDMHGRNCALDDA 274

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSACGN 411
            ++   + E + + W  +IS   R     EAL     MQ   G+ PD F+  + L+ACGN
Sbjct: 275 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 334

Query: 412 VGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           +G L+ G ++H  VI    C +  V+SSL+DMY KCG    +  +F+R+  K+ V W+++
Sbjct: 335 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSAL 394

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           + G+ QNG+    I +F +M     ++D   F T ++ C+ +  + +GK VH + I  G 
Sbjct: 395 LGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 450

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            +D+ +++AL D+YAKCG ++ AQ +FD M  RN+++W++MI  +  +G+  +A  +F Q
Sbjct: 451 WRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQ 510

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M+  GIKP+ ++F+ IL+ACSH G V+EG+ YF +M + +G++  ++HY+CMVDLL R+G
Sbjct: 511 MVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAG 570

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            +E A  +I +  F  + S+W ALL  C      ++ + I K +     + +  Y LL+N
Sbjct: 571 LLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLAN 630

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +Y   G W++  ++R +M+  G+ K+PG S I
Sbjct: 631 VYKAVGRWNDALRIRRLMKDRGVNKMPGKSWI 662



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 260/481 (54%), Gaps = 10/481 (2%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC-LDDARKVFDK 155
           +Y S+L+ C+ +     G ++H  +IK G + D  +  S+L  Y + G    + RKVFD 
Sbjct: 120 LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 179

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           +  +DV+SW+S+I+ Y         L++F  M+  GVEP+  T+ ++ +AC EL  L+  
Sbjct: 180 LFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLG 239

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R  HG VL R    +  + ++ I M+ +   L  A + F ++ +     WT++IS   R+
Sbjct: 240 RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRN 299

Query: 276 GWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            +F +AL  F  M       P+  T  TVL +C  LG L++GK VH ++I  G       
Sbjct: 300 DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV-V 358

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +L++ Y +CG + E +++   +  +N +SW+ L+  Y + G  K  +++  +M+   
Sbjct: 359 VESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK-- 416

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAY 453
              D +   + L  C  + +++ G ++H   I K   +D  V+S+L+D+Y+KCG    A 
Sbjct: 417 --VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQ 474

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F+++  ++++ WNSMI GF QNG   EA+ +F+QM    ++ D ++F+  + ACS+ G
Sbjct: 475 TIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRG 534

Query: 514 QLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAM 571
            +++G+     +   YG++  I   + + D+  + G L+ A+ + ++   R+  S W+A+
Sbjct: 535 LVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAAL 594

Query: 572 I 572
           +
Sbjct: 595 L 595



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 246/465 (52%), Gaps = 18/465 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGS-LRSSRLVFDTFKEP 58
           L ++CT +       ++HAH++ +GL +D      L+  Y ++G+    +R VFD     
Sbjct: 124 LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 183

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  +I  Y+       S+ L+ KM+      + F   +V++ACS LGDL  G   H
Sbjct: 184 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 243

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++  GFD + VI ++++  +G    LDDAR++FD++   D + W+SII++   N    
Sbjct: 244 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 303

Query: 179 EGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           E L+ F+SM R+ G+ PD  T  ++  ACG L  L+  + +H  V+      +  + +S 
Sbjct: 304 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 363

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCG +  ++R F ++  + + SW+A++  Y ++G F+  ++ F KM    E+ +L
Sbjct: 364 VDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDL 419

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
               T+L +CAGL  +R+GK VHCQ IRKG G     +  AL++ YA+CG +   + +  
Sbjct: 420 YCFGTILRTCAGLAAVRQGKEVHCQYIRKG-GWRDVIVESALVDLYAKCGCIEYAQTIFD 478

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  RN+++WN +I  +A+ G  +EAL +  QM   G+ PD  S    L AC + G +  
Sbjct: 479 QMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDE 538

Query: 418 GLQ-----IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           G +        + IK+  +     S ++D+  + G    A +L E
Sbjct: 539 GREYFISMTKDYGIKVGIEH---YSCMVDLLGRAGLLEEAEILIE 580



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 4/309 (1%)

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           I +  + G    AL+LL  +    +       AS L  C  V +   GLQIH HVIK   
Sbjct: 90  ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 149

Query: 431 K-DEFVQSSLIDMYSKCGFK-NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           + D FV +SL+ +Y K G        +F+ +  K V+ W SMI G+ + G  + ++ LF 
Sbjct: 150 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 209

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M    +E +  T    I+ACS +G L+ G+  H  ++  G   +  I +AL DM+ +  
Sbjct: 210 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNC 269

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LDSGIKPNEVTFMNIL 607
            L  A+++FD + E + + W+++I     +   ++A   F  M  D G+ P+  TF  +L
Sbjct: 270 ALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVL 329

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
            AC + G +++GK     +   G   ++   + +VD+  + G +  + ++   MP   N 
Sbjct: 330 TACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPI-KNS 388

Query: 668 SIWGALLNG 676
             W ALL G
Sbjct: 389 VSWSALLGG 397


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 216/707 (30%), Positives = 366/707 (51%), Gaps = 8/707 (1%)

Query: 42  MGSLRSSRLVFDTFKEPDSFM-WAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYP 99
           +G L  +R +      P S + W  +I  Y   +  E  +  LY  M       +   + 
Sbjct: 145 LGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFA 204

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L A ++      G +VH   ++ G D +  + +S++  Y + GC+ DA  VFD    +
Sbjct: 205 SMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK 264

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           +VV W++++     N    E ++MF  M R G+E D  T +S+  AC  L S    R + 
Sbjct: 265 NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQ 324

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              ++  +     + N+ + M+SK G +  A+  F  I  + T SW A++     +   +
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDE 384

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +A+     M      P+ ++  TV+ +C+ +     GK +HC  ++  +   +  +G +L
Sbjct: 385 EAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNH-AVGSSL 443

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           I+FY++ G +  C KV+  +   +I+  N+LI+   +     EA++L  Q+   GL P S
Sbjct: 444 IDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSS 503

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLA-YLLF 456
           F+ +S LS C  + S  +G Q+H + +K      D  V  SL+  Y K      A  LL 
Sbjct: 504 FTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLI 563

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E    K++V W +++ G+ QNG S +++  F +M    +  DEVTF + ++ACS +  L 
Sbjct: 564 EMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALS 623

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCY 575
            GK +H  +I  G        +A+ DMY+KCGD+ ++   F  + S++++  W++MI  +
Sbjct: 624 DGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGF 683

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             +G  ++A  LF++M DS IK +EVTF+ +L AC+H+G + EG+ YF++M +++G+ P 
Sbjct: 684 AKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPR 743

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           + HYAC +DLL R G ++ A ++I+ +PF  +G IW   L  CR+HK  +  +   KEL 
Sbjct: 744 VDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELV 803

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                ++  Y LLSN+YA  GNW E    R  M   G  K PG S I
Sbjct: 804 ELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWI 850



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/619 (27%), Positives = 308/619 (49%), Gaps = 8/619 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA  +  GL  +    + LI  YA+ G +  + LVFD   E +  MW  ++   + N 
Sbjct: 221 QVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNE 280

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           +  E+I ++  M R       F Y SVL AC+ L     G +V    IK   D    +  
Sbjct: 281 YQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVAN 340

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  + +FG +DDA+ +F+ +T +D VSW++++     N +  E + M   M  +GV P
Sbjct: 341 ATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTP 400

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D V+  ++  AC  + +    + IH   ++  I  +  +G+S I  YSK GD+ S  +  
Sbjct: 401 DEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVL 460

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +++         +I+   ++    +A++ F ++L    +P+  T  ++L  C GL    
Sbjct: 461 AQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSI 520

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK-VIHAIGERNILSWNMLISE 373
            GK VHC  ++ G   +   +G +L+  Y +     +  K +I     +N++ W  ++S 
Sbjct: 521 IGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSG 580

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD- 432
           YA+ G S ++L    +M+++ + PD  + AS L AC  + +L  G +IHG +IK      
Sbjct: 581 YAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSY 640

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMY 491
           +   S++IDMYSKCG    ++  F+ ++ K  + +WNSMI GF +NG + EA+ LF +M 
Sbjct: 641 KTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQ 700

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
            + ++ DEVTFL  + AC++ G + +G+     +   YG+   +       D+  + G L
Sbjct: 701 DSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHL 760

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILW 608
           Q AQ V + +  R + V W+  +    MH          K++++  ++P N  T++ +  
Sbjct: 761 QEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVE--LEPQNSSTYVLLSN 818

Query: 609 ACSHSGSVEEGKFYFNAMR 627
             + +G+  E K    AMR
Sbjct: 819 MYAAAGNWVEAKMAREAMR 837



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 170/679 (25%), Positives = 307/679 (45%), Gaps = 44/679 (6%)

Query: 6   SCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C+ L  L    + H      GL      +  L+  YA  G +  +R VF     PD+  
Sbjct: 40  ACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVC 99

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           WA +I  Y     F+E++ L+ +M                                    
Sbjct: 100 WASMISGYHRAGRFQEAVCLFTRM-----------------------------------E 124

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVS-EG 180
           K G   D V   +++C     G L+DAR +  +M +    V+W+++I+ Y   + +  E 
Sbjct: 125 KMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEV 184

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
             ++  M   G+ P   T  S+  A     +    R +H   +R  +  +  +G+S I +
Sbjct: 185 FGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINL 244

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG +  A   F    ++    W AM++   R+ +  +A++ F+ M  +  E +  T 
Sbjct: 245 YAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTY 304

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++VLG+CA L     G+ V C  I+  M     ++  A ++ +++ G + + + + + I 
Sbjct: 305 VSVLGACAHLDSHCLGRQVQCVTIKNCMDASL-FVANATLDMHSKFGAIDDAKTLFNLIT 363

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            ++ +SWN L+         +EA+ +L  M   G+ PD  S A+ ++AC N+ + + G Q
Sbjct: 364 YKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQ 423

Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IH   +K   C +  V SSLID YSK G       +  ++   S+V  N +I G  QN  
Sbjct: 424 IHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNR 483

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH-HKLISYGVRKDIYIDT 538
             EAI+LF Q+  + L+    TF + +  C+ +     GK VH + L S  +  D  +  
Sbjct: 484 EDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGV 543

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           +L   Y K    + A ++   M + +N+V W+A++  Y  +G    +   F +M    + 
Sbjct: 544 SLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVH 603

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+EVTF +IL ACS   ++ +GK     +   G        + ++D+ S+ GDI  +F+ 
Sbjct: 604 PDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEA 663

Query: 658 IHSMPFPANGSIWGALLNG 676
              +    + ++W +++ G
Sbjct: 664 FKELKSKQDITLWNSMILG 682



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 168/586 (28%), Positives = 277/586 (47%), Gaps = 40/586 (6%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F   + L ACS LG L SG++ H    K G         +++  Y   G + DAR+VF 
Sbjct: 31  QFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFG 90

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            ++  D V W+S+I+ Y       E + +F  M + G  PD VT +++  A   L  L  
Sbjct: 91  GISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLED 150

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY-N 273
           AR++    L R      P  +S                         T +W A+IS Y  
Sbjct: 151 ARTL----LHRM-----PAPSS-------------------------TVAWNAVISGYAQ 176

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +SG   +    +  M      P   T  ++L + A      EG+ VH   +R G+     
Sbjct: 177 QSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANV- 235

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           ++G +LI  YA+CG + +   V    GE+N++ WN +++   R     EA+++ + M+  
Sbjct: 236 FVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRL 295

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNL 451
           GL  D F+  S L AC ++ S  LG Q+    IK +C D   FV ++ +DM+SK G  + 
Sbjct: 296 GLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIK-NCMDASLFVANATLDMHSKFGAIDD 354

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  LF  I  K  V WN+++ G   N    EAI++   M L+ +  DEV+F T I ACSN
Sbjct: 355 AKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSN 414

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           I   E GK +H   + + +  +  + ++L D Y+K GD+++ ++V   +   ++V  + +
Sbjct: 415 IRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVL 474

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFG 630
           I     + + ++A  LF+Q+L  G+KP+  TF +IL  C+   S   GK  +   ++   
Sbjct: 475 IAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGF 534

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +  D      +V    ++   E A K++  MP   N   W A+++G
Sbjct: 535 LNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSG 580



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 248/509 (48%), Gaps = 44/509 (8%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           GV PD   + +   AC  L +L   +  H    +R +        + + MY++CG +  A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
            R F  I    T  W +MIS Y+R+G FQ+A+  F +M ++   P+ +T + V+ +   L
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G L + ++    ++ +   P                                + ++WN +
Sbjct: 146 GRLEDART----LLHRMPAPS-------------------------------STVAWNAV 170

Query: 371 ISEYARK-GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-- 427
           IS YA++ G+  E   L   M+ WGL P   + AS LSA  N  +   G Q+H   ++  
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHG 230

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
           +D  + FV SSLI++Y+KCG    A L+F+   +K+VVMWN+M+ G  +N   +EAI +F
Sbjct: 231 LD-ANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMF 289

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M    LE DE T+++ + AC+++     G+ V    I   +   +++  A  DM++K 
Sbjct: 290 LYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKF 349

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G +  A+ +F+ ++ ++ VSW+A++     + +  +A  + K M   G+ P+EV+F  ++
Sbjct: 350 GAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVI 409

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI----HSMPF 663
            ACS+  + E GK          +  +    + ++D  S+ GD+E   K++     S   
Sbjct: 410 NACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIV 469

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P N  I G + N  R  + ID+ + + ++
Sbjct: 470 PRNVLIAGLVQNN-REDEAIDLFQQVLRD 497



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 40/400 (10%)

Query: 282 LESFVKMLEVKE----EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           L++FV+           P+   L   L +C+ LG L  GK  HC   ++G+G    +   
Sbjct: 12  LDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGA-FCAA 70

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL+  YA CG++ +  +V   I   + + W  +IS Y R G  +EA+ L  +M+  G  P
Sbjct: 71  ALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSP 130

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           D  +  + + A   +G L+                                 +   LL  
Sbjct: 131 DRVTCVAVVCALTALGRLE---------------------------------DARTLLHR 157

Query: 458 RIQQKSVVMWNSMICGF-YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
                S V WN++I G+  Q+G   E   L+  M    L     TF + + A +N     
Sbjct: 158 MPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFI 217

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +G+ VH   + +G+  ++++ ++L ++YAKCG +  A  VFD   E+NVV W+AM++   
Sbjct: 218 EGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLV 277

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            +    +A  +F  M   G++ +E T++++L AC+H  S   G+          ++  L 
Sbjct: 278 RNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLF 337

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                +D+ S+ G I+ A  + + + +    S W ALL G
Sbjct: 338 VANATLDMHSKFGAIDDAKTLFNLITYKDTVS-WNALLVG 376


>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
 gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
          Length = 1260

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 199/587 (33%), Positives = 319/587 (54%), Gaps = 8/587 (1%)

Query: 161  VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            V +W+  I    +  D  E L +F  M R G EP+  T   +A+AC  L  +     +H 
Sbjct: 623  VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 682

Query: 221  HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            H+++     D  +G + + M+ KC  +  A + F ++ +R  T+W AM+S + +SG   K
Sbjct: 683  HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 742

Query: 281  ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            A   F +M   +  P+ +T++T++ S +    L+  +++H   IR G+  +   +    I
Sbjct: 743  AFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV-TVANTWI 801

Query: 341  EFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
              Y +CG +   + V  AI  G+R ++SWN +   Y+  G + +A  L   M      PD
Sbjct: 802  STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 861

Query: 399  SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS--SLIDMYSKCGFKNLAYLLF 456
              +  +  ++C N  +L  G  IH H I +   D+ +++  + I MYSK      A LLF
Sbjct: 862  LSTFINLAASCQNPETLTQGRLIHSHAIHLGT-DQDIEAINTFISMYSKSEDTCSARLLF 920

Query: 457  ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
            + +  ++ V W  MI G+ + G+  EA+ LFH M  +  + D VT L+ I  C   G LE
Sbjct: 921  DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 980

Query: 517  KGKWVHHKLISYGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             GKW+  +   YG ++D + I  AL DMY+KCG +  A+ +FD+  E+ VV+W+ MI  Y
Sbjct: 981  TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 1040

Query: 576  GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPD 634
             ++G   +A  LF +M+D   KPN +TF+ +L AC+HSGS+E+G  YF+ M+ ++ + P 
Sbjct: 1041 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 1100

Query: 635  LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
            L HY+CMVDLL R G +E A ++I +M    +  IWGALLN C+IH+ + + +   + L 
Sbjct: 1101 LDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLF 1160

Query: 695  VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                     Y  ++NIYA  G WD F ++RSIM+   +KK PG S I
Sbjct: 1161 NLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 1207



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 177/604 (29%), Positives = 291/604 (48%), Gaps = 42/604 (6%)

Query: 63   WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
            W + I+  +  N   ES+LL+ +M R     +NF +P V +AC+ L D+G  E VH  +I
Sbjct: 626  WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 685

Query: 123  KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
            K  F  D  + T+ +  + +   +D A KVF++M  RD  +W+++++ +  +    +   
Sbjct: 686  KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 745

Query: 183  MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
            +F  M    + PD VT+++L ++     SL+   ++H   +R  + +   + N++I  Y 
Sbjct: 746  LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 805

Query: 243  KCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            KCGDL SA+  F  I++  R   SW +M   Y+  G    A   +  ML  + +P+L T 
Sbjct: 806  KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 865

Query: 301  ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            I +  SC     L +G+ +H   I  G   + + +    I  Y++         +   + 
Sbjct: 866  INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAIN-TFISMYSKSEDTCSARLLFDIMT 924

Query: 361  ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             R  +SW ++IS YA KG   EAL L   M   G  PD  ++ S +S CG  GSL+ G  
Sbjct: 925  SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 984

Query: 421  IHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            I        CK + V   ++LIDMYSKCG  + A  +F+   +K+VV W +MI G+  NG
Sbjct: 985  IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 1044

Query: 479  NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              LEA+ LF +M     + + +TFL  +QAC++ G LEKG W +     + + K +Y  +
Sbjct: 1045 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEY-----FHIMKQVYNIS 1098

Query: 539  ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
               D Y                        S M+D  G  G+L +A  L + M     KP
Sbjct: 1099 PGLDHY------------------------SCMVDLLGRKGKLEEALELIRNM---SAKP 1131

Query: 599  NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL-QHYACMVDLLSRSGDIEGAFKM 657
            +   +  +L AC    +V+  +    A  +F +EP +   Y  M ++ + +G  +G F  
Sbjct: 1132 DAGIWGALLNACKIHRNVKIAEQA--AESLFNLEPQMAAPYVEMANIYAAAGMWDG-FAR 1188

Query: 658  IHSM 661
            I S+
Sbjct: 1189 IRSI 1192



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 232/496 (46%), Gaps = 16/496 (3%)

Query: 16   LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            +HAHL+ +    D    T  ++ + +  S+  +  VF+   E D+  W  ++  +  +  
Sbjct: 680  VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 739

Query: 76   FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             +++  L+ +M   + T  +    +++++ S    L   E +H   I+ G D    +  +
Sbjct: 740  TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 799

Query: 136  ILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
             + TYG+ G LD A+ VF+ +    R VVSW+S+  +Y    +  +   ++  M+RE  +
Sbjct: 800  WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 859

Query: 194  PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            PD  T ++LA +C    +L   R IH H +      D    N+FI MYSK  D  SA   
Sbjct: 860  PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 919

Query: 254  FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
            F  +  R   SWT MIS Y   G   +AL  F  M++  E+P+L+TL++++  C   G L
Sbjct: 920  FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 979

Query: 314  REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
              GK +  +    G   +   +  ALI+ Y++CG + E   +     E+ +++W  +I+ 
Sbjct: 980  ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAG 1039

Query: 374  YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDC 430
            YA  G+  EAL+L  +M      P+  +  + L AC + GSL+ G     I   V  I  
Sbjct: 1040 YALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISP 1099

Query: 431  K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV-MWNSMI--CGFYQNGNSLEA--- 483
              D +  S ++D+  + G    A  L   +  K    +W +++  C  ++N    E    
Sbjct: 1100 GLDHY--SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 1157

Query: 484  --INLFHQMYLNCLEM 497
               NL  QM    +EM
Sbjct: 1158 SLFNLEPQMAAPYVEM 1173



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 155/294 (52%), Gaps = 3/294 (1%)

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           G  ++ +WN+ I E   +    E+L L  +M+  G  P++F+      AC  +  +    
Sbjct: 619 GLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCE 678

Query: 420 QIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H H+IK     D FV ++ +DM+ KC   + A  +FER+ ++    WN+M+ GF Q+G
Sbjct: 679 MVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 738

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           ++ +A +LF +M LN +  D VT +T IQ+ S    L+  + +H   I  GV   + +  
Sbjct: 739 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 798

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                Y KCGDL +A+ VF+++   +R VVSW++M   Y + G+  DA  L+  ML    
Sbjct: 799 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 858

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           KP+  TF+N+  +C +  ++ +G+   +     G + D++     + + S+S D
Sbjct: 859 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 912



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 180/365 (49%), Gaps = 12/365 (3%)

Query: 1    MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
            M L +S +   +L+ L  +HA  +  G+      +   I +Y + G L S++LVF+    
Sbjct: 763  MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 822

Query: 58   PDSFM--WAVLIKCYMWNNFFEESILLYHKMIREQ--ATISNFIYPSVLRACSSLGDLGS 113
             D  +  W  + K Y       ++  LY  M+RE+    +S FI  ++  +C +   L  
Sbjct: 823  GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI--NLAASCQNPETLTQ 880

Query: 114  GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
            G  +H   I  G D+D     + +  Y +      AR +FD MTSR  VSW+ +I+ Y +
Sbjct: 881  GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 940

Query: 174  NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
              D+ E L +FH+M++ G +PD VT+LSL   CG+  SL   + I         K D  +
Sbjct: 941  KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 1000

Query: 234  -GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
              N+ I MYSKCG +  A   F    ++   +WT MI+ Y  +G F +AL+ F KM+++ 
Sbjct: 1001 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 1060

Query: 293  EEPNLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +PN IT + VL +CA  G L +G +  H       + P  D+    +++     GK+ E
Sbjct: 1061 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS-CMVDLLGRKGKLEE 1119

Query: 352  CEKVI 356
              ++I
Sbjct: 1120 ALELI 1124


>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
 gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 209/704 (29%), Positives = 350/704 (49%), Gaps = 14/704 (1%)

Query: 25  LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYH 84
           L  D P +  ++  Y +      +  VF   +E D   W   I     +  +  ++ L  
Sbjct: 131 LESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLK 190

Query: 85  KMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG 144
            M  E        + S L AC     L +G  +H  +++ G + D V+ T+++  YG  G
Sbjct: 191 SMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCG 250

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLA 203
           CL+ AR++F +M  R+VVSW++++AS   NA  +E +++F  MV    VEP  V+ +++ 
Sbjct: 251 CLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVL 310

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            A     +L   R IH  +  R++     + N+ + MY +CG +  AER F  +E+R   
Sbjct: 311 NAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLV 370

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW AMIS Y +SG  ++ +  F +M   +  P+ IT +  L +CA +  L  G++VH   
Sbjct: 371 SWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLS 430

Query: 324 IRKGMGPEYDYLGPALIEFYAECGK--------MSECEKVIHAIGERNILSWNMLISEYA 375
           +  G G     +  A +  Y+ C          M     +  ++  R+++SWN +I+ Y 
Sbjct: 431 VESGFGSCIS-VANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYV 489

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID---CKD 432
           + G S  AL +  +M   G+  +  +  S LS C +   L+ G  IH  VI        D
Sbjct: 490 QAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSD 549

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V +++++MY KCG  + A  LFE    +++  WNSMI  +  +G + +A +L  +M  
Sbjct: 550 PIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRR 609

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +  D VTF+T + AC   G +  GK +H ++I  G+ KD  +  AL + Y+KCG+L T
Sbjct: 610 EGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDT 669

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A  +F ++  R+VVSW+ +I  +  +G   +A      M   G++P+ +TF+ IL A SH
Sbjct: 670 ATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSH 729

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G + +G   F +M +   +E  ++HY CM+DLL R+G I  A   + +M        W 
Sbjct: 730 AGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEVSWM 789

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
            LL+ C +H   +  K +   +       +  Y  LSN+YA  G
Sbjct: 790 TLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALSNLYATCG 833



 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 205/697 (29%), Positives = 350/697 (50%), Gaps = 27/697 (3%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPA---STRLIESYAEMGSLRSSRLVFDTFK 56
           L R+C     L +  R+H H+     H D  +     RL+  Y    SL  +R VFD  +
Sbjct: 4   LMRACGISGALEQGRRVHGHV---QRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E D   W  +I  Y       +++ L+ +M       +   + ++L AC S   L  G++
Sbjct: 61  ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQ 120

Query: 117 VHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +H R+      + DV +  +++  Y +    D A  VF +M  RD++SW++ IA+  ++ 
Sbjct: 121 IHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESG 180

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D +  L +  SM  EG+ PD VT +S   AC    SL   R IH  VL R ++ D  LG 
Sbjct: 181 DYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGT 240

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-E 294
           + + MY +CG L SA   F ++ +R   SW AM++    +  F +A+E F +M+ V   E
Sbjct: 241 ALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVE 300

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P  ++ ITVL +      L EG+ +H  I  + +  + + +  AL+  Y  CG + + E+
Sbjct: 301 PTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIE-VANALVTMYGRCGGVGDAER 359

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V  A+  R+++SWN +IS YA+ G+++E + L  +M+   + PD  +   +L AC  +  
Sbjct: 360 VFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRD 419

Query: 415 LQLGLQIH--------GHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           L  G  +H        G  I + +       S      S      +   +FE +  + V+
Sbjct: 420 LDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVI 479

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN+MI G+ Q G+S  A+++F +M L  +  ++VTF++ +  C +   L +G+ +H ++
Sbjct: 480 SWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRV 539

Query: 526 ISYG--VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
           I+    +  D  +  A+ +MY KCG+L TA+ +F+  S RN+ SW++MI  Y +HG+   
Sbjct: 540 INQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQ 599

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
           A  L ++M   G+ P+ VTF+ +L AC   G+V  GK     +   G+E D      +V+
Sbjct: 600 AFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVN 659

Query: 644 LLSRSGDIEGAFKMIHSMPFPA----NGSIWGALLNG 676
             S+ G+++ A  +  ++ +      NG I G   NG
Sbjct: 660 FYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNG 696



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 175/602 (29%), Positives = 300/602 (49%), Gaps = 19/602 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  ++RAC   G L  G +VHG + +   D+       ++  Y     LD+ARKVFD+M 
Sbjct: 1   YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDVVSW+++I++Y       + L +F  M    ++P+ VT L+L EAC     L   + 
Sbjct: 61  ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQ 120

Query: 218 IHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           IH  V   + ++ D P+ N+ + MY KC     A   F ++ +R   SW   I+    SG
Sbjct: 121 IHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESG 180

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            +   L     M      P+ +T ++ L +C G   L  G+ +H  ++ +GM  +   LG
Sbjct: 181 DYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDV-VLG 239

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL+  Y  CG +    ++ H + ERN++SWN +++         EA+EL  +M    ++
Sbjct: 240 TALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMV 299

Query: 397 -PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYL 454
            P   S  + L+A     +L  G +IH  + +     +  V ++L+ MY +CG    A  
Sbjct: 300 EPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAER 359

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F  ++++ +V WN+MI  + Q+G + E +NLFH+M    +  D +TFL A+ AC+ I  
Sbjct: 360 VFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRD 419

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD--------LQTAQRVFDSMSERNVV 566
           L+ G+ VHH  +  G    I +  A   +Y+ C          ++    +F+SM+ R+V+
Sbjct: 420 LDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVI 479

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW+ MI  Y   G    A S+FK+ML  GI+ N+VTFM++L  C     + +G+      
Sbjct: 480 SWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHR-- 537

Query: 627 RIFGVEPDLQH----YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           R+    P+L       A +V++  + G+++ A  +        N + W ++++   +H R
Sbjct: 538 RVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHR-NLASWNSMISAYALHGR 596

Query: 683 ID 684
            +
Sbjct: 597 AE 598



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 244/545 (44%), Gaps = 46/545 (8%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+HA +    L      +  L+  Y   G +  +  VF   +  D   W  +I  Y  + 
Sbjct: 324 RIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSG 383

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E + L+H+M  E+       +   L AC+ + DL SG  VH   ++ GF     +  
Sbjct: 384 LAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVAN 443

Query: 135 SILCTY--------GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           + +  Y             ++    +F+ M +RDV+SW+++I  Y    D    L +F  
Sbjct: 444 ATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKR 503

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR--KIKIDGPLGNSFIVMYSKC 244
           M+ EG+  + VT +SL   C     LR   +IH  V+ +  ++  D  +  + + MY KC
Sbjct: 504 MLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKC 563

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G+L +A   F     R   SW +MIS Y   G  ++A +   +M      P+ +T IT+L
Sbjct: 564 GELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLL 623

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C   G +R GK +H +II  G+  +   +  AL+ FY++CG +     +  A+  R++
Sbjct: 624 NACVAGGAVRHGKMIHARIIDSGLEKD-TVVANALVNFYSKCGNLDTATSLFGALDYRDV 682

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SWN +I+ +A  G ++EAL+ +  MQ  G+ PD+ +  + LSA  + G L+ G      
Sbjct: 683 VSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQG------ 736

Query: 425 VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
                  D+FV                  +  +   ++ V  +  MI    + G   +A 
Sbjct: 737 ------GDDFVS-----------------MAVDHELERGVEHYGCMIDLLGRAGRIGDAE 773

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR-KDIYIDTALTDM 543
                M     E  EV+++T + AC   G  E+ K V   ++    +    Y+  AL+++
Sbjct: 774 YFVSAMR---DEDKEVSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYV--ALSNL 828

Query: 544 YAKCG 548
           YA CG
Sbjct: 829 YATCG 833


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 200/549 (36%), Positives = 308/549 (56%), Gaps = 19/549 (3%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           SL + C    S++  + IH  +L   I       NSF+   +   D   A   F  I   
Sbjct: 37  SLLQQC---LSIKQLKQIHAQLLTNSIHKP----NSFLYKIADLKDFAYASVFFSNILDP 89

Query: 261 CTTSWTAMI----SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
              S+  MI    + +N+S     ALE + +M  +  +PN +T   +  +C+ L  +  G
Sbjct: 90  TEYSFNVMIRGLSTAWNKSSL---ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           +  HC +IR+G+  E  ++  +LI  YA CGKM +  KV   I +++++SWN +IS Y++
Sbjct: 147 RMGHCSVIRRGLD-EDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSK 205

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFV 435
              + EA+ L  +M   G  P+  S+ S L ACG +G L+LG  +   V++     + F+
Sbjct: 206 MRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFM 265

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            S+LI MY KCG    A  +F+ +++K  V WN+MI G+ QNG S EAI LF  M ++  
Sbjct: 266 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D++T +  + AC++IG L+ GK V       G + D+Y+ TAL DMYAKCG L  A R
Sbjct: 326 APDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFR 385

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG--IKPNEVTFMNILWACSHS 613
           VF  M  +N VSW+AMI     HGQ  +A +LFK M++ G  + PN++TF+ +L AC H+
Sbjct: 386 VFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V+EG+  F+ M   FG+ P ++HY+CMVDL SR+G +E A+  + +MP   +  I GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C+  K ID+ + + K L     +++G Y + S +YA    WD+  ++R +M+  G+
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565

Query: 733 KKVPGYSTI 741
            K PG S I
Sbjct: 566 SKTPGCSWI 574



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 242/456 (53%), Gaps = 22/456 (4%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L + C ++++L ++HA LL   +H   P S   +   A++     + + F    +P  + 
Sbjct: 38  LLQQCLSIKQLKQIHAQLLTNSIH--KPNS--FLYKIADLKDFAYASVFFSNILDPTEYS 93

Query: 63  WAVLIK--CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + V+I+     WN     ++  Y +M       +N  YP +  ACS+L  + +G   H  
Sbjct: 94  FNVMIRGLSTAWNKS-SLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I+ G D+D  +  S++  Y   G + DARKVFD+++ +D+VSW+S+I+ Y       E 
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M+  G +P+ ++++S+  ACGEL  L+    +   V+  K+ ++  +G++ I M
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCGDL+SA R F  ++K+   +W AMI+ Y ++G  ++A++ F  M      P+ ITL
Sbjct: 273 YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITL 332

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           I +L +CA +G L  GK V      +G   +  Y+G AL++ YA+CG +    +V + + 
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDV-YVGTALVDMYAKCGSLDNAFRVFYGMP 391

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVGSLQLG 418
            +N +SWN +IS  A  G ++EAL L   M   G  + P+  +    LSAC + G +  G
Sbjct: 392 NKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEG 451

Query: 419 LQI-------HGHVIKIDCKDEFVQSSLIDMYSKCG 447
            ++        G V KI+       S ++D++S+ G
Sbjct: 452 RRLFHMMSSSFGLVPKIEH-----YSCMVDLFSRAG 482


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 208/632 (32%), Positives = 337/632 (53%), Gaps = 9/632 (1%)

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  ++K GFD D  +  +++  Y   G    ARK+FD+M  R+ V+W+ +I+ Y  N   
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGE-LCSLRPARSIHGHVLRRKIK-IDGPLGN 235
            +   +   M+ EG  P+     S   AC E +   R  R +HG+ +R  +      +GN
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             I MY+KCGD+  A   F  +  + + SW +MI+  +++  F+ A++S+  M +    P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +   LI+ L SCA LG +  G+  H + I+ G+  +   +   L+  YAE  +++EC+KV
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVS-VSNTLLALYAETSRLAECQKV 261

Query: 356 IHAIGERNILSWNMLISEYARKGMS-KEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
              + ER+ +SWN +I   A  G S  EA+E+ ++M   G  P+  +  + L+   ++ +
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321

Query: 415 LQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMIC 472
            +L  QIH  ++K + KD+  ++++L+  Y K G       +F R+ +++  V WNSMI 
Sbjct: 322 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+  N    +A++L   M      +D  TF T + AC+ +  LE G  VH   I   +  
Sbjct: 382 GYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLES 441

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           D+ I +AL DMY+KCG +  A R F+ M  RN+ SW++MI  Y  HG  ++A  LF +M 
Sbjct: 442 DVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMK 501

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
            SG  P+ +TF+ +L ACSH G V+EG  YF +M  ++G+ P ++HY+CMVDLL R+G++
Sbjct: 502 LSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGEL 561

Query: 652 EGAFKMIHSMPFPANGSIWGALLNG-CRIHKRIDVMKTIEKELSVTGTNDNGY-YTLLSN 709
           +     I+ MP   N  IW  +L   CR + R   +     E+       N   Y LLSN
Sbjct: 562 DKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSN 621

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +YA  G W++  + R  M    +KK  G S +
Sbjct: 622 MYASGGKWEDMARTRRAMREAAVKKEAGCSWV 653



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 167/627 (26%), Positives = 309/627 (49%), Gaps = 9/627 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H ++L  G   D      LI  Y  +G   S+R +FD   + +   WA LI  Y  N  
Sbjct: 22  FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLGSGEKVHGRIIKCGFDKDDV-IQ 133
            E++  +  +MI E    + F + S +RAC  S+     G +VHG  I+ G +   V + 
Sbjct: 82  PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
             ++  Y + G +D AR VF  M  +D VSW+S+I     N    + +K ++SM + G+ 
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P    ++S   +C  L  +   +  HG  ++  + +D  + N+ + +Y++   L   ++ 
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261

Query: 254 FVKIEKRCTTSWTAMISCYNRSGW-FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           F  + +R   SW  +I     SG    +A+E F++M+     PN +T I +L + + L  
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLI 371
            +    +H  I++  +  + + +  AL+  Y + G+M  CE++   + E R+ +SWN +I
Sbjct: 322 SKLSHQIHALILKYNVKDD-NAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S Y    +  +A++L+  M   G   D F+ A+ LSAC  V +L+ G+++H   I+   +
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLE 440

Query: 432 -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            D  + S+L+DMYSKCG  + A   F  +  +++  WNSMI G+ ++G+   A+ LF +M
Sbjct: 441 SDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM 500

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
            L+    D +TF+  + ACS+IG +++G ++       YG+   +   + + D+  + G+
Sbjct: 501 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGE 560

Query: 550 LQTAQRVFDSMS-ERNVVSWSAMID-CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           L   +   + M  + N++ W  ++  C   +G+  +      +ML +    N V ++ + 
Sbjct: 561 LDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLS 620

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPD 634
              +  G  E+      AMR   V+ +
Sbjct: 621 NMYASGGKWEDMARTRRAMREAAVKKE 647



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 264/535 (49%), Gaps = 18/535 (3%)

Query: 11  RKLTRLHAHLLVTGLHYDPPA-STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           RK  ++H + + TGL+    A    LI  YA+ G +  +R VF    + DS  W  +I  
Sbjct: 119 RKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITG 178

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              N  FE+++  Y+ M +     SNF   S L +C+SLG +  G++ HG  IK G D D
Sbjct: 179 LDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMD 238

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN-ADVSEGLKMFHSMV 188
             +  ++L  Y E   L + +KVF  M  RD VSW+++I +  D+ A VSE +++F  M+
Sbjct: 239 VSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMM 298

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R G  P+ VT ++L      L + + +  IH  +L+  +K D  + N+ +  Y K G++ 
Sbjct: 299 RAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEME 358

Query: 249 SAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
           + E  F ++ E+R   SW +MIS Y  +    KA++    M++  +  +  T  TVL +C
Sbjct: 359 NCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSAC 418

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A +  L  G  VH   IR  +  +   +G AL++ Y++CG++    +  + +  RN+ SW
Sbjct: 419 ATVATLECGMEVHACAIRACLESDV-VIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSW 477

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL-------Q 420
           N +IS YAR G    AL L  +M+  G +PD  +    LSAC ++G +  G        +
Sbjct: 478 NSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTE 537

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQ-NG 478
           ++G V +++       S ++D+  + G    +   + +   + ++++W +++    + NG
Sbjct: 538 VYGLVPRVE-----HYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNG 592

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
              E      +M  N    + V ++      ++ G+ E        +    V+K+
Sbjct: 593 RKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKE 647



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 268/535 (50%), Gaps = 10/535 (1%)

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
           A   H +VL+     D  L N+ I +Y + GD +SA + F ++  R   +W  +IS Y +
Sbjct: 19  ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCA-GLGWLREGKSVHCQIIRKGMGPEYD 333
           +G  + A     +M+     PN     + + +C   + W R+G+ VH   IR G+     
Sbjct: 79  NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +G  LI  YA+CG +     V   + +++ +SWN +I+   +    ++A++    M+  
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           GLMP +F++ S+LS+C ++G + LG Q HG  IK+    D  V ++L+ +Y++       
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAEC 258

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSL-EAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             +F  + ++  V WN++I     +G S+ EAI +F +M       + VTF+  +   S+
Sbjct: 259 QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSS 318

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSA 570
           +   +    +H  ++ Y V+ D  I+ AL   Y K G+++  + +F  MSE R+ VSW++
Sbjct: 319 LSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNS 378

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIF 629
           MI  Y  +  L  A  L   M+  G + +  TF  +L AC+   ++E G + +  A+R  
Sbjct: 379 MISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRAC 438

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            +E D+   + +VD+ S+ G I+ A +  + MP   N   W ++++G   H   D    +
Sbjct: 439 -LESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARHGHGDNALRL 496

Query: 690 EKELSVTGT-NDNGYYTLLSNIYAEEGNWDE-FGKVRSIMEVTGL-KKVPGYSTI 741
              + ++G   D+  +  + +  +  G  DE F   +S+ EV GL  +V  YS +
Sbjct: 497 FTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCM 551


>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
          Length = 804

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 220/717 (30%), Positives = 380/717 (52%), Gaps = 25/717 (3%)

Query: 47  SSRLVFDTF-KEPDSFMWAVLIKCYMWNNFFEESI----LLYHKMIREQATISNFIYPSV 101
           + RL+ +   + P + +   L+  Y      EE++    LL H   R      ++ Y + 
Sbjct: 53  ARRLLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLNHAA-RPPVRSDHYTYSAA 111

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSILCTYGEF-----GCLDDARKVFD 154
           L AC+    L  G  VH  +++      D  V++ S+L  Y          +D  R++FD
Sbjct: 112 LTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFD 171

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  R+VVSW+++   Y       E L++F  M+ +G  P  V+ +++  A        P
Sbjct: 172 AMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWP 231

Query: 215 ARSIHGHVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
            + ++G +++  ++   D  + +S I M+S+ GD+ SA R F +  K+ T  W  MI+ Y
Sbjct: 232 FQ-LYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGY 290

Query: 273 NRSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            ++G F +A++ F K+L  +E P +++T ++ L + +    +  G+ +H  +I KGM   
Sbjct: 291 VQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI-KGMHRT 349

Query: 332 YDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               LG AL+  Y+ CG +     +   + E++I++WN +++ + +     E L L+ +M
Sbjct: 350 LPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEM 409

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKN 450
           Q  G   DS ++ + LSA  N G LQ+G Q HG++I+   + E ++S LIDMY+K G   
Sbjct: 410 QKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLESYLIDMYAKSGRVE 469

Query: 451 LAYLLFERIQ--QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
           +A  +F+  +  ++  V WN+MI G+ Q+G   +AI +F  M    LE   VT  + + A
Sbjct: 470 MAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPA 529

Query: 509 CSNIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           C  +G  +  GK +H   +   +  ++++ TAL DMY+KCG++ TA+ VF  M+ ++ V+
Sbjct: 530 CDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVT 589

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           ++ MI   G HG    A +LF  M + G+KP+ VTF++ + AC++SG V+EG   + +M 
Sbjct: 590 YTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMD 649

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIHKRIDVM 686
            FG+    QH+ C+ DLL+++G +E A++ I  +    N  +IWG+LL  C+   + ++ 
Sbjct: 650 SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELA 709

Query: 687 KTIEKELSVTGTN--DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K + K+L          GY  LLS + A E NW+    +R  M   GLKK  G S I
Sbjct: 710 KLVTKKLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWI 766


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 200/727 (27%), Positives = 377/727 (51%), Gaps = 9/727 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+ ++  GL +D   S  L+  YA+   +  +R +FD     D   W  L+  +  N  
Sbjct: 38  VHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKH 97

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E++ L+  M+      + F   S LR+CS+LG+   G K+H  ++K G + + V+ T+
Sbjct: 98  HFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTT 157

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +  C  +  K+   +   DVVSW+++I+S  + +  SE L+++  M+  G+ P+
Sbjct: 158 LVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPN 217

Query: 196 ---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
              FV +L +    G        + +H  ++   ++++  L  + I MY+KC  +  A +
Sbjct: 218 EFTFVKLLGMPSFLG--LGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIK 275

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
              +  K     WT++IS + ++   ++A+ + V M      PN  T  ++L + + +  
Sbjct: 276 VSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLS 335

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG-KMSECEKVIHAIGERNILSWNMLI 371
           L  G+  H ++I  G+  +  Y+G AL++ Y +C    +   K    I   N++SW  LI
Sbjct: 336 LELGEQFHSRVIMVGLEGDI-YVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLI 394

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           + +A  G  +E+++L  +MQ  G+ P+SF++++ L AC  + S+    ++HG++IK    
Sbjct: 395 AGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVD 454

Query: 432 -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            D  V ++L+D Y+  G  + A+ +   +  + ++ + ++     Q G+   A+ +   M
Sbjct: 455 IDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHM 514

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
             + ++MDE +  + I A + +G +E GK +H      G  +   +  +L   Y+KCG +
Sbjct: 515 CNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSM 574

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           + A RVF  ++E + VSW+ +I     +G ++DA S F  M  +G+KP+ VTF+++++AC
Sbjct: 575 RDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFAC 634

Query: 611 SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           S    + +G  YF +M + + + P L HY C+VDLL R G +E A  +I +MPF  +  I
Sbjct: 635 SQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVI 694

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           +  LLN C +H  + + + + +        D   Y LL+++Y   G  D   K R +M  
Sbjct: 695 YKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRE 754

Query: 730 TGLKKVP 736
            GL++ P
Sbjct: 755 RGLRRSP 761



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 173/615 (28%), Positives = 300/615 (48%), Gaps = 7/615 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           VL  C+S   L  G  VH  IIK G   D  +  ++LC Y +   +  AR +FD+M  RD
Sbjct: 23  VLSLCNS-QTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRD 81

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
           VVSW+++++++  N    E L++F  M+  G  P+  T+ S   +C  L        IH 
Sbjct: 82  VVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHA 141

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            V++  ++++  LG + + +Y+KC   +   +    ++     SWT MIS    +  + +
Sbjct: 142 SVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSE 201

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE-GKSVHCQIIRKGMGPEYDYLGPAL 339
           AL+ +VKM+E    PN  T + +LG  + LG  +  GK +H Q+I  G+      L  A+
Sbjct: 202 ALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNL-MLKTAI 260

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           I  YA+C +M +  KV     + ++  W  +IS + +    +EA+  LV M+  G++P++
Sbjct: 261 ICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNN 320

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL-AYLLFE 457
           F+ AS L+A  +V SL+LG Q H  VI +  + D +V ++L+DMY KC          F 
Sbjct: 321 FTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFR 380

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            I   +V+ W S+I GF ++G   E++ LF +M    ++ +  T  T + ACS +  + +
Sbjct: 381 GIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQ 440

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
            K +H  +I   V  D+ +  AL D YA  G    A  V   M+ R++++++ +      
Sbjct: 441 TKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQ 500

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
            G    A  +   M +  +K +E +  + + A +  G +E GK         G E     
Sbjct: 501 QGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSV 560

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
              +V   S+ G +  A+++   +  P   S W  L++G   +  I    +   ++ + G
Sbjct: 561 SNSLVHSYSKCGSMRDAYRVFKDITEPDRVS-WNGLISGLASNGLISDALSAFDDMRLAG 619

Query: 698 TNDNGYYTLLSNIYA 712
              +   T LS I+A
Sbjct: 620 VKPDS-VTFLSLIFA 633



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/598 (26%), Positives = 293/598 (48%), Gaps = 9/598 (1%)

Query: 4   FRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            RSC+ L +     ++HA ++  GL  +    T L++ Y +         +    K+ D 
Sbjct: 124 LRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDV 183

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGSGEKVHG 119
             W  +I   +  + + E++ LY KMI      + F +  +L   S LG   G G+ +H 
Sbjct: 184 VSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHS 243

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           ++I  G + + +++T+I+C Y +   ++DA KV  +    DV  W+SII+ +  N+ V E
Sbjct: 244 QLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVRE 303

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +     M   G+ P+  T  SL  A   + SL      H  V+   ++ D  +GN+ + 
Sbjct: 304 AVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVD 363

Query: 240 MYSKCGDLLS-AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
           MY KC    +   + F  I      SWT++I+ +   G+ +++++ F +M     +PN  
Sbjct: 364 MYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSF 423

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL T+LG+C+ +  + + K +H  II+  +  +   +G AL++ YA  G   E   VI  
Sbjct: 424 TLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDM-AVGNALVDAYAGGGMADEAWSVIGM 482

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R+I+++  L +   ++G  + AL ++  M    +  D FS+AS +SA   +G ++ G
Sbjct: 483 MNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETG 542

Query: 419 LQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            Q+H +  K   +    V +SL+  YSKCG    AY +F+ I +   V WN +I G   N
Sbjct: 543 KQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASN 602

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYI 536
           G   +A++ F  M L  ++ D VTFL+ I ACS    L +G  + +    +Y +   +  
Sbjct: 603 GLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDH 662

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
              L D+  + G L+ A  V ++M  + + V +  +++   +HG +     + ++ L+
Sbjct: 663 YVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLE 720


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 203/629 (32%), Positives = 332/629 (52%), Gaps = 5/629 (0%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++  ++I  G   D    T +   + + G +   R++F+K++  D+  ++ +I  + DN 
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 176 DVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
                + ++ H   +  + PD  T      A   L   R    +H H +   +  +  +G
Sbjct: 92  LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ + +Y K      A + F  + +R T  W  MIS ++R+ +F+ ++  FV ML+V   
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
            +  TL TVL + A L   R G  + C   +KG+  +  Y+   LI  Y++CGK  +   
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDV-YVLTGLISLYSKCGKSCKGRI 270

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   I + +++S+N +IS Y     ++ A+ L  ++   G   +S ++   +        
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330

Query: 415 LQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           LQL   I    +KI       V ++L  +Y +      A  LF+   +KS+  WN+MI G
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + QNG +  AI+LF +M +  L  + VT  + + AC+ +G L  GKWVH  + S  +  +
Sbjct: 391 YTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           +Y+ TAL DMYAKCG +  A+++FD M ++NVV+W+AMI  YG+HG   +A  LF +ML 
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
           SGI P  VTF++IL+ACSHSG V EG   F++M   +G +P  +HYACMVD+L R+G + 
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A + I  MP     ++WGALL  C IHK  ++     K L      + GYY LLSNIY+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + N+ +   VR +++   L K PG + I
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLI 658



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 176/659 (26%), Positives = 319/659 (48%), Gaps = 44/659 (6%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L  + T L +L ++ A L++ G+HYD  + T+L   + ++G++   R +F+   +PD 
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77

Query: 61  FMWAVLIKCYMWNNFFEESILLY-HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           F++ VLI+ +  N   + SI LY H   +      NF Y   + A S L D   G  +H 
Sbjct: 78  FLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHA 137

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             I  G   +  + ++I+  Y +F   + ARKVFD M  RD V W+++I+ +  N+   +
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +++F  M+  G+  D  T+ ++  A  EL   R    I     ++ +  D  +    I 
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +YSKCG        F +I++    S+ AMIS Y  +   + A+  F ++L   +  N  T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ ++        L+  + +    ++ G+  +   +  AL   Y    ++    ++    
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQ-PSVSTALTTVYCRLNEVQFARQLFDES 376

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+++ SWN +IS Y + G++  A+ L  +M    L P+  +V S LSAC  +G+L +G 
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGK 435

Query: 420 QIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            +HG +IK +    + +V ++L+DMY+KCG    A  LF+ +  K+VV WN+MI G+  +
Sbjct: 436 WVHG-LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLH 494

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
           G+  EA+ LF++M  + +    VTFL+ + ACS+ G + +G  + H +  +YG       
Sbjct: 495 GHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG------- 547

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
                               F  MSE     ++ M+D  G  GQL +A    ++M    +
Sbjct: 548 --------------------FQPMSEH----YACMVDILGRAGQLTNALEFIERM---PL 580

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGA 654
           +P    +  +L AC    + E       + R+F ++P+ + +Y  + ++ S   +   A
Sbjct: 581 EPGPAVWGALLGACMIHKNTEMAN--VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKA 637


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 198/580 (34%), Positives = 312/580 (53%), Gaps = 43/580 (7%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS---AERTFVK 256
           LSL + C E   L+    IH  +LR  +  D P   S ++  +      S   A++ F +
Sbjct: 39  LSLIDQCSETKQLK---QIHAQMLRTGLFFD-PFSASRLITAAALSPFPSLDYAQQVFDQ 94

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLRE 315
           I      +W  +I  Y  S    ++L  F++ML    + P+  T   ++ + + L  L  
Sbjct: 95  IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK+ H  +I+  +G +   L  +LI FYA+CG++    +V   I  R+++SWN +I+ + 
Sbjct: 155 GKAFHGMVIKVLLGSDVFILN-SLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFV 213

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
           + G  +EALEL  +M+T  + P+  ++   LSAC      + G  +H ++ +    +   
Sbjct: 214 QGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLT 273

Query: 436 QS-SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY------------------- 475
            S +++DMY+KCG    A  LF+++ +K +V W +M+ G+                    
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQD 333

Query: 476 ------------QNGNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
                       Q G   EA+ LFH++ L+   + DEVT ++ + AC+ +G ++ G W+H
Sbjct: 334 IAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIH 393

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             +   G++ + ++ T+L DMY KCGDLQ A  VF S+  ++V  WSAMI    MHG   
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGK 453

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACM 641
           DA +LF +M +  +KPN VTF NIL ACSH G VEEG+ +FN M  ++GV P ++HYACM
Sbjct: 454 DAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACM 513

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           VD+L R+G +E A ++I  MP     S+WGALL  C IH+ + + +    +L      ++
Sbjct: 514 VDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNH 573

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G Y LLSNIYA+ G WD    +R +M   GLKK PG S+I
Sbjct: 574 GAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSI 613



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 275/535 (51%), Gaps = 48/535 (8%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCG--FDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           S++  CS    L   +++H ++++ G  FD     +         F  LD A++VFD++ 
Sbjct: 40  SLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPAR 216
             ++ +W+++I +Y  +++  + L +F  M+ +  + PD  T   L +A  EL  L   +
Sbjct: 97  HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           + HG V++  +  D  + NS I  Y+KCG+L    R FV I +R   SW +MI+ + + G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             ++ALE F +M     +PN IT++ VL +CA       G+ VH  I R  +G E   L 
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIG-ESLTLS 275

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILS------------------------------ 366
            A+++ Y +CG + + +++   + E++I+S                              
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIA 335

Query: 367 -WNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
            WN LIS Y + G  KEALEL  ++Q +    PD  ++ S+LSAC  +G++ LG  IH +
Sbjct: 336 AWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVY 395

Query: 425 V----IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           +    +K++C    + +SLIDMY KCG    A ++F  +++K V +W++MI G   +G+ 
Sbjct: 396 IKKQGMKLNCH---LTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHG 452

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTA 539
            +AI LF +M  + ++ + VTF   + ACS++G +E+G+   +++ + YGV   +     
Sbjct: 453 KDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYAC 512

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLD 593
           + D+  + G L+ A  + + M      S W A++    +H  +  A     Q+++
Sbjct: 513 MVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIE 567



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 276/567 (48%), Gaps = 65/567 (11%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYA--EMGSLRSSRLVFDTFKEP 58
           + L   C+  ++L ++HA +L TGL +DP +++RLI + A     SL  ++ VFD    P
Sbjct: 39  LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKV 117
           + + W  LI+ Y  ++   +S+L++ +M+ +     + F +P +++A S L +L +G+  
Sbjct: 99  NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG +IK     D  I  S++  Y + G L    +VF  +  RDVVSW+S+I ++      
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L++F  M  + V+P+ +TM+ +  AC +       R +H ++ R +I     L N+ 
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWT------------------------------- 266
           + MY+KCG +  A+R F K+ ++   SWT                               
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWN 338

Query: 267 AMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           A+IS Y + G  ++ALE F ++ L    +P+ +TL++ L +CA LG +  G  +H  I +
Sbjct: 339 ALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK 398

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
           +GM     +L  +LI+ Y +CG + +   V H++  +++  W+ +I+  A  G  K+A+ 
Sbjct: 399 QGMKLNC-HLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIA 457

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMY 443
           L  +MQ   + P++ +  + L AC +VG ++ G      +  +      V+  + ++D+ 
Sbjct: 458 LFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL 517

Query: 444 SKCGFKNLAYLLFERIQQKSVV-MWNSMI--CGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            + G    A  L E++       +W +++  C  ++N                       
Sbjct: 518 GRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHEN----------------------- 554

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLIS 527
             + A QACS + +LE G    + L+S
Sbjct: 555 -VVLAEQACSQLIELEPGNHGAYVLLS 580


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 284/494 (57%), Gaps = 3/494 (0%)

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A + F ++ KR    W  +I  Y  +G  ++AL  +  M      P+  T   V+ SCA 
Sbjct: 81  ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L  LREGK VHC I++ G   +  ++  +L+  Y++ G+    E V   +  RNI+SW  
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDV-FVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTA 199

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I+ Y +    KE L +  +M   G  P++ ++ S L AC  +  L LG  IHG+ IK+ 
Sbjct: 200 VIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLG 259

Query: 430 C-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              D  + ++LI +Y KCG    A  LF+ +  +++V WN+MI  + QN     A+ LF 
Sbjct: 260 VDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFR 319

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M    ++ D +T ++ I AC+++G L  G+W+H  +   G+  ++ I  AL DMYAKCG
Sbjct: 320 RMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCG 379

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           ++  A+ VF+ +  R+VVSW++MI     HG   DA  LF +M D G+KPN  TF  +  
Sbjct: 380 NIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFT 439

Query: 609 ACSHSGSVEEGKFYFNA-MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           AC HSG VEEG+ +F + MR + + P ++H ACMVDLL R+G +  A++ I  MP   + 
Sbjct: 440 ACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDV 499

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           S+WGALL  CRIH  +++ + + ++L +       +Y L+SNIYAE G W++  ++R +M
Sbjct: 500 SVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559

Query: 728 EVTGLKKVPGYSTI 741
           E   LKK+PG+S +
Sbjct: 560 EERELKKIPGHSLV 573



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 277/524 (52%), Gaps = 15/524 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMG-SLRSSRLVFDTFKEPDSF 61
           L   C++L  L+R+HA ++  G   +   ST+LI +   +  ++  +R +FD   + D F
Sbjct: 35  LLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVF 94

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           +W  LI+ Y      EE++ LY  M        N+ +P V+R+C+ L  L  G++VH  I
Sbjct: 95  LWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNI 154

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K GFD D  +Q+S++  Y + G       VF +M  R++VSW+++IA Y  N    EGL
Sbjct: 155 VKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGL 214

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +F  MV  G +P+ VT++S+  AC  L  L   + IHG+ ++  +  D  L N+ I +Y
Sbjct: 215 GVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALY 274

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KCG++ +A   F  +  +   SW AMI+ Y ++     A++ F +M   K + + IT++
Sbjct: 275 GKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMV 334

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +V+ +CA LG L  G+ +H  + RKG+      +  ALI+ YA+CG +    +V   +  
Sbjct: 335 SVISACASLGALNTGRWMHELVKRKGLEINVS-ITNALIDMYAKCGNIDLAREVFERLPC 393

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+++SW  +I   A  G  ++AL+L  +M+  G+ P+SF+ A+  +AC + G ++ G + 
Sbjct: 394 RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKH 453

Query: 422 HGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQ 476
              +++       V+  + ++D+  + G    AY   +++  +  V +W +++  C  + 
Sbjct: 454 FESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHS 513

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           N   LE   L  +  L  L+   VTF   +   SNI   E G+W
Sbjct: 514 N---LELAELVAEK-LFLLDPQTVTFYVLM---SNI-YAEAGRW 549


>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
 gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
          Length = 806

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 212/736 (28%), Positives = 372/736 (50%), Gaps = 21/736 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L R C N R L    R+HAH++   L  +      + + YA      ++  +FD   +  
Sbjct: 56  LLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRR 115

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W VL+K ++  +   +++ LY +M  E    S   +   + AC  + DL  G  +H 
Sbjct: 116 PFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIHY 175

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R+   G   +  IQ++++  Y + G +D A   FD         W++I+++         
Sbjct: 176 RV-ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRR 234

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNS 236
            +++F  M  E  +    +      AC     LR    IH  +   + +I G    + N+
Sbjct: 235 AIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKI---QSEIHGTRVLVLNA 289

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY +CG L  A R F  +  R   SWT+MI+   ++G +  +++ F  M+     PN
Sbjct: 290 LISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPN 349

Query: 297 LITLITVLGSCAGLGW---LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             T  +V+ + A LG    L  G+ +H QI   G+  +   +  +LI  YA  G ++E  
Sbjct: 350 EKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDAD-PIVQNSLINMYARSGLLAEAR 408

Query: 354 KVIHAIGE--RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
           +V  +I E  + ++S+  +IS YA  G  ++ALE+  +M   G+ P+  + A+ L+AC  
Sbjct: 409 EVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVA 468

Query: 412 VGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           +G L  G  IH  +I+  +D  D F  +SL+DMY+KCG    A  +FE ++ K +V W +
Sbjct: 469 IGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTT 528

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I    Q+GN+  A++L+ +M  + +  D  T  T + AC+N+G L  G+ +H + +   
Sbjct: 529 IIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSK 588

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           + +D +   AL  MYAKCG L+ A R++      +V +W++M+  +   G  + A  L+ 
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYA 648

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRS 648
           +M   G++PNEVTF+ +L +CS +G V EG+ +F+++   +G +P  +H+ CMVD+L R+
Sbjct: 649 EMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRA 708

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G +  A +++ SMPF  +   W +LL+ C++H   ++     + L          +  LS
Sbjct: 709 GKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALS 768

Query: 709 NIYAEEGNWDEFGKVR 724
            IYA  G   +  +++
Sbjct: 769 QIYAAAGRNSDIDEIK 784



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 172/589 (29%), Positives = 293/589 (49%), Gaps = 15/589 (2%)

Query: 78  ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
           +  LL    +R ++T    +Y ++LR C +   L  G +VH  I+     ++ ++   + 
Sbjct: 33  DDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVF 92

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
             Y    C D A  +FD M  R    W+ ++  +       + L+++  M  E  +P   
Sbjct: 93  QMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSAC 152

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
             +    ACG +  L   RSIH  V   +  I+  + ++ + MY++CG +  A   F   
Sbjct: 153 GFMWAIVACGRIKDLAQGRSIHYRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDN 211

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +  T  W A++S    +G  ++A+E F +M   + + +  +    LG+CA  G LR G 
Sbjct: 212 RELGTAPWNAIMSALAGAGHHRRAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGI 269

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H +I  +  G     L  ALI  Y  CGK+ E  +V   +  RN++SW  +I+  A+ 
Sbjct: 270 QIHDKIQSEIHGTRVLVLN-ALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQT 328

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS---LQLGLQIHGHVIK--IDCKD 432
           G    +++L   M   G+ P+  + AS +SA  ++G    L  G +IH  +    ID  D
Sbjct: 329 GHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDA-D 387

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
             VQ+SLI+MY++ G    A  +F+ I    K+VV + +MI  +  NG+  +A+ +F +M
Sbjct: 388 PIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREM 447

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV-RKDIYIDTALTDMYAKCGD 549
               +  +E+TF T + AC  IG L  G W+H ++I  G+   D +   +L DMYAKCGD
Sbjct: 448 TARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGD 507

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A RVF++M  +++V+W+ +I      G    A  L+ +ML SGI P+  T   +L A
Sbjct: 508 LGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVA 567

Query: 610 CSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           C++ G +  G K +  A+R   +E D      +  + ++ G +E A ++
Sbjct: 568 CANLGDLAMGEKIHRQALR-SKLEQDAHFQNALAAMYAKCGSLEKATRL 615


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 191/589 (32%), Positives = 318/589 (53%), Gaps = 6/589 (1%)

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           R + +W+ +I    +N   ++ L ++ SM   GV  + +T   L +AC  L S++    +
Sbjct: 9   RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HGHVL+   + D  +  + + MYSKC  + SA + F ++ +R   SW AM+S Y+R    
Sbjct: 69  HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR---EGKSVHCQIIRKGMGPEYDYL 335
            +AL    +M  +  EP   T +++L   + L        GKS+HC +I+ G+      L
Sbjct: 129 DQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSL 188

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             +L+  Y +   M E  KV   + E++I+SW  +I  Y + G + EA  L  QMQ   +
Sbjct: 189 ANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSV 248

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYL 454
             D     + +S C  V  L L   +H  V+K  C + + V++ LI MY+KCG    A  
Sbjct: 249 GIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARR 308

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+ I +KS++ W SMI G+   G+  EA++LF +M    +  +  T  T + AC+++G 
Sbjct: 309 IFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGS 368

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L  G+ +   +   G+  D  + T+L  MY+KCG +  A+ VF+ ++++++  W++MI+ 
Sbjct: 369 LSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINS 428

Query: 575 YGMHGQLNDAASLFKQMLDS-GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
           Y +HG  N+A SLF +M  + GI P+ + + ++  ACSHSG VEEG  YF +M + FG+ 
Sbjct: 429 YAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGIT 488

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P ++H  C++DLL R G ++ A   I  MP      +WG LL+ CRIH  +++ +     
Sbjct: 489 PTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVR 548

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L  +    +G Y L++N+Y   G W E   +R+ M+  GL K  G+S +
Sbjct: 549 LLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQV 597



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 273/542 (50%), Gaps = 9/542 (1%)

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + W ++I+    N FF +++ +Y  M       +N  YP +L+AC++L  +  G  +HG 
Sbjct: 12  YTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGH 71

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K GF  D  +QT+++  Y +   +  AR+VFD+M  R VVSW++++++Y   + + + 
Sbjct: 72  VLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQA 131

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLR---PARSIHGHVLRRKI-KIDGPLGNS 236
           L +   M   G EP   T +S+      L S       +SIH  +++  I  ++  L NS
Sbjct: 132 LSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANS 191

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY +   +  A + F  ++++   SWT MI  Y + G   +A   F +M       +
Sbjct: 192 LMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGID 251

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +  + ++  C  +  L    SVH  +++ G   E D +   LI  YA+CG ++   ++ 
Sbjct: 252 FVVFLNLISGCIQVRDLLLASSVHSLVLKCGCN-EKDPVENLLITMYAKCGNLTSARRIF 310

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             I E+++LSW  +I+ Y   G   EAL+L  +M    + P+  ++A+ +SAC ++GSL 
Sbjct: 311 DLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLS 370

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           +G +I  ++     + D+ VQ+SLI MYSKCG    A  +FER+  K + +W SMI  + 
Sbjct: 371 IGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYA 430

Query: 476 QNGNSLEAINLFHQMYL-NCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKD 533
            +G   EAI+LFH+M     +  D + + +   ACS+ G +E+G K+       +G+   
Sbjct: 431 IHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPT 490

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +   T L D+  + G L  A      M  +     W  ++    +HG +        ++L
Sbjct: 491 VEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLL 550

Query: 593 DS 594
           DS
Sbjct: 551 DS 552



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 234/462 (50%), Gaps = 15/462 (3%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C NL  +   T LH H+L  G   D    T L++ Y++   + S+R VFD   +  
Sbjct: 52  LLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRS 111

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKM--IREQATISNFIYPSVLRACSSLGDLG---SG 114
              W  ++  Y   +  ++++ L  +M  +  + T S F+  S+L   S+L        G
Sbjct: 112 VVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFV--SILSGYSNLDSFEFHLLG 169

Query: 115 EKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           + +H  +IK G    +V +  S++  Y +F  +D+ARKVFD M  + ++SW+++I  Y  
Sbjct: 170 KSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVK 229

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                E   +F+ M  + V  DFV  L+L   C ++  L  A S+H  VL+       P+
Sbjct: 230 IGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPV 289

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N  I MY+KCG+L SA R F  I ++   SWT+MI+ Y   G   +AL+ F +M+    
Sbjct: 290 ENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDI 349

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            PN  TL TV+ +CA LG L  G+ +   I   G+  +   +  +LI  Y++CG + +  
Sbjct: 350 RPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESD-QQVQTSLIHMYSKCGSIVKAR 408

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNV 412
           +V   + ++++  W  +I+ YA  GM  EA+ L  +M T  G+MPD+    S   AC + 
Sbjct: 409 EVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHS 468

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLA 452
           G ++ GL+    + K       V+  + LID+  + G  +LA
Sbjct: 469 GLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLA 510



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 227/427 (53%), Gaps = 7/427 (1%)

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
           +R   +W  MI     +G+F + L  +  M       N +T   +L +CA L  ++ G  
Sbjct: 8   RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +H  +++ G   +  ++  AL++ Y++C  ++   +V   + +R+++SWN ++S Y+R+ 
Sbjct: 68  LHGHVLKLGFQAD-TFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRS 126

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ---LGLQIHGHVIKIDCK--DE 433
              +AL LL +M   G  P + +  S LS   N+ S +   LG  IH  +IK+     + 
Sbjct: 127 SMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEV 186

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            + +SL+ MY +    + A  +F+ + +KS++ W +MI G+ + G+++EA  LF+QM   
Sbjct: 187 SLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQ 246

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            + +D V FL  I  C  +  L     VH  ++  G  +   ++  L  MYAKCG+L +A
Sbjct: 247 SVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSA 306

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           +R+FD + E++++SW++MI  Y   G   +A  LF++M+ + I+PN  T   ++ AC+  
Sbjct: 307 RRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADL 366

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
           GS+  G+     + + G+E D Q    ++ + S+ G I  A ++   +    + ++W ++
Sbjct: 367 GSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVT-DKDLTVWTSM 425

Query: 674 LNGCRIH 680
           +N   IH
Sbjct: 426 INSYAIH 432



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 38/406 (9%)

Query: 16  LHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +H  L+  G+ Y +   +  L+  Y +   +  +R VFD   E     W  +I  Y+   
Sbjct: 172 IHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIG 231

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E+  L+++M  +   I   ++ +++  C  + DL     VH  ++KCG ++ D ++ 
Sbjct: 232 HAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVEN 291

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++  Y + G L  AR++FD +  + ++SW+S+IA Y       E L +F  M+R  + P
Sbjct: 292 LLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRP 351

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T+ ++  AC +L SL   + I  ++    ++ D  +  S I MYSKCG ++ A   F
Sbjct: 352 NGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVF 411

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWL 313
            ++  +  T WT+MI+ Y   G   +A+  F KM   +   P+ I   +V  +C+  G +
Sbjct: 412 ERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLV 471

Query: 314 REGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
            EG      + +  G+ P  ++    LI+     G++               L+ N    
Sbjct: 472 EEGLKYFKSMQKDFGITPTVEHC-TCLIDLLGRVGQLD--------------LALN---- 512

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             A +GM  +     VQ Q WG +         LSAC   G+++LG
Sbjct: 513 --AIQGMPPD-----VQAQVWGPL---------LSACRIHGNVELG 542


>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
          Length = 788

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 219/746 (29%), Positives = 377/746 (50%), Gaps = 38/746 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L    ++HA +L  G  Y  +    T+L+  YA+  ++  ++ +F   + 
Sbjct: 36  ILQGCVYERDLCTGQQIHARILKNGDFYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRV 95

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA +I         E ++  + +MI       N++ P+V +AC +L     G  V
Sbjct: 96  RNVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRGV 155

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K G      + +S+   YG+ G L+DARKVFDK+  R+VV+W++++  Y  N   
Sbjct: 156 HGYLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPERNVVAWNALMVGYVQNGMN 215

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++   M +EG+EP  VT+ +   A   +  +   +  H   +   +++D  LG S 
Sbjct: 216 EEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSI 275

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           +  Y K G +  AE  F ++ ++   +W  +IS Y + G    A+     M       + 
Sbjct: 276 LNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDS 335

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL T++ + A    L+ GK V C  IR     E   L    ++ YA+CG + + +KV  
Sbjct: 336 VTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEI-VLASTAVDMYAKCGSIVDAKKVFD 394

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  E++++ WN L++ YA  G+S EAL L   MQ   + P+  +            S+ L
Sbjct: 395 STVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMIT----------WNSIIL 444

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            L  +G V   + K+ F+Q     M S   F NL             + W +M+ G  QN
Sbjct: 445 SLLRNGQV--DEAKEMFLQ-----MQSSGIFPNL-------------ISWTTMMNGLVQN 484

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
           G S EAIN   +M  + L  +  +   A+ AC+++  L  G+ +H  +I +      +  
Sbjct: 485 GCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSF 544

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            T+L DMYAKCGD+  A++ F S     +  ++AMI  Y ++G + +A +L++++ D  I
Sbjct: 545 VTSLVDMYAKCGDINQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIALYRRLEDMAI 604

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           KP+ +TF ++L ACSH+G + +    F  M    G++P L+HY  MVDLL+ SG+   A 
Sbjct: 605 KPDSITFTSLLSACSHAGDIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLASSGETNKAL 664

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           ++I  MP+  +  +  +L+       + +++  + K+L  +   ++G Y  +SN +A EG
Sbjct: 665 ELIKEMPYKPDARMIQSLVASNNKQHKTELVDYLSKQLLESEPENSGNYVTISNAFAIEG 724

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +WDE  K+R +M+  GLKK PG S I
Sbjct: 725 SWDEVVKMREMMKAKGLKKKPGCSWI 750



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 283/568 (49%), Gaps = 19/568 (3%)

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR--- 224
           ++S   + ++ E L++   M    V         + + C     L   + IH  +L+   
Sbjct: 2   VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61

Query: 225 ---RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
              R   I+  L    ++ Y+KC  +  A+  F ++  R   SW A+I    R G  + A
Sbjct: 62  FYARNQYIETKL----LIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGA 117

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
           L  FV+M+E    P+   +  V  +C  L W   G+ VH  +++ G+  +  ++  +L +
Sbjct: 118 LTGFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGL-HDCVFVASSLAD 176

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            Y +CG +++  KV   I ERN+++WN L+  Y + GM++EA+ LL  M+  G+ P   +
Sbjct: 177 MYGKCGVLNDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVT 236

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           V++ LSA  N+  ++ G Q H   I    + D  + +S+++ Y K G    A ++F+R+ 
Sbjct: 237 VSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMI 296

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           +K VV WN +I G+ Q G   +AI++   M L  L  D VT  T + A +    L+ GK 
Sbjct: 297 EKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKE 356

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           V    I +    +I + +   DMYAKCG +  A++VFDS  E++++ W+ ++  Y   G 
Sbjct: 357 VQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGL 416

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
             +A  LF  M    + PN +T+ +I+ +   +G V+E K  F  M+  G+ P+L  +  
Sbjct: 417 SGEALRLFYDMQLESVPPNMITWNSIILSLLRNGQVDEAKEMFLQMQSSGIFPNLISWTT 476

Query: 641 MVDLLSRSGDIEGAFKMIHSMP----FPANGSIWGALLNGCRIHKRIDVMKTIEKEL--S 694
           M++ L ++G  E A   +  M      P + SI  A L+ C     ++  ++I   +  +
Sbjct: 477 MMNGLVQNGCSEEAINFLRKMQESGLRPNSFSITVA-LSACAHLASLNFGRSIHGYIIRN 535

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
           +  ++   + T L ++YA+ G+ ++  K
Sbjct: 536 LQHSSSVSFVTSLVDMYAKCGDINQAEK 563


>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
 gi|223945665|gb|ACN26916.1| unknown [Zea mays]
 gi|224028321|gb|ACN33236.1| unknown [Zea mays]
          Length = 780

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 220/720 (30%), Positives = 369/720 (51%), Gaps = 12/720 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM-WAVLIKCYMWNNFFEESILL 82
           GL  D    + +++  A+ G L  +   F+  +   S + W   I   + N      + +
Sbjct: 65  GLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEM 124

Query: 83  YHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG 141
           +  M+R      N F Y  VL AC++  +LG G  VHG +++   + D  + TSI+  Y 
Sbjct: 125 FLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYV 184

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           + G +  A   F +M  R+VVSW++ IA +    D    + +   M+R GV  +  T  S
Sbjct: 185 KCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATS 244

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           +  AC +   +R A  +HG +++ ++ +D  +  + I  Y+  G +   E+ F +++   
Sbjct: 245 ILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVS 304

Query: 262 TTS-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
             S W+A IS  +R    Q++++   +ML     PN     +V  S   +     G+ +H
Sbjct: 305 NRSIWSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVFSS---VDSSELGRQLH 360

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
             +I+ G       +  AL   Y+ C  + +  KV   + E++ +SW  +I+ +A  G S
Sbjct: 361 PLVIKDGF-IHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHS 419

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLI 440
            EA ++L  M   G  P+  S+++ LSAC     L  G ++HGHV++   +   +   L+
Sbjct: 420 VEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGRTTSINHCLV 479

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MYSKC     A  LF+    K  +M +SMI G+  NG S EA++LF  M      +D  
Sbjct: 480 SMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRF 539

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              + I  C+N+ +   GK +H      G+  D+ + ++L  +Y+K G+L  +++VFD +
Sbjct: 540 LCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDEL 599

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              ++V+W+A+ID Y  HG   DA +LF  M+  G+KP+ V  +++L AC  +G VEEG 
Sbjct: 600 DVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGF 659

Query: 621 FYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            +FN+MR ++GVEP L HY CMVDLL RSG +  A   I SMP   N  +W  LL  CR+
Sbjct: 660 KHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAACRV 719

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           H  + + + +E ++      D+G +  +SNI A  G+W+   ++R    V  ++K PG+S
Sbjct: 720 HDDVVLGRFVENKIHEENC-DSGCFATMSNIRANSGDWEGVMEIRK--SVKDVEKEPGWS 776



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 161/655 (24%), Positives = 293/655 (44%), Gaps = 57/655 (8%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L     YD    T ++  Y + G + ++   F      +   W   I  ++    
Sbjct: 160 VHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQED 219

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++LL  +M+R    I+ +   S+L ACS    +    +VHG IIK     D V++ +
Sbjct: 220 PVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEA 279

Query: 136 ILCTYGEFGCLDDARKVF---DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           ++ TY   G +    KVF   D +++R +  WS+ I S      V   +++   M+ + +
Sbjct: 280 LISTYANAGAVQLCEKVFQEVDTVSNRSI--WSAFI-SGVSRHSVQRSIQLLRRMLFQCL 336

Query: 193 EPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            P+   + ++ S  ++  EL      R +H  V++        + ++   MYS+C DL  
Sbjct: 337 RPNDKCYASVFSSVDS-SEL-----GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKD 390

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           + + F +++++   SWT+MI+ +   G   +A +    M+     PN ++L  +L +C  
Sbjct: 391 SYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNI 450

Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
              L +GK VH  ++R  G     ++    L+  Y++C  +    K+  A   ++ +  +
Sbjct: 451 PECLLKGKEVHGHVLRAYGRTTSINH---CLVSMYSKCKDLQTARKLFDATPCKDQIMLS 507

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +IS YA  G S+EAL L   M   G   D F  +S +S C N+     G  +HG+  K+
Sbjct: 508 SMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKV 567

Query: 429 DC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               D  V SSL+ +YSK G  + +  +F+ +    +V W ++I G+ Q+G+S +A+ LF
Sbjct: 568 GILSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALF 627

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAK 546
             M    ++ D V  ++ + AC   G +E+G K  +     YGV   ++    + D+  +
Sbjct: 628 DLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGR 687

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            G L  A+   +SM                                   +KPN + +  +
Sbjct: 688 SGRLVEAKSFIESMP----------------------------------VKPNSMVWSTL 713

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           L AC     V  G+F  N  +I     D   +A M ++ + SGD EG  ++  S+
Sbjct: 714 LAACRVHDDVVLGRFVEN--KIHEENCDSGCFATMSNIRANSGDWEGVMEIRKSV 766



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 8/362 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH  ++  G  +    ++ L   Y+    L+ S  VF+  +E D   W  +I  +  + 
Sbjct: 358 QLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHG 417

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E+  +   MI E  T ++    ++L AC+    L  G++VHG +++  + +   I  
Sbjct: 418 HSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSINH 476

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++  Y +   L  ARK+FD    +D +  SS+I+ Y  N    E L +F  M+  G   
Sbjct: 477 CLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHI 536

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D     S+   C  +      + +HG+  +  I  D  + +S + +YSK G+L  + + F
Sbjct: 537 DRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVF 596

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +++     +WTA+I  Y + G  Q AL  F  M+    +P+ + L++VL +C   G + 
Sbjct: 597 DELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVE 656

Query: 315 EGKSVHCQIIRKGMGPE---YDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNML 370
           EG   H   +R   G E   + Y    +++     G++ E +  I ++  + N + W+ L
Sbjct: 657 EGFK-HFNSMRTVYGVEPVLHHYC--CMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTL 713

Query: 371 IS 372
           ++
Sbjct: 714 LA 715


>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
          Length = 817

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 220/720 (30%), Positives = 369/720 (51%), Gaps = 12/720 (1%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM-WAVLIKCYMWNNFFEESILL 82
           GL  D    + +++  A+ G L  +   F+  +   S + W   I   + N      + +
Sbjct: 102 GLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEM 161

Query: 83  YHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG 141
           +  M+R      N F Y  VL AC++  +LG G  VHG +++   + D  + TSI+  Y 
Sbjct: 162 FLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYV 221

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           + G +  A   F +M  R+VVSW++ IA +    D    + +   M+R GV  +  T  S
Sbjct: 222 KCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATS 281

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           +  AC +   +R A  +HG +++ ++ +D  +  + I  Y+  G +   E+ F +++   
Sbjct: 282 ILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVS 341

Query: 262 TTS-WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
             S W+A IS  +R    Q++++   +ML     PN     +V  S   +     G+ +H
Sbjct: 342 NRSIWSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVFSS---VDSSELGRQLH 397

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
             +I+ G       +  AL   Y+ C  + +  KV   + E++ +SW  +I+ +A  G S
Sbjct: 398 PLVIKDGF-IHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHS 456

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLI 440
            EA ++L  M   G  P+  S+++ LSAC     L  G ++HGHV++   +   +   L+
Sbjct: 457 VEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGRTTSINHCLV 516

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MYSKC     A  LF+    K  +M +SMI G+  NG S EA++LF  M      +D  
Sbjct: 517 SMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRF 576

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              + I  C+N+ +   GK +H      G+  D+ + ++L  +Y+K G+L  +++VFD +
Sbjct: 577 LCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDEL 636

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              ++V+W+A+ID Y  HG   DA +LF  M+  G+KP+ V  +++L AC  +G VEEG 
Sbjct: 637 DVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGF 696

Query: 621 FYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            +FN+MR ++GVEP L HY CMVDLL RSG +  A   I SMP   N  +W  LL  CR+
Sbjct: 697 KHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAACRV 756

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           H  + + + +E ++      D+G +  +SNI A  G+W+   ++R    V  ++K PG+S
Sbjct: 757 HDDVVLGRFVENKIHEENC-DSGCFATMSNIRANSGDWEGVMEIRK--SVKDVEKEPGWS 813



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 161/655 (24%), Positives = 293/655 (44%), Gaps = 57/655 (8%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L     YD    T ++  Y + G + ++   F      +   W   I  ++    
Sbjct: 197 VHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQED 256

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++LL  +M+R    I+ +   S+L ACS    +    +VHG IIK     D V++ +
Sbjct: 257 PVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEA 316

Query: 136 ILCTYGEFGCLDDARKVF---DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           ++ TY   G +    KVF   D +++R +  WS+ I S      V   +++   M+ + +
Sbjct: 317 LISTYANAGAVQLCEKVFQEVDTVSNRSI--WSAFI-SGVSRHSVQRSIQLLRRMLFQCL 373

Query: 193 EPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            P+   + ++ S  ++  EL      R +H  V++        + ++   MYS+C DL  
Sbjct: 374 RPNDKCYASVFSSVDS-SEL-----GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKD 427

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           + + F +++++   SWT+MI+ +   G   +A +    M+     PN ++L  +L +C  
Sbjct: 428 SYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNI 487

Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
              L +GK VH  ++R  G     ++    L+  Y++C  +    K+  A   ++ +  +
Sbjct: 488 PECLLKGKEVHGHVLRAYGRTTSINH---CLVSMYSKCKDLQTARKLFDATPCKDQIMLS 544

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +IS YA  G S+EAL L   M   G   D F  +S +S C N+     G  +HG+  K+
Sbjct: 545 SMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKV 604

Query: 429 DC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               D  V SSL+ +YSK G  + +  +F+ +    +V W ++I G+ Q+G+S +A+ LF
Sbjct: 605 GILSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALF 664

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAK 546
             M    ++ D V  ++ + AC   G +E+G K  +     YGV   ++    + D+  +
Sbjct: 665 DLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGR 724

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            G L  A+   +SM                                   +KPN + +  +
Sbjct: 725 SGRLVEAKSFIESMP----------------------------------VKPNSMVWSTL 750

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           L AC     V  G+F  N  +I     D   +A M ++ + SGD EG  ++  S+
Sbjct: 751 LAACRVHDDVVLGRFVEN--KIHEENCDSGCFATMSNIRANSGDWEGVMEIRKSV 803



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 8/362 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH  ++  G  +    ++ L   Y+    L+ S  VF+  +E D   W  +I  +  + 
Sbjct: 395 QLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHG 454

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E+  +   MI E  T ++    ++L AC+    L  G++VHG +++  + +   I  
Sbjct: 455 HSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSINH 513

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++  Y +   L  ARK+FD    +D +  SS+I+ Y  N    E L +F  M+  G   
Sbjct: 514 CLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHI 573

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D     S+   C  +      + +HG+  +  I  D  + +S + +YSK G+L  + + F
Sbjct: 574 DRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVF 633

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +++     +WTA+I  Y + G  Q AL  F  M+    +P+ + L++VL +C   G + 
Sbjct: 634 DELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVE 693

Query: 315 EGKSVHCQIIRKGMGPE---YDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNML 370
           EG   H   +R   G E   + Y    +++     G++ E +  I ++  + N + W+ L
Sbjct: 694 EGFK-HFNSMRTVYGVEPVLHHYC--CMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTL 750

Query: 371 IS 372
           ++
Sbjct: 751 LA 752


>gi|15234184|ref|NP_193657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|2828297|emb|CAA16711.1| putative protein [Arabidopsis thaliana]
 gi|7268717|emb|CAB78924.1| putative protein [Arabidopsis thaliana]
 gi|332658761|gb|AEE84161.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 932

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 226/741 (30%), Positives = 371/741 (50%), Gaps = 32/741 (4%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           RK + LH   + TGL  D      L+  YA+  +L S+  VF   +  D   W  ++   
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
           + N    +S+  +  M           +  V+ ACSS+ +L  GE +HG +IK G+  + 
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324

Query: 131 VIQ--TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
            +    SI+  Y + G  + A  VF+++  RDV+S ++I+  +  N    E   + + M 
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384

Query: 189 R-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVMYSKCGD 246
             + ++PD  T++S+   CG+L   R  R++HG+ +R +++     + NS I MY KCG 
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVL 304
              AE  F     R   SW +MIS ++++G+  KA   F +++      + +L T++ +L
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            SC     L  GKSVHC + + G           L   +     MSE          R++
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLG----------DLTSAFLRLETMSE---------TRDL 545

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            SWN +IS  A  G   E+L     M   G +  D  ++  ++SA GN+G +  G   HG
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHG 605

Query: 424 HVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
             IK +   D  +Q++LI MY +C     A  +F  I   ++  WN +I    QN    E
Sbjct: 606 LAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGRE 665

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
              LF  + L   E +E+TF+  + A + +G    G   H  LI  G + + ++  AL D
Sbjct: 666 VFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVD 722

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEV 601
           MY+ CG L+T  +VF +    ++ +W+++I  +G HG    A  LFK++  +S ++PN+ 
Sbjct: 723 MYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS 782

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           +F+++L ACSHSG ++EG  Y+  M   FGV+P  +H   +VD+L R+G +  A++ I  
Sbjct: 783 SFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITG 842

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           +  P    +WGALL+ C  H    + K + + L     ++  YY  L+N Y   G W+E 
Sbjct: 843 IGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEA 902

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
            ++R ++E   LKK+PGYS I
Sbjct: 903 VRLRKMVEDNALKKLPGYSVI 923



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 188/703 (26%), Positives = 328/703 (46%), Gaps = 32/703 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   L  GL  D   S++L+  Y   G L SS  +FD  KE D  +W  +I     N  
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           +  ++ L+ +MI +     +        A SSL        +H   I+ G   D  +  +
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +   L  A  VF  M  RD+VSW++I+     N    + L+ F SM   G E D
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG--PLGNSFIVMYSKCGDLLSAERT 253
            VT   +  AC  +  L    S+HG V++     +    +GNS I MYSKCGD  +AE  
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEPNLITLITVLGSCAGLGW 312
           F ++  R   S  A+++ +  +G F++A     +M  V K +P++ T++++   C  L +
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
            REG++VH   +R  M      +  ++I+ Y +CG  ++ E +      R+++SWN +IS
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468

Query: 373 EYARKGMSKEALELLVQMQT-WGLMPDSFS-VASSLSACGNVGSLQLGLQIHGHVIKIDC 430
            +++ G + +A  L  ++ + +     S S V + L++C +  SL  G  +H  + K+  
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG- 527

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQ 489
                     D+ S       A+L  E + + + +  WNS+I G   +G+ LE++  F  
Sbjct: 528 ----------DLTS-------AFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 570

Query: 490 MYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           M     +  D +T L  I A  N+G + +G+  H   I      D  +   L  MY +C 
Sbjct: 571 MSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK 630

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           D+++A +VF  +S+ N+ SW+ +I     +    +   LF+ +    ++PNE+TF+ +L 
Sbjct: 631 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLS 687

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           A +  GS   G      +   G + +    A +VD+ S  G +E   K+  +    +  S
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSI-S 746

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTG---TNDNGYYTLLS 708
            W ++++    H   +    + KELS       N + + +LLS
Sbjct: 747 AWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 169/588 (28%), Positives = 293/588 (49%), Gaps = 31/588 (5%)

Query: 88  REQATI-SNFIY-PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           RE  T+ S+F++   VLR+     +  +   VH   +KCG  +D    + +L  YG  G 
Sbjct: 78  RENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGE 137

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L  +  +FD++  +DV+ W+S+I +   N      + +F  M+ +G E D  T+L  A A
Sbjct: 138 LVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASA 197

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
              L   R    +H   +   +  D  L N+ + +Y+K  +L SAE  F  +E R   SW
Sbjct: 198 LSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
             +++    +G  +K+L+ F  M    +E + +T   V+ +C+ +  L  G+S+H  +I+
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317

Query: 326 KGMGPE-YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
            G  PE +  +G ++I  Y++CG     E V   +  R+++S N +++ +A  GM +EA 
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377

Query: 385 ELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLID 441
            +L QMQ+   + PD  +V S  S CG++   + G  +HG+ ++++ +   ++  +S+ID
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVID 437

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMDE 499
           MY KCG    A LLF+    + +V WNSMI  F QNG + +A NLF ++    +C +   
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSL 497

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            T L  + +C +   L  GK VH  L                    K GDL +A    ++
Sbjct: 498 STVLAILTSCDSSDSLIFGKSVHCWL-------------------QKLGDLTSAFLRLET 538

Query: 560 MSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVE 617
           MSE R++ SW+++I      G   ++   F+ M   G I+ + +T +  + A  + G V 
Sbjct: 539 MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 598

Query: 618 EGKFYFNAMRIFGV-EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +G+  F+ + I  + E D Q    ++ +  R  DIE A K+   +  P
Sbjct: 599 QGR-CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 220/746 (29%), Positives = 375/746 (50%), Gaps = 38/746 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           L + C   R L    +LHA ++  G  +  +    ++L+  YA+ G+   +  +F     
Sbjct: 57  LLQGCVYERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPS 116

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           P+ F WA +I  +    F EE++  Y KM ++     NF+ P+VL+AC  L  +  G+ V
Sbjct: 117 PNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGV 176

Query: 118 HGRIIKC-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           H  ++K  G  +   + TS++  YG+ G ++DA KVFD+M+ R+ V+W+S++ +Y  N  
Sbjct: 177 HAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGM 236

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E +++F  M  +GVE   V +     AC    ++   R  HG  +   +++D  LG+S
Sbjct: 237 NQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSS 296

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            +  Y K G +  AE  F  +  +   +W  +++ Y + G  +KALE    M E     +
Sbjct: 297 IMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFD 356

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +TL  +L   A    L  G   H   ++     +   +   +I+ YA+CG+M    +V 
Sbjct: 357 CVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDV-VVSSGIIDMYAKCGRMDCARRVF 415

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             + +++I+ WN +++  A +G+S EAL+L  QMQ   + P+  S            SL 
Sbjct: 416 SCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVS----------WNSLI 465

Query: 417 LGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G   +G V +        ++   +M S     NL             + W +M+ G  Q
Sbjct: 466 FGFFKNGQVAE-------ARNMFAEMCSSGVMPNL-------------ITWTTMMSGLVQ 505

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG    A+ +F +M    +  + ++  +A+  C+++  L+ G+ +H  ++   + + I+I
Sbjct: 506 NGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHI 565

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            T++ DMYAKCG L  A+ VF   S + +  ++AMI  Y  HGQ  +A  LFKQM   GI
Sbjct: 566 ITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGI 625

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            P+ +T  ++L ACSH G ++EG   F  M     ++P  +HY C+V LL+  G ++ A 
Sbjct: 626 VPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEAL 685

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           + I +MP   +  I G+LL  C  +  I++   I K L     +++G Y  LSN+YA  G
Sbjct: 686 RTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVG 745

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
            WD+   +R +M+  GL+K+PG S I
Sbjct: 746 KWDKVSNLRGLMKEKGLRKIPGCSWI 771



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 240/484 (49%), Gaps = 8/484 (1%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRR--KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           +L + C    +L  A  +H  V++R     ++  + +  +++Y+KCG    A R F    
Sbjct: 56  TLLQGCVYERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSP 115

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
                SW A+I  + R+G+ ++AL  ++KM +    P+   L  VL +C  L W+R GK 
Sbjct: 116 SPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKG 175

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           VH  +++     E  Y+  +L++ Y +CG + +  KV   + ERN ++WN ++  YA+ G
Sbjct: 176 VHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNG 235

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQS 437
           M++EA+ +  +M+  G+     +++   +AC N  ++  G Q HG  +    + D  + S
Sbjct: 236 MNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGS 295

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           S+++ Y K G    A ++F  +  K VV WN ++ G+ Q G   +A+ +   M    L  
Sbjct: 296 SIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRF 355

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D VT    +   ++   L  G   H   +      D+ + + + DMYAKCG +  A+RVF
Sbjct: 356 DCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVF 415

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             + ++++V W+ M+      G   +A  LF QM    + PN V++ ++++    +G V 
Sbjct: 416 SCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVA 475

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP----FPANGSIWGAL 673
           E +  F  M   GV P+L  +  M+  L ++G   GA  +   M      P + SI  A 
Sbjct: 476 EARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSA- 534

Query: 674 LNGC 677
           L+GC
Sbjct: 535 LSGC 538



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 147/294 (50%), Gaps = 4/294 (1%)

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-- 429
           S   + G  +EA+  L QM +  L        + L  C    +L L LQ+H  VIK    
Sbjct: 24  SSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPT 83

Query: 430 -CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              ++FV S L+ +Y+KCG    A  LF      +V  W ++I    + G   EA+  + 
Sbjct: 84  FALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYI 143

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKC 547
           +M  + L  D       ++AC  +  +  GK VH  ++ + G+++ +Y+ T+L DMY KC
Sbjct: 144 KMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKC 203

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G ++ A +VFD MSERN V+W++M+  Y  +G   +A  +F++M   G++   V      
Sbjct: 204 GAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFF 263

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            AC++S +V EG+       + G+E D    + +++   + G IE A  +  +M
Sbjct: 264 TACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNM 317


>gi|297738048|emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 207/649 (31%), Positives = 342/649 (52%), Gaps = 62/649 (9%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L  C ++  L    K+H  ++  G  +D + +T ++  YG FG ++ AR +FD++ + 
Sbjct: 91  SLLGICKTVSSL---RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNP 147

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSI 218
           D+ SW  +I  YF N   SE ++ +++ +R+ + E D V    + +AC EL      R +
Sbjct: 148 DLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKL 207

Query: 219 HGHVLRRKIKIDGPLGNSFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           H  +    +K+  P  +SF++     MY+KC ++  + R F +I  R    WT+MI  Y 
Sbjct: 208 HCQI----VKVGSP--DSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYV 261

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++   ++ L  F +M E   E N  TL +++ +C  LG L +GK VH  +I+ G      
Sbjct: 262 QNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLN-S 320

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +L   L++ Y +CG + +   V   +   +++SW  +I  YA++G  +EAL+L    +  
Sbjct: 321 FLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWK 380

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
            L+P++ + +S LSAC   GSL +G  +H   IK+  +D   +++L+DMY+KC     A 
Sbjct: 381 DLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENALVDMYAKCHMIGDAR 440

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +FE +  K V+ WNS+I G+ QNG + EA+ LF QM  + +  D +T ++ + AC+++G
Sbjct: 441 YVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG 500

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
               G  +H   I  G+                             +S R         D
Sbjct: 501 AYRVGSSLHGYAIKAGL-----------------------------LSGR---------D 522

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
           C       + +  LF  ML   ++PNEV F  IL ACSHSG + EG  YFN M +++   
Sbjct: 523 C-------SRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFV 575

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P ++HYACMVDLL+R+G +E A   I  +P   + S+ GA L+GCR+H R D+ +   + 
Sbjct: 576 PSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRR 635

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +     +   YY L+SN+YA EG W +  +V  +M+  GL K+PG+S +
Sbjct: 636 MLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLV 684



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 173/601 (28%), Positives = 299/601 (49%), Gaps = 54/601 (8%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           C  +  L ++HA L+V GL  D    T+L+  Y   G +  +RL+FD  + PD + W V+
Sbjct: 96  CKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVM 155

Query: 67  IKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           I+ Y  N+ + E +  Y+  +R+      N ++  VL+ACS L +   G K+H +I+K G
Sbjct: 156 IRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG 215

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
              D  + T ++  Y +   ++D+R+VFD++  R+VV W+S+I  Y  N  + EGL +F+
Sbjct: 216 -SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFN 274

Query: 186 SMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
            M REG VE +  T+ SL  AC +L +L   + +HG+V++    ++  L    + +Y KC
Sbjct: 275 RM-REGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKC 333

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           GD+  A   F ++      SWTAMI  Y + G+ ++AL+ F         PN +T  +VL
Sbjct: 334 GDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVL 393

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +CA  G L  G+SVHC  I+  +G E      AL++ YA+C  + +   V   + ++++
Sbjct: 394 SACAQTGSLNMGRSVHCLGIK--LGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDV 451

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           ++WN +IS Y + G + EALEL  QM++  + PD+ ++ S LSAC +VG+ ++G  +HG+
Sbjct: 452 IAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGY 511

Query: 425 VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
            IK                                             G     +   ++
Sbjct: 512 AIK--------------------------------------------AGLLSGRDCSRSL 527

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDM 543
            LF  M    LE +EV F T + ACS+ G L +G ++ +     Y     +     + D+
Sbjct: 528 ELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDL 587

Query: 544 YAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
            A+ G L+ A    + +  + +V    A +    +H + +      ++ML+  + P++  
Sbjct: 588 LARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLE--LHPDKAC 645

Query: 603 F 603
           +
Sbjct: 646 Y 646



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 176/329 (53%), Gaps = 5/329 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+ LR+     +LH  ++  G   D    T L++ YA+   +  SR VFD   + +
Sbjct: 191 VLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRN 249

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ N+  +E ++L+++M       + +   S++ AC+ LG L  G+ VHG
Sbjct: 250 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 309

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +IK GFD +  + T +L  Y + G + DA  VFD++++ D+VSW+++I  Y       E
Sbjct: 310 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPRE 369

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F     + + P+ VT  S+  AC +  SL   RS+H   ++   + D    N+ + 
Sbjct: 370 ALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVD 428

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KC  +  A   F  +  +   +W ++IS Y ++G+  +ALE F +M      P+ IT
Sbjct: 429 MYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAIT 488

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           L++VL +CA +G  R G S+H   I+ G+
Sbjct: 489 LVSVLSACASVGAYRVGSSLHGYAIKAGL 517


>gi|147773389|emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
          Length = 672

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 207/685 (30%), Positives = 366/685 (53%), Gaps = 54/685 (7%)

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +F+W  LI+ Y         + +Y++M+R      +  +P VL+AC+   ++  G +VHG
Sbjct: 7   AFLWNTLIRGYSIAGV-GGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHG 65

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K GF+ D  +  ++L  YG  G L DA +VFD+M  +D+VSW+++I  +  N    E
Sbjct: 66  XVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGCWXE 125

Query: 180 GLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L +F  M +R G+ P+ V+++S+   C  +     A  IHG+V++  ++    +GN+ +
Sbjct: 126 VLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEIHGYVVKVGLEFQVIVGNALL 185

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y KCG++ + ++ F ++ ++   SW A+I+ +   G ++ AL+ F  M++   +PN I
Sbjct: 186 DVYGKCGNVAALKQVFGEMVEKNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSI 245

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           T+ + L     L + + G+ VH   IR  MG E D ++  +LI+ YA+ G  +E   V +
Sbjct: 246 TISSFLPVLVELEFFKAGREVHGSSIR--MGLESDIFIANSLIDMYAKSGHSTEASNVFY 303

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  +N++SWN +I+ +A+      A+ L+ QMQ +G +P+S +  + L AC  +G ++ 
Sbjct: 304 KLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRP 363

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IH   I + C  D FV ++L DMY+K G   LA  +F+    +  V +N +I G  Q
Sbjct: 364 GKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGXSQ 422

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
             +  E+++LF +M L  L+ D V+F+ A+ AC+N+  +++GK +H  L+       +++
Sbjct: 423 TSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFV 482

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML--DS 594
             +L D Y KCG +  A+ +FD M+ ++V SW+ MI  YGM G+L+ A  L  + +  D 
Sbjct: 483 ANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLLTENMRKDD 542

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
               + V+F+ +L ACSH                                  R+G +E A
Sbjct: 543 VESDDSVSFIAVLSACSH---------------------------------GRAGLMEEA 569

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
            ++I  +P   + +IWGALL  CRI+  +++     + L          + L      + 
Sbjct: 570 AELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHL----------FELKPE--HKT 617

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYS 739
           G WDE  ++R +M+  G+KK PG S
Sbjct: 618 GRWDEANRIRELMKSRGVKKSPGCS 642



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 270/517 (52%), Gaps = 11/517 (2%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C +   +RK   +H  ++  G   D      L+  Y   G LR +  VFD   E D
Sbjct: 47  VLKACADAFEVRKGREVHGXVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKD 106

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
              W  +I  +  N  + E + L+ +M +R     +     SVL  C+ + D  +  ++H
Sbjct: 107 LVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEIH 166

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++K G +   ++  ++L  YG+ G +   ++VF +M  +++VSW++II S+       
Sbjct: 167 GYVVKVGLEFQVIVGNALLDVYGKCGNVAALKQVFGEMVEKNLVSWNAIITSFGYKGHYR 226

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L MF  M+ EG++P+ +T+ S      EL   +  R +HG  +R  ++ D  + NS I
Sbjct: 227 DALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLI 286

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G    A   F K++ +   SW AMI+ + ++ +   A+    +M +  E PN +
Sbjct: 287 DMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSV 346

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           T   VL +CA +G +R GK +H + I   MG  +D ++  AL + YA+ G +     V  
Sbjct: 347 TFTNVLPACARMGLVRPGKEIHARSIH--MGCAFDLFVSNALTDMYAKSGHLKLARNVFD 404

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
               R+ +S+N+LI   ++     E+L L  +MQ  GL  D+ S   +LSAC N+ +++ 
Sbjct: 405 T-SLRDEVSYNILIVGXSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQ 463

Query: 418 GLQIHGHVI-KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G +IHG ++ K+     FV +SL+D Y+KCG   LA  +F+R+  K V  WN+MI G+  
Sbjct: 464 GKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGM 523

Query: 477 NGNSLEAINLFHQ-MYLNCLEMDE-VTFLTAIQACSN 511
            G    AI+L  + M  + +E D+ V+F+  + ACS+
Sbjct: 524 LGELDTAIDLLTENMRKDDVESDDSVSFIAVLSACSH 560


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 208/645 (32%), Positives = 348/645 (53%), Gaps = 24/645 (3%)

Query: 110 DLGSGEKVHGRIIKCG--FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVVSWS 165
           D+  G  + G +++ G   + D V+  S+L  Y +   +  AR VFD M    RD+VSW+
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 166 SIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC--GELCSLRPARSIHGHVL 223
           ++ +    N   +E L++F   + EG+ P+  T+ +  +AC   EL  L    ++ G V 
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHL-AGGAVLGLVF 180

Query: 224 RRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
           +      D  +G + I M++K GDL++  R F  + +R    WT +I+ Y +SG+  +A+
Sbjct: 181 KLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAV 240

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
           E F+ MLE   +P+  TL ++L +C  LG  R G+ +H   +R G+  +   +   L++ 
Sbjct: 241 ELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESD-SCVSCGLVDM 299

Query: 343 YAECGK---MSECEKVIHAIGERNILSWNMLISEYARKG-MSKEALELLVQMQTWGLMPD 398
           YA+      +    +V + + + N+++W  L+S Y ++G    + + L  +M   G+ P+
Sbjct: 300 YAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPN 359

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFE 457
             + +S L AC N+G    G QIH H +K +  D   V ++L+ MY++ G    A   F+
Sbjct: 360 HITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFD 419

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM--DEVTFLTAIQACSNIGQL 515
           ++ +K++V ++  + G   +G S    N +    +  +E+     TF + I A +++G L
Sbjct: 420 QLYEKNMVSFSGNLDG---DGRS----NTYQDYQIERMELGISTFTFGSLISAAASVGML 472

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
            KG+ +H   +  G   D  I  +L  MY++CG L  A +VFD M++ NV+SW++MI   
Sbjct: 473 TKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGL 532

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             HG    A  LF  M+ +G+KPN+VT++ +L ACSH+G V+EGK +F  M +  G+ P 
Sbjct: 533 AKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPR 592

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           ++HYACMVDLL RSG +E A   I+ MP   +  +W  LL  C+ H  +D+ +     + 
Sbjct: 593 MEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVI 652

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
                D   Y LLSN+YAE G WD+  ++RS+M    L K  G S
Sbjct: 653 QLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLS 697



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 202/395 (51%), Gaps = 10/395 (2%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D      LI+ +A+ G L + R VFD   E    +W +LI  Y  + + +E++ L+  M+
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDML 247

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF---G 144
                   +   S+L AC+ LG    G+++H   ++ G + D  +   ++  Y +     
Sbjct: 248 ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQ 307

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDN-ADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
            L +AR+VF++M   +V++W+++++ Y    +  ++ + +F  M+ EG+ P+ +T  S+ 
Sbjct: 308 SLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSML 367

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +AC  L      R IH H ++  +     +GN+ + MY++ G +  A   F ++ ++   
Sbjct: 368 KACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMV 427

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           S++  +    RS  +Q   +  ++ +E+    +  T  +++ + A +G L +G+ +H   
Sbjct: 428 SFSGNLDGDGRSNTYQ---DYQIERMELG--ISTFTFGSLISAAASVGMLTKGQRLHALS 482

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           ++ G G +   +G +L+  Y+ CG + +  +V   + + N++SW  +IS  A+ G +  A
Sbjct: 483 LKAGFGSDR-AIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARA 541

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           LEL   M   G+ P+  +  + LSAC + G ++ G
Sbjct: 542 LELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEG 576



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 213/453 (47%), Gaps = 46/453 (10%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEM---GSLRSSRLVFDTFK 56
           +  +CT L   R   +LH+  L  GL  D   S  L++ YA+     SL ++R VF+   
Sbjct: 261 MLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP 320

Query: 57  EPDSFMWAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           + +   W  L+  Y+     +  ++ L+ KM+ E    ++  Y S+L+AC++LGD  SG 
Sbjct: 321 KHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGR 380

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H   +K      +V+  +++  Y E G +++AR  FD++  +++VS+S  +     + 
Sbjct: 381 QIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNL-----DG 435

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D        + + R  +     T  SL  A   +  L   + +H   L+     D  +GN
Sbjct: 436 DGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGN 495

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S + MYS+CG L+ A + F ++      SWT+MIS   + G+  +ALE F  M+    +P
Sbjct: 496 SLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKP 555

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N +T I VL +C+  G ++EGK  H ++++K  G     L P + E YA           
Sbjct: 556 NDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHG-----LIPRM-EHYA----------- 597

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
                         ++    R G+ ++AL+ + +M       D+    + L AC    ++
Sbjct: 598 -------------CMVDLLGRSGLVEDALDFINEMPC---QVDALVWKTLLGACKTHNNM 641

Query: 416 QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
            +G     HVI+++ +D      L ++Y++ G 
Sbjct: 642 DIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGL 674


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 202/652 (30%), Positives = 353/652 (54%), Gaps = 49/652 (7%)

Query: 129 DDVIQTS-ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY------------FDNA 175
           + + QT+ +L    + G ++DARK+FDKM  +D  SW+++I+SY            FD  
Sbjct: 63  ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122

Query: 176 DVS-------------------EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
                                 E   +F SM  EG +    T+ S+   C  L  ++   
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182

Query: 217 SIHGHVLRRKIKIDGPLGNSFIV-----MYSKCGDLLSAERTF--VKIEKRCTTSWTAMI 269
            IHG V++     +G  GN F+V     MY+KC  +  AE  F  ++ +++    WTAM+
Sbjct: 183 MIHGFVVK-----NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMV 237

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y ++G   KA+E F  M     E N  T  T+L +C+ +     G+ VH  I++ G G
Sbjct: 238 TGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFG 297

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
               Y+  AL++ YA+CG +   + ++  + + +++SWN L+  + R G+ +EAL L   
Sbjct: 298 SNV-YVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKN 356

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGF 448
           M    +  D ++  S L+ C  VGS+     +HG +IK   ++ + V ++L+DMY+K G 
Sbjct: 357 MHGRNMKIDDYTFPSVLNCC-VVGSINPK-SVHGLIIKTGFENYKLVSNALVDMYAKTGD 414

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + AY +FE++ +K V+ W S++ G+ QN +  E++ +F  M +  +  D+    + + A
Sbjct: 415 MDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSA 474

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+ +  LE GK VH   I  G+R    +  +L  MYAKCG L  A  +F SM  ++V++W
Sbjct: 475 CAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITW 534

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-R 627
           +A+I  Y  +G+  ++   +  M+ SG +P+ +TF+ +L+ACSH+G V+EG+ YF  M +
Sbjct: 535 TAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNK 594

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
           ++G++P  +HYACM+DL  RSG ++ A +++  M    + ++W +LL+ CR+H+ +++ +
Sbjct: 595 VYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAE 654

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
                L      +   Y +LSN+Y+    W++  K+R +M+  G+ K PG S
Sbjct: 655 RAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCS 706



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 286/589 (48%), Gaps = 39/589 (6%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM-------WNNFFE------- 77
           + +L+   ++ G +  +R +FD   + D + W  +I  Y+           F+       
Sbjct: 68  TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127

Query: 78  -----------------ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
                            E+  L+  M  E    S F   SVLR CSSLG + +GE +HG 
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVS 178
           ++K GF+ +  + T ++  Y +  C+ +A  +F   +   ++ V W++++  Y  N D  
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + ++ F  M  +GVE +  T  ++  AC  + +      +HG +++     +  + ++ +
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALV 307

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCGDL +A+     +E     SW +++  + R G  ++AL  F  M     + +  
Sbjct: 308 DMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDY 367

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  +VL  C  +G +   KSVH  II+ G    Y  +  AL++ YA+ G M     V   
Sbjct: 368 TFPSVLNCCV-VGSINP-KSVHGLIIKTGF-ENYKLVSNALVDMYAKTGDMDCAYTVFEK 424

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E++++SW  L++ YA+    +E+L++   M+  G+ PD F VAS LSAC  +  L+ G
Sbjct: 425 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFG 484

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            Q+H   IK   +  + V +SL+ MY+KCG  + A  +F  +Q K V+ W ++I G+ QN
Sbjct: 485 KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQN 544

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYI 536
           G    ++  +  M  +    D +TF+  + ACS+ G +++G K+       YG++     
Sbjct: 545 GKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEH 604

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDA 584
              + D++ + G L  A+++ D M  + +   W +++    +H  L  A
Sbjct: 605 YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELA 653



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 248/506 (49%), Gaps = 17/506 (3%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD--TFKE 57
           + R C++L  +     +H  ++  G   +    T L++ YA+   +  +  +F    F  
Sbjct: 168 VLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR 227

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +  +W  ++  Y  N    +++  +  M  +    + + +P++L ACSS+     GE+V
Sbjct: 228 KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQV 287

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG I+K GF  +  +Q++++  Y + G L +A+ + + M   DVVSW+S++  +  +   
Sbjct: 288 HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLE 347

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L++F +M    ++ D  T  S+   C  + S+ P +S+HG +++   +    + N+ 
Sbjct: 348 EEALRLFKNMHGRNMKIDDYTFPSVLNCC-VVGSINP-KSVHGLIIKTGFENYKLVSNAL 405

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY+K GD+  A   F K+ ++   SWT++++ Y ++   +++L+ F  M      P+ 
Sbjct: 406 VDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ 465

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
             + ++L +CA L  L  GK VH   I+ G+         +L+  YA+CG + + + +  
Sbjct: 466 FIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYN-SLVAMYAKCGCLDDADAIFV 524

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           ++  +++++W  +I  YA+ G  + +L+    M + G  PD  +    L AC + G +  
Sbjct: 525 SMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDE 584

Query: 418 G---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI-- 471
           G    Q    V  I    E   + +ID++ + G  + A  L +++  K    +W S++  
Sbjct: 585 GRKYFQQMNKVYGIKPGPEHY-ACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643

Query: 472 CGFYQNGNSLE--AINLFHQMYLNCL 495
           C  ++N    E  A NLF    +N +
Sbjct: 644 CRVHENLELAERAATNLFELEPMNAM 669


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 213/716 (29%), Positives = 370/716 (51%), Gaps = 34/716 (4%)

Query: 48  SRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA---------TISNFIY 98
           ++ VFDT    D   W  L+  Y        +  L+  M  + +         T  + I 
Sbjct: 226 AQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLIT 285

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
            + L +CS    LG  +++  R++K G   D  + ++++  +   G LD+A+ ++  +  
Sbjct: 286 ATYLSSCS----LGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKE 341

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS----LRP 214
           R+ V+ + +IA            ++F    R+    +  T + L  A  E  +    LR 
Sbjct: 342 RNAVTLNGLIAGLVKQQHGEAAAEIFMG-ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRK 400

Query: 215 ARSIHGHVLR-----RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
            R +H HVLR     RKI +     N  + MY+KCG +  A R F  +E R   SW  +I
Sbjct: 401 GREVHAHVLRAGHIYRKIAVS----NGLVNMYAKCGAIDKACRVFQLMEARDRISWNTII 456

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           +  +++G+ + A+ ++  M +    P+    I+ L SCAGLG L  G+ +HC  ++ G+ 
Sbjct: 457 TALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLY 516

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR-KGMSKEALELLV 388
            +   +  AL++ Y ECG+MSEC ++ +++   +++SWN ++   A  +    E++++  
Sbjct: 517 LDTS-VSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFS 575

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCG 447
            M   GL+P+  +  + L+A   +  L+LG QIH  ++K    +D  V ++L+  Y+K G
Sbjct: 576 NMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSG 635

Query: 448 FKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
             +    LF R+  ++  + WNSMI G+  NG+  EA++    M  +   MD  TF   +
Sbjct: 636 DVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVL 695

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            AC+++  LE+G  +H   +   +  D+ +++AL DMY+KCG +  A +VF SMS++N  
Sbjct: 696 NACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEF 755

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW++MI  Y  HG    A  +F++M +SG  P+ VTF+++L ACSH+G VE G  YF  M
Sbjct: 756 SWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM 815

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK---RI 683
             +G+ P ++HY+C++DLL R+G+++   + +  MP   N  IW  +L  C+  K   +I
Sbjct: 816 EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKI 875

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           D+     + L      +   Y L S  +A  G W++  K R+ M+   +KK  G S
Sbjct: 876 DLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRS 931



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 190/688 (27%), Positives = 337/688 (48%), Gaps = 30/688 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH  ++  GL +D   +  L+ SYA+   L ++R VFD     ++  W  LI  ++ +  
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 76  FEESILLYHKMIREQA--TISNFIYPSVLRACSSLGD--LGSGEKVHGRIIKCGFDKDDV 131
            E++  L+  M+RE      ++F + SVLRAC   G   LG   +VHG + K  F  +  
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 132 IQTSILCTYG--EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
           +  +++  YG    G    A++VFD    RD+++W+++++ Y    D      +F +M  
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 190 E--GVE--PDFVTMLSLAEACG-ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           +  G+E  P   T  SL  A     CSL     +   VL+     D  +G++ +  +++ 
Sbjct: 267 DDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARH 326

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G L  A+  ++ +++R   +   +I+   +    + A E F+   +     N+ T + +L
Sbjct: 327 GMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARD-SAAVNVDTYVVLL 385

Query: 305 GSCAGLGW----LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            + A        LR+G+ VH  ++R G       +   L+  YA+CG + +  +V   + 
Sbjct: 386 SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R+ +SWN +I+   + G  + A+     M+   + P +F+  S LS+C  +G L  G Q
Sbjct: 446 ARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQ 505

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H   +K     D  V ++L+ MY +CG  +  + +F  +    VV WNS I G   +  
Sbjct: 506 LHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQ 564

Query: 480 S--LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           +   E++ +F  M  + L  ++VTF+  + A + +  LE GK +H  ++ +GV +D  +D
Sbjct: 565 APITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVD 624

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            AL   YAK GD+ + +R+F  MS  R+ +SW++MI  Y  +G L +A      M+ S  
Sbjct: 625 NALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQ 684

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG----VEPDLQHYACMVDLLSRSGDIE 652
             +  TF  +L AC+   ++E G      M  FG    +E D+   + +VD+ S+ G I+
Sbjct: 685 MMDHCTFSIVLNACASVAALERGM----EMHAFGLRSHLESDVVVESALVDMYSKCGRID 740

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIH 680
            A K+ HSM    N   W ++++G   H
Sbjct: 741 YASKVFHSMS-QKNEFSWNSMISGYARH 767



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 276/537 (51%), Gaps = 20/537 (3%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPA-STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           LRK   +HAH+L  G  Y   A S  L+  YA+ G++  +  VF   +  D   W  +I 
Sbjct: 398 LRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIIT 457

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
               N + E +++ Y  M +     SNF   S L +C+ LG L +G+++H   +K G   
Sbjct: 458 ALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYL 517

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN-ADVSEGLKMFHSM 187
           D  +  +++  YGE G + +  ++F+ M++ DVVSW+SI+     + A ++E +++F +M
Sbjct: 518 DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNM 577

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           ++ G+ P+ VT ++   A   L  L   + IH  +L+  +  D  + N+ +  Y+K GD+
Sbjct: 578 MKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDV 637

Query: 248 LSAERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
            S ER F ++  +R   SW +MIS Y  +G  Q+A++    M+  ++  +  T   VL +
Sbjct: 638 DSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNA 697

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA +  L  G  +H   +R  +  +   +  AL++ Y++CG++    KV H++ ++N  S
Sbjct: 698 CASVAALERGMEMHAFGLRSHLESDV-VVESALVDMYSKCGRIDYASKVFHSMSQKNEFS 756

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL------Q 420
           WN +IS YAR G+ ++ALE+  +MQ  G  PD  +  S LSAC + G ++ GL      +
Sbjct: 757 WNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME 816

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGN 479
            +G + +I+       S +ID+  + G  +      +R+  K + ++W +++    Q+ +
Sbjct: 817 DYGILPRIE-----HYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKH 871

Query: 480 SLEAINL---FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             + I+L     +M L     + V ++ + +  + IG+ E        +    V+K+
Sbjct: 872 RAK-IDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKE 927



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 288/588 (48%), Gaps = 30/588 (5%)

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
            S E +H  ++K G   D  +   ++ +Y +   LD AR+VFD M  R+ VSW+ +I+ +
Sbjct: 82  ASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGH 141

Query: 172 FDNADVSEGLKMFHSMVRE--GVEPDFVTMLSLAEACGELCSLRP--ARSIHGHVLRRKI 227
             +    +   +F +M+RE  G  P   T  S+  AC +    R   A  +HG V + + 
Sbjct: 142 VLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEF 201

Query: 228 KIDGPLGNSFIVMYSKC--GDLLSAERTFVKIEKRCTTSWTAMISCYNRSG------WFQ 279
             +  + N+ I MY  C  G  + A+R F     R   +W A++S Y + G         
Sbjct: 202 TSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLF 261

Query: 280 KALESFVKMLEVKE-EPNLITLITV--LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           +A++     +E++  E    +LIT   L SC+ LG L +   +  ++++ G   +  Y+G
Sbjct: 262 RAMQYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQ---LFVRVLKSGCSSDL-YVG 316

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGL 395
            AL+  +A  G + E + +   + ERN ++ N LI+   ++   + A E+ +  + +  +
Sbjct: 317 SALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV 376

Query: 396 MPDSFSVASSLSACGNVGSLQLGL----QIHGHVIKID--CKDEFVQSSLIDMYSKCGFK 449
             D++ V   LSA     + + GL    ++H HV++     +   V + L++MY+KCG  
Sbjct: 377 NVDTYVVL--LSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAI 434

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A  +F+ ++ +  + WN++I    QNG    A+  +  M  N +       ++ + +C
Sbjct: 435 DKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSC 494

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           + +G L  G+ +H   + +G+  D  +  AL  MY +CG +     +F+SMS  +VVSW+
Sbjct: 495 AGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWN 554

Query: 570 AMIDCYG-MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +++         + ++  +F  M+ SG+ PN+VTF+N L A +    +E GK   + M  
Sbjct: 555 SIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK 614

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            GV  D      ++   ++SGD++   ++   M    +   W ++++G
Sbjct: 615 HGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISG 662



 Score = 42.4 bits (98), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 3/110 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C ++  L R   +HA  L + L  D    + L++ Y++ G +  +  VF +  + +
Sbjct: 694 VLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKN 753

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
            F W  +I  Y  +    +++ ++ +M     +  +  + SVL ACS  G
Sbjct: 754 EFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAG 803


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/629 (32%), Positives = 331/629 (52%), Gaps = 5/629 (0%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++  ++I  G   D    T +   + + G +   R++F+K++  D+  ++ +I  + DN 
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 176 DVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
                + ++ H      + PD  T      A   L   R    +H H +   +  +  +G
Sbjct: 92  LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ + +Y K      A + F  + +R T  W  MIS ++R+ +F+ ++  FV ML+V   
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
            +  TL TVL + A L   R G  + C   +KG+  +  Y+   LI  Y++CGK  +   
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDV-YVLTGLISLYSKCGKSCKGRI 270

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   I + +++S+N +IS Y     ++ A+ L  ++   G   +S ++   +        
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330

Query: 415 LQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           LQL   I    +KI       V ++L  +Y +      A  LF+   +KS+  WN+MI G
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + QNG +  AI+LF +M +  L  + VT  + + AC+ +G L  GKWVH  + S  +  +
Sbjct: 391 YTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           +Y+ TAL DMYAKCG +  A+++FD M ++NVV+W+AMI  YG+HG   +A  LF +ML 
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
           SGI P  VTF++IL+ACSHSG V EG   F++M   +G +P  +HYACMVD+L R+G + 
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A + I  MP     ++WGALL  C IHK  ++     K L      + GYY LLSNIY+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + N+ +   VR +++   L K PG + I
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLI 658



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 176/660 (26%), Positives = 321/660 (48%), Gaps = 46/660 (6%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L  + T L +L ++ A L++ G+HYD  + T+L   + ++G++   R +F+   +PD 
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATI--SNFIYPSVLRACSSLGDLGSGEKVH 118
           F++ VLI+ +  N   + SI LY  + R+   +   NF Y   + A S L D   G  +H
Sbjct: 78  FLFNVLIRGFSDNGLPKSSIFLYTHL-RKXTNLRPDNFTYAFAISAASRLEDERVGVLLH 136

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              I  G   +  + ++I+  Y +F   + ARKVFD M  RD V W+++I+ +  N+   
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + +++F  M+  G+  D  T+ ++  A  EL   R    I     ++ +  D  +    I
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +YSKCG        F +I++    S+ AMIS Y  +   + A+  F ++L   +  N  
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL+ ++        L+  + +    ++ G+  +   +  AL   Y    ++    ++   
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQ-PSVSTALTTVYCRLNEVQFARQLFDE 375

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             E+++ SWN +IS Y + G++  A+ L  +M    L P+  +V S LSAC  +G+L +G
Sbjct: 376 SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIG 434

Query: 419 LQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
             +HG +IK +    + +V ++L+DMY+KCG    A  LF+ +  K+VV WN+MI G+  
Sbjct: 435 KWVHG-LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGL 493

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIY 535
           +G+  EA+ LF++M  + +    VTFL+ + ACS+ G + +G  + H +  +YG      
Sbjct: 494 HGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG------ 547

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
                                F  MSE     ++ M+D  G  GQL +A    ++M    
Sbjct: 548 ---------------------FQPMSEH----YACMVDILGRAGQLTNALEFIERM---P 579

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGA 654
           ++P    +  +L AC    + E       + R+F ++P+ + +Y  + ++ S   +   A
Sbjct: 580 LEPGPAVWGALLGACMIHKNTEMAN--VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKA 637


>gi|302766669|ref|XP_002966755.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
 gi|300166175|gb|EFJ32782.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
          Length = 811

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 196/645 (30%), Positives = 342/645 (53%), Gaps = 31/645 (4%)

Query: 92  TISNFIYPSVLRACSSLGD--LGSGEKVHGR-------------IIKCGFDKDDVIQTSI 136
           + SN +  S + AC+ LG   L  G ++H R              +    ++DD++ T++
Sbjct: 9   SASNLV--SSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVATAL 66

Query: 137 LCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +  Y + G LDDAR+VFD   + S+ +  W+++++ Y  +    + L+++   +    EP
Sbjct: 67  VDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVSSEP 126

Query: 195 -DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D V +LS   AC     L   R+IH  +  R++     LGN  + MY +C +L  A + 
Sbjct: 127 PDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRARKA 186

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F KI  +   SW  +I  Y + G    A+E F +M       + +T + VL +C G+   
Sbjct: 187 FEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVEAA 246

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
            + + +H ++   G+  E+D ++  +L+  Y +CG ++E ++V   +  +N ++   +++
Sbjct: 247 GDVRRIHKKLELSGL--EWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLA 304

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---ID 429
            YA+ G+ +EALE+  +M++ G   D  +  S+L AC ++G+L  G  IH  ++    I 
Sbjct: 305 AYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQ 364

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D  + ++L++MY +CG  + A  LF+ +  K+ + WN+++  + Q G   EA+NL+H 
Sbjct: 365 QPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLYHS 424

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M     + + +TFL  + ACS +G L +G+  H +L   G  K++ +  AL +MY KCG 
Sbjct: 425 MDA---QPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGS 481

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L+ A   F  +  + VV+W+  +     HG+  +   LF +M   G+ P+ V  +  L+A
Sbjct: 482 LEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVALLAALFA 541

Query: 610 CSHSGSVEEGKFYF-NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSHSG ++EG+ YF N ++ +GV P L HY C+VDLL R+G +  A ++I SMPF  +  
Sbjct: 542 CSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAV 601

Query: 669 IWGALLNGCRIHKRI-DVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            W  LL  CR H  + D  K    +   T  ++ G Y  LS +Y+
Sbjct: 602 TWTTLLAACRTHSTLYDKAKVAADKALETEPHNAGIYFALSYMYS 646



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/567 (28%), Positives = 287/567 (50%), Gaps = 10/567 (1%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM--WAVLIKCYMWNNFFEESILLYHK 85
           D   +T L++ Y++ GSL  +R VFD +      M  W  ++  Y  +    +++ LY +
Sbjct: 59  DDLVATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQR 118

Query: 86  MIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG 144
            +   +   + +   S + ACSS   L  G  +H +I     D    +   ++  YG   
Sbjct: 119 FLSVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCK 178

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
            L  ARK F+K+T++++VSW+ II +Y         +++F  M  EGV  D VT L + +
Sbjct: 179 ELHRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLD 238

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
           ACG + +    R IH  +    ++ D  + +S +  Y KCG L  A+R F  +  + T +
Sbjct: 239 ACGGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVT 298

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
            T+M++ Y + G  ++ALE + +M     + + +T I+ L +C+ +G L +G+++H +++
Sbjct: 299 MTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLL 358

Query: 325 RKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
             G+  + D  LG AL+  Y  CG +   + +   + ++N ++WN L+  YA+ G  KEA
Sbjct: 359 VSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEA 418

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDM 442
           L L   M      P+S +  + L+AC  VG+L  G   H  +     + E  V  +L++M
Sbjct: 419 LNLYHSMDA---QPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNM 475

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y KCG    A   F ++++K+VV W   +     +G   E + LF +M L+ +  D V  
Sbjct: 476 YGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVAL 535

Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           L A+ ACS+ G+L++G+     +I  YGV   +     + D+  + G L  A+ + DSM 
Sbjct: 536 LAALFACSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMP 595

Query: 562 -ERNVVSWSAMIDCYGMHGQLNDAASL 587
            E + V+W+ ++     H  L D A +
Sbjct: 596 FEPSAVTWTTLLAACRTHSTLYDKAKV 622



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 227/465 (48%), Gaps = 17/465 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA +    L +       L+  Y     L  +R  F+     +   W V+I  Y     
Sbjct: 151 IHAQISSRELDHHTHLGNGLVNMYGRCKELHRARKAFEKITAKNLVSWNVIIGAYAQEGH 210

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
              ++ L+ +M  E        +  VL AC  +   G   ++H ++   G + D  + +S
Sbjct: 211 RGHAMELFQRMDPEGVAADAVTFLHVLDACGGVEAAGDVRRIHKKLELSGLEWDVFVASS 270

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  YG+ GCL +A++VFD M  ++ V+ +S++A+Y  +    E L+++  M  +G + D
Sbjct: 271 LVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKAD 330

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKI--KIDGPLGNSFIVMYSKCGDLLSAERT 253
            VT +S  +AC  + +L   R+IH  +L   I  + D  LG + + MY +CG L +A+  
Sbjct: 331 RVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSL 390

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +  + T +W A++  Y + G+ ++AL  +  M     +PN +T + +L +C+ +G L
Sbjct: 391 FDGMADKNTITWNALMGSYAQWGYGKEALNLYHSM---DAQPNSLTFLAMLTACSTVGAL 447

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +G++ H ++   G   E + +G AL+  Y +CG + +       +  + +++W + +  
Sbjct: 448 LQGRAAHARLAPAGFEKEVE-VGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLA 506

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
            A  G  +E L L  +M+  G+ PDS ++ ++L AC + G L+ G     ++I    +D 
Sbjct: 507 LAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRSYFTNMI----QDY 562

Query: 434 FVQSSL------IDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
            V  +L      +D+  + G    A  L + +  + S V W +++
Sbjct: 563 GVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAVTWTTLL 607



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 184/362 (50%), Gaps = 8/362 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+H  L ++GL +D   ++ L+ +Y + G L  ++ VFDT    ++     ++  Y  + 
Sbjct: 251 RIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLAAYAQHG 310

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF--DKDDVI 132
             EE++ +Y +M  +        + S L ACSS+G L  G  +H R++  G     D V+
Sbjct: 311 LGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQPDVVL 370

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            T++L  YG  G LD A+ +FD M  ++ ++W++++ SY       E L ++HSM     
Sbjct: 371 GTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLYHSM---DA 427

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +P+ +T L++  AC  + +L   R+ H  +     + +  +G + + MY KCG L  A  
Sbjct: 428 QPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLEDALG 487

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           TF K+E++   +WT  +      G F++ L  F +M      P+ + L+  L +C+  G 
Sbjct: 488 TFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSGK 547

Query: 313 LREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNML 370
           L+EG+S    +I+  G+ P   +    +++     G +   E++I ++  E + ++W  L
Sbjct: 548 LKEGRSYFTNMIQDYGVSPTLAHY-DCVVDLLCRTGLLGRAEELIDSMPFEPSAVTWTTL 606

Query: 371 IS 372
           ++
Sbjct: 607 LA 608



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 155/293 (52%), Gaps = 19/293 (6%)

Query: 390 MQTWGLMPDSFSVASSLSACGNVGS--LQLGLQIH-----------GHVIKIDC---KDE 433
           M   G+   + ++ SS+SAC  +GS  L  G ++H           G  + +     +D+
Sbjct: 1   MDLEGVPRSASNLVSSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDD 60

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFE--RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ-M 490
            V ++L+DMYSKCG  + A  +F+   +  K + +W +M+ G+  +G+S +A+ L+ + +
Sbjct: 61  LVATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFL 120

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            ++    D V  L+AI ACS+   L+ G+ +H ++ S  +    ++   L +MY +C +L
Sbjct: 121 SVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKEL 180

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A++ F+ ++ +N+VSW+ +I  Y   G    A  LF++M   G+  + VTF+++L AC
Sbjct: 181 HRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDAC 240

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
               +  + +     + + G+E D+   + +V+   + G +  A ++  +MP 
Sbjct: 241 GGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPL 293


>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
 gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
          Length = 847

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/666 (29%), Positives = 350/666 (52%), Gaps = 20/666 (3%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFK----EPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           ST +I++YA+ G +  +  +F+  +    +PD   W  ++  Y       E++LL+ KM 
Sbjct: 140 STAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHAREALLLFRKMD 199

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
            +      F + + + ACSS+  L  G  +H R++    + D V+  ++L  Y + G + 
Sbjct: 200 LQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVH 259

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC- 206
           ++R +F  M  ++VV+WS+I+A+Y  N      +++F  M+ +GV P+ VT +SL  +C 
Sbjct: 260 ESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKVTFVSLLFSCS 319

Query: 207 --GELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
             G +  L   R IH  +L+      D  +  + + MY +CG +  A+  F +++ R  T
Sbjct: 320 HAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNIT 379

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVLGSCAGLGWLREGKSVHC 321
           SW AM+  Y+ +    +AL  F  ML   E  +P+ IT ++   +C  +G L     +H 
Sbjct: 380 SWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHS 439

Query: 322 QIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
           +I +     + D  LG ALI+ Y  C ++++  +V+  +   N++SW  +I    +   +
Sbjct: 440 RISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISWTSMILACEQNEDN 499

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSL 439
           + A+ +   MQ  G  PD  ++ + + A  N+  L+ G++ H             V ++L
Sbjct: 500 EAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNAL 559

Query: 440 IDMYSKCGFKNLAYLLFERIQQKS---VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           + +Y   G    A  +F+ + Q+S   VV WNSM+  + QNG   +A+  F +M  +   
Sbjct: 560 VTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRH 619

Query: 497 MDEVTFLTAIQACS-NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
            D+ TF+  + AC+ +  +L +G  +H    + G+  DI +   L  MY++CG+L  A++
Sbjct: 620 PDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLLHMYSRCGNLSRARK 679

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VF +++++NVVSWSAM      +G  + A   F+ ML  GI+PN VTF++IL  CSH+G 
Sbjct: 680 VFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGL 739

Query: 616 VEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           ++E   Y  AM     ++P +QHYAC++DLL+R+G    A ++   +P P     W +LL
Sbjct: 740 MDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLPNPV---AWNSLL 796

Query: 675 NGCRIH 680
             C +H
Sbjct: 797 GACLVH 802



 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 190/699 (27%), Positives = 351/699 (50%), Gaps = 23/699 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L     NL     +H  ++ +G H D      LI+ Y    S+  +  VF T    + 
Sbjct: 2   LKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNV 61

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD--LGSGEKVH 118
           F W +LI  +  N  F E++ L+ +M         F + ++L ACS+LG   L  G+ +H
Sbjct: 62  FTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIH 121

Query: 119 GRIIKCGF----DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR----DVVSWSSIIAS 170
            RI + G     +   +  T+++  Y + G ++ A ++F++M  +    D+++W++++ +
Sbjct: 122 SRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTA 181

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           Y       E L +F  M  +G+EPD    ++  +AC  + SL     +H  +L   ++ D
Sbjct: 182 YNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECD 241

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
           G +GN+ +  Y+K G +  +   F  ++ +   +W+A+++ Y ++G  + A+E F +ML 
Sbjct: 242 GVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLL 301

Query: 291 VKEEPNLITLITVLGSCAGLGWLRE---GKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
               PN +T +++L SC+  G +++   G+ +H +I++         +  AL+  Y  CG
Sbjct: 302 DGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCG 361

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASS 405
            +S+ + V   +  RNI SWN ++  Y+    S EAL     M  +  G+ PD+ +  S+
Sbjct: 362 SVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSA 421

Query: 406 LSACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
             ACG +G L   ++IH  + +    +  D  + S+LI MY  C     A  + +++ + 
Sbjct: 422 ADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRT 481

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           +V+ W SMI    QN ++  AI ++  M L+  + D VT +T I+A +N+  L++G   H
Sbjct: 482 NVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFH 541

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM---SERNVVSWSAMIDCYGMHG 579
            +  ++G      +  AL  +Y   GDLQ A+ VF  +   S  +VV+W++M+  +  +G
Sbjct: 542 AQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNG 601

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS-VEEGKFYFNAMRIFGVEPDLQHY 638
             N A   F++ML  G  P++ TF+NIL AC+   S + +G          G++ D+   
Sbjct: 602 LPNQALGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVA 661

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
             ++ + SR G++  A K+ H++    N   W A+   C
Sbjct: 662 NTLLHMYSRCGNLSRARKVFHALT-QKNVVSWSAMAAAC 699



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 206/385 (53%), Gaps = 17/385 (4%)

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G++VH Q+I  G   +  YL   LI+ Y  C  + +   V H +  +N+ +W +LI 
Sbjct: 11  LDAGRAVHLQMITSGYHRDR-YLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIV 69

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS--LQLGLQIHGHV----I 426
            +   G+  EA+EL  +M   G+  D F+ ++ L AC N+G   L LG  IH  +    +
Sbjct: 70  AHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGL 129

Query: 427 KIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQ----QKSVVMWNSMICGFYQNGNSL 481
           K+      +  +++ID Y++ G    A  +FER+Q       ++ W +M+  + Q G++ 
Sbjct: 130 KLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHAR 189

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           EA+ LF +M L  LE D   F+ AI ACS+I  LE+G  +H +L++  V  D  +  AL 
Sbjct: 190 EALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALL 249

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           + YAK G +  ++ +F SM  +NVV+WSA++  Y  +G    A  LF++ML  G+ PN+V
Sbjct: 250 NFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKV 309

Query: 602 TFMNILWACSHSGSVEE----GKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           TF+++L++CSH+G +++     K +   ++      D+     +V++  R G +  A  +
Sbjct: 310 TFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTV 369

Query: 658 IHSMPFPANGSIWGALLNGCRIHKR 682
              M    N + W A+L    +++R
Sbjct: 370 FDEMQHR-NITSWNAMLVTYSLNQR 393


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 210/667 (31%), Positives = 358/667 (53%), Gaps = 30/667 (4%)

Query: 95  NFIYPSVLRACSSL--GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
            F  P   R+C  L  G   +G +VH    K G   D  +  S++  YG  G ++DA KV
Sbjct: 66  RFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKV 125

Query: 153 FDKM--TSRDVVSWSSIIASYFDNADVSEGLKMFHS-MVREGVEPDFVTMLSLAEACGEL 209
           F  +   +R++VSW++++A+   + D   GL++F   +V  G   D  T++++   C  L
Sbjct: 126 FGGIPDAARNIVSWNALMAAL--SGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAAL 183

Query: 210 CSLRPARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
                 R++HG  L  K   D P  +GN+ + MY+KCG+L  AER F   E     SW  
Sbjct: 184 GWSETGRAVHG--LAAKSGWDAPARVGNALVDMYAKCGELADAERAFP--EAPSVVSWNV 239

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNL----ITLITVLGSCAGLGWLREGKSVHCQI 323
           M+  Y R+     A    ++ +++KE  ++    IT+++VL +C+G   L   + +H   
Sbjct: 240 MLGAYTRNREAGAAF-GLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFT 298

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           +R+G+    D +  AL+  Y  CG++   ++V   I  + + SWN LIS +A++  +  A
Sbjct: 299 VRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNTAA-A 357

Query: 384 LELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           +EL +QM    GL PD FS+ S L AC +   L      HG +++    +D  +++SL+ 
Sbjct: 358 IELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLS 417

Query: 442 MYSKCGFKN-LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL---NCLEM 497
            Y +C     LA +LF+ +++K  V+W +MI G+ QNG   E++ LF +M     +C  +
Sbjct: 418 AYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSV 477

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
             ++  +A+ ACS +  +  GK +H   +   +  D ++ ++L DMY+KCG ++ A+  F
Sbjct: 478 --ISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFF 535

Query: 558 DSMSERNV-VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           D +  R+  VSW+AMI  Y ++G   +A  L+ +M   G++P+E T++ +L AC H+G +
Sbjct: 536 DRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGML 595

Query: 617 EEGKFYFNAMR--IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           EEG  +F+ MR     +E  L+HY+C++ +LSR+G    A  ++  MP   +  I  ++L
Sbjct: 596 EEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVL 655

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           + C IH   ++   + + L     +   +Y L SN+YA    WD+  KVR ++   G+ K
Sbjct: 656 SACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAK 715

Query: 735 VPGYSTI 741
            PG S I
Sbjct: 716 EPGCSWI 722



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 244/504 (48%), Gaps = 27/504 (5%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDL 247
           EG+ PD  T+   A +CG L     A     H L  K+ + G   +GNS + MY +CG +
Sbjct: 60  EGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRV 119

Query: 248 LSAERTFVKIE--KRCTTSWTAMISCYNRSGWFQKALESFVK-MLEVKEEPNLITLITVL 304
             AE+ F  I    R   SW A+++    SG  ++ LE F   ++ V    +  TL+TVL
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMAAL--SGDPRRGLELFRDCLVAVGGMVDEATLVTVL 177

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
             CA LGW   G++VH    + G       +G AL++ YA+CG++++ E+        ++
Sbjct: 178 PMCAALGWSETGRAVHGLAAKSGWDAPA-RVGNALVDMYAKCGELADAERAFPEAP--SV 234

Query: 365 LSWNMLISEYARKGMSKEALELL--VQMQTWGLMP-DSFSVASSLSACGNVGSLQLGLQI 421
           +SWN+++  Y R   +  A  LL  +Q++  G +P D  +V S L AC     L    ++
Sbjct: 235 VSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLREL 294

Query: 422 HGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           H   ++  +D   + V ++L+  Y +CG    A  +F  I++K+V  WN++I    Q  N
Sbjct: 295 HAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQ-N 353

Query: 480 SLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +  AI LF QM   C L+ D  +  + + AC++   L   K  H  ++  G+ +D  I  
Sbjct: 354 TAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRA 413

Query: 539 ALTDMYAKCGDLQTAQRV-FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGI 596
           +L   Y +C   +   RV FD+M E+  V W AMI  Y  +G   ++  LF++M    G 
Sbjct: 414 SLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGH 473

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH----YACMVDLLSRSGDIE 652
             + ++  + L ACS   SV  GK     M  F ++ DL       + ++D+ S+ G +E
Sbjct: 474 CSSVISATSALMACSELSSVRLGK----EMHCFALKADLCDDPFLSSSLIDMYSKCGFVE 529

Query: 653 GAFKMIHSMPFPANGSIWGALLNG 676
            A      +        W A++ G
Sbjct: 530 DARTFFDRLKARDAKVSWTAMITG 553



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 38/311 (12%)

Query: 3   LFRSCTNLRKLTRL---HAHLLVTGLHYDPPASTRLIESYAEMGSLRS-SRLVFDTFKEP 58
           L  +C + + L  +   H  +L  GL  D      L+ +Y         +R++FD  +E 
Sbjct: 380 LLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEK 439

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYP-SVLRACSSLGDLGSGEKV 117
              +W  +I  Y  N    ES+ L+ +M   +   S+ I   S L ACS L  +  G+++
Sbjct: 440 GEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEM 499

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV-VSWSSIIASYFDNAD 176
           H   +K     D  + +S++  Y + G ++DAR  FD++ +RD  VSW+++I  Y  N  
Sbjct: 500 HCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGL 559

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E ++++  M REG+EPD  T L L  ACG           H  +L   ++    + N 
Sbjct: 560 GREAVELYGKMRREGMEPDEFTYLGLLMACG-----------HAGMLEEGLRFFDEMRNH 608

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
                          +  VK+E      ++ +I   +R+G F  A+     M E+ +EP+
Sbjct: 609 H-------------HKIEVKLEH-----YSCVIGMLSRAGRFADAV---ALMAEMPQEPD 647

Query: 297 LITLITVLGSC 307
              L +VL +C
Sbjct: 648 AKILSSVLSAC 658


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 195/652 (29%), Positives = 348/652 (53%), Gaps = 7/652 (1%)

Query: 93   ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCT-YGEFGCLDDAR 150
            + ++ Y  +L+ C + GD   G  VHG +++ G   + D+   ++L   Y + G    A 
Sbjct: 426  VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAH 485

Query: 151  KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            +VFD +  R++VS+ +++  +    +  E   +F  +  EG E +   + ++ +    + 
Sbjct: 486  RVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMD 545

Query: 211  SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            +L  A  +H    +     +  +G++ I  YS CG +  A R F  I  +   +WTAM+S
Sbjct: 546  TLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVS 605

Query: 271  CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            CY+ +   +  L+ F KM     + N   L +VL +   L  +  GK +H   ++     
Sbjct: 606  CYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDT 665

Query: 331  EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
            E    G AL++ YA+CG + +       +   +++ W+++IS YA+   +++A EL ++M
Sbjct: 666  ERHVYG-ALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRM 724

Query: 391  QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFK 449
                + P+ FS++S L AC N+  L LG QIH H IKI  + E FV ++LID+Y+KC   
Sbjct: 725  MRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDM 784

Query: 450  NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
              +  +F  ++  + V WN++I G+ ++G    A+++F +M    +   +VT+ + ++AC
Sbjct: 785  ESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRAC 844

Query: 510  SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            ++   +     VH  +       D  +  +L D YAKCG ++ A+ +F+++ E ++VSW+
Sbjct: 845  ASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWN 904

Query: 570  AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI- 628
            A+I  Y +HGQ   A  LF  M  + IK N++TF+ +L  C  +G V +G   F++MR+ 
Sbjct: 905  AIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLD 964

Query: 629  FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK- 687
             G+EP ++HY C+V LL R+G +  A   I  +P   +  +W ALL+ C +HK +++ + 
Sbjct: 965  HGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRF 1024

Query: 688  TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            + EK L +    D   Y LLSN+Y+  G+ D+    R  M   G++K PG S
Sbjct: 1025 SAEKVLEIE-PQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLS 1075



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/628 (25%), Positives = 312/628 (49%), Gaps = 11/628 (1%)

Query: 16   LHAHLLVTG--LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            +H H++ +G     D   +  L+  Y ++G   S+  VFD   E +   +  L++ +   
Sbjct: 450  VHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALR 509

Query: 74   NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
              FEE+  L+ ++  E   ++ F+  +VL+   ++  LG    VH    K G D++  + 
Sbjct: 510  GEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVG 569

Query: 134  TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            ++++  Y   G + DAR+VFD +  +D V+W+++++ Y +N      L++F  M     +
Sbjct: 570  SALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSK 629

Query: 194  PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
             +   + S+  A   L S+   + IH   ++     +  +  + + MY+KCG++  A   
Sbjct: 630  LNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLA 689

Query: 254  FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
            F  +       W+ MIS Y +    ++A E F++M+     PN  +L +VL +CA +  L
Sbjct: 690  FEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLL 749

Query: 314  REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
              GK +H   I+ G   E  ++G ALI+ YA+C  M    ++  ++ + N +SWN +I  
Sbjct: 750  DLGKQIHNHAIKIGHESEL-FVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVG 808

Query: 374  YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
            Y++ G  + AL +  +M+   +     + +S L AC +  S+    Q+H  + K     D
Sbjct: 809  YSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSD 868

Query: 433  EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
              V +SLID Y+KCG    A  +FE +++  +V WN++I G+  +G +  A  LF  M  
Sbjct: 869  TIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSK 928

Query: 493  NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQ 551
            N ++ +++TF+  +  C + G + +G  +   + + +G+   +   T +  +  + G L 
Sbjct: 929  NSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLN 988

Query: 552  TAQR-VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILWA 609
             A   + D  S  + + W A++    +H  +       +++L+  I+P +E T++ +   
Sbjct: 989  DALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLE--IEPQDETTYVLLSNM 1046

Query: 610  CSHSGSVEEGKFYFNAMRIFGV--EPDL 635
             S +GS+++  F+  +MR  GV  EP L
Sbjct: 1047 YSAAGSLDQVAFFRKSMRNIGVRKEPGL 1074



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 108/208 (51%), Gaps = 3/208 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C N+  L    ++H H +  G   +      LI+ YA+   + SS  +F + ++ +
Sbjct: 739 VLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVN 798

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  + F E ++ ++ +M       +   Y SVLRAC+S   +    +VH 
Sbjct: 799 EVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHC 858

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K  F+ D ++  S++ +Y + GC+ DAR++F+ +   D+VSW++II+ Y  +   + 
Sbjct: 859 LIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAM 918

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACG 207
             ++F  M +  ++ + +T ++L   CG
Sbjct: 919 AQELFDMMSKNSIKANDITFVALLSVCG 946


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 197/602 (32%), Positives = 314/602 (52%), Gaps = 75/602 (12%)

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           E +  T  S+ + C    SL   + +H  +    + +D  LG   + +Y+ CGDL    R
Sbjct: 96  ELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRR 155

Query: 253 TFVKIEK---------------------------------------------------RC 261
            F  +EK                                                   R 
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRD 215

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SW +MIS Y  +G  ++ LE + +M+ +  + +L T+I+VL  CA  G L  GK+VH 
Sbjct: 216 VISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             I+       ++    L++ Y++CG +    +V   +GERN++SW  +I+ Y R G S 
Sbjct: 276 LAIKSTFERRINF-SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD 334

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLI 440
            A+ LL QM+  G+  D  +  S L AC   GSL  G  +H ++   + +   FV ++L+
Sbjct: 335 GAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALM 394

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMY+KCG  + A  +F  +  K ++ WN+MI                       L+ D  
Sbjct: 395 DMYTKCGSMDGANSVFSTMVVKDIISWNTMI---------------------GELKPDSR 433

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T    + AC+++  LE+GK +H  ++  G   D ++  AL D+Y KCG L  A+ +FD +
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG- 619
             +++VSW+ MI  YGMHG  N+A + F +M D+GI+P+EV+F++IL+ACSHSG +E+G 
Sbjct: 494 PSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           +F++     F +EP L+HYACMVDLLSR+G++  A++ I ++P   + +IWGALL GCRI
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRI 613

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +  I++ + + + +      + GYY LL+NIYAE   W+E  ++R  +   GL+K PG S
Sbjct: 614 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCS 673

Query: 740 TI 741
            I
Sbjct: 674 WI 675



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 270/578 (46%), Gaps = 90/578 (15%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C   + LT   ++H+ +    +  D     +L+  YA  G L+  R VFDT ++ + ++W
Sbjct: 109 CAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLW 168

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
                     NF          M+ E A I +F                           
Sbjct: 169 ----------NF----------MVSEYAKIGDF--------------------------- 181

Query: 124 CGFDKDDVIQTSILCTYG-EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
               K+ +    I+   G E    + A ++FDK+  RDV+SW+S+I+ Y  N     GL+
Sbjct: 182 ----KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLE 237

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           ++  M+  G++ D  T++S+   C    +L   +++H   ++   +      N+ + MYS
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYS 297

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGDL  A R F K+ +R   SWT+MI+ Y R G    A+    +M +   + +++   +
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTS 357

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +CA  G L  GK VH  I    M     ++  AL++ Y +CG M     V   +  +
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNL-FVCNALMDMYTKCGSMDGANSVFSTMVVK 416

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +I+SWN +I E                     L PDS ++A  L AC ++ +L+ G +IH
Sbjct: 417 DIISWNTMIGE---------------------LKPDSRTMACILPACASLSALERGKEIH 455

Query: 423 GHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G++++     D  V ++L+D+Y KCG   LA LLF+ I  K +V W  MI G+  +G   
Sbjct: 456 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGN 515

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL- 540
           EAI  F++M    +E DEV+F++ + ACS+ G LE+G W       Y ++ D  I+  L 
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG-WRFF----YIMKNDFNIEPKLE 570

Query: 541 -----TDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
                 D+ ++ G+L  A    +++    +   W A++
Sbjct: 571 HYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 213/473 (45%), Gaps = 77/473 (16%)

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           R  T + A I  + + G  + A+E  V M + K E    T  +VL  CAG   L +GK V
Sbjct: 64  RQVTDYNAKILHFCQLGNLENAME-LVCMCQ-KSELETKTYSSVLQLCAGSKSLTDGKKV 121

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR--- 376
           H  II+       + LG  L+  YA CG + E  +V   + ++N+  WN ++SEYA+   
Sbjct: 122 H-SIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 377 ------------------------------------------------KGMSKEALELLV 388
                                                            G+++  LE+  
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCG 447
           QM   G+  D  ++ S L  C N G+L LG  +H   IK   +      ++L+DMYSKCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
             + A  +FE++ +++VV W SMI G+ ++G S  AI L  QM    +++D V   + + 
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           AC+  G L+ GK VH  + +  +  ++++  AL DMY KCG +  A  VF +M  ++++S
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIIS 420

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+ MI      G+L               KP+  T   IL AC+   ++E GK     + 
Sbjct: 421 WNTMI------GEL---------------KPDSRTMACILPACASLSALERGKEIHGYIL 459

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
             G   D      +VDL  + G + G  +++  M    +   W  +++G  +H
Sbjct: 460 RNGYSSDRHVANALVDLYVKCG-VLGLARLLFDMIPSKDLVSWTVMISGYGMH 511



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 123/294 (41%), Gaps = 66/294 (22%)

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL----EMDEVTFLTAIQACSNIG 513
           R   + V  +N+ I  F Q GN      L + M L C+    E++  T+ + +Q C+   
Sbjct: 60  RTIDRQVTDYNAKILHFCQLGN------LENAMELVCMCQKSELETKTYSSVLQLCAGSK 113

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN--------- 564
            L  GK VH  + S  V  D  +   L  +YA CGDL+  +RVFD+M ++N         
Sbjct: 114 SLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVS 173

Query: 565 ------------------------------------------VVSWSAMIDCYGMHGQLN 582
                                                     V+SW++MI  Y  +G   
Sbjct: 174 EYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTE 233

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
               ++KQM+  GI  +  T +++L  C++SG++  GK   +       E  +     ++
Sbjct: 234 RGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLL 293

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID----VMKTIEKE 692
           D+ S+ GD++GA ++   M    N   W +++ G     R D    +++ +EKE
Sbjct: 294 DMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKE 346



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 52/114 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S + L +   +H ++L  G   D   +  L++ Y + G L  +RL+FD     D 
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + +  E+I  +++M           + S+L ACS  G L  G
Sbjct: 499 VSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552


>gi|302761660|ref|XP_002964252.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
 gi|300167981|gb|EFJ34585.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
          Length = 740

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 221/709 (31%), Positives = 365/709 (51%), Gaps = 14/709 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  NL +  +LHA  +   L  +   +  LI  Y +  SL  +  +F + +  D   W  
Sbjct: 22  SSGNLARGRQLHAAAIARRLDRETLLANSLIAMYGKCHSLAEAERLFHSLERKDPVTWNT 81

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  +  N     ++ LY +M         F+   VL ACS+LGDL  G  V   I    
Sbjct: 82  MIGAFTHNGQPRLAVDLYARMGSGDRNSVTFL--GVLEACSALGDLDLGRTVDSSIAGSE 139

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           +  D V+ T+++  YG    +++AR+ FD M  ++VVSW++++ SY  N      L+   
Sbjct: 140 WRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVVSWNALVTSYARNGHPCGALRALR 199

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M  +G + + VT L + E   +L SL   RSIH  + R        L N+ I MY K  
Sbjct: 200 EMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRITRGGDGGGTRLENALISMYGKLE 259

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVL 304
           +L  + R F  +  +   SWTAMI+ Y ++G  + ALE + +M LE +  P+ +T   VL
Sbjct: 260 NLEESLRVFEVMANKDVVSWTAMITAYAQNGHERLALELYRRMELEKRVRPDRVTYAAVL 319

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
           G+C+GLG L  GK ++ ++       +   L  +L+  Y +C  + + ++V  +I  R+ 
Sbjct: 320 GACSGLGDLSTGKEIYARVCSSDFDVDA-ALKTSLVGLYGKCHCLEDAKEVFDSISSRDR 378

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           L++N +++ YA+ G   +AL L  QM    G+ P   S A +L AC  +  L  G  +HG
Sbjct: 379 LAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHG 438

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            +     K DE + ++L+  Y + G    A  +FE++  K V  +++MI  + QNG    
Sbjct: 439 RIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGR 498

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A+ ++ +M    ++ DEV F++ + ACS+    E    VH +++  G   D  + TAL  
Sbjct: 499 AMTIYAEMDQQGIKPDEVAFISVLSACSSNLATE----VHTEIVHAGFEADGALGTALVC 554

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MYAK G+L+ ++R+F +M  R+ VSW+AMI  +  HG   +A  LF+ M   GI     T
Sbjct: 555 MYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFARHG--CEAKLLFQGMALDGIDAKGST 612

Query: 603 FMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
             ++L + S SG V+  + +F AM+  FG  P  +HY+C+VDLL+RSG +  A +++ SM
Sbjct: 613 LTSMLVSYSQSG-VDAARGFFVAMQGDFGTCPAAEHYSCLVDLLARSGRVGEAKELVDSM 671

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
           P   +   W  LL  C+ H  ++  K+  + +    ++  G Y +LS +
Sbjct: 672 PLEPDFVPWMTLLGACKTHGDLEQAKSAARGVLEVDSHSPGAYLVLSTL 720



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 302/584 (51%), Gaps = 11/584 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S + AC+S G+L  G ++H   I    D++ ++  S++  YG+   L +A ++F  +  +
Sbjct: 15  SAISACASSGNLARGRQLHAAAIARRLDRETLLANSLIAMYGKCHSLAEAERLFHSLERK 74

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           D V+W+++I ++  N      + ++  M     + + VT L + EAC  L  L   R++ 
Sbjct: 75  DPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEACSALGDLDLGRTVD 132

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             +   + + D  +G + + MY +C  +  A + F  +  +   SW A+++ Y R+G   
Sbjct: 133 SSIAGSEWRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVVSWNALVTSYARNGHPC 192

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
            AL +  +M     + N +T + V+     LG L  G+S+H +I R G       L  AL
Sbjct: 193 GALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRITRGGD-GGGTRLENAL 251

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPD 398
           I  Y +   + E  +V   +  ++++SW  +I+ YA+ G  + ALEL  +M+    + PD
Sbjct: 252 ISMYGKLENLEESLRVFEVMANKDVVSWTAMITAYAQNGHERLALELYRRMELEKRVRPD 311

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
             + A+ L AC  +G L  G +I+  V   D   D  +++SL+ +Y KC     A  +F+
Sbjct: 312 RVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLYGKCHCLEDAKEVFD 371

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLE 516
            I  +  + +N+M+  + QNG+  +A+NL+ QM  L  +E  + +F  A+ AC+ +  L 
Sbjct: 372 SISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLV 431

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK +H ++   G++ D  + T L   Y + G L+ A+R+F+ M  ++V S+SAMI  Y 
Sbjct: 432 TGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYS 491

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            +G    A +++ +M   GIKP+EV F+++L ACS + + E      +A    G E D  
Sbjct: 492 QNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSSNLATEVHTEIVHA----GFEADGA 547

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
               +V + ++SG++E + ++  +M    + S W A+++    H
Sbjct: 548 LGTALVCMYAKSGNLEESRRIFGAMKSRDSVS-WTAMISAFARH 590



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 270/573 (47%), Gaps = 47/573 (8%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P   T++S   AC    +L   R +H   + R++  +  L NS I MY KC  L  AER 
Sbjct: 8   PHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLLANSLIAMYGKCHSLAEAERL 67

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +E++   +W  MI  +  +G  + A++ + +M     + N +T + VL +C+ LG L
Sbjct: 68  FHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEACSALGDL 125

Query: 314 REGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             G++V   I     G E+     +G A++  Y  C  + E  +   ++  +N++SWN L
Sbjct: 126 DLGRTVDSSI----AGSEWRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVVSWNAL 181

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           ++ YAR G    AL  L +M   G   +  +    +     +GSL LG  IH  + +   
Sbjct: 182 VTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRITRGGD 241

Query: 431 KDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
                ++++LI MY K      +  +FE +  K VV W +MI  + QNG+   A+ L+ +
Sbjct: 242 GGGTRLENALISMYGKLENLEESLRVFEVMANKDVVSWTAMITAYAQNGHERLALELYRR 301

Query: 490 MYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           M L   +  D VT+   + ACS +G L  GK ++ ++ S     D  + T+L  +Y KC 
Sbjct: 302 MELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLYGKCH 361

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNIL 607
            L+ A+ VFDS+S R+ ++++AM+  Y  +G  +DA +L++QM+D  G++P + +F   L
Sbjct: 362 CLEDAKEVFDSISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVAL 421

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP----F 663
            AC+    +  GK     +++ G++ D      +V      G +E A ++   MP    F
Sbjct: 422 MACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVF 481

Query: 664 PANGSIWGALLNGCR-----IHKRIDVMKTIEKE------LSVTGTN------------- 699
             +  I     NGC      I+  +D       E      LS   +N             
Sbjct: 482 SYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSSNLATEVHTEIVHAG 541

Query: 700 ---DNGYYTLLSNIYAEEGNWDE----FGKVRS 725
              D    T L  +YA+ GN +E    FG ++S
Sbjct: 542 FEADGALGTALVCMYAKSGNLEESRRIFGAMKS 574


>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 2000

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 221/704 (31%), Positives = 361/704 (51%), Gaps = 103/704 (14%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+  ++ G +  G  +H  + K G   +  I   +L  Y  +    +A ++       
Sbjct: 26  SLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGF 85

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           D+V  + +I++     ++ E  K+F  M +   E  +  ++S                  
Sbjct: 86  DLVVHNCMISANVQRGNLDEARKLFDEMPQTN-EISWTALIS------------------ 126

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
                                + K G +  +   F +   +   SWTA IS Y ++G+  
Sbjct: 127 --------------------GFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSV 166

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG------------ 327
           +A++ F+K+LE + +PN +T  +V+ +CA LG    G SV   I++ G            
Sbjct: 167 EAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLI 226

Query: 328 -----MGP------------EYDYLG-PALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
                MG             E D +   A+++ Y E  ++ E  ++   + +RN +SW+ 
Sbjct: 227 TLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSA 286

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I+ Y + G  +E+L L  +M   G  P+    +S LSA  +V +LQ G+ IHGHV KI 
Sbjct: 287 MIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIG 346

Query: 430 C-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             KD FV SSLIDMY KCG       LF+ I +K++V WN+M+ G+  NG+  EA  LF+
Sbjct: 347 FEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFN 406

Query: 489 QM--------------YLNCLEMDEV-----------------TFLTAIQACSNIGQLEK 517
            M              +L+C + DE+                 TF + + AC++   L+K
Sbjct: 407 IMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDK 466

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H K++  G++ D Y+ TALTDMYAK GD++++++VF+ M ++N VSW+AMI     
Sbjct: 467 GKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAE 526

Query: 578 HGQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDL 635
            G   ++ +LF++M   S I PNEV F+ +L+ACSHSG V++G +YFN+M  ++G++P  
Sbjct: 527 SGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKG 586

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +H+ C+VD+LSR+G +  A + I+SMPF    + W ALL+GC+ +K  ++ + +  +L  
Sbjct: 587 RHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWE 646

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
               +   Y LLSNIYA  G W +  KVR +M+  GLKK  G S
Sbjct: 647 MAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCS 690



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 239/545 (43%), Gaps = 129/545 (23%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRL------------------------ 35
           L ++ TN   +R  + LHAHL  TG+  +   S +L                        
Sbjct: 27  LLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFD 86

Query: 36  -------IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY---------MW------- 72
                  I +  + G+L  +R +FD   + +   W  LI  +         MW       
Sbjct: 87  LVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPF 146

Query: 73  ---------------NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                          N F  E++ L+ K++  +   +   + SV+RAC++LGD G G  V
Sbjct: 147 QNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSV 206

Query: 118 HGRIIKCGFDKD------------------------------DVIQ-TSILCTYGEFGCL 146
            G I+K G++ D                              DV+  T+IL  Y E   L
Sbjct: 207 LGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDEL 266

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            +AR++FD+M  R+ VSWS++IA Y  +    E L++F  M++EG +P+     S+  A 
Sbjct: 267 GEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSAL 326

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
             + +L+   +IHGHV +   + D  + +S I MY KCG+       F  I ++   SW 
Sbjct: 327 ASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWN 386

Query: 267 AMISCYNRSG-------------------W------------FQKALESFVKMLEVKEEP 295
           AM+  Y+ +G                   W            F +  E F +M+ + E P
Sbjct: 387 AMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIP 446

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N  T  ++L +CA    L +GK++H +I++ G+  +  Y+G AL + YA+ G +   +KV
Sbjct: 447 NKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCD-TYVGTALTDMYAKSGDIESSKKV 505

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGS 414
            + + ++N +SW  +I   A  G+++E+L L  +M+ T  + P+     + L AC + G 
Sbjct: 506 FNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGL 565

Query: 415 LQLGL 419
           +  GL
Sbjct: 566 VDKGL 570



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 190/380 (50%), Gaps = 47/380 (12%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           T +++ Y EM  L  +R +FD   + +   W+ +I  Y  + + EES+ L+ +MI+E   
Sbjct: 254 TAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFK 313

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY--------GEF- 143
            +   + S+L A +S+  L +G  +HG + K GF+KD  + +S++  Y        G F 
Sbjct: 314 PNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFL 373

Query: 144 ----------------------GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
                                 G +++A+ +F+ M  R+ VSWS+IIA + D     E  
Sbjct: 374 FDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMF 433

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F+ M+  G  P+  T  SL  AC    SL   +++HG +++  I+ D  +G +   MY
Sbjct: 434 EVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMY 493

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITL 300
           +K GD+ S+++ F ++ K+   SWTAMI     SG  +++L  F +M +     PN +  
Sbjct: 494 AKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMF 553

Query: 301 ITVLGSCAGLGWLREG-------KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
           + VL +C+  G + +G       ++V+      G+ P+  +    +++  +  G++ E E
Sbjct: 554 LAVLFACSHSGLVDKGLWYFNSMEAVY------GLKPKGRHF-TCVVDMLSRAGRLFEAE 606

Query: 354 KVIHAIG-ERNILSWNMLIS 372
           + I+++  +    +W  L+S
Sbjct: 607 EFIYSMPFQPETNAWAALLS 626



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 54/267 (20%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T ++ ++  +N G +  G  +H  L   G+  + YI   L  MY        A ++    
Sbjct: 23  TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT------------------ 602
              ++V  + MI      G L++A  LF +M  +    NE++                  
Sbjct: 83  DGFDLVVHNCMISANVQRGNLDEARKLFDEMPQT----NEISWTALISGFMKYGRVRESM 138

Query: 603 -------FMNIL-WACSHSGSVEEGKFYFNAMRIF------GVEPDLQHYACMVDLLSRS 648
                  F N++ W  + SG V+ G F   AM++F       V+P+   +  +V   +  
Sbjct: 139 WYFERNPFQNVVSWTAAISGYVQNG-FSVEAMKLFIKLLESEVKPNKVTFTSVVRACANL 197

Query: 649 GDIE---GAFKMIHSMPFPANGSIWGALLNGC----RIHKRIDVMKTIEKELSVTGTNDN 701
           GD         +I    +  + ++  +L+  C     IH   +V   +E++  V+     
Sbjct: 198 GDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVS----- 252

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIME 728
             +T + ++Y E    DE G+ R I +
Sbjct: 253 --WTAILDLYVE---MDELGEARRIFD 274


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 204/639 (31%), Positives = 350/639 (54%), Gaps = 9/639 (1%)

Query: 110 DLGSGEKVHGRIIKCGFDKD-DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
            L  G+ +H  IIK  +    + +  +++  Y + G L  A+ VF+ +  ++VVS++ +I
Sbjct: 22  SLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLI 81

Query: 169 ASYFDNADVSEG--LKMFHSMVREGVEPDFVTMLSL--AEACGELCSLRPARSIHGHVLR 224
                N        L++F  M+   + PD  T   +  A A    C+   AR +H   ++
Sbjct: 82  HGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNF-DARQVHVLGIK 140

Query: 225 RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
                D  +G+S +  Y K G +  A + F ++ +R   SWT MIS Y      ++AL  
Sbjct: 141 TASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGV 200

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F  M  V+   N     +VL +     ++  GK VHC +++ G+  E+  +  AL+  YA
Sbjct: 201 FGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGV-LEFVSVLNALVTMYA 259

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG ++    +     ++N ++W+ LI+ Y++ G S +AL+L  +M   G +P  F++  
Sbjct: 260 KCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVG 319

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            L AC +V +++ G Q HG+++K   + + +  ++L+DMY+K GF   A   F+ + +  
Sbjct: 320 VLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPD 379

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           +V+W S+I G+ QNG + EA++++ +M +  +  +E+T  + ++ACSN+  LE+GK +H 
Sbjct: 380 LVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHA 439

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
           + I YG+  ++ I +AL+ MYAKCG L+    +F  M +R++VSW+AMI     +G   +
Sbjct: 440 RTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGRE 499

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMV 642
           A  LF++M   G KP+ +TF+ +L ACSH G V+ G  YFN M   F + P ++HYACMV
Sbjct: 500 ALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMV 559

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           D+LSR+G +  A + I S        +W  LL  CR H   ++     ++L   G+ ++ 
Sbjct: 560 DVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESS 619

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            Y LLS+IY   G   +  +VR +M+V G++K  G S I
Sbjct: 620 AYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWI 658



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 169/563 (30%), Positives = 294/563 (52%), Gaps = 19/563 (3%)

Query: 9   NLRKLTRLHAHLL-VTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           +L+K   LHAH++ +  L      +  LI+ YA+ G L  ++LVF+  K  +   +  LI
Sbjct: 22  SLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLI 81

Query: 68  KCYMWN-----NFFEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLGSGEKVHGRI 121
                N     NF  E   L+ +MI          +P V  A + +LG      +VH   
Sbjct: 82  HGLSHNGSKGSNFVLE---LFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLG 138

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK     D  + +S++  Y + GC+ +ARK+FD+M  R++VSW+++I+ Y       E L
Sbjct: 139 IKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEAL 198

Query: 182 KMFHSM-VREGVEPDFV-TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +F  M + EG   +FV T +  A  C E   +   + +H  V++  +     + N+ + 
Sbjct: 199 GVFGLMRLVEGNLNEFVFTSVLSALVCPEF--VDSGKQVHCVVVKNGVLEFVSVLNALVT 256

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG+L  +   F     +   +W+A+I+ Y+++G   KAL+ F KM      P+  T
Sbjct: 257 MYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFT 316

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L+ VL +C+ +  + EGK  H  +++ G   +  Y   AL++ YA+ G   +  K    +
Sbjct: 317 LVGVLKACSDVAAIEEGKQTHGYLLKSGYETQI-YTATALVDMYAKFGFTGDARKGFDFL 375

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E +++ W  +I+ Y + G ++EAL +  +MQ   ++P+  ++AS L AC N+ +L+ G 
Sbjct: 376 LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGK 435

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIH   IK     E  ++S+L  MY+KCG      L+F R+ Q+ +V WN+MI G  QNG
Sbjct: 436 QIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNG 495

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYI 536
           +  EA+ LF +M L   + D +TF+T + ACS++G +++G W +  ++   + +   +  
Sbjct: 496 HGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRG-WAYFNMMFDEFCLVPRVEH 554

Query: 537 DTALTDMYAKCGDLQTAQRVFDS 559
              + D+ ++ G L  A+   +S
Sbjct: 555 YACMVDVLSRAGKLNEAKEFIES 577



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 253/542 (46%), Gaps = 42/542 (7%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    + L+  Y ++G +  +R +FD   E +   W  +I  Y      +E++ ++  M 
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR 205

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
             +  ++ F++ SVL A      + SG++VH  ++K G  +   +  +++  Y + G L+
Sbjct: 206 LVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLN 265

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
            +  +F+  + ++ ++WS++I  Y    D  + LK+F  M   G  P   T++ + +AC 
Sbjct: 266 YSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACS 325

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           ++ ++   +  HG++L+   +       + + MY+K G    A + F  + +     WT+
Sbjct: 326 DVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTS 385

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I+ Y ++G  ++AL  + +M   K  PN +T+ +VL +C+ L  L +GK +H + I+ G
Sbjct: 386 IIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYG 445

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +GPE   +  AL   YA+CG + E   +   + +R+I+SWN +IS  ++ G  +EALEL 
Sbjct: 446 LGPELS-IRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELF 504

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSK 445
            +M+  G  PD  +  + LSAC ++G ++ G      +    C    V+  + ++D+ S+
Sbjct: 505 EEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSR 564

Query: 446 CGFKNLAYLLFER-IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
            G  N A    E  I    + +W  +                                  
Sbjct: 565 AGKLNEAKEFIESAIIDHGMCLWRIL---------------------------------- 590

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRK-DIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
            + AC N    E G +   KL+  G R+   Y+   L+ +Y   G L    RV   M  R
Sbjct: 591 -LPACRNHCNYELGAYAGEKLMELGSRESSAYV--LLSSIYTAMGRLADVVRVRRMMKVR 647

Query: 564 NV 565
            V
Sbjct: 648 GV 649



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 114/210 (54%), Gaps = 3/210 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+++  +    + H +LL +G       +T L++ YA+ G    +R  FD   EPD
Sbjct: 320 VLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPD 379

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             +W  +I  Y+ N   EE++ +Y +M   +   +     SVL+ACS+L  L  G+++H 
Sbjct: 380 LVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHA 439

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R IK G   +  I++++   Y + G L++   +F +M  RD+VSW+++I+    N    E
Sbjct: 440 RTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGRE 499

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
            L++F  M  EG +PD +T +++  AC  +
Sbjct: 500 ALELFEEMRLEGTKPDHITFVTVLSACSHM 529



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 6/285 (2%)

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD--EFVQSSLIDMYSKCGFKNLAYL 454
           P + S  + L    +  SL+ G  +H H+IKI       ++ ++LI  Y+KCG  + A L
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64

Query: 455 LFERIQQKSVVMWNSMICGFYQNGN--SLEAINLFHQMYLNCLEMDEVTFLTAIQACS-N 511
           +FE ++ K+VV +N +I G   NG+  S   + LF +M  N +  D  TF     A + N
Sbjct: 65  VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G     + VH   I      D+++ ++L + Y K G +  A+++FD M ERN+VSW+ M
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I  Y       +A  +F  M       NE  F ++L A      V+ GK     +   GV
Sbjct: 185 ISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGV 244

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              +     +V + ++ G++  +  M+  M    N   W AL+ G
Sbjct: 245 LEFVSVLNALVTMYAKCGNLNYSL-MLFEMCSDKNAITWSALITG 288


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 214/673 (31%), Positives = 361/673 (53%), Gaps = 18/673 (2%)

Query: 81  LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY 140
           L+    IR   +++   + S+L++C    D   G+ VH R+I+   + D V+  S++  Y
Sbjct: 51  LMARDGIRPMDSVT---FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLY 107

Query: 141 GEFGCLDDARKVFDKMT---SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
            + G    A  VF+ M     RDVVSWS+++A Y +N    + +K+F   +  G+ P+  
Sbjct: 108 SKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDY 167

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLL-SAERTFV 255
              ++  AC     +   R   G +++    + D  +G S I M+ K  +   +A + F 
Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+ +    +WT MI+   + G+ ++A+  F+ M+    E +  TL +V  +CA L  L  
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAEC---GKMSECEKVIHAIGERNILSWNMLIS 372
           GK +H   IR G+    D +  +L++ YA+C   G + +C KV   + + +++SW  LI+
Sbjct: 288 GKQLHSWAIRSGL---VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344

Query: 373 EYARK-GMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
            Y +   ++ EA+ L  +M T G + P+ F+ +S+  ACGN+   ++G Q+ G   K   
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             +  V +S+I M+ K      A   FE + +K++V +N+ + G  +N N  +A  L  +
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           +    L +   TF + +   +N+G + KG+ +H +++  G+  +  +  AL  MY+KCG 
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           + TA RVF+ M  RNV+SW++MI  +  HG        F QM++ G+KPNEVT++ IL A
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584

Query: 610 CSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSH G V EG  +FN+M     ++P ++HYACMVDLL R+G +  AF+ I++MPF A+  
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVL 644

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           +W   L  CR+H   ++ K   +++     N+   Y  LSNIYA  G W+E  ++R  M+
Sbjct: 645 VWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMK 704

Query: 729 VTGLKKVPGYSTI 741
              L K  G S I
Sbjct: 705 ERNLVKEGGCSWI 717



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 318/631 (50%), Gaps = 30/631 (4%)

Query: 3   LFRSCTNLR--KLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT---FK 56
           L +SC   R  +L +L HA L+   +  D      LI  Y++ G    +  VF+T   F 
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D   W+ ++ CY  N    ++I ++ + +      +++ Y +V+RACS+   +G G  
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 117 VHGRIIKCG-FDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
             G ++K G F+ D  +  S++  +  GE    ++A KVFDKM+  +VV+W+ +I     
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGE-NSFENAYKVFDKMSELNVVTWTLMITRCMQ 246

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                E ++ F  MV  G E D  T+ S+  AC EL +L   + +H   +R  +  D  +
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--V 304

Query: 234 GNSFIVMYSKC---GDLLSAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKML 289
             S + MY+KC   G +    + F ++E     SWTA+I+ Y ++     +A+  F +M+
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 290 -EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
            +   EPN  T  +   +C  L   R GK V  Q  ++G+      +  ++I  + +  +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN-SSVANSVISMFVKSDR 423

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           M + ++   ++ E+N++S+N  +    R    ++A +LL ++    L   +F+ AS LS 
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483

Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
             NVGS++ G QIH  V+K+    ++ V ++LI MYSKCG  + A  +F  ++ ++V+ W
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI- 526
            SMI GF ++G ++  +  F+QM    ++ +EVT++  + ACS++G + +G W H   + 
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG-WRHFNSMY 602

Query: 527 -SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
             + ++  +     + D+  + G L  A    ++M  + +V+ W   +    +H      
Sbjct: 603 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662

Query: 585 ASLFKQMLDSGIKPNE----VTFMNILWACS 611
               +++L+  + PNE    +   NI +AC+
Sbjct: 663 KLAARKILE--LDPNEPAAYIQLSNI-YACA 690



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 276/554 (49%), Gaps = 14/554 (2%)

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           +I  + +  D+   +     M R+G+ P D VT  SL ++C      R  + +H  ++  
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE---KRCTTSWTAMISCYNRSGWFQKAL 282
            I+ D  L NS I +YSK GD   AE  F  +    KR   SW+AM++CY  +G    A+
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
           + FV+ LE+   PN      V+ +C+   ++  G+     +++ G       +G +LI+ 
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 343 YAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
           + +         KV   + E N+++W ++I+   + G  +EA+   + M   G   D F+
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKC---GFKNLAYLLFER 458
           ++S  SAC  + +L LG Q+H   I+    D+ V+ SL+DMY+KC   G  +    +F+R
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD-VECSLVDMYAKCSADGSVDDCRKVFDR 330

Query: 459 IQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLE 516
           ++  SV+ W ++I G+ +N N + EAINLF +M     +E +  TF +A +AC N+    
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK V  +    G+  +  +  ++  M+ K   ++ AQR F+S+SE+N+VS++  +D   
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            +     A  L  ++ +  +  +  TF ++L   ++ GS+ +G+   + +   G+  +  
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK-RIDVMKTIEKELSV 695
               ++ + S+ G I+ A ++ + M    N   W +++ G   H   I V++T  + +  
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569

Query: 696 -TGTNDNGYYTLLS 708
               N+  Y  +LS
Sbjct: 570 GVKPNEVTYVAILS 583


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 200/604 (33%), Positives = 318/604 (52%), Gaps = 74/604 (12%)

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           Y   G L + R+VFD M  ++V  W+ +++ Y    D  E + +F  MV +G        
Sbjct: 6   YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-------- 57

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
                                        I+G    S             A   F K+  
Sbjct: 58  -----------------------------IEGKRSES-------------ASELFDKLCD 75

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           R   SW +MIS Y  +G  ++ L  + +M+ +  + +L T+I+VL  CA  G L  GK+V
Sbjct: 76  RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAV 135

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
           H   I+       ++    L++ Y++CG +    +V   +GERN++SW  +I+ Y R G 
Sbjct: 136 HSLAIKSSFERRINF-SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGW 194

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSS 438
           S  A+ LL QM+  G+  D  ++ S L AC   GSL  G  +H ++   +   + FV ++
Sbjct: 195 SDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNA 254

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+DMY+KCG    A  +F  +  K ++ WN+M+                       L+ D
Sbjct: 255 LMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GELKPD 293

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
             T    + AC+++  LE+GK +H  ++  G   D ++  AL D+Y KCG L  A+ +FD
Sbjct: 294 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 353

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            +  +++VSW+ MI  YGMHG  N+A + F +M D+GI+P+EV+F++IL+ACSHSG +E+
Sbjct: 354 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 413

Query: 619 G-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           G +F++     F +EP L+HYACMVDLLSR+G++  A+K I ++P   + +IWGALL GC
Sbjct: 414 GWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC 473

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           RI+  I++ + + + +      + GYY LL+NIYAE   W+E  ++R  +   GL+K PG
Sbjct: 474 RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPG 533

Query: 738 YSTI 741
            S I
Sbjct: 534 CSWI 537



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 207/443 (46%), Gaps = 27/443 (6%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++E   E     S+  +FD   + D   W  +I  Y+ N   E  + +Y +M+     + 
Sbjct: 53  MVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 112

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
                SVL  C+  G L  G+ VH   IK  F++      ++L  Y + G LD A +VF+
Sbjct: 113 LATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 172

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KM  R+VVSW+S+IA Y  +      + +   M +EGV+ D V + S+  AC    SL  
Sbjct: 173 KMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN 232

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + +H ++    +  +  + N+ + MY+KCG +  A   F  +  +   SW  M+     
Sbjct: 233 GKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---- 288

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
                          E+K  P+  T+  +L +CA L  L  GK +H  I+R G   +  +
Sbjct: 289 ---------------ELK--PDSRTMACILPACASLSALERGKEIHGYILRNGYSSD-RH 330

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  AL++ Y +CG +     +   I  ++++SW ++I+ Y   G   EA+    +M+  G
Sbjct: 331 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 390

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQ---IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
           + PD  S  S L AC + G L+ G +   I  +   I+ K E   + ++D+ S+ G  + 
Sbjct: 391 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHY-ACMVDLLSRTGNLSK 449

Query: 452 AYLLFERIQ-QKSVVMWNSMICG 473
           AY   E +       +W +++CG
Sbjct: 450 AYKFIETLPIAPDATIWGALLCG 472



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 177/394 (44%), Gaps = 74/394 (18%)

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR---------------------- 376
           L+ FYA CG + E  +V   + ++N+  WN ++SEYA+                      
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 377 -----------------------------KGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
                                         G+++  L +  QM   G+  D  ++ S L 
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
            C   G+L LG  +H   IK   +      ++L+DMYSKCG  + A  +FE++ +++VV 
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           W SMI G+ ++G S  AI L  QM    +++D V   + + AC+  G L+ GK VH  + 
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
           +  +  ++++  AL DMYAKCG ++ A  VF +M  ++++SW+ M+      G+L     
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------GEL----- 290

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
                     KP+  T   IL AC+   ++E GK     +   G   D      +VDL  
Sbjct: 291 ----------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 340

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           + G + G  +++  M    +   W  ++ G  +H
Sbjct: 341 KCG-VLGLARLLFDMIPSKDLVSWTVMIAGYGMH 373



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 21/285 (7%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           S  L++ Y++ G L  +  VF+   E +   W  +I  Y  + + + +I+L  +M +E  
Sbjct: 151 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGV 210

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
            +      S+L AC+  G L +G+ VH  I       +  +  +++  Y + G ++ A  
Sbjct: 211 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANS 270

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VF  M  +D++SW++++                       ++PD  TM  +  AC  L +
Sbjct: 271 VFSTMVVKDIISWNTMVGE---------------------LKPDSRTMACILPACASLSA 309

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   + IHG++LR     D  + N+ + +Y KCG L  A   F  I  +   SWT MI+ 
Sbjct: 310 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 369

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           Y   G+  +A+ +F +M +   EP+ ++ I++L +C+  G L +G
Sbjct: 370 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 414



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 52/114 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S + L +   +H ++L  G   D   +  L++ Y + G L  +RL+FD     D 
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 360

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + +  E+I  +++M           + S+L ACS  G L  G
Sbjct: 361 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 414


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 216/663 (32%), Positives = 335/663 (50%), Gaps = 44/663 (6%)

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR------------------- 159
            R++K GFD        +L +    G L  AR +FD+M  R                   
Sbjct: 23  ARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQL 82

Query: 160 ---------------DVVSWSSIIASYFD--NADVSEGLKMFHSMVREGVEPDFVTM--- 199
                          D V+W+ +I ++     A  S+ + +F  M+REGV PD VT+   
Sbjct: 83  SAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATV 142

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           L+L  A G   +     S+H   L+  +   +  + N+ +  Y K G L +A R F ++ 
Sbjct: 143 LNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMP 202

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
            R + ++ AM+   ++ G   +AL+ F  M          T  TVL    G+G L  G+ 
Sbjct: 203 HRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQ 262

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           VH  + R        ++  +L++FY++C  + E +K+ H + ER+ +S+N++I+ YA   
Sbjct: 263 VHGLVARAT--SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNR 320

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQS 437
            +   L L  +MQ+      +   AS LS  G+V  + +G QIH  ++ +    E  V +
Sbjct: 321 CASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGN 380

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           +LIDMYSKCG  + A   F     K+ V W +MI G  QNG   EA+ LF  M    L  
Sbjct: 381 ALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSP 440

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D  TF + I+A SN+  +  G+ +H  LI  G    ++  +AL DMY KCG L  A + F
Sbjct: 441 DRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTF 500

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D M ERN +SW+A+I  Y  +GQ  +A  +F+ ML  G KP+ VTF+++L ACSH+G  E
Sbjct: 501 DEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAE 560

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           E   YF  M   +G+ P  +HY+C++D L R G  +   +M+  MPF  +  IW ++L+ 
Sbjct: 561 ECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHS 620

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR H   D+ +   ++L   G+ D   Y +LSNI+A+ G W++   V+ IM   GL+K  
Sbjct: 621 CRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKET 680

Query: 737 GYS 739
           GYS
Sbjct: 681 GYS 683



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 246/526 (46%), Gaps = 9/526 (1%)

Query: 13  LTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +  LH   L  GL H +      L+++Y + G L ++R VF      DS  +  ++    
Sbjct: 158 IASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCS 217

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
                 E++ L+  M R+    + F + +VL   + +GDL  G +VHG + +     +  
Sbjct: 218 KEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVF 276

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  S+L  Y +  CLD+ +K+F +M  RD VS++ +IA Y  N   S  L++F  M    
Sbjct: 277 VNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLS 336

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            +   +   SL    G +  +   + IH  ++   +  +  +GN+ I MYSKCG L +A+
Sbjct: 337 FDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAK 396

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F+    +   SWTAMI+   ++G  ++AL+ F  M      P+  T  + + + + L 
Sbjct: 397 TNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLA 456

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +  G+ +H  +IR G      + G AL++ Y +CG + E  +    + ERN +SWN +I
Sbjct: 457 MIGLGRQLHSYLIRSGHMSSV-FSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVI 515

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL---QIHGHVIKI 428
           S YA  G +K A+++   M  +G  PDS +  S LSAC + G  +  +   ++  +   I
Sbjct: 516 SAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGI 575

Query: 429 DCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               E   S +ID   + G F  +  +L E   +   ++W+S++     +GN  +   + 
Sbjct: 576 SPWKEHY-SCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQ-DLARVA 633

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
            +   +    D   ++      +  G+ E    V   +   G+RK+
Sbjct: 634 AEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKE 679


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 211/656 (32%), Positives = 354/656 (53%), Gaps = 15/656 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + S+L++C    D   G+ VH R+I+   + D V+  S++  Y + G    A  VF+ M 
Sbjct: 65  FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124

Query: 158 ---SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
               RDVVSWS+++A Y +N    + +K+F   +  G+ P+     ++  AC     +  
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184

Query: 215 ARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISCY 272
            R   G +++    + D  +G S I M+ K  +   +A + F K+ +    +WT MI+  
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            + G+ ++A+  F+ M+    E +  TL +V  +CA L  L  GK +H   IR G+    
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL---V 301

Query: 333 DYLGPALIEFYAEC---GKMSECEKVIHAIGERNILSWNMLISEYARK-GMSKEALELLV 388
           D +  +L++ YA+C   G + +C KV   + + +++SW  LI+ Y +   ++ EA+ L  
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361

Query: 389 QMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKC 446
           +M T G + P+ F+ +S+  ACGN+   ++G Q+ G   K     +  V +S+I M+ K 
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
                A   FE + +K++V +N+ + G  +N N  +A  L  ++    L +   TF + +
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
              +N+G + KG+ +H +++  G+  +  +  AL  MY+KCG + TA RVF+ M  RNV+
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW++MI  +  HG        F QM++ G+KPNEVT++ IL ACSH G V EG  +FN+M
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
                ++P ++HYACMVDLL R+G +  AF+ I++MPF A+  +W   L  CR+H   ++
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            K   +++     N+   Y  LSNIYA  G W+E  ++R  M+   L K  G S I
Sbjct: 662 GKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 318/631 (50%), Gaps = 30/631 (4%)

Query: 3   LFRSCTNLR--KLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT---FK 56
           L +SC   R  +L +L HA L+   +  D      LI  Y++ G    +  VF+T   F 
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D   W+ ++ CY  N    ++I ++ + +      +++ Y +V+RACS+   +G G  
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 117 VHGRIIKCG-FDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
             G ++K G F+ D  +  S++  +  GE    ++A KVFDKM+  +VV+W+ +I     
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGE-NSFENAYKVFDKMSELNVVTWTLMITRCMQ 246

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                E ++ F  MV  G E D  T+ S+  AC EL +L   + +H   +R  +  D  +
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--V 304

Query: 234 GNSFIVMYSKC---GDLLSAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKML 289
             S + MY+KC   G +    + F ++E     SWTA+I+ Y ++     +A+  F +M+
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 290 -EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
            +   EPN  T  +   +C  L   R GK V  Q  ++G+      +  ++I  + +  +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN-SSVANSVISMFVKSDR 423

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           M + ++   ++ E+N++S+N  +    R    ++A +LL ++    L   +F+ AS LS 
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483

Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
             NVGS++ G QIH  V+K+    ++ V ++LI MYSKCG  + A  +F  ++ ++V+ W
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI- 526
            SMI GF ++G ++  +  F+QM    ++ +EVT++  + ACS++G + +G W H   + 
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG-WRHFNSMY 602

Query: 527 -SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
             + ++  +     + D+  + G L  A    ++M  + +V+ W   +    +H      
Sbjct: 603 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662

Query: 585 ASLFKQMLDSGIKPNE----VTFMNILWACS 611
               +++L+  + PNE    +   NI +AC+
Sbjct: 663 KLAARKILE--LDPNEPAAYIQLSNI-YACA 690



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 276/554 (49%), Gaps = 14/554 (2%)

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           +I  + +  D+   +     M R+G+ P D VT  SL ++C      R  + +H  ++  
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE---KRCTTSWTAMISCYNRSGWFQKAL 282
            I+ D  L NS I +YSK GD   AE  F  +    KR   SW+AM++CY  +G    A+
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
           + FV+ LE+   PN      V+ +C+   ++  G+     +++ G       +G +LI+ 
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 343 YAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
           + +         KV   + E N+++W ++I+   + G  +EA+   + M   G   D F+
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKC---GFKNLAYLLFER 458
           ++S  SAC  + +L LG Q+H   I+    D+ V+ SL+DMY+KC   G  +    +F+R
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD-VECSLVDMYAKCSADGSVDDCRKVFDR 330

Query: 459 IQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLE 516
           ++  SV+ W ++I G+ +N N + EAINLF +M     +E +  TF +A +AC N+    
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK V  +    G+  +  +  ++  M+ K   ++ AQR F+S+SE+N+VS++  +D   
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            +     A  L  ++ +  +  +  TF ++L   ++ GS+ +G+   + +   G+  +  
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK-RIDVMKTIEKELSV 695
               ++ + S+ G I+ A ++ + M    N   W +++ G   H   I V++T  + +  
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569

Query: 696 -TGTNDNGYYTLLS 708
               N+  Y  +LS
Sbjct: 570 GVKPNEVTYVAILS 583


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 207/655 (31%), Positives = 342/655 (52%), Gaps = 11/655 (1%)

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
           A IS   Y    +  +S+  L    + H +II  GF  D  + T +     + G +  AR
Sbjct: 16  ALISKNTYLDFFKRSTSISHLA---QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYAR 72

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGEL 209
            +F  +   DV  ++ ++  +  N      L +F H      ++P+  T      A    
Sbjct: 73  DIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGF 132

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
              R  R IHG  +      +  LG++ + MY K   +  A + F ++ ++ T  W  MI
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192

Query: 270 SCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           S Y ++  + ++++ F  ++ E     +  TL+ +L + A L  LR G  +H    + G 
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
              +DY+    I  Y++CGK+     +     + +I+++N +I  Y   G ++ +L L  
Sbjct: 253 Y-SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCG 447
           ++   G    S ++ S +   G+   L L   IHG+ +K +      V ++L  +YSK  
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  LF+   +KS+  WN+MI G+ QNG + +AI+LF +M  +    + VT    + 
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           AC+ +G L  GKWVH  + S      IY+ TAL  MYAKCG +  A+R+FD M+++N V+
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+ MI  YG+HGQ  +A ++F +ML+SGI P  VTF+ +L+ACSH+G V+EG   FN+M 
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             +G EP ++HYACMVD+L R+G ++ A + I +M      S+W  LL  CRIHK  ++ 
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +T+ ++L     ++ GY+ LLSNI++ + N+ +   VR   +   L K PGY+ I
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/619 (25%), Positives = 310/619 (50%), Gaps = 12/619 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +  F+  T++  L + HA +++ G   D    T+L +  +++G++  +R +F + + PD 
Sbjct: 24  LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
           F++ VL++ +  N     S+ ++  + +      N   Y   + A S   D  +G  +HG
Sbjct: 84  FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG 143

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + +  G D + ++ ++I+  Y +F  ++DARKVFD+M  +D + W+++I+ Y  N    E
Sbjct: 144 QAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 203

Query: 180 GLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            +++F  ++ E     D  T+L +  A  EL  LR    IH    +        +   FI
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +YSKCG +      F +  K    ++ AMI  Y  +G  + +L  F +++         
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL++++     L  +    ++H   ++      +  +  AL   Y++  ++    K+   
Sbjct: 324 TLVSLVPVSGHLMLIY---AIHGYCLKSNF-LSHASVSTALTTVYSKLNEIESARKLFDE 379

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             E+++ SWN +IS Y + G++++A+ L  +MQ     P+  ++   LSAC  +G+L LG
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439

Query: 419 LQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +H  V   D +   +V ++LI MY+KCG    A  LF+ + +K+ V WN+MI G+  +
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
           G   EA+N+F++M  + +    VTFL  + ACS+ G +++G  + + +I  YG    +  
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
              + D+  + G LQ A +  ++MS E     W  ++    +H   N A ++ +++ +  
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE-- 617

Query: 596 IKPNEVTFMNILWACSHSG 614
           + P+ V + ++L +  HS 
Sbjct: 618 LDPDNVGY-HVLLSNIHSA 635


>gi|302815759|ref|XP_002989560.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
 gi|300142738|gb|EFJ09436.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
          Length = 744

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 222/712 (31%), Positives = 365/712 (51%), Gaps = 20/712 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  NL +  +LHA  +   L  +   +  LI  Y +  SL  +  +F   +  D   W  
Sbjct: 22  SSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHSLAEAERLFHGLERKDPVTWNT 81

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  +  N     ++ LY +M         F+   VL ACS+LGDL  G  V   I    
Sbjct: 82  MIGAFTHNGQPRLAVDLYARMGSGDRNSVTFL--GVLEACSALGDLDLGRTVDSSIAGSE 139

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           +  D V+ T+++  YG    ++DAR+ FD M  ++VVSW++++ SY  N      L+   
Sbjct: 140 WRDDVVVGTAVVGMYGRCRSIEDARQRFDSMPVKNVVSWNALVTSYARNGHPCGALRALR 199

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M  +G + + VT L + E   +L SL   RSIH  V R        L N+ I MY K  
Sbjct: 200 EMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRVTRGGDGGGTRLENALISMYGKLE 259

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVL 304
           +L  + R F  +  +   SWTAMI+ Y ++G  + ALE + +M LE +  P+ +T   VL
Sbjct: 260 NLEESLRVFEAMANKDVVSWTAMITAYAQNGRERLALELYRRMELEKRVRPDRVTYAAVL 319

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIHAIGE 361
           G+C+GLG L  GK ++ ++       ++D    L  +L+  + +C  + + ++V  +I  
Sbjct: 320 GACSGLGDLSTGKEIYARVCSS----DFDVDAALKTSLVGLHGKCHCLEDAKEVFESISS 375

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQ 420
           R+ L++N +++ YA+ G   +AL L  QM    G+ P   S A +L AC  +  L  G  
Sbjct: 376 RDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKS 435

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +HG +     K DE + ++L+  Y + G    A  +FE++  K V  +++MI  + QNG 
Sbjct: 436 LHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGC 495

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
              A+ ++ +M    ++ DEV F++ + ACS+    E    VH +++  G   D  + TA
Sbjct: 496 EGRAMTIYAEMDQQGIKPDEVAFISVLSACSSNLATE----VHTEILHAGFEADGALGTA 551

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L  MYAK G+L+ ++R+F +M  R+ VSW+AMI  +  HG   +A  LF+ M   GI   
Sbjct: 552 LVCMYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFARHG--CEAKLLFQGMALDGIDAK 609

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
             T  ++L + S SG V+  + +F AM+  FG  P  +HY+C+VDLL+RSG +  A +++
Sbjct: 610 GSTLTSMLVSYSQSG-VDAARGFFMAMQGDFGTCPAAEHYSCLVDLLARSGRVGEAKELV 668

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
            SMP   +   W  LL  C+ H  ++  K+  + +    ++  G Y + S +
Sbjct: 669 DSMPLEPDFVPWMTLLGACKTHGDLEQAKSAARGVLEVDSHSPGAYLVSSTL 720



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 303/584 (51%), Gaps = 11/584 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S + AC+S G+L  G ++H   I    D++ ++  S++  YG+   L +A ++F  +  +
Sbjct: 15  SAISACASSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHSLAEAERLFHGLERK 74

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           D V+W+++I ++  N      + ++  M     + + VT L + EAC  L  L   R++ 
Sbjct: 75  DPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEACSALGDLDLGRTVD 132

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             +   + + D  +G + + MY +C  +  A + F  +  +   SW A+++ Y R+G   
Sbjct: 133 SSIAGSEWRDDVVVGTAVVGMYGRCRSIEDARQRFDSMPVKNVVSWNALVTSYARNGHPC 192

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
            AL +  +M     + N +T + V+     LG L  G+S+H ++ R G       L  AL
Sbjct: 193 GALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRVTRGGD-GGGTRLENAL 251

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPD 398
           I  Y +   + E  +V  A+  ++++SW  +I+ YA+ G  + ALEL  +M+    + PD
Sbjct: 252 ISMYGKLENLEESLRVFEAMANKDVVSWTAMITAYAQNGRERLALELYRRMELEKRVRPD 311

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFE 457
             + A+ L AC  +G L  G +I+  V   D   D  +++SL+ ++ KC     A  +FE
Sbjct: 312 RVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLHGKCHCLEDAKEVFE 371

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLE 516
            I  +  + +N+M+  + QNG+  +A+NL+ QM  L  +E  + +F  A+ AC+ +  L 
Sbjct: 372 SISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLV 431

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK +H ++   G++ D  + T L   Y + G L+ A+R+F+ M  ++V S+SAMI  Y 
Sbjct: 432 TGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYS 491

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            +G    A +++ +M   GIKP+EV F+++L ACS + + E      +A    G E D  
Sbjct: 492 QNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSSNLATEVHTEILHA----GFEADGA 547

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
               +V + ++SG++E + ++  +M    + S W A+++    H
Sbjct: 548 LGTALVCMYAKSGNLEESRRIFGAMKSRDSVS-WTAMISAFARH 590



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/573 (27%), Positives = 269/573 (46%), Gaps = 47/573 (8%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P   T++S   AC    +L   R +H   + R++  +  + NS I MY KC  L  AER 
Sbjct: 8   PHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHSLAEAERL 67

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +E++   +W  MI  +  +G  + A++ + +M     + N +T + VL +C+ LG L
Sbjct: 68  FHGLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEACSALGDL 125

Query: 314 REGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             G++V   I     G E+     +G A++  Y  C  + +  +   ++  +N++SWN L
Sbjct: 126 DLGRTVDSSIA----GSEWRDDVVVGTAVVGMYGRCRSIEDARQRFDSMPVKNVVSWNAL 181

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           ++ YAR G    AL  L +M   G   +  +    +     +GSL LG  IH  V +   
Sbjct: 182 VTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRVTRGGD 241

Query: 431 KDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
                ++++LI MY K      +  +FE +  K VV W +MI  + QNG    A+ L+ +
Sbjct: 242 GGGTRLENALISMYGKLENLEESLRVFEAMANKDVVSWTAMITAYAQNGRERLALELYRR 301

Query: 490 MYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           M L   +  D VT+   + ACS +G L  GK ++ ++ S     D  + T+L  ++ KC 
Sbjct: 302 MELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLHGKCH 361

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNIL 607
            L+ A+ VF+S+S R+ ++++AM+  Y  +G  +DA +L++QM+D  G++P + +F   L
Sbjct: 362 CLEDAKEVFESISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVAL 421

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP----F 663
            AC+    +  GK     +++ G++ D      +V      G +E A ++   MP    F
Sbjct: 422 MACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVF 481

Query: 664 PANGSIWGALLNGCR-----IHKRIDVMKTIEKE------LSVTGTN------------- 699
             +  I     NGC      I+  +D       E      LS   +N             
Sbjct: 482 SYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSSNLATEVHTEILHAG 541

Query: 700 ---DNGYYTLLSNIYAEEGNWDE----FGKVRS 725
              D    T L  +YA+ GN +E    FG ++S
Sbjct: 542 FEADGALGTALVCMYAKSGNLEESRRIFGAMKS 574


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 200/647 (30%), Positives = 331/647 (51%), Gaps = 11/647 (1%)

Query: 105 CSSLGDLGSGEKVHGRIIKCG-----FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           CS L     G  VH  ++          ++ ++   ++  YG     D AR VFD M  R
Sbjct: 50  CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           + VSW+++IA++  N+  ++ + +F SM+R G  PD   + S   AC EL  L   R +H
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              ++        + N+ + MYSK G +      F +I  +   SW ++I+   + G   
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229

Query: 280 KALESFVKML-EVKEEPNLITLITVLGSCAG-LGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            AL  F +M+ E    PN     +V  +C+  +  L  G+ +H   ++  +     Y G 
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLD-RNSYAGC 288

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           +L + YA C K+    KV + I   +++SWN LI+ ++  G+  EA+ L  +M+   L P
Sbjct: 289 SLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKP 348

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           D  +V + L AC    +L+ G  IH +++K+    D  V +SLI MY++C     A  +F
Sbjct: 349 DGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVF 408

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
                + VV WNS++    Q+ +  +   LF  ++ +   +D ++    + A + +G  E
Sbjct: 409 HETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFE 468

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCY 575
             K VH      G+  D  +  AL D YAKCG L  A ++F+ M + R+V SWS++I  Y
Sbjct: 469 MAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 528

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPD 634
              G   +A  LF +M + G+KPN VTF+ +L ACS  G V+EG +Y++ M   +G+ P 
Sbjct: 529 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPT 588

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
            +H +C++DLL+R+G +  A K +  MPF  +  +W  LL   R H  +++ K   + + 
Sbjct: 589 KEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVL 648

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               + +  Y LL NIYA  GNW+EF +++  M  +G++K PG S I
Sbjct: 649 NIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWI 695



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/589 (27%), Positives = 295/589 (50%), Gaps = 15/589 (2%)

Query: 7   CTNLRKLTR---LHAHLLVTG-----LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           C+ LR   +   +H HLL +      L  +   S  LI  Y    +  S+R+VFD   + 
Sbjct: 50  CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   WA +I  +  N+   +++ L+  M+R       F   S +RAC+ LGDLG G +VH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            + IK       ++Q +++  Y + G + D   +F+++  +D+ SW SIIA         
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229

Query: 179 EGLKMFHSMVREGV-EPDFVTMLSLAEACGELC-SLRPARSIHGHVLRRKIKIDGPLGNS 236
           + L +F  M+ EG+  P+     S+  AC  +  SL     IHG  ++ K+  +   G S
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
              MY++C  L SA + F +IE     SW ++I+ ++  G   +A+  F +M     +P+
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPD 349

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            IT++ +L +C G   LR+G+S+H  +++ G+G +   +  +LI  Y  C        V 
Sbjct: 350 GITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDV-MVCNSLISMYTRCLDFPSAMDVF 408

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           H   +R++++WN +++   +    ++  +L   + +     D  S+ + LSA   +G  +
Sbjct: 409 HETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFE 468

Query: 417 LGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGF 474
           +  Q+H +  K+    D  + ++LID Y+KCG  + A  LFE +   + V  W+S+I G+
Sbjct: 469 MAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 528

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKD 533
            Q G + EA++LF +M    ++ + VTF+  + ACS +G +++G + +  +   YG+   
Sbjct: 529 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPT 588

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
               + + D+ A+ G L  A +  D M  E +++ W+ ++     H  +
Sbjct: 589 KEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDV 637



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 246/524 (46%), Gaps = 13/524 (2%)

Query: 165 SSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEA---CGELCSLRPARSIHG 220
           S  I  ++ +  +S  L+ F S+       PD ++  + A     C  L S    R +H 
Sbjct: 5   SGTILQFYHSGRLSAALRAFESLPFSPASAPDPLSAAAYAALVAACSRLRSFPQGRLVHR 64

Query: 221 HVLRRK-----IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           H+L        +  +  L N  I MY +C    SA   F  +  R   SW A+I+ + ++
Sbjct: 65  HLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQN 124

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
                A+  F  ML +   P+   L + + +CA LG L  G+ VH Q I+   G     +
Sbjct: 125 SRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHL-IV 183

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL+  Y++ G + +   +   I ++++ SW  +I+  A++G   +AL +  +M   G+
Sbjct: 184 QNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGM 243

Query: 396 M-PDSFSVASSLSACGNV-GSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLA 452
             P+ F   S   AC  V  SL+ G QIHG  +K    ++ +   SL DMY++C   + A
Sbjct: 244 HHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSA 303

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F RI+   +V WNS+I  F  +G   EA+ LF +M  + L+ D +T +  + AC   
Sbjct: 304 MKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGC 363

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L +G+ +H  L+  G+  D+ +  +L  MY +C D  +A  VF   ++R+VV+W++++
Sbjct: 364 DALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSIL 423

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
                H  + D   LF+ +  S    + ++  N+L A +  G  E  K         G+ 
Sbjct: 424 TACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLV 483

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            D      ++D  ++ G ++ A K+   M    +   W +L+ G
Sbjct: 484 SDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVG 527



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 237/480 (49%), Gaps = 14/480 (2%)

Query: 5   RSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           R+C  L  L    ++HA  + +           L+  Y++ GS+     +F+  ++ D F
Sbjct: 154 RACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLF 213

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSS-LGDLGSGEKVHG 119
            W  +I          +++ ++ +MI E     N F + SV RACS  +  L  GE++HG
Sbjct: 214 SWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHG 273

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K   D++     S+   Y     LD A KVF ++ S D+VSW+S+I ++  +  +SE
Sbjct: 274 LCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSE 333

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  M    ++PD +T+++L  AC    +LR  RSIH ++++  +  D  + NS I 
Sbjct: 334 AMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLIS 393

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY++C D  SA   F +   R   +W ++++   +    +   + F  +       + I+
Sbjct: 394 MYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRIS 453

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L  VL + A LG+    K VH    + G+  +   L  ALI+ YA+CG + +  K+   +
Sbjct: 454 LNNVLSASAELGYFEMAKQVHAYAFKVGLVSD-AILSNALIDTYAKCGSLDDANKLFEIM 512

Query: 360 GE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           G  R++ SW+ LI  YA+ G +KEAL+L  +M+  G+ P+  +    L AC  VG +  G
Sbjct: 513 GTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG 572

Query: 419 LQIHGHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
              +  +      +  K+    S +ID+ ++ G  + A    +++  +  ++MWN+++  
Sbjct: 573 CYYYSIMEPEYGIVPTKEHC--SCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAA 630


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 209/683 (30%), Positives = 361/683 (52%), Gaps = 51/683 (7%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVF--DKM 156
           S L+ C +L +L   +++H  ++K G F+ + +I   +    G    L+ A   F  D+ 
Sbjct: 27  SSLQTCKTLIEL---KQLHCNMLKKGVFNINKLIAACV--QMGTHESLNYALNAFKEDEG 81

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           T   + + +++I  Y  +    E + ++ H ++  G+ PD  T   L  AC ++ +    
Sbjct: 82  TKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEG 141

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             +HG V++  +  D  + NS I  Y+ CG +    + F ++ +R   SWT++I+ Y+  
Sbjct: 142 VQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVV 201

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
              ++A+  F +M+EV  EPN +T++  + +CA L  L  GK V C ++ +        +
Sbjct: 202 NMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKV-CNLMTELGVKSNTLV 260

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++ Y +CG M    ++     ++N++ +N ++S Y + G++ E L +L +M   G 
Sbjct: 261 VNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ 320

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYL 454
            PD  ++ S+++AC  +G L +G   H +V +   +  + + +++IDMY KCG +  A  
Sbjct: 321 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACK 380

Query: 455 LFERIQQKSVVMWNSMICGFYQNG--------------------NSL-----------EA 483
           +F+ +  K+VV WNS+I G  ++G                    N++           EA
Sbjct: 381 VFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEA 440

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID----TA 539
           I+L  +M    ++ D VT +    AC  +G L+  KW++    +Y  + DI+ID    TA
Sbjct: 441 IDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIY----TYIEKNDIHIDMQLGTA 496

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L DM+++CGD   A RVF++M +R+V +W+A I    + G    A  LF +ML   +K +
Sbjct: 497 LVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKAD 556

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
           +  F+ +L A SH G V++G+  F AM +I GV P + HY CMVDLL R+G +E AF ++
Sbjct: 557 DFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLM 616

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
            SMP   N  IWG+ L  CR HK ++     +++++       G + LLSNIYA  G W+
Sbjct: 617 KSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWN 676

Query: 719 EFGKVRSIMEVTGLKKVPGYSTI 741
           +  +VR  M+  G +KV G S+I
Sbjct: 677 DVARVRLQMKEKGFQKVAGSSSI 699



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 184/655 (28%), Positives = 308/655 (47%), Gaps = 82/655 (12%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--- 60
            ++C  L +L +LH ++L  G+        +LI +  +MG+  S     + FKE +    
Sbjct: 29  LQTCKTLIELKQLHCNMLKKGVF----NINKLIAACVQMGTHESLNYALNAFKEDEGTKC 84

Query: 61  --FMWAVLIKCYMWNNFFEESILLYHKMIREQATI-SNFIYPSVLRACSSLGDLGSGEKV 117
             +    LI+ Y  +   +E+I +Y  MI     +  NF +P +L ACS +     G +V
Sbjct: 85  SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K G  KD  +  S++  Y   G +D  RKVFD+M  R+VVSW+S+I  Y      
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E + +F  MV  GVEP+ VTM+    AC +L  L   + +   +    +K +  + N+ 
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCGD+ +    F +   +    +  ++S Y + G   + L    +ML+  + P+ 
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDK 324

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T+++ + +CA LG L  GKS H  + R G+    D +  A+I+ Y +CGK     KV  
Sbjct: 325 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGL-ERLDNISNAIIDMYMKCGKREAACKVFD 383

Query: 358 AIGERNILSWNMLISEYARKG-------------------------------MSKEALEL 386
           ++  + +++WN LI+   R G                               M +EA++L
Sbjct: 384 SMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 443

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
           L +MQ  G+  D  ++    SACG +G+L L   I+ ++ K D   D  + ++L+DM+S+
Sbjct: 444 LREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSR 503

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           CG    A  +FE ++++ V  W + I      GN+  AI LF +M    ++ D+  F+  
Sbjct: 504 CGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVAL 563

Query: 506 IQACSNIGQLEKGK---WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           + A S+ G +++G+   W   K+  +GV   I                            
Sbjct: 564 LTAFSHGGYVDQGRQLFWAMEKI--HGVSPQI---------------------------- 593

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
              V +  M+D  G  G L +A  L K M    IKPN+V + + L AC    +VE
Sbjct: 594 ---VHYGCMVDLLGRAGLLEEAFDLMKSM---PIKPNDVIWGSFLAACRKHKNVE 642


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 224/764 (29%), Positives = 401/764 (52%), Gaps = 31/764 (4%)

Query: 3   LFRSCTNLRKL---TRLHAHLLV--TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           L ++C  LR L    RLHAH+L     LH     ++ LI  +A+ G+L  +  + D F  
Sbjct: 49  LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFAS 108

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
              +    +I+ +M +   ++++ L+ +M   +   +     +++ ACS LG+L +G ++
Sbjct: 109 --VYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRI 163

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM---TSRDVVSWSSIIASYFDN 174
           H +I    F+++ V+  +++  Y + G L DA++ FD++   + RDVV+W+++I+++  N
Sbjct: 164 HSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRN 223

Query: 175 ADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGE--LCSLRPARSIHGHVLRRKIKIDG 231
               E L++F  M R+G  P + VT +S+ ++C E  L SL   R+IHG ++   I+ + 
Sbjct: 224 GSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREA 283

Query: 232 PLGNSFIVMYSKCGDLLSAERTFV-KIEKRCTTSW---TAMISCYNRSGWFQKALESFVK 287
            +  + +  Y K G L  A   F+ K ++  +TS    +AMIS   ++GW Q++L  F  
Sbjct: 284 FVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFA 343

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M     +P+ +TL++VL +C+ L        V  Q +        + LG  L+  YA   
Sbjct: 344 MNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSN 403

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            +        AI   +++SWN + + Y +   S+EAL L  +M   G+ P   +  ++L+
Sbjct: 404 DLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALT 463

Query: 408 ACGNV---GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQ--Q 461
           AC       +  +G +I   + +   + D  V ++ ++MY+KCG    A  +FERI   +
Sbjct: 464 ACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPAR 523

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL-EMDEVTFLTAIQACSNIGQLEKGKW 520
           +  + WNSM+  +  +G   EA  LF  M    L + ++VTF+  + A ++   + +G+ 
Sbjct: 524 RDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGRE 583

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD--SMSERNVVSWSAMIDCYGMH 578
           +H +++S G   D  I  AL +MYAKCG L  AQ +FD  S ++ +V++W+++I  Y  +
Sbjct: 584 IHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQY 643

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQH 637
           GQ   A  LF  M   G++PN VTF++ L AC+H G +E+G    + M    G+ P  +H
Sbjct: 644 GQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKH 703

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           ++C+VDLL R G ++ A K++      A+   W ALL+ C+  K ++  +   + +    
Sbjct: 704 FSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLD 762

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 Y +L+++YA  G W+E   +R  M   G++  PG S +
Sbjct: 763 PEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAV 806



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 165/590 (27%), Positives = 299/590 (50%), Gaps = 26/590 (4%)

Query: 85  KMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD--KDDVIQTSILCTYGE 142
           ++I +Q   +   Y  +L+AC  L  L  G+++H  I+    D      + + ++  + +
Sbjct: 33  RIIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAK 92

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G L +A  + D+  S  V S +++I ++ ++    + +++F  M    V P+   +++L
Sbjct: 93  CGNLAEAEALADRFAS--VYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIAL 147

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI---EK 259
             AC  L +L   R IH  +  R  + +  LGN+ I MYSKCG L+ A++ F ++    K
Sbjct: 148 VNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASK 207

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSC--AGLGWLREG 316
           R   +W AMIS + R+G  ++AL+ F  M  +    PN +T ++VL SC  AGL  L + 
Sbjct: 208 RDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDV 267

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER----NILSWNMLIS 372
           +++H +I+  G+  E  ++  AL++ Y + G + +  +V    G+     ++++ + +IS
Sbjct: 268 RAIHGRIVGAGIEREA-FVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMIS 326

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG--NVGSLQLGLQIHGHVIKIDC 430
              + G  +E+L L   M   G  P   ++ S L+AC    VGS    +      +    
Sbjct: 327 ACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT 386

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           +D  + ++L+  Y++      A   F+ IQ   VV WN+M   + Q+  S EA+ LF +M
Sbjct: 387 RDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERM 446

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEK---GKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            L  +     TF+TA+ AC+          GK +   L   G+  D  +  A  +MYAKC
Sbjct: 447 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 506

Query: 548 GDLQTAQRVFDSMS--ERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LDSGIKPNEVTFM 604
           G L  A+ VF+ +S   R+ ++W++M+  YG HG   +A  LF+ M  +  +KPN+VTF+
Sbjct: 507 GSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFV 566

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            +L A +   S+ +G+     +   G E D      ++++ ++ G ++ A
Sbjct: 567 AVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDA 616


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 185/537 (34%), Positives = 309/537 (57%), Gaps = 9/537 (1%)

Query: 211 SLRPARSIHGHVLRRKI----KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
           ++R    IH H+++ ++    K+   L  S  ++     D   A   F +I++  + ++ 
Sbjct: 36  TIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDY--AVSIFRQIDEPDSPAYN 93

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
            MI  +       +A+  F +M E   +P+  T   +L  C+ L  L EG+ +H  I++ 
Sbjct: 94  IMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKC 153

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G G  + ++   LI  YA CG++    +V   + ERN+ +WN + + Y + G  +E ++L
Sbjct: 154 GFG-SHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKL 212

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
             +M    +  D  ++ S L+ACG +  L+LG  I+ +V +   K +  + +SL+DMY+K
Sbjct: 213 FHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAK 272

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           CG  + A  LF+++ ++ VV W++MI G+ Q     EA++LFH+M    ++ +E+T ++ 
Sbjct: 273 CGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSI 332

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + +C+ +G LE GKWVH  +    ++  + + TAL D YAKCG ++++  VF  M  +NV
Sbjct: 333 LSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNV 392

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW+ +I     +GQ   A   F  ML+  ++PN+VTF+ +L ACSH+G V+EG+  F +
Sbjct: 393 LSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVS 452

Query: 626 M-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M R FG+EP ++HY CMVD+L R+G IE AF+ I +MP   N  IW  LL  C++HK ++
Sbjct: 453 MSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVE 512

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +   K+L +     +G Y LLSNIYA  G W++  KVR  M+  G+KK PG S I
Sbjct: 513 IGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLI 569



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 175/605 (28%), Positives = 304/605 (50%), Gaps = 32/605 (5%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEM--GSLRSSRLVFDTFKEPDS 60
           +   C  +R L  +HAHL+ T L   P  +  L+ES A +   S+  +  +F    EPDS
Sbjct: 30  ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDS 89

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             + ++I+ +       E+ILL+ +M         F +P +L+ CS L  L  GE++H  
Sbjct: 90  PAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHAL 149

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+KCGF     ++ +++  Y   G ++ AR+VFD+M+ R+V +W+S+ A Y  + +  E 
Sbjct: 150 IMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEV 209

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +K+FH M+   +  D VT++S+  ACG L  L     I+ +V  + +K +  L  S + M
Sbjct: 210 VKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDM 269

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A R F ++++R   +W+AMIS Y+++   ++AL+ F +M +   +PN IT+
Sbjct: 270 YAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITM 329

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L SCA LG L  GK VH  I +K M      LG AL++FYA+CG +    +V   + 
Sbjct: 330 VSILSSCAVLGALETGKWVHFFIKKKRMKLTVT-LGTALMDFYAKCGSVESSIEVFGKMP 388

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +N+LSW +LI   A  G  K+ALE    M    + P+  +    LSAC + G +  G  
Sbjct: 389 VKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRD 448

Query: 421 IHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGF 474
           +   + +   I+ + E     ++D+  + G    A+   + +  Q + V+W +++  C  
Sbjct: 449 LFVSMSRDFGIEPRIEHY-GCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKV 507

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
           ++N    E  +L   + L      +   L+ I A  ++G+ E    V  ++   G++K  
Sbjct: 508 HKNVEIGEE-SLKQLIILEPTHSGDYILLSNIYA--SVGRWEDALKVRGEMKEKGIKKT- 563

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
                       C  ++    + +  +E NV S S  I         N    + KQ+  +
Sbjct: 564 ----------PGCSLIELDGVIHEFFAEDNVHSQSEEI--------YNAIEDMMKQIKSA 605

Query: 595 GIKPN 599
           G  PN
Sbjct: 606 GYVPN 610


>gi|255565109|ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537254|gb|EEF38886.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 555

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 186/545 (34%), Positives = 320/545 (58%), Gaps = 5/545 (0%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+R      +  +P VL+AC+   ++  G ++HG + K GFD D  +  ++L  YG  G 
Sbjct: 1   MVRNGIRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGY 60

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAE 204
           L DA+KVFD+M  RDVVSW++++ ++  N    + L +F+ M +R G  P+ VT++S+  
Sbjct: 61  LSDAKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLP 120

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
            C  L     A  IH +V++  +     L N+ + +Y KCG+L S+ R F ++ +R   S
Sbjct: 121 VCAALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVS 180

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W A+I+        + ALE+F  M+  + +PN +T+ ++L     L     GK +H   +
Sbjct: 181 WNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSL 240

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
           R G+  +  ++  +LI+ YA+ G  ++   V H + E+N++SWN +++ +A+      A+
Sbjct: 241 RFGIESDV-FISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAI 299

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
           EL+ QMQT G +P+  +  ++L AC  +G L+ G +IH    ++ C  D+FV ++L DMY
Sbjct: 300 ELVRQMQTDGAIPNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMY 359

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           +KCGF NLA  +F  I  +  V +N +I G+ Q  NS E+++LF +M L  +E D V+++
Sbjct: 360 AKCGFLNLARNVF-NISLRDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYM 418

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
             I AC+++  L++G+ +H  ++   +   I+I  +L D Y KCG +  A ++F  +SE+
Sbjct: 419 GVIAACASLVALKQGEEIHALVVRKNLHMHIFIANSLLDFYTKCGKIDLACKIFYRISEK 478

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           +  SW+ +I   GM G+L  A +LF+ M + G++ + V+++ +L ACSH G VE+GK Y 
Sbjct: 479 DAASWNTIILGVGMLGELEAAINLFEAMREDGVEYDSVSYIAVLSACSHGGLVEKGKKY- 537

Query: 624 NAMRI 628
           +A RI
Sbjct: 538 SACRI 542



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 162/514 (31%), Positives = 270/514 (52%), Gaps = 6/514 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           N++K   +H  +   G  +D      L+  Y   G L  ++ VFD   E D   W  L+ 
Sbjct: 25  NVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGYLSDAKKVFDEMLERDVVSWNTLLG 84

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
            +  N F+ +++ L+++M        N +   SVL  C++L D     ++H  ++K G D
Sbjct: 85  AFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEIHCYVVKIGLD 144

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
               +  +++  YG+ G L  +R+VFD+M  R+ VSW++II S        + L+ F  M
Sbjct: 145 SQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLAYMEHNKDALEAFRLM 204

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           + E V+P+ VT+ S+     EL      + IHG  LR  I+ D  + NS I MY+K G  
Sbjct: 205 INEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRFGIESDVFISNSLIDMYAKSGHS 264

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A   F  + ++   SW AM++ + ++ +   A+E   +M      PN +T    L +C
Sbjct: 265 TQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQTDGAIPNPVTFTNALPAC 324

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           A +G+LR GK +H +  R  MG  +D ++  AL + YA+CG ++    V + I  R+ +S
Sbjct: 325 ARMGFLRPGKEIHARAFR--MGCYFDQFVSNALTDMYAKCGFLNLARNVFN-ISLRDEVS 381

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           +N+LI  Y++   S E+L L ++M   G+  D  S    ++AC ++ +L+ G +IH  V+
Sbjct: 382 YNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQGEEIHALVV 441

Query: 427 KIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           + +     F+ +SL+D Y+KCG  +LA  +F RI +K    WN++I G    G    AIN
Sbjct: 442 RKNLHMHIFIANSLLDFYTKCGKIDLACKIFYRISEKDAASWNTIILGVGMLGELEAAIN 501

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           LF  M  + +E D V+++  + ACS+ G +EKGK
Sbjct: 502 LFEAMREDGVEYDSVSYIAVLSACSHGGLVEKGK 535



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 148/283 (52%), Gaps = 3/283 (1%)

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           G+ PD  +    L AC +  ++Q G++IHG V K+    D FV ++L+  Y   G+ + A
Sbjct: 5   GIRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGYLSDA 64

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSN 511
             +F+ + ++ VV WN+++  F  NG  L+A++LF++M L      + VT ++ +  C+ 
Sbjct: 65  KKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAA 124

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +        +H  ++  G+   + +  AL D+Y KCG+L++++RVFD M ERN VSW+A+
Sbjct: 125 LEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAI 184

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I          DA   F+ M++  +KPN VT  +IL         + GK        FG+
Sbjct: 185 ITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRFGI 244

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           E D+     ++D+ ++SG    A  + H M    N   W A++
Sbjct: 245 ESDVFISNSLIDMYAKSGHSTQASVVFHLMT-EKNVVSWNAMV 286


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 193/594 (32%), Positives = 310/594 (52%), Gaps = 75/594 (12%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK- 259
           S+ + C  L S    + +H  +    + +DG LG   +  Y+ CGDL    R F  +EK 
Sbjct: 104 SVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKK 163

Query: 260 --------------------------------------------------RCTTSWTAMI 269
                                                             R   SW +MI
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           S Y  +G  ++ L  + +M+ +  + +L T+I+VL  CA  G L  GK+VH   I+    
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
              ++    L++ Y++CG +    +V   +GERN++SW  +I+ Y R G S  A++LL Q
Sbjct: 284 RRINF-SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQ 342

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGF 448
           M+  G+  D  ++ S L AC   GSL  G  +H ++   + +   FV ++L+DMY+KCG 
Sbjct: 343 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGS 402

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  +F  +  K ++ WN+MI                       L+ D  T    + A
Sbjct: 403 MEAANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTMACVLPA 441

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+++  LE+GK +H  ++  G   D ++  AL D+Y KCG L  A+ +FD +  +++VSW
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 501

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMR 627
           + MI  YGMHG  N+A + F +M D+GI+P+EV+F++IL+ACSHSG +E+G +F++    
Sbjct: 502 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 561

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            F +EP L+HYACMVDLLSR+G++  A++ + ++P   + +IWGALL GCR +  I++ +
Sbjct: 562 DFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAE 621

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + + +      + GYY LL+NIYAE   W+E  ++R  +   GL+K PG S I
Sbjct: 622 KVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 274/584 (46%), Gaps = 89/584 (15%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C  L+  T   ++H+ +    +  D     +L+  YA  G L+  R VFDT ++ + ++W
Sbjct: 109 CAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLW 168

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             ++  Y     F+ESI L+  M+ +                           + G+  +
Sbjct: 169 NFMVSEYAKIGDFKESICLFKIMVEKG--------------------------IEGKRPE 202

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F+                        +FDK+  RDV+SW+S+I+ Y  N     GL +
Sbjct: 203 SAFE------------------------LFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           +  M+  G++ D  T++S+   C    +L   +++H   ++   +      N+ + MYSK
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 298

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CGDL  A R F K+ +R   SWT+MI+ Y R G    A++   +M +   + +++ + ++
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSI 358

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CA  G L  GK VH  I    M     ++  AL++ YA+CG M     V   +  ++
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNL-FVCNALMDMYAKCGSMEAANSVFSTMVVKD 417

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           I+SWN +I E                     L PDS ++A  L AC ++ +L+ G +IHG
Sbjct: 418 IISWNTMIGE---------------------LKPDSRTMACVLPACASLSALERGKEIHG 456

Query: 424 HVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           ++++     D  V ++L+D+Y KCG   LA LLF+ I  K +V W  MI G+  +G   E
Sbjct: 457 YILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNE 516

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL-- 540
           AI  F++M    +E DEV+F++ + ACS+ G LE+G W       Y ++ D  I+  L  
Sbjct: 517 AIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG-W----RFFYIMKNDFNIEPKLEH 571

Query: 541 ----TDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI-DCYGMH 578
                D+ ++ G+L  A    +++    +   W A++  C   H
Sbjct: 572 YACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYH 615



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 121/294 (41%), Gaps = 66/294 (22%)

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL----EMDEVTFLTAIQACSNIG 513
           R     V  +N+ I  F Q G+      L + M L C+    E++  T+ + +Q C+ + 
Sbjct: 60  RTIDHQVTDYNAKILHFCQLGD------LENAMELICMCQKSELETKTYGSVLQLCAGLK 113

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN--------- 564
               GK VH  + S  V  D  +   L   YA CGDL+  +RVFD+M ++N         
Sbjct: 114 SFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVS 173

Query: 565 ------------------------------------------VVSWSAMIDCYGMHGQLN 582
                                                     V+SW++MI  Y  +G   
Sbjct: 174 EYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTE 233

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
               ++KQM+  GI  +  T +++L  C++SG++  GK   +       E  +     ++
Sbjct: 234 RGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG----CRIHKRIDVMKTIEKE 692
           D+ S+ GD++GA ++   M    N   W +++ G     R    I +++ +EKE
Sbjct: 294 DMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKE 346



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 52/114 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S + L +   +H ++L  G   D   +  L++ Y + G L  +RL+FD     D 
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + +  E+I  +++M           + S+L ACS  G L  G
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 222/741 (29%), Positives = 361/741 (48%), Gaps = 101/741 (13%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV----- 152
           +   LR+C + G L     +HGR++  G      +Q ++L  Y   G L DAR++     
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66

Query: 153 ---------------------------FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
                                      F +M +RDV SW+++++ YF +      L+ F 
Sbjct: 67  AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126

Query: 186 SMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           SM R G   P+  T     ++CG L     A  + G V +   + D  +  + + M+ +C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186

Query: 245 GDLLSAERTFVKIEK-------------------------------RCTTSWTAMISCYN 273
           G +  A R FV+I++                               R   SW  M+S  +
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +SG  ++AL+  V M       +  T  + L +CA L  LR GK +H Q+IR    P  D
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL--PCID 304

Query: 334 -YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            Y+  AL+E YA+CG   E + V +++ +RN ++W +LI+ + + G   E++EL  QM+ 
Sbjct: 305 PYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRA 364

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNL 451
             +  D F++A+ +S C +   L LG Q+H   +K    +   V +SLI MY+KC     
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM--------------YL----- 492
           A  +F  + +K +V W SMI    Q GN  +A   F  M              Y+     
Sbjct: 425 AESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAE 484

Query: 493 -NCLEM------------DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
            + L M            D VT++T  + C+++G  + G  +  + +  G+  D  +  A
Sbjct: 485 EDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANA 544

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           +  MY+KCG +  A++VFD ++ +++VSW+AMI  Y  HG    A  +F  +L  G KP+
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 604

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            ++++ +L  CSHSG V+EGK YF+ M R+  + P L+H++CMVDLL R+G +  A  +I
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLI 664

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
             MP      +WGALL+ C+IH   ++ +   K +    + D+G Y L++ IYA+ G  D
Sbjct: 665 DEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 724

Query: 719 EFGKVRSIMEVTGLKKVPGYS 739
           +  ++R +M   G+KK PGYS
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYS 745



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 166/704 (23%), Positives = 303/704 (43%), Gaps = 84/704 (11%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           + SC  L    RL   LL    H +      ++  Y ++G L  +  +F      D   W
Sbjct: 49  YLSCGALPDARRL---LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASW 105

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRII 122
             L+  Y  +  +  S+  +  M R   +  N F +   +++C +LG+     ++ G + 
Sbjct: 106 NTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQ 165

Query: 123 KCGFDKDDVI-------------------------------QTSILCTYGEFGCLDDARK 151
           K G   D  +                               + S+L  Y +   +D A +
Sbjct: 166 KFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALE 225

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +FD M  RDVVSW+ ++++   +  V E L M   M  +GV  D  T  S   AC  L S
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           LR  + +H  V+R    ID  + ++ + +Y+KCG    A+  F  +  R   +WT +I+ 
Sbjct: 286 LRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAG 345

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           + + G F +++E F +M       +   L T++  C     L  G+ +H   ++ G   +
Sbjct: 346 FLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ-IQ 404

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +  +LI  YA+C  +   E +   + E++I+SW  +I+ +++ G   +A E    M 
Sbjct: 405 AVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMS 464

Query: 392 -----TWGLM---------------------------PDSFSVASSLSACGNVGSLQLGL 419
                TW  M                           PD  +  +    C ++G+ +LG 
Sbjct: 465 TKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGD 524

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QI G  +K+    D  V +++I MYSKCG    A  +F+ +  K +V WN+MI G+ Q+G
Sbjct: 525 QIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-------KWVHHKLISYGVR 531
              +AI +F  +     + D ++++  +  CS+ G +++G       K VH+  IS G+ 
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHN--ISPGLE 642

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQ 590
                 + + D+  + G L  A+ + D M  +     W A++    +HG  N+ A L  +
Sbjct: 643 H----FSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGN-NELAELAAK 697

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
            +     P+  ++M +    + +G  ++       MR  G++ +
Sbjct: 698 HVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 741


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 182/566 (32%), Positives = 323/566 (57%), Gaps = 8/566 (1%)

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L+++  M   G+  D   + SL  AC +L +L   R +H H++    + D PL  + +
Sbjct: 13  QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG L  A+R F  +E +   +W+++I+ Y R+G  + A+  + +M+    EPN++
Sbjct: 73  QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVV 132

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T    LG CA +  L +G+++H +I+   + P+ D L  +L+  Y +C +M E  KV   
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKV-PQDDVLQDSLLNMYLKCDEMVEARKVFEG 191

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  RN+ S+  +IS Y + G   EALEL  +M +   + P++++ A+ L A   +G+L+ 
Sbjct: 192 MKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 251

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G ++H H+       +  VQ++L+ MY KCG    A  +F+ +  ++V+ W SMI  + Q
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           +GN  EA+NLF +M +   E   V+F +A+ AC+ +G L++G+ +HH+++   +     +
Sbjct: 312 HGNPQEALNLFKRMDV---EPSGVSFSSALNACALLGALDEGREIHHRVVEANL-ASPQM 367

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
           +T+L  MYA+CG L  A+RVF+ M  R+  S +AMI  +  HG+   A  ++++M   GI
Sbjct: 368 ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGI 427

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAF 655
             + +TF+++L ACSH+  V + + +  ++ +  GV P ++HY CMVD+L RSG +  A 
Sbjct: 428 PADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAE 487

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           +++ +MP+ A+   W  LL+GC+ H  +D  +   +++      +   Y  LSN+YA   
Sbjct: 488 ELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAK 547

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +D+  +VR  ME  G+ +    S I
Sbjct: 548 RFDDARRVRKEMEERGVTRPVAVSYI 573



 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 171/558 (30%), Positives = 286/558 (51%), Gaps = 42/558 (7%)

Query: 78  ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
           +++ L+ +M         FI  S++ AC+ L  L  G ++H  +I  GF  D  ++T++L
Sbjct: 13  QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
             Y + G LDDA++VF+ M  +D+ +WSSIIA+Y         + ++  M+ EGVEP+ V
Sbjct: 73  QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVV 132

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T       C  +  L   R+IH  +L  K+  D  L +S + MY KC +++ A + F  +
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREG 316
           + R   S+TAMIS Y ++G   +ALE F +M +V+  EPN  T  T+LG+  GLG L +G
Sbjct: 193 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 252

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           + VH  +  +G       +  AL+  Y +CG   E  KV  ++  RN++SW  +I+ YA+
Sbjct: 253 RKVHRHLASRGFDTNV-VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ 436
            G  +EAL L  +M    + P   S +S+L+AC  +G+L  G +IH  V++ +     ++
Sbjct: 312 HGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQME 368

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           +SL+ MY++CG  + A  +F R++ +     N+MI  F Q+G   +A+ ++ +M    + 
Sbjct: 369 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIP 428

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD-LQTAQR 555
            D +TF++ + ACS+                             T + A C D LQ+   
Sbjct: 429 ADGITFVSVLVACSH-----------------------------TSLVADCRDFLQSL-- 457

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           V D      V  +  M+D  G  G+L DA  L + M     + + V +M +L  C   G 
Sbjct: 458 VMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETM---PYQADAVAWMTLLSGCKRHGD 514

Query: 616 VEEGKFYFNAMRIFGVEP 633
           ++ G+    A ++F + P
Sbjct: 515 LDRGE--RAARKVFELAP 530



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 165/575 (28%), Positives = 284/575 (49%), Gaps = 46/575 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +CT L+ L    RLH HL++TG   D P  T L++ YA+ GSL  ++ VF+  +  D
Sbjct: 36  LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 95

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W+ +I  Y      E +++LY +MI E    +   +   L  C+S+  L  G  +H 
Sbjct: 96  LFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 155

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI+     +DDV+Q S+L  Y +   + +ARKVF+ M +R+V S++++I++Y    + +E
Sbjct: 156 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 215

Query: 180 GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L++F  M + E +EP+  T  ++  A   L +L   R +H H+  R    +  + N+ +
Sbjct: 216 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 275

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG  + A + F  +  R   SWT+MI+ Y + G  Q+AL  F +M     EP+ +
Sbjct: 276 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGV 332

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMG-PEYDYLGPALIEFYAECGKMSECEKVIH 357
           +  + L +CA LG L EG+ +H +++   +  P+ +    +L+  YA CG + +  +V +
Sbjct: 333 SFSSALNACALLGALDEGREIHHRVVEANLASPQME---TSLLSMYARCGSLDDARRVFN 389

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  R+  S N +I+ + + G  K+AL +  +M+  G+  D  +  S L AC +      
Sbjct: 390 RMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTS---- 445

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
                   +  DC+D F+QS ++D     G   L            V  +  M+    ++
Sbjct: 446 --------LVADCRD-FLQSLVMDH----GVVPL------------VEHYLCMVDVLGRS 480

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI-YI 536
           G   +A  L   M     + D V ++T +  C   G L++G+    K+      + + Y+
Sbjct: 481 GRLGDAEELVETMP---YQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYV 537

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
              L++MYA       A+RV   M ER V    A+
Sbjct: 538 --FLSNMYAAAKRFDDARRVRKEMEERGVTRPVAV 570



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 233/434 (53%), Gaps = 18/434 (4%)

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI+   R G   +ALE + +M E     +   + +++ +C  L  L EG+ +H  +I  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
              +   L  AL++ YA+CG + + ++V   +  +++ +W+ +I+ YAR G  + A+ L 
Sbjct: 61  FRTDIP-LETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLY 119

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKC 446
            +M   G+ P+  + A +L  C +V  L  G  IH  ++     +D+ +Q SL++MY KC
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM-YLNCLEMDEVTFLTA 505
                A  +FE ++ ++V  + +MI  + Q G   EA+ LF +M  +  +E +  TF T 
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + A   +G LEKG+ VH  L S G   ++ +  AL  MY KCG    A++VFDSM+ RNV
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNV 299

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW++MI  Y  HG   +A +LFK+M    ++P+ V+F + L AC+  G+++EG+   + 
Sbjct: 300 ISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHR 356

Query: 626 MRIFGVEPDL---QHYACMVDLLSRSGDIEGAFKMIHSM----PFPANGSIWGALLNGCR 678
           +    VE +L   Q    ++ + +R G ++ A ++ + M     F  N  I     +G R
Sbjct: 357 V----VEANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHG-R 411

Query: 679 IHKRIDVMKTIEKE 692
             + + + + +E+E
Sbjct: 412 KKQALRIYRKMEQE 425


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 219/712 (30%), Positives = 359/712 (50%), Gaps = 74/712 (10%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFD 154
           F+  ++L A  S G L        R++       +VI  +++   Y + G L DA ++F 
Sbjct: 40  FLQNTLLHAYLSCGALSDAR----RLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFG 95

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLR 213
           +M +RDV SW+++++ YF +      L+ F SM R G   P+  T+    ++CG L    
Sbjct: 96  RMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHS 155

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK-------------- 259
            A  +   V +   + D  +  + + M+ +CG +  A R FV+I++              
Sbjct: 156 LALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYV 215

Query: 260 -----------------RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
                            R   SW  M+S  ++SG  ++AL+  V M       +  T  +
Sbjct: 216 KTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTS 275

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE 361
            L +CA L  LR GK +H Q+IR    P  D Y+  AL+E YA+ G   E + V +++ +
Sbjct: 276 SLTACARLSSLRWGKQLHAQVIRNL--PHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 333

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           RN ++W +LIS + + G   E++EL  QM+   +  D F++A+ +S C +   L LG Q+
Sbjct: 334 RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393

Query: 422 HGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H   +K    +   V +SLI MY+KC     A  +F  + +K +V W SMI  + Q GN 
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 453

Query: 481 LEAINLFHQM--------------YL------NCLEM------------DEVTFLTAIQA 508
            +A   F  M              Y+      + L M            D VT++T  + 
Sbjct: 454 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 513

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+++G  + G  +  + +  G+  D  +  A+  MY+KCG +  A++VFD ++ +++VSW
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSW 573

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-R 627
           +AMI  Y  HG    A  +F  +L  G KP+ ++++ +L  CSHSG V+EGKFYF+ M R
Sbjct: 574 NAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR 633

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
              + P L+H++CMVDLL R+G +  A  +I  MP      +WGALL+ C+IH   ++ +
Sbjct: 634 AHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAE 693

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
              K +    + D+G Y L++ IYA+ G  D+  ++R +M   G+KK PGYS
Sbjct: 694 LAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 157/698 (22%), Positives = 297/698 (42%), Gaps = 72/698 (10%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           + SC  L    RL   LL+   H +      ++  YA++G L  +  +F      D   W
Sbjct: 49  YLSCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASW 105

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRII 122
             L+  Y  +  +  S+  +  M R   +  N F     +++C +LG      ++   + 
Sbjct: 106 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 165

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K     D  +  +++  +   G +D A ++F ++    +   +S++A Y     V   L+
Sbjct: 166 KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALE 225

Query: 183 MFHSM--------------------VRE-----------GVEPDFVTMLSLAEACGELCS 211
           +F SM                    VRE           GV  D  T  S   AC  L S
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           LR  + +H  V+R    ID  + ++ + +Y+K G    A+  F  +  R   +WT +IS 
Sbjct: 286 LRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 345

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           + + G F +++E F +M       +   L T++  C     L  G+ +H   ++ G   +
Sbjct: 346 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ-IQ 404

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +  +LI  YA+C  +   E +   + E++I+SW  +I+ Y++ G   +A E    M 
Sbjct: 405 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 464

Query: 392 -----TWGLM---------------------------PDSFSVASSLSACGNVGSLQLGL 419
                TW  M                           PD  +  +    C ++G+ +LG 
Sbjct: 465 EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 524

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QI G  +K+    D  V +++I MYSKCG    A  +F+ +  K +V WN+MI G+ Q+G
Sbjct: 525 QIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYID 537
              +AI +F  +     + D ++++  +  CS+ G +++GK+    +  ++ +   +   
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF 644

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
           + + D+  + G L  A+ + D M  +     W A++    +HG  N+ A L  + +    
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGN-NELAELAAKHVFELD 703

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
            P+  ++M +    + +G  ++       MR  G++ +
Sbjct: 704 SPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 741



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR-VFDS 559
            F  A+++C   G L   + +H +L++ G+   +++   L   Y  CG L  A+R +   
Sbjct: 6   AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           ++  NV++ + M++ Y   G+L+DA  LF +M
Sbjct: 66  IAHPNVITHNVMLNGYAKLGRLSDAVELFGRM 97


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 219/712 (30%), Positives = 359/712 (50%), Gaps = 74/712 (10%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFD 154
           F+  ++L A  S G L        R++       +VI  +++   Y + G L DA ++F 
Sbjct: 60  FLQNTLLHAYLSCGALSDAR----RLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFG 115

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLR 213
           +M +RDV SW+++++ YF +      L+ F SM R G   P+  T+    ++CG L    
Sbjct: 116 RMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHS 175

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK-------------- 259
            A  +   V +   + D  +  + + M+ +CG +  A R FV+I++              
Sbjct: 176 LALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYV 235

Query: 260 -----------------RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
                            R   SW  M+S  ++SG  ++AL+  V M       +  T  +
Sbjct: 236 KTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTS 295

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE 361
            L +CA L  LR GK +H Q+IR    P  D Y+  AL+E YA+ G   E + V +++ +
Sbjct: 296 SLTACARLSSLRWGKQLHAQVIRNL--PHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 353

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           RN ++W +LIS + + G   E++EL  QM+   +  D F++A+ +S C +   L LG Q+
Sbjct: 354 RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 413

Query: 422 HGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H   +K    +   V +SLI MY+KC     A  +F  + +K +V W SMI  + Q GN 
Sbjct: 414 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 473

Query: 481 LEAINLFHQM--------------YL------NCLEM------------DEVTFLTAIQA 508
            +A   F  M              Y+      + L M            D VT++T  + 
Sbjct: 474 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 533

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+++G  + G  +  + +  G+  D  +  A+  MY+KCG +  A++VFD ++ +++VSW
Sbjct: 534 CADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSW 593

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-R 627
           +AMI  Y  HG    A  +F  +L  G KP+ ++++ +L  CSHSG V+EGKFYF+ M R
Sbjct: 594 NAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR 653

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
              + P L+H++CMVDLL R+G +  A  +I  MP      +WGALL+ C+IH   ++ +
Sbjct: 654 AHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAE 713

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
              K +    + D+G Y L++ IYA+ G  D+  ++R +M   G+KK PGYS
Sbjct: 714 LAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 765



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 157/698 (22%), Positives = 297/698 (42%), Gaps = 72/698 (10%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           + SC  L    RL   LL+   H +      ++  YA++G L  +  +F      D   W
Sbjct: 69  YLSCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASW 125

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRII 122
             L+  Y  +  +  S+  +  M R   +  N F     +++C +LG      ++   + 
Sbjct: 126 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 185

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K     D  +  +++  +   G +D A ++F ++    +   +S++A Y     V   L+
Sbjct: 186 KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALE 245

Query: 183 MFHSM--------------------VRE-----------GVEPDFVTMLSLAEACGELCS 211
           +F SM                    VRE           GV  D  T  S   AC  L S
Sbjct: 246 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 305

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           LR  + +H  V+R    ID  + ++ + +Y+K G    A+  F  +  R   +WT +IS 
Sbjct: 306 LRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 365

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           + + G F +++E F +M       +   L T++  C     L  G+ +H   ++ G   +
Sbjct: 366 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ-IQ 424

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +  +LI  YA+C  +   E +   + E++I+SW  +I+ Y++ G   +A E    M 
Sbjct: 425 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 484

Query: 392 -----TWGLM---------------------------PDSFSVASSLSACGNVGSLQLGL 419
                TW  M                           PD  +  +    C ++G+ +LG 
Sbjct: 485 EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 544

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QI G  +K+    D  V +++I MYSKCG    A  +F+ +  K +V WN+MI G+ Q+G
Sbjct: 545 QIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 604

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYID 537
              +AI +F  +     + D ++++  +  CS+ G +++GK+    +  ++ +   +   
Sbjct: 605 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF 664

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
           + + D+  + G L  A+ + D M  +     W A++    +HG  N+ A L  + +    
Sbjct: 665 SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGN-NELAELAAKHVFELD 723

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
            P+  ++M +    + +G  ++       MR  G++ +
Sbjct: 724 SPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 761



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR-VFDS 559
            F  A+++C   G L   + +H +L++ G+   +++   L   Y  CG L  A+R +   
Sbjct: 26  AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           ++  NV++ + M++ Y   G+L+DA  LF +M
Sbjct: 86  IAHPNVITHNVMLNGYAKLGRLSDAVELFGRM 117


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 182/526 (34%), Positives = 306/526 (58%), Gaps = 4/526 (0%)

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HG++++        + N+ I  Y+K   +  A   F ++ +R   SW ++I     +G 
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           + KA+E FV+M    +E +  TL++V+ +C    +   G  VH   +R G+  E   LG 
Sbjct: 66  YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS-LGN 124

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL++ Y+ C       K+   + ++N++SW  +I+ Y R G   +   L  +M   G+ P
Sbjct: 125 ALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRP 184

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
           D F++ S+L A     SL+ G  +HG+ I+   ++   V ++L++MY KCG+   A  +F
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           + + +K  + WN++I G+ ++  + EA  LF++M L  L  + VT    + A +++  LE
Sbjct: 245 DHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLE 303

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +G+ +H   +  G  +D ++  AL DMY KCG L  A+R+FD ++ +N++SW+ MI  YG
Sbjct: 304 RGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYG 363

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDL 635
           MHG+  DA +LF+QM  SGI+P+  +F  IL+ACSHSG  +EG  +FNAMR    +EP L
Sbjct: 364 MHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKL 423

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HYACMVDLL  +G+++ A++ I +MP   + SIW +LL GCRIH+ + + + + + +  
Sbjct: 424 KHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFE 483

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               + GYY LL+NIYAE   W+   K+++ +   GL++  G S I
Sbjct: 484 LEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWI 529



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 258/497 (51%), Gaps = 7/497 (1%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G  VHG ++K GF     +  +++  Y +   ++DA  VFD+M  RD++SW+SII     
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           N    + +++F  M  EG E D  T+LS+  AC +         +HG+ +R  +  +  L
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           GN+ + MYS C D  S  + F  +E++   SWTAMI+ Y R+G F K    F +M     
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            P++  + + L + AG   L+ GKSVH   IR G+  E   +  AL+E Y +CG M E  
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGI-EEVLPVANALMEMYVKCGYMEEAR 241

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +   + +++ +SWN LI  Y+R  ++ EA  L  +M    L P++ ++A  L A  ++ 
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLS 300

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           SL+ G ++H + ++    +D FV ++L+DMY KCG   LA  LF+ +  K+++ W  MI 
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVR 531
           G+  +G   +AI LF QM  + ++ D  +F   + ACS+ G  ++G ++ +     + + 
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE 420

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
             +     + D+    G+L+ A    ++M  E +   W +++    +H  +  A  + + 
Sbjct: 421 PKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEM 480

Query: 591 MLDSGIKPNEVTFMNIL 607
           + +  ++P    +  +L
Sbjct: 481 VFE--LEPENTGYYVLL 495



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 196/398 (49%), Gaps = 2/398 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H +L+  G          LI  YA+   +  + +VFD   + D   W  +I     N  
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           +++++ L+ +M  E   + +    SV+ AC        G  VHG  ++ G   +  +  +
Sbjct: 66  YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y          K+F  M  ++VVSW+++I SY       +   +F  M  EG+ PD
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S  +A     SL+  +S+HG+ +R  I+   P+ N+ + MY KCG +  A   F 
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFD 245

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + K+ T SW  +I  Y+RS    +A   F +ML ++  PN +T+  +L + A L  L  
Sbjct: 246 HVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLER 304

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H   +R+G   E +++  AL++ Y +CG +    ++   +  +N++SW ++I+ Y 
Sbjct: 305 GREMHAYAVRRGY-LEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYG 363

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
             G  ++A+ L  QM+  G+ PD+ S ++ L AC + G
Sbjct: 364 MHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSG 401



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 1/301 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H + + TGL  +      L++ Y+     RS+  +F   ++ +   W  +I  Y     
Sbjct: 107 VHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGH 166

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F++   L+ +M  E      F   S L A +    L  G+ VHG  I+ G ++   +  +
Sbjct: 167 FDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANA 226

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +++AR +FD +T +D +SW+++I  Y  +   +E   +F+ M+ + + P+
Sbjct: 227 LMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPN 285

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VTM  +  A   L SL   R +H + +RR    D  + N+ + MY KCG LL A R F 
Sbjct: 286 AVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFD 345

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  +   SWT MI+ Y   G  + A+  F +M     +P+  +   +L +C+  G   E
Sbjct: 346 MLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDE 405

Query: 316 G 316
           G
Sbjct: 406 G 406



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    +L+    +H + +  G+    P +  L+E Y + G +  +R +FD   + D+  W
Sbjct: 196 FAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISW 255

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             LI  Y  +N   E+  L+++M+  Q   +      +L A +SL  L  G ++H   ++
Sbjct: 256 NTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASLSSLERGREMHAYAVR 314

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G+ +D+ +  +++  Y + G L  AR++FD +T+++++SW+ +IA Y  +    + + +
Sbjct: 315 RGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIAL 374

Query: 184 FHSMVREGVEPDFVTMLSLAEAC 206
           F  M   G++PD  +  ++  AC
Sbjct: 375 FEQMKGSGIQPDAGSFSAILYAC 397



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 4/200 (2%)

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G  VH  L+ YG      +  AL   YAK   ++ A  VFD M +R+++SW+++I     
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG-SVEEGKFYFNAMRIFGVEPDLQ 636
           +G  + A  LF +M   G + +  T ++++ AC  S  S   G  +  ++R  G+  +  
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRT-GLISETS 121

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
               ++D+ S   D     K+  +M    N   W A++         D +  + +E+ + 
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNME-QKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 697 GTNDNGYYTLLSNIYAEEGN 716
           G   +  + + S + A  GN
Sbjct: 181 GIRPD-VFAITSALDAFAGN 199



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 50/109 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S ++L +   +HA+ +  G   D   +  L++ Y + G+L  +R +FD     + 
Sbjct: 293 LPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNL 352

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W ++I  Y  +    ++I L+ +M           + ++L ACS  G
Sbjct: 353 ISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSG 401


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 207/686 (30%), Positives = 344/686 (50%), Gaps = 46/686 (6%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           YP +L   ++  D+ SG  +H RII+ G         ++   Y +  C   ARK+    +
Sbjct: 53  YPKLLLQFTASKDVSSGMAIHARIIRLGLLGLRNRLVNL---YSKCQCFRVARKLVIDSS 109

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSM------------------------------ 187
             D+VSWS++I+ Y  N    E L  ++ M                              
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169

Query: 188 ----------VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
                     +  G+ P+  ++ ++  AC  L        +HG++++     D    N+ 
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY+K G   +A   F +I K    SW A+I+          AL+   KM   +  P++
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            TL + L +CA +G ++ G+ +H  +++  M P+  ++G  LI+ Y++CG + +   V  
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPD-SFVGVGLIDMYSKCGLLQDARMVFD 348

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  ++++ WN +IS Y+  G   EA+ L   M   GL  +  ++++ L +     +   
Sbjct: 349 LMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGF 408

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
             Q+H   IK   + D +V +SL+D Y KC     A  +FE    + +V + SMI  + Q
Sbjct: 409 CEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQ 468

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            G   EA+ ++ +M    ++ D   F +   AC+N+   E+GK +H  ++  G+  D++ 
Sbjct: 469 YGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFA 528

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             +L +MYAKCG +  A  +F+ +S R +VSWSAMI     HG    A  LF QML +GI
Sbjct: 529 GNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGI 588

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            PN +T +++L AC+H+G V E + +F  M ++FG+ P  +HYACMVD+L R G ++ A 
Sbjct: 589 LPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAM 648

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
            ++  MPF A+ ++WGALL   RIHK I++ +   + L       +G + LL+NIYA  G
Sbjct: 649 VLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTG 708

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
            WD   KVR  M+ + +KK PG S I
Sbjct: 709 MWDNVAKVRRSMKNSLVKKEPGMSWI 734



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 165/593 (27%), Positives = 288/593 (48%), Gaps = 52/593 (8%)

Query: 36  IESYAEMGSLRSSR-LVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +  Y++    R +R LV D+  EPD   W+ LI  Y+ N   EE++L Y++M    A  +
Sbjct: 89  VNLYSKCQCFRVARKLVIDS-SEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGN 147

Query: 95  NFIYPSVLR----------------------------------------ACSSLGDLGSG 114
            F + SVL+                                        AC+ L D   G
Sbjct: 148 EFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYG 207

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
            KVHG +IK G+D D     ++L  Y + GC + A  VF ++   D+VSW+++IA    +
Sbjct: 208 MKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLH 267

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
                 LK+   M    V P   T+ S  +AC  +  ++  R +H  +++  ++ D  +G
Sbjct: 268 EKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVG 327

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
              I MYSKCG L  A   F  +  +    W ++IS Y+  G+  +A+  F  M +   E
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECE 353
            N  TL T+L S AG       + VH   I+ G   +YD Y+  +L++ Y +C  + +  
Sbjct: 388 FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGY--QYDGYVANSLLDSYGKCCLLEDAA 445

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV       +++++  +I+ Y++ G+ +EAL++ ++MQ   + PD+F  +S  +AC N+ 
Sbjct: 446 KVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLS 505

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           + + G QIH HV+K     D F  +SL++MY+KCG  + A  +F  I  + +V W++MI 
Sbjct: 506 AYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIG 565

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK---WVHHKLISYG 529
           G  Q+G+  +A+ LF+QM  N +  + +T ++ + AC++ G + + +    +  KL    
Sbjct: 566 GLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGIT 625

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
             ++ Y    + D+  + G L  A  +   M  + +   W A++    +H  +
Sbjct: 626 PTQEHY--ACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNI 676



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 239/462 (51%), Gaps = 8/462 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H +L+  G   DP ++  L++ YA+ G   ++  VF    +PD   W  +I   + + 
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             + ++ L  KM   +   S F   S L+AC+++G +  G ++H  ++K   + D  +  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++  Y + G L DAR VFD M  +DV+ W+SII+ Y +     E + +F +M +EG+E 
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T+ ++ ++     +      +H   ++   + DG + NS +  Y KC  L  A + F
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
                    ++T+MI+ Y++ G  ++AL+ +++M +   +P+     ++  +CA L    
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +GK +H  +++ G+  +  + G +L+  YA+CG + +   + + I  R I+SW+ +I   
Sbjct: 509 QGKQIHVHVLKCGLLSDV-FAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGL 567

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI----DC 430
           A+ G  ++AL+L  QM   G++P+  ++ S LSAC + G +    +  G + K+      
Sbjct: 568 AQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPT 627

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
           ++ +  + ++D+  + G  + A +L + +  Q S  +W +++
Sbjct: 628 QEHY--ACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 161/313 (51%), Gaps = 1/313 (0%)

Query: 6   SCTNLRKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           +   L KL R LH+ L+   +  D      LI+ Y++ G L+ +R+VFD     D  +W 
Sbjct: 300 AAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWN 359

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I  Y    +  E++ L+  M +E    +     ++L++ +     G  E+VH   IK 
Sbjct: 360 SIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKS 419

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G+  D  +  S+L +YG+   L+DA KVF+   + D+V+++S+I +Y       E LKM+
Sbjct: 420 GYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMY 479

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M    ++PD     SL  AC  L +    + IH HVL+  +  D   GNS + MY+KC
Sbjct: 480 LRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKC 539

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G +  A   F +I  R   SW+AMI    + G  +KAL+ F +ML+    PN ITL++VL
Sbjct: 540 GSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVL 599

Query: 305 GSCAGLGWLREGK 317
            +C   G + E +
Sbjct: 600 SACNHAGLVTEAR 612


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 211/645 (32%), Positives = 342/645 (53%), Gaps = 29/645 (4%)

Query: 109 GDLGSGEKVHGRIIKCGF-DKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSS 166
           GDL  G  +H R+++    D+D V+  S+L  Y   G +  AR VFD M   RD+VSW++
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC--GEL-CSLRPARSIHGHVL 223
           + +    N    E L +   M+  G+ P+  T+ ++A AC   EL C +        H  
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVH-- 179

Query: 224 RRKIKI---DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
             K+ +   D  +G++ I M ++ GDL SA + F  + ++    WT +IS Y +    ++
Sbjct: 180 --KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEE 237

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           A+E F+  LE   EP+  T+ +++ +C  LG +R G  +H   +R G   +   +   L+
Sbjct: 238 AVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDA-CVSCGLV 296

Query: 341 EFYAECG---KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV-QMQTWGLM 396
           + YA+      M    KV   + + +++SW  LIS Y + G+ +  + +L  +M    + 
Sbjct: 297 DMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIK 356

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           P+  + +S L AC N+     G Q+H HVIK +      V ++L+ MY++ G    A  +
Sbjct: 357 PNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRV 416

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F ++ ++S      MI    +  ++     L H++    + +   TF + I A +++G L
Sbjct: 417 FNQLYERS------MISCITEGRDA----PLDHRIGRMDMGISSSTFASLISAAASVGML 466

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
            KG+ +H   +  G   D ++  +L  MY++CG L+ A R F+ + +RNV+SW++MI   
Sbjct: 467 TKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGL 526

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             HG    A SLF  M+ +G+KPN+VT++ +L ACSH G V EGK YF +M R  G+ P 
Sbjct: 527 AKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPR 586

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           ++HYACMVDLL+RSG ++ A + I+ MP  A+  +W  LL  CR H  I+V +   K + 
Sbjct: 587 MEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVI 646

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
                D   Y LLSN+YA+ G WDE  ++RS M    L K  G S
Sbjct: 647 ELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLS 691



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 167/589 (28%), Positives = 281/589 (47%), Gaps = 32/589 (5%)

Query: 9   NLRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PDSFMWAVL 66
           +LR    LH  LL   L   D   +  L+  Y+  G++ S+R VFD  +   D   W  +
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS-----LGDLGSGEKVHGRI 121
             C   N    ES+LL  +M+      + +   +V  AC       L        VH   
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVH--- 179

Query: 122 IKCGF-DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            K G    D  + ++++      G L  ARKVFD +  + VV W+ +I+ Y       E 
Sbjct: 180 -KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEA 238

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +++F   + +G EPD  TM S+  AC EL S+R    +H   LR     D  +    + M
Sbjct: 239 VEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDM 298

Query: 241 YSKCG---DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ-KALESFVKMLEVKEEPN 296
           Y+K      +  A + F ++ K    SWTA+IS Y +SG  + K +  F +ML    +PN
Sbjct: 299 YAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPN 358

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            IT  ++L +CA +     G+ VH  +I+      +  +G AL+  YAE G M E  +V 
Sbjct: 359 HITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHT-VGNALVSMYAESGCMEEARRVF 417

Query: 357 HAIGERNILSWNMLISEYARKGMSKEA-LELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
           + + ER+++S    I+E       ++A L+  +     G+   +F  AS +SA  +VG L
Sbjct: 418 NQLYERSMIS---CITE------GRDAPLDHRIGRMDMGISSSTF--ASLISAAASVGML 466

Query: 416 QLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             G Q+H   +K     D FV +SL+ MYS+CG+   A   F  ++ ++V+ W SMI G 
Sbjct: 467 TKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGL 526

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKD 533
            ++G +  A++LFH M L  ++ ++VT++  + ACS++G + +GK +       +G+   
Sbjct: 527 AKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPR 586

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
           +     + D+ A+ G ++ A    + M  + + + W  ++     H  +
Sbjct: 587 MEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNI 635



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/543 (23%), Positives = 254/543 (46%), Gaps = 50/543 (9%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    + LI+  A  G L S+R VFD   E    +W +LI  Y+     EE++ ++   +
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG--- 144
            +      +   S++ AC+ LG +  G ++H   ++ GF  D  +   ++  Y +     
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG--LKMFHSMVREGVEPDFVTMLSL 202
            +D A KVF++M   DV+SW+++I+ Y  +  V E   + +F  M+ E ++P+ +T  S+
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSG-VQENKVMVLFGEMLNESIKPNHITYSSI 365

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            +AC  +      R +H HV++        +GN+ + MY++ G +  A R F ++ +R  
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER-- 423

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
               +MISC          L+  +  +++    +  T  +++ + A +G L +G+ +H  
Sbjct: 424 ----SMISCITEG--RDAPLDHRIGRMDMGISSS--TFASLISAAASVGMLTKGQQLHAM 475

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            ++ G G +  ++  +L+  Y+ CG + +  +  + + +RN++SW  +IS  A+ G ++ 
Sbjct: 476 TLKAGFGSDR-FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAER 534

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           AL L   M   G+ P+  +  + LSAC +VG ++ G              E+ +S   D 
Sbjct: 535 ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREG-------------KEYFRSMQRD- 580

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
                     + L  R++      +  M+    ++G   EA+   ++M    L+ D + +
Sbjct: 581 ----------HGLIPRMEH-----YACMVDLLARSGLVKEALEFINEM---PLKADALVW 622

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            T + AC +   +E G+     +I    R D      L+++YA  G      R+  +M +
Sbjct: 623 KTLLGACRSHDNIEVGEIAAKNVIELEPR-DPAPYVLLSNLYADAGLWDEVARIRSAMRD 681

Query: 563 RNV 565
            N+
Sbjct: 682 NNL 684



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 213/456 (46%), Gaps = 57/456 (12%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMG---SLRSSRLVFDTFK 56
           +  +CT L   R   +LH+  L  G   D   S  L++ YA+     ++  +  VF+  +
Sbjct: 260 MISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMR 319

Query: 57  EPDSFMWAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           + D   W  LI  Y+ +   E  ++ L+ +M+ E    ++  Y S+L+AC+++ D  SG 
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGR 379

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH  +IK        +  +++  Y E GC+++AR+VF+++  R ++S            
Sbjct: 380 QVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISC----------- 428

Query: 176 DVSEG--LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
            ++EG    + H + R  +     T  SL  A   +  L   + +H   L+     D  +
Sbjct: 429 -ITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFV 487

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            NS + MYS+CG L  A R+F +++ R   SWT+MIS   + G+ ++AL  F  M+    
Sbjct: 488 SNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV 547

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSEC 352
           +PN +T I VL +C+ +G +REGK     + R  G+ P         +E YA        
Sbjct: 548 KPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPR--------MEHYA-------- 591

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
                            ++   AR G+ KEALE + +M    L  D+    + L AC + 
Sbjct: 592 ----------------CMVDLLARSGLVKEALEFINEMP---LKADALVWKTLLGACRSH 632

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
            ++++G     +VI+++ +D      L ++Y+  G 
Sbjct: 633 DNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGL 668


>gi|125525878|gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indica Group]
          Length = 870

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 215/697 (30%), Positives = 360/697 (51%), Gaps = 50/697 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF+ C ++R L ++HA++   GL +D    ++++  YA +G+L  SRLV           
Sbjct: 54  LFQGCADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLV----------- 102

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
                               + K++ +  ++ N       RA            VH   +
Sbjct: 103 --------------------FQKIVNDDISLWNSAMVDYFRA-----------GVHADSL 131

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD--VSEG 180
           K     +  + +S++  Y +F   +D+R VF+++ ++D+V+++S+I  Y +  D      
Sbjct: 132 KLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNA 191

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIV 239
            ++   M++  +E + VT++SL +  G L +L+  +S+H + +RR I + D  L  S + 
Sbjct: 192 FEIATDMLQNNLEINRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVN 251

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
            Y++CG   SA  T ++  K    SW A++S  NR+G    A++    ML E K  P+ +
Sbjct: 252 FYTRCGAYQSAA-TVLQNSKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSV 310

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T   VL +CA L +     S+H   IR+ + P    L  ALIE Y +C ++   + +   
Sbjct: 311 TFANVLSACAELCYFCFAASIHAYFIRRFI-PMDVVLTTALIEVYTKCTRVMRSKYLFDQ 369

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++++S+N +I  Y +  M+ EA  LL  M   G+ PD  +V S L+A  +   L  G
Sbjct: 370 LIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRG 429

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             IHG  I+   C D  V++ ++ MYS CG    A  +F+ +++K++V W +M+ G   N
Sbjct: 430 RWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSN 489

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G++ E + LF  M     + D V+ +TA+QA S++G L   K +H  +    + KD    
Sbjct: 490 GHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITA 549

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            +L   YAKCG L  +  +F S+  RN+ +W+AMI  Y MHG   +   +FKQM +  I+
Sbjct: 550 NSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQ 609

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           P+E+TF  +L ACSH+G V++G   FN+M  ++ V P  +HY CMVDLL R+G +E  +K
Sbjct: 610 PDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYK 669

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            I         +I+ ALL+ CR H    +   I KEL
Sbjct: 670 FIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKEL 706


>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial; Flags: Precursor
 gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
           from Arabidopsis thaliana gb|AC008153 and contains
           multiple PPR PF|01535 repeats [Arabidopsis thaliana]
 gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 558

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 199/553 (35%), Positives = 308/553 (55%), Gaps = 16/553 (2%)

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T+LS A+      +L   + +H  V+    + +  LG+S    Y +   L  A  +F 
Sbjct: 10  LLTILSQAK------TLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFN 63

Query: 256 KIE--KRCTTSWTAMISCYNRSGW--FQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           +I   KR   SW  ++S Y++S    +   L  + +M    +  +   L+  + +C GLG
Sbjct: 64  RIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLG 123

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  G  +H   ++ G+  + DY+ P+L+E YA+ G M   +KV   I  RN + W +L+
Sbjct: 124 LLENGILIHGLAMKNGLDKD-DYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---I 428
             Y +     E   L   M+  GL  D+ ++   + ACGNV + ++G  +HG  I+   I
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           D + +++Q+S+IDMY KC   + A  LFE    ++VVMW ++I GF +   ++EA +LF 
Sbjct: 243 D-QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           QM    +  ++ T    + +CS++G L  GK VH  +I  G+  D    T+  DMYA+CG
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG 361

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           ++Q A+ VFD M ERNV+SWS+MI+ +G++G   +A   F +M    + PN VTF+++L 
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421

Query: 609 ACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSHSG+V+EG   F +M R +GV P+ +HYACMVDLL R+G+I  A   I +MP     
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA 481

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           S WGALL+ CRIHK +D+   I ++L       +  Y LLSNIYA+ G W+    VR  M
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKM 541

Query: 728 EVTGLKKVPGYST 740
            + G +K  G S 
Sbjct: 542 GIKGYRKHVGQSA 554



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 262/501 (52%), Gaps = 9/501 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-- 157
           ++L   S    L   ++VH ++I  GF+ + V+ +S+   Y +   LD A   F+++   
Sbjct: 9   ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68

Query: 158 SRDVVSWSSIIASYFDNADV--SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
            R+  SW++I++ Y  +     S+ L +++ M R     D   ++   +AC  L  L   
Sbjct: 69  KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             IHG  ++  +  D  +  S + MY++ G + SA++ F +I  R +  W  ++  Y + 
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
               +    F  M +     + +TLI ++ +C  +   + GK VH   IR+    + DYL
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ++I+ Y +C  +    K+     +RN++ W  LIS +A+   + EA +L  QM    +
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYL 454
           +P+  ++A+ L +C ++GSL+ G  +HG++I+   + + V  +S IDMY++CG   +A  
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+ + +++V+ W+SMI  F  NG   EA++ FH+M    +  + VTF++ + ACS+ G 
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428

Query: 515 LEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAM 571
           +++G W   + ++  YGV  +      + D+  + G++  A+   D+M  + + S W A+
Sbjct: 429 VKEG-WKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487

Query: 572 IDCYGMHGQLNDAASLFKQML 592
           +    +H +++ A  + +++L
Sbjct: 488 LSACRIHKEVDLAGEIAEKLL 508



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 219/429 (51%), Gaps = 18/429 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK---- 56
           + +      L    ++HA +++ G   +    + L  +Y     ++S+RL F T      
Sbjct: 11  LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAY-----IQSNRLDFATSSFNRI 65

Query: 57  ---EPDSFMWAVLIKCYMWNNF--FEESILLYHKMIREQATISNFIYPSVLRACSSLGDL 111
              + +   W  ++  Y  +    + + +LLY++M R    + +F     ++AC  LG L
Sbjct: 66  PCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
            +G  +HG  +K G DKDD +  S++  Y + G ++ A+KVFD++  R+ V W  ++  Y
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY 185

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKID 230
              +   E  ++F  M   G+  D +T++ L +ACG + + +  + +HG  +RR  I   
Sbjct: 186 LKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             L  S I MY KC  L +A + F     R    WT +IS + +     +A + F +ML 
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR 305

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG-PALIEFYAECGKM 349
               PN  TL  +L SC+ LG LR GKSVH  +IR G+  E D +   + I+ YA CG +
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI--EMDAVNFTSFIDMYARCGNI 363

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
                V   + ERN++SW+ +I+ +   G+ +EAL+   +M++  ++P+S +  S LSAC
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423

Query: 410 GNVGSLQLG 418
            + G+++ G
Sbjct: 424 SHSGNVKEG 432



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 207/398 (52%), Gaps = 12/398 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   +  GL  D   +  L+E YA++G++ S++ VFD     +S +W VL+K Y+  + 
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVIQT 134
             E   L+  M      +       +++AC ++     G+ VHG  I+  F D+ D +Q 
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           SI+  Y +   LD+ARK+F+    R+VV W+++I+ +       E   +F  M+RE + P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T+ ++  +C  L SLR  +S+HG+++R  I++D     SFI MY++CG++  A   F
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             + +R   SW++MI+ +  +G F++AL+ F KM      PN +T +++L +C+  G ++
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430

Query: 315 EG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS-WNMLIS 372
           EG K         G+ PE ++    +++     G++ E +  I  +  + + S W  L+S
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489

Query: 373 E---YARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
               +    ++ E  E L+ M+     P+  SV   LS
Sbjct: 490 ACRIHKEVDLAGEIAEKLLSME-----PEKSSVYVLLS 522


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 186/557 (33%), Positives = 307/557 (55%), Gaps = 9/557 (1%)

Query: 193 EPDFVTM-----LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           EP+   +     + + + C E   L+    IH H++R     +  L    I+ Y K G+ 
Sbjct: 29  EPELTHLSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGET 88

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
           ++A + F ++ +R   SWTA IS Y ++G +Q AL  F +M       N  T  +VL +C
Sbjct: 89  INARKVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRAC 148

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
            GL  L  G  +H   I+K       ++  AL++ +++CG M +   +   + ER+++SW
Sbjct: 149 TGLRCLERGMQIH-GCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSW 207

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +I  YA +  + ++  +   M   G+ PD F++ S L A     +L    QIHG +I+
Sbjct: 208 NAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQ 267

Query: 428 IDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN-SLEAIN 485
           +       +  SLID Y+K      A  L++ + +K V+ + +++ G+ +  + S EA++
Sbjct: 268 LGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALD 327

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF  M    +E+D+VTF T +  C++I  L  G+ +H   I Y    D+    AL DMYA
Sbjct: 328 LFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYA 387

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           K G+++ A R F  M E+NV+SW+++I  YG HG  ++A +L+K+M   G+KPN++TF++
Sbjct: 388 KSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLS 447

Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L+ACSHSG   EG   FN M   + + P  +HY+CM+DL +R G +E A+ MI  M   
Sbjct: 448 LLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIK 507

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            N S+WGA+L  C I+  + + +     L      ++  Y +L+ IYA  G+WD+  ++R
Sbjct: 508 PNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMR 567

Query: 725 SIMEVTGLKKVPGYSTI 741
           ++ME   LKK+PGYS I
Sbjct: 568 NLMEYRSLKKIPGYSII 584



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 175/618 (28%), Positives = 299/618 (48%), Gaps = 46/618 (7%)

Query: 62  MWAVLIKCYMWN----NFFEESILLYHKMIREQAT-ISNFIYPSVLRACSSLGDLGSGEK 116
           M  VL K + +N     F ++    +H     + T +S+ +Y  +L+ C    DL  G  
Sbjct: 1   MRGVLTKKFRYNLLQFTFLKQR--FHHSPCEPELTHLSSSLYMKILQLCIETEDLKQGCL 58

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  II+ GFD +  + T ++  Y +FG   +ARKVFD+M  R+VVSW++ I+ Y  N  
Sbjct: 59  IHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGH 118

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             + L +F  M R GV  +  T  S+  AC  L  L     IHG + + +   +  + ++
Sbjct: 119 YQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSA 178

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + ++SKCG++  A   F  + +R   SW A+I  Y    +   +   F  M+     P+
Sbjct: 179 LVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPD 238

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             TL +VL + +    L +   +H  II+ G G   D L  +LI+ YA+   M     + 
Sbjct: 239 CFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHID-LNGSLIDAYAKSEGMKSASALY 297

Query: 357 HAIGERNILSWNMLISEYARK-GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            ++ +++++S+  +++ YARK   S+EAL+L   MQ   +  D  +  + L+ C ++ SL
Sbjct: 298 KSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASL 357

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            +G QIH   IK     D    ++L+DMY+K G    A   F  +++K+V+ W S+I G+
Sbjct: 358 SIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGY 417

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            ++G   EAI L+ +M    L+ +++TFL+ + ACS+ G   +G W              
Sbjct: 418 GKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEG-W-------------- 462

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
                  +M  K   L  A+             +S MID +   GQL +A ++  +M   
Sbjct: 463 ---ECFNNMITKYNILPRAEH------------YSCMIDLFARGGQLEEAYNMICKM--- 504

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEG 653
            IKPN   +  IL ACS  G +  G+    A  +  ++P +  +Y  +  + + SG  + 
Sbjct: 505 NIKPNSSLWGAILGACSIYGHMSLGE--VAATHLLRMDPENSANYVVLAGIYAASGSWDK 562

Query: 654 AFKMIHSMPFPANGSIWG 671
           A +M + M + +   I G
Sbjct: 563 ACRMRNLMEYRSLKKIPG 580



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 249/475 (52%), Gaps = 11/475 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L++   +H+H++  G   +   ST+LI  Y + G   ++R VFD   E +   W   I 
Sbjct: 52  DLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQIS 111

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  N  +++++L++ +M R     + F Y SVLRAC+ L  L  G ++HG I K  F  
Sbjct: 112 GYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIG 171

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  +Q++++  + + G ++DAR +F+ M+ RDVVSW+++I  Y       +  +MF+SM+
Sbjct: 172 NLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMM 231

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            EGV PD  T+ S+ +A     +L     IHG +++        L  S I  Y+K   + 
Sbjct: 232 GEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMK 291

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
           SA   +  + K+   S+TA+++ Y R   + ++AL+ F  M  +  E + +T  T+L  C
Sbjct: 292 SASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVC 351

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           A +  L  G+ +H   I+    P YD   G AL++ YA+ G++ +  +  + + E+N++S
Sbjct: 352 ADIASLSIGRQIHALAIK--YKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVIS 409

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  LI+ Y + G   EA+ L  +M+  GL P+  +  S L AC + G    G +   ++I
Sbjct: 410 WTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMI 469

Query: 427 ---KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFY 475
               I  + E   S +ID++++ G    AY +  ++  K +  +W +++  C  Y
Sbjct: 470 TKYNILPRAEHY-SCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIY 523


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 216/673 (32%), Positives = 361/673 (53%), Gaps = 18/673 (2%)

Query: 81  LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY 140
           L+    IR   +++   + S+L++C        G+ VH R+I+   + D V+  S++  Y
Sbjct: 51  LMARDGIRPMDSVT---FSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLY 107

Query: 141 GEFGCLDDARKVFDKMT---SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
            + G L  A+ VF+ M     RDVVSWS+++A + +N    + +K+F   +  G+ P+  
Sbjct: 108 SKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDY 167

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLL-SAERTFV 255
              ++  AC     +   R I G +++    + D  +G S I M+ K  +   +A + F 
Sbjct: 168 CYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+ +    +WT MI+   + G+ ++A+  F+ M+    E +  TL +V  +CA L  L  
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAEC---GKMSECEKVIHAIGERNILSWNMLIS 372
           G+ +H   IR G+    D +  +L++ YA+C   G + +C KV   + + +++SW  LI+
Sbjct: 288 GRQLHSWAIRSGLA---DDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALIT 344

Query: 373 EYARK-GMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
            Y +   ++ EA+ L  +M T G + P+ F+ +S+  ACGNV   ++G Q+ GH  K   
Sbjct: 345 GYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGL 404

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             +  V +S+I M+ KC     A   FE + +K++V +N+ + G  +N +   A  L  +
Sbjct: 405 ASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSE 464

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           +    L +   TF + +   +N+G L KG+ +H +++  G+  +  +  AL  MY+KCG 
Sbjct: 465 IAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGS 524

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           + TA RVF  M  RNV+SW++MI  +  HG        F QM   G+KPNEVT++ IL A
Sbjct: 525 IDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSA 584

Query: 610 CSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSH G V EG  +FN+M     ++P ++HYACMVDLL R+G +  AF+ I++MPF A+  
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVL 644

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           +W   L  CR+H   ++ K   +++     N+   Y  LSNIYA  G W+E  ++R  M+
Sbjct: 645 VWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMK 704

Query: 729 VTGLKKVPGYSTI 741
              L K  G S I
Sbjct: 705 ERNLVKEGGCSWI 717



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 169/616 (27%), Positives = 305/616 (49%), Gaps = 25/616 (4%)

Query: 3   LFRSCTNLR--KLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT---FK 56
           L +SC   R  +L +L HA L+   +  D      LI  Y++ G L  ++ VF+T   F 
Sbjct: 68  LLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFG 127

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D   W+ ++ C+  N    ++I L+ + +      +++ Y +V+RACS+   +G G  
Sbjct: 128 KRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 117 VHGRIIKCG-FDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           + G ++K G F+ D  +  S++  +  GE    ++A KVFDKM+  +VV+W+ +I     
Sbjct: 188 ILGFLMKTGHFESDVCVGCSLIDMFVKGE-NSFENAYKVFDKMSELNVVTWTLMITRCMQ 246

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                E ++ F  MV  G E D  T+ S+  AC EL +L   R +H   +R  +  D  +
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD--V 304

Query: 234 GNSFIVMYSKC---GDLLSAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKML 289
             S + MY+KC   G +    + F +++     SWTA+I+ Y ++     +A+  F +M+
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMI 364

Query: 290 -EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
            +   EPN  T  +   +C  +   R GK V     ++G+          +  F  +C +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMF-VKCDR 423

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           M +      ++ E+N++S+N  +    R    + A ELL ++    L   +F+ AS LS 
Sbjct: 424 MEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSG 483

Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
             NVGSL+ G QIH  V+K+    ++ V ++LI MYSKCG  + A  +F  +  ++V+ W
Sbjct: 484 VANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISW 543

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI- 526
            SMI GF ++G +   +  F+QM    ++ +EVT++  + ACS++G + +G W H   + 
Sbjct: 544 TSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEG-WRHFNSMY 602

Query: 527 -SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
             + ++  +     + D+  + G L  A    ++M  + +V+ W   +    +H      
Sbjct: 603 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662

Query: 585 ASLFKQMLDSGIKPNE 600
               +++L+    PNE
Sbjct: 663 KLAARKILE--FDPNE 676



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 276/554 (49%), Gaps = 14/554 (2%)

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           +I  + +  D+   +     M R+G+ P D VT  SL ++C      R  + +H  ++  
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEF 91

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFV---KIEKRCTTSWTAMISCYNRSGWFQKAL 282
           +I+ D  L NS I +YSK GDL  A+  F    +  KR   SW+AM++C+  +G    A+
Sbjct: 92  EIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAI 151

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
           + FV+ LE+   PN      V+ +C+   ++  G+ +   +++ G       +G +LI+ 
Sbjct: 152 KLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDM 211

Query: 343 YAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
           + +         KV   + E N+++W ++I+   + G  +EA+   + M   G   D F+
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKC---GFKNLAYLLFER 458
           ++S  SAC  + +L LG Q+H   I+    D+ V+ SL+DMY+KC   G  +    +F+R
Sbjct: 272 LSSVFSACAELENLSLGRQLHSWAIRSGLADD-VECSLVDMYAKCSADGSVDDCRKVFDR 330

Query: 459 IQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLE 516
           +Q  SV+ W ++I G+ QN N + EAINLF +M     +E +  TF +A +AC N+    
Sbjct: 331 MQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPR 390

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK V       G+  +  +  ++  M+ KC  ++ A+  F+S+SE+N+VS++  +D   
Sbjct: 391 VGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTC 450

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
            +     A  L  ++ +  +  +  TF ++L   ++ GS+ +G+   + +   G+  +  
Sbjct: 451 RNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQP 510

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
               ++ + S+ G I+ A + + S+    N   W +++ G   H   + +     +++  
Sbjct: 511 VCNALISMYSKCGSIDTASR-VFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKE 569

Query: 697 GTNDN--GYYTLLS 708
           G   N   Y  +LS
Sbjct: 570 GVKPNEVTYVAILS 583


>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
 gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
          Length = 734

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 217/721 (30%), Positives = 379/721 (52%), Gaps = 23/721 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C + R ++   RLH  L  +G          +++ YA+ G L  ++  FD   + +
Sbjct: 20  LLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKN 79

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F+W ++I  Y  +    E++ L+HKM       + FI+ S L AC+ LGDL  G ++H 
Sbjct: 80  DFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGREIHK 136

Query: 120 RIIKC-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           R+++      D V+Q S++  Y   G + +  K+FD M  +++VSW+++I+++       
Sbjct: 137 RVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPE 196

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L+++H M RE +EP+     SL  AC  L +L+   SIH  +    ++ D  + N+ I
Sbjct: 197 QALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALI 256

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKCG +  A   F  +  R   +WT+MI+ Y + G+  +A   + +M      P   
Sbjct: 257 NMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSA 316

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE-YDYLGPALIEFYAECGKMSECEKVIH 357
           T + +L +C+ L    +GK +H ++  K  G E    +  AL+  Y+ CG + + E +  
Sbjct: 317 TFVALLSACSTL---EQGKHLHEEV--KAFGFESITVVETALMFMYSRCGSLEDAEFLFA 371

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +++ +SW+ +++ +A+ G   +AL L  QM   G+     +  S+L AC      +L
Sbjct: 372 KMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRL 431

Query: 418 GLQIHGHV--IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
              I   +    ID  D  +++ L+  YSKCG    A  +F+R++ + V+ W  MI G+ 
Sbjct: 432 SKTIRELIDWSGIDKMDS-IRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYA 490

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
           Q G+S  A+ LFH+M    +E D VTF + +QACSN   LE G+ VH ++++  G +   
Sbjct: 491 QQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILAAQGGKMSD 547

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           ++   L +MYA+CG ++ A+++F+SM   + +SWSA++     HGQ +D    ++ M++ 
Sbjct: 548 FLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNE 607

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL-QHYACMVDLLSRSGDIEG 653
           G+ P+ VT + IL +CSH+G  +E   YF  +      P L +HY CMVDLL R+G ++ 
Sbjct: 608 GVVPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRLDE 667

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A ++I  +  P +      +L  C+  + +        ++  T +     + LLS IYA 
Sbjct: 668 AEELISMIDRP-DVVTLNTMLAACKNQQDLHRGARTAAQMQSTESC-AAPFVLLSQIYAG 725

Query: 714 E 714
           E
Sbjct: 726 E 726



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 178/593 (30%), Positives = 304/593 (51%), Gaps = 20/593 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L+ C S  ++  G ++H  + + G+     ++  ++  Y + GCL DA+  FD++ 
Sbjct: 17  YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            ++   W+ +I+ Y  +    E L++FH M    + P+     S   AC  L  L   R 
Sbjct: 77  DKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGRE 133

Query: 218 IHGHVLR-RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           IH  VL  R I  D  + NS + MY++CG +L   + F  + ++   SW AMIS + +  
Sbjct: 134 IHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCD 193

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + ++ALE + +M   + EPN     ++L +CA LG L+ G S+H +I   G+  +   + 
Sbjct: 194 YPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDI-VME 252

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            ALI  Y++CG M E  +V   +  R++ +W  +I+ YA+ G   EA     +M+   + 
Sbjct: 253 NALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVS 312

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLL 455
           P S +  + LSAC    +L+ G  +H  V     +    V+++L+ MYS+CG    A  L
Sbjct: 313 PTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFL 369

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F ++QQK  V W++M+    Q G+  +A+ LF QM L  +++   TF +A+QACS     
Sbjct: 370 FAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDS 429

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
              K +   +   G+ K   I   L   Y+KCGD++ A+++FD M  R+V++W+ MI  Y
Sbjct: 430 RLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGY 489

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE--- 632
              G    A  LF +M   G++P+ VTF ++L ACS+   +E+G+      RI   +   
Sbjct: 490 AQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVH--ARILAAQGGK 544

Query: 633 -PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
             D      ++++ +R G +  A ++  SM   +  S W A++  C  H + D
Sbjct: 545 MSDFLGNG-LINMYARCGSMRDARQIFESMDRSSRIS-WSAIMTLCARHGQHD 595



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 308/620 (49%), Gaps = 21/620 (3%)

Query: 9   NLRKLTRLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           +L +   +H  +L +  +  D      L+  YA  GS+     +FD     +   W  +I
Sbjct: 127 DLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMI 186

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             ++  ++ E+++ LYH+M RE+   + F++ S+L AC+SLG+L  G  +H RI   G  
Sbjct: 187 SAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQ 246

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D V++ +++  Y + GC+D+A +VF  + +RDV +W+S+IA Y      SE    +  M
Sbjct: 247 RDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRM 306

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            R+ V P   T ++L  AC    +L   + +H  V     +    +  + + MYS+CG L
Sbjct: 307 RRDCVSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSL 363

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             AE  F K++++   SW+AM++ + + G   KAL  F +M+    + +L T  + L +C
Sbjct: 364 EDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQAC 423

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           +     R  K++   I   G+  + D +   L+  Y++CG M E  K+   +  R++L+W
Sbjct: 424 SLKRDSRLSKTIRELIDWSGI-DKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTW 482

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
            ++I  YA++G SK ALEL  +M+  G+ PDS + +S L AC N   L+ G ++H  ++ 
Sbjct: 483 TVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILA 539

Query: 428 IDCK--DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
                  +F+ + LI+MY++CG    A  +FE + + S + W++++    ++G   + I+
Sbjct: 540 AQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIID 599

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI---YID---TA 539
            +  M    +  D VT +  + +CS+ G  ++       +IS     D    ++D     
Sbjct: 600 TYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIIS-----DFELPHLDEHYQC 654

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           + D+  + G L  A+ +   +   +VV+ + M+        L+  A    QM  +     
Sbjct: 655 MVDLLCRAGRLDEAEELISMIDRPDVVTLNTMLAACKNQQDLHRGARTAAQMQSTESCAA 714

Query: 600 EVTFMNILWACSHSGSVEEG 619
               ++ ++A  H  +   G
Sbjct: 715 PFVLLSQIYAGEHHNTPVPG 734


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 194/597 (32%), Positives = 311/597 (52%), Gaps = 75/597 (12%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T  S+ + C  L S    + +H  +    + +D  LG   +  Y+ CGDL    R F  +
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 258 EK---------------------------------------------------RCTTSWT 266
           EK                                                   R   SW 
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           +MIS Y  +G  ++ L  + +M+ +  + +L T+I+VL  CA  G L  GK+VH   I+ 
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                 ++    L++ Y++CG +    +V   +GERN++SW  +I+ Y R G S  A++L
Sbjct: 281 SFERRINF-SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSK 445
           L QM+  G+  D  ++ S L AC   GSL  G  +H ++   + +   FV ++L+DMY+K
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           CG    A  +F  +  K ++ WN+MI                       L+ D  T    
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTMACV 438

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + AC+++  LE+GK +H  ++  G   D ++  AL D+Y KCG L  A+ +FD +  +++
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFN 624
           VSW+ MI  YGMHG  N+A + F +M D+GI+P+EV+F++IL+ACSHSG +E+G +F++ 
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI 558

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
               F +EP L+HYACMVDLLSR+G++  A++ I ++P   + +IWGALL GCR +  I+
Sbjct: 559 MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIE 618

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + + + +      ++GYY LL+NIYAE   W+E  ++R  +   GL+K PG S I
Sbjct: 619 LAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 254/550 (46%), Gaps = 87/550 (15%)

Query: 89  EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
           +++ +    Y SVL+ C+ L     G+KVH  I       D+ +   ++  Y   G L +
Sbjct: 93  KKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKE 152

Query: 149 ARKV---------------------------------------------------FDKMT 157
            R+V                                                   FDK+ 
Sbjct: 153 GRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLC 212

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDV+SW+S+I+ Y  N     GL ++  M+  G++ D  T++S+   C    +L   ++
Sbjct: 213 DRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKA 272

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H   ++   +      N+ + MYSKCGDL  A R F K+ +R   SWT+MI+ Y R G 
Sbjct: 273 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGR 332

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
              A++   +M +   + +++ + ++L +CA  G L  GK VH  I    M     ++  
Sbjct: 333 SDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL-FVCN 391

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL++ YA+CG M     V   +  ++I+SWN +I E                     L P
Sbjct: 392 ALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE---------------------LKP 430

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           DS ++A  L AC ++ +L+ G +IHG++++     D  V ++L+D+Y KCG   LA LLF
Sbjct: 431 DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           + I  K +V W  MI G+  +G   EAI  F++M    +E DEV+F++ + ACS+ G LE
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE 550

Query: 517 KGKWVHHKLISYGVRKDIYIDTAL------TDMYAKCGDLQTAQRVFDSMS-ERNVVSWS 569
           +G W       Y ++ D  I+  L       D+ ++ G+L  A    +++    +   W 
Sbjct: 551 QG-W----RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWG 605

Query: 570 AMI-DCYGMH 578
           A++  C   H
Sbjct: 606 ALLCGCRNYH 615



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 235/525 (44%), Gaps = 81/525 (15%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C  L+  T   ++H+ +    +  D     +L+  YA  G L+  R VFDT ++ + ++W
Sbjct: 109 CAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLW 168

Query: 64  AVLIKCYMWNNFFEESILLYHKMIRE-------------------------QATISNF-- 96
             ++  Y     F+ESI L+  M+ +                          + IS +  
Sbjct: 169 NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVS 228

Query: 97  ---------IYP---------------SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
                    IY                SVL  C++ G L  G+ VH   IK  F++    
Sbjct: 229 NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             ++L  Y + G LD A +VF+KM  R+VVSW+S+IA Y  +      +K+   M +EGV
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           + D V + S+  AC    SL   + +H ++    ++ +  + N+ + MY+KCG + +A  
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +  +   SW  MI                    E+K  P+  T+  VL +CA L  
Sbjct: 409 VFSTMVVKDIISWNTMIG-------------------ELK--PDSRTMACVLPACASLSA 447

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  GK +H  I+R G   +  ++  AL++ Y +CG +     +   I  ++++SW ++I+
Sbjct: 448 LERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIA 506

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ---IHGHVIKID 429
            Y   G   EA+    +M+  G+ PD  S  S L AC + G L+ G +   I  +   I+
Sbjct: 507 GYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIE 566

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
            K E   + ++D+ S+ G  + AY   E +       +W +++CG
Sbjct: 567 PKLEHY-ACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 52/114 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S + L +   +H ++L  G   D   +  L++ Y + G L  +RL+FD     D 
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + +  E+I  +++M           + S+L ACS  G L  G
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552


>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
 gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
          Length = 830

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 200/708 (28%), Positives = 363/708 (51%), Gaps = 17/708 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT-FKEPDSFMWAVLIKCYMWN 73
           R+H  +  +   +     T L+  YA+ GS+  +R VFD      +   W  ++  Y+  
Sbjct: 130 RVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVER 189

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
              E+++ L+ +M++E    +   Y SVL AC    DL +G KVH  I + G D D  + 
Sbjct: 190 GCLEQALTLFIEMLQEGVAPNEITYVSVLNAC----DLDAGRKVHRLIEQSGLDSDAFVG 245

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y   G L+DA  VFD +  R+++ W+S+IA Y    +    L+ F  M+ +G +
Sbjct: 246 NALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWK 305

Query: 194 PDFVTMLSLAEACGELCSLRPA--RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            D  T+L++ +AC +  +L+ +  ++IH   +   +  D  +G + + + S+ GD  SA+
Sbjct: 306 GDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAK 365

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  +  +   +W  M S Y + G  + A+E   +M   +  P+ +T +++L +C   G
Sbjct: 366 MVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATG 425

Query: 312 ---WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               L  GK  H +I+ +G   +   LG AL+  YA CG++ + + V   +  R+++SW 
Sbjct: 426 SSLGLETGKKTHEEILEQGYRLDA-VLGTALVRMYAACGRLDDAKLVFEKMESRDLISWT 484

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            ++  Y +  +  EA     ++Q  G  PD  ++ ++L AC N+ S +     H  + ++
Sbjct: 485 TMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACTNLSSAR---DFHERIRQL 541

Query: 429 DC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
              KD  V ++L+++YS CG    A   F+ I + SV+ WN +I    + G+   A +L 
Sbjct: 542 GWEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHTRLGHPDRAFDLL 601

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M L     D VT  T I + +++    KGK +H  ++  G+  D  + TAL + Y KC
Sbjct: 602 RAMELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEIDSVVATALVNFYGKC 661

Query: 548 GDLQTAQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           GD  TA+ +F  + +  NVV+W++ +  Y   G  ++A  +  +M+  G+ P  VTF+++
Sbjct: 662 GDFATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHVLAEMVQQGVAPTAVTFVSV 721

Query: 607 LWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L  C H+G  + G   F+++R  + ++P  +HY CM+DLL+R G +E A +++ +MP   
Sbjct: 722 LSVCGHAGVADVGCHLFSSLRWDYDMDPIPEHYGCMIDLLARGGWLEEARQLLKTMPTTP 781

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           +   W ALL+GC           +  +L    T  +  +  +SN+Y++
Sbjct: 782 DSIKWMALLSGCHGASVDKTGVFMAMQLLQQNTQSSSAHIAISNLYSK 829



 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 188/678 (27%), Positives = 338/678 (49%), Gaps = 15/678 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            R+C  L K   LHA ++  GL  +   +  ++  Y    S+ ++R VFD     D+ +W
Sbjct: 18  LRACHTLPKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMASRDAGLW 77

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           A ++  Y      +E+  L+H+M+ E          +V+ ACS  G L  G +VH RI  
Sbjct: 78  APMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEGRRVHRRIQG 137

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFD-KMTSRDVVSWSSIIASYFDNADVSEGLK 182
             F+    + T+++  Y + G +D+AR+VFD ++  +++VSW++++++Y +   + + L 
Sbjct: 138 SDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALT 197

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M++EGV P+ +T +S+  A    C L   R +H  + +  +  D  +GN+ I MY 
Sbjct: 198 LFIEMLQEGVAPNEITYVSVLNA----CDLDAGRKVHRLIEQSGLDSDAFVGNALIKMYR 253

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           +CG L  A   F  I  R    W +MI+ Y      Q  LE F KML    + +  TL+T
Sbjct: 254 RCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLT 313

Query: 303 VLGSCAGLGWLREG--KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           VL +CA    L+    +++H   +  G+  +   +G AL++  +E G     + V  ++ 
Sbjct: 314 VLDACAKSSTLQASSLQTIHDLAVESGLDSDT-LVGTALVKIKSEQGDRKSAKMVFDSLR 372

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS---LQL 417
            +++ +WN + S YA+ G  ++A+EL  QM+   + PD  +  S LSAC   GS   L+ 
Sbjct: 373 AKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLET 432

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G + H  +++   + D  + ++L+ MY+ CG  + A L+FE+++ + ++ W +M+  + Q
Sbjct: 433 GKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQ 492

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
                EA   F ++ L     D V  + A+ AC+N   L   +  H ++   G  KD  +
Sbjct: 493 ARLLDEASITFRRIQLEGHTPDRVALIAALGACTN---LSSARDFHERIRQLGWEKDPLV 549

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             AL ++Y+ CG L+ A   FD + E +V+SW+ +I  +   G  + A  L + M   G 
Sbjct: 550 ANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGH 609

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            P+ VT   ++ + +      +GK   +++   G+E D      +V+   + GD   A  
Sbjct: 610 NPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEIDSVVATALVNFYGKCGDFATARS 669

Query: 657 MIHSMPFPANGSIWGALL 674
           +   +    N   W + L
Sbjct: 670 IFQGVGAADNVVTWNSTL 687



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 238/435 (54%), Gaps = 20/435 (4%)

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
            T+  LA +     +L   + +H  ++   +  +  L N  + MY  C  + +A + F K
Sbjct: 9   TTVTDLAASLRACHTLPKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDK 68

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           +  R    W  M++ Y R G  Q+A   F +ML+    P+ +TL+TV+ +C+  G L EG
Sbjct: 69  MASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEG 128

Query: 317 KSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVI-HAIGERNILSWNMLIS 372
           + VH    R+  G ++++   +G AL+  YA+CG + E  +V  + +  +NI+SW  ++S
Sbjct: 129 RRVH----RRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVS 184

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDC 430
            Y  +G  ++AL L ++M   G+ P+  +  S L+AC     L  G ++H  + +  +D 
Sbjct: 185 AYVERGCLEQALTLFIEMLQEGVAPNEITYVSVLNAC----DLDAGRKVHRLIEQSGLD- 239

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            D FV ++LI MY +CG    A L+F+ I  +++++WNSMI G+     +   +  F +M
Sbjct: 240 SDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKM 299

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKG--KWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            L+  + D+ T LT + AC+    L+    + +H   +  G+  D  + TAL  + ++ G
Sbjct: 300 LLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQG 359

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           D ++A+ VFDS+  +++ +W+ M   Y  HG+L DA  L +QM    ++P++VTF++IL 
Sbjct: 360 DRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILS 419

Query: 609 ACSHSGS---VEEGK 620
           AC+ +GS   +E GK
Sbjct: 420 ACTATGSSLGLETGK 434


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 190/595 (31%), Positives = 330/595 (55%), Gaps = 16/595 (2%)

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE----PDFVTMLSLAEACGELCSLRP 214
           R+ VSW+S+I  + DN    E   +   M+ E  +    PD  T++++   C     +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + +HG  ++ ++  +  L N+ + MYSKCG + +A+  F     +   SW  M+  ++ 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 275 SGWFQKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            G      +   +ML   E+   + +T++  +  C    +L   K +HC  +++    E+
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ----EF 176

Query: 333 DY---LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            Y   +  A +  YA+CG +S  ++V H I  + + SWN LI  +A+    + +L+  +Q
Sbjct: 177 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGF 448
           M+  GL+PDSF+V S LSAC  + SL+LG ++HG +I+    +D FV  S++ +Y  CG 
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
                 LF+ ++ KS+V WN++I G+ QNG    A+ +F QM L  +++  ++ +    A
Sbjct: 297 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 356

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           CS +  L  G+  H   + + +  D +I  +L DMYAK G +  + +VF+ + E++  SW
Sbjct: 357 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 416

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR- 627
           +AMI  YG+HG   +A  LF++M  +G  P+++TF+ +L AC+HSG + EG  Y + M+ 
Sbjct: 417 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 476

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMI-HSMPFPANGSIWGALLNGCRIHKRIDVM 686
            FG++P+L+HYAC++D+L R+G ++ A +++   M   A+  IW +LL+ CRIH+ +++ 
Sbjct: 477 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 536

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +  +L          Y LLSN+YA  G W++  KVR  M    L+K  G S I
Sbjct: 537 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 591



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 294/564 (52%), Gaps = 24/564 (4%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQAT------ISNFIYPSVLRACSSLGDLGSGEK 116
           W  +I+ +  N F EES LL  +M+ E         ++  +  +VL  C+   ++G G+ 
Sbjct: 6   WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV--TVLPVCAREREIGLGKG 63

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VHG  +K   DK+ V+  +++  Y + GC+ +A+ +F    +++VVSW++++  +    D
Sbjct: 64  VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 123

Query: 177 VSEGLKMFHSMVR--EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
                 +   M+   E V+ D VT+L+    C     L   + +H + L+++   +  + 
Sbjct: 124 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 183

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+F+  Y+KCG L  A+R F  I  +   SW A+I  + +S   + +L++ ++M      
Sbjct: 184 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 243

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE-YDYLGPALIEFYAECGKMSECE 353
           P+  T+ ++L +C+ L  LR GK VH  IIR  +  + + YL  +++  Y  CG++   +
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQ 301

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +  A+ +++++SWN +I+ Y + G    AL +  QM  +G+     S+     AC  + 
Sbjct: 302 ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 361

Query: 414 SLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           SL+LG + H + +K   +D+ F+  SLIDMY+K G    +  +F  +++KS   WN+MI 
Sbjct: 362 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 421

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVR 531
           G+  +G + EAI LF +M       D++TFL  + AC++ G + +G +++     S+G++
Sbjct: 422 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 481

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVF-DSMSER-NVVSWSAMIDCYGMHGQL----NDAA 585
            ++     + DM  + G L  A RV  + MSE  +V  W +++    +H  L      AA
Sbjct: 482 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 541

Query: 586 SLFKQMLDSGIKPNEVTFMNILWA 609
            LF+   +   KP     ++ L+A
Sbjct: 542 KLFELEPE---KPENYVLLSNLYA 562



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 4/366 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L  L  LH + L     Y+   +   + SYA+ GSL  ++ VF   +      W  LI  
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 220

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           +  +N    S+  + +M        +F   S+L ACS L  L  G++VHG II+   ++D
Sbjct: 221 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 280

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +  S+L  Y   G L   + +FD M  + +VSW+++I  Y  N      L +F  MV 
Sbjct: 281 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 340

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            G++   ++M+ +  AC  L SLR  R  H + L+  ++ D  +  S I MY+K G +  
Sbjct: 341 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 400

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           + + F  ++++ T SW AMI  Y   G  ++A++ F +M      P+ +T + VL +C  
Sbjct: 401 SSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 460

Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI--HAIGERNILS 366
            G + EG     Q+    G+ P   +    +I+     G++ +  +V+      E ++  
Sbjct: 461 SGLIHEGLRYLDQMKSSFGLKPNLKHYA-CVIDMLGRAGQLDKALRVVAEEMSEEADVGI 519

Query: 367 WNMLIS 372
           W  L+S
Sbjct: 520 WKSLLS 525



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 201/501 (40%), Gaps = 65/501 (12%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ L+ L     +H  ++   L  D      ++  Y   G L + + +FD  ++  
Sbjct: 252 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 311

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ N F + ++ ++ +M+     +       V  ACS L  L  G + H 
Sbjct: 312 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 371

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K   + D  I  S++  Y + G +  + KVF+ +  +   SW+++I  Y  +    E
Sbjct: 372 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 431

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +K+F  M R G  PD +T L +  AC            H  ++   ++    + +SF +
Sbjct: 432 AIKLFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLIHEGLRYLDQMKSSFGL 480

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                              K     +  +I    R+G   KAL    +  E+ EE ++  
Sbjct: 481 -------------------KPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGI 519

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             ++L SC     L  G+ V  ++    + PE       L   YA  GK  +  KV   +
Sbjct: 520 WKSLLSSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 577

Query: 360 GERNI-----LSW--------NMLISEYARKGMSK-EALELLVQMQ--TWGLMPDSFSVA 403
            E ++      SW        + ++ E    G  + ++L  +++M+    G  PD+ SV 
Sbjct: 578 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 637

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS---LIDMYSK---CGFKNLAYLLFE 457
             LS    +       Q+ GH  K+      +++S    I +Y     C   + A  L  
Sbjct: 638 HDLSEEEKIE------QLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLIS 691

Query: 458 RIQQKSVVMWNSMICGFYQNG 478
           ++ ++ +V+ ++     ++NG
Sbjct: 692 KVMEREIVVRDNKRFHHFKNG 712


>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 199/617 (32%), Positives = 338/617 (54%), Gaps = 6/617 (0%)

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  +   ++  Y   GCL++ARKVFD++     V  ++++  Y  N   ++ +++   M 
Sbjct: 88  DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 147

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R  +E D  T     +AC  L        + G  + + +     LG+S +    K GD++
Sbjct: 148 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIM 207

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A+  F ++ ++    W  MI  + + G F++    F+ ML  K EP+ +T+I+++ SC 
Sbjct: 208 CAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCG 267

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +  L  GK +H  ++  GM  +   L   LI+ Y + G +     +   +  RN++SWN
Sbjct: 268 EMRNLTFGKCMHGFVLGFGMSRDTRVL-TTLIDMYCKSGDVESARWIFENMPSRNLVSWN 326

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
           ++IS Y + G+  E L L  ++    +  DS +V S +  C     L  G  +HG + + 
Sbjct: 327 VMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRR 386

Query: 429 DCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
                 V  ++++D+Y+KCG    A  +FER++ K+V+ W +M+ G  QNG++ +A+ LF
Sbjct: 387 GLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLF 446

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            QM    +  + +T ++ +  C+ +G L +G+ VH  L  +    ++ + TAL DMYAKC
Sbjct: 447 DQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKC 506

Query: 548 GDLQTAQRVFD-SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
             + +A+ VF   ++ ++V+ +++MI  YGMHG  + A  ++ +M   G++PNE TF+++
Sbjct: 507 SKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSL 566

Query: 607 LWACSHSGSVEEGKFYF-NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSHSG VEEG   F N ++     P  + YAC+VDLLSR+G +  A ++I+ MPF  
Sbjct: 567 LSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTP 626

Query: 666 NGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
              I   LLNGC +HK I++ +K  ++ LS+   N + Y T LSNIYA+   WD    VR
Sbjct: 627 TSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYIT-LSNIYAKASRWDSVKYVR 685

Query: 725 SIMEVTGLKKVPGYSTI 741
            +M    +KK+PGYS+I
Sbjct: 686 GLMMEQEIKKIPGYSSI 702



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 152/555 (27%), Positives = 284/555 (51%), Gaps = 5/555 (0%)

Query: 10  LRKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           L +L+  +  +++T   Y D     +L+ +Y+ +G L ++R VFD   +P + +   ++ 
Sbjct: 69  LDELSPSNREIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVN 128

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y+ N  + + I L   M R      ++     L+AC  L D   G +V G  +  G   
Sbjct: 129 GYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAG 188

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
              + +SIL    + G +  A+  F +M  +DVV W+ +I  +       EG  +F  M+
Sbjct: 189 GRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDML 248

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
              +EP  VTM+SL ++CGE+ +L   + +HG VL   +  D  +  + I MY K GD+ 
Sbjct: 249 YNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVE 308

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           SA   F  +  R   SW  MIS Y ++G   + L  F K++      +  T+++++  C+
Sbjct: 309 SARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCS 368

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               L  GK +H  I R+G+      L  A+++ YA+CG ++    V   +  +N++SW 
Sbjct: 369 RTADLDGGKILHGFIYRRGLDLNL-VLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWT 427

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            ++   A+ G +++AL+L  QMQ   +  ++ ++ S +  C  +G L+ G  +H  + + 
Sbjct: 428 AMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRF 487

Query: 429 DCKDE-FVQSSLIDMYSKCGFKNLAYLLFER-IQQKSVVMWNSMICGFYQNGNSLEAINL 486
               E  V ++LIDMY+KC   N A ++F+  +  K V+++NSMI G+  +G   +A+ +
Sbjct: 488 HFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCV 547

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYA 545
           +H+M    L+ +E TF++ + ACS+ G +E+G  +   ++  +       +   + D+ +
Sbjct: 548 YHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLS 607

Query: 546 KCGDLQTAQRVFDSM 560
           + G L+ A+ + + M
Sbjct: 608 RAGRLRQAEELINQM 622



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 234/463 (50%), Gaps = 8/463 (1%)

Query: 225 RKIKIDGPL-GNSFIVM-----YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           R+I I  P+ G+ F+V      YS  G L +A + F +I +  T    AM++ Y ++  +
Sbjct: 77  REIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERY 136

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
              +E    M     E +  T    L +C  L     G  V    + KG+     +LG +
Sbjct: 137 NDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGG-RFLGSS 195

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           ++ F  + G +   +   H + E++++ WN++I  + ++G+ +E   L + M    + P 
Sbjct: 196 ILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPS 255

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           + ++ S + +CG + +L  G  +HG V+     +D  V ++LIDMY K G    A  +FE
Sbjct: 256 AVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFE 315

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +  +++V WN MI G+ QNG  +E + LF ++ ++ +  D  T ++ IQ CS    L+ 
Sbjct: 316 NMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDG 375

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GK +H  +   G+  ++ + TA+ D+YAKCG L  A  VF+ M  +NV+SW+AM+     
Sbjct: 376 GKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQ 435

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
           +G   DA  LF QM +  +  N +T +++++ C+  G + EG+     +  F    ++  
Sbjct: 436 NGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVV 495

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
              ++D+ ++   I  A  +      P +  ++ ++++G  +H
Sbjct: 496 MTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMH 538



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 184/363 (50%), Gaps = 4/363 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L +SC  +R LT    +H  +L  G+  D    T LI+ Y + G + S+R +F+    
Sbjct: 260 ISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPS 319

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V+I  Y+ N    E++ L+ K+I +     +    S+++ CS   DL  G+ +
Sbjct: 320 RNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKIL 379

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG I + G D + V+ T+I+  Y + G L  A  VF++M +++V+SW++++     N   
Sbjct: 380 HGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 439

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + LK+F  M  E V  + +T++SL   C  L  LR  RS+H  + R     +  +  + 
Sbjct: 440 RDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTAL 499

Query: 238 IVMYSKCGDLLSAERTF-VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
           I MY+KC  + SAE  F   +  +    + +MIS Y   G   KAL  + +M     +PN
Sbjct: 500 IDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPN 559

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T +++L +C+  G + EG ++   +++       D L   +++  +  G++ + E++I
Sbjct: 560 ESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELI 619

Query: 357 HAI 359
           + +
Sbjct: 620 NQM 622


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 196/642 (30%), Positives = 338/642 (52%), Gaps = 8/642 (1%)

Query: 105 CSSLGDLGSGEKVHGRIIKC---GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           CS L  L  G  VH  ++        ++ V+   ++  YG     + AR VFD+M +++ 
Sbjct: 48  CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           VSW+S+IA++  N   ++ L +F SM+R G  PD   + S   AC EL  +   R +H  
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
            ++ +   D  + N+ + MYSK G +      F ++ ++   SW ++I+ + + G   +A
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEA 227

Query: 282 LESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           L+ F +M+ E    PN     +V  +C  LG L  G+ +H   ++  +     Y G +L 
Sbjct: 228 LQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLD-HNSYAGCSLS 286

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
           + YA C K+   ++V + I   +++SWN +I+  + +G+  EA+ LL +M+  GL PD  
Sbjct: 287 DMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGI 346

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERI 459
           +V   L AC    ++Q G  +H +++K+    D  V +SL+ MY++C   + A  +F   
Sbjct: 347 TVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHET 406

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
           + + VV WNS++    Q+ +      LF+ +  +   +D ++    + A + +G  E  K
Sbjct: 407 RDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVK 466

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCYGMH 578
            VH      G+  D  +   L D YAKCG L  A ++F+ M +  +V SWS++I  Y   
Sbjct: 467 QVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQS 526

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQH 637
           G    A  LF +M + G++PN VTF+ +L ACS  G V+EG +Y++ M    GV P  +H
Sbjct: 527 GYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREH 586

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
            +C++DLL+R+G +  A K +  MPF  +  +W  LL G + H  +++ +   + +    
Sbjct: 587 CSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNID 646

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            + +  Y LL NIY+  G+W+EF +++  M  +G+KK PG S
Sbjct: 647 PSHSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKS 688



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 176/641 (27%), Positives = 304/641 (47%), Gaps = 21/641 (3%)

Query: 7   CTNLRKLTR---LHAHLLVT---GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           C+ LR L     +H HLL +    L  +   +  LI  Y    +  S+RLVFD     + 
Sbjct: 48  CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             WA +I  +  N    +++ L+  M+R       F   S +RAC+ LGD+G G +VH +
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +K     D ++Q +++  Y + G + D   +F +M  +D +SW SIIA +       E 
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEA 227

Query: 181 LKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           L++F  MV EG+  P+     S+  ACG L SL     IH   ++ ++  +   G S   
Sbjct: 228 LQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSD 287

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY++C  L SA+R F  I+     SW ++I+  +  G   +A+    +M      P+ IT
Sbjct: 288 MYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGIT 347

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +  +L +C G   ++ G+ +H  +++ G+  +      +L+  YA C   S    V H  
Sbjct: 348 VRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCN-SLLSMYARCMDFSSAMDVFHET 406

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +R++++WN +++   +    +   +L   +Q      D  S+ + LSA   +G  ++  
Sbjct: 407 RDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVK 466

Query: 420 QIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQN 477
           Q+H    K+    D  + + LID Y+KCG  + A  LFE +   S V  W+S+I G+ Q+
Sbjct: 467 QVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQS 526

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYI 536
           G   +A++LF +M    +  + VTF+  + ACS +G +++G + +  +   +GV      
Sbjct: 527 GYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREH 586

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
            + + D+ A+ G L  A +  D M  E ++V W  ++     H  +       + +L+  
Sbjct: 587 CSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILN-- 644

Query: 596 IKPNE----VTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
           I P+     V   NI    S SG   E      AMR  GV+
Sbjct: 645 IDPSHSAAYVLLCNIY---SASGDWNEFARLKKAMRSSGVK 682


>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1251

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 201/597 (33%), Positives = 322/597 (53%), Gaps = 10/597 (1%)

Query: 151  KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            K F  ++S  V +W+  +    +  D  E L +F  M R G EP+  T   +A+AC  L 
Sbjct: 605  KCFPGLSS--VNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 662

Query: 211  SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
             +     +H H+++     D  +G + + M+ KC  L  A + F ++  R  T+W AM+S
Sbjct: 663  YIGYCEMVHTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLS 722

Query: 271  CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
             + +SG   K    F +M   +  P+ +T++T++ S +    L+  K +H   IR G+  
Sbjct: 723  GFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDL 782

Query: 331  EYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKGMSKEALELLV 388
            +   +    I  Y +CG +   + V  AI  G+R ++SWN +   +A  G + +A     
Sbjct: 783  QA-TVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYR 841

Query: 389  QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS--SLIDMYSKC 446
             M      PD  +  +  ++C N  +L  G  IH H I +   D+ +++  + I MYSK 
Sbjct: 842  LMLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGT-DQDIEAINTFISMYSKS 900

Query: 447  GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
            G    A LLF+ +  ++ V W  MI G+ + G+  EA+ LFH M    +  D VT L+ I
Sbjct: 901  GDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLI 960

Query: 507  QACSNIGQLEKGKWVHHKLISYGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
              C   G LE GKW+  +   YG +KD + +  AL DMY+KCG +  A+ +FD+ SE+ +
Sbjct: 961  SGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTM 1020

Query: 566  VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            V+W+ MI  Y ++G   +A  LF +M+D   KPN +TF+ +L AC+HSGS+E+G  YF+ 
Sbjct: 1021 VTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 1080

Query: 626  MR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
            M+ ++ + P L HY+CMVDLL R G ++ A ++IH+M    +  IWGALL+ C+IH+ + 
Sbjct: 1081 MKQVYNISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVK 1140

Query: 685  VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + +     L          Y  +SNIYA  G WD F ++RS+M++  +KK PG S I
Sbjct: 1141 IAEQAADSLFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVI 1197



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 175/604 (28%), Positives = 294/604 (48%), Gaps = 42/604 (6%)

Query: 63   WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
            W   ++  +  N   ES+LL+ +M R     +NF +P V +AC+ L  +G  E VH  +I
Sbjct: 616  WNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTHLI 675

Query: 123  KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
            K  F  D  + T+ +  + +   LD A KVF++M  RD  +W+++++ +  +    +   
Sbjct: 676  KSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFS 735

Query: 183  MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
            +F  M  + + PD VT+++L ++     SL+  + +H   +R  + +   + N++I  Y 
Sbjct: 736  LFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYG 795

Query: 243  KCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            KCGDL SA+  F  I++  R   SW ++   +   G    A   +  ML  + +P+L T 
Sbjct: 796  KCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTF 855

Query: 301  ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            I +  SC     L +G+ +H   I  G   + + +    I  Y++ G       +   + 
Sbjct: 856  INLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAIN-TFISMYSKSGDSCSARLLFDIMP 914

Query: 361  ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             R  +SW ++IS YA KG   EAL L   M   G+ PD  ++ S +S CG  GSL++G  
Sbjct: 915  SRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKW 974

Query: 421  IHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            I G      CK + V   ++LIDMYSKCG  + A  +F+   +K++V W +MI G+  NG
Sbjct: 975  IDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNG 1034

Query: 479  NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              LEA+ LF +M     + + +TFL  +QAC++ G LEKG W +     + + K +Y  +
Sbjct: 1035 IFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEY-----FHIMKQVYNIS 1088

Query: 539  ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
               D Y                        S M+D  G  G+L++A  L   M     KP
Sbjct: 1089 PGLDHY------------------------SCMVDLLGRKGKLDEALELIHNM---SAKP 1121

Query: 599  NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL-QHYACMVDLLSRSGDIEGAFKM 657
            +   +  +L AC    +V+  +   +++  F +EP +   Y  M ++ + +G  +G F  
Sbjct: 1122 DAGIWGALLSACKIHRNVKIAEQAADSL--FNLEPQMAAPYVEMSNIYAAAGMWDG-FAR 1178

Query: 658  IHSM 661
            I SM
Sbjct: 1179 IRSM 1182



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 227/499 (45%), Gaps = 16/499 (3%)

Query: 16   LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            +H HL+ +    D    T  ++ + +  SL  +  VF+     D+  W  ++  +  +  
Sbjct: 670  VHTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGH 729

Query: 76   FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             ++   L+ +M  ++    +    +++++ S    L   + +H   I+ G D    +  +
Sbjct: 730  TDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNT 789

Query: 136  ILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
             +  YG+ G LD A+ VF+ +    R VVSW+S+  ++    +  +    +  M+R+  +
Sbjct: 790  WISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFK 849

Query: 194  PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            PD  T ++LA +C    +L   R IH H +      D    N+FI MYSK GD  SA   
Sbjct: 850  PDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLL 909

Query: 254  FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
            F  +  R   SWT MIS Y   G   +AL  F  M +    P+L+TL++++  C   G L
Sbjct: 910  FDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSL 969

Query: 314  REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
              GK +  +    G   +   +  ALI+ Y++CG + E   +     E+ +++W  +I+ 
Sbjct: 970  EIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAG 1029

Query: 374  YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDC 430
            YA  G+  EA+EL  +M      P+  +  + L AC + GSL+ G     I   V  I  
Sbjct: 1030 YALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISP 1089

Query: 431  K-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV-MWNSMI--CGFYQNGNSLEA--- 483
              D +  S ++D+  + G  + A  L   +  K    +W +++  C  ++N    E    
Sbjct: 1090 GLDHY--SCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAAD 1147

Query: 484  --INLFHQMYLNCLEMDEV 500
               NL  QM    +EM  +
Sbjct: 1148 SLFNLEPQMAAPYVEMSNI 1166



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 186/382 (48%), Gaps = 13/382 (3%)

Query: 1    MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
            M L +S +   +L+ L  +HA  +  G+      S   I +Y + G L S++LVF+    
Sbjct: 753  MTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCGDLDSAKLVFEAIDR 812

Query: 58   PDSFM--WAVLIKCYMWNNFFEESILLYHKMIREQ--ATISNFIYPSVLRACSSLGDLGS 113
             D  +  W  + K +       ++   Y  M+R++    +S FI  ++  +C +   L  
Sbjct: 813  GDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFI--NLAASCQNPQTLTQ 870

Query: 114  GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
            G  +H   I  G D+D     + +  Y + G    AR +FD M SR  VSW+ +I+ Y +
Sbjct: 871  GRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAE 930

Query: 174  NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
              D+ E L +FH+M + GV PD VT+LSL   CG+  SL   + I G       K D  +
Sbjct: 931  KGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVM 990

Query: 234  G-NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
              N+ I MYSKCG +  A   F    ++   +WT MI+ Y  +G F +A+E F KM+++ 
Sbjct: 991  VCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLD 1050

Query: 293  EEPNLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +PN IT + VL +CA  G L +G +  H       + P  D+    +++     GK+ E
Sbjct: 1051 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS-CMVDLLGRKGKLDE 1109

Query: 352  CEKVIHAIGERNILS-WNMLIS 372
              ++IH +  +     W  L+S
Sbjct: 1110 ALELIHNMSAKPDAGIWGALLS 1131


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 196/648 (30%), Positives = 340/648 (52%), Gaps = 8/648 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSILCTYGEFGCLDDARKVFDKMTS 158
           +LR C     L   + VHG ++K  F      V+   +   Y +   +D A ++FD+M+ 
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           R+  SW+ +IA   +N    +G + F  M  +G+ PD      + + C  L S+     +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  ++ R       +  + + MY+K  ++  + + F  + +    SW AMI+ +  +  +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
             A + F++M+     P+  T I V  +   L  + + K V    +  G+      +G A
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN-TLVGTA 312

Query: 339 LIEFYAECGKMSECEKVI--HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
           LI+  ++CG + E   +   H I  R    WN +IS Y R G +++ALEL  +M    + 
Sbjct: 313 LIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYL 454
            D ++  S  +A   +  L LG ++H   IK   +  +V   +++ + Y+KCG       
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F R++ + ++ W S++  + Q     +AI +F  M    +  ++ TF + + +C+N+  
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL 492

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           LE G+ VH  +   G+  D  I++AL DMYAKCG L  A++VF+ +S  + VSW+A+I  
Sbjct: 493 LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAG 552

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
           +  HG ++DA  LF++M+  G++PN VTF+ +L+ACSH G VEEG  YF  M + +G+ P
Sbjct: 553 HAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVP 612

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           +++HYAC+VDLLSR G +  A + I  MP   N  +W  LL  CR+H  +++ +   +++
Sbjct: 613 EMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKI 672

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 ++  Y LLSN Y E G++ +   +R +M+  G+KK PG S I
Sbjct: 673 LSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWI 720



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 189/645 (29%), Positives = 325/645 (50%), Gaps = 13/645 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGL--HYDPPASTRLIESYAEMGSLRSSRLVFDTF 55
           + L R C + R L +   +H  LL +    H+       +  +Y++   + ++  +FD  
Sbjct: 72  VDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQM 131

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            + ++F W VLI     N  F +    + +M  +      F Y  +L+ C  L  +  G 
Sbjct: 132 SQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGN 191

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            VH +I+  GF     + T++L  Y +   ++D+ KVF+ MT  +VVSW+++I  +  N 
Sbjct: 192 MVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSND 251

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              +   +F  M+ EGV PD  T + +A+A G L  +  A+ + G+ L   +  +  +G 
Sbjct: 252 LYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGT 311

Query: 236 SFIVMYSKCGDLLSAERTFVK--IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           + I M SKCG L  A   F    I  R    W AMIS Y RSG+ +KALE F KM +   
Sbjct: 312 ALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDI 371

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             +  T  +V  + A L  L  GK VH + I+ G+   Y  +  A+   YA+CG + +  
Sbjct: 372 YLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVR 431

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV + + +R+++SW  L++ Y++     +A+E+   M+  G+ P+ F+ +S L +C N+ 
Sbjct: 432 KVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLC 491

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L+ G Q+HG + K+    D+ ++S+L+DMY+KCG    A  +F RI     V W ++I 
Sbjct: 492 LLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGV 530
           G  Q+G   +A+ LF +M    +E + VTFL  + ACS+ G +E+G   + KL+  +YG+
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEG-LQYFKLMKKTYGL 610

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFK 589
             ++     + D+ ++ G L  A      M  E N + W  ++    +HG + +   L  
Sbjct: 611 VPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNV-ELGELAA 669

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           Q + S    N  T++ +      SGS ++G    + M+  GV+ +
Sbjct: 670 QKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKE 714


>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
 gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 193/589 (32%), Positives = 322/589 (54%), Gaps = 11/589 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  RD+VSW+++I     N    + L++F  ++REG  P   T++ L  +CG    +   
Sbjct: 1   MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQG 60

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           RSIHG  ++  I +D  + N+   MY+K GDL +AE  F ++E +   SW  MI  Y  +
Sbjct: 61  RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGN 120

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G+F +++  F +M+E K E N +T++++L +          + +HC  I+ G+      +
Sbjct: 121 GFFNESMLVFKRMVEQKVEVNPVTIMSLLPANI------SPELIHCYAIKTGLINNGSVV 174

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             +L+  YA+CG     E +  +  ++N++S   +IS YA KG     +E   +MQ   +
Sbjct: 175 -TSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDM 233

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAY 453
             DS ++ S L    +   + +G+ +HG+ +K  +D  +  V + LI MY K      A 
Sbjct: 234 KLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHN-LVSNGLISMYFKFNDIEAAI 292

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            LF  + +K ++ WNS+I G  Q G + +A+  F QM +  L  D +T  + +  CS +G
Sbjct: 293 SLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLG 352

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  G+ +H+ ++   +  + ++ T+L DMY KCG +  A+RVF S+ E  V +W+ MI 
Sbjct: 353 YLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMIS 412

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            Y  +G  ++A + + +M + G++P+ +TF+ +L AC H G + EGK +F  M   FG+ 
Sbjct: 413 GYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMV 472

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P+LQH ACMV LL R+G  E A   I +M    + ++WGALLN C IH+ I + + + K+
Sbjct: 473 PNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKK 532

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L +    + G Y L+SN+YA    W++  K+R IM+  G     G S I
Sbjct: 533 LYLLDYKNCGLYVLMSNLYAATNRWNDAAKMREIMKDIGGDGTSGVSQI 581



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/537 (26%), Positives = 280/537 (52%), Gaps = 12/537 (2%)

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  LI     N +  +++ ++ +++RE  +        ++ +C     +  G  +H
Sbjct: 5   DIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSIH 64

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G  IK G D D  ++ ++   Y + G L+ A  +F+++  + VVSW+++I +Y  N   +
Sbjct: 65  GFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFFN 124

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E + +F  MV + VE + VT++SL  A     ++ P   IH + ++  +  +G +  S +
Sbjct: 125 ESMLVFKRMVEQKVEVNPVTIMSLLPA-----NISP-ELIHCYAIKTGLINNGSVVTSLV 178

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y+KCG    AE  +    ++   S TA+IS Y   G     +E F +M ++  + + +
Sbjct: 179 CLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDSV 238

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            ++++L        +  G ++H   ++ G+   ++ +   LI  Y +   +     + + 
Sbjct: 239 AMVSILHGITDPSHMSIGIALHGYALKNGL-DTHNLVSNGLISMYFKFNDIEAAISLFYE 297

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E+ ++SWN +IS   + G + +A++   QM+ +GL PD+ +VAS L+ C  +G L+LG
Sbjct: 298 MPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLG 357

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            ++H ++++ + + ++FV +SLIDMY+KCG   LA  +F+ I++  V  WN+MI G+   
Sbjct: 358 ERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYSWY 417

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDIY 535
           G    A+N + +M    LE D +TFL  + AC + G L +GK  H ++++  +G+  ++ 
Sbjct: 418 GLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGK-KHFQIMTEEFGMVPNLQ 476

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
               +  +  + G  + A     +M SE +   W A+++   +H ++     L K++
Sbjct: 477 HCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKKL 533



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 206/403 (51%), Gaps = 7/403 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   + TG+  D      L   YA+ G L ++ L+F+  ++     W  +I  Y  N F
Sbjct: 63  IHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGF 122

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F ES+L++ +M+ ++  ++     S+L A  S       E +H   IK G   +  + TS
Sbjct: 123 FNESMLVFKRMVEQKVEVNPVTIMSLLPANIS------PELIHCYAIKTGLINNGSVVTS 176

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++C Y + G  + A  ++     +++VS ++II+SY +  ++   ++ F  M +  ++ D
Sbjct: 177 LVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLD 236

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            V M+S+     +   +    ++HG+ L+  +     + N  I MY K  D+ +A   F 
Sbjct: 237 SVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFY 296

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++ ++   SW ++IS   ++G    A++ F +M      P+ IT+ ++L  C+ LG+LR 
Sbjct: 297 EMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRL 356

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H  I+R  +  E D++G +LI+ Y +CG +   E+V  +I E  + +WN +IS Y+
Sbjct: 357 GERLHNYILRNNLEVE-DFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYS 415

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             G+   AL    +M+  GL PD  +    L+AC + G L  G
Sbjct: 416 WYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEG 458



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 194/419 (46%), Gaps = 38/419 (9%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H + + TGL  +    T L+  YA+ GS   + L++ +F + +      +I  Y     
Sbjct: 158 IHCYAIKTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGN 217

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +  +  + +M +    + +    S+L   +    +  G  +HG  +K G D  +++   
Sbjct: 218 MDLVVECFSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNG 277

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +F  ++ A  +F +M  + ++SW+S+I+        S+ +K F  M   G+ PD
Sbjct: 278 LISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPD 337

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T+ SL   C +L  LR    +H ++LR  ++++  +G S I MY+KCG +L AER F 
Sbjct: 338 TITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFK 397

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I + C  +W  MIS Y+  G    AL  + KM E   EP+ IT + VL +C   G L E
Sbjct: 398 SIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHE 457

Query: 316 GKSVHCQIIRK--GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           GK  H QI+ +  GM P                  +  C  ++  +G             
Sbjct: 458 GKK-HFQIMTEEFGMVP-----------------NLQHCACMVGLLG------------- 486

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
             R G+ +EAL  +  M++    PDS    + L+AC     ++LG  +   +  +D K+
Sbjct: 487 --RAGLFEEALLFIKNMES---EPDSAVWGALLNACCIHQEIKLGECLAKKLYLLDYKN 540



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 4/162 (2%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR   RLH ++L   L  +    T LI+ Y + GS+  +  VF + +EP    W  +I  
Sbjct: 354 LRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISG 413

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y W      ++  Y KM  +        +  VL AC   G L  G+K H +I+   F   
Sbjct: 414 YSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKK-HFQIMTEEFGMV 472

Query: 130 DVIQ--TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSII 168
             +Q    ++   G  G  ++A      M S  D   W +++
Sbjct: 473 PNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALL 514


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 202/620 (32%), Positives = 339/620 (54%), Gaps = 73/620 (11%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+R G   D  T+  + +ACGEL S R   + HG +     + +  + N+ + MYS+CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 247 LLSAERTFVKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEP-----NL 297
           L  A   F +I +R      SW +++S + +S     AL+ F KM L V E+P     ++
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           I+++ +L +C  L  + + K VH   IR G   +  ++G ALI+ YA+CG M    KV +
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV-FVGNALIDAYAKCGLMENAVKVFN 179

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQ---------TW--------------- 393
            +  ++++SWN +++ Y++ G  K A EL   M+         TW               
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 394 -----------GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC------------ 430
                      G +P+  ++ S LSAC ++G+   G++IH + +K +C            
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLK-NCLLTLDNDFGGED 298

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           +D  V ++LIDMYSKC     A  +F+ I  ++++VV W  MI G  Q G+S +A+ LF 
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358

Query: 489 QMYLNC--LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA------L 540
           +M      +  +  T    + AC+++  +  GK +H    +Y +R   Y  +A      L
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIH----AYVLRHHQYDSSAYFVANCL 414

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            +MY+KCGD+ TA+ VFDSMS+++ +SW++M+  YGMHG+ ++A  +F +M  +G  P++
Sbjct: 415 INMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 474

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           +TF+ +L+ACSH G V++G  YF++M   +G+ P  +HYA  +DLL+R G ++ A+K + 
Sbjct: 475 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVK 534

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MP      +W ALL+ CR+H  +++ +    +L      ++G YTL+SNIYA  G W +
Sbjct: 535 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 594

Query: 720 FGKVRSIMEVTGLKKVPGYS 739
             ++R +M+ +G+KK PG S
Sbjct: 595 VARIRHLMKKSGIKKRPGCS 614



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 287/570 (50%), Gaps = 62/570 (10%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+R    + +F  P VL+AC  L     G   HG I   GF+ +  I  +++  Y   G 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 146 LDDARKVFDKMTSR---DVVSWSSIIASYFDNADVSEGLKMFHSM---VRE---GVEPDF 196
           L++A  +FD++T R   DV+SW+SI++++  +++    L +F  M   V E       D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           ++++++  ACG L ++   + +HG+ +R    +D  +GN+ I  Y+KCG + +A + F  
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKM---------------------------- 288
           +E +   SW AM++ Y++SG F+ A E F  M                            
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 289 LEVKEE-------PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM--------GPEYD 333
           L V  +       PN +T+I+VL +CA LG   +G  +H   ++  +        G + D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 334 YLG-PALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQM 390
            +   ALI+ Y++C        +   I   ERN+++W ++I  +A+ G S +AL+L V+M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 391 --QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSK 445
             + +G+ P++++++  L AC ++ ++++G QIH +V++    D    FV + LI+MYSK
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           CG  + A  +F+ + QKS + W SM+ G+  +G   EA+++F +M       D++TFL  
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 480

Query: 506 IQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ER 563
           + ACS+ G +++G  +       YG+           D+ A+ G L  A +    M  E 
Sbjct: 481 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEP 540

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
             V W A++    +H  +  A     ++++
Sbjct: 541 TAVVWVALLSACRVHSNVELAEHALNKLVE 570



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 219/485 (45%), Gaps = 72/485 (14%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-- 57
           + ++C  L   R  +  H  +   G   +      L+  Y+  GSL  + ++FD   +  
Sbjct: 16  VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 75

Query: 58  -PDSFMWAVLIKCYM-----WNN---FFEESILLYHKMIREQATISNFIYPSVLRACSSL 108
             D   W  ++  ++     W     F + +++++ K   E++ I + +  ++L AC SL
Sbjct: 76  IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV--NILPACGSL 133

Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
             +   ++VHG  I+ G   D  +  +++  Y + G +++A KVF+ M  +DVVSW++++
Sbjct: 134 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 193

Query: 169 ASYFDNADVS-----------------------------------EGLKMFHSMVREGVE 193
           A Y  + +                                     E L +F  M+  G  
Sbjct: 194 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 253

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLG---------NSFIVMYSK 243
           P+ VT++S+  AC  L +      IH + L+   + +D   G         N+ I MYSK
Sbjct: 254 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 313

Query: 244 CGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLIT 299
           C    +A   F  + +E+R   +WT MI  + + G    AL+ FV+M+       PN  T
Sbjct: 314 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 373

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD----YLGPALIEFYAECGKMSECEKV 355
           +  +L +CA L  +R GK +H  ++R     +YD    ++   LI  Y++CG +     V
Sbjct: 374 ISCILMACAHLAAIRIGKQIHAYVLRHH---QYDSSAYFVANCLINMYSKCGDVDTARHV 430

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
             ++ +++ +SW  +++ Y   G   EAL++  +M+  G +PD  +    L AC + G +
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490

Query: 416 QLGLQ 420
             GL 
Sbjct: 491 DQGLS 495



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 28/384 (7%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEP----DSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           ++  Y++ G+ +++  +F   ++     D   W  +I  Y       E++ ++ +MI   
Sbjct: 192 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 251

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-C---------GFDKDDVIQTSILCTY 140
           +  +     SVL AC+SLG    G ++H   +K C         G D+D ++  +++  Y
Sbjct: 252 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 311

Query: 141 GEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE--GVEPDF 196
            +      AR +FD   +  R+VV+W+ +I  +    D ++ LK+F  M+ E  GV P+ 
Sbjct: 312 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 371

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERT 253
            T+  +  AC  L ++R  + IH +VLR   + D     + N  I MYSKCGD+ +A   
Sbjct: 372 YTISCILMACAHLAAIRIGKQIHAYVLRHH-QYDSSAYFVANCLINMYSKCGDVDTARHV 430

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  + ++   SWT+M++ Y   G   +AL+ F KM +    P+ IT + VL +C+  G +
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490

Query: 314 REGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLI 371
            +G S    +    G+ P  ++   A I+  A  G++ +  K +  +  E   + W  L+
Sbjct: 491 DQGLSYFDSMSADYGLTPRAEHYAYA-IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALL 549

Query: 372 SE---YARKGMSKEALELLVQMQT 392
           S    ++   +++ AL  LV+M  
Sbjct: 550 SACRVHSNVELAEHALNKLVEMNA 573


>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
 gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
          Length = 691

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 200/674 (29%), Positives = 352/674 (52%), Gaps = 41/674 (6%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           + +R C  +  L  G+  H  +IK G+  +  I  +++  Y +F  L DA K+FD+M  +
Sbjct: 8   AAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVK 67

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPARSI 218
           ++V+W++++++Y  N    E +K++  M+    E P+      + +ACG +  +   R I
Sbjct: 68  NIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLI 127

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC-TTSWTAMISCYNRSGW 277
           H    R  +  D  L N+ + MY KCG L  A + F +I  R  +TSW  MIS Y + G 
Sbjct: 128 HKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGL 187

Query: 278 FQKALESFVKMLEV----------------------------KEEPNL--ITLITVLGSC 307
            ++A+  F +M +                             +E   L   T    L +C
Sbjct: 188 VEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTC 247

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI--HAIGERNI- 364
           +  G+L  GK +HC +++ G+     +   AL++ Y+ C  + +  ++   ++ G  +I 
Sbjct: 248 SYAGFLVAGKQIHCYVLKSGLESSC-FAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSIC 306

Query: 365 ---LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
              + WN ++S Y     ++ A+ ++ Q+   G   DS++++S+L  C N+ +++LG+Q+
Sbjct: 307 DSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQV 366

Query: 422 HGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H  ++    + D  V S L+D+Y+K G    A+ LF R+ +K +V W+ ++ G  +   +
Sbjct: 367 HALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELN 426

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
             A++LF  M    +E+D+      ++ CS++  +  GK VH   I  G   +    TAL
Sbjct: 427 SLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITAL 486

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMY+KCG+++    +F  +++R+VV W+ +I     +G+ N+A  +F+QM+ SG+KPNE
Sbjct: 487 IDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNE 546

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           VT++ +L AC H+G V E +  F  M+    +EP L+HY CMVDLL ++G  +   K+I 
Sbjct: 547 VTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIA 606

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
            MPF  + +IW ++L  C  H+   ++ TI + L     ND   Y +LSN Y   G WD 
Sbjct: 607 EMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANCPNDPSIYVMLSNAYGTLGMWDS 666

Query: 720 FGKVRSIMEVTGLK 733
             +VR   +  G+K
Sbjct: 667 LSQVREAAKKLGVK 680



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 172/643 (26%), Positives = 301/643 (46%), Gaps = 51/643 (7%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            R C  ++ L +    H+HL+ TG  ++   +  L+  YA+   L  +  +FD     + 
Sbjct: 10  IRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNI 69

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
             W  ++  Y  N    E+I LY +M+  ++ + N F+Y  VL+AC  +G++  G  +H 
Sbjct: 70  VTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHK 129

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK------------------------ 155
           R  +   D D V+  ++L  Y + GCL DARKVFD+                        
Sbjct: 130 RFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVE 189

Query: 156 --------MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
                   M  R+VVSW++IIA   +N   S  L+    M REG++ D  T     + C 
Sbjct: 190 EAVNLFNQMPDRNVVSWNTIIAGLAENGS-SRALQFVCKMHREGIKLDKFTFPCALKTCS 248

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS--- 264
               L   + IH +VL+  ++      ++ + MYS C  L  A R F +      +    
Sbjct: 249 YAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDS 308

Query: 265 ---WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
              W +M+S Y      + A+    ++       +  TL + L  C  L  +R G  VH 
Sbjct: 309 LVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHA 368

Query: 322 QIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            I+    G E DY +G  L++ YA+ G M +  K+ H + +++I++W+ L+   A+  ++
Sbjct: 369 LIVTS--GHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELN 426

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSL 439
             AL L   M T+G+  D + V++ L  C ++ S+  G Q+H   IK   + E V  ++L
Sbjct: 427 SLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITAL 486

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           IDMYSKCG      +LF  +  + VV W  +I G  QNG + EA+ +F QM  + L+ +E
Sbjct: 487 IDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNE 546

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           VT+L  + AC + G + + + +   +   + +   +     + D+  + G  +  +++  
Sbjct: 547 VTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIA 606

Query: 559 SMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            M  + +   WS+M+   G H      +++ + +L +   PN+
Sbjct: 607 EMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANC--PND 647



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 269/549 (48%), Gaps = 47/549 (8%)

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D   +++    CG + +L+  +S H H+++     +  +  + + MY+    L+ A + F
Sbjct: 2   DLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLF 61

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWL 313
            ++  +   +WT M+S Y  +G  ++A++ + +ML+ K E PN      VL +C  +G +
Sbjct: 62  DEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEI 121

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLI 371
             G+ +H +  R+ +  +YD  L  AL++ Y +CG +S+  KV   I  R N  SWN +I
Sbjct: 122 ELGRLIHKRFSRENL--DYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMI 179

Query: 372 SEYARKGMSKEALELLVQMQ-----TW-------------------------GLMPDSFS 401
           S Y ++G+ +EA+ L  QM      +W                         G+  D F+
Sbjct: 180 SGYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFT 239

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ 460
              +L  C   G L  G QIH +V+K   +   F  S+L+DMYS C   + A  LF++  
Sbjct: 240 FPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYS 299

Query: 461 Q------KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
                   S+V+WNSM+ G+  +  +  A+N+  Q++ +   +D  T  +A++ C N+  
Sbjct: 300 GGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLN 359

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI-D 573
           +  G  VH  +++ G   D  + + L D+YAK G+++ A ++F  + ++++V+WS ++  
Sbjct: 360 VRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMG 419

Query: 574 CYGMHGQLND-AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
           C  M  +LN  A SLF+ M+  G++ ++    N+L  CS   S+  GK         G E
Sbjct: 420 CAKM--ELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYE 477

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
            +      ++D+ S+ G++E    +   +    +   W  ++ GC  + R +    I ++
Sbjct: 478 TEQVTITALIDMYSKCGEVEDGLVLFGCVA-DRDVVCWTGIIVGCAQNGRANEALEIFRQ 536

Query: 693 LSVTGTNDN 701
           +  +G   N
Sbjct: 537 MVQSGLKPN 545



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD    + AI+ C  +  L++GK  H  LI  G   ++YI   L  MYA    L  A ++
Sbjct: 1   MDLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKL 60

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWACSHSGS 615
           FD M  +N+V+W+ M+  Y  +G+  +A  L+ +MLDS  + PN   +  +L AC   G 
Sbjct: 61  FDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGE 120

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           +E G+          ++ D+     ++D+  + G +  A K+   +   AN + W  +++
Sbjct: 121 IELGRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMIS 180

Query: 676 G 676
           G
Sbjct: 181 G 181


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 196/648 (30%), Positives = 340/648 (52%), Gaps = 8/648 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDD--VIQTSILCTYGEFGCLDDARKVFDKMTS 158
           +LR C     L   + VHG ++K  F      V+   +   Y +   +D A ++FD+M+ 
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           R+  SW+ +IA   +N    +G + F  M  +G+ PD      + + C  L S+     +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  ++ R       +  + + MY+K  ++  + + F  + +    SW AMI+ +  +  +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
             A + F++M+     P+  T I V  +   L  + + K V    +  G+      +G A
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN-TLVGTA 312

Query: 339 LIEFYAECGKMSECEKVI--HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
           LI+  ++CG + E   +   H I  R    WN +IS Y R G +++ALEL  +M    + 
Sbjct: 313 LIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYL 454
            D ++  S  +A   +  L LG ++H   IK   +  +V   +++ + Y+KCG       
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F R++ + ++ W S++  + Q     +AI +F  M    +  ++ TF + + +C+N+  
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL 492

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           LE G+ VH  +   G+  D  I++AL DMYAKCG L  A++VF+ +S  + VSW+A+I  
Sbjct: 493 LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAG 552

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
           +  HG ++DA  LF++M+  G++PN VTF+ +L+ACSH G VEEG  YF  M + +G+ P
Sbjct: 553 HAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVP 612

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
           +++HYAC+VDLLSR G +  A + I  MP   N  +W  LL  CR+H  +++ +   +++
Sbjct: 613 EMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKI 672

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 ++  Y LLSN Y E G++ +   +R +M+  G+KK PG S I
Sbjct: 673 LSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWI 720



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 189/645 (29%), Positives = 325/645 (50%), Gaps = 13/645 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGL--HYDPPASTRLIESYAEMGSLRSSRLVFDTF 55
           + L R C + R L +   +H  LL +    H+       +  +Y++   + ++  +FD  
Sbjct: 72  VDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQM 131

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
            + ++F W VLI     N  F +    + +M  +      F Y  +L+ C  L  +  G 
Sbjct: 132 SQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGN 191

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            VH +I+  GF     + T++L  Y +   ++D+ KVF+ MT  +VVSW+++I  +  N 
Sbjct: 192 MVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSND 251

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              +   +F  M+ EGV PD  T + +A+A G L  +  A+ + G+ L   +  +  +G 
Sbjct: 252 LYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGT 311

Query: 236 SFIVMYSKCGDLLSAERTFVK--IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           + I M SKCG L  A   F    I  R    W AMIS Y RSG+ +KALE F KM +   
Sbjct: 312 ALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDI 371

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             +  T  +V  + A L  L  GK VH + I+ G+   Y  +  A+   YA+CG + +  
Sbjct: 372 YLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVR 431

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           KV + + +R+++SW  L++ Y++     +A+E+   M+  G+ P+ F+ +S L +C N+ 
Sbjct: 432 KVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLC 491

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L+ G Q+HG + K+    D+ ++S+L+DMY+KCG    A  +F RI     V W ++I 
Sbjct: 492 LLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGV 530
           G  Q+G   +A+ LF +M    +E + VTFL  + ACS+ G +E+G   + KL+  +YG+
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEG-LQYFKLMKKTYGL 610

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFK 589
             ++     + D+ ++ G L  A      M  E N + W  ++    +HG + +   L  
Sbjct: 611 VPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNV-ELGELAA 669

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           Q + S    N  T++ +      SGS ++G    + M+  GV+ +
Sbjct: 670 QKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKE 714


>gi|297810955|ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319198|gb|EFH49620.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 849

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 215/787 (27%), Positives = 406/787 (51%), Gaps = 51/787 (6%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C ++ +LT    LH  +   G       S  ++  YA+   +   + +F     
Sbjct: 25  LDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQMDS 84

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEK 116
            D  +W +++   +  +   E++  +  M   ++   S+  +  +L  C  LGD  +G+ 
Sbjct: 85  VDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKS 143

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +H  IIK G +KD ++  +++  Y +FG  + DA   FD +  +DVVSW++IIA + +N 
Sbjct: 144 MHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENK 203

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEAC---GELCSLRPARSIHGHVLRRK-IKIDG 231
            +++  + F  M++E  EP++ T+ ++   C   G+  + R  R IH +V++R  ++   
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHV 263

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + NS +  Y + G +  A   F ++  +   SW  +I+ Y  +  + KAL+ F  +++ 
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQ- 322

Query: 292 KEEPNL--ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
           K + +L  +T++++L  CA L  L  GK +H  I+R     E   +G ALI FYA  G  
Sbjct: 323 KGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
           S        +  ++I+SWN ++  +A      + L LL  +    +  DS ++ S L  C
Sbjct: 383 SAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFC 442

Query: 410 GNVGSLQLGLQIHGHVIKI----DCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSV 464
            NV  +    ++HG+ +K     + ++  + ++L+D Y+KCG    A+ +F+ + +++++
Sbjct: 443 TNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTL 502

Query: 465 VMWNSMICGFYQNGN-------------------SL------------EAINLFHQMYLN 493
           V +NS++ G+  +G+                   SL            EAI +F ++   
Sbjct: 503 VTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQAR 562

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +  + VT +  +  C+ +  L   +  H  +I  G   DI +   L D+YAKCG L+ A
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR-GRLGDIRLKGTLLDVYAKCGSLKHA 621

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
             VF S + R++V ++AM+  Y +HG+  +A  +F  M+DS IKP+ V    +L AC H+
Sbjct: 622 YSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDHVFITTLLTACCHA 681

Query: 614 GSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G +++G   ++++R + G++P ++ YAC VDLL+R G ++ A+  I  MP   N +IWG 
Sbjct: 682 GLIQDGLQIYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNANIWGT 741

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C  + R+D+  ++   L    ++D G + L+SN+YA +  W+   ++R++M+   +
Sbjct: 742 LLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEM 801

Query: 733 KKVPGYS 739
           KK  G S
Sbjct: 802 KKPAGCS 808



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 310/629 (49%), Gaps = 46/629 (7%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           ++  V++AC+S+ +L SG  +HG + K G      +  S+L  Y +   +DD +K+F +M
Sbjct: 23  VFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQM 82

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPA 215
            S D V W +I+ +    +   E ++ F +M   +  +P  VT   L   C  L      
Sbjct: 83  DSVDPVVW-NIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNG 141

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNR 274
           +S+H ++++  ++ D  +GN+ + MY+K G ++  A   F  I  +   SW A+I+ ++ 
Sbjct: 142 KSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSE 201

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG---WLREGKSVHCQIIRKGMGPE 331
           +     A  SF  ML+   EPN  T+  VL  CA +G     R G+ +H  ++++     
Sbjct: 202 NKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQT 261

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM- 390
           + ++  +L+ FY   G++ E   +   +G ++++SWN++I+ YA      +AL+L   + 
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLV 321

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGF 448
           Q   +  DS ++ S L  C  +  L  G +IH ++++     +D  V ++LI  Y++ G 
Sbjct: 322 QKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + AY  F  +  K ++ WN+++  F  +    + +NL H ++   + +D VT L+ ++ 
Sbjct: 382 TSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKF 441

Query: 509 CSNIGQLEKGKWVHHKLISYGV---RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-- 563
           C+N+  + K K VH   +  G+    ++  +  AL D YAKCG+++ A ++F  +SER  
Sbjct: 442 CTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRT 501

Query: 564 ------------------------------NVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
                                         ++ +WS M+  Y      N+A  +F+++  
Sbjct: 502 LVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQA 561

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            G++PN VT MN+L  C+   S+   +   +   I G   D++    ++D+ ++ G ++ 
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVR-QCHGYIIRGRLGDIRLKGTLLDVYAKCGSLKH 620

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           A+ +  S     +  ++ A++ G  +H R
Sbjct: 621 AYSVFQS-DARRDLVMFTAMVAGYAVHGR 648



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 263/568 (46%), Gaps = 29/568 (5%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G   D    L + +AC  +  L   R++HG V +        +  S + MY+KC  +   
Sbjct: 16  GFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDC 75

Query: 251 ERTFVKIEKRCTTSWTAM-----ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           ++ F +++      W  +     +SC   +  F KA+         + +P+ +T   +L 
Sbjct: 76  QKMFRQMDSVDPVVWNIVLTGLSVSCGRETMRFFKAMH-----FADEPKPSSVTFAILLP 130

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGK-MSECEKVIHAIGERN 363
            C  LG    GKS+H  II+ G+  E D L G AL+  YA+ G  + +       I +++
Sbjct: 131 VCVRLGDSYNGKSMHSYIIKTGL--EKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKD 188

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQLGLQ 420
           ++SWN +I+ ++   M  +A      M      P+  ++A+ L  C ++G   + + G Q
Sbjct: 189 VVSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQ 248

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IH +V++        FV +SL+  Y + G    A  LF R+  K +V WN +I G+  N 
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNH 308

Query: 479 NSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYI 536
             L+A+ LFH +     + +D VT L+ +  C+ +  L  GK +H  ++ +  + +D  +
Sbjct: 309 EWLKALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSV 368

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             AL   YA+ GD   A   F  MS ++++SW+A++D +    +     +L   + +  I
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAI 428

Query: 597 KPNEVTFMNILWACSHS---GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
             + VT +++L  C++    G V+E   Y     +   E + +    ++D  ++ G++E 
Sbjct: 429 TLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEY 488

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A K+   +        + +LL+G       D  + +  E+S   T D   ++L+  IYAE
Sbjct: 489 AHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMS---TTDLTTWSLMVRIYAE 545

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               +E   V   ++  G++  P   TI
Sbjct: 546 SCFPNEAIGVFREIQARGMR--PNTVTI 571


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 206/732 (28%), Positives = 380/732 (51%), Gaps = 8/732 (1%)

Query: 6   SCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           S  NL+ L     +H+ ++  GL      +  L+  Y++  S+  +R  FD     D   
Sbjct: 28  SLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVS 87

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  ++ N   EE++ ++  M+      + F + S+LR+C +LGD   G+++H   I
Sbjct: 88  WTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSI 147

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K GF+ + ++ +S++  Y  F   +DA K+F  M S D VSW+++IAS       S  L+
Sbjct: 148 KHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALR 207

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           ++  M+   V  +  T + L  A      L+  + IH H +   +K++  L  + + MYS
Sbjct: 208 IYMEMLEAQVSSNEFTFVRLL-AASSFIGLQYGKLIHAHAIVLGVKLNLVLKTALVNMYS 266

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           +C  +  A +      +     WTA+IS   ++  FQ+A+ +F KM       +  T ++
Sbjct: 267 RCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLS 326

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE-KVIHAIGE 361
           +L  C  +  L  G+ +H ++IR G+  +   +G AL++ Y +C  + E   ++   I  
Sbjct: 327 MLSVCISILSLDLGRQIHSRVIRTGLEDDVP-VGNALVDMYMKCSCIVEHGLRMFRGIKS 385

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            N++SW  LI+ +A  G  +++L L ++M+T G+ P+SF+++  L  C  + S    L++
Sbjct: 386 PNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKL 445

Query: 422 HGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           HGH+IK     D  V ++L+D Y+  G  + A+ + + + Q+  + + S+     Q G  
Sbjct: 446 HGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYH 505

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
             A+++   M+   +++D  +      A +++G++E GK +H   +  G+   + +   L
Sbjct: 506 ELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANGL 565

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            D+Y K G +  A+R F  ++E +VVSW+ +I     +G ++ A S F  M   GI+P+ 
Sbjct: 566 IDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDS 625

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           +TF+ +L  CSH G V+ G  YF++MR +  VEP   HY C+VD+L R+G +E A  +I 
Sbjct: 626 ITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIE 685

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
           +MP   + SI+  LL  C IH+ +++ + + +        D  ++ LL  +Y + G +D 
Sbjct: 686 TMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVKLYDDCGRYDL 745

Query: 720 FGKVRSIMEVTG 731
             K R  ++  G
Sbjct: 746 GEKTRRSIKQKG 757



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 143/276 (51%), Gaps = 3/276 (1%)

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           V S + +  N+ SL+ G+ IH  +IK+  +D  ++ ++L+ +YSKC     A   F+ + 
Sbjct: 22  VCSKVVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMP 81

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            + VV W  ++    +N    EA+++F  M L+    +  TF + +++C  +G    GK 
Sbjct: 82  CRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKR 141

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H   I +G   +  + ++L D+Y++    + A ++F  M   + VSW+ +I      G+
Sbjct: 142 IHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGK 201

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
            + A  ++ +ML++ +  NE TF+ +L A S  G ++ GK       + GV+ +L     
Sbjct: 202 CSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIG-LQYGKLIHAHAIVLGVKLNLVLKTA 260

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +V++ SR   IE A K+    P   +  +W A+++G
Sbjct: 261 LVNMYSRCQRIEDAIKVSKLTP-EYDVILWTAIISG 295


>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 204/671 (30%), Positives = 341/671 (50%), Gaps = 44/671 (6%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR C     +   + +H  IIK G      +  SI+  Y +    DDAR +FD+M  R++
Sbjct: 10  LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
           VS++++++++ ++    E L +++ M+  + V+P+     ++ +ACG +  +     +H 
Sbjct: 70  VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
           HV   +++ D  L N+ + MY KCG L+ A+R F +I  + +TSW  +I  + + G  + 
Sbjct: 130 HVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRD 189

Query: 281 ALESFVKMLEVKEEPNLI----------------------------------TLITVLGS 306
           A   F +M     EP+L+                                  T    L +
Sbjct: 190 AFNLFDQM----PEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKA 245

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI--HAIGERNI 364
           C  LG L  G+ +HC II+ G+     Y   +LI+ Y+ C  + E  K+   ++    ++
Sbjct: 246 CGLLGELTMGRQIHCCIIKSGLECSC-YCISSLIDMYSNCKLLDEAMKIFDKNSPLAESL 304

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
             WN ++S Y   G    AL ++  M   G   DS++ + +L  C    +L+L  Q+HG 
Sbjct: 305 AVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGL 364

Query: 425 VIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           +I    + D  V S LID+Y+K G  N A  LFER+  K VV W+S+I G  + G     
Sbjct: 365 IITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLV 424

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
            +LF  M    LE+D       ++  S++  L+ GK +H   +  G   +  I TALTDM
Sbjct: 425 FSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDM 484

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG+++ A  +FD + E + +SW+ +I     +G+ + A S+  +M++SG KPN++T 
Sbjct: 485 YAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITI 544

Query: 604 MNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + +L AC H+G VEE    F ++    G+ P  +HY CMVD+ +++G  + A  +I+ MP
Sbjct: 545 LGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMP 604

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
           F  + +IW +LL+ C  +K   +   + + L  T   D   Y +LSN+YA  G WD   K
Sbjct: 605 FKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIMLSNVYASLGMWDNLSK 664

Query: 723 VRSIMEVTGLK 733
           VR  +   G+K
Sbjct: 665 VREAVRKVGIK 675



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 162/634 (25%), Positives = 287/634 (45%), Gaps = 43/634 (6%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           ++    LH+ ++  GL         +I  YA+      +R +FD     +   +  ++  
Sbjct: 19  IKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSFTTMVSA 78

Query: 70  YMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
           +  +    E++ LY+ M+  +    N F+Y +VL+AC  +GD+  G  VH  + +   + 
Sbjct: 79  FTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEF 138

Query: 129 DDVIQTSILCTYGEFGCLDDARKV-------------------------------FDKMT 157
           D V+  ++L  Y + G L DA++V                               FD+M 
Sbjct: 139 DTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMP 198

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             D+VSW+SIIA   DNA     L+    M  +G++ D  T     +ACG L  L   R 
Sbjct: 199 EPDLVSWNSIIAGLADNAS-PHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQ 257

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT--SWTAMISCYNRS 275
           IH  +++  ++      +S I MYS C  L  A + F K      +   W +M+S Y  +
Sbjct: 258 IHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVAN 317

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY- 334
           G + +AL     M     + +  T    L  C     LR    VH  II +G   E D+ 
Sbjct: 318 GDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGY--ELDHV 375

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G  LI+ YA+ G ++   ++   +  +++++W+ LI   AR G+      L + M    
Sbjct: 376 VGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLD 435

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAY 453
           L  D F ++  L    ++ SLQ G QIH   +K   + E  + ++L DMY+KCG    A 
Sbjct: 436 LEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDAL 495

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            LF+ + +   + W  +I G  QNG + +AI++ H+M  +  + +++T L  + AC + G
Sbjct: 496 ALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAG 555

Query: 514 QLEKGKWVHHKLI--SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSA 570
            +E+  W   K I   +G+         + D++AK G  + A+ + + M  + +   W +
Sbjct: 556 LVEEA-WTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCS 614

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           ++D  G +   + A  + + +L +  +   V  M
Sbjct: 615 LLDACGTYKNRHLANIVAEHLLATSPEDASVYIM 648



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 99/198 (50%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NLR  +++H  ++  G   D    + LI+ YA+ G++ S+  +F+     D   W+ LI 
Sbjct: 354 NLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIV 413

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
                        L+  M+     I +F+   VL+  SSL  L SG+++H   +K G++ 
Sbjct: 414 GCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYES 473

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           + VI T++   Y + G ++DA  +FD +   D +SW+ II     N    + + + H M+
Sbjct: 474 ERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMI 533

Query: 189 REGVEPDFVTMLSLAEAC 206
             G +P+ +T+L +  AC
Sbjct: 534 ESGTKPNKITILGVLTAC 551



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD      A++ C     ++  K +H  +I  G+   I++  ++  +YAKC     A+ +
Sbjct: 1   MDLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTL 60

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS-GIKPNEVTFMNILWACSHSGS 615
           FD M  RN+VS++ M+  +   G+ ++A +L+  ML+S  ++PN+  +  +L AC   G 
Sbjct: 61  FDEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGD 120

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           VE G      +    +E D      ++D+  + G +  A ++ H +P   N + W  L+ 
Sbjct: 121 VELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCK-NSTSWNTLIL 179

Query: 676 G 676
           G
Sbjct: 180 G 180



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 46/104 (44%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  +L+   ++H+  L  G   +   +T L + YA+ G +  +  +FD   E D+  W  
Sbjct: 452 SLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTG 511

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
           +I     N   +++I + HKMI      +      VL AC   G
Sbjct: 512 IIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAG 555


>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
 gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 192/582 (32%), Positives = 311/582 (53%), Gaps = 5/582 (0%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+S I    +  + S+ L +FH +   G++P+  T   L++AC +L  L  ++ IH HV+
Sbjct: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           +     D  +  + + MY KCG +  A   F K+  R   SW AMI  +++ G   +   
Sbjct: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
            F+ M  V   P+  T+I +  +      LR  K+VH   I  G+  +   +    I  Y
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTS-VSNTWIAAY 198

Query: 344 AECGKMSECEKVIHAIGE--RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
           ++CG++   + V H I +  R+ +SWN LI+ YA  G   +A++    +   G  PD+ +
Sbjct: 199 SKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDAST 258

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQ 460
           + S LS+C    +L  G  IHGH  ++ C  +  + ++LI MYS+CG  + A +LF+ + 
Sbjct: 259 IISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMS 318

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            ++ V W +MI G+ + G   +A+ LF+ M     + D VT L+ I  C   G L  G W
Sbjct: 319 IRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHW 378

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           + +    + ++KD+ +  AL DMYAKCG L  A+ +F S+  R VVSW+AMI    ++G+
Sbjct: 379 IDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGE 438

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYA 639
             +A  LF  + +SGI+PN +TF+ +L AC H G +E+G+  F  M   +G+ P L HY+
Sbjct: 439 FREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYS 498

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
           CM+DLL R G +  A ++I  MP   +  IWGALL  C+IH  +++ + + + L      
Sbjct: 499 CMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPR 558

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               +  ++NIYA  G WDE   +R  M    ++K PG S +
Sbjct: 559 VAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVV 600



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 278/567 (49%), Gaps = 55/567 (9%)

Query: 78  ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
           +++ L+H++       +NF +P + +AC+ L  L + + +H  ++K  F  D  +QT+++
Sbjct: 35  KALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMV 94

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
             Y + G +DDA  +FDKM  R++ SW+++I  +     +     +F  M   G  PD  
Sbjct: 95  DMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAA 154

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T++ L  A     SLR  +++H   +   +  D  + N++I  YSKCG+L  A+  F  I
Sbjct: 155 TVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGI 214

Query: 258 EK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +K  R + SW ++I+CY   G +  A++S+  +L    +P+  T+I++L SC     L  
Sbjct: 215 QKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIY 274

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  +H    + G   +   +   LI  Y+ CG +S    +   +  R  +SW  +IS Y+
Sbjct: 275 GFLIHGHGFQLGCDSDISLIN-TLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYS 333

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG----HVIKIDCK 431
             G   +AL L   M+  G  PD  +V S +S CG  G+L LG  I      H +K   K
Sbjct: 334 EVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELK---K 390

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V ++LIDMY+KCG  N A  +F  +  ++VV W +MI     NG   EA++LF  + 
Sbjct: 391 DVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLS 450

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            + +E + +TFL  +QAC + G LEKG+                                
Sbjct: 451 ESGIEPNNITFLAVLQACCHGGYLEKGR-------------------------------- 478

Query: 552 TAQRVFDSMSERNVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
                F  M+ER  ++     +S MID  G  G+L +A  + + M    +KP+E  +  +
Sbjct: 479 ---ECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDM---PMKPDEGIWGAL 532

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEP 633
           L AC    ++E G++   +  +F ++P
Sbjct: 533 LGACKIHNNMEIGEYV--SRYLFELQP 557



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 214/444 (48%), Gaps = 9/444 (2%)

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           T W + I      G   KAL  F ++     +PN  T   +  +CA L  L   + +H  
Sbjct: 18  TWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTH 77

Query: 323 IIRKGMGPEYD--YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
           +++    P Y   Y+  A+++ Y +CGK+ +   +   +  RNI SWN +I  +++ G  
Sbjct: 78  VVKS---PFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSL 134

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSL 439
                L + M+  G  PD+ +V     A  +  SL+    +H   I+     D  V ++ 
Sbjct: 135 DRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTW 194

Query: 440 IDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           I  YSKCG   LA ++F  IQ+  +S V WNS+I  +   G  ++A+  +  +  +  + 
Sbjct: 195 IAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKP 254

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D  T ++ + +C     L  G  +H      G   DI +   L  MY++CGD+ +A  +F
Sbjct: 255 DASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILF 314

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D MS R  VSW+AMI  Y   G+++DA  LF  M ++G KP+ VT ++++  C  +G++ 
Sbjct: 315 DGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALG 374

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
            G +  N   +  ++ D+     ++D+ ++ G +  A ++ +S+P     S W A++  C
Sbjct: 375 LGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVS-WTAMIAAC 433

Query: 678 RIHKRIDVMKTIEKELSVTGTNDN 701
            ++        +   LS +G   N
Sbjct: 434 ALNGEFREALDLFSLLSESGIEPN 457



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 207/427 (48%), Gaps = 18/427 (4%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C  L  LT    +H H++ +  + D    T +++ Y + G +  +  +FD     +
Sbjct: 58  LSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRN 117

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +      +    L+  M              + RA  S   L   + VH 
Sbjct: 118 IASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHA 177

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADV 177
             I+ G D D  +  + +  Y + G L  A+ VF   + T+R  VSW+S+IA Y      
Sbjct: 178 IGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKY 237

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + +K +  ++ +G +PD  T++SL  +C +  +L     IHGH  +     D  L N+ 
Sbjct: 238 VDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTL 297

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYS+CGD+ SA   F  +  R   SWTAMIS Y+  G    AL  F  M E  E+P++
Sbjct: 298 ISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDI 357

Query: 298 ITLITVLGSCA-----GLG-WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           +T+++++  C      GLG W+    S+H   ++K +      +  ALI+ YA+CG +++
Sbjct: 358 VTVLSLISGCGKTGALGLGHWIDNYASLH--ELKKDV-----VVCNALIDMYAKCGSLND 410

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             ++ +++  R ++SW  +I+  A  G  +EAL+L   +   G+ P++ +  + L AC +
Sbjct: 411 AREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCH 470

Query: 412 VGSLQLG 418
            G L+ G
Sbjct: 471 GGYLEKG 477



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 176/355 (49%), Gaps = 4/355 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP--DSFMW 63
           S  +LR L  +HA  + TGL  D   S   I +Y++ G L+ +++VF   ++    S  W
Sbjct: 165 SAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSW 224

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             LI CY     + +++  Y  ++ +          S+L +C     L  G  +HG   +
Sbjct: 225 NSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQ 284

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G D D  +  +++  Y   G +  A  +FD M+ R  VSW+++I+ Y +   V + L +
Sbjct: 285 LGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVL 344

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F++M   G +PD VT+LSL   CG+  +L     I  +    ++K D  + N+ I MY+K
Sbjct: 345 FNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAK 404

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG L  A   F  +  R   SWTAMI+    +G F++AL+ F  + E   EPN IT + V
Sbjct: 405 CGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAV 464

Query: 304 LGSCAGLGWLREGKSVHCQII-RKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           L +C   G+L +G+     +  R G+ P  D+    +I+     GK+ E  +VI 
Sbjct: 465 LQACCHGGYLEKGRECFMMMTERYGINPGLDHYS-CMIDLLGRKGKLIEALEVIQ 518



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 12/233 (5%)

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           ++  WNS I G    GN+ +A+ LFHQ+ LN L+ +  TF    +AC+ +  L   + +H
Sbjct: 16  TLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIH 75

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             ++      DIY+ TA+ DMY KCG +  A  +FD M  RN+ SW+AMI  +   G L+
Sbjct: 76  THVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLD 135

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACM- 641
              +LF  M   G +P+  T + +  A   + S+     +  A+   G+E  L     + 
Sbjct: 136 RVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLR----FLKAVHAIGIETGLDADTSVS 191

Query: 642 ---VDLLSRSGDIEGAFKMIHSMPFPANGSI-WGALLNGCRIH--KRIDVMKT 688
              +   S+ G+++ A  + H +   A  S+ W +L+  C  H  K +D +K+
Sbjct: 192 NTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLI-ACYAHFGKYVDAVKS 243


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 193/661 (29%), Positives = 357/661 (54%), Gaps = 18/661 (2%)

Query: 79  SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG---------EKVHGRIIKCGFDKD 129
           ++L++ ++++  A  ++  +  +++AC S     S           ++  +++K G D+ 
Sbjct: 18  ALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGIDQF 77

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             + T+++  Y + G    AR++F+ + S DVVSW+ +I  Y  +    + L++F  M+R
Sbjct: 78  LYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLR 137

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           E   P+  T+ SL  +CG        RS+H   ++  + +D  L N+   MY+KC DL +
Sbjct: 138 ESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEA 197

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           ++  F ++ ++   SW  MI  Y ++G+  KA+  F +ML+   +P+ +T++ ++ + A 
Sbjct: 198 SQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSANA- 256

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
                  ++VHC II+ G   +   +  +L+  YA+ G     + +      ++++S   
Sbjct: 257 -----VPETVHCYIIKCGFTGDASVV-TSLVCLYAKQGFTDMAKLLYECYPTKDLISLTG 310

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +IS Y+ KG  + A+E  +Q     + PD+ ++ S L    +     +G   HG+ +K  
Sbjct: 311 IISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNG 370

Query: 430 -CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              D  V + LI  YS+      A  LF    +K ++ WNSMI G  Q G S +A+ LF 
Sbjct: 371 LTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFC 430

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           QM +   + D +T  + +  C  +G L  G+ +H  ++   V+ + +  TAL DMY KCG
Sbjct: 431 QMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCG 490

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  A+++F S+++  +V+W+++I  Y ++G  + A   F ++ + G++P+++TF+ +L 
Sbjct: 491 RLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLA 550

Query: 609 ACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           AC+H G V  G  YF  MR  +G+ P LQHYAC+V LL R+G  + A ++I++M    + 
Sbjct: 551 ACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDS 610

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           ++WGALL+ C I + + + + + K L +    + G+Y  LSN+YA  G WD+  +VR +M
Sbjct: 611 AVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRWDDVARVRDMM 670

Query: 728 E 728
            
Sbjct: 671 R 671



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 277/564 (49%), Gaps = 10/564 (1%)

Query: 12  KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           ++ ++   LL  G+      +T LI+ Y ++G    +R +F+     D   W VLI  Y 
Sbjct: 61  QVNQIQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYS 120

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            +    +++ L+  M+RE    +     S+L +C        G  VH   IK G   D  
Sbjct: 121 QHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQ 180

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  ++   Y +   L+ ++ +F +M  ++V+SW+++I +Y  N    + +  F  M++EG
Sbjct: 181 LSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEG 240

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            +P  VTM++L  A           ++H ++++     D  +  S + +Y+K G    A+
Sbjct: 241 WQPSPVTMMNLMSANAV------PETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAK 294

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             +     +   S T +IS Y+  G  + A+E F++ L++  +P+ + LI+VL   +   
Sbjct: 295 LLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPS 354

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
               G + H   ++ G+  +   +   LI FY+   ++     +     E+ +++WN +I
Sbjct: 355 HFAIGCAFHGYGLKNGLTNDC-LVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMI 413

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S   + G S +A+EL  QM   G  PD+ ++AS LS C  +G L++G  +HG++++ + K
Sbjct: 414 SGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVK 473

Query: 432 -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            ++F  ++LIDMY+KCG  + A  +F  I    +V WNS+I G+   G   +A   F ++
Sbjct: 474 VEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKL 533

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
               LE D++TFL  + AC++ G +  G ++       YG+   +     +  +  + G 
Sbjct: 534 QEQGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGL 593

Query: 550 LQTAQRVFDSMSER-NVVSWSAMI 572
            + A  + ++M  R +   W A++
Sbjct: 594 FKEAIEIINNMEIRPDSAVWGALL 617


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 182/530 (34%), Positives = 305/530 (57%), Gaps = 6/530 (1%)

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
           A+ +H   +R +  +     +  I +Y+    L  A   F  +E     +W ++I C+  
Sbjct: 24  AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
              F +AL SFV+M      P+     +VL SC  +  LR G+SVH  I+R GM  +  Y
Sbjct: 83  QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL-Y 141

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
            G AL+  Y++   +    KV   +  ++++S+N +I+ YA+ GM ++AL ++ +M T  
Sbjct: 142 TGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSD 201

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLA 452
           L PD+F+++S L        +  G +IHG+VI+  ID  D ++ SSL+DMY+K      +
Sbjct: 202 LKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDS-DVYIGSSLVDMYAKSARIEDS 260

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F  + ++  + WNS++ G+ QNG   EA+ LF QM    +    V F + I AC+++
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L  GK +H  ++  G  ++I+I +AL DMY+KCG++Q A+++FD M+  + VSW+A+I
Sbjct: 321 ATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAII 380

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             + +HG  ++A SLF++M   G+KPN+V F+ +L ACSH G V+E   YFN+M +++G+
Sbjct: 381 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 440

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
             +L+HYA + DLL R+G +E A+  I  M     GS+W  LL+ C +HK +++ + + +
Sbjct: 441 NQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAE 500

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++    + + G Y L+ N+YA  G W E  K+R  +   GL+K P  S I
Sbjct: 501 KIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWI 550



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 242/468 (51%), Gaps = 7/468 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHA  + T       AS  +I  Y  +  L  + LVF T + P    W  +I+C+   +
Sbjct: 26  QLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQS 84

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F  ++  + +M        + ++PSVL++C+ + DL  GE VHG I++ G D D     
Sbjct: 85  LFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y +   +D  RKVF+ M  +DVVS++++IA Y  +    + L+M   M    ++P
Sbjct: 145 ALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKP 204

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T+ S+     E   +   + IHG+V+R+ I  D  +G+S + MY+K   +  +ER F
Sbjct: 205 DAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 264

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             + +R + SW ++++ Y ++G + +AL  F +M+  K  P  +   +V+ +CA L  L 
Sbjct: 265 SHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLH 324

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  ++R G G    ++  AL++ Y++CG +    K+   +   + +SW  +I  +
Sbjct: 325 LGKQLHGYVLRGGFGRNI-FIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGH 383

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
           A  G   EA+ L  +M+  G+ P+  +  + L+AC +VG +         + K+   ++ 
Sbjct: 384 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 443

Query: 435 VQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
           ++  +++ D+  + G    AY    +++ + +  +W++++  C  ++N
Sbjct: 444 LEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKN 491



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 216/467 (46%), Gaps = 41/467 (8%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + +SCT   +LR    +H  ++  G+  D      L+  Y+++  + S R VF+     D
Sbjct: 111 VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKD 170

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              +  +I  Y  +  +E+++ +  +M         F   SVL   S   D+  G+++HG
Sbjct: 171 VVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHG 230

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+ G D D  I +S++  Y +   ++D+ +VF  +  RD +SW+S++A Y  N   +E
Sbjct: 231 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNE 290

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  MV   V P  V   S+  AC  L +L   + +HG+VLR     +  + ++ + 
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVD 350

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG++ +A + F ++      SWTA+I  +   G   +A+  F +M     +PN + 
Sbjct: 351 MYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 410

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            + VL +C+ +G + E       + +  G+  E        +E YA    +         
Sbjct: 411 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE--------LEHYAAVADL--------- 453

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
                            R G  +EA + + +M+   + P     ++ LS+C    +L+L 
Sbjct: 454 ---------------LGRAGKLEEAYDFISKMR---VEPTGSVWSTLLSSCSVHKNLELA 495

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSV 464
            ++   +  ID ++      + +MY+  G +K +A L   R+++K +
Sbjct: 496 EKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRL-RVRKKGL 541



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 112/209 (53%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+F    ++ K   +H +++  G+  D    + L++ YA+   +  S  VF      DS
Sbjct: 213 LPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDS 272

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  L+  Y+ N  + E++ L+ +M+  +       + SV+ AC+ L  L  G+++HG 
Sbjct: 273 ISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGY 332

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ GF ++  I ++++  Y + G +  ARK+FD+M   D VSW++II  +  +    E 
Sbjct: 333 VLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEA 392

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           + +F  M R+GV+P+ V  +++  AC  +
Sbjct: 393 VSLFEEMKRQGVKPNQVAFVAVLTACSHV 421


>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
 gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
          Length = 734

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 217/721 (30%), Positives = 377/721 (52%), Gaps = 23/721 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C + R ++   RLH  L  +G          +++ YA+ G L  ++  FD   + +
Sbjct: 20  LLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKN 79

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F+W ++I  Y  +    E++ L+HKM       + FI+ S L AC+ LGDL  G ++H 
Sbjct: 80  DFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGREIHK 136

Query: 120 RIIKC-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           R+++      D V+Q S++  Y   G + +  K+FD M  +++VSW+++I+++       
Sbjct: 137 RVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPE 196

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L+++H M RE +EP+     SL  AC  L +L    SIH  +    ++ D  + N+ I
Sbjct: 197 QALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENALI 256

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKCG +  A   F  +  R   +WT+MI+ Y + G+  +A   +  M      P   
Sbjct: 257 NMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSA 316

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE-YDYLGPALIEFYAECGKMSECEKVIH 357
           T + +L +C+ L    +GK +H ++  K  G E    +  AL+  Y+ CG + + E +  
Sbjct: 317 TFVALLSACSTL---EQGKHLHEEV--KAFGFESITVVETALMFMYSRCGSLEDAEFLFA 371

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +++ +SW+ +++ +A+ G   +AL L  QM   G+     +  S+L AC      +L
Sbjct: 372 KMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRL 431

Query: 418 GLQIHGHV--IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
              I   +    ID  D  +++ L+  YSKCG    A  +F+R++ + V+ W  MI G+ 
Sbjct: 432 SKTIRELIDWSGIDKMDS-IRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYA 490

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
           Q G+S  A+ LFH+M    +E D VTF + +QACSN   LE G+ VH ++++  G +   
Sbjct: 491 QQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILAAQGGKMSD 547

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           ++   L +MYA+CG ++ A+++F+SM   + +SWSA++     HGQ +D    ++ M++ 
Sbjct: 548 FLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNE 607

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL-QHYACMVDLLSRSGDIEG 653
           G+ P+ VT + IL +CSH+G  +E   YF  +      P L +HY CMVDLL R+G ++ 
Sbjct: 608 GVVPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRLDE 667

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A ++I  +  P +      +L  C+  + +        ++  T +     + LLS IYA 
Sbjct: 668 AEELISMIDRP-DVVTLNTMLAACKNQQDLHRGARTAAQMQSTESC-AAPFVLLSQIYAG 725

Query: 714 E 714
           E
Sbjct: 726 E 726



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 177/593 (29%), Positives = 301/593 (50%), Gaps = 20/593 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L+ C S  ++  G ++H  + + G+     ++  ++  Y + GCL DA+  FD++ 
Sbjct: 17  YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            ++   W+ +I+ Y  +    E L++FH M    + P+     S   AC  L  L   R 
Sbjct: 77  DKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGRE 133

Query: 218 IHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           IH  VL    I  D  + NS + MY++CG +L   + F  + ++   SW AMIS + +  
Sbjct: 134 IHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCD 193

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + ++ALE + +M   + EPN     ++L +CA LG L  G S+H +I   G+  +   + 
Sbjct: 194 YPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDI-VME 252

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            ALI  Y++CG M E  +V   +  R++ +W  +I+ YA+ G   EA      M+   + 
Sbjct: 253 NALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVS 312

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLL 455
           P S +  + LSAC    +L+ G  +H  V     +    V+++L+ MYS+CG    A  L
Sbjct: 313 PTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFL 369

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F ++QQK  V W++M+    Q G+  +A+ LF QM L  +++   TF +A+QACS     
Sbjct: 370 FAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDS 429

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
              K +   +   G+ K   I   L   Y+KCGD++ A+++FD M  R+V++W+ MI  Y
Sbjct: 430 RLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGY 489

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE--- 632
              G    A  LF +M   G++P+ VTF ++L ACS+   +E+G+      RI   +   
Sbjct: 490 AQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVH--ARILAAQGGK 544

Query: 633 -PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
             D      ++++ +R G +  A ++  SM   +  S W A++  C  H + D
Sbjct: 545 MSDFLGNG-LINMYARCGSMRDARQIFESMDRSSRIS-WSAIMTLCARHGQHD 595



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 308/620 (49%), Gaps = 21/620 (3%)

Query: 9   NLRKLTRLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           +L +   +H  +L +  +  D      L+  YA  GS+     +FD     +   W  +I
Sbjct: 127 DLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMI 186

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             ++  ++ E+++ LYH+M RE+   + F++ S+L AC+SLG+L  G  +H RI   G  
Sbjct: 187 SAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQ 246

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D V++ +++  Y + GC+D+A +VF  + +RDV +W+S+IA Y      SE    +  M
Sbjct: 247 RDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGM 306

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            R+ V P   T ++L  AC    +L   + +H  V     +    +  + + MYS+CG L
Sbjct: 307 RRDCVSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSL 363

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             AE  F K++++   SW+AM++ + + G   KAL  F +M+    + +L T  + L +C
Sbjct: 364 EDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQAC 423

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           +     R  K++   I   G+  + D +   L+  Y++CG M E  K+   +  R++L+W
Sbjct: 424 SLKRDSRLSKTIRELIDWSGI-DKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTW 482

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
            ++I  YA++G SK ALEL  +M+  G+ PDS + +S L AC N   L+ G ++H  ++ 
Sbjct: 483 TVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILA 539

Query: 428 IDCK--DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
                  +F+ + LI+MY++CG    A  +FE + + S + W++++    ++G   + I+
Sbjct: 540 AQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIID 599

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI---YID---TA 539
            +  M    +  D VT +  + +CS+ G  ++       +IS     D    ++D     
Sbjct: 600 TYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIIS-----DFELPHLDEHYQC 654

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           + D+  + G L  A+ +   +   +VV+ + M+        L+  A    QM  +     
Sbjct: 655 MVDLLCRAGRLDEAEELISMIDRPDVVTLNTMLAACKNQQDLHRGARTAAQMQSTESCAA 714

Query: 600 EVTFMNILWACSHSGSVEEG 619
               ++ ++A  H  +   G
Sbjct: 715 PFVLLSQIYAGEHHNTPVPG 734


>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
          Length = 671

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 204/634 (32%), Positives = 329/634 (51%), Gaps = 13/634 (2%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VHG  +K G      +  ++L +Y   G L DAR VFD+M  R+VVSWS +IA+      
Sbjct: 24  VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83

Query: 177 VSEGLKMFHSMVREGVE--PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           + + L +F  M+R G    P+  T+ +L   C           +H   ++  +  D  + 
Sbjct: 84  LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC---YNRSGWFQKALESFVKMLEV 291
            + + MY+KCG + S+ R FV   +R   SWT+MI+C   +  SG+   A+  F KML +
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMS 350
           K  P   T   +L        L  GK VH  +++  MG E D  LG AL+  Y  CG M 
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVK--MGTEVDPALGTALLAMYGRCGGMD 261

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP-DSFSVASSLSAC 409
           E  ++   I   +  S   L++ YAR G + EA+ +   M   G MP D  ++ S L  C
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDM-LMGHMPIDQSAITSLLQVC 319

Query: 410 GNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            ++G L++  +IH + +K   + D  + ++++ +Y KCG    + ++F  ++ K  + W 
Sbjct: 320 SSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWT 379

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           +++  + QN  S EA+  F +M    LE       + ++ACS    L  G  +H +++  
Sbjct: 380 ALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKL 439

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
           GV  D  ++ AL  MYAKCG +Q A ++F+SM  R ++SW+A+I  +  HG    A  LF
Sbjct: 440 GVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLF 499

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSR 647
             M +  + P++ TF+ +L +CS  G V EG  YF  M+  + +EP ++HY CMVDL +R
Sbjct: 500 DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFAR 559

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
           +G    A K I +MP   +  +W ALL  CR+H  +D+ +   K++      D   Y +L
Sbjct: 560 AGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIIL 619

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           S+I+A    WDE  + R++++   L+K  G S +
Sbjct: 620 SSIHASIDMWDEKARNRTLLDFQQLRKDVGSSQL 653



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 285/574 (49%), Gaps = 12/574 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR--EQAT 92
           L+ SY   G L  +R VFD     +   W+VLI          +++ L+  M+R  E+  
Sbjct: 43  LLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDR 102

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
            ++F   +++  C+   D  +GE+VH   +K G D+D+ +  +++  Y + G +  + + 
Sbjct: 103 PNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRA 162

Query: 153 FDKMTSRDVVSWSSIIASYFDNADV---SEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           F     R V+SW+S+IA   ++ D       + +F  M+   V P   T   + +     
Sbjct: 163 FVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVP 222

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
             L   + +HG +++   ++D  LG + + MY +CG +    R   +I +    S T+++
Sbjct: 223 ELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLL 281

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y R+G   +A+  F  ML      +   + ++L  C+ LG LR  K +HC  ++    
Sbjct: 282 TAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFR 341

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   L  A++  Y +CG ++  E V + +  ++ +SW  L++ Y +  +S+EAL    +
Sbjct: 342 LDTLLLN-AIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFRE 400

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGF 448
           M   GL    F + S L AC    SL  G QIH  V+K+   D+  V+++L+ MY+KCG 
Sbjct: 401 MVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGV 460

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
             +A  +F  ++ + ++ WN++I  F Q+GN + AI LF  M    +  D+ TF+  + +
Sbjct: 461 VQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSS 520

Query: 509 CSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           CS +G + +G ++       Y +   +   T + D++A+ G    A +  D+M  + + +
Sbjct: 521 CSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQL 580

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            W A++    +HG L+      K++L+  IKP +
Sbjct: 581 VWEALLASCRVHGNLDLGRMAAKKILE--IKPED 612



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 242/471 (51%), Gaps = 8/471 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN- 73
           ++HA  +  G+  D   +  L++ YA+ G + SS   F    +     W  +I C + + 
Sbjct: 126 QVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHG 185

Query: 74  --NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
              + + +I+L+ KM+  +   +N  +  +L+       L SG++VHG ++K G + D  
Sbjct: 186 DSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPA 245

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + T++L  YG  G +D+  ++  ++   D  S +S++ +Y  N    E +++F  M+   
Sbjct: 246 LGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGH 304

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +  D   + SL + C  L  LR  + IH + L+   ++D  L N+ + +Y KCGD+ S+E
Sbjct: 305 MPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSE 364

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  +E + T SWTA+++CY ++   Q+AL  F +M+    E ++  + +VL +C+   
Sbjct: 365 IVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATS 424

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  G  +H ++++ G+  +   +  AL+  YA+CG +    K+ +++  R I+SWN LI
Sbjct: 425 SLSCGWQIHSRVVKLGVDDDTS-VENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALI 483

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDC 430
           + +++ G    A++L   MQ   + PD ++    LS+C  +G +  G +    +  K + 
Sbjct: 484 TSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNL 543

Query: 431 KDEFVQ-SSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           + +    + ++D++++ G F +    +     Q   ++W +++     +GN
Sbjct: 544 EPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGN 594



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 109/204 (53%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S   LR +  +H + L      D      ++  Y + G + SS +VF+T +  D+  W  
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTA 380

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           L+ CY+ N+  +E++  + +M+R+    S F   SVLRACS+   L  G ++H R++K G
Sbjct: 381 LLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLG 440

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D D  ++ +++  Y + G +  A K+F+ M +R ++SW+++I S+  + +    +++F 
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFD 500

Query: 186 SMVREGVEPDFVTMLSLAEACGEL 209
            M  E V PD  T + L  +C  +
Sbjct: 501 MMQEEMVCPDDYTFVGLLSSCSRM 524


>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
 gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
          Length = 721

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 204/634 (32%), Positives = 329/634 (51%), Gaps = 13/634 (2%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VHG  +K G      +  ++L +Y   G L DAR VFD+M  R+VVSWS +IA+      
Sbjct: 24  VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83

Query: 177 VSEGLKMFHSMVREGVE--PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           + + L +F  M+R G    P+  T+ +L   C           +H   ++  +  D  + 
Sbjct: 84  LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC---YNRSGWFQKALESFVKMLEV 291
            + + MY+KCG + S+ R FV   +R   SWT+MI+C   +  SG+   A+  F KML +
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMS 350
           K  P   T   +L        L  GK VH  +++  MG E D  LG AL+  Y  CG M 
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVK--MGTEVDPALGTALLAMYGRCGGMD 261

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP-DSFSVASSLSAC 409
           E  ++   I   +  S   L++ YAR G + EA+ +   M   G MP D  ++ S L  C
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDM-LMGHMPIDQSAITSLLQVC 319

Query: 410 GNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            ++G L++  +IH + +K   + D  + ++++ +Y KCG    + ++F  ++ K  + W 
Sbjct: 320 SSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWT 379

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           +++  + QN  S EA+  F +M    LE       + ++ACS    L  G  +H +++  
Sbjct: 380 ALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKL 439

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
           GV  D  ++ AL  MYAKCG +Q A ++F+SM  R ++SW+A+I  +  HG    A  LF
Sbjct: 440 GVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLF 499

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSR 647
             M +  + P++ TF+ +L +CS  G V EG  YF  M+  + +EP ++HY CMVDL +R
Sbjct: 500 DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFAR 559

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
           +G    A K I +MP   +  +W ALL  CR+H  +D+ +   K++      D   Y +L
Sbjct: 560 AGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIIL 619

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           S+I+A    WDE  + R++++   L+K  G S +
Sbjct: 620 SSIHASIDMWDEKARNRTLLDFQQLRKDVGSSQL 653



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 288/581 (49%), Gaps = 12/581 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR--EQAT 92
           L+ SY   G L  +R VFD     +   W+VLI          +++ L+  M+R  E+  
Sbjct: 43  LLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDR 102

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
            ++F   +++  C+   D  +GE+VH   +K G D+D+ +  +++  Y + G +  + + 
Sbjct: 103 PNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRA 162

Query: 153 FDKMTSRDVVSWSSIIASYFDNADV---SEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           F     R V+SW+S+IA   ++ D       + +F  M+   V P   T   + +     
Sbjct: 163 FVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVP 222

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
             L   + +HG +++   ++D  LG + + MY +CG +    R   +I +    S T+++
Sbjct: 223 ELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLL 281

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y R+G   +A+  F  ML      +   + ++L  C+ LG LR  K +HC  ++    
Sbjct: 282 TAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFR 341

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   L  A++  Y +CG ++  E V + +  ++ +SW  L++ Y +  +S+EAL    +
Sbjct: 342 LDTLLLN-AIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFRE 400

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGF 448
           M   GL    F + S L AC    SL  G QIH  V+K+   D+  V+++L+ MY+KCG 
Sbjct: 401 MVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGV 460

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
             +A  +F  ++ + ++ WN++I  F Q+GN + AI LF  M    +  D+ TF+  + +
Sbjct: 461 VQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSS 520

Query: 509 CSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           CS +G + +G ++       Y +   +   T + D++A+ G    A +  D+M  + + +
Sbjct: 521 CSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQL 580

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            W A++    +HG L+      K++L+  IKP + +   IL
Sbjct: 581 VWEALLASCRVHGNLDLGRMAAKKILE--IKPEDPSPYIIL 619



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 242/471 (51%), Gaps = 8/471 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN- 73
           ++HA  +  G+  D   +  L++ YA+ G + SS   F    +     W  +I C + + 
Sbjct: 126 QVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHG 185

Query: 74  --NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
              + + +I+L+ KM+  +   +N  +  +L+       L SG++VHG ++K G + D  
Sbjct: 186 DSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPA 245

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + T++L  YG  G +D+  ++  ++   D  S +S++ +Y  N    E +++F  M+   
Sbjct: 246 LGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGH 304

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +  D   + SL + C  L  LR  + IH + L+   ++D  L N+ + +Y KCGD+ S+E
Sbjct: 305 MPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSE 364

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  +E + T SWTA+++CY ++   Q+AL  F +M+    E ++  + +VL +C+   
Sbjct: 365 IVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATS 424

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  G  +H ++++ G+  +   +  AL+  YA+CG +    K+ +++  R I+SWN LI
Sbjct: 425 SLSCGWQIHSRVVKLGVDDDTS-VENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALI 483

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDC 430
           + +++ G    A++L   MQ   + PD ++    LS+C  +G +  G +    +  K + 
Sbjct: 484 TSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNL 543

Query: 431 KDEFVQ-SSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           + +    + ++D++++ G F +    +     Q   ++W +++     +GN
Sbjct: 544 EPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGN 594



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 109/204 (53%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S   LR +  +H + L      D      ++  Y + G + SS +VF+T +  D+  W  
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTA 380

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           L+ CY+ N+  +E++  + +M+R+    S F   SVLRACS+   L  G ++H R++K G
Sbjct: 381 LLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLG 440

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D D  ++ +++  Y + G +  A K+F+ M +R ++SW+++I S+  + +    +++F 
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFD 500

Query: 186 SMVREGVEPDFVTMLSLAEACGEL 209
            M  E V PD  T + L  +C  +
Sbjct: 501 MMQEEMVCPDDYTFVGLLSSCSRM 524


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 238/749 (31%), Positives = 380/749 (50%), Gaps = 32/749 (4%)

Query: 16  LHAHLLVTGLHY--DPPASTRLIESYAE-MGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +  H L++   Y  D      LI  Y   + S   +R VFD     +S  W  +I  Y  
Sbjct: 194 VQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSR 253

Query: 73  NNFFEESILLYHKMIREQATIS----NFIYPSVLR-ACSSLGDLG--SGEKVHGRIIKCG 125
                 +  L+  M +E    S     + + S++  ACSS+ D G    E++  R+ K G
Sbjct: 254 RGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSV-DFGLCVLEQMLARVEKSG 312

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F +D  + ++++  +  FG  DDA+ +F++M  R+VVS + ++             K+FH
Sbjct: 313 FLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFH 372

Query: 186 SMVR-EGVEPD-FVTMLSLAEACGELCSL----RPARSIHGHVLRRKIKIDG-PLGNSFI 238
            M    G+  D +V +LS   A  E   L    R  R +H HV+R  +  +   +GN  +
Sbjct: 373 EMKDLVGINSDSYVVLLS---AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 429

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G +  A   F  + ++ + SW ++IS  +++   + A ESF +M      P+  
Sbjct: 430 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNF 489

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TLI+ L SCA LGW+  G+ +HC  ++ G+  +   +  AL+  YAE G  +EC KV   
Sbjct: 490 TLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS-VSNALLALYAETGCFTECLKVFSL 548

Query: 359 IGERNILSWNMLISEYARKGMS-KEALELLVQMQT--WGLMPDSFSVASSLSACGNVGSL 415
           + E + +SWN +I   +    S  +A++  +QM    WGL   +F   + LSA  ++   
Sbjct: 549 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTF--INILSAVSSLSLH 606

Query: 416 QLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICG 473
           ++  QIH  V+K    D+  + ++L+  Y KCG  N    +F R+ + +  V WNSMI G
Sbjct: 607 EVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 666

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           +  N    +A++L   M      +D  TF T + AC+++  LE+G  VH   I   +  D
Sbjct: 667 YIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESD 726

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + + +AL DMY+KCG +  A R F+ M  RNV SW++MI  Y  HG    A  LF +M+ 
Sbjct: 727 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 786

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
            G  P+ VTF+ +L ACSH G VEEG  +F +M  ++ + P ++H++CMVDLL R+G ++
Sbjct: 787 DGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 846

Query: 653 GAFKMIHSMPFPANGSIWGALLNG-CRIHKRIDVMKTIEKELSVTGTNDNGY-YTLLSNI 710
                I+SMP   N  IW  +L   CR + R   +     E+ +     N   Y LL+N+
Sbjct: 847 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANM 906

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           YA    W++  K R+ M+   +KK  G S
Sbjct: 907 YASGEKWEDVAKARTAMKEAAVKKEAGCS 935



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 186/669 (27%), Positives = 320/669 (47%), Gaps = 26/669 (3%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           S  LI  Y  +G L S++ +FD     +   WA LI  Y  N   +E+   +  M+R   
Sbjct: 109 SNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGF 168

Query: 92  TISNFIYPSVLRACSSLGDLGS--GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD-- 147
             +++ + S LRAC   G  G   G ++HG I K  +  D V+   ++  YG   CLD  
Sbjct: 169 IPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG--SCLDSA 226

Query: 148 -DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV----EPDFVTMLSL 202
            DAR VFD +  R+ +SW+SII+ Y    D      +F SM +EG+    +P+  T  SL
Sbjct: 227 NDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSL 286

Query: 203 -AEACGE----LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
              AC      LC L     +   V +     D  + ++ +  +++ G    A+  F ++
Sbjct: 287 ITTACSSVDFGLCVL---EQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQM 343

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK--EEPNLITLITVLGSCAGL-GWLR 314
             R   S   ++    +    + A + F +M ++      + + L++     + L    R
Sbjct: 344 GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRR 403

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH  +IR G+      +G  L+  YA+ G +++   V   + E++ +SWN LIS  
Sbjct: 404 KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 463

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
            +   S++A E   +M+  G MP +F++ S+LS+C ++G + LG QIH   +K+    D 
Sbjct: 464 DQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 523

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL-EAINLFHQMYL 492
            V ++L+ +Y++ G       +F  + +   V WNS+I     +  S+ +A+  F QM  
Sbjct: 524 SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR 583

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
               +  VTF+  + A S++   E    +H  ++ Y +  D  I  AL   Y KCG++  
Sbjct: 584 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 643

Query: 553 AQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            +++F  MSE R+ VSW++MI  Y  +  L+ A  L   M+  G + +  TF  IL AC+
Sbjct: 644 CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACA 703

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
              ++E G           +E D+   + +VD+ S+ G I+ A +    MP   N   W 
Sbjct: 704 SVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL-RNVYSWN 762

Query: 672 ALLNGCRIH 680
           ++++G   H
Sbjct: 763 SMISGYARH 771



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 216/413 (52%), Gaps = 4/413 (0%)

Query: 11  RKLTRLHAHLLVTGLHYDPPA-STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           RK   +HAH++ TGL+ +  A    L+  YA+ G++  +  VF+   E DS  W  LI  
Sbjct: 403 RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISG 462

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              N   E++   +H+M R  +  SNF   S L +C+SLG +  GE++H   +K G D D
Sbjct: 463 LDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTD 522

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN-ADVSEGLKMFHSMV 188
             +  ++L  Y E GC  +  KVF  M   D VSW+S+I +  D+ A VS+ +K F  M+
Sbjct: 523 VSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMM 582

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R G     VT +++  A   L     +  IH  VL+  +  D  +GN+ +  Y KCG++ 
Sbjct: 583 RGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMN 642

Query: 249 SAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             E+ F ++ E R   SW +MIS Y  +    KA++    M++  +  +  T  T+L +C
Sbjct: 643 ECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSAC 702

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A +  L  G  VH   IR  +  +   +G AL++ Y++CG++    +    +  RN+ SW
Sbjct: 703 ASVATLERGMEVHACGIRACLESDV-VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSW 761

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           N +IS YAR G  ++AL+L  +M   G  PD  +    LSAC +VG ++ G +
Sbjct: 762 NSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE 814



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 281/598 (46%), Gaps = 32/598 (5%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
             ++H + IK GF  +  +  +++  Y   G L  A+K+FD+M++R++V+W+ +I+ Y  
Sbjct: 90  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL----CSLRPARSIHGHVLRRKIKI 229
           N    E    F  MVR G  P+     S   AC E     C L     IHG + + +   
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL--GVQIHGLISKTRYGS 207

Query: 230 DGPLGNSFIVMYSKCGDLLSAERT-FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
           D  + N  I MY  C D  +  R+ F  I  R + SW ++IS Y+R G    A + F  M
Sbjct: 208 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 267

Query: 289 ----LEVKEEPNLIT---LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
               L    +PN  T   LIT   S    G L   + +  ++ + G   +  Y+  AL+ 
Sbjct: 268 QKEGLGFSFKPNEYTFGSLITTACSSVDFG-LCVLEQMLARVEKSGFLQDL-YVSSALVS 325

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-GLMPDSF 400
            +A  G   + + +   +G RN++S N L+    ++   + A ++  +M+   G+  DS+
Sbjct: 326 GFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSY 385

Query: 401 SVASSLSACGNVGSLQ----LGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYL 454
            V   LSA      L+     G ++H HVI+    D  V   + L++MY+K G    A  
Sbjct: 386 VVL--LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 443

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +FE + +K  V WNS+I G  QN  S +A   FH+M          T ++ + +C+++G 
Sbjct: 444 VFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGW 503

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           +  G+ +H   +  G+  D+ +  AL  +YA+ G      +VF  M E + VSW+++I  
Sbjct: 504 IMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA 563

Query: 575 YG-MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
                  ++ A   F QM+  G   + VTF+NIL A S S S+ E     +A+ + + + 
Sbjct: 564 LSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVS-SLSLHEVSHQIHALVLKYCLS 622

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC----RIHKRIDVM 686
            D      ++    + G++    K+   M    +   W ++++G      +HK +D++
Sbjct: 623 DDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLV 680



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 62/99 (62%)

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E+ + +H + I YG   ++++   L ++Y + GDL +AQ++FD MS RN+V+W+ +I  Y
Sbjct: 88  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             +G+ ++A + F+ M+ +G  PN   F + L AC  SG
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 192/606 (31%), Positives = 319/606 (52%), Gaps = 8/606 (1%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           IL  Y   G L  A+ +F     R+  +W+ ++ ++      S+ L +F +M+ EGV PD
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT+ ++    G  C++    S+H   ++  +     + N+ +  Y K G L +A R F+
Sbjct: 140 RVTVTTVLNLPG--CTVP---SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++  +   ++ AM+   ++ G   +AL+ F  M          T  ++L   AG+  L  
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  VH  ++R        ++  +L++FY++C  + +  ++   + ER+ +S+N++I+ YA
Sbjct: 255 GHQVHALVLRSTSVLNV-FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA 313

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
               +   L L  +MQ  G        A+ LS  G++  + +G QIH  ++ +    E  
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++LIDMYSKCG  + A   F    +KS + W ++I G+ QNG   EA+ LF  M    
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           L  D  TF + I+A S++  +  G+ +H  LI  G +  ++  + L DMYAKCG L  A 
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           R FD M ERN +SW+A+I  Y  +G+  +A  +F+ ML  G  P+ VTF+++L ACSH+G
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
             +E   YF+ M+  + + P  +HYAC++D L R G      KM+  MPF A+  IW ++
Sbjct: 554 LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSI 613

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CRIH   ++ +    +L      D   Y +LSNIYA  G W++   V+ IM   G++
Sbjct: 614 LHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 673

Query: 734 KVPGYS 739
           K  GYS
Sbjct: 674 KESGYS 679



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 248/527 (47%), Gaps = 17/527 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   +  GL         L+++Y + G L ++R VF    + D+  +  ++        
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             +++ L+  M R     ++F + S+L   + +  L  G +VH  +++     +  +  S
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y +  CLDD R++FD+M  RD VS++ IIA+Y  N   +  L++F  M + G +  
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 196 ---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
              + TMLS+A   G L  +   + IH  ++   +  +  LGN+ I MYSKCG L +A+ 
Sbjct: 337 VLPYATMLSVA---GSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F    ++   SWTA+I+ Y ++G  ++AL+ F  M      P+  T  +++ + + L  
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  G+ +H  +IR G      + G  L++ YA+CG + E  +    + ERN +SWN +IS
Sbjct: 454 IGLGRQLHSYLIRSGYKSSV-FSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-----LGLQIHGHVIK 427
            YA  G +K A+++   M   G  PDS +  S L+AC + G          L  H + I 
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572

Query: 428 IDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
              K+ +  + +ID   + G F  +  +L E   +   ++W S++     +GN  E   +
Sbjct: 573 -PWKEHY--ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQ-ELARV 628

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
                      D   ++      +  GQ E    V   +   GVRK+
Sbjct: 629 AADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKE 675



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 230/466 (49%), Gaps = 18/466 (3%)

Query: 220 GHVLRRKIKIDG-PLGNSF-----IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           GH+ R +   D  P  N F     +  YS  GDL +A+  F+    R  T+WT M+  + 
Sbjct: 57  GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLG--SCAGLGWLREGKSVHCQIIRKGMGPE 331
            +G    AL  F  ML     P+ +T+ TVL    C          S+H   I+ G+   
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-------VPSLHPFAIKFGLD-T 168

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           + ++   L++ Y + G ++   +V   + +++ +++N ++   +++G+  +AL+L   M+
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKN 450
             G+    F+ +S L+    +  L LG Q+H  V++     + FV +SL+D YSKC   +
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
               LF+ + ++  V +N +I  +  N  +   + LF +M     +   + + T +    
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           ++  +  GK +H +L+  G+  +  +  AL DMY+KCG L  A+  F + SE++ +SW+A
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 408

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           +I  Y  +GQ  +A  LF  M  +G++P+  TF +I+ A S    +  G+   + +   G
Sbjct: 409 LITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSG 468

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            +  +   + +VD+ ++ G ++ A +    MP   N   W A+++ 
Sbjct: 469 YKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 2/195 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA L++ GL  +      LI+ Y++ G L +++  F    E  +  W  LI  Y+ N 
Sbjct: 358 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 417

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE++ L+  M R         + S+++A SSL  +G G ++H  +I+ G+ K  V   
Sbjct: 418 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGY-KSSVFSG 476

Query: 135 SILC-TYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           S+L   Y + GCLD+A + FD+M  R+ +SW+++I++Y    +    +KMF  M+  G  
Sbjct: 477 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536

Query: 194 PDFVTMLSLAEACGE 208
           PD VT LS+  AC  
Sbjct: 537 PDSVTFLSVLAACSH 551



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 4/159 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH++L+ +G      + + L++ YA+ G L  +   FD   E +S  W  +I  Y    
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ- 133
             + +I ++  M+       +  + SVL ACS  G L      +  ++K  +      + 
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG-LADECMKYFHLMKHQYSISPWKEH 577

Query: 134 -TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
              ++ T G  GC    +K+  +M  + D + W+SI+ S
Sbjct: 578 YACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 192/606 (31%), Positives = 319/606 (52%), Gaps = 8/606 (1%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           IL  Y   G L  A+ +F     R+  +W+ ++ ++      S+ L +F +M+ EGV PD
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT+ ++    G  C++    S+H   ++  +     + N+ +  Y K G L +A R F+
Sbjct: 140 RVTVTTVLNLPG--CTVP---SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++  +   ++ AM+   ++ G   +AL+ F  M          T  ++L   AG+  L  
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G  VH  ++R        ++  +L++FY++C  + +  ++   + ER+ +S+N++I+ YA
Sbjct: 255 GHQVHALVLRSTSVLNV-FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA 313

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
               +   L L  +MQ  G        A+ LS  G++  + +G QIH  ++ +    E  
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++LIDMYSKCG  + A   F    +KS + W ++I G+ QNG   EA+ LF  M    
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           L  D  TF + I+A S++  +  G+ +H  LI  G +  ++  + L DMYAKCG L  A 
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           R FD M ERN +SW+A+I  Y  +G+  +A  +F+ ML  G  P+ VTF+++L ACSH+G
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
             +E   YF+ M+  + + P  +HYAC++D L R G      KM+  MPF A+  IW ++
Sbjct: 554 LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSI 613

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CRIH   ++ +    +L      D   Y +LSNIYA  G W++   V+ IM   G++
Sbjct: 614 LHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 673

Query: 734 KVPGYS 739
           K  GYS
Sbjct: 674 KESGYS 679



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 248/527 (47%), Gaps = 17/527 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   +  GL         L+++Y + G L ++R VF    + D+  +  ++        
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             +++ L+  M R     ++F + S+L   + +  L  G +VH  +++     +  +  S
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y +  CLDD R++FD+M  RD VS++ IIA+Y  N   +  L++F  M + G +  
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 196 ---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
              + TMLS+A   G L  +   + IH  ++   +  +  LGN+ I MYSKCG L +A+ 
Sbjct: 337 VLPYATMLSVA---GSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F    ++   SWTA+I+ Y ++G  ++AL+ F  M      P+  T  +++ + + L  
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  G+ +H  +IR G      + G  L++ YA+CG + E  +    + ERN +SWN +IS
Sbjct: 454 IGLGRQLHSYLIRSGYKSSV-FSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ-----LGLQIHGHVIK 427
            YA  G +K A+++   M   G  PDS +  S L+AC + G          L  H + I 
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572

Query: 428 IDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
              K+ +  + +ID   + G F  +  +L E   +   ++W S++     +GN  E   +
Sbjct: 573 -PWKEHY--ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQ-ELARV 628

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
                      D   ++      +  GQ E    V   +   GVRK+
Sbjct: 629 AADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKE 675



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 230/466 (49%), Gaps = 18/466 (3%)

Query: 220 GHVLRRKIKIDG-PLGNSF-----IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           GH+ R +   D  P  N F     +  YS  GDL +A+  F+    R  T+WT M+  + 
Sbjct: 57  GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLG--SCAGLGWLREGKSVHCQIIRKGMGPE 331
            +G    AL  F  ML     P+ +T+ TVL    C          S+H   I+ G+   
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-------VPSLHPFAIKFGLD-T 168

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           + ++   L++ Y + G ++   +V   + +++ +++N ++   +++G+  +AL+L   M+
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKN 450
             G+    F+ +S L+    +  L LG Q+H  V++     + FV +SL+D YSKC   +
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
               LF+ + ++  V +N +I  +  N  +   + LF +M     +   + + T +    
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           ++  +  GK +H +L+  G+  +  +  AL DMY+KCG L  A+  F + SE++ +SW+A
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 408

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           +I  Y  +GQ  +A  LF  M  +G++P+  TF +I+ A S    +  G+   + +   G
Sbjct: 409 LITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSG 468

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            +  +   + +VD+ ++ G ++ A +    MP   N   W A+++ 
Sbjct: 469 YKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 2/193 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA L++ GL  +      LI+ Y++ G L +++  F    E  +  W  LI  Y+ N 
Sbjct: 358 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 417

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE++ L+  M R         + S+++A SSL  +G G ++H  +I+ G+ K  V   
Sbjct: 418 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGY-KSSVFSG 476

Query: 135 SILCT-YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           S+L   Y + GCLD+A + FD+M  R+ +SW+++I++Y    +    +KMF  M+  G  
Sbjct: 477 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536

Query: 194 PDFVTMLSLAEAC 206
           PD VT LS+  AC
Sbjct: 537 PDSVTFLSVLAAC 549



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 4/159 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH++L+ +G      + + L++ YA+ G L  +   FD   E +S  W  +I  Y    
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ- 133
             + +I ++  M+       +  + SVL ACS  G L      +  ++K  +      + 
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG-LADECMKYFHLMKHQYSISPWKEH 577

Query: 134 -TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
              ++ T G  GC    +K+  +M  + D + W+SI+ S
Sbjct: 578 YACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 196/617 (31%), Positives = 341/617 (55%), Gaps = 33/617 (5%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           ++ +D   W+S+IA      +    L  F  M    V  +  T  +L +AC  L  L P 
Sbjct: 13  ISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT--TSWTAMISCYN 273
             +H ++ R  +  D     + +  Y KCG    A + F ++ +      SWTA+IS Y+
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 274 RSGWFQKALESFVKMLEVKE-------EPNLITLITVLGSCA---GLGWLREGKSVHCQI 323
            +G   +A ++F +M  ++          ++++L  ++ +CA   G   LR G +VH  +
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSK 381
           ++ G G    +LG +++  Y+ C  +    +V + I   +R+++SWN LIS +   G ++
Sbjct: 192 VKYGFGVS-THLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAE 250

Query: 382 EAL---ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-----IDCKDE 433
            AL   E +V   T  + P+  +V + L +C  +G ++    +H ++       +  KD 
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++L+DM+++CG   LA  +F+ ++ K+VV W++MI G+ Q     EA+ LF QM + 
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 494 C------LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
                  ++ + VT ++ I ACS +G       +H   ++ G+ +D  I +AL DM AKC
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 548 GDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           GD++  ++VF  M E  R VVSWS+MI   G+HG+   A  LF +M   G +PNE+T+++
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L ACSH+G VE+GK  FN+M + +G+ P  +HYAC+VDLL R+G ++ A  +I +MP  
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
           A+ ++WG+LL  C +H    + + +EK++    +N  G++ LL+N+Y + G WD+  ++R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 725 SIMEVTGLKKVPGYSTI 741
             +  +GL+K+PG S I
Sbjct: 611 VELRRSGLRKIPGQSFI 627



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 290/594 (48%), Gaps = 34/594 (5%)

Query: 46  RSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC 105
           ++ R    +    D+F W  LI      N  + ++  + +M       +NF +P++L+AC
Sbjct: 4   KTRRWYHCSISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKAC 62

Query: 106 SSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT--SRDVVS 163
           ++L  L    +VH  + + G   D     +++  YG+ G    A +VFD+M   S DVVS
Sbjct: 63  AALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVS 122

Query: 164 WSSIIASYFDNADVSEGLKMFHSMV-------REGVEPDFVTMLSLAEACGELCS---LR 213
           W+++I++Y  N  V E  K F  M         E    D V++ +L  AC   C    LR
Sbjct: 123 WTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSWTAMISC 271
              ++HG V++    +   LGNS + MYS C D+  A R F  + IE+R   SW ++IS 
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242

Query: 272 YNRSGWFQKALESFVKMLEVKE---EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG- 327
           +  +G  ++AL +F  M+       EPN +T+I +L SCA LG +     VH  I  +  
Sbjct: 243 FTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302

Query: 328 --MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
             +  +   +  AL++ +A CG ++   ++   +  +N++ W+ +I+ Y +    +EAL 
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362

Query: 386 LLVQMQTWGLM------PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSS 438
           L  QM   G M      P++ ++ S ++AC  +G+ +    IH + +     +D  + S+
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASA 422

Query: 439 LIDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           LIDM +KCG       +F  + +  ++VV W+SMI     +G    A+ LF +M     E
Sbjct: 423 LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYE 482

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
            +E+T+++ + ACS+ G +E+GK   + +   YG+         L D+  + G L  A  
Sbjct: 483 PNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHN 542

Query: 556 VFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQM--LDSGIKPNEVTFMNI 606
           V  +M  + ++  W +++    +HG       + K++  LDS    + V   N+
Sbjct: 543 VILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANM 596



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 247/512 (48%), Gaps = 36/512 (7%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C  LR+L    ++HA+L   GL  D  ++  L+++Y + G    +  VFD   E  
Sbjct: 58  LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117

Query: 59  -DSFMWAVLIKCYMWNNFFEESILLYHKMI-------REQATISNFIYPSVLRACS---S 107
            D   W  LI  Y  N   +E+   + +M         E   +      +++ AC+    
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCG 177

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWS 165
              L  G  VHG ++K GF     +  S++  Y     +  A +VF+   +  RDVVSW+
Sbjct: 178 SNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWN 237

Query: 166 SIIASYFDNADVSEGLKMFHSMVREG---VEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           S+I+ +  N +    L+ F  MV EG   VEP+ VT+++L ++C EL  +  +  +H ++
Sbjct: 238 SLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI 297

Query: 223 LRRK----IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
             R     +  D  +  + + M+++CG+L  A   F  +E +    W+AMI+ Y +    
Sbjct: 298 SSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCP 357

Query: 279 QKALESFVKML------EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           ++AL  F +ML       V+ +PN +TL++V+ +C+ LG  R    +H   +  G+  + 
Sbjct: 358 EEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDA 417

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGE--RNILSWNMLISEYARKGMSKEALELLVQM 390
             +  ALI+  A+CG +    +V   + E  R ++SW+ +I      G  K ALEL  +M
Sbjct: 418 -RIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM 476

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGF 448
           +T G  P+  +  S LSAC + G ++ G      + K        +  + L+D+  + G 
Sbjct: 477 RTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGH 536

Query: 449 KNLAYLLFERIQQKS-VVMWNSMICGFYQNGN 479
            + A+ +   +  K+ + +W S++   + +GN
Sbjct: 537 LDEAHNVILNMPIKADLALWGSLLAACHLHGN 568


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 202/646 (31%), Positives = 353/646 (54%), Gaps = 10/646 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSR 159
           VL+ C  + D  SGE++H   +KCGFD+ +V + T+++  Y + G ++D R VF+ M  R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           +VV+W+S++  Y      S+ + +F  M  EGV P+  T  S+  A     ++   R +H
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              ++   +    + NS I MYSKCG +  A+  F ++E R   SW  +++    +    
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +AL+ F        + +  T  TV+  CA L  L   + +H  +++ G   + + +  A+
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVM-TAI 343

Query: 340 IEFYAECGKMSECEKVIHAI-GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           ++ Y++CG++ +   +   + G +N++SW  +I    +      A  L  +M+   + P+
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPN 403

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+ ++ L+A   +    L  QIH  +IK + +    V ++L+  YSK G    A  +F+
Sbjct: 404 EFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFK 459

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC-SNIGQLE 516
            I  K VV W++M+  + Q G+   A N+F +M +  ++ +E T  +AI AC S    ++
Sbjct: 460 MIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGID 519

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +G+  H   I Y  +  I + +AL  MYA+ G + +A+ VF+  ++R++VSW++MI  Y 
Sbjct: 520 QGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYA 579

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDL 635
            HG   +A   F+QM   GI+ +  TF+ ++  C+H+G V+EG+ YF++M +   + P +
Sbjct: 580 QHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTM 639

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HY+CMVDL SR+G ++    +I  MPFPA   +W  LL  CR+HK +++ K   ++L +
Sbjct: 640 EHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLL 699

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +D+  Y LLSNIYA  G W E  +VR +M+   +KK  G S I
Sbjct: 700 LEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWI 745



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 267/532 (50%), Gaps = 9/532 (1%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           T L++ Y + G +   R+VF+   + +   W  L+  Y+      + + L+ +M  E   
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
            + F + SVL A +S G +  G +VH + +K G      +  S++  Y + G +++A+ V
Sbjct: 199 PNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAV 258

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F +M +RD+VSW++++A    N    E L++FH       +    T  ++ + C  L  L
Sbjct: 259 FRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQL 318

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-KRCTTSWTAMISC 271
             AR +H  VL+     DG +  + +  YSKCG+L  A   F+ +   +   SWTAMI  
Sbjct: 319 ALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGG 378

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
             ++     A   F +M E   +PN  T  TVL +   +        +H QII+      
Sbjct: 379 CIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNY-QH 433

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G AL+  Y++ G   E   +   I  +++++W+ ++S Y++ G    A  + ++M 
Sbjct: 434 APSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMS 493

Query: 392 TWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFK 449
             G+ P+ F+++S++ AC +    +  G Q H   IK   +D   V S+L+ MY++ G  
Sbjct: 494 MQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSI 553

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A ++FER   + +V WNSMI G+ Q+G S EA++ F QM    +EMD  TFL  I  C
Sbjct: 554 DSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGC 613

Query: 510 SNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           ++ G +++G ++    ++ + +   +   + + D+Y++ G L     + + M
Sbjct: 614 THAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGM 665



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 229/475 (48%), Gaps = 22/475 (4%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+HA  +  G          LI  Y++ G +  ++ VF   +  D   W  L+   + N 
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNE 281

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ L+H      A +S   Y +V++ C++L  L    ++H  ++K GF  D  + T
Sbjct: 282 HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMT 341

Query: 135 SILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           +I+  Y + G LDDA  +F  M  S++VVSW+++I     NAD+     +F  M  + V+
Sbjct: 342 AIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVK 401

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T  ++  A   +  L P   IH  +++   +    +G + +  YSK G+   A   
Sbjct: 402 PNEFTYSTVLTA--SIPILLP--QIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSI 457

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG-LGW 312
           F  I+ +   +W+AM+SCY+++G    A   F+KM     +PN  T+ + + +CA     
Sbjct: 458 FKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAG 517

Query: 313 LREGKSVHCQIIRKGMGPEYDY-----LGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           + +G+  H   I+      Y Y     +G AL+  YA  G +     V     +R+++SW
Sbjct: 518 IDQGRQFHAISIK------YRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSW 571

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +IS YA+ G SKEAL+   QM+T G+  D  +  + +  C + G ++ G Q    ++ 
Sbjct: 572 NSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVM 631

Query: 428 IDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
                  ++  S ++D+YS+ G  +    L E +      ++W +++  C  ++N
Sbjct: 632 DHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKN 686



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 167/343 (48%), Gaps = 17/343 (4%)

Query: 351 ECEKVIHAIGERNIL-------------SWNMLISEYARKGMSK-EALELLVQMQTWGLM 396
           +C    +A G R  L             S  + I +Y R+G  + EAL+  V +   G +
Sbjct: 38  DCADTCNAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRV 97

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYL 454
             + +V+  L  CG +     G Q+H   +K   D  +  V ++L+DMY KCG      +
Sbjct: 98  QGA-AVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRV 156

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +FE + +++VV W S++ G+ Q     + + LF +M    +  +  TF + + A ++ G 
Sbjct: 157 VFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGA 216

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           ++ G+ VH + + +G R  +++  +L +MY+KCG ++ A+ VF  M  R++VSW+ ++  
Sbjct: 217 VDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAG 276

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
             ++    +A  LF     S  K ++ T+  ++  C++   +   +   + +   G   D
Sbjct: 277 LLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSD 336

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
                 ++D  S+ G+++ AF +   MP   N   W A++ GC
Sbjct: 337 GNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGC 379



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 1/195 (0%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           L ++HA ++ T   + P   T L+ SY+++G+   +  +F      D   W+ ++ CY  
Sbjct: 419 LPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQ 478

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSS-LGDLGSGEKVHGRIIKCGFDKDDV 131
               + +  ++ KM  +    + F   S + AC+S    +  G + H   IK  +     
Sbjct: 479 AGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAIC 538

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + ++++  Y   G +D AR VF++ T RD+VSW+S+I+ Y  +    E L  F  M   G
Sbjct: 539 VGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVG 598

Query: 192 VEPDFVTMLSLAEAC 206
           +E D  T L++   C
Sbjct: 599 IEMDGATFLAVIVGC 613


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/616 (30%), Positives = 339/616 (55%), Gaps = 7/616 (1%)

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +D   T  L  + +   ++DA ++FD+M   D   W+ +I  +       E ++ +  MV
Sbjct: 63  NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             GV+ D  T   + ++   + SL   + IH  V++     D  + NS I +Y K G   
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            AE+ F ++ +R   SW +MIS Y   G    +L  F +ML+   +P+  + ++ LG+C+
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +   + GK +HC  +R  +      +  ++++ Y++ G++S  E++ + + +RNI++WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302

Query: 369 MLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           ++I  YAR G   +A     +M +  GL PD  +  + L A     ++  G  IHG+ ++
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMR 358

Query: 428 IDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                  V +++LIDMY +CG    A ++F+R+ +K+V+ WNS+I  + QNG +  A+ L
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F +++ + L  D  T  + + A +    L +G+ +H  ++      +  I  +L  MYA 
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CGDL+ A++ F+ +  ++VVSW+++I  Y +HG    +  LF +M+ S + PN+ TF ++
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACS SG V+EG  YF +M R +G++P ++HY CM+DL+ R+G+   A + +  MPF  
Sbjct: 539 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVP 598

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
              IWG+LLN  R HK I + +   +++     ++ G Y LL N+YAE G W++  +++ 
Sbjct: 599 TARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKL 658

Query: 726 IMEVTGLKKVPGYSTI 741
           +ME  G+ +    ST+
Sbjct: 659 LMESKGISRTSSRSTV 674



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 171/538 (31%), Positives = 287/538 (53%), Gaps = 11/538 (2%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           + PA TR +  +A+   +  +  +FD   + D+F+W V+IK +     + E++  Y +M+
Sbjct: 63  NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
                   F YP V+++ + +  L  G+K+H  +IK GF  D  +  S++  Y + GC  
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA KVF++M  RD+VSW+S+I+ Y    D    L +F  M++ G +PD  + +S   AC 
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242

Query: 208 ELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
            + S +  + IH H +R +I+  D  +  S + MYSK G++  AER F  + +R   +W 
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            MI CY R+G    A   F KM E    +P++IT I +L + A L    EG+++H   +R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMR 358

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
           +G  P    L  ALI+ Y ECG++   E +   + E+N++SWN +I+ Y + G +  ALE
Sbjct: 359 RGFLPHM-VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYS 444
           L  ++    L+PDS ++AS L A     SL  G +IH +++K     +  + +SL+ MY+
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
            CG    A   F  I  K VV WNS+I  +  +G    ++ LF +M  + +  ++ TF +
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537

Query: 505 AIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            + ACS  G +++G W + + +   YG+   I     + D+  + G+   A+R  + M
Sbjct: 538 LLAACSISGMVDEG-WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 206/415 (49%), Gaps = 7/415 (1%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++L +  ++HA ++  G   D      LI  Y ++G    +  VF+   E D   W  +I
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y+       S++L+ +M++       F   S L ACS +     G+++H   ++   +
Sbjct: 204 SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263

Query: 128 KDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             DV + TSIL  Y ++G +  A ++F+ M  R++V+W+ +I  Y  N  V++    F  
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323

Query: 187 MVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           M  + G++PD +T ++L  A   L      R+IHG+ +RR       L  + I MY +CG
Sbjct: 324 MSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L SAE  F ++ ++   SW ++I+ Y ++G    ALE F ++ +    P+  T+ ++L 
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           + A    L EG+ +H  I++         L  +L+  YA CG + +  K  + I  ++++
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILN-SLVHMYAMCGDLEDARKCFNHILLKDVV 498

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           SWN +I  YA  G  + ++ L  +M    + P+  + AS L+AC   G +  G +
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 204/734 (27%), Positives = 370/734 (50%), Gaps = 7/734 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H+ ++ +GL  +   S  L+  Y +   +  +  VFD     D   W  ++  Y  N 
Sbjct: 79  QIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNG 138

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            + +++    +M  E    +   + +++  C+ L  L  G K+H RII  G + D ++  
Sbjct: 139 CWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGN 198

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  YG  G  DD + VF +M    V+ W+++IA    N    EGL +F  M  EGV+ 
Sbjct: 199 ALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKA 258

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + VT +S+ E C  L +++    I   +L         L  S I +Y +CG L  A+   
Sbjct: 259 NEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLL 318

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             + +R   +W AM++   ++G   +A+    +M       N +T ++VL +CA L  L 
Sbjct: 319 EHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALS 378

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ +H +++  G+      +G ++I  Y +CG+      V  A+  ++ +SWN +I+  
Sbjct: 379 QGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINAS 438

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH--GHVIKIDCKD 432
                 ++ALEL   M+  GL  + F++ S L ACG +  L+L  QIH            
Sbjct: 439 VGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNS 498

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ--NGNSLEAINLFHQM 490
             V +S+++MY++CG    A   F+ +++K +V W+ ++  + Q  +G    A   F +M
Sbjct: 499 TAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEM 558

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGD 549
               ++  EVTF++A+ AC+ +  LE G+ +H +  + G V   + +   + +MY KCG 
Sbjct: 559 EAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGS 618

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
              A+ VFD M E+ ++SW+++I  Y  +G   +A S  ++ML  G  P+  T ++IL+ 
Sbjct: 619 PSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYG 678

Query: 610 CSHSGSVEEGKFYF-NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF-PANG 667
            SH+G +E G  +F ++++  G+EP      C+VDLL+R G ++ A ++I + P   A+ 
Sbjct: 679 LSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADT 738

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
             W  LL  C+ +          + +       +G + +L+N+YA  G W +  ++R +M
Sbjct: 739 IAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMM 798

Query: 728 EVTGLKKVPGYSTI 741
           E   +KK PG S I
Sbjct: 799 ERMSVKKEPGCSWI 812



 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 179/630 (28%), Positives = 324/630 (51%), Gaps = 7/630 (1%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y +   +  + +VFD     + F W +++  Y  N  + E++ L+ +M  E       ++
Sbjct: 2   YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
              L AC++ G+L  G ++H  ++  G   + +I  S++  YG+   +  A KVFD M  
Sbjct: 62  VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           RDVVSW++++A Y  N   S+ L+    M  EGV+P+ VT +++ + C +L  L   R I
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKI 181

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  ++   ++ DG LGN+ + MY  CG     +  F ++ +     WT MI+  +++G +
Sbjct: 182 HHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQY 241

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++ L  F KM     + N +T ++++  C  L  ++EG+ +  +I+          L  +
Sbjct: 242 EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSS-TLLATS 300

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           LI  Y +CG +   + ++  + +R++++WN +++  A+ G + EA+ LL +M   G   +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
             +  S L AC N+ +L  G +IH  V+   +  ++  V +S+I MY KCG    A  +F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E + +K  V WN++I     N    +A+ LFH M L  L  +E T L+ ++AC  +  L+
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLK 480

Query: 517 KGKWVHHKLISYGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             + +H +  + G   +   +  ++ +MYA+CG L  A++ FDS+ E+ +V+WS ++  Y
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAY 540

Query: 576 GM--HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG-VE 632
                G    A   F++M   GIKP EVTF++ L AC+   ++E G+         G VE
Sbjct: 541 AQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVE 600

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
             L     ++++  + G    A  +   MP
Sbjct: 601 TSLVLGNTIINMYGKCGSPSDAKLVFDQMP 630



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 247/475 (52%), Gaps = 5/475 (1%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KC  +  A   F  I  +   SWT M++ Y+++G +++ALE F +M      P+ + 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +  L +CA  G L  G+ +H  ++  G+      +  +L+  Y +C  +   EKV   +
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNI-IISNSLVNMYGKCQDVPCAEKVFDGM 119

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+++SW  +++ YA+ G   +ALE L +M   G+ P+  +  + +  C  +  L LG 
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           +IH  +I    + D  + ++L+ MY  CG  +    +F R+ Q SV++W +MI G  QNG
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              E + +F +M L  ++ +EVT+++ ++ C N+  +++G+ +  +++         + T
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           +L  +Y +CG L  A+ + + M +R+VV+W+AM+     +G   +A  L ++M   G   
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFG-VEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N+VT++++L AC++  ++ +G+     + + G ++ ++     ++ +  + G  E A  +
Sbjct: 360 NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
             +MP   + S W A++N    + +      +   + + G   N  +TLLS + A
Sbjct: 420 FEAMPRKDDVS-WNAVINASVGNSKFQDALELFHGMELEGLRSN-EFTLLSLLEA 472


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 181/558 (32%), Positives = 317/558 (56%), Gaps = 8/558 (1%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G+  D   + SL  AC +L +L   R +H H++    + D PL  + + MY+KCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  A+R F  +E +   +W+++IS Y R+G  + A+  + +M+    EPN++T    LG 
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA +  L +G+++H +I+   + P+ D L  +L+  Y +C +M E  KV   +  RN+ S
Sbjct: 121 CASVAGLADGRAIHQRILASKV-PQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179

Query: 367 WNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           +  +IS Y + G   EALEL  +M +   + P++++ A+ L A   +G+L+ G ++H H+
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239

Query: 426 IKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
                  +  VQ++L+ MY KCG    A  +F+ +  ++V+ W SMI  + Q+GN  EA+
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
           NLF +M    +E   V+F +A+ AC+ +G L++G+ +HH+++   +     ++T+L  MY
Sbjct: 300 NLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMY 355

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           A+CG L  A+RVF+ M  R+  S +AMI  +  HG+   A  ++++M   GI  + +TF+
Sbjct: 356 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFV 415

Query: 605 NILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           ++L ACSH+  V + + +F ++ +  GV P ++HY CMVD+L RSG +  A +++ +MP+
Sbjct: 416 SVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPY 475

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
             +   W  LL+GC+ H  ++  +   +++      +   Y  LSN+YA    +D+  +V
Sbjct: 476 QTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRV 535

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R  ME  G+      S I
Sbjct: 536 RKEMEERGVTTPVAVSYI 553



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 280/523 (53%), Gaps = 12/523 (2%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            FI  S++ AC+ L  L  G ++H  +I  GF  D  ++T++L  Y + G LDDA++VF+
Sbjct: 10  KFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFE 69

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  +D+ +WSSII++Y         + ++  M+ EGVEP+ VT       C  +  L  
Sbjct: 70  GMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLAD 129

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            R+IH  +L  K+  D  L +S + MY KC +++ A + F  ++ R   S+TAMIS Y +
Sbjct: 130 GRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQ 189

Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +G   +ALE F +M +V+  EPN  T  T+LG+  GLG L +G+ VH  +  +G      
Sbjct: 190 AGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV- 248

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL+  Y +CG   E  KV  ++  RN++SW  +I+ YA+ G  +EAL L  +M   
Sbjct: 249 VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD-- 306

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
            + P   S +S+L+AC  +G+L  G +IH  V++       +++SL+ MY++CG  + A 
Sbjct: 307 -VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYARCGSLDDAR 365

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F R++ +     N+MI  F Q+G   +A+ ++ +M    +  D +TF++ + ACS+  
Sbjct: 366 RVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTS 425

Query: 514 QLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAM 571
            +   +     L+  +GV   +     + D+  + G L  A+ + ++M  + + V+W  +
Sbjct: 426 LVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTL 485

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEV---TFMNILWACS 611
           +     HG LN      +++ +  + P E     F++ ++A +
Sbjct: 486 LSGCKRHGDLNRGERAARKVFE--LAPAETLPYVFLSNMYAAA 526



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/575 (28%), Positives = 283/575 (49%), Gaps = 46/575 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +CT L+ L    RLH HL++TG   D P  T L++ YA+ GSL  ++ VF+  +  D
Sbjct: 16  LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W+ +I  Y      E +++LY +MI E    +   +   L  C+S+  L  G  +H 
Sbjct: 76  LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 135

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI+     +DDV+Q S+L  Y +   + +ARKVF+ M +R+V S++++I++Y    + +E
Sbjct: 136 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 195

Query: 180 GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L++F  M + E +EP+  T  ++  A   L +L   R +H H+  R    +  + N+ +
Sbjct: 196 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 255

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG  + A + F  +  R   SWT+MI+ Y + G  Q+AL  F +M     EP+ +
Sbjct: 256 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGV 312

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMG-PEYDYLGPALIEFYAECGKMSECEKVIH 357
           +  + L +CA LG L EG+ +H +++   +  P+ +    +L+  YA CG + +  +V +
Sbjct: 313 SFSSALNACALLGALDEGREIHHRVVEAHLASPQME---TSLLSMYARCGSLDDARRVFN 369

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  R+  S N +I+ + + G  K+AL +  +M+  G+  D  +  S L AC +      
Sbjct: 370 RMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTS---- 425

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
                   +  DC+D F QS ++D     G   L            V  +  M+    ++
Sbjct: 426 --------LVADCRD-FFQSLVMDH----GVVPL------------VEHYLCMVDVLGRS 460

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI-YI 536
           G   +A  L   M     + D V ++T +  C   G L +G+    K+      + + Y+
Sbjct: 461 GRLGDAEELVETM---PYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYV 517

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
              L++MYA       A+RV   M ER V +  A+
Sbjct: 518 --FLSNMYAAAKRFDDARRVRKEMEERGVTTPVAV 550


>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 195/628 (31%), Positives = 337/628 (53%), Gaps = 13/628 (2%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDDVIQTSILCT-YGEFGCLDDAR 150
           + +F     L+ C + GD   G  VHG +++  G  + D+   ++L   YG+ G L  AR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACG 207
           ++FD+M  R++VS+ +++ ++    D      +F  +  EG E +     TML LA A  
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA-- 174

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            + +   A  +H    +     +  +G+  I  YS C  +  AE  F  I ++    WTA
Sbjct: 175 -MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-CQIIRK 326
           M+SCY+ +   + A   F KM     +PN   L +VL +   L  +  GK +H C I  K
Sbjct: 234 MVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAI--K 291

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
            +     ++G AL++ YA+CG + +       I   +++  + +IS YA+   +++A EL
Sbjct: 292 TLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 351

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
            +++    ++P+ +S++S L AC N+  L  G QIH H IKI  + D FV ++L+D Y+K
Sbjct: 352 FLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAK 411

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C   + +  +F  ++  + V WN+++ GF Q+G   EA+++F +M    +   +VT+ + 
Sbjct: 412 CNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSV 471

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++AC++   +     +H  +       D  I  +L D YAKCG ++ A +VF  + ER++
Sbjct: 472 LRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 531

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW+A+I  Y +HGQ  DA  LF +M  S ++ N++TF+ +L  CS +G V  G   F++
Sbjct: 532 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591

Query: 626 MRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           MRI  G++P ++HY C+V LL R+G +  A + I  +P   +  +W ALL+ C IHK + 
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 651

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYA 712
           + +   +++      D   Y LLSN+YA
Sbjct: 652 LGRFSAEKILEIEPQDETTYVLLSNMYA 679



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 288/569 (50%), Gaps = 8/569 (1%)

Query: 16  LHAHLLVTGL--HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +H H++  G     D   +  L+  Y ++G L S+R +FD   E +   +  L++ +   
Sbjct: 81  VHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQR 140

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             FE +  L+ ++  E   ++ F+  ++L+   ++   G    VH    K G D +  + 
Sbjct: 141 GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVG 200

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           + ++  Y     + DA  VF+ +  +D V W+++++ Y +N       ++F  M   G +
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCK 260

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+   + S+ +A   L S+   + IHG  ++     +  +G + + MY+KCGD+  A   
Sbjct: 261 PNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLA 320

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I        + MIS Y +S   ++A E F++++     PN  +L +VL +C  +  L
Sbjct: 321 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 380

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
             GK +H   I+  +G E D ++G AL++FYA+C  M    K+  ++ + N +SWN ++ 
Sbjct: 381 DFGKQIHNHAIK--IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVV 438

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            +++ G+ +EAL +  +MQ   +     + +S L AC +  S++   QIH  + K     
Sbjct: 439 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN 498

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  + +SLID Y+KCG+   A  +F+ + ++ ++ WN++I G+  +G + +A+ LF +M 
Sbjct: 499 DTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN 558

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDL 550
            + +E +++TF+  +  CS+ G +  G  +   + I +G++  +   T +  +  + G L
Sbjct: 559 KSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRL 618

Query: 551 QTA-QRVFDSMSERNVVSWSAMIDCYGMH 578
             A Q + D  S  + + W A++    +H
Sbjct: 619 NDALQFIGDIPSAPSAMVWRALLSSCIIH 647



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 110/207 (53%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CTN+ +L    ++H H +  G   D      L++ YA+   + SS  +F + ++ +
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 429

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  +  +   EE++ ++ +M   Q   +   Y SVLRAC+S   +    ++H 
Sbjct: 430 EVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 489

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K  F+ D VI  S++ TY + G + DA KVF  +  RD++SW++II+ Y  +   ++
Sbjct: 490 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 549

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            L++F  M +  VE + +T ++L   C
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVC 576



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 5/183 (2%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C +   +R   ++H  +  +  + D      LI++YA+ G +R +  VF    E D
Sbjct: 471 VLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERD 530

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y  +    +++ L+ +M +     ++  + ++L  CSS G +  G  +  
Sbjct: 531 IISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFD 590

Query: 120 RI-IKCGFDKDDVIQTSILCTYGEFGCLDDARK-VFDKMTSRDVVSWSSIIASYFDNADV 177
            + I  G        T I+   G  G L+DA + + D  ++   + W ++++S   + +V
Sbjct: 591 SMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV 650

Query: 178 SEG 180
           + G
Sbjct: 651 ALG 653


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 188/579 (32%), Positives = 319/579 (55%), Gaps = 41/579 (7%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM--YSKCGDLLSAERTFVKI 257
           +SL E C    SLR  +  HGH++R     D    +    M   S    L  A + F +I
Sbjct: 34  ISLIERC---VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREG 316
            K  + +W  +I  Y        ++ +F+ M+ E +  PN  T   ++ + A +  L  G
Sbjct: 91  PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           +S+H   ++  +G +  ++  +LI  Y  CG +    KV   I E++++SWN +I+ + +
Sbjct: 151 QSLHGMAVKSAVGSDV-FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-V 435
           KG   +ALEL  +M++  +     ++   LSAC  + +L+ G Q+  ++ +        +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQ-------------------------------QKSV 464
            ++++DMY+KCG    A  LF+ ++                               QK +
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           V WN++I  + QNG   EA+ +FH++ L   ++++++T ++ + AC+ +G LE G+W+H 
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
            +  +G+R + ++ +AL  MY+KCGDL+ ++ VF+S+ +R+V  WSAMI    MHG  N+
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMV 642
           A  +F +M ++ +KPN VTF N+  ACSH+G V+E +  F+ M   +G+ P+ +HYAC+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           D+L RSG +E A K I +MP P + S+WGALL  C+IH  +++ +     L      ++G
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + LLSNIYA+ G W+   ++R  M VTGLKK PG S+I
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 253/521 (48%), Gaps = 43/521 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRL--IESYAEMGSLRSSRLVFDTFKEPDS 60
           L   C +LR+L + H H++ TG   DP ++++L  + + +   SL  +R VFD   +P+S
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
           F W  LI+ Y        SI  +  M+ E     N + +P +++A + +  L  G+ +HG
Sbjct: 96  FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K     D  +  S++  Y   G LD A KVF  +  +DVVSW+S+I  +       +
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M  E V+   VTM+ +  AC ++ +L   R +  ++   ++ ++  L N+ + 
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWT-------------------------------AM 268
           MY+KCG +  A+R F  +E++   +WT                               A+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335

Query: 269 ISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           IS Y ++G   +AL  F ++ L+   + N ITL++ L +CA +G L  G+ +H  I + G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +   + ++  ALI  Y++CG + +  +V +++ +R++  W+ +I   A  G   EA+++ 
Sbjct: 396 IRMNF-HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID---CKDEFVQSSLIDMYS 444
            +MQ   + P+  +  +   AC + G +     +  H ++ +     +E   + ++D+  
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF-HQMESNYGIVPEEKHYACIVDVLG 513

Query: 445 KCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNGNSLE 482
           + G+   A    E +    S  +W +++  C  + N N  E
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 177/496 (35%), Positives = 294/496 (59%), Gaps = 12/496 (2%)

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           ++K    SW ++I+   RSG   +AL +F  M ++  +PN  T    + SC+ L  L  G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           +  H Q +  G  P+  ++  AL++ Y++CG++ +   +   I  RNI+SW  +I+ Y +
Sbjct: 172 RQAHQQALIFGFEPDL-FVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 230

Query: 377 KGMSKEAL----ELLVQMQ----TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
              +  AL    E LV+         +  D  ++ S LSAC  V    +   +HG +IK 
Sbjct: 231 NDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKR 290

Query: 429 DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
             + +  V+++L+D Y+KCG   ++  +F+ + ++ V+ WNS+I  + QNG S E++ +F
Sbjct: 291 GFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIF 350

Query: 488 HQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           H+M  +  +  + VT    + AC++ G    GK +H ++I  G+  ++++ T++ DMY K
Sbjct: 351 HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK 410

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG ++ A++ FD M E+NV SWSAM+  YGMHG   +A  +F +M  +G+KPN +TF+++
Sbjct: 411 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV 470

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSH+G +EEG  +F AM   F VEP ++HY CMVDLL R+G ++ AF +I  M    
Sbjct: 471 LAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRP 530

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           +  +WGALL  CR+HK +D+ +   ++L      + GYY LLSNIYA+ G W++  ++R 
Sbjct: 531 DFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRI 590

Query: 726 IMEVTGLKKVPGYSTI 741
           +M+ +GL K PG+S +
Sbjct: 591 LMKNSGLVKPPGFSLV 606



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 273/520 (52%), Gaps = 52/520 (10%)

Query: 152 VFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           +F+K   + +V SW+S+IA    + D  E L+ F SM +  ++P+  T     ++C  L 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            L   R  H   L    + D  + ++ + MYSKCG+L  A   F +I  R   SWT+MI+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 271 CYNRSGWFQKALESFVKML----------EVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
            Y ++    +AL  F + L          EV  +P  I +++VL +C+ +      + VH
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKSITEGVH 284

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
             +I++G   +   +   L++ YA+CG++    +V   + ER+++SWN +I+ YA+ GMS
Sbjct: 285 GFLIKRGFEGDLG-VENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMS 343

Query: 381 KEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSS 438
            E++E+  +M   G +  ++ ++++ L AC + GS +LG  IH  VIK+  +   FV +S
Sbjct: 344 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 403

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           +IDMY KCG   +A   F+R+++K+V  W++M+ G+  +G++ EA+ +F++M +  ++ +
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 463

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
            +TF++ + ACS+ G LE+G W   K +S+                            FD
Sbjct: 464 YITFVSVLAACSHAGLLEEG-WHWFKAMSHE---------------------------FD 495

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
              E  V  +  M+D  G  G L +A  L K M    ++P+ V +  +L AC    +V+ 
Sbjct: 496 --VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM---KLRPDFVVWGALLGACRMHKNVDL 550

Query: 619 GKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGAFKM 657
           G+   +A ++F ++P +  +Y  + ++ + +G  E   +M
Sbjct: 551 GE--ISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERM 588



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 234/451 (51%), Gaps = 19/451 (4%)

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           F W  +I     +    E++  +  M +     +   +P  +++CS+L DL SG + H +
Sbjct: 118 FSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQ 177

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +  GF+ D  + ++++  Y + G L DAR +FD+++ R++VSW+S+I  Y  N D    
Sbjct: 178 ALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRA 237

Query: 181 LKMFHSMVRE--GVEP------DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           L +F   + E  G E       D + M+S+  AC  +        +HG +++R  + D  
Sbjct: 238 LLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLG 297

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + N+ +  Y+KCG+L  + R F  + +R   SW ++I+ Y ++G   +++E F +M++  
Sbjct: 298 VENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDG 357

Query: 293 E-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           E   N +TL  VL +CA  G  R GK +H Q+I+ G+     ++G ++I+ Y +CGK+  
Sbjct: 358 EINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV-FVGTSIIDMYCKCGKVEM 416

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             K    + E+N+ SW+ +++ Y   G +KEALE+  +M   G+ P+  +  S L+AC +
Sbjct: 417 ARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSH 476

Query: 412 VGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMW 467
            G L+ G    +   H   ++   E     ++D+  + G+   A+ L + ++ +   V+W
Sbjct: 477 AGLLEEGWHWFKAMSHEFDVEPGVEHY-GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVW 535

Query: 468 NSMI--CGFYQNGN--SLEAINLFHQMYLNC 494
            +++  C  ++N +   + A  LF     NC
Sbjct: 536 GALLGACRMHKNVDLGEISARKLFELDPKNC 566



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 230/477 (48%), Gaps = 53/477 (11%)

Query: 5   RSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           +SC+ L  L    + H   L+ G   D   S+ L++ Y++ G LR +R +FD     +  
Sbjct: 160 KSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIV 219

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQA--------TISNFIYPSVLRACSSLGDLGS 113
            W  +I  Y+ N+    ++LL+ + + E++         +      SVL ACS + +   
Sbjct: 220 SWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSI 279

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
            E VHG +IK GF+ D  ++ +++  Y + G L  +R+VFD M  RDV+SW+SIIA Y  
Sbjct: 280 TEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQ 339

Query: 174 NADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           N   +E +++FH MV++G +  + VT+ ++  AC    S R  + IH  V++  ++ +  
Sbjct: 340 NGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVF 399

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +G S I MY KCG +  A + F ++ ++   SW+AM++ Y   G  ++ALE F +M    
Sbjct: 400 VGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG 459

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            +PN IT ++VL +C+  G L EG         K M  E+D                   
Sbjct: 460 VKPNYITFVSVLAACSHAGLLEEGWHWF-----KAMSHEFDV------------------ 496

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
                   E  +  +  ++    R G  KEA +L+  M+   L PD     + L AC   
Sbjct: 497 --------EPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK---LRPDFVVWGALLGACRMH 545

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
            ++ LG      + ++D K+      L ++Y+  G        +E +++  ++M NS
Sbjct: 546 KNVDLGEISARKLFELDPKNCGYYVLLSNIYADAG-------RWEDVERMRILMKNS 595



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 12/212 (5%)

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           NL  L  + + + +V  WNS+I    ++G+S+EA+  F  M    L+ +  TF  AI++C
Sbjct: 103 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           S +  L  G+  H + + +G   D+++ +AL DMY+KCG+L+ A+ +FD +S RN+VSW+
Sbjct: 163 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222

Query: 570 AMIDCYGMHGQLNDAASLFKQML--------DSGIKPNEVTFMNILWACSH--SGSVEEG 619
           +MI  Y  +   + A  LFK+ L        D  +  + +  +++L ACS     S+ EG
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
              F   R  G E DL     ++D  ++ G++
Sbjct: 283 VHGFLIKR--GFEGDLGVENTLMDAYAKCGEL 312


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 194/594 (32%), Positives = 309/594 (52%), Gaps = 75/594 (12%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK- 259
           S+ + C  L SL   + +H  +    + +D  LG   +  Y+ CGDL    R F  +EK 
Sbjct: 104 SVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKK 163

Query: 260 --------------------------------------------------RCTTSWTAMI 269
                                                             R   SW +MI
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           S Y  +G  ++ L  + +M+ +  + +L T+I+VL  CA  G L  GK+VH   I+    
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
              ++    L++ Y++CG +    +V   +GERN++SW  +I+ Y R G S  A+ LL Q
Sbjct: 284 RRINF-SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQ 342

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGF 448
           M+  G+  D  ++ S L AC   GSL  G  +H ++   +   + FV ++L+DMY+KCG 
Sbjct: 343 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGS 402

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  +F  +  K ++ WN+M+                       L+ D  T    + A
Sbjct: 403 MEGANSVFSTMVVKDIISWNTMV---------------------GELKPDSRTMACILPA 441

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+++  LE+GK +H  ++  G   D ++  AL D+Y KCG L  A+ +FD +  +++VSW
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 501

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMR 627
           + MI  YGMHG  N+A + F +M D+GI+P+EV+F++IL+ACSHSG +E+G +F++    
Sbjct: 502 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 561

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            F +EP L+HYACMVDLLSR+G++  A+K I ++P   + +IWGALL GCRI+  I++ +
Sbjct: 562 DFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAE 621

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + + +      + GYY LL+NIYAE    +E  ++R  +   GL+K PG S I
Sbjct: 622 KVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWI 675



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/578 (28%), Positives = 274/578 (47%), Gaps = 90/578 (15%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C  L+ LT   ++H+ +    +  D     +L+  YA  G L+  R VFDT ++ + ++W
Sbjct: 109 CAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLW 168

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
                     NF          M+ E A I +F                           
Sbjct: 169 ----------NF----------MVSEYAKIGDF--------------------------- 181

Query: 124 CGFDKDDVIQTSILCTYG-EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
               K+ +    I+   G E    + A ++FDK+  RDV+SW+S+I+ Y  N     GL 
Sbjct: 182 ----KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           ++  M+  G++ D  T++S+   C    +L   +++H   ++   +      N+ + MYS
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYS 297

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGDL  A R F K+ +R   SWT+MI+ Y R GW   A+    +M +   + +++ + +
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITS 357

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +CA  G L  GK VH  I    M     ++  AL++ YA+CG M     V   +  +
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMASNL-FVCNALMDMYAKCGSMEGANSVFSTMVVK 416

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +I+SWN ++ E                     L PDS ++A  L AC ++ +L+ G +IH
Sbjct: 417 DIISWNTMVGE---------------------LKPDSRTMACILPACASLSALERGKEIH 455

Query: 423 GHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G++++     D  V ++L+D+Y KCG   LA LLF+ I  K +V W  MI G+  +G   
Sbjct: 456 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGN 515

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL- 540
           EAI  F++M    +E DEV+F++ + ACS+ G LE+G W       Y ++ D  I+  L 
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG-WRFF----YIMKNDFNIEPKLE 570

Query: 541 -----TDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
                 D+ ++ G+L  A +  +++    +   W A++
Sbjct: 571 HYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 215/471 (45%), Gaps = 77/471 (16%)

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
            T + A I  + + G  + A+E  V M + K E    T  +VL  CAGL  L +GK VH 
Sbjct: 66  VTDYNAKILHFCQLGDLENAME-LVCMCQ-KSELETKTYGSVLQLCAGLKSLTDGKKVHS 123

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR----- 376
            I    +G + + LG  L+ FYA CG + E  +V   + ++N+  WN ++SEYA+     
Sbjct: 124 IIKSNSVGVD-EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182

Query: 377 ----------------------------------------------KGMSKEALELLVQM 390
                                                          G+++  L +  QM
Sbjct: 183 ESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFK 449
              G+  D  ++ S L  C N G+L LG  +H   IK   +      ++L+DMYSKCG  
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A  +FE++ +++VV W SMI G+ ++G S  AI L  QM    +++D V   + + AC
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHAC 362

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +  G L+ GK VH  + +  +  ++++  AL DMYAKCG ++ A  VF +M  ++++SW+
Sbjct: 363 ARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWN 422

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
            M+      G+L               KP+  T   IL AC+   ++E GK     +   
Sbjct: 423 TMV------GEL---------------KPDSRTMACILPACASLSALERGKEIHGYILRN 461

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           G   D      +VDL  + G + G  +++  M    +   W  ++ G  +H
Sbjct: 462 GYSSDRHVANALVDLYVKCG-VLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 52/114 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   S + L +   +H ++L  G   D   +  L++ Y + G L  +RL+FD     D 
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W V+I  Y  + +  E+I  +++M           + S+L ACS  G L  G
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 200/653 (30%), Positives = 331/653 (50%), Gaps = 29/653 (4%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD-------VIQTSILCTYGEFGCLDDAR 150
           Y +++ ACS L  L  G +VH  ++       D       V+   ++  YG         
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
                   R+ VSW+S+IA++  N    + L +F SM+R G   D   + S   AC EL 
Sbjct: 98  --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            +   R +H H L+ +   D  + N+ + MYSK G +      F +I+ +   SW ++I+
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209

Query: 271 CYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
            + + G+  +AL+ F +M+ E    PN     +   +C  +G    G+ +H   I+  + 
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  Y+G +L + YA C  +       + I   +++SWN +++ Y+ +G+  EAL L  +
Sbjct: 270 RDL-YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 328

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+  GL PD  +V   L AC    +L  G  IH +++K+    D  V +SL+ MY++C  
Sbjct: 329 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 388

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + A  +F  I+ + VV WNS++    Q+ +  E + LF  +  +   +D ++    + A
Sbjct: 389 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 448

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVS 567
            + +G  E  K VH      G+  D  +   L D YAKCG L  A R+F+ M + R+V S
Sbjct: 449 SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 508

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           WS++I  Y   G   +A  LF +M   GI+PN VTF+ +L ACS  G V EG +Y++ M 
Sbjct: 509 WSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIME 568

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             +G+ P  +H +C+VDLL+R+G +  A   I  MPF  +  +W  LL   ++H  +++ 
Sbjct: 569 PEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMG 628

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           K   + +     + +  Y LL NIYA  GNW+EF +++  M  +G+KK PG S
Sbjct: 629 KRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKS 681



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 175/642 (27%), Positives = 313/642 (48%), Gaps = 28/642 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C+ LR L    R+H HL+ +        S+   ++     ++  + L+    + P 
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVAS--------SSSSPDAQLAGNTVLGNHLITMYGRNPV 101

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  WA +I  ++ N    +++ L+  M+R       F   S +RAC+ LGD+G+G +VH 
Sbjct: 102 S--WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHA 159

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K     D ++Q +++  Y + G +DD   +F+++  +D++SW SIIA +       E
Sbjct: 160 HALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEME 219

Query: 180 GLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L++F  M+ EG   P+     S   ACG + S      IHG  ++ ++  D  +G S  
Sbjct: 220 ALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLS 279

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY++C +L SA   F +IE     SW ++++ Y+  G   +AL  F +M +    P+ I
Sbjct: 280 DMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGI 339

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+  +L +C G   L  G+ +H  +++ G+  +      +L+  YA C  +S    V H 
Sbjct: 340 TVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN-SLLSMYARCSDLSSAMDVFHE 398

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I ++++++WN +++  A+    +E L+L   +       D  S+ + LSA   +G  ++ 
Sbjct: 399 IKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMV 458

Query: 419 LQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGFYQ 476
            Q+H +  K     D  + ++LID Y+KCG  + A  LFE +   + V  W+S+I G+ Q
Sbjct: 459 KQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQ 518

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIY 535
            G + EA +LF +M    +  + VTF+  + ACS +G + +G + +  +   YG+     
Sbjct: 519 FGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTRE 578

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
             + + D+ A+ G L  A    D M  E +++ W  ++    MH  +       + +L+ 
Sbjct: 579 HCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILN- 637

Query: 595 GIKPNE----VTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
            I P+     V   NI  A   SG+  E      AMR  GV+
Sbjct: 638 -IDPSHSAAYVLLCNIYAA---SGNWNEFARLKKAMRTSGVK 675


>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 558

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 190/537 (35%), Positives = 301/537 (56%), Gaps = 8/537 (1%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE--KRCTTSWTAM 268
           +L   + +H  V+    + +  LG+S    Y +   L  A  +F +I   KR   SW  +
Sbjct: 19  TLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKRNRHSWNTI 78

Query: 269 ISCYNRSG--WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           +S Y++S   ++   L  + +M    +  +   L+  + +C GLG L  G  +H   ++ 
Sbjct: 79  LSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHGLAMKN 138

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G+  + DY+ P+L+E YA+ G M   +KV   +  RN + W +L+  Y +     E   L
Sbjct: 139 GLDKD-DYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSEVFRL 197

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYS 444
              M+  GL  D+ ++   + ACGNV + + G  +HG  I+    D+  ++++S+IDMY 
Sbjct: 198 FYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEASIIDMYV 257

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KC   + A  LFE   +++VVMW ++I GF +   ++EAI+LF QM    +  +  T   
Sbjct: 258 KCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAA 317

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + +CS++G L  GK VH  +I  G+  D    T+  D YA+CG++Q A++VFD M +RN
Sbjct: 318 ILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRN 377

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           V+SWS+MI+ +G++G   +A   F  M    + PN VTF+++L ACSHSG+V+EG   F 
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFE 437

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           +M R +G+ P+ +HYACMVDLL R+G+I  A   I +MP     S WGALL+ CRIHK +
Sbjct: 438 SMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEV 497

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
           D+   I ++L     +++  Y LLSNIYA+ G W+    VR  M + G +K  G S 
Sbjct: 498 DLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKMGIKGYRKPMGLSA 554



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 223/424 (52%), Gaps = 8/424 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK--EP 58
           + +      L    ++HA +++ G   +    + L  +Y +   L  +   FD     + 
Sbjct: 11  LSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKR 70

Query: 59  DSFMWAVLIKCYMWNN--FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           +   W  ++  Y  +   ++ + +LLY++M R    + +F     ++AC  LG L +G  
Sbjct: 71  NRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGML 130

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +HG  +K G DKDD +  S++  Y +FG ++ A+KVFD+M  R+ V W  ++  Y   + 
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSK 190

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGN 235
            SE  ++F+ M   G+  D +T++ L +ACG + + +  + +HG  +RR  I   G L  
Sbjct: 191 DSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEA 250

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S I MY KC  L +A + F    +R    WT +IS + +     +A++ F +ML     P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILP 310

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG-PALIEFYAECGKMSECEK 354
           N  TL  +L SC+ LG LR GKSVH  +IR G+  E D +   + I+ YA CG +    K
Sbjct: 311 NHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI--EMDAVNFTSFIDTYARCGNIQMARK 368

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V   + +RN++SW+ +I+ +   G+ +EAL+    M++  L+P+S +  S LSAC + G+
Sbjct: 369 VFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGN 428

Query: 415 LQLG 418
           ++ G
Sbjct: 429 VKEG 432



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 267/516 (51%), Gaps = 11/516 (2%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-- 157
           ++L   S    L   ++VH ++I  GF  + V+ +S+   Y +   LD A   FD++   
Sbjct: 9   ALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCW 68

Query: 158 SRDVVSWSSIIASYFDNADV--SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
            R+  SW++I++ Y  +     S+ L +++ M R     D   ++   +AC  L  L   
Sbjct: 69  KRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             IHG  ++  +  D  +  S + MY++ G + SA++ F ++  R +  W  ++  Y + 
Sbjct: 129 MLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKY 188

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
               +    F  M +     + +TLI ++ +C  +   +EGK VH   IR+    +  YL
Sbjct: 189 SKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYL 248

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ++I+ Y +C  +    K+     ERN++ W  LIS +A+   + EA++L  QM    +
Sbjct: 249 EASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESI 308

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYL 454
           +P+  ++A+ L +C ++GSL+ G  +HG++I+   + + V  +S ID Y++CG   +A  
Sbjct: 309 LPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARK 368

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+ + +++V+ W+SMI  F  NG   EA++ F  M    L  + VTF++ + ACS+ G 
Sbjct: 369 VFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGN 428

Query: 515 LEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAM 571
           +++G W   + ++  YG+  +      + D+  + G++  A+   D+M  + + S W A+
Sbjct: 429 VKEG-WKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           +    +H +++ A  + +++L   ++P+E +   +L
Sbjct: 488 LSACRIHKEVDLAGEIAEKLLS--MEPDESSVYVLL 521



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 205/398 (51%), Gaps = 12/398 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   +  GL  D   +  L+E YA+ G++ S++ VFD     +S +W VL+K Y+  + 
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSK 190

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVIQT 134
             E   L++ M      +       +++AC ++     G+ VHG  I+  F D+   ++ 
Sbjct: 191 DSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEA 250

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           SI+  Y +   LD+ARK+F+    R+VV W+++I+ +       E + +F  M+ E + P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILP 310

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T+ ++  +C  L SLR  +S+HG+++R  I++D     SFI  Y++CG++  A + F
Sbjct: 311 NHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVF 370

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             + KR   SW++MI+ +  +G F++AL+ F  M      PN +T +++L +C+  G ++
Sbjct: 371 DMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVK 430

Query: 315 EG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS-WNMLIS 372
           EG K         G+ PE ++    +++     G++ E +  I  +  + + S W  L+S
Sbjct: 431 EGWKQFESMTRDYGLVPEEEHYA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489

Query: 373 E---YARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
               +    ++ E  E L+ M+     PD  SV   LS
Sbjct: 490 ACRIHKEVDLAGEIAEKLLSME-----PDESSVYVLLS 522


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 196/617 (31%), Positives = 340/617 (55%), Gaps = 33/617 (5%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           ++ +D   W+S+IA      +    L  F  M    V  +  T  +L +AC  L  L P 
Sbjct: 13  ISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT--TSWTAMISCYN 273
             +H ++ R  +  D     + +  Y KCG    A + F ++ +      SWTA+IS Y+
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 274 RSGWFQKALESFVKMLEVKE-------EPNLITLITVLGSCA---GLGWLREGKSVHCQI 323
            +G   +A  +F +M  ++          ++++L  ++ +CA   G   LR G +VH  +
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSK 381
           ++ G G    +LG +++  Y+ C  +    +V + I   +R+++SWN LIS +   G ++
Sbjct: 192 VKYGFGVS-THLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250

Query: 382 EAL---ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-----IDCKDE 433
            AL   E +V   T  + P+  +V + L +C  +G ++    +H ++       +  KD 
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V ++L+DM+++CG   LA  +F+ ++ K+VV W++MI G+ Q     EA+ LF QM + 
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 494 C------LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
                  ++ + VT ++ I ACS +G       +H   ++ G+ +D  I +AL DM AKC
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 548 GDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           GD++  ++VF  M E  R VVSWS+MI   G+HG+   A  LF +M   G +PNE+T+++
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L ACSH+G VE+GK  FN+M + +G+ P  +HYAC+VDLL R+G ++ A  +I +MP  
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
           A+ ++WG+LL  C +H    + + +EK++    +N  G++ LL+N+Y + G WD+  ++R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 725 SIMEVTGLKKVPGYSTI 741
             +  +GL+K+PG S I
Sbjct: 611 VELRRSGLRKIPGQSFI 627



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 163/586 (27%), Positives = 286/586 (48%), Gaps = 34/586 (5%)

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
           +    D+F W  LI      N  + ++  + +M       +NF +P++L+AC++L  L  
Sbjct: 12  SISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASY 171
             +VH  + + G   D     +++  YG+ G    A +VFD+M   S DVVSW+++I++Y
Sbjct: 71  TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130

Query: 172 FDNADVSEGLKMFHSMV-------REGVEPDFVTMLSLAEACGELCS---LRPARSIHGH 221
             N  V E    F  M         E    D V++ +L  AC   C    LR   ++HG 
Sbjct: 131 SSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQ 279
           V++    +   LGNS + MYS C D+  A R F  + IE+R   SW ++IS +  +G  +
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250

Query: 280 KALESFVKMLEVKE---EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG---MGPEYD 333
           +AL +F  M+       EPN +T+I +L SCA LG +     VH  I  +    +  +  
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL++ +A CG ++   ++   +  +N++ W+ +I+ Y +    +EAL L  QM   
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 394 GLM------PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKC 446
           G M      P++ ++ S ++AC  +G+ +    IH + +     +D  + S+LIDM +KC
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 447 GFKNLAYLLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           G       +F  + +  ++VV W+SMI     +G    A+ LF +M     E +E+T+++
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 505 AIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-E 562
            + ACS+ G +E+GK   + +   YG+         L D+  + G L  A  V  +M  +
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQM--LDSGIKPNEVTFMNI 606
            ++  W +++    +HG       + K++  LDS    + V   N+
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANM 596



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 247/512 (48%), Gaps = 36/512 (7%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L ++C  LR+L    ++HA+L   GL  D  ++  L+++Y + G    +  VFD   E  
Sbjct: 58  LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117

Query: 59  -DSFMWAVLIKCYMWNNFFEESILLYHKMI-------REQATISNFIYPSVLRACS---S 107
            D   W  LI  Y  N   +E+   + +M         E   +      +++ AC+    
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCG 177

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWS 165
              L  G  VHG ++K GF     +  S++  Y     +  A +VF+   +  RDVVSW+
Sbjct: 178 SNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWN 237

Query: 166 SIIASYFDNADVSEGLKMFHSMVREG---VEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           S+I+ +  N +    L+ F  MV EG   VEP+ VT+++L ++C EL  +  +  +H ++
Sbjct: 238 SLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI 297

Query: 223 LRRK----IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
             R     +  D  +  + + M+++CG+L  A   F  +E +    W+AMI+ Y +    
Sbjct: 298 SSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCP 357

Query: 279 QKALESFVKML------EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           ++AL  F +ML       V+ +PN +TL++V+ +C+ LG  R    +H   +  G+  + 
Sbjct: 358 EEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDA 417

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGE--RNILSWNMLISEYARKGMSKEALELLVQM 390
             +  ALI+  A+CG +    +V   + E  R ++SW+ +I      G  K ALEL  +M
Sbjct: 418 -RIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM 476

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGF 448
           +T G  P+  +  S LSAC + G ++ G      + K        +  + L+D+  + G 
Sbjct: 477 RTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGH 536

Query: 449 KNLAYLLFERIQQKS-VVMWNSMICGFYQNGN 479
            + A+ +   +  K+ + +W S++   + +GN
Sbjct: 537 LDEAHNVILNMPIKADLALWGSLLAACHLHGN 568


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 205/655 (31%), Positives = 340/655 (51%), Gaps = 17/655 (2%)

Query: 87  IREQATISNFIYPSV-LRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFG 144
           + EQ   S+F+ P+  +      GD+ + + +   I     F  D ++   ++  YG+ G
Sbjct: 71  LEEQNQKSDFVDPAAYVSLLKQAGDVTALKTIQAHISHSKRFSGDRLLLNCVVEAYGKCG 130

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
           C+ DAR VF  +   +V SW+ ++A+Y  N      L++   M   GV P+ VT+ ++  
Sbjct: 131 CVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIG 190

Query: 205 ACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           A  EL     AR IH       ++  D  L  + I MY+KCGD+  AE  F +   +   
Sbjct: 191 AVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLA 250

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
              AMIS Y + G+   A+ +F ++     +PN +T   +  +CA  G   + +  H   
Sbjct: 251 CCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCF 310

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I   + P+   +  AL+  Y+ CG + +  +V   +  +N+++WN++I+ YA++G + EA
Sbjct: 311 ILSKLRPDV-VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEA 369

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDM 442
           L+L V M+  G+ PD  +  + L +C     L  G  IH HV+         V S+LI M
Sbjct: 370 LQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITM 429

Query: 443 YSKCGFKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           YS CG    A  +F +      SV+ W +M+    +NG    A+ LF +M L  ++ + V
Sbjct: 430 YSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVV 489

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TF++ I ACS+IG L +G  +  ++I  G   D+ + T+L ++Y KCG L  A  VF  +
Sbjct: 490 TFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHL 549

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           S +N+V+W+ ++     +G+   +A L ++M   G +PNE+T +N+L+ CSH+G V +  
Sbjct: 550 SFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAV 609

Query: 621 FYFNAMRIFG--VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
            YF +M ++G  + P  +HY C+VDLL RSG +E     I S PF  +  +W +LL  C 
Sbjct: 610 SYFRSM-VYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCV 668

Query: 679 IHKRIDVMKTIEKELSVTGTN--DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           IH   DV + +     V G +  +   Y LLSN++A  G  D    V+S+ ++ G
Sbjct: 669 IHS--DVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLD---AVKSLAKLAG 718



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 157/606 (25%), Positives = 279/606 (46%), Gaps = 46/606 (7%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++E+Y + G ++ +RLVF + + P+ + W +L+  Y  N   +  + L  +M       +
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
                +V+ A S LGD     K+H R    C    D V+ T+++  Y + G +  A  VF
Sbjct: 182 AVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVF 241

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D+  ++D+   +++I++Y       + +  F+ +   G++P+ VT   L  AC       
Sbjct: 242 DQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYS 301

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
            AR  H   +  K++ D  +  + + MYS+CG L  A R F ++  +   +W  MI+ Y 
Sbjct: 302 DARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYA 361

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G+  +AL+ +V M     EP+ IT + VL SC+    L  G+ +H  ++  G      
Sbjct: 362 QEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLT 421

Query: 334 YLGPALIEFYAECGKMSECEKVIH--AIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
            L  ALI  Y+ CG + +   V H       +++SW  +++   R G  + AL L  +M 
Sbjct: 422 VLS-ALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMD 480

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKN 450
             G+  +  +  S++ AC ++G+L  G  I   VI      D  + +SLI++Y KCG  +
Sbjct: 481 LEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLD 540

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F  +  K++V WN+++    QNG    +  L  +M L+  + +E+T L  +  CS
Sbjct: 541 YALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCS 600

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           + G + K        +SY            + +Y  C             SE     +  
Sbjct: 601 HNGLVAKA-------VSY----------FRSMVYGHC---------LVPTSEH----YGC 630

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKP---NEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           ++D  G  GQL +  +          KP   + V +M++L +C     VE G     A R
Sbjct: 631 LVDLLGRSGQLEEVEAFISS------KPFSLDSVLWMSLLGSCVIHSDVERG--LRAARR 682

Query: 628 IFGVEP 633
           + G++P
Sbjct: 683 VLGLDP 688



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 201/402 (50%), Gaps = 4/402 (0%)

Query: 15  RLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           ++HA    T  L YD    T LI+ YA+ G +  + +VFD  +  D      +I  Y+  
Sbjct: 203 KIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQL 262

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            +  +++  ++++       +   Y  + RAC++ G        H   I      D V+ 
Sbjct: 263 GYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVN 322

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           T+++  Y   G L+DAR+VFD+M  ++VV+W+ +IA Y       E L+++ SM   GVE
Sbjct: 323 TALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVE 382

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           PD +T +++ E+C     L   R IH HV+         + ++ I MYS CG L  A   
Sbjct: 383 PDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDV 442

Query: 254 FVK--IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           F K         SWTAM++   R+G  + AL  F KM     + N++T ++ + +C+ +G
Sbjct: 443 FHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIG 502

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L EG ++  ++I  G   +   LG +LI  Y +CG++    +V H +  +NI++WN ++
Sbjct: 503 ALVEGHAIFERVIVTGYLIDV-VLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTIL 561

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +  ++ G    + ELL +M   G  P+  ++ + L  C + G
Sbjct: 562 AASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNG 603


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 198/630 (31%), Positives = 330/630 (52%), Gaps = 8/630 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           + H +I+  GF  D  + T +     + G +  AR +F  +   DV  ++ ++  +  N 
Sbjct: 38  QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 176 DVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
                L +F H      ++P+  T      A       R    IHG  +      +  LG
Sbjct: 98  SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKE 293
           ++ + MY K   +  A + F ++ ++ T  W  MIS Y ++  + ++++ F  ++ E   
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
             +  TL+ +L + A L  LR G  +H    + G    +DY+    I  Y++CGK+    
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY-SHDYVLTGFISLYSKCGKIKMAS 276

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +       +I+++N +I  Y   G ++ +L L  ++   G    S ++ S +   G+  
Sbjct: 277 TLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGH-- 334

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L L   IHG+ +K +      V ++L  +YSK      A  LF+   +KS+  WN+MI 
Sbjct: 335 -LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+ QNG + +AI+LF +M  +    + VT    + AC+ +G L  GKWVH  + S     
Sbjct: 394 GYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            IY+ TAL  MYAKCG +  A+R+FD M ++N V+W+ MI  YG+HG   +A ++F +ML
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEML 513

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDI 651
           +SGI P  VTF+ +L+ACSH+G V+EG   FN+M   +G EP ++HYAC+VD+L R+G +
Sbjct: 514 NSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHL 573

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           + A + I +MP     S+W  LL  CRIHK  ++ +T+ ++L     ++ GY+ LLSNI+
Sbjct: 574 QRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + N+ +   VR   +   L K PGY+ I
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLI 663



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/622 (26%), Positives = 312/622 (50%), Gaps = 18/622 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + LF+  T++  L + HA +++ G   D    T+L +  +++G++  +R +F + + PD 
Sbjct: 24  LDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
           F++ VL++ +  N     S+ ++  + +      N   Y   + A S   D  +G  +HG
Sbjct: 84  FLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHG 143

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + I  G D + ++ ++I+  Y +F  ++DARKVFD+M  +D + W+++I+ Y  N    E
Sbjct: 144 QAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 203

Query: 180 GLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            +++F  ++ E     D  T+L +  A  EL  LR    IH    +        +   FI
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML---EVKEEP 295
            +YSKCG +  A   F +  +    ++ AMI  Y  +G  + +L  F +++      +  
Sbjct: 264 SLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSS 323

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
            L++L+ V G    L +   G S+    +       +  +  AL   Y++  ++    K+
Sbjct: 324 TLVSLVPVSGHLM-LIYAIHGYSLKSNFL------SHTSVSTALTTVYSKLNEIESARKL 376

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
                E+++ SWN +IS Y + G++++A+ L  +MQ     P+  ++   LSAC  +G+L
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGAL 436

Query: 416 QLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            LG  +H  V   D +   +V ++LI MY+KCG    A  LF+ + +K+ V WN+MI G+
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGY 496

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKD 533
             +G+  EA+ +F +M  + +    VTFL  + ACS+ G +++G  + + +I  YG    
Sbjct: 497 GLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQML 592
           +     + D+  + G LQ A +  ++M  +   S W  ++    +H   N A ++ +++ 
Sbjct: 557 VKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLF 616

Query: 593 DSGIKPNEVTFMNILWACSHSG 614
           +  + P+ V + ++L +  HS 
Sbjct: 617 E--LDPDNVGY-HVLLSNIHSA 635


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 217/712 (30%), Positives = 362/712 (50%), Gaps = 32/712 (4%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA---------TISNFIYPSV 101
           VFDT    D   W  L+  Y    +   +  L+  M+ + +         T  + I  + 
Sbjct: 221 VFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATS 280

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           L +CSS    G  ++V  R++K G   D  + ++++  +   G LD+A+ +F  +  R+ 
Sbjct: 281 LSSCSS----GVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNA 336

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC----SLRPARS 217
           V+ + +I          E + +F    R+    +  T + L  A  E       L   R 
Sbjct: 337 VTLNGLIVGLVKQHCSEEAVGIFMG-TRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGRE 395

Query: 218 IHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           +HGH+LR   I +   L N  + MY+KCG +  A R F  +  R   SW  +IS  +++G
Sbjct: 396 VHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNG 455

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + + A+ ++  M +    P+    I+ L SCA L  L  G+ VHC  ++ G+  +   + 
Sbjct: 456 FCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTS-VS 514

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWN----MLISEYARKGMSKEALELLVQMQT 392
            AL++ Y +CG  SE  ++ +++ E +I+SWN    +++S +A    + E++E+   M  
Sbjct: 515 NALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAP---TAESVEVFSNMMR 571

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNL 451
            GL P+  +  + LSA   +  L+LG Q+H  V+K    +D  V ++L+  Y+K G  + 
Sbjct: 572 SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDS 631

Query: 452 AYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
              LF  +  ++  V WNSMI G+  NG+  E ++    M  +   +D  TF   + AC+
Sbjct: 632 CEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACA 691

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           ++  LE+G  +H   I   +  D+ +++AL DMY+KCG +  A +VF+SMS++N  SW++
Sbjct: 692 SVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNS 751

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           MI  Y  HG    A  +F++M  +G  P+ VTF+++L ACSH+G V+ G  YF  M   G
Sbjct: 752 MISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHG 811

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK---RIDVMK 687
           + P ++HY+C++DLL R+G +    + I+ MP   N  IW  +L  CR  K   RID+ K
Sbjct: 812 ILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGK 871

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
              + L      +   Y L SN YA  G W++  K R+ M    +KK  G S
Sbjct: 872 EASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQS 923



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 190/712 (26%), Positives = 344/712 (48%), Gaps = 49/712 (6%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           RLH  L+  GL +D   S  L+  YA+   L ++R VFD   E ++  W  L+  Y+ + 
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 75  FFEESILLYHKMIREQATISN---FIYPSVLRACSSLGD--LGSGEKVHGRIIKCGFDKD 129
             +E+  ++  M+ E +  S    F + SVLRAC   G   L    +VHG + K  +  +
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 130 DVIQTSILCTYGE--FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
             +  +++  YG    G    A++VFD    RD+++W+++++ Y     V     +F +M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256

Query: 188 VREG----VEPDFVTMLSLAEACG-ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           + +     + P+  T  SL  A     CS      +   VL+     D  +G++ +  ++
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFA 316

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMI------SCYNRS-GWFQKALESFVKMLEVKEEP 295
           + G L  A+  F+ +++R   +   +I       C   + G F    +SFV         
Sbjct: 317 RHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV-------- 368

Query: 296 NLITLITVLGSCAGLG----WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           N  T + +L + A        L  G+ VH  I+R G+      L   L+  YA+CG + +
Sbjct: 369 NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDK 428

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             +V   +  R+ +SWN +IS   + G  + A+     M+   + P +F+  S LS+C +
Sbjct: 429 ASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCAS 488

Query: 412 VGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           +  L  G Q+H   +K  +D  D  V ++L+ MY  CG ++ ++ +F  + +  +V WNS
Sbjct: 489 LRLLTAGQQVHCDAVKWGLDL-DTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNS 547

Query: 470 MI-CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           ++      +  + E++ +F  M  + L  ++VTF+  + A S +  LE GK VH  ++ +
Sbjct: 548 IMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKH 607

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASL 587
           G  +D  +D AL   YAK GD+ + +++F SMS  R+ VSW++MI  Y  +G L +    
Sbjct: 608 GAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDC 667

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV----EPDLQHYACMVD 643
              M+ S    +  TF  +L AC+   ++E G      M  FG+    E D+   + ++D
Sbjct: 668 VWLMMHSNQMLDCCTFSIVLNACASVAALERGM----EMHAFGIRSQLESDVVVESALLD 723

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRIDVMKTIEK 691
           + S+ G I+ A K+ +SM    N   W ++++G   H    K +++ + +++
Sbjct: 724 MYSKCGRIDYASKVFNSMS-QKNEFSWNSMISGYARHGLGEKALEIFEEMQR 774



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 165/623 (26%), Positives = 300/623 (48%), Gaps = 34/623 (5%)

Query: 81  LLYHKMIREQATISNF---IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
           LL H++   Q   S     ++P         G+  + E++H  ++K G   D  +   ++
Sbjct: 39  LLAHRLPPPQTPPSRSPPPVHPHAGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLV 98

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE---P 194
             Y +   L  AR+VFD M  R+ VSW+ +++ Y  +    E  ++F +M+ EG E   P
Sbjct: 99  NLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRP 158

Query: 195 DFVTMLSLAEACGELCS--LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC--GDLLSA 250
              T  S+  AC +     L  A  +HG V +     +  + N+ I MY  C  G  L A
Sbjct: 159 TPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQA 218

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE----VKEEPN------LITL 300
           ++ F     R   +W A++S Y + G+       F+ ML     ++  PN      LIT 
Sbjct: 219 QQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLIT- 277

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            T L SC+  G L +   V  ++++ G   +  Y+G AL+  +A  G + E + +   + 
Sbjct: 278 ATSLSSCSS-GVLDQ---VFARVLKSGSSSDL-YVGSALVSAFARHGMLDEAKDIFINLK 332

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNV--GSLQL 417
           ERN ++ N LI    ++  S+EA+ + +  + ++ +  D+F V  S  A  ++    L  
Sbjct: 333 ERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMR 392

Query: 418 GLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           G ++HGH+++   ID K   + + L++MY+KCG  + A  +F  +  +  V WN++I   
Sbjct: 393 GREVHGHILRTGLIDLKIA-LSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVL 451

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            QNG    A+  +  M   C+       ++ + +C+++  L  G+ VH   + +G+  D 
Sbjct: 452 DQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDT 511

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC-YGMHGQLNDAASLFKQMLD 593
            +  AL  MY  CG    +  +F+SM+E ++VSW++++      H    ++  +F  M+ 
Sbjct: 512 SVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMR 571

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
           SG+ PN+VTF+N+L A S    +E GK     +   G   D      ++   ++SGD++ 
Sbjct: 572 SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDS 631

Query: 654 AFKMIHSMPFPANGSIWGALLNG 676
             ++  SM    +   W ++++G
Sbjct: 632 CEQLFSSMSGRRDAVSWNSMISG 654



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 259/515 (50%), Gaps = 22/515 (4%)

Query: 16  LHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +H H+L TGL       S  L+  YA+ G++  +  VF      D   W  +I     N 
Sbjct: 396 VHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNG 455

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           F E +++ Y  M +   + SNF   S L +C+SL  L +G++VH   +K G D D  +  
Sbjct: 456 FCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSN 515

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF-DNADVSEGLKMFHSMVREGVE 193
           +++  YG+ G   ++ ++F+ M   D+VSW+SI+      +A  +E +++F +M+R G+ 
Sbjct: 516 ALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLT 575

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+ VT ++L  A   L  L   + +H  VL+     D  + N+ +  Y+K GD+ S E+ 
Sbjct: 576 PNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQL 635

Query: 254 FVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           F  +  +R   SW +MIS Y  +G  Q+ ++    M+   +  +  T   VL +CA +  
Sbjct: 636 FSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAA 695

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G  +H   IR  +  +   +  AL++ Y++CG++    KV +++ ++N  SWN +IS
Sbjct: 696 LERGMEMHAFGIRSQLESDV-VVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMIS 754

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL------QIHGHVI 426
            YAR G+ ++ALE+  +MQ  G  PD  +  S LSAC + G +  GL      + HG + 
Sbjct: 755 GYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILP 814

Query: 427 KIDCKDEFVQSSLIDMYSKCG--FKNLAYLLFERIQQK-SVVMWNSMI--CGFYQNGNSL 481
            I+       S +ID+  + G   K   Y+   R+  K + ++W +++  C   ++G+ +
Sbjct: 815 HIEH-----YSCVIDLLGRAGKLLKIQEYI--NRMPMKPNTLIWRTVLVACRQSKDGDRI 867

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           +      +M L     + V ++ A    +  G+ E
Sbjct: 868 DLGKEASRMLLELEPQNPVNYVLASNFYAATGRWE 902



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 3/115 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C ++  L R   +HA  + + L  D    + L++ Y++ G +  +  VF++  + +
Sbjct: 686 VLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKN 745

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
            F W  +I  Y  +   E+++ ++ +M R  A   +  + SVL ACS  G +  G
Sbjct: 746 EFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRG 800


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 207/646 (32%), Positives = 350/646 (54%), Gaps = 10/646 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSR 159
           VL+AC S+ D   GE++H   +KCG D+ +V   TS++  Y + G + +  +VF+ M  +
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           +VV+W+S++         SE + +F  M  EG+ P+  T  S+  A     +L   + +H
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH 224

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              ++   +    + NS + MY+KCG +  A+  F  +E R   SW  +++    +    
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL 284

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +AL+ F +      +    T  TV+  CA L  L   + +H  +++ G     + +  AL
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM-TAL 343

Query: 340 IEFYAECGKMSECEKVIH-AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
            + Y++CG++++   +     G RN++SW  +IS   + G    A+ L  +M+   +MP+
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+ ++ L A  ++    L  QIH  VIK + +   FV ++L+  YSK G    A  +F+
Sbjct: 404 EFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFK 459

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS-NIGQLE 516
            I+QK VV W++M+    Q G+   A  LF++M +  ++ +E T  + I AC+     ++
Sbjct: 460 MIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVD 519

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +G+  H   I Y     I + +AL  MY++ G++ +AQ VF+  ++R++VSW++MI  Y 
Sbjct: 520 QGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYA 579

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDL 635
            HG    A   F+QM  SGI+ + VTF+ ++  C+H+G V EG+ YF++M R   + P +
Sbjct: 580 QHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTM 639

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HYACMVDL SR+G ++    +I  MPFPA   +W  LL  CR+HK +++ K    +L  
Sbjct: 640 EHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLS 699

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +D+  Y LLSNIYA  G W E  +VR +M+   +KK  G S I
Sbjct: 700 LEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWI 745



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 304/626 (48%), Gaps = 50/626 (7%)

Query: 31  ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           A T L++ Y + GS+     VF+   + +   W  L+          E + L+ +M  E 
Sbjct: 137 AGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG 196

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
              + F + SVL A +S G L  G++VH + +K G      +  S++  Y + G ++DA+
Sbjct: 197 IWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAK 256

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH---SMVREGVEPDFVTMLSLAEACG 207
            VF+ M +RD+VSW++++A    N    E L++FH   + + +  +  + T++ L   C 
Sbjct: 257 SVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKL---CA 313

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF-VKIEKRCTTSWT 266
            L  L  AR +H  VL+    + G +  +    YSKCG+L  A   F +    R   SWT
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWT 373

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           A+IS   ++G    A+  F +M E +  PN  T   +L   A L  L     +H Q+I+ 
Sbjct: 374 AIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--ASLSIL--PPQIHAQVIKT 429

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                  ++G AL+  Y++ G   +   +   I ++++++W+ ++S +A+ G  + A  L
Sbjct: 430 NY-QHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYL 488

Query: 387 LVQMQTWGLMPDSFSVASSLSACG-NVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYS 444
             +M   G+ P+ F+++S + AC      +  G Q H   IK    D   V S+L+ MYS
Sbjct: 489 FNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYS 548

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           + G  + A ++FER   + +V WNSMI G+ Q+G S++AI  F QM  + ++MD VTFL 
Sbjct: 549 RKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLA 608

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            I  C++ G + +G+               Y D+ + D            ++  +M    
Sbjct: 609 VIMGCTHNGLVVEGQQ--------------YFDSMVRD-----------HKINPTMEH-- 641

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
              ++ M+D Y   G+L++  SL + M         + +  +L AC    +VE GK  F+
Sbjct: 642 ---YACMVDLYSRAGKLDETMSLIRDM---PFPAGAMVWRTLLGACRVHKNVELGK--FS 693

Query: 625 AMRIFGVEP-DLQHYACMVDLLSRSG 649
           A ++  +EP D   Y  + ++ + +G
Sbjct: 694 ADKLLSLEPHDSSTYVLLSNIYAAAG 719



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 210/419 (50%), Gaps = 29/419 (6%)

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y R G   + L+ F          +  TL  VL +C  +     G+ +HC  ++ G    
Sbjct: 74  YARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
               G +L++ Y +CG + E  +V   + ++N+++W  L++  A   M  E + L  +M+
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKN 450
             G+ P+ F+ AS LSA  + G+L LG ++H   +K  C+   FV +SL++MY+KCG   
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F  ++ + +V WN+++ G   N   LEA+ LFH+      +M + T+ T I+ C+
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD-SMSERNVVSWS 569
           N+ QL   + +H  ++ +G      + TAL D Y+KCG+L  A  +F  +   RNVVSW+
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWT 373

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF-------MNILWACSHSGSVEEGKFY 622
           A+I     +G +  A  LF +M +  + PNE T+       ++IL    H+  ++    +
Sbjct: 374 AIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQH 433

Query: 623 F------------------NAMRIFGV--EPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
                              +A+ IF +  + D+  ++ M+   +++GD EGA  + + M
Sbjct: 434 IPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKM 492



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 212/443 (47%), Gaps = 21/443 (4%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+HA  +  G          L+  YA+ G +  ++ VF+  +  D   W  L+     N 
Sbjct: 222 RVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNE 281

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ L+H+       ++   Y +V++ C++L  L    ++H  ++K GF     + T
Sbjct: 282 CELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMT 341

Query: 135 SILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           ++   Y + G L DA  +F   T SR+VVSW++II+    N D+   + +F  M  + V 
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T  ++ +A   L  L P   IH  V++   +    +G + +  YSK G    A   
Sbjct: 402 PNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSI 457

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA-GLGW 312
           F  IE++   +W+AM+SC+ ++G  + A   F KM     +PN  T+ +V+ +CA     
Sbjct: 458 FKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG 517

Query: 313 LREGKSVHCQIIRKGMGPEYDY-----LGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           + +G+  H   I+      Y Y     +  AL+  Y+  G +   + V     +R+++SW
Sbjct: 518 VDQGRQFHAISIK------YRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI- 426
           N +IS YA+ G S +A+E   QM+  G+  D  +  + +  C + G +  G Q    ++ 
Sbjct: 572 NSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR 631

Query: 427 --KIDCKDEFVQSSLIDMYSKCG 447
             KI+   E   + ++D+YS+ G
Sbjct: 632 DHKINPTMEHY-ACMVDLYSRAG 653



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 2/312 (0%)

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++ +YAR+GM  E L+     +  G++ DS +++  L AC +V    LG Q+H   +K
Sbjct: 68  NRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 428 I--DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
              D  +    +SL+DMY KCG       +FE + +K+VV W S++ G        E + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF +M    +  +  TF + + A ++ G L+ G+ VH + + +G R  +++  +L +MYA
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG ++ A+ VF+ M  R++VSW+ ++    ++    +A  LF +   +  K  + T+  
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           ++  C++   +   +   + +   G          + D  S+ G++  A  +        
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 666 NGSIWGALLNGC 677
           N   W A+++GC
Sbjct: 368 NVVSWTAIISGC 379


>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 209/651 (32%), Positives = 338/651 (51%), Gaps = 12/651 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGF---DKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           S+L+ CS++  L    ++H  I+        +   +  +IL  Y   G L D+  VFDKM
Sbjct: 15  SLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKM 74

Query: 157 TSRDVVSWSSIIASYF---DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
             R +VS+++++A+Y     N  +S  L+++  MV  G+ P   T  SL +A   L    
Sbjct: 75  PRRTIVSYNALLAAYSRASPNHAIS-ALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWW 133

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
              S+H    +  +  D  L  S + MYS CGDL SAE  F  +  R   +W ++I  Y 
Sbjct: 134 FGSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYL 192

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           ++   ++ +  F+KM+ V   P   T   VL SC+ L   R G+ +H  +I + +  +  
Sbjct: 193 KNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDL- 251

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +L  AL++ Y   G M    ++   +   +++SWN +I+ Y+     ++A+ L VQ+Q  
Sbjct: 252 HLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEM 311

Query: 394 GL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNL 451
               PD ++ A  +SA G   S   G  +H  VIK    +  FV S+L+ MY K    + 
Sbjct: 312 CFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDA 371

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A+ +F  I  K VV+W  MI G+ +  + + AI  F QM     E+D+      + AC+N
Sbjct: 372 AWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACAN 431

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  L +G+ +H   +  G   ++ +  +L DMYAK G L+ A  VF  +SE ++  W++M
Sbjct: 432 LAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSM 491

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           +  Y  HG + +A  +F+++L  G+ P++VTF+++L ACSHS  VE+GKF +N M   G+
Sbjct: 492 LGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGL 551

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF-PANGSIWGALLNGCRIHKRIDVMKTIE 690
            P L+HY+CMV L SR+  +E A ++I+  P+   N  +W  LL+ C I+K   V     
Sbjct: 552 IPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAA 611

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +E+      D     LLSN+YA    WD+  ++R  M    L K PG S I
Sbjct: 612 EEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWI 662



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 289/584 (49%), Gaps = 14/584 (2%)

Query: 1   MPLFRSC---TNLRKLTRLHAHLLVTGLHY---DPPASTRLIESYAEMGSLRSSRLVFDT 54
           + L + C   T+LR+  +LHA +L T   +    P     ++  YA  GSL  S LVFD 
Sbjct: 14  LSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 73

Query: 55  FKEPDSFMWAVLIKCY--MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG 112
                   +  L+  Y     N    ++ LY +M+      S+  + S+L+A S L    
Sbjct: 74  MPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWW 133

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
            G  +H +  K G + D  +QTS+L  Y   G L  A  VF  M  RD V+W+S+I  Y 
Sbjct: 134 FGSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYL 192

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
            N  + EG+ +F  M+  G  P   T   +  +C  L   R  R IH HV+ R + +D  
Sbjct: 193 KNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLH 252

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV- 291
           L N+ + MY   G++ +A R F ++E     SW +MI+ Y+ +   +KA+  FV++ E+ 
Sbjct: 253 LQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMC 312

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +P+  T   ++ +         GKS+H ++I+ G      ++G  L+  Y +  +   
Sbjct: 313 FPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSV-FVGSTLVSMYFKNHESDA 371

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             +V  +I  ++++ W  +I+ Y++      A+    QM   G   D + ++  ++AC N
Sbjct: 372 AWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACAN 431

Query: 412 VGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           +  L+ G  IH + +K+    E  V  SLIDMY+K G    AYL+F ++ +  +  WNSM
Sbjct: 432 LAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSM 491

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           + G+  +G   EA+ +F ++    L  D+VTFL+ + ACS+   +E+GK++ + + S G+
Sbjct: 492 LGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGL 551

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAMI 572
              +   + +  ++++   L+ A+ + +     E N+  W  ++
Sbjct: 552 IPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLL 595



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 247/505 (48%), Gaps = 10/505 (1%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTFVK 256
           LSL + C  + SLR AR +H  +L            + N+ + MY++CG L  +   F K
Sbjct: 14  LSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 73

Query: 257 IEKRCTTSWTAMISCYNRSGWFQ--KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
           + +R   S+ A+++ Y+R+       ALE + +M+     P+  T  ++L + + L    
Sbjct: 74  MPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWW 133

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G S+H +  + G+      L  +L+  Y+ CG +S  E V   + +R+ ++WN LI  Y
Sbjct: 134 FGSSLHAKGFKLGLND--ICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGY 191

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
            +    +E + L ++M + G  P  F+    L++C  +   + G  IH HVI  +   D 
Sbjct: 192 LKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDL 251

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            +Q++L+DMY   G    AY +F R++   +V WNSMI G+ +N +  +A+NLF Q+   
Sbjct: 252 HLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEM 311

Query: 494 CL-EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           C  + D+ T+   I A         GK +H ++I  G  + +++ + L  MY K  +   
Sbjct: 312 CFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDA 371

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A RVF S+S ++VV W+ MI  Y        A   F QM+  G + ++     ++ AC++
Sbjct: 372 AWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACAN 431

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
              + +G+         G + ++     ++D+ +++G +E A+ +   +  P +   W +
Sbjct: 432 LAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEP-DLKCWNS 490

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTG 697
           +L G   H  ++    + +E+   G
Sbjct: 491 MLGGYSHHGMVEEALQVFEEILKQG 515



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 180/377 (47%), Gaps = 9/377 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC+ L+       +HAH++V  +  D      L++ Y   G+++++  +F   + PD
Sbjct: 222 VLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPD 281

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQ--ATISNFIYPSVLRACSSLGDLGSGEKV 117
              W  +I  Y  N   E+++ L+ ++ +E       ++ Y  ++ A         G+ +
Sbjct: 282 LVSWNSMIAGYSENEDGEKAMNLFVQL-QEMCFPKPDDYTYAGIISATGVFPSSSYGKSL 340

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  +IK GF++   + ++++  Y +    D A +VF  ++ +DVV W+ +I  Y    D 
Sbjct: 341 HAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDG 400

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
              ++ F  MV EG E D   +  +  AC  L  LR    IH + ++    ++  +  S 
Sbjct: 401 ICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSL 460

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MY+K G L +A   F ++ +     W +M+  Y+  G  ++AL+ F ++L+    P+ 
Sbjct: 461 IDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQ 520

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T +++L +C+    + +GK +   +   G+ P   +    ++  ++    + E E++I+
Sbjct: 521 VTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYS-CMVTLFSRAALLEEAEEIIN 579

Query: 358 AIG--ERNILSWNMLIS 372
                E N+  W  L+S
Sbjct: 580 KSPYIEDNLELWRTLLS 596


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 195/629 (31%), Positives = 329/629 (52%), Gaps = 7/629 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           + H + I  G+  D    T +     +F     AR +F  +   D+  ++ ++  +  N 
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 176 DVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
             S  + ++  + R   + PD  T      AC     L     +H H +      +  +G
Sbjct: 90  SPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAHSIIDGYGSNVFVG 146

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ + +Y K   ++ A + F  + +R T  W  MI+   ++  F  +++ F +M+     
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
            +  T+  VL + A L  L+ G  + C  ++ G G   DY+   LI  Y++CG ++    
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFG-FCDYVLTGLISLYSKCGDVNTARL 265

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   I   +++++N +IS +   G ++ +++L  ++   G    S ++   +      G 
Sbjct: 266 LFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGH 325

Query: 415 LQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L L   IHG  +K     +  V ++   +Y+K    +LA  LF+   +K+VV WN+MI G
Sbjct: 326 LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISG 385

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + QNG++  AI+LF +M       + VT  T + AC+ +G L  GKWVHH + S  +  +
Sbjct: 386 YTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPN 445

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           IY+ TAL DMYAKCG++  A ++FDSMSE+N V+W+ MI  YG+HG  ++A  L+ +ML 
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLH 505

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
            G  P+ VTF+++L+ACSH+G V EG + + N +  + +EP ++HYACMVD+L RSG +E
Sbjct: 506 LGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLE 565

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A + I  MP     ++WG LL  C IHK  D+ +   + L        GYY LLSNIY+
Sbjct: 566 KALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYS 625

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            E N+ +   +R +++   L K PG + I
Sbjct: 626 VERNFPKAASIRQVVKKRKLAKSPGCTLI 654



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/599 (26%), Positives = 294/599 (49%), Gaps = 19/599 (3%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L    +    L + HA  ++ G  +D    T+L +   +  + R +R +F +  +PD F+
Sbjct: 18  LINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFL 77

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           + VL++ +  N+    SI LY  + R    +  NF Y   + ACS+   L     +H   
Sbjct: 78  FNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHS 134

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           I  G+  +  + ++++  Y +F  +  ARKVFD M  RD V W+++I     N    + +
Sbjct: 135 IIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSI 194

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  MV +GV  D  T+ ++  A  EL  L+    I    L+        +    I +Y
Sbjct: 195 QLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLY 254

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           SKCGD+ +A   F +I +    ++ AMIS +  +G  + +++ F ++L   E  +  T++
Sbjct: 255 SKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIV 314

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL-IEFYAECGKMSECEKVIHAIG 360
            ++   +  G L    S+H   ++ G+      L P +   F A   K++E +   H   
Sbjct: 315 GLIPLHSPFGHLHLACSIHGFCVKSGI-----ILNPTVSTAFTAIYNKLNEIDLARHLFD 369

Query: 361 ---ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
              E+ +++WN +IS Y + G ++ A+ L  +M      P++ ++ + LSAC  +GSL  
Sbjct: 370 ESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSF 429

Query: 418 GLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           G  +H H+IK +  +   +V ++L+DMY+KCG  + A+ LF+ + +K+ V WN+MI G+ 
Sbjct: 430 GKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYG 488

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
            +G   EA+ L+++M         VTFL+ + ACS+ G + +G+ + H +++ Y +   I
Sbjct: 489 LHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLI 548

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
                + D+  + G L+ A      M  E     W  ++    +H    D A L  + L
Sbjct: 549 EHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD-TDIARLASERL 606



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 33/307 (10%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL     +L     +H   + +G+  +P  ST     Y ++  +  +R +FD   E   
Sbjct: 317 IPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTV 376

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  N   E +I L+ +M++ + T +     ++L AC+ LG L  G+ VH  
Sbjct: 377 VAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHL 436

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I     + +  + T+++  Y + G + +A ++FD M+ ++ V+W+++I  Y  +    E 
Sbjct: 437 IKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEA 496

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           LK+++ M+  G  P  VT LS+  AC     +     I  H +  K +I+ PL       
Sbjct: 497 LKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF-HNMVNKYRIE-PL------- 547

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
                           IE      +  M+    RSG  +KALE F+K + V  EP     
Sbjct: 548 ----------------IEH-----YACMVDILGRSGQLEKALE-FIKKMPV--EPGPAVW 583

Query: 301 ITVLGSC 307
            T+LG+C
Sbjct: 584 GTLLGAC 590


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 202/611 (33%), Positives = 319/611 (52%), Gaps = 72/611 (11%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L ++C    S   AR IH  +++ +   +  + N  +  Y KCG    A + F ++ +R 
Sbjct: 25  LLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRN 84

Query: 262 T-------------------------------TSWTAMISCYNRSGWFQKALESFVKMLE 290
           T                                SW AM+S + +   F++AL  FV M  
Sbjct: 85  TFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHS 144

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
                N  +  + L +CAGL  L  G  +H  +I K       Y+G AL++ Y++CG ++
Sbjct: 145 EDFVLNEYSFGSALSACAGLTDLNMGIQIHA-LISKSRYLLDVYMGSALVDMYSKCGVVA 203

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
             ++    +  RNI+SWN LI+ Y + G + +ALE+ V M   G+ PD  ++AS +SAC 
Sbjct: 204 CAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACA 263

Query: 411 NVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERI--------- 459
           +  +++ GLQIH  V+K D    D  + ++L+DMY+KC   N A L+F+R+         
Sbjct: 264 SWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSET 323

Query: 460 ----------------------QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
                                  +K+VV WN++I G+ QNG + EA+ LF  +    +  
Sbjct: 324 SMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV------RKDIYIDTALTDMYAKCGDLQ 551
              TF   + AC+N+  L+ G+  H +++ +G         DI++  +L DMY KCG ++
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVE 443

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
               VF+ M ER+VVSW+AMI  Y  +G   +A  +F++ML SG KP+ VT + +L ACS
Sbjct: 444 DGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACS 503

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H+G VEEG+ YF++MR   G+ P   H+ CMVDLL R+G ++ A  +I +MP   +  +W
Sbjct: 504 HAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVW 563

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           G+LL  C++H  I++ K + ++L      ++G Y LLSN+YAE G W +  +VR  M   
Sbjct: 564 GSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQR 623

Query: 731 GLKKVPGYSTI 741
           G+ K PG S I
Sbjct: 624 GVIKQPGCSWI 634



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 168/619 (27%), Positives = 293/619 (47%), Gaps = 104/619 (16%)

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
            K++ E   + +  +  +L +C          ++H RIIK  F  +  IQ  ++  YG+ 
Sbjct: 8   QKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKC 67

Query: 144 GCLDDARKVFDKMTSR-------------------------------DVVSWSSIIASYF 172
           G  +DARKVFD+M  R                               D  SW+++++ + 
Sbjct: 68  GYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFA 127

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
            +    E L+ F  M  E    +  +  S   AC  L  L     IH  + + +  +D  
Sbjct: 128 QHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVY 187

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +G++ + MYSKCG +  A+R F  +  R   SW ++I+CY ++G   KALE FV M++  
Sbjct: 188 MGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNG 247

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            EP+ ITL +V+ +CA    +REG  +H +++++        LG AL++ YA+C +++E 
Sbjct: 248 VEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEA 307

Query: 353 EKVIHAIG-------------------------------ERNILSWNMLISEYARKGMSK 381
             V   +                                E+N++SWN LI+ Y + G ++
Sbjct: 308 RLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENE 367

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-------DCKDEF 434
           EA+ L + ++   + P  ++  + L+AC N+  L+LG Q H  ++K        +  D F
Sbjct: 368 EAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIF 427

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V +SLIDMY KCG      L+FER+ ++ VV WN+MI G+ QNG    A+ +F +M ++ 
Sbjct: 428 VGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSG 487

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
            + D VT +  + ACS+ G +E+G+   H +     R ++ +   + D +          
Sbjct: 488 QKPDHVTMIGVLSACSHAGLVEEGRRYFHSM-----RTELGL-APMKDHF---------- 531

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
                         + M+D  G  G L++A  L + M    ++P+ V + ++L AC   G
Sbjct: 532 --------------TCMVDLLGRAGCLDEANDLIQTM---PMQPDNVVWGSLLAACKVHG 574

Query: 615 SVEEGKFYFNAMRIFGVEP 633
           ++E GK+   A ++  ++P
Sbjct: 575 NIELGKYV--AEKLMEIDP 591



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 280/626 (44%), Gaps = 113/626 (18%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD--------------------- 53
           R+HA ++ T    +     RL+++Y + G    +R VFD                     
Sbjct: 40  RIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFG 99

Query: 54  ----------TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLR 103
                     +  EPD   W  ++  +  ++ FEE++  +  M  E   ++ + + S L 
Sbjct: 100 KLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALS 159

Query: 104 ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
           AC+ L DL  G ++H  I K  +  D  + ++++  Y + G +  A++ FD M  R++VS
Sbjct: 160 ACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVS 219

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+S+I  Y  N    + L++F  M+  GVEPD +T+ S+  AC    ++R    IH  V+
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVV 279

Query: 224 RR-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
           +R K + D  LGN+ + MY+KC  +  A   F ++  R   S T+M+  Y R+   + A 
Sbjct: 280 KRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAAR 339

Query: 283 ESFVKMLE----------------------------VKEE---PNLITLITVLGSCAGLG 311
             F  M+E                            +K E   P   T   +L +CA L 
Sbjct: 340 LMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399

Query: 312 WLREGKSVHCQIIRKGM----GPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
            L+ G+  H QI++ G     G E D ++G +LI+ Y +CG + +   V   + ER+++S
Sbjct: 400 DLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVS 459

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +I  YA+ G    ALE+  +M   G  PD  ++   LSAC + G ++ G + + H +
Sbjct: 460 WNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRR-YFHSM 518

Query: 427 KIDC-----KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           + +      KD F  + ++D+  + G  +                               
Sbjct: 519 RTELGLAPMKDHF--TCMVDLLGRAGCLD------------------------------- 545

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTAL 540
           EA +L   M    ++ D V + + + AC   G +E GK+V  KL+    +    Y+   L
Sbjct: 546 EANDLIQTM---PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYV--LL 600

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVV 566
           ++MYA+ G  +   RV   M +R V+
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQRGVI 626



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 218/502 (43%), Gaps = 77/502 (15%)

Query: 6   SCTNLRKLTR-LHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C  L  L   +  H L++   Y  D    + L++ Y++ G +  ++  FD     +   
Sbjct: 160 ACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVS 219

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  LI CY  N    +++ ++  M+            SV+ AC+S   +  G ++H R++
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVV 279

Query: 123 KCGFDKDDVI--------------------------------QTSILCTYGEFGCLDDAR 150
           K    ++D++                                +TS++C Y     +  AR
Sbjct: 280 KRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAAR 339

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            +F  M  ++VVSW+++IA Y  N +  E +++F  + RE + P   T  +L  AC  L 
Sbjct: 340 LMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399

Query: 211 SLRPARSIHGHVLRRKI------KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
            L+  R  H  +L+         + D  +GNS I MY KCG +      F ++ +R   S
Sbjct: 400 DLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVS 459

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS-VHCQI 323
           W AMI  Y ++G+   ALE F KML   ++P+ +T+I VL +C+  G + EG+   H   
Sbjct: 460 WNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMR 519

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
              G+ P  D+                                +  ++    R G   EA
Sbjct: 520 TELGLAPMKDH--------------------------------FTCMVDLLGRAGCLDEA 547

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
            +L+   QT  + PD+    S L+AC   G+++LG  +   +++ID  +      L +MY
Sbjct: 548 NDLI---QTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMY 604

Query: 444 SKCGFKNLAYLLFERIQQKSVV 465
           ++ G       + ++++Q+ V+
Sbjct: 605 AELGRWKDVVRVRKQMRQRGVI 626



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 11/179 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY------DPPASTRLIESYAEMGSLRSSRLVFD 53
           L  +C NL  L    + H  +L  G  +      D      LI+ Y + G +    LVF+
Sbjct: 391 LLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE 450

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
              E D   W  +I  Y  N +   ++ ++ KM+       +     VL ACS  G +  
Sbjct: 451 RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEE 510

Query: 114 GEK-VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
           G +  H    + G        T ++   G  GCLD+A  +   M  + D V W S++A+
Sbjct: 511 GRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAA 569


>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 212/670 (31%), Positives = 346/670 (51%), Gaps = 13/670 (1%)

Query: 79  SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR-IIKCGFDKDDVIQTSIL 137
           S+L     +       +F Y S+L +C++L  L   +++H   I+  GF    V  + ++
Sbjct: 35  SVLFRTHHLNSHYLTCSFPYSSLLHSCNNLQAL---KRIHASLIVSSGFQPLSV-ASKLI 90

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
             Y +      A  + +     + V W+SII S+ D+      L  +  M   GV  D  
Sbjct: 91  TLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSF 150

Query: 198 TMLSLAEACGEL-CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           T   + +A   L C +    ++H   ++     D   GN+ + +Y KCG + +A + F +
Sbjct: 151 TFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDE 210

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           +  R   SWT++IS Y     F +  + F KM  ++ EPN +T++ +L +C+    + EG
Sbjct: 211 MTHRDLVSWTSIISGYIYGESFSRGFKLFNKM-RMEMEPNSVTMVVMLQACSAFESVNEG 269

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           + +H  +I+KG   +       L  +    G   E E     I ER+I+SWN+LI+ Y+ 
Sbjct: 270 RELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSF 329

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ 436
           +G   E  E   +M+   +     S+   +SA  N  +L  G  +H   IK    D  + 
Sbjct: 330 RGDIAEVAERFNEMRR-EVTSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGLHDTVLM 388

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           + L+ +Y+KCG   ++  LF  I  ++ + W+SM+ GF QNG   EAI L+ QM  + L+
Sbjct: 389 TCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQ 448

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVH----HKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
            +     T + A +++G L+ GK  H      L S+       ++T+L +MY +CG + +
Sbjct: 449 PNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISS 508

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A   F+ +  ++VV+W++MI+ +G HG   +A   FK ML+S ++PN VTF+++L ACSH
Sbjct: 509 ALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSH 568

Query: 613 SGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           SG V EG   F++M+  F +EPDL HY CMVDLL RSG ++ A  +I  +    +  IWG
Sbjct: 569 SGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWG 628

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL   R+H+   + +   ++L     ++ GYYTL SNI A    W E  +VR +M    
Sbjct: 629 ALLAASRVHEDKKLGEYAAEKLLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERD 688

Query: 732 LKKVPGYSTI 741
           LKK PG+S I
Sbjct: 689 LKKKPGWSCI 698



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 191/631 (30%), Positives = 331/631 (52%), Gaps = 23/631 (3%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  SC NL+ L R+HA L+V+        +++LI  Y+++   RS+  + ++F+EP++ +
Sbjct: 57  LLHSCNNLQALKRIHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTVI 116

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGSGEKVHGRI 121
           W  +IK ++ +  F  ++L Y +M        +F +P + +A  SLG  +  GE VH   
Sbjct: 117 WNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVA 176

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +K GF +D     ++L  Y + G + +A K+FD+MT RD+VSW+SII+ Y      S G 
Sbjct: 177 MKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGF 236

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           K+F+ M R  +EP+ VTM+ + +AC    S+   R +H +V+++   +D  + NS + MY
Sbjct: 237 KLFNKM-RMEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMY 295

Query: 242 SKCGDL-LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLIT 299
           +K G      E  F +IE+R   SW  +I+ Y+  G   +  E F +M  EV      +T
Sbjct: 296 TKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLT 355

Query: 300 L-ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           L ++ + +CA L    EG  +HC  I+ G+      L   L+  YA+CG +    ++   
Sbjct: 356 LVVSAIANCANLS---EGGMLHCSAIKTGLHD--TVLMTCLLALYAKCGALEISAQLFRD 410

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I  RN ++W+ ++S + + G  KEA+EL  QM   GL P+   +++ + A  ++G+LQLG
Sbjct: 411 IPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLG 470

Query: 419 LQIHGHVIK-----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
              H   I+      +     +++SL++MY +CG  + A + F R+  K VV W SMI G
Sbjct: 471 KATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEG 530

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRK 532
           F  +G + EA+  F  M  + ++ + VTFL+ + ACS+ G + +G  V H +   + +  
Sbjct: 531 FGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEP 590

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           D+   T + D+  + G L+ A  V   +    +   W A++    +H          +++
Sbjct: 591 DLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKL 650

Query: 592 LDSGIKPNEVTFM----NILWACSHSGSVEE 618
           L+  ++P+ V +     NI  +    G VEE
Sbjct: 651 LE--LEPDNVGYYTLWSNIEASLERWGEVEE 679


>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
 gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
          Length = 730

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 214/711 (30%), Positives = 358/711 (50%), Gaps = 44/711 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMG---SLRSSRLVFDT 54
           L R C   R L    R+H H+L TG H+         LI+ Y + G   SL  +R VFD 
Sbjct: 4   LLRRCGISRSLADGRRVHDHILATG-HFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQ 62

Query: 55  FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             + D   W+ +I  Y       E+I L+ +M  E    +  +  S L ACS   DL  G
Sbjct: 63  MPKKDVVSWSCIIAAYGQAGHCREAINLFQRMDVEP---NEMVIVSTLAACSGAKDLALG 119

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             +H RI+     K   + T++L  Y + G ++ AR VFD+M  +DVVSW+++I ++   
Sbjct: 120 MAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQM 179

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            D  + L+    M++  V+P+ VT ++   AC     L   R IH  V+   +  D  + 
Sbjct: 180 GDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQ 239

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ + MY+K      A   F ++E R   SW +MI+ +  S     A+  F  M     +
Sbjct: 240 NALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEGIK 299

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECE 353
           P+ ++ + VL +C+  G LR  K +H Q+    +    D  +  +L+  YA+CG +   E
Sbjct: 300 PDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAE 359

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           ++   I  +N++SW  +++ Y   G   +ALEL  +M    + PDS  + + + A   VG
Sbjct: 360 RIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVG 419

Query: 414 SLQLGLQIHGHV------IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
            + L  ++H  V      +KI      +Q++LI+MY++CG    A  +F+ I++K++V W
Sbjct: 420 DVGLARKLHARVASSSFMLKIQ-----IQNALINMYARCGSLEEARRVFDGIERKNLVSW 474

Query: 468 NSMICGFYQNGNSLEAINLFHQMYL-NCLEM--------DEVTFLTAIQACSNIGQLEKG 518
           N+M+  + Q+G   EAI LF +M   N   M        D +  +  + A + +G+L +G
Sbjct: 475 NAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEG 534

Query: 519 KWVHHKL------ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           + +H +L      I  G   ++ +  AL  MYA+CG +  A   F  M  R+ V+WS+++
Sbjct: 535 RCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHMRARDTVTWSSLV 594

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM---RIF 629
             Y  HG    A  L++ M   G++P+ VT+++IL +CSH+G + + + +F +M      
Sbjct: 595 AGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCL 654

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
              PD  H+ CMVD+L R+G +  A  ++ +MPF  +   W  LL  C++H
Sbjct: 655 AAWPD--HWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVH 703



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 184/636 (28%), Positives = 316/636 (49%), Gaps = 29/636 (4%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFG---CLDDARKVF 153
           Y S+LR C     L  G +VH  I+  G F +   +   ++  Y + G    L DAR VF
Sbjct: 1   YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D+M  +DVVSWS IIA+Y       E + +F  M    VEP+ + ++S   AC     L 
Sbjct: 61  DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM---DVEPNEMVIVSTLAACSGAKDLA 117

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
              +IH  +L   ++    +G + + MY+KCG +  A   F ++  +   SWTAMI+ + 
Sbjct: 118 LGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFA 177

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G  ++ALE+   M++ + +PN +T +  + +C+   +L  G+ +H  +I  G+  +  
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDIT 237

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL+  YA+     E   V   + +RN +SWN +I+ +A    S  A+ L   M   
Sbjct: 238 -IQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLE 296

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHV---IKIDCKDEFVQSSLIDMYSKCGFKN 450
           G+ PD  S    LSAC + G L+   +IH  +         D  V++SL+  Y+KCG   
Sbjct: 297 GIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLE 356

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F+RI  K+VV W +M+  +  +GN  +A+ L+ +M    ++ D V  L  I A S
Sbjct: 357 AAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGS 416

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G +   + +H ++ S      I I  AL +MYA+CG L+ A+RVFD +  +N+VSW+A
Sbjct: 417 LVGDVGLARKLHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNA 476

Query: 571 MIDCYGMHGQLNDAASLFKQM-------LDSGIKPNEVTFMNILWACSHS--GSVEEGKF 621
           M+  Y  HG   +A +LF +M       ++SG++ +    M ++  C+H+  G + EG+ 
Sbjct: 477 MMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRC 536

Query: 622 Y------FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
                   N   + G   ++     +V + +R G +  A    H M    +   W +L+ 
Sbjct: 537 IHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHMR-ARDTVTWSSLVA 595

Query: 676 GCRIHKRIDVMKTIEKELSVTGTNDNG--YYTLLSN 709
           G   H   +    + +++ + G   +   Y ++L++
Sbjct: 596 GYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNS 631



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 298/618 (48%), Gaps = 30/618 (4%)

Query: 6   SCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C+  + L     +HA +L   L       T L+  YA+ G++  +R VFD     D   
Sbjct: 109 ACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVS 168

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I  +       +++     MI+ +   +   + + + ACSS   L  G K+H  +I
Sbjct: 169 WTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVI 228

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
             G   D  IQ +++  Y +    ++A  VF +M  R+ VSW+S+IA++  +A     + 
Sbjct: 229 DLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMG 288

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI--KIDGPLGNSFIVM 240
           +FH M  EG++PD V+ L +  AC     LR  + IH  +    +    D  + NS +  
Sbjct: 289 LFHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTA 348

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCGDL +AER F +I  +   SWTAM++ Y   G   KALE + KM+    +P+ + L
Sbjct: 349 YAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVL 408

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + V+ + + +G +   + +H ++       +   +  ALI  YA CG + E  +V   I 
Sbjct: 409 LNVIYAGSLVGDVGLARKLHARVASSSFMLKIQ-IQNALINMYARCGSLEEARRVFDGIE 467

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTW-------GLM--PDSFSVASSLSACGN 411
            +N++SWN ++  Y + G  +EA+ L  +M+T        GL   PD       L A   
Sbjct: 468 RKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAG 527

Query: 412 VGSLQLGLQIHGHVIKID-------CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           +G L  G  IH  +  ++         +  + ++L+ MY++CG    A   F  ++ +  
Sbjct: 528 LGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHMRARDT 587

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V W+S++ G+  +G++  AI L+  M+L  ++ D VT+++ + +CS+ G L + +     
Sbjct: 588 VTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFFVS 647

Query: 525 LIS---YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQ 580
           ++         D +    + D+  + G +  A+ V  +M  + +VV+W+ ++ C  +HG 
Sbjct: 648 MVEDHCLAAWPDHW--KCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHGD 705

Query: 581 LNDAASLFKQMLDSGIKP 598
               A   +  +  GI P
Sbjct: 706 AQRGAVAARNAV--GISP 721


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 225/762 (29%), Positives = 388/762 (50%), Gaps = 27/762 (3%)

Query: 4    FRSC-----TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAE-MGSLRSSRLVFDTFKE 57
             R+C     T ++   ++HA +       D   S  L+  Y++  GS+  +  VFD  K 
Sbjct: 248  LRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKF 307

Query: 58   PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS----NFIYPSVLRACSSLGDLGS 113
             +S  W  +I  Y        +  L+  M  E   ++     +   S++ A  SL D G 
Sbjct: 308  RNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL 367

Query: 114  G--EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
               E++  RI K GF +D  + ++++  +  +G +D A+ +F +M  R+ V+ + ++   
Sbjct: 368  VLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGL 427

Query: 172  FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL----RPARSIHGHVLRRKI 227
                   E  K+F  M ++ VE +  +++ L     E  +L    R  + +H ++ R  +
Sbjct: 428  ARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGL 486

Query: 228  KIDG--PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             +D    +GN+ + MY KC  + +A   F  +  + T SW +MIS  + +  F++A+  F
Sbjct: 487  -VDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCF 545

Query: 286  VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
              M      P+  ++I+ L SC+ LGWL  G+ +H +  + G+  +   +  AL+  YAE
Sbjct: 546  HTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS-VSNALLTLYAE 604

Query: 346  CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK-EALELLVQMQTWGLMPDSFSVAS 404
               ++EC+KV   + E + +SWN  I   A+   S  +AL+  ++M   G  P+  +  +
Sbjct: 605  TDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFIN 664

Query: 405  SLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERI-QQK 462
             L+A  +   L LG QIH  ++K    D+  ++++L+  Y KC       ++F R+ +++
Sbjct: 665  ILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERR 724

Query: 463  SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
              V WNSMI G+  +G   +A++L   M     ++D  TF T + AC+++  LE+G  VH
Sbjct: 725  DEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVH 784

Query: 523  HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
               +   +  D+ + +AL DMYAKCG +  A R F+ M  RN+ SW++MI  Y  HG   
Sbjct: 785  ACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQ 844

Query: 583  DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
             A  +F +M   G  P+ VTF+ +L ACSH G V+EG  +F +M  ++G+ P ++H++CM
Sbjct: 845  KALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCM 904

Query: 642  VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHKR-IDVMKTIEKELSVTGTN 699
            VDLL R+GD++     I +MP   N  IW  +L   CR + R  ++ +   K L      
Sbjct: 905  VDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQ 964

Query: 700  DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +   Y LLSN++A  GNW++  + R  M    +KK  G S +
Sbjct: 965  NAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWV 1006



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 194/694 (27%), Positives = 332/694 (47%), Gaps = 20/694 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           +++ ++L     LH  L  TG   D      LI  Y  +G+L S+R +FD   + +   W
Sbjct: 150 YKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSW 209

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS--GEKVHGRI 121
           + LI  Y  N   +E+  L+  +I      ++F   S LRAC   G  G   G ++H  I
Sbjct: 210 SCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFI 269

Query: 122 IKCGFDKDDVIQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            K     D ++   ++  Y +  G +DDA +VFD++  R+ V+W+SII+ Y    D    
Sbjct: 270 CKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSA 329

Query: 181 LKMFHSMVREGVE----PDFVTMLSLAEACGEL--CSLRPARSIHGHVLRRKIKIDGPLG 234
            K+F  M  EGVE    P+  T+ SL  A   L  C L     +   + +     D  +G
Sbjct: 330 FKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVG 389

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ +  +++ G +  A+  F ++  R   +   ++    R    ++A + F +M ++  E
Sbjct: 390 SALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLV-E 448

Query: 295 PNLITLITVLGSCAGLGWLREGK----SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
            N  +L+ +L +      L+EGK     VH  + R G+      +G AL+  Y +C  + 
Sbjct: 449 INSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAID 508

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               V   +  ++ +SWN +IS        +EA+     M+  G++P +FSV S+LS+C 
Sbjct: 509 NACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCS 568

Query: 411 NVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           ++G L LG QIHG   K     D  V ++L+ +Y++    N    +F ++ +   V WNS
Sbjct: 569 SLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNS 628

Query: 470 MICGFYQ-NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
            I    +   + L+A+  F +M       + VTF+  + A S+   L  G  +H  ++ Y
Sbjct: 629 FIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKY 688

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASL 587
            V  D  I+ AL   Y KC  ++  + +F  MSE R+ VSW++MI  Y   G L+ A  L
Sbjct: 689 SVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDL 748

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLS 646
              M+  G K +  TF  +L AC+   ++E G + +  A+R   +E D+   + +VD+ +
Sbjct: 749 VWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRA-CLESDVVVGSALVDMYA 807

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           + G I+ A +    MP   N   W ++++G   H
Sbjct: 808 KCGKIDYASRFFELMPV-RNIYSWNSMISGYARH 840



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 212/434 (48%), Gaps = 32/434 (7%)

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +   +H Q+ + G   +  +    LI  Y   G +    K+   + ++N++SW+ LIS
Sbjct: 156 LYDANHLHLQLYKTGFTDDV-FFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS--LQLGLQIHGHVIKIDC 430
            Y +  M  EA  L   + + GL+P+ F+V S+L AC   GS  ++LG+QIH  + K+ C
Sbjct: 215 GYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274

Query: 431 KDEFVQSS-LIDMYSKC-GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             + + S+ L+ MYS C G  + A+ +F+ I+ ++ V WNS+I  + + G+++ A  LF 
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334

Query: 489 QMYLNCLEM----DEVTFLTAIQACSNIGQ--LEKGKWVHHKLISYGVRKDIYIDTALTD 542
            M +  +E+    +E T  + + A  ++    L   + +  ++   G  +D+Y+ +AL +
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVN 394

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
            +A+ G +  A+ +F  M +RN V+ + ++       Q  +AA +FK+M D  ++ N  +
Sbjct: 395 GFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSES 453

Query: 603 FMNILWACSHSGSVEEGK-----FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            + +L   +   +++EGK      +    R   V+  +     +V++  +   I+ A  +
Sbjct: 454 LVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSV 513

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRID-------VMK---TIEKELSVTGT----NDNGY 703
              MP     S W ++++G   ++R +        MK    +    SV  T    +  G+
Sbjct: 514 FQLMPSKDTVS-WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGW 572

Query: 704 YTLLSNIYAEEGNW 717
            TL   I+ E   W
Sbjct: 573 LTLGRQIHGEGFKW 586


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 189/618 (30%), Positives = 325/618 (52%), Gaps = 32/618 (5%)

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D+D+    +++  Y   G L++ARK+F +   R  ++WSS+I+ Y       E L++F  
Sbjct: 69  DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWE 128

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M  EG  P+  T  S+   C     L   + IH H ++ +   +  +    + MY+KC  
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188

Query: 247 LLSAERTF-VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           +L AE  F +  +KR    WTAM++ Y+++G   KA+E F  M     E N  T  ++L 
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +C  +     G  VH  I+R G G    ++G AL++ Y++CG +S   +++  +   + +
Sbjct: 249 ACGSISACGFGAQVHGCIVRSGFGANV-FVGSALVDMYSKCGDLSNARRMLETMEVDDPV 307

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SWN +I    R+G+ +EAL L   M    +  D F+  S L+    V  ++  + +H  +
Sbjct: 308 SWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLI 367

Query: 426 IKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K   +  + V ++L+DMY+K G+ + A+ +FE++  K V+ W S++ G   NG+  EA+
Sbjct: 368 VKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEAL 427

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF +M +  +  D++     + AC+ +  LE GK VH   +  G+   + +D +L  MY
Sbjct: 428 RLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMY 487

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           AKCG ++ A +VFDSM  ++V++W+A+I  Y  +G+  D                     
Sbjct: 488 AKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD--------------------- 526

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
                  H+G VE G+ YF +M  ++G++P  +HYACM+DLL RSG +  A ++++ M  
Sbjct: 527 -------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAV 579

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
             + ++W ALL  CR+H  +++ +     L      +   Y LLSN+Y+  G W+E  K 
Sbjct: 580 QPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKT 639

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R +M++ G+ K PG S I
Sbjct: 640 RRLMKLRGVSKEPGCSWI 657



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 276/605 (45%), Gaps = 36/605 (5%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I +YA  G L  +R +F          W+ LI  Y       E++ L+ +M  E    +
Sbjct: 78  MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F + SVLR CS    L  G+++H   IK  FD +  + T ++  Y +  C+ +A  +F+
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE 197

Query: 155 -KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
                R+ V W++++  Y  N D  + ++ F  M  EG+E +  T  S+  ACG + +  
Sbjct: 198 LAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG 257

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
               +HG ++R     +  +G++ + MYSKCGDL +A R    +E     SW +MI    
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCV 317

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           R G  ++AL  F  M     + +  T  +VL   + +  +R   SVH  I++ G    Y 
Sbjct: 318 RQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGF-EAYK 376

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL++ YA+ G       V   + +++++SW  L++     G  +EAL L  +M+  
Sbjct: 377 LVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 436

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
           G+ PD   +A+ LSAC  +  L+ G Q+H + +K        V +SL+ MY+KCG    A
Sbjct: 437 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 496

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ ++ + V+ W ++I G+ QNG   +   L          M+EV            
Sbjct: 497 NKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEV------------ 544

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAM 571
                          YG++        + D+  + G L  A+ + + M+ + +   W A+
Sbjct: 545 ---------------YGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 589

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           +    +HG +         + +  ++P N V ++ +    S +G  EE       M++ G
Sbjct: 590 LAACRVHGNVELGERAANNLFE--LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 647

Query: 631 V--EP 633
           V  EP
Sbjct: 648 VSKEP 652



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 221/482 (45%), Gaps = 48/482 (9%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP-DSFMWAVLIK 68
           L K  ++HAH + T    +    T L++ YA+   +  +  +F+   +  +  +W  ++ 
Sbjct: 154 LEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVT 213

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  N    ++I  +  M  E    + F +PS+L AC S+   G G +VHG I++ GF  
Sbjct: 214 GYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGA 273

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  + ++++  Y + G L +AR++ + M   D VSW+S+I          E L +F  M 
Sbjct: 274 NVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMH 333

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
              ++ D  T  S+      +  +R A S+H  +++   +    + N+ + MY+K G   
Sbjct: 334 LRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFD 393

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A   F K+  +   SWT++++    +G +++AL  F +M  +   P+ I +  VL +CA
Sbjct: 394 YAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACA 453

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L  L  GK VH   ++ G+G     +  +L+  YA+CG + +  KV  ++  +++++W 
Sbjct: 454 ELTVLEFGKQVHANFLKSGLGSSLS-VDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWT 512

Query: 369 MLISEYARKGMSK-------------------------------------------EALE 385
            LI  YA+ G  +                                           EA E
Sbjct: 513 ALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKE 572

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSK 445
           LL QM    + PD+    + L+AC   G+++LG +   ++ +++ K+      L ++YS 
Sbjct: 573 LLNQM---AVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSA 629

Query: 446 CG 447
            G
Sbjct: 630 AG 631



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 142/330 (43%), Gaps = 29/330 (8%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    ++R    +H+ ++ TG       +  L++ YA+ G    +  VF+   + D   W
Sbjct: 351 FSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISW 410

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             L+   + N  +EE++ L+ +M          +  +VL AC+ L  L  G++VH   +K
Sbjct: 411 TSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLK 470

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD------- 176
            G      +  S++  Y + GC++DA KVFD M  +DV++W+++I  Y  N         
Sbjct: 471 SGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGL 530

Query: 177 VSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           V  G   F SM    G++P       + +  G    L  A+ +   +    ++ D  +  
Sbjct: 531 VEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM---AVQPDATVWK 587

Query: 236 SFIVMYSKCGDLLSAERT---FVKIEKRCTTSWTAMISCYNRSGWFQKALES--FVKMLE 290
           + +      G++   ER      ++E +    +  + + Y+ +G +++A ++   +K+  
Sbjct: 588 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 647

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVH 320
           V +EP             G  W+     VH
Sbjct: 648 VSKEP-------------GCSWIEMSSKVH 664


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 213/675 (31%), Positives = 346/675 (51%), Gaps = 8/675 (1%)

Query: 73  NNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           N+F+ E++  +    +  +  I    Y S++ ACSS   L  G K+H  I+      D +
Sbjct: 41  NSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI 100

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +   IL  YG+ G L DAR+VFD M  R++VS++S+I  Y  N   +E + ++  M++  
Sbjct: 101 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQAD 160

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           + PD     S+ +AC     +   + +H  V++ +        N+ I MY +   +  A 
Sbjct: 161 LVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 220

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGL 310
           + F  I  +   SW+++I+ +++ G+  +AL    +ML      PN     + L +C+ L
Sbjct: 221 KVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL 280

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
                G  +H   I+  +       G +L + YA CG +    +V + I   +  SWN++
Sbjct: 281 LRPDYGSQIHGLCIKLELTGNA-IAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVI 339

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
           I+  A  G + EA+ +  +M+  G +PD+ S+ S L A     +L  G+QIH  +IK   
Sbjct: 340 IAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGF 399

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFH 488
             D  V +SL+ MY+ C      + LFE  + K+  V WN+++    Q+   +E + LF 
Sbjct: 400 LADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFK 459

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            M ++  E D +T    ++ C  I  L+ G  VH      G+  + +I   L DMYAKCG
Sbjct: 460 LMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCG 519

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L+ A+R+FDSM   +VVSWS +I  Y   G   +A  LF++M  SGI+PN VTF+ +L 
Sbjct: 520 SLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLT 579

Query: 609 ACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSH G VEEG K Y       G+ P  +H +C+VDLL+R+G +  A + I  M    + 
Sbjct: 580 ACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDV 639

Query: 668 SIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
            +W  LL+ C+    +D+  K  E  L +   N    + LL +++A  GNW++   +RS 
Sbjct: 640 VVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTA-HVLLCSMHASSGNWEDAALLRSS 698

Query: 727 MEVTGLKKVPGYSTI 741
           M+   +KK+PG S I
Sbjct: 699 MKKHDVKKIPGQSWI 713



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 182/644 (28%), Positives = 319/644 (49%), Gaps = 18/644 (2%)

Query: 1   MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +C++ R L    ++H H+L +   YD   +  ++  Y + GSLR +R VFD   E
Sbjct: 68  ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 127

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   +  +I  Y  N    E+I LY KM++       F + S+++AC+  GD+  G+++
Sbjct: 128 RNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQL 187

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H ++IK       + Q +++  Y  F  + DA KVF  + ++D++SWSSIIA +      
Sbjct: 188 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFE 247

Query: 178 SEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRP--ARSIHGHVLRRKIKIDGPLG 234
            E L     M+  GV  P+     S  +AC  L  LRP     IHG  ++ ++  +   G
Sbjct: 248 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL--LRPDYGSQIHGLCIKLELTGNAIAG 305

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            S   MY++CG L SA R F +IE+  T SW  +I+    +G+  +A+  F +M      
Sbjct: 306 CSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFI 365

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ I+L ++L +      L +G  +H  II+ G   +      +L+  Y  C  +  C  
Sbjct: 366 PDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCN-SLLTMYTFCSDLYCCFN 424

Query: 355 VIHAIGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +      + + +SWN +++   +     E L L   M      PD  ++ + L  C  + 
Sbjct: 425 LFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 484

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           SL+LG Q+H +  K     ++F+++ LIDMY+KCG    A  +F+ +    VV W+++I 
Sbjct: 485 SLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIV 544

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVR 531
           G+ Q+G   EA+ LF +M  + +E + VTF+  + ACS++G +E+G  ++  +   +G+ 
Sbjct: 545 GYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGIS 604

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
                 + + D+ A+ G L  A+R  D M  E +VV W  ++      G ++ A    + 
Sbjct: 605 PTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAEN 664

Query: 591 MLDSGIKPNEVTFMNILWACSH--SGSVEEGKFYFNAMRIFGVE 632
           +L   I P   T  ++L    H  SG+ E+     ++M+   V+
Sbjct: 665 ILK--IDPFNST-AHVLLCSMHASSGNWEDAALLRSSMKKHDVK 705


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/530 (35%), Positives = 297/530 (56%), Gaps = 2/530 (0%)

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           R    IH  ++   ++ +G L    +   S  G +  A + F +        W A+I  Y
Sbjct: 70  RHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSY 129

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           +R+  ++  +E +  M      P+  T   VL +C  L        +H QII+ G G + 
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDV 189

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            ++   L+  YA+CG +   + V   +  R I+SW  +IS YA+ G + EAL +  QM+ 
Sbjct: 190 -FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRN 248

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNL 451
            G+ PD  ++ S L A  +V  L+ G  IHG VIK+  +DE  +  SL   Y+KCG   +
Sbjct: 249 NGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTV 308

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A   F++++  +V+MWN+MI G+ +NG++ EA+NLFH M    ++ D VT  +A+ A + 
Sbjct: 309 AKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQ 368

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G LE  +W+   +       DI+++T+L DMYAKCG ++ A+RVFD  S+++VV WSAM
Sbjct: 369 VGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAM 428

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I  YG+HGQ  +A +L+  M  +G+ PN+VTF+ +L AC+HSG V+EG   F+ M+ F +
Sbjct: 429 IMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEI 488

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            P  +HY+C+VDLL R+G +  A   I  +P     S+WGALL+ C+I++ + + +    
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAAN 548

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +L      + G+Y  LSN+YA    WD    VR +M   GL K  GYS I
Sbjct: 549 KLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVI 598



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 253/480 (52%), Gaps = 9/480 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  + T+ R L ++H  L+++GL ++    T+L+   + +G +  +R +FD F  PD FM
Sbjct: 62  LIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFM 121

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+ Y  NN + +++ +Y  M         F +P VL+AC+ L D G    +HG+II
Sbjct: 122 WNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQII 181

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K GF  D  +Q  ++  Y + G +  A+ VFD +  R +VSW+SII+ Y  N    E L+
Sbjct: 182 KYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALR 241

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           MF  M   GV+PD++ ++S+  A  ++  L   RSIHG V++  ++ +  L  S    Y+
Sbjct: 242 MFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYA 301

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG +  A+  F +++      W AMIS Y ++G  ++A+  F  M+    +P+ +T+ +
Sbjct: 302 KCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRS 361

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
            + + A +G L   + +   + +   G +  ++  +LI+ YA+CG +    +V     ++
Sbjct: 362 AVLASAQVGSLELAQWMDDYVSKSNYGSDI-FVNTSLIDMYAKCGSVEFARRVFDRNSDK 420

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++ W+ +I  Y   G   EA+ L   M+  G+ P+  +    L+AC + G ++ G ++ 
Sbjct: 421 DVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELF 480

Query: 423 GHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQ 476
            H +K   I  ++E   S ++D+  + G+   A     +I  +  V +W +++  C  Y+
Sbjct: 481 -HCMKDFEIVPRNEH-YSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYR 538


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 186/537 (34%), Positives = 302/537 (56%), Gaps = 8/537 (1%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMY---SKCGDLLSAERTFVKIEKRCTTSWTA 267
           S+   +  H  +LR  + +  PL +S ++ +   S  GDL  A + F +++         
Sbjct: 23  SISKTKQAHALLLRTHL-LHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNT 81

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  Y RS    +A+  +  M+E     +  T   VL +CA LG ++ G+  HC++++ G
Sbjct: 82  MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
            G +  ++  ALI+FY  CG       V      R++++WN++I+ +  KG+S++A +LL
Sbjct: 142 FGSDL-FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200

Query: 388 VQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSK 445
            +M     L PD  ++ S + AC  +G+L+ G  +H +  ++   +   V ++++DMY K
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C     A  +F RI++K V+ W SM+ G  ++G   EA+ LF +M LN +E+DE+T +  
Sbjct: 261 CDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGV 320

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + AC+  G L++GK++H  +  + +  D+ ++TAL DMYAKCG +  A +VF  M  RNV
Sbjct: 321 LSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNV 380

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            +W+A+I    MHG   DA SLF QM    + P++VTF+ +L ACSH+G V+EG   F A
Sbjct: 381 FTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQA 440

Query: 626 MR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M+  F +EP ++HY C+VDLL R+  ++ A   I +MP  AN  +W  LL  CR     D
Sbjct: 441 MKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFD 500

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + I + +     +  G Y +LSN+YA    WD   K+R  M+  G++K PG S I
Sbjct: 501 LAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWI 557



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/421 (33%), Positives = 228/421 (54%), Gaps = 10/421 (2%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           CT++ K  + HA LL T L ++P  S++LI   + +  G L  +R +F   + PD F+  
Sbjct: 21  CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I+ Y  +    E++ LY+ M+     + N+ YP VL AC+ LG +  G + H  ++K 
Sbjct: 81  TMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKN 140

Query: 125 GFDKDDVIQTSILCTY---GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           GF  D  +  +++  Y   G FGC  D   VFD+ T RDVV+W+ +I ++ +     +  
Sbjct: 141 GFGSDLFVINALIQFYHNCGSFGCACD---VFDESTVRDVVTWNIMINAHLNKGLSEKAF 197

Query: 182 KMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            +   M + + + PD VTM+SL  AC +L +L   + +H +     +  +  + N+ + M
Sbjct: 198 DLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDM 257

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KC D+ SA+  F +I ++   SWT+M+S   +SG+FQ+AL  F KM   K E + ITL
Sbjct: 258 YCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITL 317

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           + VL +CA  G L +GK +H  I +  +  +   L  AL++ YA+CG +    +V   + 
Sbjct: 318 VGVLSACAQTGALDQGKYIHLLIDKFEINCDL-VLETALVDMYAKCGSIDLALQVFRRMR 376

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            RN+ +WN LI   A  G  ++A+ L  QM+   LMPD  +  + L AC + G +  GL 
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLA 436

Query: 421 I 421
           +
Sbjct: 437 M 437



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +C  L  L R   LH++    GL  +   +  +++ Y +   + S++ VF+  +E
Sbjct: 217 VSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIRE 276

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            D   W  ++     + +F+E++ L+ KM   +  +       VL AC+  G L  G+ +
Sbjct: 277 KDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYI 336

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  I K   + D V++T+++  Y + G +D A +VF +M  R+V +W+++I     +   
Sbjct: 337 HLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHG 396

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            + + +F  M  + + PD VT ++L  AC
Sbjct: 397 EDAISLFDQMEHDKLMPDDVTFIALLCAC 425


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 208/645 (32%), Positives = 340/645 (52%), Gaps = 29/645 (4%)

Query: 109 GDLGSGEKVHGRIIKCGF-DKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSS 166
           GDL  G  +H R+++    D+D V+  S+L  Y   G +  AR VFD M   RD+VSW++
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC--GEL-CSLRPARSIHGHVL 223
           + +    N      L +   M+  G+ P+  T+ + A AC   EL C +        H  
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVH-- 179

Query: 224 RRKIKI---DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
             K+ +   D  +G++ I M ++ GDL SA + F  + ++    WT +IS Y +    ++
Sbjct: 180 --KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEE 237

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           A+E F+  LE   EP+  T+ +++ +C  LG +R G  +H   +R G+  +   +   L+
Sbjct: 238 AVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDA-CVSCGLV 296

Query: 341 EFYAECG---KMSECEKVIHAIGERNILSWNMLISEYARKGMSK-EALELLVQMQTWGLM 396
           + YA+      M    KV   + + +++SW  LIS Y + G+ + + + L  +M    + 
Sbjct: 297 DMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIK 356

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           P+  + +S L +C ++     G Q+H HVIK +      V ++L+ MY++ G    A  +
Sbjct: 357 PNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRV 416

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F ++ ++S      MI    +  +      L H++    + +   TF + I A +++G L
Sbjct: 417 FNQLYERS------MIPCITEGRD----FPLDHRIVRMDVGISSSTFASLISAAASVGML 466

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
            KG+ +H   +  G   D ++  +L  MY++CG L+ A R F+ + +RNV+SW++MI   
Sbjct: 467 TKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGL 526

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             HG    A SLF  M+ +G+KPN+VT++ +L ACSH G V EGK YF +M R  G+ P 
Sbjct: 527 AKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPR 586

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           ++HYACMVDLL+RSG ++ A + I+ MP  A+  +W  LL  CR H  I+V +   K + 
Sbjct: 587 MEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVV 646

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
                D   Y LLSN+YA+ G WDE  ++RS M    L K  G S
Sbjct: 647 ELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLS 691



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 253/543 (46%), Gaps = 50/543 (9%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D    + LI+  A  G L S+R VFD   E    +W +LI  Y+     EE++ L+   +
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG--- 144
            +      +   S++ AC+ LG +  G ++H   ++ G   D  +   ++  Y +     
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG--LKMFHSMVREGVEPDFVTMLSL 202
            +D A KVF++M   DV+SW+++I+ Y  +  V E   + +F  M+ E ++P+ +T  S+
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSG-VQENKVMALFGEMLNESIKPNHITYSSI 365

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            ++C  +      R +H HV++        +GN+ + MY++ G +  A R F ++ +R  
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER-- 423

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
               +MI C      F   L+  +  ++V    +  T  +++ + A +G L +G+ +H  
Sbjct: 424 ----SMIPCITEGRDF--PLDHRIVRMDVGISSS--TFASLISAAASVGMLTKGQQLHAM 475

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            ++ G G +  ++  +L+  Y+ CG + +  +  + + +RN++SW  +IS  A+ G ++ 
Sbjct: 476 SLKAGFGSDR-FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAER 534

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           AL L   M   G+ P+  +  + LSAC +VG ++ G              E+ +S   D 
Sbjct: 535 ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREG-------------KEYFRSMQRD- 580

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
                     + L  R++      +  M+    ++G   EA+   ++M    L+ D + +
Sbjct: 581 ----------HGLIPRMEH-----YACMVDLLARSGIVKEALEFINEM---PLKADALVW 622

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            T + AC +   +E G+     ++    R D      L+++YA  G      R+  +M +
Sbjct: 623 KTLLGACRSHDNIEVGEITAKNVVELEPR-DPAPYVLLSNLYADAGLWDEVARIRSAMRD 681

Query: 563 RNV 565
            N+
Sbjct: 682 NNL 684



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 213/456 (46%), Gaps = 57/456 (12%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMG---SLRSSRLVFDTFK 56
           +  +CT L   R   +LH+  L  GL  D   S  L++ YA+     ++  +  VF+   
Sbjct: 260 MISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMP 319

Query: 57  EPDSFMWAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           + D   W  LI  Y+ +   E  ++ L+ +M+ E    ++  Y S+L++C+S+ D  SG 
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGR 379

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VH  +IK        +  +++  Y E GC+++AR+VF+++  R ++             
Sbjct: 380 QVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPC----------- 428

Query: 176 DVSEG--LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
            ++EG    + H +VR  V     T  SL  A   +  L   + +H   L+     D  +
Sbjct: 429 -ITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFV 487

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            NS + MYS+CG L  A R+F +++ R   SWT+MIS   + G+ ++AL  F  M+    
Sbjct: 488 SNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV 547

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSEC 352
           +PN +T I VL +C+ +G +REGK     + R  G+ P         +E YA        
Sbjct: 548 KPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPR--------MEHYA-------- 591

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
                            ++   AR G+ KEALE + +M    L  D+    + L AC + 
Sbjct: 592 ----------------CMVDLLARSGIVKEALEFINEMP---LKADALVWKTLLGACRSH 632

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
            ++++G     +V++++ +D      L ++Y+  G 
Sbjct: 633 DNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGL 668


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 219/750 (29%), Positives = 371/750 (49%), Gaps = 67/750 (8%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LF  C N   L    +LHA +  +G   +    +RLI+ Y   G + ++  +FD     +
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS-LGDLGSGEKVH 118
              W  +I   +      + + L+  MI E  T     + SVLRACS         E++H
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            +II  GF    ++   ++  Y + G +D A+ VF+++  +D VSW ++I+    N    
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E + +F  M +  V P      S+  AC ++   +    +HG +++  +  +  + N+ +
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +YS+ G+L++AE+ F K+ +R   S+ ++IS   + G+  +AL+ F KM     +P+ +
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCV 315

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T+ ++L +CA +G   +GK +H  +I+ GM  +    G +L++ Y +C  +    +    
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEG-SLLDLYVKCFDIETAHEYFLT 374

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
               N++ WN+++  Y + G   E+  + +QMQ  GLMP+ ++  S L  C ++G+L LG
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            QIH  VIK   + + +V S LIDMY+K G  + A  + +R++++ VV W +MI G+ Q+
Sbjct: 435 EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQH 494

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
               EA+ LF +M    +  D + F +AI AC+ I  L +G+ +H +    G  +D+ I 
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554

Query: 538 TALTD-----MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            AL       +Y+KCG ++ A+R F  M E+NVVSW+AMI  Y  HG  ++A SLF++M 
Sbjct: 555 NALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMK 614

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
             G+ PN VTF+  +                       +EPD   +  ++   +   +IE
Sbjct: 615 QLGLMPNHVTFVGEM----------------------PIEPDAMIWRTLLSACTVHKNIE 652

Query: 653 -GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
            G F   H                          +  +E E S T       Y LLSN+Y
Sbjct: 653 IGEFAARH--------------------------LLELEPEDSAT-------YVLLSNMY 679

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A  G WD   + R +M+  G+KK PG S I
Sbjct: 680 AVSGKWDYRDRTRQMMKDRGVKKEPGRSWI 709



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 252/496 (50%), Gaps = 4/496 (0%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G+  +  T L L E C    SL  A+ +H  + +     +  LG+  I +Y   G+
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + +A + F  I     + W  +IS         + L  F  M+     P+  T  +VL +
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 307 CAG-LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           C+G     +  + +H +II  G G       P LI+ Y++ G +   + V   +  ++ +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNP-LIDLYSKNGHVDLAKLVFERLFLKDSV 179

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SW  +IS  ++ G   EA+ L  QM    ++P  +  +S LSAC  +   +LG Q+HG +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 426 IKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K     E FV ++L+ +YS+ G    A  +F ++ ++  + +NS+I G  Q G S  A+
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF +M L+C++ D VT  + + AC+++G   KGK +H  +I  G+  D+ I+ +L D+Y
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
            KC D++TA   F +    NVV W+ M+  YG  G L+++  +F QM   G+ PN+ T+ 
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +IL  C+  G+++ G+     +   G + ++   + ++D+ ++ G+++ A  ++  +   
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-E 478

Query: 665 ANGSIWGALLNGCRIH 680
            +   W A++ G   H
Sbjct: 479 EDVVSWTAMIAGYTQH 494


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 194/616 (31%), Positives = 329/616 (53%), Gaps = 18/616 (2%)

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           Y   G +  AR+ FD M  R+VVSWS++IA+Y      ++ L++F  M  EGV+ + +T 
Sbjct: 2   YNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITF 61

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAERTFVKIE 258
           +S+ +AC  L ++   +SIH  ++   +  D   LGN+ + MY KCG++  A   F ++E
Sbjct: 62  VSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 121

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
            + T +W  MI+  +R   +++A     +M      PN ITL++V+ +CA +  +  G+ 
Sbjct: 122 AKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRI 181

Query: 319 VHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
           VH +I+  G G E D  +  AL+  Y +CGK+      +  I  R+ +SW  L++ YAR 
Sbjct: 182 VH-EIV-AGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 239

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQ 436
           G  K A+ ++ +M   G+  DSF+  + L +C  + +L LG +IH  + +   + D  +Q
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
           ++L+DMY KCG  + A   F+R++  + V +WN+++  +       E + +F +M L  +
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV--RKDI----YIDTALTDMYAKCGD 549
             D VTFL+ + AC+++  L  G+  H +++  G+  R+ +     + T++ +MYAKCG 
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 419

Query: 550 LQTAQRVFDSMSE---RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           L  A+  F         +VV+WSAM+  Y   G   +A   F  M   G+KP+ V+F++ 
Sbjct: 420 LADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSA 479

Query: 607 LWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           +  CSHSG V E   +F ++R   G+ P   H+AC+VDLLSR+G I  A  ++   P  A
Sbjct: 480 IAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGA 539

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           + S W  LL+ CR +   D+ +       +        Y+LL++++     WD+    R 
Sbjct: 540 HHSTWMTLLSACRTYG--DLERARRVAARLASLRSGSAYSLLASVFCLSRKWDDVRNARQ 597

Query: 726 IMEVTGLKKVPGYSTI 741
            +   G    PG S I
Sbjct: 598 SLVERGFITQPGCSWI 613



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 252/493 (51%), Gaps = 15/493 (3%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y   GS+  +R  FD     +   W+ +I  Y       +++ L+ +M  E    +   +
Sbjct: 2   YNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI-QTSILCTYGEFGCLDDARKVFDKMT 157
            SVL AC+SLG +  G+ +H RI+  G   DDVI   +I+  YG+ G +D AR+VF++M 
Sbjct: 62  VSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +++ V+W+++IA+   +    E   +   M  +G+ P+ +T++S+ +AC  + S+   R 
Sbjct: 122 AKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRI 181

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H  V    ++ D  + N+ + +Y KCG L +A      IE R   SWT +++ Y R G 
Sbjct: 182 VHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 241

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLG 336
            ++A+    +M     + +  T + +L SC  +  L  G+ +H ++   G+  E D  L 
Sbjct: 242 GKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGI--ELDPVLQ 299

Query: 337 PALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            AL++ Y +CG      +    + + R++  WN L++ Y  +   KE L +  +M   G+
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-------EFVQSSLIDMYSKCGF 448
            PD+ +  S L AC ++ +L LG   H  +++    D       + + +S+I+MY+KCG 
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 419

Query: 449 KNLAYLLF---ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
              A   F    R +   VV W++M+  + Q G S EA+  F+ M    ++ D V+F++A
Sbjct: 420 LADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSA 479

Query: 506 IQACSNIGQLEKG 518
           I  CS+ G + + 
Sbjct: 480 IAGCSHSGLVREA 492



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 212/389 (54%), Gaps = 2/389 (0%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY++CG ++ A R F  +  R   SW+AMI+ Y + G    ALE FV+M     + N IT
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            ++VL +CA LG +  GKS+H +I+  G+  +   LG  ++  Y +CG++    +V   +
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             +N ++WN +I+  +R    KEA  LL +M   GL P+  ++ S + AC  + S+  G 
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H  V     + D  V ++L+++Y KCG    A    E I+ +  + W +++  + ++G
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
           +   AI +  +M    +++D  TF+  +++C  I  L  G+ +H +L   G+  D  + T
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           AL DMY KCG+   A+R FD M + R+V  W+A++  Y +  Q  +   +F +M   G+ 
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVA 360

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           P+ VTF++IL AC+   ++  G+   + M
Sbjct: 361 PDAVTFLSILDACASLAALGLGRLTHSRM 389



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 223/459 (48%), Gaps = 20/459 (4%)

Query: 16  LHAHLLVTGLHYDPPA-STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +H  ++  GL  D       ++  Y + G +  +R VF+  +  ++  W  +I     ++
Sbjct: 80  IHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTMIAACSRHD 139

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            ++E+  L  +M  +    +     SV+ AC+ +  +  G  VH  +   G + D+ +  
Sbjct: 140 RYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVAN 199

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  YG+ G L  AR   + + +RD +SW++++A+Y  +      + +   M  EGV+ 
Sbjct: 200 ALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKL 259

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T ++L E+C  + +L     IH  +    I++D  L  + + MY KCG+  +A R F
Sbjct: 260 DSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAF 319

Query: 255 VKIEK-RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
            ++   R  T W A+++ Y      ++ L  F +M      P+ +T +++L +CA L  L
Sbjct: 320 DRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAAL 379

Query: 314 REGKSVHCQIIRKGM-----GPEYDYLGPALIEFYAECGKMSECEKVIHAIGER----NI 364
             G+  H +++ +G+         D L  ++I  YA+CG +++  K   A   R    ++
Sbjct: 380 GLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADA-KAEFAKARRARASDV 438

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI--- 421
           ++W+ +++ Y++ G+S+EAL     MQ  G+ PDS S  S+++ C + G ++  +     
Sbjct: 439 VAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTS 498

Query: 422 --HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
             H H I      E   + L+D+ S+ G+   A  L  R
Sbjct: 499 LRHDHGI---APTEAHFACLVDLLSRAGWIREAEALMRR 534


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 204/649 (31%), Positives = 347/649 (53%), Gaps = 17/649 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS- 158
           +L + +  GDL  G  +H R+++    D D V+  S+L  Y + G ++ AR+VFD+M   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           RD+VSW+++ +    N    E L++   M+  G+ P+  T+ + A AC      R A  +
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 219 -HGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
             G VL+      D  +G + I M+++ GDL++A+R F  + +R +  WT +I+ Y ++G
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG 225

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
              K +E F+ ML+   EP+  ++ +++ +C  LG +R G+ +H   +R G+  +   + 
Sbjct: 226 CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSD-SCVS 284

Query: 337 PALIEFYAECG---KMSECEKVIHAIGERNILSWNMLISEYARKGMSKE-ALELLVQMQT 392
             L++ YA+      M    KV   +   N++SW  LIS Y + G+ +   + L  +M  
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNL 451
             + P+  + ++ L AC N+     G QIH HV+K        V ++L+ MY++ G    
Sbjct: 345 ESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEE 404

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A   F+++ + +++  +  +     N +    I            +   TF + + A ++
Sbjct: 405 ARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDD------GVSTFTFASLLSAAAS 458

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G L KG+ +H   +  G R D  I  +L  MYA+CG L+ A R FD M + NV+SW+++
Sbjct: 459 VGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSI 518

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
           I     HG    A S+F  M+ +G+KPN+VT++ +L ACSH G V+EGK +F +M +  G
Sbjct: 519 ISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHG 578

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           + P ++HYAC+VDLL+RSG +E A + I+ MP  A+  +W  LL+ CR +   ++ +   
Sbjct: 579 LLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAA 638

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             +      D   Y LLSN+YA+ G WDE  ++RS+M    L K  G S
Sbjct: 639 NHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLS 687



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 289/585 (49%), Gaps = 22/585 (3%)

Query: 9   NLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEPDSFMWAVL 66
           +LR    LH  LL +  L  D   +  L+  Y++ G++ ++R VFD      D   W  +
Sbjct: 55  DLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAM 114

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC--SSLGDLGSGEKVHGRIIKC 124
             C   N    ES+ L  +M+      + F   +  RAC    L  L  G  V G ++K 
Sbjct: 115 ASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGG-VVLGFVLKT 173

Query: 125 GFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
           GF   DV +  +++  +   G L  A++VFD +  R  V W+ +I  Y      S+ +++
Sbjct: 174 GFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVEL 233

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M+ +G EPD  +M S+  AC EL S+R  + +H   LR  +  D  +    + MY+K
Sbjct: 234 FLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAK 293

Query: 244 CG---DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ-KALESFVKMLEVKEEPNLIT 299
                 +  A + F  + +    SWTA+IS Y +SG  +   +  F +ML     PN IT
Sbjct: 294 LKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHIT 353

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
              +L +CA L     G+ +H  +++  +    + +G AL+  YAE G M E  K    +
Sbjct: 354 YSNLLKACANLSDQDSGRQIHAHVLKTSIA-HVNVVGNALVSMYAESGCMEEARKAFDQL 412

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E NILS +  + E  R   S  +     +++       +F+ AS LSA  +VG L  G 
Sbjct: 413 YETNILSMSPDV-ETERNNASCSS-----KIEGMDDGVSTFTFASLLSAAASVGLLTKGQ 466

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           ++H   +K   + D+ + +SL+ MY++CG+   A   F+ ++  +V+ W S+I G  ++G
Sbjct: 467 KLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHG 526

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYI 536
            + +A+++FH M L  ++ ++VT++  + ACS++G +++GK  H + +   +G+   +  
Sbjct: 527 YAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE-HFRSMQKDHGLLPRMEH 585

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQ 580
              + D+ A+ G ++ A++  + M  + + + W  ++     +G 
Sbjct: 586 YACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGN 630



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 221/454 (48%), Gaps = 49/454 (10%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRS---SRLVFDTFK 56
           +  +CT L   R   +LH+  L  GL  D   S  L++ YA++   RS   +R VF T  
Sbjct: 252 MISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMP 311

Query: 57  EPDSFMWAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
             +   W  LI  Y+ +   E +++ L+ +M+ E    ++  Y ++L+AC++L D  SG 
Sbjct: 312 RHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGR 371

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           ++H  ++K      +V+  +++  Y E GC+++ARK FD++   +++S S  + +  +NA
Sbjct: 372 QIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNA 431

Query: 176 DVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
             S  ++       +GV    F ++LS A + G L      + +H   ++   + D  + 
Sbjct: 432 SCSSKIEGMD----DGVSTFTFASLLSAAASVGLLTK---GQKLHALSMKAGFRSDQGIS 484

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           NS + MY++CG L  A R F +++     SWT++IS   + G+ ++AL  F  M+    +
Sbjct: 485 NSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVK 544

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           PN +T I VL +C+ +G ++EGK  H + ++K  G     L P + E YA          
Sbjct: 545 PNDVTYIAVLSACSHVGLVKEGKE-HFRSMQKDHG-----LLPRM-EHYA---------- 587

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                          ++   AR G+ +EA + + +M       D+    + LSAC   G+
Sbjct: 588 --------------CIVDLLARSGLVEEARQFINEMPC---KADALVWKTLLSACRTYGN 630

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
            ++G     HVI ++ +D      L ++Y+  G 
Sbjct: 631 TEIGEIAANHVINLEPRDPAPYVLLSNLYADAGL 664



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 245/543 (45%), Gaps = 60/543 (11%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           LI+ +A  G L +++ VFD   E  S +W +LI  Y+      + + L+  M+ +     
Sbjct: 186 LIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPD 245

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG---CLDDARK 151
            +   S++ AC+ LG +  G+++H   ++ G   D  +   ++  Y +      ++ ARK
Sbjct: 246 GYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARK 305

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEG--LKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           VF  M   +V+SW+++I+ Y  +  V E   + +F  M+ E + P+ +T  +L +AC  L
Sbjct: 306 VFKTMPRHNVMSWTALISGYVQSG-VQENNVMALFREMLNESIRPNHITYSNLLKACANL 364

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
                 R IH HVL+  I     +GN+ + MY++ G +  A + F ++ +    S +  +
Sbjct: 365 SDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV 424

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
                +      +E       + +  +  T  ++L + A +G L +G+ +H   ++ G  
Sbjct: 425 ETERNNASCSSKIEG------MDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFR 478

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   +  +L+  YA CG + +  +    + + N++SW  +IS  A+ G +K+AL +   
Sbjct: 479 SDQG-ISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHD 537

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQ-------IHGHVIKIDCKDEFVQSSLIDM 442
           M   G+ P+  +  + LSAC +VG ++ G +        HG + +++       + ++D+
Sbjct: 538 MILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRME-----HYACIVDL 592

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
            ++ G       L E  +Q      N M C                       + D + +
Sbjct: 593 LARSG-------LVEEARQ----FINEMPC-----------------------KADALVW 618

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            T + AC   G  E G+   + +I+   R D      L+++YA  G      R+   M +
Sbjct: 619 KTLLSACRTYGNTEIGEIAANHVINLEPR-DPAPYVLLSNLYADAGLWDEVARIRSLMRD 677

Query: 563 RNV 565
           +N+
Sbjct: 678 KNL 680


>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
 gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
          Length = 825

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 200/708 (28%), Positives = 354/708 (50%), Gaps = 17/708 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +  +G   D      L+  Y   GS+  ++ VFD     +   W  +I  +   + 
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSL 182

Query: 76  FEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E      +++  +   SNF+ Y ++++ACS    L  G  +H R ++     +  +  
Sbjct: 183 --EQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN 240

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  YG  G L+DAR +F  M  RD+++W+++I  Y  +  V E + ++  M++EG +P
Sbjct: 241 ALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKP 300

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D VT ++L        +L   + +H H++   + I+  LG + + MYSKC  L      F
Sbjct: 301 DKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLF 360

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            K+ +R   SW  M++ Y + G  +KA++    M     +P+ +T + +L  C G   L+
Sbjct: 361 EKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLK 420

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+ VH   I +G       L  +L+  Y  CG++ + E V   I +RN++SW  +++ Y
Sbjct: 421 LGRKVH-GWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAY 479

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDE 433
           +R+     AL L   +   G+ P   +   +L AC    +L  G  +H   ++  +  D 
Sbjct: 480 SRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDV 539

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            + S+L+ MY +CG    A   F+  + +K+ V W++MI  F Q+G   E +     M  
Sbjct: 540 SLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQ 599

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY------IDTALTDMYAK 546
             L+M   TF + + ACSN+  L +GK +H    SY VR+  +      +  +L  MY K
Sbjct: 600 QGLDMSPATFASTLSACSNLADLREGKRIH----SY-VRERRFDTEAATVTNSLVTMYGK 654

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG L  A+ VF++   ++++ W+A+I  Y  HGQ  DA  LF +M   G+ P+ VTF+ I
Sbjct: 655 CGSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCI 714

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L  CSH G ++EG + + +M   G+EP   +YAC++DLL R+G ++ A + I S+     
Sbjct: 715 LSVCSHGGLLDEGVYAYASMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPA 774

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
                +LL+ C+ H  +   +   + +       +  + +LS+IY+ +
Sbjct: 775 IETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSAD 822



 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 179/630 (28%), Positives = 333/630 (52%), Gaps = 7/630 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L ++C  L+ L    RLH+ ++   L         LI +Y +  SL  +   F+     +
Sbjct: 6   LLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 65

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W  +I     ++    +I+L  +M+ E     N    + L +C +   L +G+ +HG
Sbjct: 66  VYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHG 125

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I + G   D +++ +++  YG  G +DDA++VFD M +R+V++W+++I ++ + + + +
Sbjct: 126 LIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETS-LEQ 184

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             K+F  M  EG + +FVT ++L +AC +   L     +H   +     ++ PL N+ I 
Sbjct: 185 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 244

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY +CG L  A   F  + +R   +W A+I+ Y + G  ++A+  +  ML+   +P+ +T
Sbjct: 245 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVT 304

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            + +L    G   L + K VH  I+  G+      LG AL+  Y++C  + +   +   +
Sbjct: 305 FVALLTMSNGPEALTDVKLVHSHIVESGVSINI-ALGTALVAMYSKCESLEDTRWLFEKM 363

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +RN++SWN++++ YA+ G+ ++A+++   MQ  G+ PD+ +    L+ C     L+LG 
Sbjct: 364 PQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGR 423

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           ++HG + +  C+ D  + +SL++MY +CG    A ++F+ I Q++V+ W +M+  + +  
Sbjct: 424 KVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQN 483

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
               A+ LFH ++L+ ++   +TFL A+ AC     L KG+ VH   +  G   D+ + +
Sbjct: 484 RQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGS 543

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           AL  MY +CG ++ A+  FD    R N V+WSAMI  +  HGQ  +     + M   G+ 
Sbjct: 544 ALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLD 603

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
            +  TF + L ACS+   + EGK   + +R
Sbjct: 604 MSPATFASTLSACSNLADLREGKRIHSYVR 633



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 298/579 (51%), Gaps = 5/579 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +L+AC  L  L    ++H +I++   D    +   ++ TYG+   LDDA + F++M+
Sbjct: 3   YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMS 62

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            ++V +W++II     +   S  + +   M+ EGV+PD +T+L+   +C    +L   + 
Sbjct: 63  YKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKL 122

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IHG + +   + D  L N+ + MY  CG +  A+R F  +  R   +WTAMI  +  +  
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETS- 181

Query: 278 FQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            ++A + F +++E++  + N +T +T++ +C+   +L  G  +H + +      E   L 
Sbjct: 182 LEQAFKVF-RLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETP-LC 239

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            ALI  Y  CG++ +   +  ++ ER+I++WN LI+EY + G  +EA+ L   M   G  
Sbjct: 240 NALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCK 299

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLL 455
           PD  +  + L+      +L     +H H+++        + ++L+ MYSKC        L
Sbjct: 300 PDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWL 359

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           FE++ Q++V+ WN M+  + ++G   +A+ +   M L+ ++ D VT +  +  C+    L
Sbjct: 360 FEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADL 419

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + G+ VH  +       D+ +  +L +MY +CG+++ A+ VFD + +RNV+SW+AM+  Y
Sbjct: 420 KLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAY 479

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
               + + A  LF  +  SG+KP  +TF+  L AC  + ++ +G+   +     G + D+
Sbjct: 480 SRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDV 539

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
              + +V +  R G I  A           N   W A++
Sbjct: 540 SLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMI 578



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 245/502 (48%), Gaps = 4/502 (0%)

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           V  + L +AC +L +L  AR +H  ++R  +     LGN  I  Y KC  L  A  TF +
Sbjct: 1   VEYVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFER 60

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           +  +   +WTA+I           A+    +ML    +P+ ITL+  L SC     L  G
Sbjct: 61  MSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAG 120

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K +H  I + G   +   L  AL+  Y  CG + + ++V  A+  RN+++W  +I  +A 
Sbjct: 121 KLIHGLIAQSGHQCDL-ILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAE 179

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-V 435
             + ++A ++   M+  G   +  +  + + AC     L++G+ +H   ++     E  +
Sbjct: 180 TSL-EQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPL 238

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            ++LI MY +CG    A  +F  + ++ ++ WN++I  + Q+G+  EA+ L+  M     
Sbjct: 239 CNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGC 298

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + D+VTF+  +   +    L   K VH  ++  GV  +I + TAL  MY+KC  L+  + 
Sbjct: 299 KPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRW 358

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +F+ M +RNV+SW+ M+  Y  HG    A  + + M   G+KP+ VT + +L  C+ S  
Sbjct: 359 LFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSAD 418

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           ++ G+     +     E DL  +  ++++  R G++E A +M+       N   W A+L 
Sbjct: 419 LKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQA-EMVFDGILQRNVISWTAMLT 477

Query: 676 GCRIHKRIDVMKTIEKELSVTG 697
                 R D+   +   + ++G
Sbjct: 478 AYSRQNRQDMALLLFHAIHLSG 499


>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
 gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 197/549 (35%), Positives = 308/549 (56%), Gaps = 15/549 (2%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           +LSL + C    S    + IH  +L   I    P  N  +       DL  A   F ++ 
Sbjct: 36  LLSLIKQCK---SKNLLKQIHAQMLINSI----PKPNFLLSKIIDLKDLAYASLVFNQLT 88

Query: 259 KRCTTSWTAMISCYNRSGW--FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           K    ++  M+     + W  +   +E + K+  +  + N  T   +  +C  +  L  G
Sbjct: 89  KPNIYAFNVMLRGLATT-WKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHG 147

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K  HC + + G+  + +Y+  +LI  YA CG+M    KV   +G+R+++SWN +IS Y++
Sbjct: 148 KIGHCLVFKAGLDGD-EYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSK 206

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFV 435
            G +KEA+ L ++M+  G  PD  ++ S L ACG++G L LG  + G V++   + + ++
Sbjct: 207 MGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYM 266

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            S+LIDMY KCG    A  +F+ +  K VV WN++I G+ QNG S EAI LF+ M     
Sbjct: 267 GSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGP 326

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D VT +  + ACS IG L+ GKWV       G++ D+Y+ +AL DMYAKCG L  A R
Sbjct: 327 HPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVR 386

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LDSG-IKPNEVTFMNILWACSHS 613
           VF+SM  +N VSW+AMI     HGQ  +A SLF++M  D+G ++PN++TF+ +L AC H+
Sbjct: 387 VFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHA 446

Query: 614 GSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V+EG+  F +M + FG+ P ++HY+CMVDL +R+G +  A+ +I  MP   +  + G+
Sbjct: 447 GLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGS 506

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C+  +  DV + + +       +++G Y + S IYA    WD+  K+R +M   G+
Sbjct: 507 LLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGV 566

Query: 733 KKVPGYSTI 741
            K PG S I
Sbjct: 567 SKTPGCSWI 575



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 268/509 (52%), Gaps = 28/509 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L + C +   L ++HA +L+  +    P    L+    ++  L  + LVF+   +P+ 
Sbjct: 37  LSLIKQCKSKNLLKQIHAQMLINSI----PKPNFLLSKIIDLKDLAYASLVFNQLTKPNI 92

Query: 61  FMWAVLIK--CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + + V+++     W  + +  + LY+K+       +NF YP +  AC ++  L  G+  H
Sbjct: 93  YAFNVMLRGLATTWKKY-DFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGH 151

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             + K G D D+ +  S++  Y   G +  ARKVFD+M  RD+VSW+S+I+ Y       
Sbjct: 152 CLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTK 211

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E + +F  M  EG EPD +T++S+  ACG+L  L   R + G VL +K++++  +G++ I
Sbjct: 212 EAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALI 271

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCGDL+SA R F  +  +   +W A+I+ Y ++G   +A+  F  M E    P+ +
Sbjct: 272 DMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRV 331

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           T+I VL +C+ +G L  GK V      KG+  ++D Y+  ALI+ YA+CG + +  +V  
Sbjct: 332 TMIEVLSACSTIGALDLGKWVETHASEKGL--QHDVYVASALIDMYAKCGSLDDAVRVFE 389

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSL 415
           ++  +N +SWN +IS  A  G ++EAL L  +M      + P+  +    LSAC + G +
Sbjct: 390 SMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLV 449

Query: 416 QLGLQI-------HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMW 467
             G Q+        G V K++       S ++D+ ++ G    A+ L +++  K   ++ 
Sbjct: 450 DEGRQLFESMNLSFGLVPKVEH-----YSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVL 504

Query: 468 NSMI--CGFYQNGNSLE-AINLFHQMYLN 493
            S++  C   +N +  E  I LF +M L+
Sbjct: 505 GSLLGACQRRRNADVGERVIQLFLEMELS 533



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 227/425 (53%), Gaps = 17/425 (4%)

Query: 292 KEEPNLIT--LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
           KE    +T  L++++  C     L   K +H Q++   + P+ ++L   +I+       +
Sbjct: 26  KEHHQTLTEKLLSLIKQCKSKNLL---KQIHAQMLINSI-PKPNFLLSKIIDL----KDL 77

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKE-ALELLVQMQTWGLMPDSFSVASSLSA 408
           +    V + + + NI ++N+++   A      +  +EL  ++++ GL  ++F+      A
Sbjct: 78  AYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIA 137

Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           CGNV  L  G   H  V K     DE+V  SLI MY++CG    A  +F+ +  + +V W
Sbjct: 138 CGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSW 197

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           NSMI G+ + G + EAI LF +M     E DE+T ++ + AC ++G L  G+WV   ++ 
Sbjct: 198 NSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLE 257

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
             +  + Y+ +AL DMY KCGDL +A+RVFDSM  ++VV+W+A+I  Y  +G  N+A  L
Sbjct: 258 KKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVL 317

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
           F  M ++G  P+ VT + +L ACS  G+++ GK+        G++ D+   + ++D+ ++
Sbjct: 318 FNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAK 377

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR----IDVMKTIEKELSVTGTNDNGY 703
            G ++ A ++  SMP   N   W A+++    H +    + + + + K+      ND  +
Sbjct: 378 CGSLDDAVRVFESMPH-KNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITF 436

Query: 704 YTLLS 708
             +LS
Sbjct: 437 IGVLS 441


>gi|4544411|gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
 gi|91806147|gb|ABE65802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 582

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/589 (32%), Positives = 317/589 (53%), Gaps = 10/589 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  RD V W+++I  Y  N    +  K+F  M+++G  P   T+++L   CG+   +   
Sbjct: 1   MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           RS+HG   +  +++D  + N+ I  YSKC +L SAE  F +++ + T SW  MI  Y++S
Sbjct: 61  RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  ++A+  F  M E   E + +T+I +L +          + +HC +++ GM  +   +
Sbjct: 121 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHV------SHEPLHCLVVKCGMVNDISVV 174

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             +L+  Y+ CG +   E++  +  + +I+    ++S YA KG    A+    + +   +
Sbjct: 175 -TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCM 233

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
             D+ ++   L  C     + +G+ +HG+ IK   C    V + LI MYSK         
Sbjct: 234 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF 293

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIG 513
           LFE++Q+  ++ WNS+I G  Q+G +  A  +FHQM L   L  D +T  + +  CS + 
Sbjct: 294 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  GK +H   +      + ++ TAL DMYAKCG+   A+ VF S+      +W++MI 
Sbjct: 354 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 413

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            Y + G  + A S + +M + G+KP+E+TF+ +L AC+H G V+EGK  F AM + FG+ 
Sbjct: 414 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 473

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P LQHYA MV LL R+     A  +I  M    + ++WGALL+ C IH+ ++V + + ++
Sbjct: 474 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARK 533

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +    + G Y L+SN+YA E  WD+  +VR++M+  G     G S I
Sbjct: 534 MFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 217/480 (45%), Gaps = 21/480 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P    C  + +   +H     +GL  D      LI  Y++   L S+ ++F   K+  +
Sbjct: 48  LPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKST 107

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  +   EE+I ++  M  +   IS     ++L A  S       E +H  
Sbjct: 108 VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCL 161

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++KCG   D  + TS++C Y   GCL  A +++       +V  +SI++ Y +  D+   
Sbjct: 162 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 221

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +  F    +  ++ D V ++ +   C +   +    S+HG+ ++  +     + N  I M
Sbjct: 222 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITM 281

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK-MLEVKEEPNLIT 299
           YSK  D+ +    F ++++    SW ++IS   +SG    A E F + ML     P+ IT
Sbjct: 282 YSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAIT 341

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++L  C+ L  L  GK +H   +R     E +++  ALI+ YA+CG   + E V  +I
Sbjct: 342 IASLLAGCSQLCCLNLGKELHGYTLRNNFENE-NFVCTALIDMYAKCGNEVQAESVFKSI 400

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                 +WN +IS Y+  G+   AL   ++M+  GL PD  +    LSAC + G +  G 
Sbjct: 401 KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 460

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYS--------KCGFKNLAYLLFERIQQKSVVMWNSMI 471
                +IK     EF  S  +  Y+         C F    YL+++   +    +W +++
Sbjct: 461 ICFRAMIK-----EFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 515


>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
          Length = 671

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/634 (31%), Positives = 327/634 (51%), Gaps = 13/634 (2%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VHG  +K G      +  ++L +Y   G L DAR VFD+M  R+VVSWS +I +      
Sbjct: 24  VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGV 83

Query: 177 VSEGLKMFHSMVREGVE--PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           + + L +F  M+R G    P+  T+ +L   C           +H   ++  +  D  + 
Sbjct: 84  LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC---YNRSGWFQKALESFVKMLEV 291
            + + MY+KCG + S+ R FV   +R   SWT+MI+C   +  SG+   A+  F KML +
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMS 350
           K  P   T   +L        L  GK VH  +++  MG E D  LG AL+  Y  CG M 
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVK--MGTEVDPALGTALLAMYGRCGGMD 261

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP-DSFSVASSLSAC 409
           E  ++   I   +  S   L++ YAR G + EA+ +   M   G MP D  ++ S L  C
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDM-LMGHMPIDQSAITSLLQVC 319

Query: 410 GNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            ++G L++  +IH + +K   + D  + ++++ +Y KCG    + ++F  ++ K  + W 
Sbjct: 320 SSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWT 379

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           +++  + QN  S EA+  F +M    LE       + ++ACS    L  G  +H +++  
Sbjct: 380 ALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKL 439

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
           GV  D  ++ AL  MYAKCG +Q A ++F+S   R ++SW+A+I  +  HG    A  LF
Sbjct: 440 GVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLF 499

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSR 647
             M +  + P++ TF+ +L +CS  G V EG  YF  M+  + +EP ++HY CMVDL +R
Sbjct: 500 DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFAR 559

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
           +G    A K I +MP   +  +W ALL  CR+H  +D+ +   K++      D   Y +L
Sbjct: 560 AGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIIL 619

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           S+I+A    WDE  + R++++   L+K  G S +
Sbjct: 620 SSIHASIDMWDEKARNRTLLDFQQLRKDVGSSQL 653



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 284/574 (49%), Gaps = 12/574 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR--EQAT 92
           L+ SY   G L  +R VFD     +   W+VLI          +++ L+  M+R  E+  
Sbjct: 43  LLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGVLGDALSLFAGMLRGGERDR 102

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
            ++F   +++  C+   D  +GE+VH   +K G D+D+ +  +++  Y + G +  + + 
Sbjct: 103 PNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRA 162

Query: 153 FDKMTSRDVVSWSSIIASYFDNADV---SEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           F     R V+SW+S+IA   ++ D       + +F  M+   V P   T   + +     
Sbjct: 163 FVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVP 222

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
             L   + +HG +++   ++D  LG + + MY +CG +    R   +I +    S T+++
Sbjct: 223 ELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLL 281

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + Y R+G   +A+  F  ML      +   + ++L  C+ LG LR  K +HC  ++    
Sbjct: 282 TAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFR 341

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +   L  A++  Y +CG ++  E V + +  ++ +SW  L++ Y +  +S+EAL    +
Sbjct: 342 LDTLLLN-AIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFRE 400

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGF 448
           M   GL    F + S L AC    SL  G QIH  V+K+   D+  V+++L+ MY+KCG 
Sbjct: 401 MVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGV 460

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
             +A  +F   + + ++ WN++I  F Q+GN + AI LF  M    +  D+ TF+  + +
Sbjct: 461 VQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSS 520

Query: 509 CSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           CS +G + +G ++       Y +   +   T + D++A+ G    A +  D+M  + + +
Sbjct: 521 CSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQL 580

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            W A++    +HG L+      K++L+  IKP +
Sbjct: 581 VWEALLASCRVHGNLDLGRMAAKKILE--IKPED 612



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 241/471 (51%), Gaps = 8/471 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN- 73
           ++HA  +  G+  D   +  L++ YA+ G + SS   F    +     W  +I C + + 
Sbjct: 126 QVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHG 185

Query: 74  --NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
              + + +I+L+ KM+  +   +N  +  +L+       L SG++VHG ++K G + D  
Sbjct: 186 DSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPA 245

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + T++L  YG  G +D+  ++  ++   D  S +S++ +Y  N    E +++F  M+   
Sbjct: 246 LGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGH 304

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +  D   + SL + C  L  LR  + IH + L+   ++D  L N+ + +Y KCGD+ S+E
Sbjct: 305 MPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSE 364

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  +E + T SWTA+++CY ++   Q+AL  F +M+    E ++  + +VL +C+   
Sbjct: 365 IVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATS 424

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  G  +H ++++ G+  +   +  AL+  YA+CG +    K+ ++   R I+SWN LI
Sbjct: 425 SLSCGWQIHSRVVKLGVDDDTS-VENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALI 483

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDC 430
           + +++ G    A++L   MQ   + PD ++    LS+C  +G +  G +    +  K + 
Sbjct: 484 TSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNL 543

Query: 431 KDEFVQ-SSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           + +    + ++D++++ G F +    +     Q   ++W +++     +GN
Sbjct: 544 EPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGN 594



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 108/204 (52%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S   LR +  +H + L      D      ++  Y + G + SS +VF+T +  D+  W  
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTA 380

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           L+ CY+ N+  +E++  + +M+R+    S F   SVLRACS+   L  G ++H R++K G
Sbjct: 381 LLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLG 440

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D D  ++ +++  Y + G +  A K+F+   +R ++SW+++I S+  + +    +++F 
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFD 500

Query: 186 SMVREGVEPDFVTMLSLAEACGEL 209
            M  E V PD  T + L  +C  +
Sbjct: 501 MMQEEMVCPDDYTFVGLLSSCSRM 524


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 198/579 (34%), Positives = 313/579 (54%), Gaps = 8/579 (1%)

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTML---SLAEACGELCSLRPARSIHGHVLRRK 226
           S+F   DV++ ++   SM    ++   +T L   +L ++     S +  + +H H++   
Sbjct: 30  SHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFS 89

Query: 227 I-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
           I + +  L       Y+ CG +  AE  F  I  + +  W  MI  Y  +G   K+L  +
Sbjct: 90  ILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLY 149

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            +ML   +  +  T   VL +C  L  +  G+ VH +++  G+  +  Y+G +L+  YA+
Sbjct: 150 REMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI-YVGNSLLAMYAK 208

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
            G M     V   + ER++ SWN +IS YA+   S  A  +   M   GL  D  ++   
Sbjct: 209 FGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGL 268

Query: 406 LSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
           LSAC ++ +++ G  IHG+ ++  I   ++F  +SLI+MY  C     A  LFER++ K 
Sbjct: 269 LSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKD 328

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
            V WNSMI G+ +NG++ E++ LF +M L+    D+VTF+  + AC  I  L  G  +H 
Sbjct: 329 TVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHS 388

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
            L+  G   +  + TAL DMY+KCG L  ++RVFD M ++++VSWSAM+  YG+HG+  +
Sbjct: 389 YLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGRE 448

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMV 642
           A S+   M  + + P+   F +IL ACSH+G V EGK  F  M + + V+P L HY+CMV
Sbjct: 449 AISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMV 508

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           DLL R+G ++ A+ +I +M       IW ALL   R+HK I + +   +++         
Sbjct: 509 DLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVS 568

Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            Y  LSNIYA E  WD+  +VR+++   GLKK PG S I
Sbjct: 569 SYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFI 607



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 254/473 (53%), Gaps = 6/473 (1%)

Query: 4   FRSCTNLRKLTRLHAHLL-VTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           F +  + ++  +LHAH++  + L  +   +T+L   YA  G +  + ++FD     +SF+
Sbjct: 69  FTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFL 128

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+ Y  N    +S++LY +M+       NF YP VL+AC  L  +  G +VH  ++
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVV 188

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
            CG + D  +  S+L  Y +FG +  AR VFD+M  RD+ SW+++I+ Y  NAD      
Sbjct: 189 VCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFL 248

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLGNSFIVMY 241
           +F  M + G+  D  T+L L  AC +L +++  + IHG+ +R  I   +    NS I MY
Sbjct: 249 VFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMY 308

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
             C  ++ A R F ++  + T SW +MI  Y R+G   ++L  F +M      P+ +T I
Sbjct: 309 CNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFI 368

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            VLG+C  +  LR G S+H  +++KG       +G AL++ Y++CG ++   +V   + +
Sbjct: 369 AVLGACDQIAALRYGMSIHSYLVKKGFDAN-TIVGTALVDMYSKCGSLACSRRVFDEMPD 427

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++++SW+ +++ Y   G  +EA+ +L  M+   ++PD+    S LSAC + G +  G +I
Sbjct: 428 KSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487

Query: 422 HGHVIK-IDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVV-MWNSMI 471
              + K  + K      S ++D+  + G  + AY++   ++ K    +W +++
Sbjct: 488 FYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALL 540


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 217/713 (30%), Positives = 350/713 (49%), Gaps = 77/713 (10%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK-MTSR 159
            LR+C S G L     +HGR++  G      +Q ++L  Y   G L DAR++    +   
Sbjct: 26  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 85

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE-------ACGELCSL 212
           +V++ + ++  Y     +S+  ++F  M R  V   + T++S          +CG L   
Sbjct: 86  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV-ASWNTLMSDTSRPAGSWMSCGALGCR 144

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK------------- 259
             A  + G   +     D  +  + + M+ +CG +  A R F +IE+             
Sbjct: 145 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 204

Query: 260 ------------------RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
                             R   SW  MI+  ++SG  ++AL   V+M       +  T  
Sbjct: 205 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 264

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIG 360
           + L +CA L  L  GK +H ++IR    P+ D Y+  ALIE YA+CG   E ++V +++ 
Sbjct: 265 SSLTACARLFSLGWGKQLHAKVIRSL--PQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 322

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           +RN +SW +LI    +     +++EL  QM+   +  D F++A+ +S C N   L LG Q
Sbjct: 323 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 382

Query: 421 IHGHVIKIDCKDEFVQS-SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H   +K       V S SLI +Y+KCG    A  +F  + ++ +V W SMI  + Q GN
Sbjct: 383 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 442

Query: 480 SLEAINLFH---------------------------QMYLNCLEM-----DEVTFLTAIQ 507
            ++A   F                            +MY   L       D VT++T  +
Sbjct: 443 IIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 502

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            C++IG  + G  +    +  G+  ++ +  A   MY+KCG +  AQ++FD ++ ++VVS
Sbjct: 503 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVS 562

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+AMI  Y  HG    AA  F  ML  G KP+ ++++ +L  CSHSG V+EGK YF+ M 
Sbjct: 563 WNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 622

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           R+ G+ P L+H++CMVDLL R+G +  A  +I  MP      +WGALL+ C+IH   ++ 
Sbjct: 623 RVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 682

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +   K +    + D+G Y LL+ IY++ G  D+  +VR +M   G+KK PGYS
Sbjct: 683 ELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 735



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 178/709 (25%), Positives = 305/709 (43%), Gaps = 82/709 (11%)

Query: 4   FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSS-RLVFDTFKEPD 59
            RSC +   L     LH  L+  GL         L+ +Y   G+L  + RL+    KEP+
Sbjct: 27  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLR------ACSSLGDLGS 113
                +++  Y       ++  L+ +M R      N +     R      +C +LG    
Sbjct: 87  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146

Query: 114 GEKVHGRIIKCGFDKDDVIQTSIL-----CTYGEFGC----------------------- 145
             ++ G   K  F  D  ++T+++     C Y +F                         
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206

Query: 146 ---LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
              +D A + F+ M  RDVVSW+ +IA+   +  V E L +   M R+GV  D  T  S 
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 266

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
             AC  L SL   + +H  V+R   +ID  + ++ I +Y+KCG    A+R F  ++ R +
Sbjct: 267 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 326

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SWT +I    +   F K++E F +M       +   L T++  C     L  G+ +H  
Sbjct: 327 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 386

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            ++ G       +  +LI  YA+CG +   E V  ++ ER+I+SW  +I+ Y++ G   +
Sbjct: 387 CLKSGHNRAI-VVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIK 445

Query: 383 ALELLVQMQ-----TWGLM---------------------------PDSFSVASSLSACG 410
           A E    M      TW  M                           PD  +  +    C 
Sbjct: 446 AREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCA 505

Query: 411 NVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           ++G+ +LG QI GH +K     +  V ++ I MYSKCG  + A  LF+ +  K VV WN+
Sbjct: 506 DIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNA 565

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-Y 528
           MI G+ Q+G   +A   F  M     + D ++++  +  CS+ G +++GK     +   +
Sbjct: 566 MITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVH 625

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHG--QLNDAA 585
           G+   +   + + D+  + G L  A+ + D M  +     W A++    +HG  +L + A
Sbjct: 626 GISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELA 685

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +     LDS   P+  ++M +    S +G  ++       MR  G++ +
Sbjct: 686 AKHVFELDS---PDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN 731



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 247/509 (48%), Gaps = 57/509 (11%)

Query: 194 PDFVTMLSLAEA---CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           P  VT  +LA+A   CG   +L  AR++HG ++   +     L N+ +  Y  CG L  A
Sbjct: 16  PHAVTQ-ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDA 74

Query: 251 ERTF-VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
            R     I++    +   M++ Y + G    A E F +M   ++  +  TL++     AG
Sbjct: 75  RRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPR-RDVASWNTLMSDTSRPAG 133

Query: 310 LGWLREGKSVHCQIIRK---GMGPEYDYLG-----PALIEFYAECGKM-------SECEK 354
             W+  G ++ C+ +     G+  ++D+ G      AL++ +  CG +       S+ E+
Sbjct: 134 -SWMSCG-ALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 191

Query: 355 ------------------VIHAI------GERNILSWNMLISEYARKGMSKEALELLVQM 390
                             + HAI       ER+++SWNM+I+  ++ G  +EAL L+V+M
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFK 449
              G+  DS +  SSL+AC  + SL  G Q+H  VI+ +   D +V S+LI++Y+KCG  
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A  +F  +Q ++ V W  +I G  Q     +++ LF+QM    + +D+    T I  C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            N   L  G+ +H   +  G  + I +  +L  +YAKCGDLQ A+ VF SMSER++VSW+
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRI 628
           +MI  Y   G +  A   F  M       N +T+  +L A    G+ E+G K Y   +  
Sbjct: 432 SMITAYSQIGNIIKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
             V PD   Y   V L     DI GA K+
Sbjct: 488 KDVTPDWVTY---VTLFRGCADI-GANKL 512


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/603 (31%), Positives = 329/603 (54%), Gaps = 7/603 (1%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLS 201
           G L  AR+VFDKM  RD+VSW++II  Y    +  E + +F +M  V   V PD   +  
Sbjct: 48  GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           + +ACG+  ++    S+H + ++  +     +G+S + MY + G +  + R F ++  R 
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRN 167

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             +WTA+I+    +G +++ L  F +M   +E  +  T    L +CAGL  ++ GK +H 
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHT 227

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            +I +G      ++  +L   Y ECG+M +   +   + ER+++SW  LI  Y R G  +
Sbjct: 228 HVIVRGFDATV-WVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEE 286

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
           +A+E  ++M+   + P+  + A+  SAC ++  L  G Q+H +V  +   D   V +S++
Sbjct: 287 KAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMM 346

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MYS CG  + A +LF+ ++ + ++ W+++I G+ Q G   EA   F  M  +  +  + 
Sbjct: 347 KMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDF 406

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              + +    N+  LE G+ VH     +G+ ++  + + L +MY+KCG+++ A ++F+  
Sbjct: 407 ALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEET 466

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              ++VS +AMI+ Y  HG+  +A  LF++ L  G  P+ VTF+++L AC+HSG ++ G 
Sbjct: 467 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGF 526

Query: 621 FYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            YFN M+  + + P  +HY CMVDLL R+G +  A KMI  M +  +  +W  LL  C+ 
Sbjct: 527 HYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKA 586

Query: 680 HKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
              I+   +  E+ L +  T      T L+NIY+  GN +E   VR  M+  G+ K PG+
Sbjct: 587 KGDIERGRRAAERILELDPTCATALVT-LANIYSSTGNLEEAANVRKNMKAKGVIKEPGW 645

Query: 739 STI 741
           S+I
Sbjct: 646 SSI 648



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 174/607 (28%), Positives = 295/607 (48%), Gaps = 13/607 (2%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM--IREQATI 93
           + S    G+LR +R VFD     D   W  +IK Y+  N  +E+++L+  M  +    + 
Sbjct: 41  LRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSP 100

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
              +   VL+AC    ++  GE +H   +K        + +S+L  Y   G ++ + +VF
Sbjct: 101 DTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVF 160

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
            +M  R+ V+W++II          EGL  F  M       D  T     +AC  L  ++
Sbjct: 161 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVK 220

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + IH HV+ R       + NS   MY++CG++      F  + +R   SWT++I  YN
Sbjct: 221 YGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYN 280

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           R G  +KA+E+F+KM   +  PN  T  T+  +CA L  L  G+ +HC +   G+     
Sbjct: 281 RIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLS 340

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  ++++ Y+ CGK+     +   +  R+I+SW+ +I  Y++ G  +EA +    M+  
Sbjct: 341 -VSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQS 399

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLA 452
           G  P  F++AS LS  GN+  L+ G Q+H         ++  V+S+LI+MYSKCG    A
Sbjct: 400 GPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEA 459

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +FE   +  +V   +MI G+ ++G S EAI+LF +        D VTF++ + AC++ 
Sbjct: 460 SKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHS 519

Query: 513 GQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSA 570
           GQL+ G  + +     Y +R        + D+  + G L  A+++ D MS +++ V W+ 
Sbjct: 520 GQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTT 579

Query: 571 MIDCYGMHGQLNDAASLFKQM--LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           ++      G +       +++  LD       VT  NI    S +G++EE       M+ 
Sbjct: 580 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIY---SSTGNLEEAANVRKNMKA 636

Query: 629 FGV--EP 633
            GV  EP
Sbjct: 637 KGVIKEP 643



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 231/472 (48%), Gaps = 8/472 (1%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA--LESFVKMLEVK 292
           NS +      G+L  A + F K+  R   SWTA+I  Y  +    +A  L S +++++  
Sbjct: 38  NSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPA 97

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             P+   +  VL +C     +  G+S+H   ++  +     ++G +L++ Y   GK+ + 
Sbjct: 98  VSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSV-FVGSSLLDMYKRVGKIEKS 156

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            +V   +  RN ++W  +I+     G  KE L    +M +   + D+F+ A +L AC  +
Sbjct: 157 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGL 216

Query: 413 GSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
             ++ G QIH HVI    D    +V +SL  MY++CG       LFE + ++ VV W S+
Sbjct: 217 RQVKYGKQIHTHVIVRGFDAT-VWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSL 275

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I  + + G+  +A+  F +M  + +  +E TF T   AC+++ +L  G+ +H  + S G+
Sbjct: 276 IVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGL 335

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
              + +  ++  MY+ CG L +A  +F  M  R+++SWS +I  Y   G   +A   F  
Sbjct: 336 NDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSW 395

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M  SG KP +    ++L    +   +E G+        FG+E +    + ++++ S+ G+
Sbjct: 396 MRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGN 455

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIH-KRIDVMKTIEKELSVTGTNDN 701
           I+ A K+          S+  A++NG   H K  + +   EK L V  + D+
Sbjct: 456 IKEASKIFEETDRDDIVSL-TAMINGYAEHGKSKEAIDLFEKSLKVGFSPDS 506



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/559 (24%), Positives = 244/559 (43%), Gaps = 37/559 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA+ + T L       + L++ Y  +G +  S  VF      ++  W  +I   +    
Sbjct: 124 LHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGR 183

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           ++E +  + +M   +     F +   L+AC+ L  +  G+++H  +I  GFD    +  S
Sbjct: 184 YKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANS 243

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y E G + D   +F+ M+ RDVVSW+S+I +Y       + ++ F  M    V P+
Sbjct: 244 LATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPN 303

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  ++  AC  L  L     +H +V    +     + NS + MYS CG L SA   F 
Sbjct: 304 EQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQ 363

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   SW+ +I  Y+++G+ ++A + F  M +   +P    L ++L     +  L  
Sbjct: 364 GMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEG 423

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ VH      G+  +   +   LI  Y++CG + E  K+       +I+S   +I+ YA
Sbjct: 424 GRQVHALAFCFGL-EQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYA 482

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
             G SKEA++L  +    G  PDS +  S L+AC + G L LG                 
Sbjct: 483 EHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFH--------------- 527

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
                       + NL    +     K    +  M+    + G   EA  +  +M     
Sbjct: 528 ------------YFNLMQEKYNMRPAKE--HYGCMVDLLCRAGRLSEAEKMIDEM---SW 570

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + D+V + T + AC   G +E+G+    +++         + T L ++Y+  G+L+ A  
Sbjct: 571 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVT-LANIYSSTGNLEEAAN 629

Query: 556 VFDSMSERNVVS---WSAM 571
           V  +M  + V+    WS++
Sbjct: 630 VRKNMKAKGVIKEPGWSSI 648



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 178/380 (46%), Gaps = 6/380 (1%)

Query: 4   FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            ++C  LR++    ++H H++V G       +  L   Y E G +R    +F+   E D 
Sbjct: 210 LKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDV 269

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  LI  Y      E+++  + KM   Q   +   + ++  AC+SL  L  GE++H  
Sbjct: 270 VSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCN 329

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +   G +    +  S++  Y   G LD A  +F  M  RD++SWS+II  Y       E 
Sbjct: 330 VFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEA 389

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            K F  M + G +P    + SL    G +  L   R +H       ++ +  + ++ I M
Sbjct: 390 FKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINM 449

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG++  A + F + ++    S TAMI+ Y   G  ++A++ F K L+V   P+ +T 
Sbjct: 450 YSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTF 509

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           I+VL +C   G L  G      +  K  M P  ++ G  +++     G++SE EK+I  +
Sbjct: 510 ISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYG-CMVDLLCRAGRLSEAEKMIDEM 568

Query: 360 G-ERNILSWNMLISEYARKG 378
             +++ + W  L+     KG
Sbjct: 569 SWKKDDVVWTTLLIACKAKG 588


>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 579

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 176/511 (34%), Positives = 302/511 (59%), Gaps = 12/511 (2%)

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I  Y +  +++ A   F K+ +R   +W +MI  Y+R+ +  + L  + +M+    +P+
Sbjct: 24  LIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMISEGIKPD 83

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T    L +C+ L  L  G+ +  Q +  G G +  ++  +++  YA+ GKM + + V 
Sbjct: 84  SSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDV-FVVSSVLNLYAKSGKMDKAKIVF 142

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             + +R+++SW  +I+ +A+ G   +A+++   MQ      D   +   + AC ++G  +
Sbjct: 143 DKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSK 202

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            GL +HGH+++ +   D  +Q+SLIDMY+K G   LA  +FE I  KSV+ W ++I GF 
Sbjct: 203 FGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFA 262

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           QNG + + +    +M  +  + D V+ ++++ AC+ +G L+ GK +H  ++     K +Y
Sbjct: 263 QNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIV-----KRLY 317

Query: 536 ID----TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           +D    TAL DMYAKCG L  A+ +FD +  R+++ W+AMI  YG+HG   +A SLF +M
Sbjct: 318 LDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKM 377

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGD 650
            ++ I P+  TF ++L ACSHSG VEEG+++F+ +     ++P  +HYACMVDLLSR+G 
Sbjct: 378 KETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQ 437

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
           +E A+++I SM      +IW ALL+GC  HK + + + + K++  +  +D G Y L+SN 
Sbjct: 438 VEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILESNPDDLGIYVLVSNF 497

Query: 711 YAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++    WD+    R IM+ TG++KVPGYS +
Sbjct: 498 FSMAKKWDDAAVFRKIMKNTGMRKVPGYSAV 528



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 260/474 (54%), Gaps = 8/474 (1%)

Query: 13  LTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +T++HA +L TGL + D  +  +LI SY  + ++  +R VF+   +     W  +I  Y 
Sbjct: 1   MTQIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYS 60

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
             N+ +E + LY++MI E     +  +   L+ACSSL DL  GE +  + +  G+  D  
Sbjct: 61  RTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVF 120

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + +S+L  Y + G +D A+ VFDKM  RDVVSW+++I  +  +    + + ++ +M +E 
Sbjct: 121 VVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKER 180

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            E D V M+ L +AC  L   +   S+HGH++RR++ +D  L  S I MY+K G L  A 
Sbjct: 181 TEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELAS 240

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R F  I  +   SW A+IS + ++G+  K L S V+M     +P+L++LI+ L +CA +G
Sbjct: 241 RVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVG 300

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L+ GKS+H  I+++    +    G ALI+ YA+CG ++    +   I  R+++ WN +I
Sbjct: 301 NLKVGKSLHGHIVKRLYLDKVS--GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMI 358

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S Y   G   EAL L ++M+   + PD  + AS LSAC + G ++ G Q   HV+    K
Sbjct: 359 SSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEG-QYWFHVLIDKSK 417

Query: 432 ---DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGNSL 481
               E   + ++D+ S+ G    AY L E +  K  + +W +++ G   + N L
Sbjct: 418 IQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLL 471



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 265/484 (54%), Gaps = 8/484 (1%)

Query: 116 KVHGRIIKCGF---DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           ++H  I+  G    D + + Q  ++ +YG    +  AR VF+KM  R + +W+S+I +Y 
Sbjct: 3   QIHALILTTGLFFNDANSIAQ--LIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYS 60

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
                 E L +++ M+ EG++PD  T     +AC  L  L     I    +      D  
Sbjct: 61  RTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVF 120

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + +S + +Y+K G +  A+  F K+ KR   SWT MI+ + +SG    A++ +  M + +
Sbjct: 121 VVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKER 180

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            E + + ++ ++ +C  LG  + G SVH  ++R+ M  + + L  +LI+ YA+ GK+   
Sbjct: 181 TEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMD-NVLQTSLIDMYAKNGKLELA 239

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            +V   I  ++++SW  LIS +A+ G + + L  LV+MQ  G  PD  S+ SSLSAC  V
Sbjct: 240 SRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQV 299

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           G+L++G  +HGH++K    D+   ++LIDMY+KCG    A  LF++I+ + +++WN+MI 
Sbjct: 300 GNLKVGKSLHGHIVKRLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMIS 359

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VR 531
            +  +G+ +EA++LF +M    +  D  TF + + ACS+ G +E+G++  H LI    ++
Sbjct: 360 SYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQ 419

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
                   + D+ ++ G ++ A ++ +SM  +  +  W A++     H  L     + K+
Sbjct: 420 PSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKK 479

Query: 591 MLDS 594
           +L+S
Sbjct: 480 ILES 483



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 420 QIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           QIH  ++       D    + LI  Y +      A  +FE++ Q+S+  WNSMI  + + 
Sbjct: 3   QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
               E +NL+++M    ++ D  TF   ++ACS++  L+ G+ + ++ + +G   D+++ 
Sbjct: 63  NYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVV 122

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           +++ ++YAK G +  A+ VFD M +R+VVSW+ MI  +   G+  DA  +++ M     +
Sbjct: 123 SSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTE 182

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            + V  + ++ AC+  G  + G      M    +  D      ++D+ +++G +E A ++
Sbjct: 183 GDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRV 242

Query: 658 IHSMPFPANGSIWGALLNG 676
              +P+ +  S WGAL++G
Sbjct: 243 FEGIPYKSVIS-WGALISG 260


>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
          Length = 583

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/589 (32%), Positives = 317/589 (53%), Gaps = 10/589 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  RD V W+++I  Y  N    +  K+F  M+++G  P   T+++L   CG+   +   
Sbjct: 1   MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           RS+HG   +  +++D  + N+ I  YSKC +L SAE  F +++ + T SW  MI  Y++S
Sbjct: 61  RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  ++A+  F  M E   E + +T+I +L +          + +HC +++ GM  +   +
Sbjct: 121 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHV------SHEPLHCLVVKCGMVNDISVV 174

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             +L+  Y+ CG +   E++  +  + +I+    ++S YA KG    A+    + +   +
Sbjct: 175 -TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCM 233

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
             D+ ++   L  C     + +G+ +HG+ IK   C    V + LI MYSK         
Sbjct: 234 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF 293

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIG 513
           LFE++Q+  ++ WNS+I G  Q+G +  A  +FHQM L   L  D +T  + +  CS + 
Sbjct: 294 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  GK +H   +      + ++ TAL DMYAKCG+   A+ VF S+      +W++MI 
Sbjct: 354 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 413

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            Y + G  + A S + +M + G+KP+E+TF+ +L AC+H G V+EGK  F AM + FG+ 
Sbjct: 414 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 473

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P LQHYA MV LL R+     A  +I  M    + ++WGALL+ C IH+ ++V + + ++
Sbjct: 474 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARK 533

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +    + G Y L+SN+YA E  WD+  +VR++M+  G     G S I
Sbjct: 534 MFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 217/480 (45%), Gaps = 21/480 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P    C  + +   +H     +GL  D      LI  Y++   L S+ ++F   K+  +
Sbjct: 48  LPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKST 107

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I  Y  +   EE+I ++  M  +   IS     ++L A  S       E +H  
Sbjct: 108 VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCL 161

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++KCG   D  + TS++C Y   GCL  A +++       +V  +SI++ Y +  D+   
Sbjct: 162 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 221

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +  F    +  ++ D V ++ +   C +   +    S+HG+ ++  +     + N  I M
Sbjct: 222 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITM 281

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK-MLEVKEEPNLIT 299
           YSK  D+ +    F ++++    SW ++IS   +SG    A E F + ML     P+ IT
Sbjct: 282 YSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAIT 341

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + ++L  C+ L  L  GK +H   +R     E +++  ALI+ YA+CG   + E V  +I
Sbjct: 342 IASLLAGCSQLCCLNLGKELHGYTLRNNFENE-NFVCTALIDMYAKCGNEVQAESVFKSI 400

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                 +WN +IS Y+  G+   AL   ++M+  GL PD  +    LSAC + G +  G 
Sbjct: 401 KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 460

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYS--------KCGFKNLAYLLFERIQQKSVVMWNSMI 471
                +IK     EF  S  +  Y+         C F    YL+++   +    +W +++
Sbjct: 461 ICFRAMIK-----EFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 515


>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Vitis vinifera]
          Length = 690

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 209/678 (30%), Positives = 347/678 (51%), Gaps = 48/678 (7%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           SV+R C        G  +H  IIK G   D     ++L  Y +   L DAR++FD+   R
Sbjct: 8   SVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLER 67

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPARSI 218
           +V +W+++I++Y  +      LK +  M+    E P+     ++ +ACG +  L   + I
Sbjct: 68  NVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLI 127

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG V R  +  D  L N+ + MY KCG L SA + F  I    +TSW  MIS Y + G  
Sbjct: 128 HGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLM 187

Query: 279 QKALESFVKMLEVKEEPNLIT---LITVLGSCAGLGWLR------------EG------- 316
           ++A+  F +M     EP+ ++   +I   G    LG LR            +G       
Sbjct: 188 EEAVNLFYQM----PEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCAL 243

Query: 317 ------------KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI--HAIGER 362
                       K +HC + + G G    +   AL++ Y+ C ++ E  K+   ++    
Sbjct: 244 KTCGCFQLLVMVKQIHCYVNKSGFGS-CCFTASALVDSYSNCNELDEAIKMFDEYSCCSA 302

Query: 363 NILS----WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +IL     WN ++S Y     +  A+ L+ Q+ + G   DSF+  S+L  C N+ + +LG
Sbjct: 303 SILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLG 362

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           LQ+ G  +    + D  V S LID+Y+  G    A  LF R+ +K +V+W+S+I    + 
Sbjct: 363 LQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKM 422

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G +    +LF  M    +E+D+    + ++ACS++  L  GK VH   +  G   +    
Sbjct: 423 GLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITV 482

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           T+L D+YAKCG+++    +F   SER+ V ++ +I   G +G+  +A   F++M++ G+K
Sbjct: 483 TSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLK 542

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PNE+TF+ +L AC H+G VEE    F  M+  + +EP ++HY C+V+LLS++G  + A +
Sbjct: 543 PNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEE 602

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           +I  MPF  + +IW +LL  C  HK+ +++  I + L  T   D      LSN+YA    
Sbjct: 603 LIAEMPFEPDQTIWNSLLGACGTHKKTELVNFIAERLLTTLPEDPSILVTLSNVYATLEM 662

Query: 717 WDEFGKVRSIMEVTGLKK 734
           WD+  K+R +++  G+K+
Sbjct: 663 WDDSRKMREVIKKVGMKE 680



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/623 (24%), Positives = 281/623 (45%), Gaps = 48/623 (7%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + R C   R       LHAH++  G+  D   +  L+  Y ++  L+ +R +FD   E
Sbjct: 7   VSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLE 66

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEK 116
            +   W  +I  Y  +   + ++  Y +M+  ++   N F+Y +VL+AC  +GDL SG+ 
Sbjct: 67  RNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKL 126

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +HGR+ +     D V+  ++L  Y + G L  ARKVFD +      SW+++I+ Y     
Sbjct: 127 IHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGL 186

Query: 177 VSEGLKMFHSMV------------------------------REGVEPDFVTMLSLAEAC 206
           + E + +F+ M                               R+G++ D  T     + C
Sbjct: 187 MEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTC 246

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE------KR 260
           G    L   + IH +V +          ++ +  YS C +L  A + F +          
Sbjct: 247 GCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILD 306

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
           C   W +M+S Y  +     A+    ++  +    +  T  + L  C  L   R G  V 
Sbjct: 307 CLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQ 366

Query: 321 CQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
              +  G   E DY +G  LI+ YA  GK+ +  ++ + + E++I+ W+ LIS   + G+
Sbjct: 367 GLAVTSGY--ELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGL 424

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SS 438
           +     L   M    +  D F ++S L AC ++  L  G Q+H   +K   + E +  +S
Sbjct: 425 NSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTS 484

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           LID+Y+KCG       LF    ++  V +  +I G  QNG ++EA+  F +M    L+ +
Sbjct: 485 LIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPN 544

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID--TALTDMYAKCGDLQTAQRV 556
           E+TFL  + AC + G +E+  W   K +    + + +I+    + ++ ++ G  + A+ +
Sbjct: 545 EITFLGVLSACRHAGLVEEA-WTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEEL 603

Query: 557 FDSMS-ERNVVSWSAMIDCYGMH 578
              M  E +   W++++   G H
Sbjct: 604 IAEMPFEPDQTIWNSLLGACGTH 626



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 236/503 (46%), Gaps = 39/503 (7%)

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D   ++S+   CG   + R  RS+H H+++  +  D    N+ + MY     L  A R F
Sbjct: 2   DLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLF 61

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWL 313
            +  +R   +WT MIS Y+ SG    AL+ +V+MLE K E PN      VL +C  +G L
Sbjct: 62  DETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDL 121

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             GK +H ++ R  +G +   L   L++ Y +CG +S   KV   I   +  SWN +IS 
Sbjct: 122 ESGKLIHGRVFRANLGFD-TVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISG 180

Query: 374 YARKGMSKEALELLVQMQ-----TW-------------------------GLMPDSFSVA 403
           Y ++G+ +EA+ L  QM      +W                         GL  D F+ +
Sbjct: 181 YGKEGLMEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFS 240

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
            +L  CG    L +  QIH +V K       F  S+L+D YS C   + A  +F+     
Sbjct: 241 CALKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCC 300

Query: 463 S------VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           S      + +WNSM+ G+  N  +  AINL  Q++     +D  TF +A++ C N+    
Sbjct: 301 SASILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFR 360

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            G  V    ++ G   D  + + L D+YA  G ++ A R+F  + E+++V WS++I    
Sbjct: 361 LGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCT 420

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
             G  +   SLF+ M++  I+ ++    ++L ACS    +  GK   +     G E +  
Sbjct: 421 KMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERI 480

Query: 637 HYACMVDLLSRSGDIEGAFKMIH 659
               ++DL ++ G+IE    + +
Sbjct: 481 TVTSLIDLYAKCGEIEDGLALFY 503



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 225/535 (42%), Gaps = 55/535 (10%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +    L +D      L++ Y + GSL S+R VFD    P S  W  +I  Y     
Sbjct: 127 IHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGL 186

Query: 76  FEESILLYHKMI------------------------------REQATISNFIYPSVLRAC 105
            EE++ L+++M                               R+   +  F +   L+ C
Sbjct: 187 MEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTC 246

Query: 106 SSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT--SRDVVS 163
                L   +++H  + K GF       ++++ +Y     LD+A K+FD+ +  S  ++ 
Sbjct: 247 GCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILD 306

Query: 164 ----WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
               W+S+++ Y  N   S  + +   +   G   D  T  S  + C  L + R    + 
Sbjct: 307 CLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQ 366

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
           G  +    ++D  +G+  I +Y+  G +  A R F ++ ++    W+++IS   + G   
Sbjct: 367 GLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNS 426

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
                F  M+ +  E +   + +VL +C+ L  L  GK VH   ++ G   E   +  +L
Sbjct: 427 LVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITV-TSL 485

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           I+ YA+CG++ +   + +   ER+ + +  +I    + G + EA+    +M   GL P+ 
Sbjct: 486 IDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNE 545

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY-------SKCG-FKNL 451
            +    LSAC + G ++    I  ++     K E+     I+ Y       S+ G FK  
Sbjct: 546 ITFLGVLSACRHAGLVEEAWTIFKYM-----KTEYKMEPHIEHYYCIVELLSQAGCFKEA 600

Query: 452 AYLLFERIQQKSVVMWNSMI--CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
             L+ E   +    +WNS++  CG ++     E +N   +  L  L  D    +T
Sbjct: 601 EELIAEMPFEPDQTIWNSLLGACGTHKK---TELVNFIAERLLTTLPEDPSILVT 652



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 187/411 (45%), Gaps = 21/411 (5%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF------MW 63
           L  + ++H ++  +G       ++ L++SY+    L  +  +FD +    +       +W
Sbjct: 252 LVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLW 311

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             ++  Y+ N     +I L  ++    A + +F + S L+ C +L +   G +V G  + 
Sbjct: 312 NSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVT 371

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G++ D V+ + ++  Y   G + DA ++F ++  +D+V WSS+I+        S    +
Sbjct: 372 SGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSL 431

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  MV   +E D   + S+ +AC  L  L   + +H   ++   + +     S I +Y+K
Sbjct: 432 FRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAK 491

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG++      F    +R T  +T +I    ++G   +A+  F +M+E+  +PN IT + V
Sbjct: 492 CGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGV 551

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP------ALIEFYAECGKMSECEKVIH 357
           L +C   G + E  ++      K M  EY  + P       ++E  ++ G   E E++I 
Sbjct: 552 LSACRHAGLVEEAWTIF-----KYMKTEYK-MEPHIEHYYCIVELLSQAGCFKEAEELIA 605

Query: 358 AIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            +  E +   WN L+   A     K  L   +  +    +P+  S+  +LS
Sbjct: 606 EMPFEPDQTIWNSLLG--ACGTHKKTELVNFIAERLLTTLPEDPSILVTLS 654



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 2/181 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD    ++ I+ C        G+ +H  +I  GV  D++    L  MY     L+ A+R+
Sbjct: 1   MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWACSHSGS 615
           FD   ERNV +W+ MI  Y   G+ + A   + QML+S  + PN   +  +L AC   G 
Sbjct: 61  FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           +E GK     +    +  D      ++D+  + G +  A K+   +  P++ S W  +++
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTS-WNTMIS 179

Query: 676 G 676
           G
Sbjct: 180 G 180


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 202/559 (36%), Positives = 306/559 (54%), Gaps = 34/559 (6%)

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT-SWTAMISCYN 273
           A+ +H  +LR  +     L ++ + +YS    L  +   F  +    TT +W ++I CY 
Sbjct: 24  AKQLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
             G F  +L  F++ML   + P+     +VL SC  +  LR G+SVH  IIR GMG +  
Sbjct: 83  SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDL- 141

Query: 334 YLGPALIEFYAEC---------------GKMSEC--------------EKVIHAIGERNI 364
           Y   AL+  Y++                GK S+                KV   + +R+I
Sbjct: 142 YTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDI 201

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SWN +IS  A+ GM ++AL ++ +M    L PDSF+++S L       +L  G +IHG+
Sbjct: 202 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 261

Query: 425 VIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
            I+     D F+ SSLIDMY+KC   + +  +F  + Q   + WNS+I G  QNG   E 
Sbjct: 262 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +  F QM +  ++ + V+F + + AC+++  L  GK +H  +I      +++I +AL DM
Sbjct: 322 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 381

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG+++TA+ +FD M   ++VSW+AMI  Y +HG   DA SLFK+M   G+KPN V F
Sbjct: 382 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 441

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           M +L ACSH+G V+E   YFN+M + + + P L+HYA + DLL R G +E A++ I  M 
Sbjct: 442 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 501

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
               GS+W  LL  CR+HK I++ + + K+L      + G Y LLSNIY+  G W +  K
Sbjct: 502 IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARK 561

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +R  M   G+KK P  S I
Sbjct: 562 LRIAMRDKGMKKKPACSWI 580



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 252/526 (47%), Gaps = 35/526 (6%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           ++L+  SS+      +++H +I++       ++ T IL  Y     L D+  +F+ + S 
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 160 DV-VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
              ++W SII  Y  +      L  F  M+  G  PD     S+ ++C  +  LR   S+
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSK------------------CGDLLSAE--------- 251
           HG ++R  +  D    N+ + MYSK                    D+ S +         
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188

Query: 252 --RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
             + F  + KR   SW  +IS   ++G  + AL    +M      P+  TL +VL   A 
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
              L +GK +H   IR G   +  ++G +LI+ YA+C ++ +  +V + + + + +SWN 
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADV-FIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNS 307

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I+   + GM  E L+   QM    + P+  S +S + AC ++ +L LG Q+HG++I+  
Sbjct: 308 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 367

Query: 430 CK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              + F+ S+L+DMY+KCG    A  +F++++   +V W +MI G+  +G++ +AI+LF 
Sbjct: 368 FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFK 427

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKC 547
           +M +  ++ + V F+  + ACS+ G +++  K+ +     Y +   +    A+ D+  + 
Sbjct: 428 RMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRV 487

Query: 548 GDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           G L+ A      M  E     WS ++    +H  +  A  + K++ 
Sbjct: 488 GRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLF 533



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 210/429 (48%), Gaps = 32/429 (7%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM-WAVLIKCYMWN 73
           +LHA +L T L   P   + ++  Y+ +  L  S L+F++   P + + W  +I+CY  +
Sbjct: 26  QLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             F  S+  + +M+       + ++PSVL++C+ + DL  GE VHG II+ G   D    
Sbjct: 85  GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144

Query: 134 TSILCTYGEFGCLDDA-----------------------------RKVFDKMTSRDVVSW 164
            +++  Y +F  L++                              RKVF+ M  RD+VSW
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSW 204

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
           +++I+    N    + L M   M    + PD  T+ S+     E  +L   + IHG+ +R
Sbjct: 205 NTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 264

Query: 225 RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
                D  +G+S I MY+KC  +  + R F  + +    SW ++I+   ++G F + L+ 
Sbjct: 265 NGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKF 324

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F +ML  K +PN ++  +++ +CA L  L  GK +H  IIR        ++  AL++ YA
Sbjct: 325 FQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNV-FIASALVDMYA 383

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG +     +   +   +++SW  +I  YA  G + +A+ L  +M+  G+ P+  +  +
Sbjct: 384 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 443

Query: 405 SLSACGNVG 413
            L+AC + G
Sbjct: 444 VLTACSHAG 452



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 198/447 (44%), Gaps = 40/447 (8%)

Query: 37  ESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNF 96
           ESY  +GSLR    VF+   + D   W  +I     N   E+++++  +M        +F
Sbjct: 182 ESYY-LGSLRK---VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSF 237

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
              SVL   +   +L  G+++HG  I+ G+D D  I +S++  Y +   +DD+ +VF  +
Sbjct: 238 TLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML 297

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
              D +SW+SIIA    N    EGLK F  M+   ++P+ V+  S+  AC  L +L   +
Sbjct: 298 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            +HG+++R +   +  + ++ + MY+KCG++ +A   F K+E     SWTAMI  Y   G
Sbjct: 358 QLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG 417

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
               A+  F +M     +PN +  + VL +C+  G + E       + +       DY  
Sbjct: 418 HAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ-------DYRI 470

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
              +E YA    +                          R G  +EA E +  M    + 
Sbjct: 471 IPGLEHYAAVADL------------------------LGRVGRLEEAYEFISDMH---IE 503

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           P     ++ L+AC    +++L  ++   +  +D ++      L ++YS  G    A  L 
Sbjct: 504 PTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL- 562

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEA 483
            RI  +   M     C + +  N + A
Sbjct: 563 -RIAMRDKGMKKKPACSWIEIKNKVHA 588



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 108/208 (51%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+F    NL K   +H + +  G   D    + LI+ YA+   +  S  VF    + D 
Sbjct: 243 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDG 302

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I   + N  F+E +  + +M+  +   ++  + S++ AC+ L  L  G+++HG 
Sbjct: 303 ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGY 362

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           II+  FD +  I ++++  Y + G +  AR +FDKM   D+VSW+++I  Y  +    + 
Sbjct: 363 IIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDA 422

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGE 208
           + +F  M  EGV+P++V  +++  AC  
Sbjct: 423 ISLFKRMEVEGVKPNYVAFMAVLTACSH 450



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 2/150 (1%)

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SE 562
           T +Q  S++    + K +H +++   +     + T L+ +Y+    L  +  +F+S+ S 
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILS-IYSNLNLLHDSLLIFNSLPSP 68

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
              ++W ++I CY  HG    + S F QML SG  P+   F ++L +C+    +  G+  
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
              +   G+  DL     ++++ S+   +E
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLE 158



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 54/109 (49%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MP     T L    +LH +++ +    +   ++ L++ YA+ G++R++R +FD  +  D 
Sbjct: 344 MPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDM 403

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W  +I  Y  +    ++I L+ +M  E    +   + +VL ACS  G
Sbjct: 404 VSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAG 452


>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g47840
 gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
 gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 706

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/603 (31%), Positives = 327/603 (54%), Gaps = 7/603 (1%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLS 201
           G L  AR+VFDKM   D+VSW+SII  Y    +  E L +F +M  V   V PD   +  
Sbjct: 54  GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           + +ACG+  ++    S+H + ++  +     +G+S + MY + G +  + R F ++  R 
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             +WTA+I+    +G +++ L  F +M   +E  +  T    L +CAGL  ++ GK++H 
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            +I +G       +  +L   Y ECG+M +   +   + ER+++SW  LI  Y R G   
Sbjct: 234 HVIVRGFVTTL-CVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
           +A+E  ++M+   + P+  + AS  SAC ++  L  G Q+H +V+ +   D   V +S++
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MYS CG    A +LF+ ++ + ++ W+++I G+ Q G   E    F  M  +  +  + 
Sbjct: 353 KMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              + +    N+  +E G+ VH   + +G+ ++  + ++L +MY+KCG ++ A  +F   
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET 472

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
              ++VS +AMI+ Y  HG+  +A  LF++ L  G +P+ VTF+++L AC+HSG ++ G 
Sbjct: 473 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGF 532

Query: 621 FYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            YFN M+  + + P  +HY CMVDLL R+G +  A KMI+ M +  +  +W  LL  C+ 
Sbjct: 533 HYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKA 592

Query: 680 HKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
              I+   +  E+ L +  T      T L+NIY+  GN +E   VR  M+  G+ K PG+
Sbjct: 593 KGDIERGRRAAERILELDPTCATALVT-LANIYSSTGNLEEAANVRKNMKAKGVIKEPGW 651

Query: 739 STI 741
           S+I
Sbjct: 652 SSI 654



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 187/690 (27%), Positives = 328/690 (47%), Gaps = 59/690 (8%)

Query: 25  LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYH 84
           + +DP +  R   S    G+LR++R VFD     D   W  +IK Y+  N  +E+++L+ 
Sbjct: 39  VKFDPNSHLR---SLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFS 95

Query: 85  KM--IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
            M  +    +    +   VL+AC    ++  GE +H   +K        + +S+L  Y  
Sbjct: 96  AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G +D + +VF +M  R+ V+W++II          EGL  F  M R     D  T    
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            +AC  L  ++  ++IH HV+ R       + NS   MY++CG++      F  + +R  
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SWT++I  Y R G   KA+E+F+KM   +  PN  T  ++  +CA L  L  G+ +HC 
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           ++  G+      +  ++++ Y+ CG +     +   +  R+I+SW+ +I  Y + G  +E
Sbjct: 336 VLSLGLNDSLS-VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
             +    M+  G  P  F++AS LS  GN+  ++ G Q+H   +     ++  V+SSLI+
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MYSKCG    A ++F    +  +V   +MI G+ ++G S EAI+LF +        D VT
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           F++ + AC++ GQL+ G   H+    + + ++ Y             +++ A+       
Sbjct: 515 FISVLTACTHSGQLDLG--FHY----FNMMQETY-------------NMRPAKE------ 549

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
                 +  M+D     G+L+DA  +  +M     K ++V +  +L AC   G +E G+ 
Sbjct: 550 -----HYGCMVDLLCRAGRLSDAEKMINEM---SWKKDDVVWTTLLIACKAKGDIERGRR 601

Query: 622 YFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI----W------ 670
              A RI  ++P        + ++ S +G++E A  +  +M   A G I    W      
Sbjct: 602 A--AERILELDPTCATALVTLANIYSSTGNLEEAANVRKNM--KAKGVIKEPGWSSIKIK 657

Query: 671 ---GALLNGCRIHKRIDVMKTIEKELSVTG 697
               A ++G R H + + +  I  EL+V+G
Sbjct: 658 DCVSAFVSGDRFHPQSEDIYNI-LELAVSG 686



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 149/619 (24%), Positives = 267/619 (43%), Gaps = 49/619 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA+ + T L       + L++ Y  +G +  S  VF      ++  W  +I   +    
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR 189

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           ++E +  + +M R +     + +   L+AC+ L  +  G+ +H  +I  GF     +  S
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANS 249

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y E G + D   +F+ M+ RDVVSW+S+I +Y       + ++ F  M    V P+
Sbjct: 250 LATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPN 309

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+  AC  L  L     +H +VL   +     + NS + MYS CG+L+SA   F 
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R   SW+ +I  Y ++G+ ++  + F  M +   +P    L ++L     +  +  
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ VH   +  G+  +   +  +LI  Y++CG + E   +       +I+S   +I+ YA
Sbjct: 430 GRQVHALALCFGL-EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
             G SKEA++L  +    G  PDS +  S L+AC + G L LG                 
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH--------------- 533

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
                       + N+    +     K    +  M+    + G   +A  + ++M     
Sbjct: 534 ------------YFNMMQETYNMRPAKE--HYGCMVDLLCRAGRLSDAEKMINEM---SW 576

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + D+V + T + AC   G +E+G+    +++         + T L ++Y+  G+L+ A  
Sbjct: 577 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVT-LANIYSSTGNLEEAAN 635

Query: 556 VFDSMSERNVVS---WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           V  +M  + V+    WS++        ++ D  S F  +      P      NIL   + 
Sbjct: 636 VRKNMKAKGVIKEPGWSSI--------KIKDCVSAF--VSGDRFHPQSEDIYNIL-ELAV 684

Query: 613 SGSVEEGKFYFNAMRIFGV 631
           SG+ E  +F     R FGV
Sbjct: 685 SGA-EAHRFDCTLKRAFGV 702



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 176/380 (46%), Gaps = 6/380 (1%)

Query: 4   FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            ++C  LR++     +H H++V G       +  L   Y E G ++    +F+   E D 
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  LI  Y       +++  + KM   Q   +   + S+  AC+SL  L  GE++H  
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++  G +    +  S++  Y   G L  A  +F  M  RD++SWS+II  Y       EG
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            K F  M + G +P    + SL    G +  +   R +H   L   ++ +  + +S I M
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG +  A   F + ++    S TAMI+ Y   G  ++A++ F K L+V   P+ +T 
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           I+VL +C   G L  G      +     M P  ++ G  +++     G++S+ EK+I+ +
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYG-CMVDLLCRAGRLSDAEKMINEM 574

Query: 360 G-ERNILSWNMLISEYARKG 378
             +++ + W  L+     KG
Sbjct: 575 SWKKDDVVWTTLLIACKAKG 594


>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
 gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
          Length = 703

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 186/560 (33%), Positives = 309/560 (55%), Gaps = 11/560 (1%)

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDL 247
           R  V  D  T   L  AC  L SL   R++H   +R      D  +  + + MY++CGD+
Sbjct: 90  RLRVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDM 149

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML---EVKEEPNLITLITVL 304
           + A   +  +EK      T++++ Y ++G  ++ALE F + +    V   P  +TL++ +
Sbjct: 150 VGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTP--VTLVSAM 207

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERN 363
            + A LG +R+G++ H  ++R  +G  YD  L   ++ FY + G      ++   + +R+
Sbjct: 208 SAAAQLGHVRKGQACHAYVVRNSLG--YDLALVNTVLSFYVKIGDFQASMRLFEGMTDRD 265

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           +++W+ +I  Y + G + E L +  +M    + P+S ++ S L AC  V   + G ++H 
Sbjct: 266 VITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHR 325

Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
             + I C+ E  V ++L+DMY KC     A  LF R+ +K VV W ++I G  QN    E
Sbjct: 326 VAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGE 385

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           ++++F  M L+    D +T +  + ACS  G       +H  L+  G   + ++  AL D
Sbjct: 386 SLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLD 445

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           +Y+KCGD+ +A RVF+  +E+++V W +MI  YG HG   +A +L+++M+ S I+PN VT
Sbjct: 446 LYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVT 505

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L ACSHSG V+EG   F++M ++FGV P+ +H + MVDLL R+G+++ A + I  M
Sbjct: 506 FVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGM 565

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
              A    W ALL  CR H    + K   K L     +  GYY LL+NIYA +  W+   
Sbjct: 566 DGRAVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVK 625

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
             R ++    L+KVPGYS++
Sbjct: 626 DTRDMVRGRDLRKVPGYSSV 645



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 302/597 (50%), Gaps = 14/597 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA+LL +GL +     T  + ++   G  R    +FD F  P   +   L++ ++    
Sbjct: 24  LHANLLRSGLLHSSHHLTAHVLAWYPPGLARD---LFDEFPSPTPRLANALLRAHIRARQ 80

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDDVIQT 134
           +  +ILL  ++   +  +  F +  +LRAC++L  L  G  VH   I+ C   +D  + T
Sbjct: 81  WRAAILLGPRL---RVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVAT 137

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVREGVE 193
           +I+  Y   G +  A   +  +   D+V  +S++  Y  N    E L+ F  ++V +GV 
Sbjct: 138 AIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVM 197

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
              VT++S   A  +L  +R  ++ H +V+R  +  D  L N+ +  Y K GD  ++ R 
Sbjct: 198 LTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRL 257

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +  R   +W+ MI  Y + G   + L  + +M++ + +PN +TL++VL +CA +   
Sbjct: 258 FEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDA 317

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            EGK VH   +  G   E   +  AL++ Y +C    E   + H + ++++++W  +I  
Sbjct: 318 EEGKRVHRVAVSIGCELEVG-VATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGG 376

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
             +  +  E+L +   M     +PD+ ++   L+AC   G  +L + +HG++++    + 
Sbjct: 377 LTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNN 436

Query: 434 -FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            FV ++L+D+YSKCG  + A  +FE   +K +V+W SMI G+  +G   EA+ L+ +M  
Sbjct: 437 AFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIA 496

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQ 551
           + ++ + VTF++ + ACS+ G +++G  +   +   +GV  +    +A+ D+  + G+LQ
Sbjct: 497 SSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQ 556

Query: 552 TAQRVFDSMSERNVV-SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            A R    M  R V  +W A++     H     +    K +L   + P+ V + N+L
Sbjct: 557 EAIRFIRGMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLK--LDPDHVGYYNLL 611



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 202/387 (52%), Gaps = 6/387 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           ++RK    HA+++   L YD      ++  Y ++G  ++S  +F+   + D   W+ +IK
Sbjct: 215 HVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIK 274

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y+ +    E + +Y +M++ +   ++    SVL+AC+ + D   G++VH   +  G + 
Sbjct: 275 GYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCEL 334

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  + T+++  Y +  C ++A  +F +M  +DVV+W+++I     N    E L +F  M+
Sbjct: 335 EVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCML 394

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            +   PD +TM+ +  AC E    R A  +HG+++R     +  +  + + +YSKCGD+ 
Sbjct: 395 LDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDID 454

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           SA R F    ++    W +MI+ Y   G  Q+A+  + +M+    +PN +T ++VL +C+
Sbjct: 455 SAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACS 514

Query: 309 GLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL-S 366
             G ++EG  +   + +  G+ P  ++   A+++     G++ E  + I  +  R +  +
Sbjct: 515 HSGLVQEGIQIFDSMTQVFGVVPNAEH-QSAMVDLLGRAGELQEAIRFIRGMDGRAVAHT 573

Query: 367 WNMLIS---EYARKGMSKEALELLVQM 390
           W  L++   E+    MSK A + L+++
Sbjct: 574 WCALLAACREHNNTKMSKVAAKSLLKL 600


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 199/655 (30%), Positives = 347/655 (52%), Gaps = 32/655 (4%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDDVIQTSILCT-YGEFGCLDDAR 150
           + +F     L+ C + GD   G  VHG +++  G  + D+   ++L   YG+ G L  AR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACG 207
           ++FD+M  R++VS+ +++ ++    D      +F  +  EG E +     TML LA A  
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA-- 174

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            + +   A  +H    +     +  +G+  I  YS C  +  AE  F  I ++    WTA
Sbjct: 175 -MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH-CQIIRK 326
           M+SCY+ +   + A           +  +L+ +     SCA     R+G  +H C I  K
Sbjct: 234 MVSCYSENDCPENAFR-------CAQSCSLLAI-----SCA-----RQG--IHGCAI--K 272

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
            +     ++G AL++ YA+CG + +       I   +++  + +IS YA+   +++A EL
Sbjct: 273 TLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 332

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
            +++    ++P+ +S++S L AC N+  L  G QIH H IKI  + D FV ++L+D Y+K
Sbjct: 333 FLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAK 392

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           C   + +  +F  ++  + V WN+++ GF Q+G   EA+++F +M    +   +VT+ + 
Sbjct: 393 CNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSV 452

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++AC++   +     +H  +       D  I  +L D YAKCG ++ A +VF  + ER++
Sbjct: 453 LRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 512

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW+A+I  Y +HGQ  DA  LF +M  S ++ N++TF+ +L  C  +G V  G   F++
Sbjct: 513 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDS 572

Query: 626 MRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           MRI  G++P ++HY C+V LL R+G +  A + I  +P   +  +W ALL+ C IHK + 
Sbjct: 573 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 632

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           + +   +++      D   Y LLSN+YA  G+ D+   +R  M   G++KVPG S
Sbjct: 633 LGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 687



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/624 (24%), Positives = 305/624 (48%), Gaps = 30/624 (4%)

Query: 16  LHAHLLVTGL--HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +H H++  G     D   +  L+  Y ++G L S+R +FD   E +   +  L++ +   
Sbjct: 81  VHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQR 140

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             FE +  L+ ++  E   ++ F+  ++L+   ++   G    VH    K G D +  + 
Sbjct: 141 GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVG 200

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           + ++  Y     + DA  VF+ +  +D V W+++++ Y +N D  E              
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEN-DCPE-------------- 245

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
                    A++C  L      + IHG  ++     +  +G + + MY+KCGD+  A   
Sbjct: 246 ----NAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLA 301

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I        + MIS Y +S   ++A E F++++     PN  +L +VL +C  +  L
Sbjct: 302 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 361

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
             GK +H   I+  +G E D ++G AL++FYA+C  M    K+  ++ + N +SWN ++ 
Sbjct: 362 DFGKQIHNHAIK--IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVV 419

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-K 431
            +++ G+ +EAL +  +MQ   +     + +S L AC +  S++   QIH  + K     
Sbjct: 420 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN 479

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  + +SLID Y+KCG+   A  +F+ + ++ ++ WN++I G+  +G + +A+ LF +M 
Sbjct: 480 DTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN 539

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDL 550
            + +E +++TF+  +  C + G +  G  +   + I +G++  +   T +  +  + G L
Sbjct: 540 KSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRL 599

Query: 551 QTA-QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILW 608
             A Q + D  S  + + W A++    +H  +       +++L+  I+P +E T++ +  
Sbjct: 600 NDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE--IEPQDETTYVLLSN 657

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVE 632
             + +GS+++      +MR  GV 
Sbjct: 658 MYAAAGSLDQVALLRKSMRNIGVR 681



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 166/373 (44%), Gaps = 43/373 (11%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CTN+ +L    ++H H +  G   D      L++ YA+   + SS  +F + ++ +
Sbjct: 351 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 410

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  +  +   EE++ ++ +M   Q   +   Y SVLRAC+S   +    ++H 
Sbjct: 411 EVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 470

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I K  F+ D VI  S++ TY + G + DA KVF  +  RD++SW++II+ Y  +   ++
Sbjct: 471 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 530

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M +  VE + +T ++L   C   CS       HG  L   ++ID  +      
Sbjct: 531 ALELFDRMNKSNVESNDITFVALLSVC---CSTGLVN--HGLSLFDSMRIDHGI------ 579

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
                              K     +T ++    R+G    AL+ F+   ++   P+ + 
Sbjct: 580 -------------------KPSMEHYTCIVRLLGRAGRLNDALQ-FIG--DIPSAPSAMV 617

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC---EKVI 356
              +L SC     +  G+    +I+      E  Y+   L   YA  G + +     K +
Sbjct: 618 WRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYV--LLSNMYAAAGSLDQVALLRKSM 675

Query: 357 HAIGERNI--LSW 367
             IG R +  LSW
Sbjct: 676 RNIGVRKVPGLSW 688


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 183/540 (33%), Positives = 294/540 (54%), Gaps = 34/540 (6%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKE 293
           N+ ++ YSK G +   E TF K+  R   +W  +I  Y+ SG    A++++  M+ +   
Sbjct: 76  NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +TL+T+L   +  G +  GK +H Q+I+ G    Y  +G  L+  YA  G +S+ +
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF-ESYLLVGSPLLYMYANVGCISDAK 194

Query: 354 KVIHAIGERNIL------------------------------SWNMLISEYARKGMSKEA 383
           KV + + +RN +                              SW  +I   A+ G++KEA
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDM 442
           +E   +M+  GL  D +   S L ACG +G++  G QIH  +I+ + +D  +V S+LIDM
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y KC   + A  +F+R++QK+VV W +M+ G+ Q G + EA+ +F  M  + ++ D  T 
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
             AI AC+N+  LE+G   H K I+ G+   + +  +L  +Y KCGD+  + R+F+ M+ 
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           R+ VSW+AM+  Y   G+  +   LF +M+  G+KP+ VT   ++ ACS +G VE+G+ Y
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494

Query: 623 FNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           F  M   +G+ P + HY+CM+DL SRSG +E A + I+ MPFP +   W  LL+ CR   
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554

Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +++ K   + L     +    YTLLS+IYA +G WD   ++R  M    +KK PG S I
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 259/538 (48%), Gaps = 45/538 (8%)

Query: 81  LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY 140
           +++  +IR       F+Y +++ A + +       +V  RI +           ++L  Y
Sbjct: 27  MIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAY 82

Query: 141 GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG----VEPDF 196
            + G + +    F+K+  RD V+W+ +I  Y  +  V   +K +++M+R+          
Sbjct: 83  SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           +TML L+ + G + SL   + IHG V++   +    +G+  + MY+  G +  A++ F  
Sbjct: 143 MTMLKLSSSNGHV-SL--GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199

Query: 257 IEKRCT------------------------------TSWTAMISCYNRSGWFQKALESFV 286
           ++ R T                               SW AMI    ++G  ++A+E F 
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           +M     + +     +VL +C GLG + EGK +H  IIR     ++ Y+G ALI+ Y +C
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF-QDHIYVGSALIDMYCKC 318

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
             +   + V   + ++N++SW  ++  Y + G ++EA+++ + MQ  G+ PD +++  ++
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           SAC NV SL+ G Q HG  I         V +SL+ +Y KCG  + +  LF  +  +  V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            W +M+  + Q G ++E I LF +M  + L+ D VT    I ACS  G +EKG+     +
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498

Query: 526 IS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
            S YG+   I   + + D++++ G L+ A R  + M    + + W+ ++      G L
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 257/562 (45%), Gaps = 65/562 (11%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATI 93
           L+ +Y++ G +      F+   + D   W VLI+ Y  +     ++  Y+ M+R+  A +
Sbjct: 78  LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           +     ++L+  SS G +  G+++HG++IK GF+   ++ + +L  Y   GC+ DA+KVF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197

Query: 154 ----DKMT--------------------------SRDVVSWSSIIASYFDNADVSEGLKM 183
               D+ T                           +D VSW+++I     N    E ++ 
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M  +G++ D     S+  ACG L ++   + IH  ++R   +    +G++ I MY K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           C  L  A+  F +++++   SWTAM+  Y ++G  ++A++ F+ M     +P+  TL   
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           + +CA +  L EG   H + I  G+   Y  +  +L+  Y +CG + +  ++ + +  R+
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
            +SW  ++S YA+ G + E ++L  +M   GL PD  ++   +SAC   G ++ G     
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG----- 491

Query: 424 HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
                       Q     M S+ G               S+  ++ MI  F ++G   EA
Sbjct: 492 ------------QRYFKLMTSEYGI------------VPSIGHYSCMIDLFSRSGRLEEA 527

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +   + M       D + + T + AC N G LE GKW    LI           T L+ +
Sbjct: 528 MRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY-TLLSSI 583

Query: 544 YAKCGDLQTAQRVFDSMSERNV 565
           YA  G   +  ++   M E+NV
Sbjct: 584 YASKGKWDSVAQLRRGMREKNV 605



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 154/350 (44%), Gaps = 35/350 (10%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA ++ T         + LI+ Y +   L  ++ VFD  K+ +   W  ++  Y    
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 350

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE++ ++  M R      ++     + AC+++  L  G + HG+ I  G      +  
Sbjct: 351 RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSN 410

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  YG+ G +DD+ ++F++M  RD VSW++++++Y       E +++F  MV+ G++P
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP 470

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D VT+  +  AC     +   +                    F +M S+ G + S     
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRY------------------FKLMTSEYGIVPS----- 507

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
                     ++ MI  ++RSG  ++A+  F+  +     P+ I   T+L +C   G L 
Sbjct: 508 -------IGHYSCMIDLFSRSGRLEEAMR-FINGMPF--PPDAIGWTTLLSACRNKGNLE 557

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            GK     +I   + P +      L   YA  GK     ++   + E+N+
Sbjct: 558 IGKWAAESLIE--LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)

Query: 427 KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
           +I   + F  ++L+  YSK G  +     FE++  +  V WN +I G+  +G    A+  
Sbjct: 66  RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125

Query: 487 FHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           ++ M  +    +  VT +T ++  S+ G +  GK +H ++I  G    + + + L  MYA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185

Query: 546 KCGDLQTAQRVFDSMSERNV------------------------------VSWSAMIDCY 575
             G +  A++VF  + +RN                               VSW+AMI   
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
             +G   +A   F++M   G+K ++  F ++L AC   G++ EGK
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGK 290



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 24/211 (11%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C N+  L   ++ H   + +GL +    S  L+  Y + G +  S  +F+     D+  
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  Y       E+I L+ KM++            V+ ACS  G +  G++      
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR------ 493

Query: 123 KCGFDKDDVIQTSILCTYGEFGC----------LDDARKVFDKMT-SRDVVSWSSIIASY 171
              + K    +  I+ + G + C          L++A +  + M    D + W++++++ 
Sbjct: 494 ---YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550

Query: 172 FDNADVSEGLKMFHSMVR-EGVEPDFVTMLS 201
            +  ++  G     S++  +   P   T+LS
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 9/158 (5%)

Query: 506 IQACSNIGQLEKGKWV---HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           I+ C  +G   + ++V   H  +I      + ++   +   YA       A+RVFD + +
Sbjct: 10  IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KF 621
            N+ SW+ ++  Y   G +++  S F+++ D     + VT+  ++   S SG V    K 
Sbjct: 70  PNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKA 125

Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           Y   MR F           M+ L S +G +    K IH
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLG-KQIH 162


>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
          Length = 674

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 196/606 (32%), Positives = 337/606 (55%), Gaps = 12/606 (1%)

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           +D  R++FD M  R+VVSW+++   Y       E L++F  M+ +G  P  V+ +++  A
Sbjct: 33  VDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPA 92

Query: 206 CGELCSLRPARSIHGHVLRRKIKI--DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
                   P + ++G +++  ++   D  + +S I M+S+ GD+ SA R F +  K+ T 
Sbjct: 93  AVADDPSWPFQ-LYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTE 151

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQ 322
            W  MI+ Y ++G F +A++ F K+L  +E P +++T ++ L + +    +  G+ +H  
Sbjct: 152 VWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGY 211

Query: 323 IIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           +I KGM       LG AL+  Y+ CG +     +   + E++I++WN +++ + +     
Sbjct: 212 LI-KGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDL 270

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLID 441
           E L L+ +MQ  G   DS ++ + LSA  N G LQ+G Q HG++I+   + E ++S LID
Sbjct: 271 EGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLESYLID 330

Query: 442 MYSKCGFKNLAYLLFERIQ--QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           MY+K G   +A  +F+  +  ++  V WN+MI G+ Q+G   +AI +F  M    LE   
Sbjct: 331 MYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTS 390

Query: 500 VTFLTAIQACSNIGQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           VT  + + AC  +G  +  GK +H   +   +  ++++ TAL DMY+KCG++ TA+ VF 
Sbjct: 391 VTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFG 450

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
            M+ ++ V+++ MI   G HG    A +LF  M + G+KP+ VTF++ + AC++SG V+E
Sbjct: 451 GMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDE 510

Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGC 677
           G   + +M  FG+    QH+ C+ DLL+++G +E A++ I  +    N  +IWG+LL  C
Sbjct: 511 GLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASC 570

Query: 678 RIHKRIDVMKTIEKELSVTGTN--DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKV 735
           +   + ++ K + K+L          GY  LLS + A E NW+    +R  M   GLKK 
Sbjct: 571 KAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKE 630

Query: 736 PGYSTI 741
            G S I
Sbjct: 631 AGSSWI 636



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 248/474 (52%), Gaps = 24/474 (5%)

Query: 15  RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +L+  L+  G+ Y  D    +  I+ ++E G ++S+R VFD   + ++ +W  +I  Y+ 
Sbjct: 103 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 162

Query: 73  NNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           N  F E+I L+ K++   +  +    + S L A S   D+  G+++HG +IK       V
Sbjct: 163 NGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPV 222

Query: 132 I-QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           I   +++  Y   G +  A  +FD++  +D+V+W++++ ++  N    EGL + + M + 
Sbjct: 223 ILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKS 282

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G   D VT+ ++  A      L+  +  HG+++R  I+ +G L +  I MY+K G +  A
Sbjct: 283 GFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMA 341

Query: 251 ERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +R F   K  KR   +W AMI+ Y +SG  +KA+  F  MLE   EP  +TL +VL +C 
Sbjct: 342 QRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACD 401

Query: 309 GL-GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
            + G +  GK +HC  +R+ +     ++G ALI+ Y++CG+++  E V   +  ++ +++
Sbjct: 402 PVGGGVYSGKQIHCFAVRRCLDTNV-FVGTALIDMYSKCGEITTAENVFGGMTGKSTVTY 460

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
             +IS   + G  K+AL L   MQ  GL PD+ +  S++SAC   G +  GL ++  +  
Sbjct: 461 TTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSM-- 518

Query: 428 IDCKDEFVQSS-------LIDMYSKCGFKNLAYLLFERIQQKS--VVMWNSMIC 472
               D F  S+       + D+ +K G    AY   E + ++   V +W S++ 
Sbjct: 519 ----DSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLA 568


>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 680

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 209/675 (30%), Positives = 341/675 (50%), Gaps = 43/675 (6%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR C+++     G  +H  + K G   D  +  +++  Y EF  + DA KVFD+MT R++
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           V+W+++++++ D     E +++++ M +    P+     ++ +ACG +  L   + I   
Sbjct: 70  VTWTTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVGDLGLGKLIQER 128

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF--- 278
           +   K++ D  L NS + M+ KCG L  A   F  I +  TT+W  ++S Y+++G     
Sbjct: 129 IYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA 188

Query: 279 ---------------------------QKALESFVKMLEVK-EEPNLITLITVLGSCAGL 310
                                      Q+ALE FV M+  +  + +  T    L   A  
Sbjct: 189 EKLFHCMPHPNVVSWNSMIAGFADNGSQRALE-FVSMMHKRCIKLDDFTFPCALKISALH 247

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI------HAIGERNI 364
           G L  GK VH  + + G       L  ALI+ Y+ C  + E  K+       +A    N+
Sbjct: 248 GLLFIGKQVHSYVTKLGYESSCFTLS-ALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
             WN ++S Y      + AL LL ++   G + DS++   +L  C N+ S ++GLQ+HG 
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366

Query: 425 VIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           ++    + D  V S L+D+Y+K    + A  +F R+ +K ++ W+ +I G  Q G +  A
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLA 426

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
            ++F  M     E+D     T ++ CSN+  L  GK VH   +  G   + +  T+L DM
Sbjct: 427 FSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDM 486

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCG+++ A  +F    E+++VSW+ +I   G +G+  +A   F +M+ SGI PNE+TF
Sbjct: 487 YSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITF 546

Query: 604 MNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + +L AC ++G VEE +  FN+M+ ++G+EP L+HY CMVDLL+  G  E A K+I +MP
Sbjct: 547 LGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMP 606

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
           F  N + W  LL  C       ++  +   L     ND   Y  LSN YA  G W    K
Sbjct: 607 FEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYVTLSNAYASLGMWHTLSK 666

Query: 723 VRSIMEVTGLKKVPG 737
            R   +  G+KK PG
Sbjct: 667 AREASKKFGIKK-PG 680



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 170/644 (26%), Positives = 299/644 (46%), Gaps = 56/644 (8%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            R C  +R   R   +HA+L   G   D   +  LI  YAE  ++R +  VFD   + + 
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  +       E+I LY+ M + + T + ++Y +VL+AC  +GDLG G+ +  R
Sbjct: 70  VTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGKLIQER 128

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I +     D ++  S++  + + G L+DA +VF  ++     +W+ I++ Y     + E 
Sbjct: 129 IYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA 188

Query: 181 LKMFHSMVREGVEP-----------------DFVTMLSLAEACGEL------CSLRPA-- 215
            K+FH M    V                   +FV+M+   + C +L      C+L+ +  
Sbjct: 189 EKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMH--KRCIKLDDFTFPCALKISAL 246

Query: 216 -------RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS---- 264
                  + +H +V +   +      ++ I MYS C DL+ A + F +      +     
Sbjct: 247 HGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306

Query: 265 --WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
             W +M+S Y  +   Q AL    ++       +  T    L  C  L   R G  +H  
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366

Query: 323 IIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           I+    G E DY +G  L++ YA+   + +   + H +  ++I++W+ LI   A+ G++ 
Sbjct: 367 IVT--CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNW 424

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLI 440
            A  +   M       D F +++ L  C N+ SL+ G Q+H   +K   + E F  +SL+
Sbjct: 425 LAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLL 484

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMYSKCG    A  LF   Q+K +V W  +I G  QNG + EA+  FH+M  + +  +E+
Sbjct: 485 DMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEI 544

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           TFL  + AC   G +E+ + + + + S YG+   +     + D+ A  G  + A+++  +
Sbjct: 545 TFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIAN 604

Query: 560 MS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK--PNE 600
           M  E N  +W  ++   G  G  ND   L  ++ D  ++  PN+
Sbjct: 605 MPFEPNQTTWRTLL---GACGTRND-TKLINRVADGLLEATPND 644



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 9/187 (4%)

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           MY+N +  D       ++ C+ +   ++G  +H  L  +G   D+++   L  MYA+  +
Sbjct: 1   MYVNIIAKD-------LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFN 53

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A++VFD M++RN+V+W+ M+  +   G+  +A  L+  M  S   PN   +  +L A
Sbjct: 54  VRDAEKVFDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKA 112

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           C   G +  GK     +    ++ D      ++D+  + G +  A ++ H++   A  + 
Sbjct: 113 CGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS-RATTTT 171

Query: 670 WGALLNG 676
           W  +++G
Sbjct: 172 WNIIVSG 178


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 226/816 (27%), Positives = 380/816 (46%), Gaps = 127/816 (15%)

Query: 3   LFRSCTNLRKLTRLHAHLL-VTGLHYDPPASTRLIESYAE-MGSLRSSRLVFDTFKEPDS 60
           L   C+ L +  ++HA ++ +  L +      +L+  Y +   SL  +R + D       
Sbjct: 89  LLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTV 148

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             +A LI+ Y  +  ++E    +  M+ E      ++ P++L+ACS++     G+ VHG 
Sbjct: 149 PAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGF 208

Query: 121 IIK-------------------CG------------FDKDDVIQTSILCTYGEFGCLDDA 149
           +I+                   CG             ++D V  T+++  Y E G  D+A
Sbjct: 209 VIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEA 268

Query: 150 RKVFDKM----TSRDVVSWSSIIASYFDNADVS--------------------------- 178
           + +F  M       D++SWS++++ +  N ++                            
Sbjct: 269 KHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISG 328

Query: 179 --------EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
                   + L MF  M+    +P+ +T+ S+  AC  L +LR  ++IH    +  I  +
Sbjct: 329 CVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGN 388

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             +  S I MYSKCG    AE+ F K E + T  W  MI+ Y   G  + AL     M +
Sbjct: 389 VYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQK 448

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              +P++IT  T+L   A  G   +   +  ++++ G+ P                    
Sbjct: 449 DGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKP-------------------- 488

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT------------WGLMPD 398
                       N++S+N+LIS + + G+S EAL++   MQ+              + P+
Sbjct: 489 ------------NVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPN 536

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFE 457
             ++  +L AC ++     G +IHG+ ++   +   FV S+L+DMY+KC   + A  +F 
Sbjct: 537 PITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFF 596

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           RI  ++ V WN+++ G+  N    EA+ LF +M    L+   +TF+    AC +I  +  
Sbjct: 597 RIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRF 656

Query: 518 GKWVHHKLISYGVRKDI-----YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G+ +H     Y  +  +      I +AL DMYAKCG +  A+ VFDS  E++V  W+AMI
Sbjct: 657 GRGLH----GYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMI 712

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGV 631
             + +HG   +A ++F QM   GI P+ +TF+++L AC+  G VEEG  YFN+M I +GV
Sbjct: 713 SAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGV 772

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
              L+HY CMV +L  +G ++ A   I  MP+P +  +W  LL  CR+H   ++ +   K
Sbjct: 773 AATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAK 832

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            L     ++   Y LLSNIY   G WD    +RS M
Sbjct: 833 ALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFM 868



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 225/478 (47%), Gaps = 36/478 (7%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLR-RKIKIDGPLGNSFIVMYSKCG-DLLSAERTFVKI 257
           +SL   C  L   R    IH  V++   +K    +GN  +V+Y K    L  A +   +I
Sbjct: 87  ISLLNRCSTLSEFR---QIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEI 143

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
             R   ++ A+I  Y RS  + +    F  M+     P+   + T+L +C+ +   R GK
Sbjct: 144 PNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGK 203

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            VH  +IRK +  +  ++G ALI FY+ CG +     V H++ ER+++SW  LIS Y  +
Sbjct: 204 MVHGFVIRKSVESDV-FVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEE 262

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS 437
           G+  EA  +   MQ  G+ PD  S ++ LS     G + L L+                 
Sbjct: 263 GLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALE----------------- 305

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           +L +M              ER  Q +V  WN +I G  QNG   +A+++F +M     + 
Sbjct: 306 TLEEMP-------------ERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDP 352

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           + +T  + + AC+ +  L  GK +H     +G+  ++Y++ ++ DMY+KCG    A++VF
Sbjct: 353 NIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVF 412

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
                +N   W+ MI  Y   G++ DA  L + M   G KP+ +T+  IL   + +G   
Sbjct: 413 XKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKT 472

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           +     + M   G++P++  +  ++    +SG    A K+   M  P++G     +LN
Sbjct: 473 QAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLN 530



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 261/580 (45%), Gaps = 58/580 (10%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDK-DDVIQTSILCTYGEFG-CLDDARKVFDKMT 157
           S+L  CS+L +     ++H R++K    K    I   ++  Y +    L+DARK+ D++ 
Sbjct: 88  SLLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIP 144

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +R V +++++I SY  +    E    F  MV EG+ PD   + ++ +AC  +   R  + 
Sbjct: 145 NRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKM 204

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HG V+R+ ++ D  +GN+ I  YS CGDL S+   F  +++R   SWTA+IS Y   G 
Sbjct: 205 VHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGL 264

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
             +A   F  M     +P+LI+   +L   A  G +        ++  +G+ P  +    
Sbjct: 265 XDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVN---- 320

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
                                       SWN +IS   + G  ++AL++  +M  +   P
Sbjct: 321 ----------------------------SWNGIISGCVQNGYLEDALDMFSRMLWYPEDP 352

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  ++AS L AC  + +L+LG  IH    K     + +V+ S+IDMYSKCG  + A  +F
Sbjct: 353 NIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVF 412

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
            + + K+  MWN MI  +   G   +A+ L   M  +  + D +T+ T +   +  G   
Sbjct: 413 XKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKT 472

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +   +  +++  G++ ++     L   + + G    A +VF  M                
Sbjct: 473 QAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIM---------------- 516

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
              Q         ++L+  ++PN +T    L AC+      +GK         G EP++ 
Sbjct: 517 ---QSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIF 573

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             + +VD+ ++  D++ A K+   +    N   W AL+ G
Sbjct: 574 VSSALVDMYAKCHDMDSANKVFFRID-GRNTVSWNALMAG 612


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 180/601 (29%), Positives = 326/601 (54%), Gaps = 8/601 (1%)

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG---VEPDFVTMLSL 202
           L DAR +FD++  RD VSW++II+ Y +++D SE L++F  M  +    ++P F+  L L
Sbjct: 65  LKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDP-FLLSLGL 123

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            + CG   +     ++HG  ++  +     +G++ + MY K G++  + + F ++  R  
Sbjct: 124 -KTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +WTA+I+   R+G+ +  L  F  M   K E +       L + A  G L  G+S+H Q
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQ 242

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            ++KG   E  ++  +L   Y +CGK+         +   +++SW  +++ Y + G    
Sbjct: 243 TLKKGF-DENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLID 441
            L+   +M+   ++P+ ++ ++ +S C N   L+ G Q+H HV+ +   +   V +S++ 
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT 361

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +YSKCG       +F  ++ + ++ W+++I  + Q G   EA     +M     + +E  
Sbjct: 362 LYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFA 421

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             + +  C ++  LE+GK +H  ++S G+ +   + +AL  MYAKCG +  A ++F    
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           + +++SW+AMI  Y  HG   +A  LF+ +   G++P+ VTF+ +L ACSH+G V+ G +
Sbjct: 482 KDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFY 541

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           YFN+M + + + P  +HY CM+DLL R+G +  A  +I SMP   +  +W  LL  CRIH
Sbjct: 542 YFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIH 601

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
             +D  +    E+     N  G +  L+NI+A +G W E   +R +M+  G+ K PG+S+
Sbjct: 602 GDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSS 661

Query: 741 I 741
           +
Sbjct: 662 V 662



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 287/578 (49%), Gaps = 21/578 (3%)

Query: 45  LRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLR 103
           L+ +R +FD   + D   W  +I  Y+ ++   E++ L+ KM ++ +  I  F+    L+
Sbjct: 65  LKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLK 124

Query: 104 ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
            C    +   G  +HG  +K G      + +++L  Y + G +  + KVFD+M +R+ V+
Sbjct: 125 TCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVT 184

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+++I           GL  F  M R  VE D        +A  +  +L   RSIH   L
Sbjct: 185 WTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTL 244

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           ++    +  + NS   MY+KCG L     TF K+      SWT +++ Y + G     L+
Sbjct: 245 KKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQ 304

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
           +F +M      PN  T   V+  CA    L+ G+ +H  ++  G       +  +++  Y
Sbjct: 305 AFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS-VANSIMTLY 363

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
           ++CG+++   KV  ++  R+I++W+ +I+ Y++ G  +EA E L +M++ G  P+ F++A
Sbjct: 364 SKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALA 423

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           S LS CG++  L+ G Q+H HV+ +  +    V S+LI MY+KCG    A  +F    + 
Sbjct: 424 SVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKD 483

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            ++ W +MI G+ ++G+S EAI LF  +    L  D VTF+  + ACS+ G ++ G +  
Sbjct: 484 DIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYF 543

Query: 523 HKLISYGVRKDIYIDTA------LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCY 575
           + +      KD +I  +      + D+  + G L  A+ +  SM  + + V WS ++   
Sbjct: 544 NSM-----SKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRAC 598

Query: 576 GMHGQLN----DAASLFKQMLDSGIKPNEVTFMNILWA 609
            +HG ++     AA + K  LD       +T  NI  A
Sbjct: 599 RIHGDVDCGQRAAAEVLK--LDPNCAGTHITLANIFAA 634



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 200/406 (49%), Gaps = 1/406 (0%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           T LH   + TGL       + L++ Y ++G +  S  VFD     ++  W  +I   +  
Sbjct: 136 TNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA 195

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            + E  +  +  M R +    ++ Y   L+A +  G L  G  +H + +K GFD++  + 
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            S+   Y + G LD     F KM + DVVSW++I+ +Y        GL+ F  M    V 
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T  ++   C     L+    +H HVL         + NS + +YSKCG+L S  + 
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  ++ R   +W+ +I+ Y++ G+ ++A E   +M     +PN   L +VL  C  +  L
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +GK +H  ++  G+  +   +  ALI  YA+CG ++E  K+     + +I+SW  +IS 
Sbjct: 436 EQGKQLHAHVLSVGL-EQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           YA  G S+EA+EL   +Q  GL PDS +    L+AC + G + LG 
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGF 540



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 230/473 (48%), Gaps = 14/473 (2%)

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
           K+D    N+ + +  K   L  A   F ++ +R   SWT +IS Y  S    +AL  F K
Sbjct: 46  KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105

Query: 288 ML---EVKEEPNLITLITVLGSCA-GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
           M    E++ +P L++L   L +C  GL +L  G ++H   ++ G+     ++G AL++ Y
Sbjct: 106 MRLQSELRIDPFLLSL--GLKTCGLGLNYLY-GTNLHGFSVKTGLVNSV-FVGSALLDMY 161

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            + G++    KV   +  RN ++W  +I+   R G S+  L     M    +  DS++ A
Sbjct: 162 MKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
            +L A  + G+L  G  IH   +K    ++ FV +SL  MY+KCG  +     F +++  
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL 281

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            VV W +++  + Q G     +  F +M  + +  +E TF   I  C+N  +L+ G+ +H
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             ++  G    + +  ++  +Y+KCG+L +  +VF SM  R++++WS +I  Y   G   
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
           +A     +M   G KPNE    ++L  C     +E+GK     +   G+E      + ++
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALI 461

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRIDVMKTIEK 691
            + ++ G I  A K+     +  +   W A+++G   H    + I++ + I+K
Sbjct: 462 IMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQK 513



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 2/345 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   L  G   +   +  L   Y + G L      F   +  D   W  ++  Y+    
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +  +  + +M       + + + +V+  C++   L  GE++H  ++  GF     +  S
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANS 358

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           I+  Y + G L    KVF  M  RD+++WS+IIA+Y       E  +    M  EG +P+
Sbjct: 359 IMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPN 418

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S+   CG +  L   + +H HVL   ++    + ++ I+MY+KCG +  A + F+
Sbjct: 419 EFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFM 478

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
              K    SWTAMIS Y   G  Q+A+E F  + +V   P+ +T I VL +C+  G +  
Sbjct: 479 DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL 538

Query: 316 GKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           G      + +   + P  ++ G  +I+     G++ + E +I ++
Sbjct: 539 GFYYFNSMSKDYHITPSKEHYG-CMIDLLCRAGRLHDAETLIRSM 582



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C N  +L    +LHAH+L  G       +  ++  Y++ G L S   VF + K  D   W
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           + +I  Y    + EE+     +M  E    + F   SVL  C S+  L  G+++H  ++ 
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G ++  ++ ++++  Y + G + +A K+F      D++SW+++I+ Y ++    E +++
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIEL 507

Query: 184 FHSMVREGVEPDFVTMLSLAEAC 206
           F ++ + G+ PD VT + +  AC
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTAC 530


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 180/601 (29%), Positives = 326/601 (54%), Gaps = 8/601 (1%)

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG---VEPDFVTMLSL 202
           L DAR +FD++  RD VSW++II+ Y +++D SE L++F  M  +    ++P F+  L L
Sbjct: 65  LKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDP-FLLSLGL 123

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            + CG   +     ++HG  ++  +     +G++ + MY K G++  + + F ++  R  
Sbjct: 124 -KTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +WTA+I+   R+G+ +  L  F  M   K E +       L + A  G L  G+S+H Q
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQ 242

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            ++KG   E  ++  +L   Y +CGK+         +   +++SW  +++ Y + G    
Sbjct: 243 TLKKGF-DENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLID 441
            L+   +M+   ++P+ ++ ++ +S C N   L+ G Q+H HV+ +   +   V +S++ 
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT 361

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +YSKCG       +F  ++ + ++ W+++I  + Q G   EA     +M     + +E  
Sbjct: 362 LYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFA 421

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             + +  C ++  LE+GK +H  ++S G+ +   + +AL  MYAKCG +  A ++F    
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           + +++SW+AMI  Y  HG   +A  LF+ +   G++P+ VTF+ +L ACSH+G V+ G +
Sbjct: 482 KDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFY 541

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           YFN+M + + + P  +HY CM+DLL R+G +  A  +I SMP   +  +W  LL  CRIH
Sbjct: 542 YFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIH 601

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
             +D  +    E+     N  G +  L+NI+A +G W E   +R +M+  G+ K PG+S+
Sbjct: 602 GDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSS 661

Query: 741 I 741
           +
Sbjct: 662 V 662



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 287/578 (49%), Gaps = 21/578 (3%)

Query: 45  LRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLR 103
           L+ +R +FD   + D   W  +I  Y+ ++   E++ L+ KM ++ +  I  F+    L+
Sbjct: 65  LKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLK 124

Query: 104 ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
            C    +   G  +HG  +K G      + +++L  Y + G +  + KVFD+M +R+ V+
Sbjct: 125 TCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVT 184

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+++I           GL  F  M R  VE D        +A  +  +L   RSIH   L
Sbjct: 185 WTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTL 244

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           ++    +  + NS   MY+KCG L     TF K+      SWT +++ Y + G     L+
Sbjct: 245 KKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQ 304

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
           +F +M      PN  T   V+  CA    L+ G+ +H  ++  G       +  +++  Y
Sbjct: 305 AFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS-VANSIMTLY 363

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
           ++CG+++   KV  ++  R+I++W+ +I+ Y++ G  +EA E L +M++ G  P+ F++A
Sbjct: 364 SKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALA 423

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           S LS CG++  L+ G Q+H HV+ +  +    V S+LI MY+KCG    A  +F    + 
Sbjct: 424 SVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKD 483

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            ++ W +MI G+ ++G+S EAI LF  +    L  D VTF+  + ACS+ G ++ G +  
Sbjct: 484 DIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYF 543

Query: 523 HKLISYGVRKDIYIDTA------LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCY 575
           + +      KD +I  +      + D+  + G L  A+ +  SM  + + V WS ++   
Sbjct: 544 NSM-----SKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRAC 598

Query: 576 GMHGQLN----DAASLFKQMLDSGIKPNEVTFMNILWA 609
            +HG ++     AA + K  LD       +T  NI  A
Sbjct: 599 RIHGDVDCGQRAAAEVLK--LDPNCAGTHITLANIFAA 634



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 199/406 (49%), Gaps = 1/406 (0%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           T LH   +  GL       + L++ Y ++G +  S  VFD     ++  W  +I   +  
Sbjct: 136 TNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA 195

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            + E  +  +  M R +    ++ Y   L+A +  G L  G  +H + +K GFD++  + 
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            S+   Y + G LD     F KM + DVVSW++I+ +Y        GL+ F  M    V 
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T  ++   C     L+    +H HVL         + NS + +YSKCG+L S  + 
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  ++ R   +W+ +I+ Y++ G+ ++A E   +M     +PN   L +VL  C  +  L
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +GK +H  ++  G+  +   +  ALI  YA+CG ++E  K+     + +I+SW  +IS 
Sbjct: 436 EQGKQLHAHVLSVGL-EQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           YA  G S+EA+EL   +Q  GL PDS +    L+AC + G + LG 
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGF 540



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 230/473 (48%), Gaps = 14/473 (2%)

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
           K+D    N+ + +  K   L  A   F ++ +R   SWT +IS Y  S    +AL  F K
Sbjct: 46  KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105

Query: 288 ML---EVKEEPNLITLITVLGSCA-GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
           M    E++ +P L++L   L +C  GL +L  G ++H   ++ G+     ++G AL++ Y
Sbjct: 106 MRLQSELRIDPFLLSL--GLKTCGLGLNYLY-GTNLHGFSVKXGLVNSV-FVGSALLDMY 161

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            + G++    KV   +  RN ++W  +I+   R G S+  L     M    +  DS++ A
Sbjct: 162 MKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
            +L A  + G+L  G  IH   +K    ++ FV +SL  MY+KCG  +     F +++  
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL 281

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            VV W +++  + Q G     +  F +M  + +  +E TF   I  C+N  +L+ G+ +H
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             ++  G    + +  ++  +Y+KCG+L +  +VF SM  R++++WS +I  Y   G   
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
           +A     +M   G KPNE    ++L  C     +E+GK     +   G+E      + ++
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALI 461

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRIDVMKTIEK 691
            + ++ G I  A K+     +  +   W A+++G   H    + I++ + I+K
Sbjct: 462 IMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQK 513



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 2/345 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   L  G   +   +  L   Y + G L      F   +  D   W  ++  Y+    
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +  +  + +M       + + + +V+  C++   L  GE++H  ++  GF     +  S
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANS 358

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           I+  Y + G L    KVF  M  RD+++WS+IIA+Y       E  +    M  EG +P+
Sbjct: 359 IMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPN 418

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              + S+   CG +  L   + +H HVL   ++    + ++ I+MY+KCG +  A + F+
Sbjct: 419 EFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFM 478

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
              K    SWTAMIS Y   G  Q+A+E F  + +V   P+ +T I VL +C+  G +  
Sbjct: 479 DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL 538

Query: 316 GKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           G      + +   + P  ++ G  +I+     G++ + E +I ++
Sbjct: 539 GFYYFNSMSKDYHITPSKEHYG-CMIDLLCRAGRLHDAETLIRSM 582



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C N  +L    +LHAH+L  G       +  ++  Y++ G L S   VF + K  D   W
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
           + +I  Y    + EE+     +M  E    + F   SVL  C S+  L  G+++H  ++ 
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G ++  ++ ++++  Y + G + +A K+F      D++SW+++I+ Y ++    E +++
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIEL 507

Query: 184 FHSMVREGVEPDFVTMLSLAEAC 206
           F ++ + G+ PD VT + +  AC
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTAC 530


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 184/594 (30%), Positives = 318/594 (53%), Gaps = 4/594 (0%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           AR++F+ M SR+ VSW+ +I  Y  N    E   ++  M R GV+PD +T  +L     +
Sbjct: 96  ARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDD 155

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
             +L+    IH H++R        + NS +  Y K   L  A + F ++  + + S+  M
Sbjct: 156 TTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVM 215

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I+ Y + G+ ++AL+ F++M  +  +P+  T   +LG   G   +  G+ +H   I+   
Sbjct: 216 ITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSY 275

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             +  ++  AL++FY++   +   + +   + E + +S+N++I+ YA  G  +++ +L  
Sbjct: 276 VWDI-FVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFK 334

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCG 447
           ++Q       +F  A+ LS      +L +G Q H   +      E  V ++L+DMY+KC 
Sbjct: 335 RLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCE 394

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  +F  +  ++ V W ++I  + Q G   EA+ +F +M    +  D+ TF + ++
Sbjct: 395 KFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLK 454

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           A +N+  +  GK +H  +I  G+   ++  + L DMYA CG ++ A  VF  M +RN+V 
Sbjct: 455 ASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVC 514

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+A+I  Y  +G      S F  M++SG+ P+ V+F+++L ACSH G VE+  +YFN+M 
Sbjct: 515 WNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMT 574

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           +++ ++P  +HYA M+D+L RSG    A  +I  MPF  +  +W ++LN CRIHK  D+ 
Sbjct: 575 QVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLA 634

Query: 687 KTIEKEL-SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           K    +L  +    D   Y  +SNIYAE G W+   KV+  M   G+KKV  YS
Sbjct: 635 KKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYS 688



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/606 (24%), Positives = 283/606 (46%), Gaps = 14/606 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++  Y +  +L  +R +F++    +   W ++I  Y  NN  +E+  LY +M R      
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           +  + ++L        L    ++H  II+ GF    ++  S++ +Y +  CLD A ++F 
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCS 211
           +M ++D VS++ +I  Y       E LK+F  M     +P    F  ML ++    ++  
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
               + IHG  ++     D  + N+ +  YSK   +  A+  F ++ +    S+  +I+ 
Sbjct: 263 ---GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG 319

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y  +G ++K+ + F ++     +       T+L   A    L  G+  H Q +      E
Sbjct: 320 YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G AL++ YA+C K  +  ++   +  RN + W  +IS Y +KG  +EAL++  +M 
Sbjct: 380 VQ-VGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKN 450
              +  D  + AS+L A  N+ S+ LG Q+H  VI++      F  S L+DMY+ CG   
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMK 498

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F+ +  +++V WN++I  + QNG++    + F  M  + L  D V+FL+ + ACS
Sbjct: 499 DAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACS 558

Query: 511 NIGQLEKGKWVHHKLISY---GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           + G +EK  W  + +        R+  Y    + D+  + G    A+ +   M  E + V
Sbjct: 559 HRGLVEKALWYFNSMTQVYKLDPRRKHY--ATMIDVLCRSGRFNEAENLISEMPFEPDEV 616

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
            WS++++   +H   + A     Q+       +   ++N+    + +G  E       AM
Sbjct: 617 MWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAM 676

Query: 627 RIFGVE 632
           R  GV+
Sbjct: 677 RERGVK 682



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 256/572 (44%), Gaps = 43/572 (7%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F   T L+++ ++H+H++  G          L++SY +   L  +  +F      DS  +
Sbjct: 153 FDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSF 212

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
            V+I  Y    F EE++ L+ +M       S F + ++L       D+  G+++HG  IK
Sbjct: 213 NVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIK 272

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             +  D  +  ++L  Y +   +D A+ +FD+M   D VS++ II  Y  N    +   +
Sbjct: 273 TSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDL 332

Query: 184 FHSMVREGVEPD-----FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           F  +  +G   D     F TMLS+A    EL +L   R  H   +      +  +GN+ +
Sbjct: 333 FKRL--QGTSFDRKNFPFATMLSVAAI--EL-NLSMGRQTHAQAVVTTAVSEVQVGNALV 387

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KC     A R F  +  R +  WTA+IS Y + G+ ++AL+ F +M       +  
Sbjct: 388 DMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQA 447

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  + L + A L  +  GK +H  +IR G+     + G  L++ YA CG M +  +V   
Sbjct: 448 TFASTLKASANLASVSLGKQLHSSVIRLGLLSSV-FSGSVLVDMYANCGSMKDAIEVFKE 506

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + +RNI+ WN LIS Y++ G ++        M   GL PDS S  S L+AC + G ++  
Sbjct: 507 MPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKA 566

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           L     + ++                        Y L  R +      + +MI    ++G
Sbjct: 567 LWYFNSMTQV------------------------YKLDPRRKH-----YATMIDVLCRSG 597

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA NL  +M     E DEV + + + +C      +  K    +L      +D     
Sbjct: 598 RFNEAENLISEM---PFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYV 654

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            ++++YA+ G  + A +V  +M ER V   +A
Sbjct: 655 NMSNIYAEAGKWENAAKVKKAMRERGVKKVTA 686



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 212/443 (47%), Gaps = 3/443 (0%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N  +  Y K  +L  A   F  +  R   SWT MI  Y+++   ++A   + +M     +
Sbjct: 81  NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ IT  T+L        L+E   +H  IIR G          +L++ Y +   +    +
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFN-SLVDSYCKTCCLDIASQ 199

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   +  ++ +S+N++I+ Y + G  +EAL+L +QM+     P  F+ A+ L        
Sbjct: 200 LFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSED 259

Query: 415 LQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           +  G QIHG  IK     D FV ++L+D YSK  + +LA  LF+ + +   V +N +I G
Sbjct: 260 VIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG 319

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           +  NG   ++ +LF ++     +     F T +   +    L  G+  H + +      +
Sbjct: 320 YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + +  AL DMYAKC   + A R+F +++ RN V W+A+I  Y   G   +A  +FK+M  
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNR 439

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
             +  ++ TF + L A ++  SV  GK   +++   G+   +   + +VD+ +  G ++ 
Sbjct: 440 ENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKD 499

Query: 654 AFKMIHSMPFPANGSIWGALLNG 676
           A ++   MP   N   W AL++ 
Sbjct: 500 AIEVFKEMP-DRNIVCWNALISA 521


>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
 gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
          Length = 673

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 182/551 (33%), Positives = 297/551 (53%), Gaps = 11/551 (1%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK- 259
           SL   C    SL   RSIH H+LR     +  L NS + MY KC  L  A   F  + + 
Sbjct: 15  SLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVARE 74

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           R    W  +I+   + G  ++++  + +M     +PN ITL++VLG+CA L  L+ G+ +
Sbjct: 75  RIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREI 134

Query: 320 HCQIIRKGMGPEYDYLGP-------ALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           H   +  G    Y+   P       AL+  Y  CG +++   V   I  R++ +WN +++
Sbjct: 135 HRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVA 194

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            Y+R G   +A+ +L +M   G+ P   +    LS C  VG+L     IH H++    + 
Sbjct: 195 AYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATGLES 254

Query: 433 E-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
              V ++L+ MY +CG    A   F+RI+ K +V WN+MI  + Q+G+S ++I ++H M 
Sbjct: 255 RPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMD 314

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L  + +D+VT +  + ACS++    K + VH +++  GV  D+ + TAL + YA+ G L 
Sbjct: 315 LEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLV 374

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A  VF  M ERNV +WSAM+  Y   G  + +  ++++M   G++PN +T+++IL+AC+
Sbjct: 375 DADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFACN 434

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H+G ++ G  YF +M R +G+E   +H +C+VDLL RSG ++ A  ++ S+P+    S W
Sbjct: 435 HAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASVPYRLGISAW 494

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL  CR H  ++    + +      + +   Y  LSN+YA  G WDE  +VR +M  T
Sbjct: 495 MCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALSNMYAGHGMWDEVSRVRQLMANT 554

Query: 731 GLKKVPGYSTI 741
            L K  G S +
Sbjct: 555 -LDKSTGKSFV 564



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 218/430 (50%), Gaps = 15/430 (3%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKEP 58
           L R C N   L     +HAH+L  G   +      L+E Y +  SLR +  VF+   +E 
Sbjct: 16  LIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVARER 75

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
            +F W +LI          ESI LY +M  E    +     SVL AC++L DL +G ++H
Sbjct: 76  IAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREIH 135

Query: 119 GRIIKCGFDK--------DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
              +  G  +        D V+ T+++  YG  G + DAR VF+ +  RD+ +W++++A+
Sbjct: 136 RSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVAA 195

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           Y  N  +++ + +   M  EGV P   T + +   C  + +L  ARSIH H+L   ++  
Sbjct: 196 YSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATGLESR 255

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             +G + + MY +CG L  A   F +I  +   +W AMI+ Y +SG  + ++  +  M  
Sbjct: 256 PTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMDL 315

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKM 349
                + +TLI VL +C+ L    + + VH +I+  G+  E D  LG AL+  YA  G +
Sbjct: 316 EGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGV--ELDVVLGTALVNAYARGGHL 373

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
            + + V   + ERN+ +W+ +++ YA+ G    +LE+  +MQ  GL P+  +  S L AC
Sbjct: 374 VDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFAC 433

Query: 410 GNVGSLQLGL 419
            + G L  GL
Sbjct: 434 NHAGLLDHGL 443



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 262/536 (48%), Gaps = 17/536 (3%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M   +  I+  +Y S++R C++   L +G  +H  I++ G+  +  +  S++  Y +   
Sbjct: 1   MDHSRLPITVPLYESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDS 60

Query: 146 LDDARKVFDKMTSRDVVS--WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           L DA  VF+ + +R+ ++  W+ +IA+        E + ++  M  EGV+P+ +T++S+ 
Sbjct: 61  LRDATAVFE-LVARERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVL 119

Query: 204 EACGELCSLRPARSIH-GHVL-------RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            AC  L  L+  R IH  HVL        R + +D  +  + + MY +CG +  A   F 
Sbjct: 120 GACANLEDLKTGREIHRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFE 179

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I  R   +W AM++ Y+R+G   +A+    +M      P   T + +L  C  +G L E
Sbjct: 180 GICGRDLAAWNAMVAAYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDE 239

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
            +S+H  I+  G+      +G  L+  Y  CG +         I +++I++WN +I+ YA
Sbjct: 240 ARSIHAHILATGL-ESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYA 298

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEF 434
           + G S++++ +   M   G+  D  ++   L AC ++        +H  ++    + D  
Sbjct: 299 QSGHSRDSIRIYHVMDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVV 358

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++L++ Y++ G    A L+F  +++++V  W++M+  + Q G+   ++ ++ +M L  
Sbjct: 359 LGTALVNAYARGGHLVDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQG 418

Query: 495 LEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
           L  + +T+++ + AC++ G L+ G  +       YG+       + + D+  + G L  A
Sbjct: 419 LRPNYITYVSILFACNHAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEA 478

Query: 554 QRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQ--MLDSGIKPNEVTFMNI 606
           + +  S+  R  + +W  ++     HG +   A + ++   ++SG     V   N+
Sbjct: 479 EALMASVPYRLGISAWMCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALSNM 534



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 168/345 (48%), Gaps = 1/345 (0%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D   +T L+  Y   GS+  +R VF+     D   W  ++  Y  N    +++L+  +M 
Sbjct: 154 DAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVAAYSRNGQMAQAVLVLRRMA 213

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
            E        +  +L  C ++G L     +H  I+  G +    + T+++  YG  G L 
Sbjct: 214 VEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATGLESRPTVGTTLVSMYGRCGSLG 273

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
            A   F ++  +D+V+W+++IA+Y  +    + ++++H M  EGV  D VT++ + +AC 
Sbjct: 274 GAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMDLEGVRVDKVTLIGVLDACS 333

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            L      R +H  ++   +++D  LG + +  Y++ G L+ A+  F ++E+R   +W+A
Sbjct: 334 SLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLVDADLVFAEMEERNVATWSA 393

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           M++ Y ++G   ++LE + +M      PN IT +++L +C   G L  G      + R  
Sbjct: 394 MVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFACNHAGLLDHGLDYFASMGRDY 453

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLI 371
                +     +++     G++ E E ++ ++  R  I +W  L+
Sbjct: 454 GIESCEEHCSCIVDLLGRSGRLDEAEALMASVPYRLGISAWMCLL 498



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 5/174 (2%)

Query: 14  TRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           TRL HA ++ TG+  D    T L+ +YA  G L  + LVF   +E +   W+ ++  Y  
Sbjct: 341 TRLVHARIVDTGVELDVVLGTALVNAYARGGHLVDADLVFAEMEERNVATWSAMVAAYAQ 400

Query: 73  NNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDD 130
               + S+ +Y +M + Q    N+I Y S+L AC+  G L  G      + +  G +  +
Sbjct: 401 TGHPDRSLEMYREM-QLQGLRPNYITYVSILFACNHAGLLDHGLDYFASMGRDYGIESCE 459

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKM 183
              + I+   G  G LD+A  +   +  R  + +W  ++ +   + DV  G ++
Sbjct: 460 EHCSCIVDLLGRSGRLDEAEALMASVPYRLGISAWMCLLGACRTHGDVERGARV 513


>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
 gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
          Length = 604

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 318/607 (52%), Gaps = 60/607 (9%)

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           +D++SW+S++ +Y  +    E L++F  M    VEPD +T  S+  AC  +  L   + +
Sbjct: 2   KDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAMELLELGKEV 58

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER-------------------------- 252
           H  V R + K D  L  + I MYSKCG L SA R                          
Sbjct: 59  HARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRA 118

Query: 253 -----------------------TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
                                   F ++EK+  T+W AMIS Y + G   K+L  F +M 
Sbjct: 119 REALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMS 178

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
               +P+  T ++V+G+C+ L  L +G++V  Q    G+    +    AL+  YA+CG +
Sbjct: 179 LEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGI----EEGRTALLSLYAKCGNL 234

Query: 350 SECEKVIHAIGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
                +   +  R N++SWN +I+ YA+ G  +EALEL   M+  G+ PD  + A +L A
Sbjct: 235 EAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGA 294

Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C + G    G++IH  + +   + D F+ +++++MY+KCG    A   FE++++K+ V W
Sbjct: 295 CTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTW 354

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           ++M+  F Q+G   EA++L+ +M     +  E+T   A+ ACS IG L++GK +H ++ +
Sbjct: 355 SAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQA 414

Query: 528 YGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
               ++ +++  +L +MYAKCG L  A  +F ++  R+  SW+ +I  +  HG +++  S
Sbjct: 415 TETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLS 474

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLL 645
           L  +M+  G+ P+ VTF  +L ACSH+G ++ G+ +F +M + FGV  D +HY CMVDLL
Sbjct: 475 LHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVDLL 534

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
           SR+G +E A +++HSMP+      W  LL    +   +D      +  +      +  Y 
Sbjct: 535 SRAGRVESAEELVHSMPYEPPAMGWTTLLGSSEVQADLDRGSRYAEVAAGLEPGSSSSYV 594

Query: 706 LLSNIYA 712
           LL NIY+
Sbjct: 595 LLWNIYS 601



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 161/608 (26%), Positives = 302/608 (49%), Gaps = 67/608 (11%)

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D   W  ++  Y  +   EE + L+ KM  E  +I+   Y S+L ACS++  L  G++
Sbjct: 1   DKDLISWNSMVVAYSQHGHGEEMLELFRKMDVEPDSIT---YASILGACSAMELLELGKE 57

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV------------------------ 152
           VH R+ +  F  D  +  +++  Y + G L+ AR+V                        
Sbjct: 58  VHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGR 117

Query: 153 -------------------------FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
                                    FD+M  + V +W+++I+SY  +   S+ L +FH M
Sbjct: 118 AREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQM 177

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             EGV+PD  T +S+  AC  L +L   R++        I+ +G    + + +Y+KCG+L
Sbjct: 178 SLEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIE-EGR--TALLSLYAKCGNL 234

Query: 248 LSAERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
            +A   F K++ ++   SW +MI+ Y +SG  ++ALE +  M E   +P+ IT    LG+
Sbjct: 235 EAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGA 294

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C   G   +G  +H +I    +  +  +L  A++  YA+CG++         +  +N ++
Sbjct: 295 CTSYGGSAKGVEIHSRITESKIRTDV-FLDTAIVNMYAKCGELETAMSYFEKMRRKNAVT 353

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W+ ++  + + G  +EAL+L ++M + G  P   ++A +L+AC  +G+LQ G  IH  + 
Sbjct: 354 WSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQ 413

Query: 427 KIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
             +      F+Q+SL++MY+KCG   +A  +F  +Q++    WN++I G   +G+  E +
Sbjct: 414 ATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVL 473

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL---ISYGVRKDIYIDTALT 541
           +L  +M  + ++ D VTF   + ACS+ G L++G+   H L   + +GV  D      + 
Sbjct: 474 SLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGR--SHFLSMEMEFGVAHDTEHYLCMV 531

Query: 542 DMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
           D+ ++ G +++A+ +  SM  E   + W+ ++    +   L D  S + ++  +G++P  
Sbjct: 532 DLLSRAGRVESAEELVHSMPYEPPAMGWTTLLGSSEVQADL-DRGSRYAEVA-AGLEPGS 589

Query: 601 VTFMNILW 608
            +   +LW
Sbjct: 590 SSSYVLLW 597



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 195/374 (52%), Gaps = 4/374 (1%)

Query: 46  RSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC 105
           ++SR  FD  ++     W  +I  Y  +    +S+LL+H+M  E        + SV+ AC
Sbjct: 137 KASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMSLEGVKPDARTFVSVIGAC 196

Query: 106 SSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSW 164
           SSL  L  G  V  +    G ++    +T++L  Y + G L+ AR +FDK+  R +VVSW
Sbjct: 197 SSLQALEKGRAVEEQATSMGIEEG---RTALLSLYAKCGNLEAARDIFDKLKYRKNVVSW 253

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
           +S+IA+Y  +    E L+++  M  EGV+PD +T      AC           IH  +  
Sbjct: 254 NSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITE 313

Query: 225 RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
            KI+ D  L  + + MY+KCG+L +A   F K+ ++   +W+AM+  + + G+ ++AL+ 
Sbjct: 314 SKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDL 373

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           +++M+    +P+ ITL   L +C+ +G L+EGK++H +I          +L  +L+  YA
Sbjct: 374 YLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYA 433

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG ++    +   +  R+  SWN +I  +A  G   E L L  +M   G+ PD  + A 
Sbjct: 434 KCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFAC 493

Query: 405 SLSACGNVGSLQLG 418
            L AC + G L  G
Sbjct: 494 VLLACSHAGLLDRG 507



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 1/207 (0%)

Query: 12  KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           K   +H+ +  + +  D    T ++  YA+ G L ++   F+  +  ++  W+ ++  ++
Sbjct: 303 KGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFI 362

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            + +  E++ LY +M+ E    S       L ACS +G L  G+ +H RI      ++ +
Sbjct: 363 QHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCL 422

Query: 132 -IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            +Q S+L  Y + GCL  A  +F  +  RD  SW++II  +  + DV E L +   MV++
Sbjct: 423 FLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQD 482

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARS 217
           GV+PD+VT   +  AC     L   RS
Sbjct: 483 GVDPDYVTFACVLLACSHAGLLDRGRS 509


>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
 gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
          Length = 849

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 205/685 (29%), Positives = 342/685 (49%), Gaps = 19/685 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + +  +C +L +   +H  ++   L  D      L++  A+   L  +   F      D 
Sbjct: 133 ISILNACESLAQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDV 192

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  Y  N    E+   Y +M+ E    +N  + +VL ACSS  D    E V+G 
Sbjct: 193 ISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARD---AELVYGN 249

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++  ++ D ++  + +  + + GCLD AR VF +M   DV SW++++A+   +   SE 
Sbjct: 250 VVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEA 309

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++F  M  E V  D  T++     C    SL   +SIH  V R  ++ D   G + + M
Sbjct: 310 LELFRRMPSE-VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTM 368

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKMLEVKEEPNLIT 299
           YS+CGDL  A R F  I  +   SW  MI+ Y R      +ALE F  ML     P   T
Sbjct: 369 YSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTT 428

Query: 300 LITVLGS--CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            + V+ +  C  +G     K +H  I+  G+  +  ++G AL+  Y   G + +  +V  
Sbjct: 429 ALNVVSAVECQSVG-----KQLHGWIVDTGLYSD-SFIGSALVNMYERTGSLGDARRVFE 482

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            I ER++ +WN ++      G  +EALE   +M   G   +  +   +LSA  +   +  
Sbjct: 483 KIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAV-SPDRVCY 541

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G ++HG + +   + D  V ++LI MY++C     A   F+R++ KS+V W S+I     
Sbjct: 542 GRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVD 601

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            G+  EAI+LF +M L   E D VTF T ++AC+ +    +GK VH +    G+  ++++
Sbjct: 602 LGSCQEAIDLFQRMEL---EPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFV 658

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            TAL  M++K G+L  A+R+F+++    +  W+AM+  Y   G        F  M   G+
Sbjct: 659 ATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGV 718

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAF 655
            P+ +TF+ ++ ACSH+G VE+G   F +M   +GV   L+ Y C++DLL+R+G +E A+
Sbjct: 719 APDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAY 778

Query: 656 KMIHSMPFPANGSIWGALLNGCRIH 680
             +  MP   +   W  LL  C+I 
Sbjct: 779 DFLQGMPCGPSDVTWKTLLAACKIQ 803



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 190/673 (28%), Positives = 344/673 (51%), Gaps = 26/673 (3%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L + T +++ +   G+  D      ++  + +  S+  +  VF+   +    +W  ++  
Sbjct: 44  LHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTA 103

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           ++ +   + + L + +M  E        + S+L AC S   L  GE VH  II    + D
Sbjct: 104 FVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACES---LAQGELVHRLIIDKNLESD 160

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
            VI  +++    +   LD A + F +M  RDV+SW+ ++ +Y  N  ++E    +  M+ 
Sbjct: 161 VVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLL 220

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           EGV P+ +T L++  AC    S R A  ++G+V+  + + D  + N+ I M+SKCG L  
Sbjct: 221 EGVVPNNITFLAVLAACS---SARDAELVYGNVVEAEWESDTMVANASINMFSKCGCLDR 277

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCA 308
           A   F ++++    SW AM++   + G+  +ALE F +M  EV  +    TL+  L +CA
Sbjct: 278 ARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKT--TLVIALSTCA 335

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSW 367
               L +GKS+H ++ R  +G E D + G AL+  Y+ CG + E  +V   I  +N++SW
Sbjct: 336 APESLEDGKSIHSRVAR--LGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSW 393

Query: 368 NMLISEYAR-KGMSKEALELLVQMQTWGLMPDSFSVASSLSA--CGNVGSLQLGLQIHGH 424
           N +I+ Y R + +   ALE+   M   G+ P   +  + +SA  C +VG      Q+HG 
Sbjct: 394 NNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGK-----QLHGW 448

Query: 425 VIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           ++      D F+ S+L++MY + G    A  +FE+I ++ V  WN+++     +G   EA
Sbjct: 449 IVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREA 508

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +  F +M L     +  TFL A+ A S   ++  G+ +H  +   G+  D  +  AL  M
Sbjct: 509 LEWFSRMLLEGASGNRATFLLALSAVSP-DRVCYGRRLHGLIAESGLEADNNVANALISM 567

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YA+C  L+ A+  FD + ++++VSW+++I      G   +A  LF++M    ++P+ VTF
Sbjct: 568 YARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTF 624

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
             +L AC+   +  EGK   +  R  G+E ++     ++ + S+ G++  A ++  ++  
Sbjct: 625 TTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEA 684

Query: 664 PANGSIWGALLNG 676
           P   + W A+L G
Sbjct: 685 P-TLACWNAMLGG 696



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 174/624 (27%), Positives = 306/624 (49%), Gaps = 25/624 (4%)

Query: 79  SILLYHKMIREQATISN--FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
           ++ L+ +    Q ++S+    +  ++  C+    L     V+  I   G   D     S+
Sbjct: 10  TLQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASV 69

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  + +   + DA +VF++M  R +V W+S++ ++ D+ DV      F  M  EGV PD 
Sbjct: 70  VRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDR 129

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           VT +S+  AC    SL     +H  ++ + ++ D  +GN+ + M +KC DL  A R F +
Sbjct: 130 VTFISILNACE---SLAQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQR 186

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           + +R   SWT M++ Y R+G   +A   +++ML     PN IT + VL +C+     R+ 
Sbjct: 187 MPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSS---ARDA 243

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           + V+  ++      +   +  A I  +++CG +     V H +   ++ SWN +++  A+
Sbjct: 244 ELVYGNVVEAEWESD-TMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQ 302

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ 436
            G S EALEL  +M +  +  D  ++  +LS C    SL+ G  IH  V ++  + + V 
Sbjct: 303 HGFSSEALELFRRMPS-EVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVA 361

Query: 437 -SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL--EAINLFHQMYLN 493
            ++L+ MYS+CG    A  +F+ I  K+VV WN+MI   Y    SL   A+ +F  M L+
Sbjct: 362 GTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAA-YGRDESLHSRALEIFRLMLLD 420

Query: 494 CLEMDEVTFLTAIQA--CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            +     T L  + A  C ++     GK +H  ++  G+  D +I +AL +MY + G L 
Sbjct: 421 GVRPTRTTALNVVSAVECQSV-----GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLG 475

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+RVF+ + ER+V +W+A++     HGQ  +A   F +ML  G   N  TF+  L A S
Sbjct: 476 DARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVS 535

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKMIHSMPFPANGS 668
               V  G+     +   G+E D      ++ + +R   +E A   F  +      +  S
Sbjct: 536 -PDRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTS 594

Query: 669 IWGALLNGCRIHKRIDVMKTIEKE 692
           +  A ++     + ID+ + +E E
Sbjct: 595 VIAACVDLGSCQEAIDLFQRMELE 618



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 11/272 (4%)

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D F  +S++ M+ KC   + A  +FE++  +S+V+W SM+  F  + +   A   F +M 
Sbjct: 62  DGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQ 121

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L  +  D VTF++ + AC ++ Q   G+ VH  +I   +  D+ I  AL  M AKC DL 
Sbjct: 122 LEGVLPDRVTFISILNACESLAQ---GELVHRLIIDKNLESDVVIGNALMKMLAKCYDLD 178

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A R F  M  R+V+SW+ M+  Y  +G + +A   + +ML  G+ PN +TF+ +L ACS
Sbjct: 179 GAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACS 238

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
              S  + +  +  +     E D       +++ S+ G ++ A  + H M      S W 
Sbjct: 239 ---SARDAELVYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKS-WN 294

Query: 672 ALLNGCRIH----KRIDVMKTIEKELSVTGTN 699
           A++     H    + +++ + +  E++V  T 
Sbjct: 295 AMVAALAQHGFSSEALELFRRMPSEVAVDKTT 326


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 190/564 (33%), Positives = 306/564 (54%), Gaps = 40/564 (7%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVM--YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           + +H H+LR  +  D P           S    L  A + F +I +    +W  +I  + 
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFA 106

Query: 274 RSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            S    + L  F++ML E +  PN  T   V+ +   +  L  G+++H  +++   G + 
Sbjct: 107 SSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDL 166

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            ++  +LI FY+  G +     V   I E++I+SWN +IS + + G  +EAL+L  +M+ 
Sbjct: 167 -FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKM 225

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKN 450
               P+  ++   LSAC     L+ G     ++ +  ID  +  + ++++DMY KCG   
Sbjct: 226 ENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI-NLILSNAMLDMYVKCGSLE 284

Query: 451 LAYLLFERIQQKSVVMWNSMICGF-------------------------------YQNGN 479
            A  LF+++++K +V W +MI G+                                QNG 
Sbjct: 285 DARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGK 344

Query: 480 SLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
             EA+ +F ++ LN   + +EVT  + + AC+ +G ++ G W+H  +   G++ + +I T
Sbjct: 345 PKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITT 404

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           +L DMY+KCG L+ A  VF S+  R+V  WSAMI    MHG    A  LF +M ++ +KP
Sbjct: 405 SLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKP 464

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           N VTF N+L ACSHSG V+EG+ +FN MR ++GV P  +HYACMVD+L R+G +E A ++
Sbjct: 465 NAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVEL 524

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MP   + S+WGALL  CRI+  +++ +     L  T +N++G Y LLSNIYA+ G W
Sbjct: 525 IEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKW 584

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           D   ++R  M+V+GL+K PG S+I
Sbjct: 585 DCVSRLRQHMKVSGLEKEPGCSSI 608



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 231/451 (51%), Gaps = 36/451 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYA--EMGSLRSSRLVFDTFKEPDS 60
           L   C N + L +LHAH+L TGL +DPP++T+L  + A     SL  +  VFD    P+ 
Sbjct: 36  LIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNL 95

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
           + W  LI+ +  +    + +L++ +M+ E     N + +P V++A + +  L +G+ +HG
Sbjct: 96  YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHG 155

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            ++K  F  D  I  S++  Y   G LD A  VF K+  +D+VSW+S+I+ +       E
Sbjct: 156 MVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEE 215

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M  E   P+ VTM+ +  AC +   L   R    ++ R  I I+  L N+ + 
Sbjct: 216 ALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLD 275

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWT-------------------------------AM 268
           MY KCG L  A R F K+E++   SWT                               A+
Sbjct: 276 MYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNAL 335

Query: 269 ISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           IS Y ++G  ++AL  F ++ L    +PN +TL + L +CA LG +  G  +H  I ++G
Sbjct: 336 ISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQG 395

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +   + ++  +LI+ Y++CG + +  +V +++  R++  W+ +I+  A  G  + A++L 
Sbjct: 396 IKLNF-HITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLF 454

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
            +MQ   + P++ +  + L AC + G +  G
Sbjct: 455 SKMQETKVKPNAVTFTNLLCACSHSGLVDEG 485



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 220/455 (48%), Gaps = 55/455 (12%)

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           +++ N  T+  ++  CA    L   K +H  ++R G+     +  P+  + +  C   S 
Sbjct: 25  EQKSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLF----FDPPSATKLFTACALSSP 77

Query: 352 CE-----KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASS 405
                  KV   I   N+ +WN LI  +A      + L + +QM       P+S++    
Sbjct: 78  SSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFV 137

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           + A   V SL  G  IHG V+K     D F+ +SLI  YS  G  + AYL+F +I +K +
Sbjct: 138 IKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDI 197

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V WNSMI GF Q G+  EA+ LF +M +     + VT +  + AC+    LE G+W    
Sbjct: 198 VSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDY 257

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG-------- 576
           +   G+  ++ +  A+ DMY KCG L+ A+R+FD M E+++VSW+ MID Y         
Sbjct: 258 IERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAA 317

Query: 577 -----------------------MHGQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSH 612
                                   +G+  +A ++F+++ L+   KPNEVT  + L AC+ 
Sbjct: 318 RRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQ 377

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
            G+++ G +    ++  G++ +      ++D+ S+ G +E A ++ +S+    +  +W A
Sbjct: 378 LGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSA 436

Query: 673 LLNGCRIHKR----IDVMKTIE----KELSVTGTN 699
           ++ G  +H      ID+   ++    K  +VT TN
Sbjct: 437 MIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTN 471



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 4/168 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H ++   G+  +   +T LI+ Y++ G L  +  VF + +  D F+W+ +I     +  
Sbjct: 387 IHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGH 446

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC-GFDKDDVIQT 134
              +I L+ KM   +   +   + ++L ACS  G +  G     ++    G         
Sbjct: 447 GRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYA 506

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIAS--YFDNADVSE 179
            ++   G  GCL++A ++ +KM      S W +++ +   + N +++E
Sbjct: 507 CMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAE 554


>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 194/584 (33%), Positives = 312/584 (53%), Gaps = 7/584 (1%)

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           +W+S      +       L +F  M + G+ P+  T   + +AC +L  LR ++ IH HV
Sbjct: 20  TWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHV 79

Query: 223 LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
           L+   + +  +  + + MY KCG L  A   FV++  R   SW AM+  + +SG+  + L
Sbjct: 80  LKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR-L 138

Query: 283 ESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
              ++ + +    P+ +T++ ++ S   +  L    +V+   IR G+  +   +   LI 
Sbjct: 139 SCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVS-VANTLIA 197

Query: 342 FYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
            Y++CG +   E +   I  G R+++SWN +I+ YA      +A+     M   G  PD 
Sbjct: 198 AYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDI 257

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFER 458
            ++ + LS+C    +L  GL +H H +K+ C  D  V ++LI MYSKCG  + A  LF  
Sbjct: 258 STILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNG 317

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  K+ V W  MI  + + G   EA+ LF+ M     + D VT L  I  C   G LE G
Sbjct: 318 MSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELG 377

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           KW+ +  I+ G++ ++ +  AL DMYAKCG    A+ +F +M+ R VVSW+ MI    ++
Sbjct: 378 KWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALN 437

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQH 637
           G + DA  LF  ML+ G+KPN +TF+ +L AC+H G VE G   FN M + +G+ P + H
Sbjct: 438 GDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDH 497

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           Y+CMVDLL R G +  A ++I SMPF  +  IW ALL+ C++H ++++ K + ++L    
Sbjct: 498 YSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELE 557

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 Y  ++NIYA    W+    +R  M+   ++K PG S I
Sbjct: 558 PQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSII 601



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 277/538 (51%), Gaps = 15/538 (2%)

Query: 70  YMWNNFF---------EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + WN+ F         + +++L+ +M +   T +N  +P VL+AC+ L  L + + +H  
Sbjct: 19  FTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAH 78

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K  F  +  +QT+ +  Y + G L+DA  VF +M  RD+ SW++++  +  +  +   
Sbjct: 79  VLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRL 138

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
             +   M   G+ PD VT+L L ++   + SL    +++   +R  + +D  + N+ I  
Sbjct: 139 SCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAA 198

Query: 241 YSKCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
           YSKCG+L SAE  F +I    R   SW +MI+ Y       KA+  +  ML+    P++ 
Sbjct: 199 YSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDIS 258

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++ +L SC     L  G  VH   ++ G   +   +   LI  Y++CG +     + + 
Sbjct: 259 TILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVN-TLICMYSKCGDVHSARFLFNG 317

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + ++  +SW ++IS YA KG   EA+ L   M+  G  PD  +V + +S CG  G+L+LG
Sbjct: 318 MSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELG 377

Query: 419 LQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             I  + I    KD  V  ++LIDMY+KCG  N A  LF  +  ++VV W +MI     N
Sbjct: 378 KWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALN 437

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYI 536
           G+  +A+ LF  M    ++ + +TFL  +QAC++ G +E+G    + +   YG+   I  
Sbjct: 438 GDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDH 497

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            + + D+  + G L+ A  +  SM  E +   WSA++    +HG++     + +Q+ +
Sbjct: 498 YSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFE 555



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 241/524 (45%), Gaps = 43/524 (8%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++LR    +HAH+L +    +    T  ++ Y + G L  +  VF      D   W  ++
Sbjct: 67  SHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAML 126

Query: 68  KCYMWNNFFEE-SILLYHKM---IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +  + F +  S LL H     IR  A     +  S+LR   SL  LG+   V+   I+
Sbjct: 127 LGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRV-KSLTSLGA---VYSFGIR 182

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVVSWSSIIASYFDNADVSEGL 181
            G   D  +  +++  Y + G L  A  +FD++ S  R VVSW+S+IA+Y +     + +
Sbjct: 183 IGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAV 242

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
             +  M+  G  PD  T+L+L  +C +  +L     +H H ++     D  + N+ I MY
Sbjct: 243 NCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMY 302

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           SKCGD+ SA   F  +  +   SWT MIS Y   G+  +A+  F  M    E+P+L+T++
Sbjct: 303 SKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVL 362

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            ++  C   G L  GK +    I  G+      +  ALI+ YA+CG  ++ +++ + +  
Sbjct: 363 ALISGCGQTGALELGKWIDNYSINNGLKDNV-VVCNALIDMYAKCGGFNDAKELFYTMAN 421

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R ++SW  +I+  A  G  K+ALEL   M   G+ P+  +  + L AC + G ++ GL+ 
Sbjct: 422 RTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLEC 481

Query: 422 HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
              + +     ++  +  ID YS                         M+    + G+  
Sbjct: 482 FNMMTQ-----KYGINPGIDHYS------------------------CMVDLLGRKGHLR 512

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
           EA+ +   M     E D   +   + AC   G++E GK+V  +L
Sbjct: 513 EALEIIKSMP---FEPDSGIWSALLSACKLHGKMEMGKYVSEQL 553



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 214/471 (45%), Gaps = 46/471 (9%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE--PDSFMWAVL 66
           +L  L  +++  +  G+H D   +  LI +Y++ G+L S+  +FD           W  +
Sbjct: 169 SLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSM 228

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I  Y       +++  Y  M+    +       ++L +C     L  G  VH   +K G 
Sbjct: 229 IAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGC 288

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D D  +  +++C Y + G +  AR +F+ M+ +  VSW+ +I++Y +   +SE + +F++
Sbjct: 289 DSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNA 348

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M   G +PD VT+L+L   CG+  +L   + I  + +   +K +  + N+ I MY+KCG 
Sbjct: 349 MEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGG 408

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
              A+  F  +  R   SWT MI+    +G  + ALE F  MLE+  +PN IT + VL +
Sbjct: 409 FNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQA 468

Query: 307 CAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           CA  G +  G      + +K G+ P  D+                               
Sbjct: 469 CAHGGLVERGLECFNMMTQKYGINPGIDH------------------------------- 497

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            ++ ++    RKG  +EALE++  M      PDS   ++ LSAC   G +++G  +   +
Sbjct: 498 -YSCMVDLLGRKGHLREALEIIKSMP---FEPDSGIWSALLSACKLHGKMEMGKYVSEQL 553

Query: 426 IKIDCKDEFVQSSLIDMYSKCGF--------KNLAYLLFERIQQKSVVMWN 468
            +++ +       + ++Y+            +N+ YL   +   +S++  N
Sbjct: 554 FELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVN 604



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 149/302 (49%), Gaps = 5/302 (1%)

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           + +WN        +G ++ AL L  QM+  G+ P++ +    L AC  +  L+    IH 
Sbjct: 18  LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77

Query: 424 HVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           HV+K  C   + FVQ++ +DMY KCG    A+ +F  +  + +  WN+M+ GF Q+G   
Sbjct: 78  HVLK-SCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLD 136

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
               L   M L+ +  D VT L  I +   +  L     V+   I  GV  D+ +   L 
Sbjct: 137 RLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLI 196

Query: 542 DMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
             Y+KCG+L +A+ +FD ++   R+VVSW++MI  Y    +   A + +K MLD G  P+
Sbjct: 197 AAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPD 256

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
             T +N+L +C    ++  G    +     G + D+     ++ + S+ GD+  A  + +
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316

Query: 660 SM 661
            M
Sbjct: 317 GM 318


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 200/611 (32%), Positives = 319/611 (52%), Gaps = 72/611 (11%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L + C +L S R ARS+HG +++     +  + N  I +Y KCG L  A + F ++ +R 
Sbjct: 30  LLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERN 89

Query: 262 T-------------------------------TSWTAMISCYNRSGWFQKALESFVKMLE 290
                                            SW +MI+ + +   F++AL+ FV+M  
Sbjct: 90  VFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHR 149

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
                N  +  + L +C+ L  L+ G  +H  I +     +  ++G  LI+FY++CG + 
Sbjct: 150 DDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDV-FMGSGLIDFYSKCGLVG 208

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
              +V   + E+N++SWN LI+ Y + G + EALE   +M   G  PD  ++AS +SAC 
Sbjct: 209 CARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268

Query: 411 NVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFER---------- 458
            + + + G+QIH  V+K D    D  + ++L+DMY+KCG  N A  +F+R          
Sbjct: 269 TLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSET 328

Query: 459 ---------------------IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
                                I+QK +V WN++I G+ QNG + EA+ LF  +    +  
Sbjct: 329 TMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCP 388

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR------KDIYIDTALTDMYAKCGDLQ 551
              TF   + A +N+  LE G+  H  ++ +G R       DI++  +L DMY KCG ++
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
              RVF++M E++ VSW+ MI  Y  +G   +A  LF++ML+SG KP+ VT +  L ACS
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H+G VEEG+ YF +M +  G+ P   HY CMVDLL R+G +E A  +I SMP   +  +W
Sbjct: 509 HAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVW 568

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
            +LL+ C++H+ I + K + +++       +G Y LL+N+Y+E G W +   VR +M   
Sbjct: 569 SSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRR 628

Query: 731 GLKKVPGYSTI 741
           G+ K PG S I
Sbjct: 629 GVVKQPGCSWI 639



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 167/557 (29%), Positives = 273/557 (49%), Gaps = 81/557 (14%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  +L  C  L        VHGR+I+  F ++  IQ  ++  YG+ G LD ARKVFD+M+
Sbjct: 27  FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86

Query: 158 SRDVVS-------------------------------WSSIIASYFDNADVSEGLKMFHS 186
            R+V S                               W+S+IA +  +    E L  F  
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M R+    +  +  S   AC  L  L+    IHG + + K  +D  +G+  I  YSKCG 
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +  A R F  +E++   SW  +I+CY ++G   +ALE+F +M E+  +P+ +TL +V+ +
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSA 266

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH--------- 357
           CA L   +EG  +H ++++         LG AL++ YA+CG+++E   V           
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVS 326

Query: 358 ----------------------AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
                                  I +++I+SWN LI+ Y + G ++EAL L   ++   +
Sbjct: 327 ETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESV 386

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-------DEFVQSSLIDMYSKCGF 448
            P  ++  + L+A  N+  L+LG Q H HV+K   +       D FV +SLIDMY KCG 
Sbjct: 387 CPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGS 446

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
                 +FE + +K  V WN+MI G+ QNG  +EA+ LF +M  +  + D VT +  + A
Sbjct: 447 VEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCA 506

Query: 509 CSNIGQLEKGKWV------HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           CS+ G +E+G+         H L+     KD Y  T + D+  + G L+ A+ + +SM +
Sbjct: 507 CSHAGLVEEGRRYFFSMTKEHGLLPV---KDHY--TCMVDLLGRAGCLEEAKDLIESMPK 561

Query: 563 R-NVVSWSAMIDCYGMH 578
           + + V WS+++    +H
Sbjct: 562 QPDAVVWSSLLSACKVH 578



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 249/542 (45%), Gaps = 77/542 (14%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           R    +H  L+ T    +     RLI+ Y + G L  +R VFD   E + F +  +I   
Sbjct: 41  RDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTL 100

Query: 71  M----------------------WNNF---------FEESILLYHKMIREQATISNFIYP 99
           M                      WN+          FEE++  + +M R+   ++++ + 
Sbjct: 101 MRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFG 160

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S L ACS L DL  G ++HG I K  +  D  + + ++  Y + G +  AR+VFD M  +
Sbjct: 161 SGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEK 220

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           +VVSW+ +I  Y  N    E L+ F  M   G +PD VT+ S+  AC  L + +    IH
Sbjct: 221 NVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIH 280

Query: 220 GHVLRR-KIKIDGPLGNSFIVMYSKCG-------------------------------DL 247
             V++  K + D  LGN+ + MY+KCG                                +
Sbjct: 281 ARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASV 340

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            +A   F  I+++   SW A+I+ Y ++G  ++AL  F  +      P   T   +L + 
Sbjct: 341 KAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNAS 400

Query: 308 AGLGWLREGKSVHCQIIRKGM----GPEYD-YLGPALIEFYAECGKMSECEKVIHAIGER 362
           A L  L  G+  H  +++ G     G E D ++G +LI+ Y +CG + E  +V   + E+
Sbjct: 401 ANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEK 460

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + +SWN +I  YA+ G   EALEL  +M   G  PD  ++  +L AC + G ++ G +  
Sbjct: 461 DHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYF 520

Query: 423 GHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMI--CGFY 475
             + K    +  KD +  + ++D+  + G    A  L E + +Q   V+W+S++  C  +
Sbjct: 521 FSMTKEHGLLPVKDHY--TCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVH 578

Query: 476 QN 477
           +N
Sbjct: 579 RN 580



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 219/502 (43%), Gaps = 77/502 (15%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C+ L+ L    ++H  +  +    D    + LI+ Y++ G +  +R VFD  +E +   
Sbjct: 165 ACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVS 224

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  LI CY  N    E++  + +M             SV+ AC++L     G ++H R++
Sbjct: 225 WNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVV 284

Query: 123 KCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR---------------------- 159
           K   F  D ++  +++  Y + G +++AR VFD+M  R                      
Sbjct: 285 KSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAAR 344

Query: 160 ---------DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
                    D+VSW+++IA Y  N +  E L +F  + RE V P   T  +L  A   L 
Sbjct: 345 SMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLA 404

Query: 211 SLRPARSIHGHVLRRKIKI------DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
            L   R  H HV++   +       D  +GNS I MY KCG +    R F  + ++   S
Sbjct: 405 DLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVS 464

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W  MI  Y ++G+  +ALE F KMLE  E+P+ +T+I  L +C+  G + EG+     + 
Sbjct: 465 WNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMT 524

Query: 325 RK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           ++ G+ P  D+                                +  ++    R G  +EA
Sbjct: 525 KEHGLLPVKDH--------------------------------YTCMVDLLGRAGCLEEA 552

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
            +L+  M      PD+   +S LSAC    ++ LG  +   + +ID         L +MY
Sbjct: 553 KDLIESMPK---QPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMY 609

Query: 444 SKCGFKNLAYLLFERIQQKSVV 465
           S+ G    A  + + ++++ VV
Sbjct: 610 SELGRWGDAVSVRKLMRRRGVV 631



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%)

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D   F   +  C  +      + VH +LI     ++++I   L D+Y KCG L  A++VF
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           D MSERNV S++++I      G ++++A LF  M
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLM 116



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY------DPPASTRLIESYAEMGSLRSSRLVFD 53
           L  +  NL  L    + H+H++  G  +      D      LI+ Y + GS+     VF+
Sbjct: 396 LLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFE 455

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
              E D   W  +I  Y  N +  E++ L+ KM+       +      L ACS  G +  
Sbjct: 456 NMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEE 515

Query: 114 GEKVHGRIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
           G +    + K  G        T ++   G  GCL++A+ + + M  + D V WSS++++
Sbjct: 516 GRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSA 574


>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 563

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 192/567 (33%), Positives = 313/567 (55%), Gaps = 6/567 (1%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I+    N  F +++ LY KM         + +PSV+ AC++LGD   G  V   ++
Sbjct: 1   WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + GF  D  I  +++  Y  FG L  AR VF++MT RD+VSW+S+I+ Y  N    E L+
Sbjct: 61  EIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALE 120

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +++ +   G++PD  T+ S+  ACG L +++    IHG V +  + ID  + N  + MY 
Sbjct: 121 IYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYF 180

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           K G L+ A+R F K+  +   SW  +I  Y +   F+++++ F +M++ +  P+L+T+ +
Sbjct: 181 KFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVK-RFRPDLLTITS 239

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL-IEFYAECGKMSECEKVIHAIGE 361
           VL +C  L  L  GK VH  I+R G+  E+D     + I+ YA+CG +    K    I  
Sbjct: 240 VLRACGLLRDLEFGKFVHDYILRSGI--EFDVTASNIVIDTYAKCGDLLASRKAFDRIKC 297

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+ +SWN LI+ Y +     E ++L  +M+   L PDS +  + LS    +   +LG +I
Sbjct: 298 RDSVSWNTLINGYIQSRSYGEGVKLFKKMKM-DLKPDSITFVTLLSISTRLADTELGKEI 356

Query: 422 HGHVIKIDCKDEFVQS-SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H  + K+    + V S +L+DMYSKCG    +  +FE ++ + +V WN++I    Q  + 
Sbjct: 357 HCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDC 416

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
             A  +  QM    L  D  T L  +  CS I    +GK VH     +G    + +  AL
Sbjct: 417 TLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNAL 476

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            +MY+KC +L+   RVF+ M  ++VV+W+A++  YGM+G+   A   F +M ++GI P+ 
Sbjct: 477 IEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGIIPDH 536

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMR 627
           + F+ I++ACSHSGSVEEG   F+ M+
Sbjct: 537 IAFVAIIYACSHSGSVEEGLACFDHMK 563



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 266/506 (52%), Gaps = 8/506 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +  H+L  G  +D      L++ YA  G L  +R VF+     D   W  LI  Y  N +
Sbjct: 55  VQNHVLEIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGY 114

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           ++E++ +Y+++        NF   SVL AC  L  +  GE +HG + K G + D ++   
Sbjct: 115 WDEALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNG 174

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y +FG L DA++VF+KM  +D VSW+++I  Y       E +++F  MV+    PD
Sbjct: 175 LLSMYFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKR-FRPD 233

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T+ S+  ACG L  L   + +H ++LR  I+ D    N  I  Y+KCGDLL++ + F 
Sbjct: 234 LLTITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFD 293

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +I+ R + SW  +I+ Y +S  + + ++ F KM ++  +P+ IT +T+L     L     
Sbjct: 294 RIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKM-KMDLKPDSITFVTLLSISTRLADTEL 352

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +HC + + G   +   +  AL++ Y++CG + +  KV   +  R+I++WN +I+   
Sbjct: 353 GKEIHCDLAKLGFDSDL-VVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACV 411

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF- 434
           +      A  ++ QM+   L+PD  ++   L  C  + + + G ++H    K   +    
Sbjct: 412 QAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVP 471

Query: 435 VQSSLIDMYSKCGFKNLAYLL--FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           V ++LI+MYSKC   NL Y +  FE ++ K VV W +++  +   G   +A+  F +M  
Sbjct: 472 VGNALIEMYSKCS--NLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEE 529

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKG 518
             +  D + F+  I ACS+ G +E+G
Sbjct: 530 AGIIPDHIAFVAIIYACSHSGSVEEG 555



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 268/514 (52%), Gaps = 5/514 (0%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+S+I +   N   S+ L ++  M    V+PD  T  S+  AC  L        +  HVL
Sbjct: 1   WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
                 D  +GN+ + MY++ GDL+ A   F ++  R   SW ++IS Y+ +G++ +ALE
Sbjct: 61  EIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALE 120

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
            + ++     +P+  TL +VL +C GL  ++EG+ +H  + + GM  +   +   L+  Y
Sbjct: 121 IYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDV-IMSNGLLSMY 179

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
            + G++ + ++V + +  ++ +SWN LI  Y +  + +E+++L  +M      PD  ++ 
Sbjct: 180 FKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVK-RFRPDLLTIT 238

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSL-IDMYSKCGFKNLAYLLFERIQQK 462
           S L ACG +  L+ G  +H ++++   + +   S++ ID Y+KCG    +   F+RI+ +
Sbjct: 239 SVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCR 298

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
             V WN++I G+ Q+ +  E + LF +M ++ L+ D +TF+T +   + +   E GK +H
Sbjct: 299 DSVSWNTLINGYIQSRSYGEGVKLFKKMKMD-LKPDSITFVTLLSISTRLADTELGKEIH 357

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             L   G   D+ +  AL DMY+KCG+++ + +VF++M  R++V+W+ +I          
Sbjct: 358 CDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCT 417

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMV 642
            A  +  QM +  + P+  T + IL  CS   +  +GK        FG E  +     ++
Sbjct: 418 LAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALI 477

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           ++ S+  +++   ++   M    +   W AL++ 
Sbjct: 478 EMYSKCSNLKYCIRVFEDMK-TKDVVTWTALVSA 510



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 220/414 (53%), Gaps = 5/414 (1%)

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W ++I     +G F KAL+ + KM +   +P+  T  +V+ +CA LG    G  V   ++
Sbjct: 1   WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
             G G +  Y+G AL++ YA  G + +   V   +  R+I+SWN LIS Y+  G   EAL
Sbjct: 61  EIGFGFDL-YIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEAL 119

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS-LIDMY 443
           E+  +++  GL PD+F+++S L ACG + +++ G  IHG V K+    + + S+ L+ MY
Sbjct: 120 EIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMY 179

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
            K G    A  +F ++  K  V WN++ICG+ Q     E+I LF +M +     D +T  
Sbjct: 180 FKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREM-VKRFRPDLLTIT 238

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           + ++AC  +  LE GK+VH  ++  G+  D+     + D YAKCGDL  +++ FD +  R
Sbjct: 239 SVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCR 298

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           + VSW+ +I+ Y       +   LFK+M    +KP+ +TF+ +L   +     E GK   
Sbjct: 299 DSVSWNTLINGYIQSRSYGEGVKLFKKM-KMDLKPDSITFVTLLSISTRLADTELGKEIH 357

Query: 624 NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
             +   G + DL     +VD+ S+ G+++ + K+  +M    +   W  ++  C
Sbjct: 358 CDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVR-DIVTWNTIIAAC 410



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 207/414 (50%), Gaps = 11/414 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +   G++ D   S  L+  Y + G L  ++ VF+     D   W  LI  Y     
Sbjct: 156 IHGLVEKLGMNIDVIMSNGLLSMYFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMEL 215

Query: 76  FEESILLYHKMIR----EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           FEESI L+ +M++    +  TI+     SVLRAC  L DL  G+ VH  I++ G + D  
Sbjct: 216 FEESIQLFREMVKRFRPDLLTIT-----SVLRACGLLRDLEFGKFVHDYILRSGIEFDVT 270

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
               ++ TY + G L  +RK FD++  RD VSW+++I  Y  +    EG+K+F  M +  
Sbjct: 271 ASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKM-KMD 329

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           ++PD +T ++L      L      + IH  + +     D  + N+ + MYSKCG++  + 
Sbjct: 330 LKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSL 389

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F  ++ R   +W  +I+   ++     A     +M   +  P++ TL+ +L  C+ + 
Sbjct: 390 KVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIA 449

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
             R+GK VH    + G       +G ALIE Y++C  +  C +V   +  +++++W  L+
Sbjct: 450 AKRQGKEVHACTFKFGFESTVP-VGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALV 508

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           S Y   G  K+AL    +M+  G++PD  +  + + AC + GS++ GL    H+
Sbjct: 509 SAYGMYGEGKKALRAFAEMEEAGIIPDHIAFVAIIYACSHSGSVEEGLACFDHM 562



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 168/317 (52%), Gaps = 4/317 (1%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  LR L     +H ++L +G+ +D  AS  +I++YA+ G L +SR  FD  K  D
Sbjct: 240 VLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRD 299

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W  LI  Y+ +  + E + L+ KM +      +  + ++L   + L D   G+++H 
Sbjct: 300 SVSWNTLINGYIQSRSYGEGVKLFKKM-KMDLKPDSITFVTLLSISTRLADTELGKEIHC 358

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + K GFD D V+  +++  Y + G + D+ KVF+ M  RD+V+W++IIA+     D + 
Sbjct: 359 DLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTL 418

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
             +M   M  E + PD  T+L +   C  + + R  + +H    +   +   P+GN+ I 
Sbjct: 419 AFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALIE 478

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKC +L    R F  ++ +   +WTA++S Y   G  +KAL +F +M E    P+ I 
Sbjct: 479 MYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGIIPDHIA 538

Query: 300 LITVLGSCAGLGWLREG 316
            + ++ +C+  G + EG
Sbjct: 539 FVAIIYACSHSGSVEEG 555


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 206/646 (31%), Positives = 349/646 (54%), Gaps = 10/646 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSR 159
           VL+AC S+ D   GE++H   +KCG D+ +V   TS++  Y + G + +  +VF+ M  +
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           +VV+W+S++         SE + +F  M  EG+ P+  T  S+  A     +L   + +H
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH 224

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              ++   +    + NS + MY+KCG +  A+  F  +E R   SW  +++    +    
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL 284

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +AL+ F +      +    T  TV+  CA L  L   + +H  +++ G     + +  AL
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM-TAL 343

Query: 340 IEFYAECGKMSECEKVIH-AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
            + Y++CG++++   +     G RN++SW  +IS   + G    A+ L  +M+   +MP+
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+ ++ L A  ++    L  QIH  VIK + +    V ++L+  YSK G    A  +F+
Sbjct: 404 EFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFK 459

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS-NIGQLE 516
            I+QK VV W++M+    Q G+   A  LF++M +  ++ +E T  + I AC+     ++
Sbjct: 460 MIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVD 519

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           +G+  H   I Y     I + +AL  MY++ G++ +AQ VF+  ++R++VSW++MI  Y 
Sbjct: 520 QGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYA 579

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDL 635
            HG    A   F+QM  SGI+ + VTF+ ++  C+H+G V EG+ YF++M R   + P +
Sbjct: 580 QHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTM 639

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HYACMVDL SR+G ++    +I  MPFPA   +W  LL  CR+HK +++ K    +L  
Sbjct: 640 EHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLS 699

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +D+  Y LLSNIYA  G W E  +VR +M+   +KK  G S I
Sbjct: 700 LEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWI 745



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 303/626 (48%), Gaps = 50/626 (7%)

Query: 31  ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           A T L++ Y + GS+     VF+   + +   W  L+          E + L+ +M  E 
Sbjct: 137 AGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG 196

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
              + F + SVL A +S G L  G++VH + +K G      +  S++  Y + G ++DA+
Sbjct: 197 IWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAK 256

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH---SMVREGVEPDFVTMLSLAEACG 207
            VF+ M +RD+VSW++++A    N    E L++FH   + + +  +  + T++ L   C 
Sbjct: 257 SVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKL---CA 313

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF-VKIEKRCTTSWT 266
            L  L  AR +H  VL+    + G +  +    YSKCG+L  A   F +    R   SWT
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWT 373

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           A+IS   ++G    A+  F +M E +  PN  T   +L   A L  L     +H Q+I+ 
Sbjct: 374 AIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--ASLSIL--PPQIHAQVIKT 429

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                   +G AL+  Y++ G   +   +   I ++++++W+ ++S +A+ G  + A  L
Sbjct: 430 NY-QHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYL 488

Query: 387 LVQMQTWGLMPDSFSVASSLSACG-NVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYS 444
             +M   G+ P+ F+++S + AC      +  G Q H   IK    D   V S+L+ MYS
Sbjct: 489 FNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYS 548

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           + G  + A ++FER   + +V WNSMI G+ Q+G S++AI  F QM  + ++MD VTFL 
Sbjct: 549 RKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLA 608

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            I  C++ G + +G+               Y D+ + D            ++  +M    
Sbjct: 609 VIMGCTHNGLVVEGQQ--------------YFDSMVRD-----------HKINPTMEH-- 641

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
              ++ M+D Y   G+L++  SL + M         + +  +L AC    +VE GK  F+
Sbjct: 642 ---YACMVDLYSRAGKLDETMSLIRDM---PFPAGAMVWRTLLGACRVHKNVELGK--FS 693

Query: 625 AMRIFGVEP-DLQHYACMVDLLSRSG 649
           A ++  +EP D   Y  + ++ + +G
Sbjct: 694 ADKLLSLEPHDSSTYVLLSNIYAAAG 719



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 210/419 (50%), Gaps = 29/419 (6%)

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y R G   + L+ F          +  TL  VL +C  +     G+ +HC  ++ G    
Sbjct: 74  YARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
               G +L++ Y +CG + E  +V   + ++N+++W  L++  A   M  E + L  +M+
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKN 450
             G+ P+ F+ AS LSA  + G+L LG ++H   +K  C+   FV +SL++MY+KCG   
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F  ++ + +V WN+++ G   N   LEA+ LFH+      +M + T+ T I+ C+
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD-SMSERNVVSWS 569
           N+ QL   + +H  ++ +G      + TAL D Y+KCG+L  A  +F  +   RNVVSW+
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWT 373

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF-------MNILWACSHSGSVEEGKFY 622
           A+I     +G +  A  LF +M +  + PNE T+       ++IL    H+  ++    +
Sbjct: 374 AIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQH 433

Query: 623 F------------------NAMRIFGV--EPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
                              +A+ IF +  + D+  ++ M+   +++GD EGA  + + M
Sbjct: 434 IPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKM 492



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 212/443 (47%), Gaps = 21/443 (4%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           R+HA  +  G          L+  YA+ G +  ++ VF+  +  D   W  L+     N 
Sbjct: 222 RVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNE 281

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ L+H+       ++   Y +V++ C++L  L    ++H  ++K GF     + T
Sbjct: 282 CELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMT 341

Query: 135 SILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           ++   Y + G L DA  +F   T SR+VVSW++II+    N D+   + +F  M  + V 
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+  T  ++ +A   L  L P   IH  V++   +    +G + +  YSK G    A   
Sbjct: 402 PNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSI 457

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA-GLGW 312
           F  IE++   +W+AM+SC+ ++G  + A   F KM     +PN  T+ +V+ +CA     
Sbjct: 458 FKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG 517

Query: 313 LREGKSVHCQIIRKGMGPEYDY-----LGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           + +G+  H   I+      Y Y     +  AL+  Y+  G +   + V     +R+++SW
Sbjct: 518 VDQGRQFHAISIK------YRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI- 426
           N +IS YA+ G S +A+E   QM+  G+  D  +  + +  C + G +  G Q    ++ 
Sbjct: 572 NSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR 631

Query: 427 --KIDCKDEFVQSSLIDMYSKCG 447
             KI+   E   + ++D+YS+ G
Sbjct: 632 DHKINPTMEHY-ACMVDLYSRAG 653



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 2/312 (0%)

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++ +YAR+GM  E L+     +  G++ DS +++  L AC +V    LG Q+H   +K
Sbjct: 68  NRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 428 I--DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
              D  +    +SL+DMY KCG       +FE + +K+VV W S++ G        E + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF +M    +  +  TF + + A ++ G L+ G+ VH + + +G R  +++  +L +MYA
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG ++ A+ VF+ M  R++VSW+ ++    ++    +A  LF +   +  K  + T+  
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           ++  C++   +   +   + +   G          + D  S+ G++  A  +        
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 666 NGSIWGALLNGC 677
           N   W A+++GC
Sbjct: 368 NVVSWTAIISGC 379


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 164/482 (34%), Positives = 288/482 (59%), Gaps = 5/482 (1%)

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLE-VKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           +W +M+  +  S   ++AL+S+ +MLE  +  P+  T  ++L  CA L   + GK +H Q
Sbjct: 45  TWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQ 104

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +++  +  +  Y+   L+  YA CG +     +   +G RN + W  +IS Y +     E
Sbjct: 105 VVKYMLHSDL-YIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNE 163

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLID 441
           AL L  +M+  G  PD  ++A+ +SAC  +  L +G+++H H+ ++D K    + S+L++
Sbjct: 164 ALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVN 223

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEV 500
           MY+KCG    A  +F+++  K V  W+++I G+ +N  S EA+ LF ++     +  +EV
Sbjct: 224 MYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEV 283

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T L  I AC+ +G LE G+WVH  +        + ++ +L DM++KCGD+  A+R+FDSM
Sbjct: 284 TILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSM 343

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG- 619
           S ++++SW++M++ + +HG   +A + F+ M  + ++P+E+TF+ +L ACSH+G V+EG 
Sbjct: 344 SYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGK 403

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           K ++    ++GV    +HY CMVDLL R+G +  A + I  MP   +G+IWG++L  CR+
Sbjct: 404 KLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRV 463

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +  +++ +   + L      ++G Y LLSNIYA+   W+E  KVR +M   G++K PG S
Sbjct: 464 YNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCS 523

Query: 740 TI 741
           ++
Sbjct: 524 SV 525



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 244/469 (52%), Gaps = 14/469 (2%)

Query: 20  LLVTGLHYDPPASTRLIESYAEMGSLRS--SRLVFDTFKEPDSFMWAVLIKCYMWNNFFE 77
           ++VTG  +  P+  +LI     MGSL    +  VF   +E D   W  +++ ++ +N   
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60

Query: 78  ESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
            ++  Y +M+ R +     F +PS+L+ C+ L +   G+ +HG+++K     D  I+T++
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           L  Y   G L  AR +F++M  R+ V W+S+I+ Y  N   +E L ++  M  +G  PD 
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           VTM +L  AC EL  L     +H H+    +KI   LG++ + MY+KCGDL +A + F K
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLRE 315
           +  +   +W+A+I  Y ++    +AL+ F ++       PN +T++ V+ +CA LG L  
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ VH  I R   G     L  +LI+ +++CG +   +++  ++  ++++SWN +++ +A
Sbjct: 301 GRWVHDYITRTQKGHSVS-LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFA 359

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV---IKIDCKD 432
             G+ +EAL     MQT  L PD  +    L+AC + G +Q G ++   +     +  K 
Sbjct: 360 LHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS 419

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQ--QKSVVMWNSMI--CGFYQN 477
           E     ++D+  + G    A   F R+   Q    +W SM+  C  Y N
Sbjct: 420 EHY-GCMVDLLCRAGLLAEAR-EFIRVMPLQPDGAIWGSMLGACRVYNN 466



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 217/450 (48%), Gaps = 35/450 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH  ++   LH D    T L+  YA  G L+S+R +F+     +  +W  +I  YM N+ 
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E++LLY KM  +  +       +++ AC+ L DLG G K+H  I +       V+ ++
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REGVEP 194
           ++  Y + G L  AR+VFDK++ +DV +WS++I  Y  N   +E L++F  +     + P
Sbjct: 221 LVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + VT+L++  AC +L  L   R +H ++ R +      L NS I M+SKCGD+ +A+R F
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIF 340

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +  +   SW +M++ +   G  ++AL  F  M     +P+ IT I VL +C+  G ++
Sbjct: 341 DSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQ 400

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           EGK +  +I       E  Y G  L   +  C                       ++   
Sbjct: 401 EGKKLFYEI-------EALY-GVRLKSEHYGC-----------------------MVDLL 429

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            R G+  EA E +  M    L PD     S L AC    +L+LG +    ++K++  ++ 
Sbjct: 430 CRAGLLAEAREFIRVMP---LQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDG 486

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           V   L ++Y+K    N    + E + +K +
Sbjct: 487 VYILLSNIYAKRKMWNEVKKVRELMNEKGI 516



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 122/226 (53%), Gaps = 2/226 (0%)

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM-DEVTFLTAIQACS 510
           AY +F   ++  V+ WNSM+  F  +     A+  + +M      + D  TF + ++ C+
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            + + + GK +H +++ Y +  D+YI+T L +MYA CGDL++A+ +F+ M  RN V W++
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           MI  Y  +   N+A  L+K+M + G  P+EVT   ++ AC+    +  G    + +R   
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           ++      + +V++ ++ GD++ A ++   +    +   W AL+ G
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLS-DKDVYAWSALIFG 255



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 12/212 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C  L+ L    +LH+H+    +       + L+  YA+ G L+++R VFD   + D
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKD 245

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNF-----IYPSVLRACSSLGDLGSG 114
            + W+ LI  Y+ NN   E++ L+    RE A  SN         +V+ AC+ LGDL +G
Sbjct: 246 VYAWSALIFGYVKNNRSTEALQLF----REVAGGSNMRPNEVTILAVISACAQLGDLETG 301

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             VH  I +        +  S++  + + G +D A+++FD M+ +D++SW+S++  +  +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALH 361

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
               E L  F  M    ++PD +T + +  AC
Sbjct: 362 GLGREALAQFRLMQTTDLQPDEITFIGVLTAC 393


>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 198/637 (31%), Positives = 337/637 (52%), Gaps = 10/637 (1%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G ++H +IIK GF  D   Q +++  Y + G L    KVF +M  +++VSW+ +++    
Sbjct: 95  GSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQ 154

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL--C----SLRPARSIHGHVLRRKI 227
           N +   GL ++  M+R G+ P+   +  + +AC  L  C    +L   R IHG +++ ++
Sbjct: 155 NGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEV 214

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
                + NS + MY K G  L A + F +++ +   SW  + +  ++    ++    F K
Sbjct: 215 GFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHK 274

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           ++    +PN +T   +   C     L  G   HC   R G+  E   +  +LI  ++ CG
Sbjct: 275 LMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEAS-VTSSLINMFSRCG 333

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            M     V  +   ++I + N +IS Y     + EAL L   +   GL  D  + +S+L 
Sbjct: 334 AMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALE 393

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC    + +LG Q+HG ++K     + +V SSL+  Y   G  + ++  F  +++  +V 
Sbjct: 394 ACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVS 453

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           W +MI      G S EAI L +++     + DE  F +    C+ I    + K VH  ++
Sbjct: 454 WGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVV 513

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAA 585
             G    +++ +A+ D YAKCGD++ A+RVFD  S  R+V+ ++ M+  Y  HG + +A 
Sbjct: 514 KMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAV 573

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDL 644
             F++M  + ++P++ TF++++ ACSH G VE+G  +F +M + +G++P   +Y C+VDL
Sbjct: 574 ETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDL 633

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
            SR+G +E A  +I +MPFP   +IW +LLNGCRIH   ++ +   K+L      ++  Y
Sbjct: 634 FSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAY 693

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            LLS +Y+EEG+W +  KVR  M   GL K PG S I
Sbjct: 694 VLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWI 730



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/577 (25%), Positives = 278/577 (48%), Gaps = 11/577 (1%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +++HA ++  G   D  +   LI  Y + G L     VF      +   W +++   + N
Sbjct: 96  SQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQN 155

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLG------DLGSGEKVHGRIIKCGFD 127
             FE  + +Y +MIR     + F    V +AC++LG      +L  G ++HG II+    
Sbjct: 156 GEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVG 215

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
               +  S++  Y + G    A KVFD++  +D++SW+++ A      D  E  + FH +
Sbjct: 216 FSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKL 275

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           +  G++P+ VT   L   CGE   L      H    R  I  +  + +S I M+S+CG +
Sbjct: 276 MLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAM 335

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A   F     +   +   MIS YN +    +AL  F  +  +  E +  T  + L +C
Sbjct: 336 RMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEAC 395

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
                 + G+ +H  I++ G   +  Y+  +L++ Y   G + +  +  + +   +++SW
Sbjct: 396 FRTENQKLGRQMHGTIVKSGFASQ-GYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSW 454

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
             +IS    KG S EA+ LL +++  G  PD F   S  + C  + + +    +H  V+K
Sbjct: 455 GAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVK 514

Query: 428 IDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAIN 485
           +  +   FV S++ID Y+KCG    A  +F++  + + V+++N+M+  +  +G   EA+ 
Sbjct: 515 MGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVE 574

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMY 544
            F +M L  LE  + TF++ I ACS++G +E+G      + + YG+         L D++
Sbjct: 575 TFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLF 634

Query: 545 AKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQ 580
           ++ G L+ A+ + ++M      + W ++++   +HG 
Sbjct: 635 SRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGN 671



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/532 (22%), Positives = 233/532 (43%), Gaps = 12/532 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL    ++H  ++ + + +       L++ Y + G    +  VFD  ++ D   W  +  
Sbjct: 198 NLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFA 257

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
                +   E    +HK++      +   +  + R C    DL SG + H    + G   
Sbjct: 258 GLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISD 317

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  + +S++  +   G +  A  VFD    + + + + +I+ Y  N   +E L +F ++ 
Sbjct: 318 EASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLN 377

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G+E D  T  S  EAC    + +  R +HG +++      G + +S +  Y   G L 
Sbjct: 378 GLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLD 437

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            +   F  +E+    SW AMIS     G+  +A+    ++ E   +P+     ++   CA
Sbjct: 438 DSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCA 497

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSW 367
           G+   R+ KSVH  +++ G    + ++  A+I+ YA+CG +    +V       R+++ +
Sbjct: 498 GIAAYRQTKSVHSLVVKMGY-EAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILF 556

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++  YA  G+ +EA+E   +M+   L P   +  S +SAC ++G ++ G  I    + 
Sbjct: 557 NTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQG-DIFFKSMN 615

Query: 428 ID-----CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSL 481
           +D       D +    L+D++S+ GF   A  + E +       +W S++ G   +GN  
Sbjct: 616 LDYGMDPSPDNY--GCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNK- 672

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           E      +  L  +  ++  ++   +  S  G       V   +I  G+ KD
Sbjct: 673 ELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKD 724



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 9/276 (3%)

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           D  +++++L+   N   + LG QIH  +IK+  C D F Q++LI MY+KCGF      +F
Sbjct: 75  DPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVF 134

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN----- 511
             +  K++V W  ++ G  QNG     + ++ +M    L  +E       +AC+      
Sbjct: 135 GEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCL 194

Query: 512 -IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G L  G+ +H  +I   V     +  +L DMY K G    A +VFD + +++++SW+ 
Sbjct: 195 VVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNT 254

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIF 629
           +           +    F +++ +G+KPN VTF  +   C  +  +  G +F+  A R F
Sbjct: 255 VFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFR-F 313

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           G+  +    + ++++ SR G +  A  +  S PF +
Sbjct: 314 GISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKS 349



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 5/159 (3%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKEP 58
           +F  C  +   R+   +H+ ++  G       ++ +I++YA+ G + ++R VFD T +  
Sbjct: 492 IFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFR 551

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D  ++  ++  Y  +    E++  + KM       S   + SV+ ACS LG +  G+   
Sbjct: 552 DVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFF 611

Query: 119 GRI-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
             + +  G D        ++  +   G L+DA+ + + M
Sbjct: 612 KSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETM 650


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 177/465 (38%), Positives = 271/465 (58%), Gaps = 4/465 (0%)

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           + L  + +ML     P+  T+  VL +CA    +REG+ VH Q I+ G+  +  Y+   L
Sbjct: 108 EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDV-YVSNTL 166

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           +  YA C  +    KV     +R+++SW  +I  Y + G ++E + L  +M    L  D 
Sbjct: 167 MRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADG 226

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK--DEFVQSSLIDMYSKCGFKNLAYLLFE 457
            ++   LS+C  +G L+LG ++H ++I+      D FV ++L+DMY KCG  N A  +F+
Sbjct: 227 MTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQ 286

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +  K+VV WNSMI G  Q G   E++ +F +M    ++ D+VT +  + +C+N+G LE 
Sbjct: 287 EMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLEL 346

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           GKWVH  L    +R D +I  AL DMYAKCG +  A  VF +M+ ++V S++AMI    M
Sbjct: 347 GKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAM 406

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQ 636
           HGQ   A  LF +M   GI+P+EVTF+ +L ACSH G VEEG+ YF  M  I+ + P L+
Sbjct: 407 HGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLE 466

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HY CMVDLL R+G I  A + I +MP   +  + GALL  C+IH ++++ +++ K++   
Sbjct: 467 HYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKI 526

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               +G Y L+SNIY+    W +  K+R  M+   L+K PG S+I
Sbjct: 527 EPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSI 571



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/569 (26%), Positives = 277/569 (48%), Gaps = 42/569 (7%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDP--PASTRLIESYAEMGSL--RSSRLVFDTFKEPD 59
            ++C +++ L ++HA ++ T    D     STRL    A+   +  R +  +    + P+
Sbjct: 29  LQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPN 88

Query: 60  SFMWAVLIK-CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
             ++  +I+     NN   E +++Y +M+ +     N+  P VL+AC+    +  GE+VH
Sbjct: 89  LPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVH 148

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G+ IK G   D  +  +++  Y     +  ARKVFD    RD+VSW+++I  Y       
Sbjct: 149 GQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAR 208

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSF 237
           EG+ +F  M  E ++ D +T++ +  +C  L  LR  R +H +++R   + +D  +GN+ 
Sbjct: 209 EGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNAL 268

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCGD   A + F ++  +   SW +MIS   + G F+++L  F KM  +  +P+ 
Sbjct: 269 VDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDD 328

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +TL+ VL SCA LG L  GK VH  + R  +  +  ++G AL++ YA+CG + +   V  
Sbjct: 329 VTLVAVLNSCANLGVLELGKWVHAYLDRNQIRAD-GFIGNALVDMYAKCGSIDQACWVFQ 387

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           A+  +++ S+  +I   A  G   +AL+L  +M   G+ PD  +    L+AC +VG ++ 
Sbjct: 388 AMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 447

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           G +                           F++++ +   R Q +    +  M+    + 
Sbjct: 448 GRKY--------------------------FEDMSTIYNLRPQLEH---YGCMVDLLGRA 478

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYI 536
           G   EA      M    +E D       + AC   G++E G+ V  K+     RKD  Y+
Sbjct: 479 GLINEAEEFIRNM---PIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYV 535

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNV 565
              ++++Y+     + A ++  +M ERN+
Sbjct: 536 --LMSNIYSSANRWRDALKLRKTMKERNL 562



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 193/375 (51%), Gaps = 13/375 (3%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ ++ ++ L +C  +  L   K +H  II+    P+            A C +    + 
Sbjct: 20  PHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQL--TISTRLSALCAQSLPIDP 74

Query: 355 -----VIHAIGERNILSWNMLISEYARKGM-SKEALELLVQMQTWGLMPDSFSVASSLSA 408
                ++  +   N+  +N +I   A     S E L +  QM + G++PD++++   L A
Sbjct: 75  RYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKA 134

Query: 409 CGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           C    +++ G ++HG  IK+    D +V ++L+ MY+ C     A  +F+   Q+ +V W
Sbjct: 135 CAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSW 194

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI- 526
            +MI G+ + G + E + LF +M    L+ D +T +  + +C+ +G L  G+ +H  +I 
Sbjct: 195 TTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIR 254

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
           +  V  D+++  AL DMY KCGD   A++VF  M  +NVVSW++MI      GQ  ++  
Sbjct: 255 NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLY 314

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
           +F++M   G+KP++VT + +L +C++ G +E GK+    +    +  D      +VD+ +
Sbjct: 315 MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYA 374

Query: 647 RSGDIEGAFKMIHSM 661
           + G I+ A  +  +M
Sbjct: 375 KCGSIDQACWVFQAM 389



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 139/287 (48%), Gaps = 11/287 (3%)

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGF-----KNL 451
           P   S  S+L  C ++  L+   QIH  +IK     +   +    + + C          
Sbjct: 20  PHKLSFLSTLQTCKSIKGLK---QIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRY 76

Query: 452 AYLLFERIQQKSVVMWNSMICGF-YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           A  L  +++  ++ ++N++I G    N +S+E + ++ QM    +  D  T    ++AC+
Sbjct: 77  ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 136

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
               + +G+ VH + I  G+  D+Y+   L  MYA C  +++A++VFD+  +R++VSW+ 
Sbjct: 137 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTT 196

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIF 629
           MI  Y   G   +   LF +M    ++ + +T + +L +C+  G +  G K +   +R  
Sbjct: 197 MIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNS 256

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            V  D+     +VD+  + GD   A K+   MP   N   W ++++G
Sbjct: 257 NVNLDVFVGNALVDMYLKCGDANFARKVFQEMPV-KNVVSWNSMISG 302


>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 688

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 207/672 (30%), Positives = 339/672 (50%), Gaps = 42/672 (6%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR C+++     G  +H  + K G   D  +  +++  Y EF  + DA KVFD+MT R++
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           V+W+++++++ D     E +++++ M +    P+     ++ +ACG +  L   + I   
Sbjct: 70  VTWTTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVGDLGLGKLIQER 128

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF--- 278
           +   K++ D  L NS + M+ KCG L  A   F  I +  TT+W  ++S Y+++G     
Sbjct: 129 IYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA 188

Query: 279 ---------------------------QKALESFVKMLEVK-EEPNLITLITVLGSCAGL 310
                                      Q+ALE FV M+  +  + +  T    L   A  
Sbjct: 189 EKLFHCMPHPNVVSWNSMIAGFADNGSQRALE-FVSMMHKRCIKLDDFTFPCALKISALH 247

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI------HAIGERNI 364
           G L  GK VH  + + G       L  ALI+ Y+ C  + E  K+       +A    N+
Sbjct: 248 GLLFIGKQVHSYVTKLGYESSCFTL-SALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
             WN ++S Y      + AL LL ++   G + DS++   +L  C N+ S ++GLQ+HG 
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366

Query: 425 VIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           ++    + D  V S L+D+Y+K    + A  +F R+ +K ++ W+ +I G  Q G +  A
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLA 426

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
            ++F  M     E+D     T ++ CSN+  L  GK VH   +  G   + +  T+L DM
Sbjct: 427 FSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDM 486

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCG+++ A  +F    E+++VSW+ +I   G +G+  +A   F +M+ SGI PNE+TF
Sbjct: 487 YSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITF 546

Query: 604 MNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + +L AC ++G VEE +  FN+M+ ++G+EP L+HY CMVDLL+  G  E A K+I +MP
Sbjct: 547 LGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMP 606

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
           F  N + W  LL  C       ++  +   L     ND   Y  LSN YA  G W    K
Sbjct: 607 FEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYVTLSNAYASLGMWHTLSK 666

Query: 723 VRSIMEVTGLKK 734
            R   +  G+KK
Sbjct: 667 AREASKKFGIKK 678



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 170/644 (26%), Positives = 299/644 (46%), Gaps = 56/644 (8%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            R C  +R   R   +HA+L   G   D   +  LI  YAE  ++R +  VFD   + + 
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  +       E+I LY+ M + + T + ++Y +VL+AC  +GDLG G+ +  R
Sbjct: 70  VTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGKLIQER 128

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I +     D ++  S++  + + G L+DA +VF  ++     +W+ I++ Y     + E 
Sbjct: 129 IYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA 188

Query: 181 LKMFHSMVREGVEP-----------------DFVTMLSLAEACGEL------CSLRPA-- 215
            K+FH M    V                   +FV+M+   + C +L      C+L+ +  
Sbjct: 189 EKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMH--KRCIKLDDFTFPCALKISAL 246

Query: 216 -------RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS---- 264
                  + +H +V +   +      ++ I MYS C DL+ A + F +      +     
Sbjct: 247 HGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306

Query: 265 --WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
             W +M+S Y  +   Q AL    ++       +  T    L  C  L   R G  +H  
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366

Query: 323 IIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           I+    G E DY +G  L++ YA+   + +   + H +  ++I++W+ LI   A+ G++ 
Sbjct: 367 IVT--CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNW 424

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLI 440
            A  +   M       D F +++ L  C N+ SL+ G Q+H   +K   + E F  +SL+
Sbjct: 425 LAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLL 484

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMYSKCG    A  LF   Q+K +V W  +I G  QNG + EA+  FH+M  + +  +E+
Sbjct: 485 DMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEI 544

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           TFL  + AC   G +E+ + + + + S YG+   +     + D+ A  G  + A+++  +
Sbjct: 545 TFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIAN 604

Query: 560 MS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK--PNE 600
           M  E N  +W  ++   G  G  ND   L  ++ D  ++  PN+
Sbjct: 605 MPFEPNQTTWRTLL---GACGTRND-TKLINRVADGLLEATPND 644



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 9/187 (4%)

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           MY+N +  D       ++ C+ +   ++G  +H  L  +G   D+++   L  MYA+  +
Sbjct: 1   MYVNIIAKD-------LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFN 53

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           ++ A++VFD M++RN+V+W+ M+  +   G+  +A  L+  M  S   PN   +  +L A
Sbjct: 54  VRDAEKVFDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKA 112

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           C   G +  GK     +    ++ D      ++D+  + G +  A ++ H++   A  + 
Sbjct: 113 CGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS-RATTTT 171

Query: 670 WGALLNG 676
           W  +++G
Sbjct: 172 WNIIVSG 178


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 227/745 (30%), Positives = 378/745 (50%), Gaps = 24/745 (3%)

Query: 16  LHAHLLVTGLHY--DPPASTRLIESYAE-MGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
           +  H L++   Y  D  AS  LI  Y   +G +  +R  FD+    +      +I  Y  
Sbjct: 196 MQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQ 255

Query: 73  NNFFEESILLYHKMIRE----QATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGF 126
                 +  ++  M +E        + + + S++ A  SL + G    E++  R+ K GF
Sbjct: 256 RGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGF 315

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             D  + ++++  + + G +  A+ +F KM+ R+VVS + +I          E +++F  
Sbjct: 316 LHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFME 375

Query: 187 MVREGVEPDFVTMLSLAEACGELCSL----RPARSIHGHVLRRKI-KIDGPLGNSFIVMY 241
           M ++ VE +  + + +  A  E   L    R    +H  ++R  +      +GN  I MY
Sbjct: 376 M-KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMY 434

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KCG +  A   F  ++ + + +W +MI+  +++  F +A+++F +M   +  P+  T+I
Sbjct: 435 AKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMI 494

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           + L SCA LGW+  G+ +HC+ ++ G+  +   +  AL+  Y ECG + EC+K    + +
Sbjct: 495 SALSSCASLGWISVGEQLHCEGLKLGLDLDVS-VSNALLALYGECGYVKECQKAFSLMLD 553

Query: 362 RNILSWNMLISEYARKGMSK-EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            + +SWN LI   A    S  EA+E  + M   G  P+  +  + L+A  ++   +LG Q
Sbjct: 554 YDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQ 613

Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNG 478
           IH  V+K +   D  ++++L+  Y KCG       +F R+  ++  V WNSMI G+  N 
Sbjct: 614 IHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNE 673

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              +A+++   M      +D  TF T + AC+ +  LE+G  VH   +   +  DI I +
Sbjct: 674 LLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGS 733

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMYAKCG +  A R F+ M  RN+ SW++MI  Y  HG    +  LF QM   G  P
Sbjct: 734 ALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLP 793

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           + VTF+ +L ACSH+G V EG  +F++M  I+G+ P ++H++CMVDLL R G++      
Sbjct: 794 DHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDF 853

Query: 658 IHSMPFPANGSIWGALLNG-CRIHKRIDVM--KTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           ++ MP   N  IW  +L   CR + R   +  +  E  L +  TN    Y LLSN+YA  
Sbjct: 854 LNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVN-YILLSNMYASG 912

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYS 739
           G WD+  K R  M    +KK  G S
Sbjct: 913 GKWDDVAKTRVAMRKAFVKKEAGCS 937



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 194/703 (27%), Positives = 336/703 (47%), Gaps = 38/703 (5%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           +R     +    LH  L   G   D      LI  YA +G L S R VFD     +   W
Sbjct: 83  YRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSW 142

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG--SGEKVHGRI 121
           + LI  Y  N    E+  L+ KM+ +    +++ + SV+RAC   G+ G   G ++HG +
Sbjct: 143 SCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLM 202

Query: 122 IKCGFDKDDVIQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            K  +  D      ++  YG   G +D AR+ FD +  R++VS +S+I+ Y    D    
Sbjct: 203 SKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSA 262

Query: 181 LKMFHSMVRE----GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL--- 233
             +F +M +E    G++P+  T  SL  A    CSL  +  +    L  +++  G L   
Sbjct: 263 FDIFSTMQKEVMGDGLKPNEYTFGSLISAT---CSLANSGLVLLEQLLTRVEKSGFLHDL 319

Query: 234 --GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE- 290
             G++ +  ++K G +  A+  F K+  R   S   +I    R    ++A+E F++M + 
Sbjct: 320 YVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS 379

Query: 291 VKEEPNLITLITVLGSCAGLGWL----REGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           V+  PN  + + +L +      L    R+G  VH  +IR G+      +G  LI  YA+C
Sbjct: 380 VELNPN--SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G +++   V   +  ++ ++WN +I+   +     EA++   +M+   L P +F++ S+L
Sbjct: 438 GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISAL 497

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           S+C ++G + +G Q+H   +K+    D  V ++L+ +Y +CG+       F  +     V
Sbjct: 498 SSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHV 557

Query: 466 MWNSMICGFYQNGNS-LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
            WNS+I     +  S LEA+  F  M     + + VTF+T + A S++   E GK +H  
Sbjct: 558 SWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHAL 617

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLND 583
           ++   V  D  I+ AL   Y KCGD+   + +F  MS+R + VSW++MI  Y  +  L  
Sbjct: 618 VLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPK 677

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG------VEPDLQH 637
           A  +   M+  G + +  TF  +L AC+   ++E G      M + G      +E D+  
Sbjct: 678 AMDMVWFMMQKGQRLDGFTFATVLSACATVATLERG------MEVHGCSVRACLESDIVI 731

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            + +VD+ ++ G I+ A +    MP   N   W ++++G   H
Sbjct: 732 GSALVDMYAKCGRIDYASRFFEMMP-ARNLYSWNSMISGYARH 773



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 170/593 (28%), Positives = 286/593 (48%), Gaps = 39/593 (6%)

Query: 50  LVFDTFKEP---DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS 106
           L+F+ F  P    S    VL+  Y       +S  L+H  ++    I + +      +C 
Sbjct: 37  LLFNPFTNPLPPSSIPLQVLVDLY-------KSSQLHHNPVQHDEKIES-LAQRYRYSCG 88

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           S       E++H ++ K GF  D  +  +++  Y   G L   RKVFD+M  R++VSWS 
Sbjct: 89  S----KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSC 144

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGHVL 223
           +I+ Y  N   +E  ++F  MV +G  P+   F +++   + CGE   L+    IHG + 
Sbjct: 145 LISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEY-GLKFGMQIHGLMS 203

Query: 224 RRKIKIDGPLGNSFIVMYSKC-GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
           + +   D    N  I MY    G +  A R F  I  R   S  +MIS Y + G    A 
Sbjct: 204 KTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAF 263

Query: 283 ESFVKML-EVKEE---PNLITLITVLGSCAGLGWLREGKSVHCQIIRK--GMGPEYD-YL 335
           + F  M  EV  +   PN  T  +++ +   L     G  +  Q++ +    G  +D Y+
Sbjct: 264 DIFSTMQKEVMGDGLKPNEYTFGSLISATCSLA--NSGLVLLEQLLTRVEKSGFLHDLYV 321

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWG 394
           G AL+  +A+ G +   + +   +  RN++S N LI    R+   +EA+EL ++M+ +  
Sbjct: 322 GSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVE 381

Query: 395 LMPDSFSVASSLSACGNVGSLQ----LGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGF 448
           L P+S+ +   L+A      L+     G ++H  +I+    +  +   + LI+MY+KCG 
Sbjct: 382 LNPNSYMII--LTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGA 439

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            N A ++F  +  K  V WNSMI G  QN   LEA+  F +M    L     T ++A+ +
Sbjct: 440 INDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSS 499

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+++G +  G+ +H + +  G+  D+ +  AL  +Y +CG ++  Q+ F  M + + VSW
Sbjct: 500 CASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSW 559

Query: 569 SAMIDCYG-MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           +++I         + +A   F  M+ +G  PN VTF+ IL A S     E GK
Sbjct: 560 NSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGK 612


>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 591

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 179/484 (36%), Positives = 278/484 (57%), Gaps = 3/484 (0%)

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
           C +   A+I   +R+      +E   +ML V  EP+  T+  VL + A +  +REG+ +H
Sbjct: 74  CLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIH 133

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            + I+ GM     Y+   L+  Y+ CG + + +KV      R+++SW  LI  + + G+ 
Sbjct: 134 ARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLY 193

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCK-DEFVQSS 438
             A+E  ++M    L  D  ++   LSAC N+G L LG ++H ++   ID K D FV ++
Sbjct: 194 SRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNA 253

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+DMY KC   N AY +F+ +  K+VV WN+MI G    G   EA++ F  M    ++ D
Sbjct: 254 LLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPD 313

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           EVT +  + +C+N+G LE GKWVH  +    +  D ++  AL DMYAKCG +  A RVF+
Sbjct: 314 EVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFE 373

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           SM  R+V S++AMI    +HG+ N A  +F +M   GI+PNEVTF+ +L ACSH G V E
Sbjct: 374 SMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAE 433

Query: 619 GKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           GK YF  M   + + P  +HY CM+DLL R+G ++ A ++IH M    +    GALL  C
Sbjct: 434 GKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGAC 493

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
           RIH  +D+ +++ ++L+    ++ G Y L++N+Y+    W +  K+R  M+   ++K PG
Sbjct: 494 RIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPG 553

Query: 738 YSTI 741
            S I
Sbjct: 554 CSLI 557



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 243/441 (55%), Gaps = 8/441 (1%)

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
           ++II S   N+     ++  + M+  G+EPD  T+  + +A   +  +R  + IH   ++
Sbjct: 79  NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138

Query: 225 R-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
              +  +  + N+ + +YS CG +   ++ F +   R   SWT +I  + ++G + +A+E
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEF 342
           +F++M +++   +  TL+ VL +C+ LG L  G+ VH   IR  +  + D ++G AL++ 
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVH-SYIRHYIDMKADVFVGNALLDM 257

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           Y +C  ++   KV   +  +N+++WN +IS  A +G  +EAL+    MQ  G+ PD  ++
Sbjct: 258 YLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTL 317

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
              L++C N+G L++G  +H ++ +     D+FV ++L+DMY+KCG  + A+ +FE +++
Sbjct: 318 VGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKR 377

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           + V  + +MI G   +G +  A  +F +M+   +E +EVTFL  + ACS+ G + +GK  
Sbjct: 378 RDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKY 437

Query: 522 HHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHG 579
             ++   Y +R        + D+  + G ++ A+ +   M  R +V +  A++    +HG
Sbjct: 438 FFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHG 497

Query: 580 QLNDAASLFKQMLDSGIKPNE 600
            ++   S+ +++ +  + P+E
Sbjct: 498 NVDIGESVMQKLTE--LDPDE 516



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 205/438 (46%), Gaps = 38/438 (8%)

Query: 10  LRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +R+  ++HA  + TG+  ++   S  L+  Y+  GS+   + VFD     D   W  LI+
Sbjct: 126 IREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQ 185

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +     +  ++  + +M   +          VL ACS+LGDL  G+KVH  I      K
Sbjct: 186 AFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMK 245

Query: 129 DDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            DV +  ++L  Y +   L+ A KVFD+M  ++VV+W+++I+         E L  F  M
Sbjct: 246 ADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMM 305

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             +GV+PD VT++ +  +C  L  L   + +H ++ R  I  D  +GN+ + MY+KCG +
Sbjct: 306 QDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSI 365

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A R F  +++R   S+TAMI      G    A + F +M  V  EPN +T + +L +C
Sbjct: 366 DEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMAC 425

Query: 308 AGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           +  G + EGK    Q+  K  + P+ ++ G  +I+     G + E E++IH +  R    
Sbjct: 426 SHGGLVAEGKKYFFQMSDKYKLRPQAEHYG-CMIDLLGRAGLVKEAEEIIHKMEIR---- 480

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
                                         PD F+  + L AC   G++ +G  +   + 
Sbjct: 481 ------------------------------PDVFACGALLGACRIHGNVDIGESVMQKLT 510

Query: 427 KIDCKDEFVQSSLIDMYS 444
           ++D  +E     + ++YS
Sbjct: 511 ELDPDEEGTYILMTNLYS 528


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 199/651 (30%), Positives = 339/651 (52%), Gaps = 9/651 (1%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           N++YP     C  +   G  E+   R     +  +     S L    + G + +AR +F+
Sbjct: 52  NYVYPGTATECRDMIWQGKPEQ---RAPTAYYVPNMPELNSQLKQLMKLGKICEARDMFN 108

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPD-FVTMLSLAEACGELCSL 212
           KM+ RD +SW+++IA Y + A+ +E L +F +M V  G++ D FV  ++L +AC    ++
Sbjct: 109 KMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVAL-KACALGMNV 167

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                +HG  ++  +     + ++ + MY K G        F  +  R   SWTA+I   
Sbjct: 168 YFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGL 227

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
             +G     L  F +M   K   +  T    L + A  G L  GK++H Q I++G   E 
Sbjct: 228 VHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFN-ET 286

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            Y+   L   Y++C K     ++   +   +++SW  LI  Y + G  + AL+   +M+ 
Sbjct: 287 AYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRK 346

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL 451
             + P+ ++ AS +SAC N+   + G QIHGH +++   D   V +S+I +YSKCG    
Sbjct: 347 SDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQE 406

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A L+F+ + +K ++ W+++I  + Q  ++ EA N    M     + +E    + +  C +
Sbjct: 407 ASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGS 466

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  LE GK VH   +  G+  +  + +AL  MY++ G+LQ A ++FDS+   ++VSW+AM
Sbjct: 467 MALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAM 526

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
           I+ Y  HG   +A SLF+ +   G+ P+ VTF+ IL AC+H+G V+ G +Y+  M   + 
Sbjct: 527 INGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQ 586

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           + P  +HY C++DLL R+G +  A  M+ +MPFP +  +W  LL  CR H  +D      
Sbjct: 587 IAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAA 646

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +++     N  G +  L+NIY+  G  +E   VR +M+  G+ K PG+S I
Sbjct: 647 EQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWI 697



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 176/621 (28%), Positives = 298/621 (47%), Gaps = 20/621 (3%)

Query: 26  HYDP--PASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           +Y P  P     ++   ++G +  +R +F+     D   W  LI  Y+      E+++L+
Sbjct: 79  YYVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILF 138

Query: 84  HKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
             M +        F+    L+AC+   ++  GE +HG  +K G      + ++++  Y +
Sbjct: 139 SNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMK 198

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G  +    VF+ MT+R+VVSW+++I          +GL  F  M R  V  D  T    
Sbjct: 199 VGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVA 258

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            +A  E   L   ++IH   +++       + N+   MYSKC       R F K+     
Sbjct: 259 LKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDV 318

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SWT +I  Y + G  ++AL++F +M +    PN  T  +V+ +CA L   + G+ +H  
Sbjct: 319 VSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGH 378

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            +R G+      +  ++I  Y++CG + E   V   +  ++I+SW+ +IS Y +   +KE
Sbjct: 379 ALRLGLVDALS-VSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKE 437

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLID 441
           A   L  M   G  P+ F++AS LS CG++  L+ G Q+H + + I    E  V S+LI 
Sbjct: 438 AFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALIS 497

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MYS+ G    A  +F+ I+   +V W +MI G+ ++G S EAI+LF  +    L  D VT
Sbjct: 498 MYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVT 557

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           F+  + AC++ G ++ G + ++KL++  Y +         + D+  + G L  A+ +  +
Sbjct: 558 FIGILTACNHAGLVDLG-FYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRN 616

Query: 560 MS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN----EVTFMNILWACSHSG 614
           M    + V WS ++     HG L+ A    +QML   + PN     +T  NI    S SG
Sbjct: 617 MPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLR--LHPNSAGAHITLANIY---SASG 671

Query: 615 SVEEGKFYFNAMRIFGV--EP 633
             EE       M+  GV  EP
Sbjct: 672 RREEAAHVRKLMKSKGVIKEP 692



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 236/551 (42%), Gaps = 34/551 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   + +GL      S+ L++ Y ++G       VF+     +   W  +I   +    
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGC 232

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             + +  + +M R +    +  +   L+A +  G L  G+ +H + IK GF++   +  +
Sbjct: 233 SLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNT 292

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y +    D   ++F KM++ DVVSW+++I +Y    D    L  F  M +  V P+
Sbjct: 293 LGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPN 352

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+  AC  L   +    IHGH LR  +     + NS I +YSKCG L  A   F 
Sbjct: 353 EYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFD 412

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + ++   SW+ +IS Y +    ++A      M     +PN   L +VL  C  +  L  
Sbjct: 413 GMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEP 472

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK VH   +  G+  E   +  ALI  Y+  G + E  K+  +I   +I+SW  +I+ YA
Sbjct: 473 GKQVHAYALCIGLDHE-TMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYA 531

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
             G S+EA+ L   + + GLMPD  +    L+AC + G                      
Sbjct: 532 EHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAG---------------------- 569

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
              L+D+    GF     +  E     S   +  +I    + G   EA ++   M   C 
Sbjct: 570 ---LVDL----GFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPC- 621

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D+V + T ++AC + G L++  W   +++             L ++Y+  G  + A  
Sbjct: 622 --DDVVWSTLLRACRDHGDLDRAIWAAEQMLRLH-PNSAGAHITLANIYSASGRREEAAH 678

Query: 556 VFDSMSERNVV 566
           V   M  + V+
Sbjct: 679 VRKLMKSKGVI 689



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C NL       ++H H L  GL      S  +I  Y++ G L+ + LVFD     D
Sbjct: 359 VISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKD 418

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y   +  +E+      M RE    + F   SVL  C S+  L  G++VH 
Sbjct: 419 IISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHA 478

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +  G D + ++ ++++  Y   G L +A K+FD + + D+VSW+++I  Y ++    E
Sbjct: 479 YALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQE 538

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            + +F ++   G+ PD+VT + +  AC
Sbjct: 539 AISLFENISSVGLMPDYVTFIGILTAC 565


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 178/510 (34%), Positives = 302/510 (59%), Gaps = 7/510 (1%)

Query: 236 SFIVMYSKCGDLLSAERTFV--KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           S    Y++ G L +AE T       + C  +W A+++  +R+G    AL  F + L    
Sbjct: 49  SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVF-RALPSSA 107

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            P+  T    L +CA LG L   ++V  +    G G +  ++  AL+  Y+ CG M +  
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDV-FVCSALLHVYSRCGAMGDAI 166

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V   +  ++ ++W+ +++ +   G   EAL +  +M+  G+  D   +   + AC   G
Sbjct: 167 RVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTG 226

Query: 414 SLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           + ++G  +HG  ++   + D  + +SL+DMY+K G  ++A  +F  +  ++ V WN++I 
Sbjct: 227 NTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALIS 286

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           GF QNG++ EA++LF +M  + L+ D    ++A+ AC+++G L+ GK +H   I   +  
Sbjct: 287 GFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIH-GFILRRLEF 345

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
              + TA+ DMY+KCG L++A+++F+ +S R++V W+AMI C G HG  +DA +LF+++ 
Sbjct: 346 QCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELN 405

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDI 651
           ++GIKP+  TF ++L A SHSG VEEGKF+F+ M   FG+EP  +H  C+VDLL+RSG +
Sbjct: 406 ETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLV 465

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
           E A +M+ SM       IW ALL+GC  +K++++ +TI K++  +   D G   L+SN+Y
Sbjct: 466 EEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLY 525

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A    WD+  ++R +M+ +G KKVPGYS I
Sbjct: 526 AAAKKWDKVREIRKLMKDSGSKKVPGYSLI 555



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 22/420 (5%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           T +  LTRLHA L+V+      P+   L  +YA +G+L ++           S + A   
Sbjct: 26  TTVAALTRLHALLVVSSSQNLFPS---LAAAYARVGALDAAESTLAASPSSRSCIPA--- 79

Query: 68  KCYMWNNFFEE--------SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
               WN             + L   + +   A   +  +   L AC+ LGDL + E V  
Sbjct: 80  ----WNALLAARSRAGSPGAALRVFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRV 135

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R    G+ +D  + +++L  Y   G + DA +VFD M  +D V+WS+++A +       E
Sbjct: 136 RAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVE 195

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L M+  M   GV  D V M+ + +AC    + R   S+HG  LR  +++D  +  S + 
Sbjct: 196 ALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVD 255

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K G    A + F  +  R   SW A+IS + ++G   +AL+ F +M     +P+   
Sbjct: 256 MYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGA 315

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA 358
           L++ L +CA +G+L+ GKS+H  I+R+    E+   LG A+++ Y++CG +    K+ + 
Sbjct: 316 LVSALLACADVGFLKLGKSIHGFILRR---LEFQCILGTAVLDMYSKCGSLESARKLFNK 372

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R+++ WN +I+     G   +AL L  ++   G+ PD  + AS LSA  + G ++ G
Sbjct: 373 LSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEG 432



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 197/397 (49%), Gaps = 22/397 (5%)

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERN--ILSWNMLISEYARKGMSKEALELLVQMQT 392
           L P+L   YA  G +   E  + A       I +WN L++  +R G    AL +   + +
Sbjct: 46  LFPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPS 105

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNL 451
               PDS +   +L+AC  +G L     +          +D FV S+L+ +YS+CG    
Sbjct: 106 -SARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGD 164

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F+ + +K  V W++M+ GF   G  +EA+ ++ +M  + +  DEV  +  IQAC+ 
Sbjct: 165 AIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTL 224

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
            G    G  VH + + +G+R D+ I T+L DMYAK G    A++VF  M  RN VSW+A+
Sbjct: 225 TGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNAL 284

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I  +  +G  ++A  LF++M  SG++P+    ++ L AC+  G ++ GK       I G 
Sbjct: 285 ISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGK------SIHGF 338

Query: 632 EPDLQHYACM-----VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
                 + C+     +D+ S+ G +E A K+ + +    +  +W A++  C  H      
Sbjct: 339 ILRRLEFQCILGTAVLDMYSKCGSLESARKLFNKLS-SRDLVLWNAMIACCGTHGCGHDA 397

Query: 687 KTIEKELSVTGTNDN--GYYTLLSNI----YAEEGNW 717
             + +EL+ TG   +   + +LLS +      EEG +
Sbjct: 398 LALFQELNETGIKPDHATFASLLSALSHSGLVEEGKF 434



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 37/411 (9%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y+  G++  +  VFD     D   W+ ++  ++      E++ +Y +M        
Sbjct: 152 LLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAED 211

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
             +   V++AC+  G+   G  VHGR ++ G   D VI TS++  Y + G  D AR+VF 
Sbjct: 212 EVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFR 271

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            M  R+ VSW+++I+ +  N    E L +F  M   G++PD   ++S   AC ++  L+ 
Sbjct: 272 MMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKL 331

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            +SIHG +LRR ++    LG + + MYSKCG L SA + F K+  R    W AMI+C   
Sbjct: 332 GKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGT 390

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYD 333
            G    AL  F ++ E   +P+  T  ++L + +  G + EGK    ++I + G+ P   
Sbjct: 391 HGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEP--- 447

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
                  E +  C                       ++   AR G+ +EA E+L  M T 
Sbjct: 448 ------TEKHCVC-----------------------VVDLLARSGLVEEANEMLASMHTE 478

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYS 444
             +P   ++   LS C N   L+LG  I   +++   +D  V + + ++Y+
Sbjct: 479 PTIPIWVAL---LSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYA 526


>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
 gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
          Length = 846

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/665 (29%), Positives = 345/665 (51%), Gaps = 19/665 (2%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFK----EPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           ST +I++YA+ G +  +  +F+  +    +PD   W  ++  Y       E++LL+ KM 
Sbjct: 140 STAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLGHAREALLLFRKMD 199

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
            +      F + + + ACSS+  L  G  +H R++    + D V+  ++L  Y + G + 
Sbjct: 200 LQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVH 259

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVT--MLSLAEA 205
           ++R +F  M  ++VV+WS+I+A+Y  N      +++F  M+ +G+ P+ VT  +L + EA
Sbjct: 260 ESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAPNKVTIALLRIVEA 319

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV-MYSKCGDLLSAERTFVKIEKRCTTS 264
           C +  +L  AR +H             +  + +V MY +CG +  A+  F +++ R  TS
Sbjct: 320 CDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITS 379

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           W AM+  Y+ +    +AL  F  ML   E  +P+ IT ++   +C  +G L     +H +
Sbjct: 380 WNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSR 439

Query: 323 IIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           I +     + D  LG ALI+ Y  C  ++   +V+  +   N++SW  +I    +   ++
Sbjct: 440 ISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWTSMILACEQNEDNE 499

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLI 440
            A+ +   MQ  G  PD  ++ + + A  N+  L+ G++ H             V ++L+
Sbjct: 500 AAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALV 559

Query: 441 DMYSKCGFKNLAYLLFERIQQKSV---VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
            +Y   G    A  +F+ + Q+SV   V WNSM+  + QNG   +A+  F +M  +    
Sbjct: 560 TLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHP 619

Query: 498 DEVTFLTAIQACS-NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           D+ TF+  + AC+ +  +L +   +H    + G+  D  +   L  MY++CG+L  A++V
Sbjct: 620 DKTTFVNILNACAGDPSKLLQAVKIHALAAACGLDSDTDVANTLLHMYSRCGNLSRARKV 679

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           F +++++NVVSWSAM      +G  + A   F+ ML  GI+PN VTF++IL  CSH+G +
Sbjct: 680 FHAITQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLM 739

Query: 617 EEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           +E   Y  AM     ++P +QHYAC++DLL+R+G    A ++   +P P     W +LL 
Sbjct: 740 DEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLPNPV---AWNSLLG 796

Query: 676 GCRIH 680
            C +H
Sbjct: 797 ACLVH 801



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 187/698 (26%), Positives = 343/698 (49%), Gaps = 22/698 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L     NL     +H  ++ +G H D      LI+ Y    S+  +  VF T    + 
Sbjct: 2   LKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNV 61

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD--LGSGEKVH 118
           F W +LI  +  N  F E++ L+ +M         F + ++L ACS+LG   L  G+ +H
Sbjct: 62  FTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIH 121

Query: 119 GRIIKCGF----DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR----DVVSWSSIIAS 170
            RI + G     +   +  T+++  Y + G ++ A ++F++M  +    D+++W++++ +
Sbjct: 122 SRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTA 181

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           Y       E L +F  M  +G+EPD    ++  +AC  + SL     +H  +L   ++ D
Sbjct: 182 YNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECD 241

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
           G +GN+ +  Y+K G +  +   F  ++ +   +W+A+++ Y ++G  + A+E F +ML 
Sbjct: 242 GVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLL 301

Query: 291 VKEEPNLIT--LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
               PN +T  L+ ++ +C     L + + +H +            +  AL+  Y  CG 
Sbjct: 302 DGIAPNKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGS 361

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASSL 406
           +S+ + V   +  RNI SWN ++  Y+    S EAL     M  +  G+ PD+ +  S+ 
Sbjct: 362 VSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAA 421

Query: 407 SACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            ACG +G L   ++IH  + +    +  D  + S+LI MY  C     A  + + + + +
Sbjct: 422 DACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTN 481

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           V+ W SMI    QN ++  AI+++  M L+  + D VT +T I+A +N+  L++G   H 
Sbjct: 482 VISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHA 541

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM---SERNVVSWSAMIDCYGMHGQ 580
           +  ++G      +  AL  +Y   GDLQ A+ VF  +   S  +VV+W++M+  +  +G 
Sbjct: 542 QAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGL 601

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF-GVEPDLQHYA 639
            N A   F++ML  G  P++ TF+NIL AC+   S        +A+    G++ D     
Sbjct: 602 PNQALRTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQAVKIHALAAACGLDSDTDVAN 661

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
            ++ + SR G++  A K+ H++    N   W A+   C
Sbjct: 662 TLLHMYSRCGNLSRARKVFHAIT-QKNVVSWSAMAAAC 698


>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
          Length = 1925

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 221/728 (30%), Positives = 371/728 (50%), Gaps = 49/728 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA  L  G+  D   ++ LI  YA    L SSR+VFD     D   +  +I  YM ++ 
Sbjct: 262 LHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHI 321

Query: 76  FEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           ++E+  ++ +++   A   N +   SVL +CS    +  GE VHG IIK G  +   + +
Sbjct: 322 WKEAFEIF-RLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMIIKLGLAEHVSVAS 380

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + G LD +  +F                                      V P
Sbjct: 381 ALVSMYSKLGKLDSSLLLFCCC-----------------------------------VAP 405

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T++++   C     L  A+SIH + +R K +    + N+ + MY+ C D+ ++   F
Sbjct: 406 DATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLF 465

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            K+E R   SW  MIS +   G     L  F +M   + + +L+TLI ++ S +  G   
Sbjct: 466 QKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAI 525

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+SVH   I+ G   +   L  ALI  YA CG +   +++  +   RN +++N L+S Y
Sbjct: 526 VGESVHSLAIKSGCNSDVS-LTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGY 584

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            +  +S + L L  QM      P+  ++ + L  C +   LQ G  IH + ++   + E 
Sbjct: 585 RKNNISAKILPLFYQMVENDEKPNLVTLLNLLPVCQS--QLQ-GKCIHSYAVRNFTRLET 641

Query: 435 -VQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSLEAINLF-HQM 490
            + +S + MYS+  F N+ Y   +F  I  +++++WN+ +    Q   +   ++ F H +
Sbjct: 642 PLFTSAMGMYSR--FNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFKHML 699

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
           +LN +  D VT L  I ACS +G       +   ++  G   +I +  AL D +++CG +
Sbjct: 700 FLN-VRPDAVTMLALISACSQLGNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCGSI 758

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ +FDS  E++ V+W AMI+ Y MHG    A  LF  M+DSG+ P+++TF++IL AC
Sbjct: 759 SLARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSAC 818

Query: 611 SHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           +H+G VE+G+  F +++  +G+ P ++HYACMVDLL R+G ++ A+ ++ SMPF  + ++
Sbjct: 819 AHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDLLGRTGHLDEAYDVVRSMPFRPSDNL 878

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
             +LL  CR H    + ++I K L  +    +  Y +LSNIYA  G W +  ++R  ME 
Sbjct: 879 LESLLGACRFHGNYKIGESIGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEA 938

Query: 730 TGLKKVPG 737
            GL+K  G
Sbjct: 939 KGLRKNVG 946



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 195/689 (28%), Positives = 347/689 (50%), Gaps = 49/689 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVF-DTFK-EPDS 60
           L R   +L+ L  LHAHL V G   D    T L+E Y   G   S+ L+F +T++  P  
Sbjct: 47  LLRDAYSLKCLRELHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAV 106

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           +   + ++C+  + F  E + LY ++    +   NF +P V+RAC+++  L  G ++H R
Sbjct: 107 YSLNLAVRCFSDHGFHRELLHLYRELCCFGS--DNFTFPPVIRACTAVSCLRLGREMHCR 164

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ G   +  +QT++L  Y + G +D +R+VFD M  RD++SW+++++ Y  N    E 
Sbjct: 165 VLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREA 224

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++M   M + G+ P+  T + +   CG +       S+H   L+  +  D  L ++ I M
Sbjct: 225 VEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDESLTSALITM 284

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+   DL S+   F     +   S+ +MIS Y +   +++A E F  M  V   PNL+T+
Sbjct: 285 YAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTV 344

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++VL SC+    +  G+SVH  II+ G+  E+  +  AL+  Y++ GK+           
Sbjct: 345 VSVLPSCSDFFGINHGESVHGMIIKLGLA-EHVSVASALVSMYSKLGKL----------- 392

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           + ++L +   ++                        PD+ ++ + +S C     L +   
Sbjct: 393 DSSLLLFCCCVA------------------------PDATTIMNVISGCRYTKDLHMAKS 428

Query: 421 IHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           IH + ++   +    V ++L+ MY+ C   + ++ LF++++ + ++ WN+MI GF + G+
Sbjct: 429 IHAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIGD 488

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
           S   + LF QM+   ++ D VT +  I + S  G    G+ VH   I  G   D+ +  A
Sbjct: 489 SDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNA 548

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L  MYA CG ++  Q++FDS   RN ++++A++  Y  +        LF QM+++  KPN
Sbjct: 549 LITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPN 608

Query: 600 EVTFMNILWACSHSGSVEEGK-FYFNAMRIFG-VEPDLQHYACMVDLLSRSGDIEGAFKM 657
            VT +N+L  C    S  +GK  +  A+R F  +E  L  +   + + SR  +IE   K 
Sbjct: 609 LVTLLNLLPVCQ---SQLQGKCIHSYAVRNFTRLETPL--FTSAMGMYSRFNNIEYCSK- 662

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           I S+    N  +W A L+ C   K+ D++
Sbjct: 663 IFSLIGARNLIVWNAFLSACVQCKQADMV 691



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 176/692 (25%), Positives = 314/692 (45%), Gaps = 62/692 (8%)

Query: 2   PLFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           P+ R+CT    LR    +H  +L TG   +    T L++ YA+ G +  SR VFD     
Sbjct: 144 PVIRACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLR 203

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  ++  Y  N  F E++ +  +M +     +   +  ++  C S+GD   G+ +H
Sbjct: 204 DLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVGDSLH 263

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +K G   D+ + ++++  Y  F  L  +R VFD    +D+VS++S+I++Y  +    
Sbjct: 264 AFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHIWK 323

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E  ++F  M    V P+ VT++S+  +C +   +    S+HG +++  +     + ++ +
Sbjct: 324 EAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMIIKLGLAEHVSVASALV 383

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSK G L S+   F      C  +                              P+  
Sbjct: 384 SMYSKLGKLDSSLLLFC-----CCVA------------------------------PDAT 408

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T++ V+  C     L   KS+H   +R      Y  +  AL+  YA+C  +S    +   
Sbjct: 409 TIMNVISGCRYTKDLHMAKSIHAYAVRNKF-ESYHSVMNALLAMYADCRDISTSHTLFQK 467

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R ++SWN +IS +A  G S   L L  QM    +  D  ++   +S+    G   +G
Sbjct: 468 MEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVG 527

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +H   IK  C  D  + ++LI MY+ CG       LF+    ++ + +N+++ G+ +N
Sbjct: 528 ESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKN 587

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
             S + + LF+QM  N  + + VT L  +  C +  QL+ GK +H    SY VR    ++
Sbjct: 588 NISAKILPLFYQMVENDEKPNLVTLLNLLPVCQS--QLQ-GKCIH----SYAVRNFTRLE 640

Query: 538 TAL----TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           T L      MY++  +++   ++F  +  RN++ W+A +       Q +     FK ML 
Sbjct: 641 TPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFKHMLF 700

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNA--MRIF---GVEPDLQHYACMVDLLSRS 648
             ++P+ VT + ++ ACS  G+      YF A  M +    G   ++     ++D  SR 
Sbjct: 701 LNVRPDAVTMLALISACSQLGNA-----YFAACIMAVILQKGFSTNILVLNALIDTHSRC 755

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           G I  A ++  S     +   WGA++N   +H
Sbjct: 756 GSISLARELFDS-SVEKDSVTWGAMINAYSMH 786



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 192/414 (46%), Gaps = 4/414 (0%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           R   +L     +HA+ +             L+  YA+   + +S  +F   +      W 
Sbjct: 418 RYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWN 477

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
            +I  +      +  ++L+ +M  E+          ++ + S  GD   GE VH   IK 
Sbjct: 478 TMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKS 537

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           G + D  +  +++  Y   G ++  +++FD   SR+ ++++++++ Y  N   ++ L +F
Sbjct: 538 GCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLF 597

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           + MV    +P+ VT+L+L   C    S    + IH + +R   +++ PL  S + MYS+ 
Sbjct: 598 YQMVENDEKPNLVTLLNLLPVCQ---SQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRF 654

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
            ++    + F  I  R    W A +S   +       ++ F  ML +   P+ +T++ ++
Sbjct: 655 NNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFKHMLFLNVRPDAVTMLALI 714

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C+ LG       +   I++KG       L  ALI+ ++ CG +S   ++  +  E++ 
Sbjct: 715 SACSQLGNAYFAACIMAVILQKGFSTNILVLN-ALIDTHSRCGSISLARELFDSSVEKDS 773

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           ++W  +I+ Y+  G  + AL+L   M   G+ PD  +  S LSAC + G ++ G
Sbjct: 774 VTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACAHNGLVEQG 827



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 198/411 (48%), Gaps = 12/411 (2%)

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
           +SF       E   L  L  +L     L  LRE   +H  +   G   +  ++   L+E 
Sbjct: 27  KSFASSSPTSETTPLKVLTGLLRDAYSLKCLRE---LHAHLAVAG-AIQDTFVVTGLVER 82

Query: 343 YAECGKMSECEKVIHAIGERN---ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           Y   GK +    ++ A   R+   + S N+ +  ++  G  +E L L  ++  +G   D+
Sbjct: 83  YVYFGKAASA-ALLFAETYRSRPAVYSLNLAVRCFSDHGFHRELLHLYRELCCFG--SDN 139

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFER 458
           F+    + AC  V  L+LG ++H  V++        VQ++L+D+Y+K G  +++  +F+ 
Sbjct: 140 FTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDC 199

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  + ++ WN+M+ G+  N    EA+ +  +M    +  +  TF+  +  C ++G  + G
Sbjct: 200 MVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVG 259

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
             +H   +  GV  D  + +AL  MYA   DL +++ VFD    +++VS+++MI  Y  H
Sbjct: 260 DSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQH 319

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY 638
               +A  +F+ M    ++PN VT +++L +CS    +  G+     +   G+   +   
Sbjct: 320 HIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMIIKLGLAEHVSVA 379

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
           + +V + S+ G ++ +  +      P   +I   +++GCR  K + + K+I
Sbjct: 380 SALVSMYSKLGKLDSSLLLFCCCVAPDATTIMN-VISGCRYTKDLHMAKSI 429


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/540 (34%), Positives = 296/540 (54%), Gaps = 34/540 (6%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKE 293
           N+ ++ YSK G L   ERTF K+  R   +W  +I  Y+ SG    A++++  M+ +   
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
               +TL+T+L   +  G +  GK +H Q+I+ G    Y  +G  L++ Y++ G +S+ +
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF-ESYLLVGSPLLDMYSKVGCISDAK 191

Query: 354 KVIHAIGERNIL------------------------------SWNMLISEYARKGMSKEA 383
           KV + + +RN +                              SW+ +I   A+ GM KEA
Sbjct: 192 KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEA 251

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDM 442
           +E   +M+  GL  D +   S L ACG +G++  G QIH  +I+ + +D  +V S+LIDM
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDM 311

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y KC   + A  +F+R++QK+VV W +M+ G+ Q G + EA+ +F  M  + ++ D  T 
Sbjct: 312 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTL 371

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
             AI AC+NI  LE+G   H K I+ G+   I +  +L  +Y KCGD+  + R+F+ M+ 
Sbjct: 372 GQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNV 431

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           R+ VSW+AM+  Y   G+  +A  LF +M+  G+KP+ VT   ++ ACS +G VE+G+ Y
Sbjct: 432 RDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRY 491

Query: 623 FNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
           F  M   +G+ P   HY+CM+DL SRSG IE A   I+ MPF  +   W  LL+ CR   
Sbjct: 492 FELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKG 551

Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +++ K   + L     +    YTLLS+IYA +G WD   ++R  M+   ++K PG S I
Sbjct: 552 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWI 611



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 153/617 (24%), Positives = 281/617 (45%), Gaps = 91/617 (14%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATI 93
           L+ +Y++ G L      F+   + D   W VLI+ Y  +     ++  Y+ M+++  + +
Sbjct: 75  LLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNL 134

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           +     ++L+  SS G +  G+++HG++IK GF+   ++ + +L  Y + GC+ DA+KVF
Sbjct: 135 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVF 194

Query: 154 ----DKMT--------------------------SRDVVSWSSIIASYFDNADVSEGLKM 183
               D+ T                           +D VSWS++I     N    E ++ 
Sbjct: 195 YGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIEC 254

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M  EG++ D     S+  ACG L ++   R IH  ++R  ++    +G++ I MY K
Sbjct: 255 FREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCK 314

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           C  L  A+  F +++++   SWTAM+  Y ++G   +A++ F+ M     +P+  TL   
Sbjct: 315 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQA 374

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           + +CA +  L EG   H + I  G+   Y  +  +L+  Y +CG + +  ++ + +  R+
Sbjct: 375 ISACANISSLEEGSQFHGKAITAGL-IHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 433

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG----- 418
            +SW  ++S YA+ G + EA++L  +M   GL PD  ++   +SAC   G ++ G     
Sbjct: 434 EVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFE 493

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           L I+ + I +     +  S +ID++S+ G          RI+                  
Sbjct: 494 LMINEYGI-VPSNGHY--SCMIDLFSRSG----------RIE------------------ 522

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA+   + M       D + + T + AC N G LE GKW    LI           T
Sbjct: 523 ---EAMGFINGM---PFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY-T 575

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNV--------VSWSAMIDCYGMHGQLNDAAS---- 586
            L+ +YA  G      ++   M E+NV        + W   +  +    + +  +     
Sbjct: 576 LLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYA 635

Query: 587 ----LFKQMLDSGIKPN 599
               L+++++D+G KP+
Sbjct: 636 KLEELYQKIIDNGYKPD 652



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 153/604 (25%), Positives = 284/604 (47%), Gaps = 100/604 (16%)

Query: 81  LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ-TSILCT 139
           +++  +IR       F++ +++ A + +        ++ R +  G  + ++    ++L  
Sbjct: 24  MIHGNIIRTLPHPETFLHNNIVHAYALIR-----SSIYARRVFDGIPQPNLFSWNNLLLA 78

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG----VEPD 195
           Y + G L +  + F+K+  RD V+W+ +I  Y  +  V   +K +++M+++         
Sbjct: 79  YSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVT 138

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +TML L+ + G + SL   + IHG V++   +    +G+  + MYSK G +  A++ F 
Sbjct: 139 LMTMLKLSSSNGHV-SL--GKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFY 195

Query: 256 KIEKRCT------------------------------TSWTAMISCYNRSGWFQKALESF 285
            ++ R T                               SW+AMI    ++G  ++A+E F
Sbjct: 196 GLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECF 255

Query: 286 VKM----LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
            +M    L++ + P      +VL +C GLG + +G+ +H  IIR  +  ++ Y+G ALI+
Sbjct: 256 REMKIEGLKMDQYP----FGSVLPACGGLGAINDGRQIHACIIRTNL-QDHIYVGSALID 310

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            Y +C  +   + V   + ++N++SW  ++  Y + G + EA+++ + MQ  G+ PD ++
Sbjct: 311 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYT 370

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQ 460
           +  ++SAC N+ SL+ G Q HG  I         V +SL+ +Y KCG  + +  LF  + 
Sbjct: 371 LGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMN 430

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            +  V W +M+  + Q G ++EAI LF +M    L+ D VT    I ACS  G +EKG  
Sbjct: 431 VRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKG-- 488

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVS----WSAMIDCY 575
                                            QR F+ M +E  +V     +S MID +
Sbjct: 489 ---------------------------------QRYFELMINEYGIVPSNGHYSCMIDLF 515

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
              G++ +A      M     +P+ + +  +L AC + G++E GK+   ++    +E D 
Sbjct: 516 SRSGRIEEAMGFINGM---PFRPDAIGWTTLLSACRNKGNLEIGKWAAESL----IELDP 568

Query: 636 QHYA 639
            H A
Sbjct: 569 HHPA 572



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 193/418 (46%), Gaps = 64/418 (15%)

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPE-----------------------YDYLG-PALIEF 342
           C GLG  R  K +H  IIR    PE                       +D +  P L  +
Sbjct: 13  CIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSW 72

Query: 343 ------YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL-VQMQTWGL 395
                 Y++ G +SE E+    + +R+ ++WN+LI  Y+  G+   A++     M+ +  
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSK--------- 445
                ++ + L    + G + LG QIHG VIK+  +    V S L+DMYSK         
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 446 ----------------------CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
                                 CG    A  LF R  +K  V W++MI G  QNG   EA
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLF-RGMEKDSVSWSAMIKGLAQNGMEKEA 251

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           I  F +M +  L+MD+  F + + AC  +G +  G+ +H  +I   ++  IY+ +AL DM
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDM 311

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y KC  L  A+ VFD M ++NVVSW+AM+  YG  G+  +A  +F  M  SGI P+  T 
Sbjct: 312 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTL 371

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
              + AC++  S+EEG  +       G+   +     +V L  + GDI+ + ++ + M
Sbjct: 372 GQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM 429



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 155/350 (44%), Gaps = 35/350 (10%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA ++ T L       + LI+ Y +   L  ++ VFD  K+ +   W  ++  Y    
Sbjct: 288 QIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 347

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
              E++ ++  M R      ++     + AC+++  L  G + HG+ I  G      +  
Sbjct: 348 RAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSN 407

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  YG+ G +DD+ ++F++M  RD VSW++++++Y       E +++F  MV+ G++P
Sbjct: 408 SLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKP 467

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D VT+  +  AC     +   +                    F +M ++ G + S     
Sbjct: 468 DGVTLTGVISACSRAGLVEKGQRY------------------FELMINEYGIVPS----- 504

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
                     ++ MI  ++RSG  ++A+  F+  +  +  P+ I   T+L +C   G L 
Sbjct: 505 -------NGHYSCMIDLFSRSGRIEEAM-GFINGMPFR--PDAIGWTTLLSACRNKGNLE 554

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            GK     +I   + P +      L   YA  GK     ++   + E+N+
Sbjct: 555 IGKWAAESLIE--LDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNV 602



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 40/202 (19%), Positives = 86/202 (42%), Gaps = 6/202 (2%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C N+  L   ++ H   +  GL +    S  L+  Y + G +  S  +F+     D   
Sbjct: 377 ACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVS 436

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++  Y       E+I L+ KM++            V+ ACS  G +  G++    +I
Sbjct: 437 WTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMI 496

Query: 123 -KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEG 180
            + G    +   + ++  +   G +++A    + M  R D + W++++++  +  ++  G
Sbjct: 497 NEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIG 556

Query: 181 LKMFHSMVR-EGVEPDFVTMLS 201
                S++  +   P   T+LS
Sbjct: 557 KWAAESLIELDPHHPAGYTLLS 578



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 87/226 (38%), Gaps = 35/226 (15%)

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           +   I+ C  +G     K +H  +I      + ++   +   YA       A+RVFD + 
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPN--------------------- 599
           + N+ SW+ ++  Y   G L++    F+++ D  G+  N                     
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125

Query: 600 ----------EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
                      VT M +L   S +G V  GK     +   G E  L   + ++D+ S+ G
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185

Query: 650 DIEGAFKMIHSMPFPAN---GSIWGALLNGCRIHKRIDVMKTIEKE 692
            I  A K+ + +         ++ G LL    I   + + + +EK+
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKD 231


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/595 (32%), Positives = 320/595 (53%), Gaps = 28/595 (4%)

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH-SMVREGVEPDFVTMLSLAEACGELC 210
            FD + +RDV +W+ +I+ Y    + SE ++ F   M+  G+ PD+ T  S+ +AC  + 
Sbjct: 41  TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI 100

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
                  IH   L+     D  +  S I +YS+   + +A   F ++  R   SW AMIS
Sbjct: 101 D---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 157

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y +SG  ++AL +    L   +    +T++++L +C   G    G ++H   I+ G+  
Sbjct: 158 GYCQSGNAKEAL-TLSNGLRAMDS---VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 213

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           E                 + +C+KV   +  R+++SWN +I  Y        A+ L  +M
Sbjct: 214 EL----------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 257

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGF 448
           +   + PD  ++ S  S    +G ++    + G  ++     +D  + ++++ MY+K G 
Sbjct: 258 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 317

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQ 507
            + A  +F  +    V+ WN++I G+ QNG + EAI +++ M     +  ++ T+++ + 
Sbjct: 318 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 377

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           ACS  G L +G  +H +L+  G+  D+++ T+L DMY KCG L+ A  +F  +   N V 
Sbjct: 378 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 437

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+ +I C+G HG    A  LFK+MLD G+KP+ +TF+ +L ACSHSG V+EG++ F  M+
Sbjct: 438 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 497

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             +G+ P L+HY CMVD+  R+G +E A K I SM    + SIWGALL+ CR+H  +D+ 
Sbjct: 498 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 557

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K   + L        GY+ LLSN+YA  G W+   ++RSI    GL+K PG+S++
Sbjct: 558 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 612



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 278/552 (50%), Gaps = 27/552 (4%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN 95
           + ++  +   +S    FD  +  D + W ++I  Y       E I  +   +       +
Sbjct: 26  VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 85

Query: 96  F-IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           +  +PSVL+AC ++ D   G K+H   +K GF  D  +  S++  Y  +  + +AR +FD
Sbjct: 86  YRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 142

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M  RD+ SW+++I+ Y  + +  E L + + +       D VT++SL  AC E      
Sbjct: 143 EMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNR 198

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
             +IH + ++  ++ +         +   C      ++ F ++  R   SW ++I  Y  
Sbjct: 199 GVTIHSYSIKHGLESE---------LLRDC------QKVFDRMYVRDLISWNSIIKAYEL 243

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +    +A+  F +M   + +P+ +TLI++    + LG +R  +SV    +RKG   E   
Sbjct: 244 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 303

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G A++  YA+ G +     V + +   +++SWN +IS YA+ G + EA+E+   M+  G
Sbjct: 304 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 363

Query: 395 -LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
            +  +  +  S L AC   G+L+ G+++HG ++K     D FV +SL DMY KCG    A
Sbjct: 364 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 423

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             LF +I + + V WN++I     +G+  +A+ LF +M    ++ D +TF+T + ACS+ 
Sbjct: 424 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 483

Query: 513 GQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSA 570
           G +++G+W    +   YG+   +     + DMY + G L+TA +   SMS + +   W A
Sbjct: 484 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 543

Query: 571 MIDCYGMHGQLN 582
           ++    +HG ++
Sbjct: 544 LLSACRVHGNVD 555



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 233/486 (47%), Gaps = 33/486 (6%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           + ++C  +    ++H   L  G  +D   +  LI  Y+   ++ ++R++FD     D   
Sbjct: 92  VLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 151

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I  Y  +   +E++ L + +      + +    S+L AC+  GD   G  +H   I
Sbjct: 152 WNAMISGYCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 207

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G + +                L D +KVFD+M  RD++SW+SII +Y  N      + 
Sbjct: 208 KHGLESE---------------LLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 252

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMY 241
           +F  M    ++PD +T++SLA    +L  +R  RS+ G  LR+   + D  +GN+ +VMY
Sbjct: 253 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 312

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITL 300
           +K G + SA   F  +      SW  +IS Y ++G+  +A+E +  M E  E   N  T 
Sbjct: 313 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 372

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++VL +C+  G LR+G  +H ++++ G+  +  ++  +L + Y +CG++ +   + + I 
Sbjct: 373 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDV-FVVTSLADMYGKCGRLEDALSLFYQIP 431

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             N + WN LI+ +   G  ++A+ L  +M   G+ PD  +  + LSAC + G +  G  
Sbjct: 432 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 491

Query: 421 IHGHVIKIDCKDEFVQSSL------IDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
                 ++   D  +  SL      +DMY + G    A    + +  Q    +W +++  
Sbjct: 492 ----CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 547

Query: 474 FYQNGN 479
              +GN
Sbjct: 548 CRVHGN 553



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 225/478 (47%), Gaps = 32/478 (6%)

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF-VKMLEVKEEPNLITLITVLGSC 307
           S   TF  I+ R   +W  MIS Y R+G   + +  F + ML     P+  T  +VL +C
Sbjct: 37  SKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 96

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
                + +G  +HC  ++ G   +  Y+  +LI  Y+    +     +   +  R++ SW
Sbjct: 97  RT---VIDGNKIHCLALKFGFMWDV-YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 152

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +IS Y + G +KEAL L   ++      DS +V S LSAC   G    G+ IH + IK
Sbjct: 153 NAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK 208

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
              + E ++                  +F+R+  + ++ WNS+I  +  N   L AI+LF
Sbjct: 209 HGLESELLRD--------------CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 254

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAK 546
            +M L+ ++ D +T ++     S +G +   + V    +  G   +DI I  A+  MYAK
Sbjct: 255 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 314

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMN 605
            G + +A+ VF+ +   +V+SW+ +I  Y  +G  ++A  ++  M + G I  N+ T+++
Sbjct: 315 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 374

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           +L ACS +G++ +G      +   G+  D+     + D+  + G +E A  + + +P   
Sbjct: 375 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RV 433

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN--GYYTLLS----NIYAEEGNW 717
           N   W  L+     H   +    + KE+   G   +   + TLLS    +   +EG W
Sbjct: 434 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 491



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 11/233 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR+  +LH  LL  GL+ D    T L + Y + G L  +  +F      +S
Sbjct: 376 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 435

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  LI C+ ++   E++++L+ +M+ E     +  + ++L ACS  G +  G+     
Sbjct: 436 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF-E 494

Query: 121 IIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADV 177
           +++  +     ++    ++  YG  G L+ A K    M+   D   W +++++   + +V
Sbjct: 495 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 554

Query: 178 SEGLKMFHSMVREGVEPDFV---TMLS-LAEACGELCSLRPARSI-HGHVLRR 225
             G K+    + E VEP+ V    +LS +  + G+   +   RSI HG  LR+
Sbjct: 555 DLG-KIASEHLFE-VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 605



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ-MLDSGIKPNEVTFMNILWA 609
           ++    FD +  R+V +W+ MI  YG  G  ++    F   ML SG+ P+  TF ++L A
Sbjct: 36  KSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 95

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           C     ++  K +  A++ FG   D+   A ++ L SR   +  A  +   MP    GS 
Sbjct: 96  C--RTVIDGNKIHCLALK-FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS- 151

Query: 670 WGALLNG 676
           W A+++G
Sbjct: 152 WNAMISG 158


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/598 (31%), Positives = 326/598 (54%), Gaps = 6/598 (1%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           ++++FD+   + +   + ++  +  N    E L +F  + R G   D  ++  + + CG 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           L      + +H   ++     D  +G S + MY K   +   ER F ++  +   SWT++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           ++ Y ++G  ++AL+ F +M     +PN  T   VLG  A  G + +G  VH  +I+ G+
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
                ++G +++  Y++   +S+ + V  ++  RN +SWN +I+ +   G+  EA EL  
Sbjct: 225 DSTI-FVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG 447
           +M+  G+       A+ +  C N+  +    Q+H  VIK     D  ++++L+  YSKC 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343

Query: 448 FKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLN-CLEMDEVTFLTA 505
             + A+ LF  +   ++VV W ++I G+ QNG +  A+NLF QM     +E +E TF + 
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSV 403

Query: 506 IQACSN-IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
           + AC+     +E+GK  H   I  G    + + +AL  MYAK G++++A  VF    +R+
Sbjct: 404 LNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 463

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +VSW++MI  Y  HG    +  +F++M    ++ + +TF+ ++ AC+H+G V EG+ YF+
Sbjct: 464 LVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 523

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            M + + + P ++HY+CMVDL SR+G +E A  +I+ MPFPA  +IW  LL  CR+H  +
Sbjct: 524 LMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNV 583

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + +   ++L      D+  Y LLSNIYA  GNW E  KVR +M++  +KK  GYS I
Sbjct: 584 QLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 641



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 274/535 (51%), Gaps = 24/535 (4%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           S +L +   + G  R++ L+F+                +  N+  +E++ L+  + R  +
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFE----------------FSRNDQNKEALNLFLGLRRSGS 88

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
                    VL+ C  L D   G++VH + IKCGF +D  + TS++  Y +   ++D  +
Sbjct: 89  PTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGER 148

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VFD+M  ++VVSW+S++A Y  N    + LK+F  M  EG++P+  T  ++        +
Sbjct: 149 VFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGA 208

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           +     +H  V++  +     +GNS + MYSK   +  A+  F  +E R   SW +MI+ 
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG 268

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           +  +G   +A E F +M     +       TV+  CA +  +   K +HCQ+I+   G +
Sbjct: 269 FVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKN--GSD 326

Query: 332 YDY-LGPALIEFYAECGKMSECEKVIHAI-GERNILSWNMLISEYARKGMSKEALELLVQ 389
           +D  +  AL+  Y++C ++ +  K+   + G +N++SW  +IS Y + G +  A+ L  Q
Sbjct: 327 FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQ 386

Query: 390 M-QTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKC 446
           M +  G+ P+ F+ +S L+AC     S++ G Q H   IK    +   V S+L+ MY+K 
Sbjct: 387 MRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKR 446

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G    A  +F+R   + +V WNSMI G+ Q+G   +++ +F +M    LE+D +TF+  I
Sbjct: 447 GNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVI 506

Query: 507 QACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            AC++ G + +G+     ++  Y +   +   + + D+Y++ G L+ A  + + M
Sbjct: 507 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 226/467 (48%), Gaps = 11/467 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   +  G   D    T L++ Y +  S+     VFD  +  +   W  L+  Y  N 
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E+++ L+ +M  E    + F + +VL   ++ G +  G +VH  +IK G D    +  
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y +   + DA+ VFD M +R+ VSW+S+IA +  N    E  ++F+ M  EGV+ 
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
                 ++ + C  +  +  A+ +H  V++     D  +  + +V YSKC ++  A + F
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352

Query: 255 VKIEK-RCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAG-LG 311
             +   +   SWTA+IS Y ++G   +A+  F +M  E   EPN  T  +VL +CA    
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTA 412

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            + +GK  H   I+ G       +  AL+  YA+ G +    +V     +R+++SWN +I
Sbjct: 413 SVEQGKQFHSCSIKSGFSNAL-CVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMI 471

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---- 427
           S YA+ G  K++L++  +M++  L  D  +    +SAC + G +  G +    ++K    
Sbjct: 472 SGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHI 531

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
           +   + +  S ++D+YS+ G    A  L  ++       +W +++  
Sbjct: 532 VPTMEHY--SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 211/442 (47%), Gaps = 39/442 (8%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           + K  ++H  ++ +GL         ++  Y++   +  ++ VFD+ +  ++  W  +I  
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG 268

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           ++ N    E+  L+++M  E   ++  I+ +V++ C+++ ++   +++H ++IK G D D
Sbjct: 269 FVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFD 328

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
             I+T+++  Y +   +DDA K+F  M   ++VVSW++II+ Y  N      + +F  M 
Sbjct: 329 LNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMR 388

Query: 189 R-EGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           R EGVEP+  T  S+  AC     S+   +  H   ++        + ++ + MY+K G+
Sbjct: 389 REEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGN 448

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + SA   F +   R   SW +MIS Y + G  +K+L+ F +M     E + IT I V+ +
Sbjct: 449 IESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISA 508

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C   G + EG+     +++       DY     +E Y+                      
Sbjct: 509 CTHAGLVNEGQRYFDLMVK-------DYHIVPTMEHYS---------------------- 539

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV-ASSLSACGNVGSLQLGLQIHGHV 425
              ++  Y+R GM ++A++L+ +M      P   ++  + L+AC    ++QLG      +
Sbjct: 540 --CMVDLYSRAGMLEKAMDLINKMP----FPAGATIWRTLLAACRVHLNVQLGELAAEKL 593

Query: 426 IKIDCKDEFVQSSLIDMYSKCG 447
           I +  +D      L ++Y+  G
Sbjct: 594 ISLQPQDSAAYVLLSNIYATAG 615


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 179/528 (33%), Positives = 301/528 (57%), Gaps = 7/528 (1%)

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
            +H   +      D  + N  I MY KC  +  A   F ++ +R   SWTA++  Y + G
Sbjct: 25  QVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEG 84

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             + +L    +M     +PN  T  T L +C  LG +  G  +H   ++ G       +G
Sbjct: 85  NAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGF-EWVSVVG 143

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            A I+ Y++CG++   E+V + +  RN++SWN +I+ +  +G  +++L L  +MQ  G +
Sbjct: 144 NATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEV 203

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCGFKNLA 452
           PD F+  S+L ACG +G+++ G QIH  +I     I  ++  + S+++D+Y+KCG+   A
Sbjct: 204 PDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRN-IIASAIVDLYAKCGYLFEA 262

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+RI+QK+++ W+++I GF Q GN LEA++LF Q+  +   +D       +   +++
Sbjct: 263 QKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADL 322

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             +E+GK +H  ++      DI +  ++ DMY KCG  + A+R+F  M  RNVVSW+ MI
Sbjct: 323 ALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMI 382

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             YG HG    A  LF +M   GI+ +EV ++ +L ACSHSG + E + YF+ +     +
Sbjct: 383 TGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQM 442

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           +P+++HYACMVD+L R+G ++ A  +I +M    N  IW  LL+ CR+H  +++ + + +
Sbjct: 443 KPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGE 502

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            L    T++   Y ++SNIYAE G W E  +VR +++  GLKK  G S
Sbjct: 503 ILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQS 550



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 270/524 (51%), Gaps = 35/524 (6%)

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
             +LR CS  G    G +VH   +  GF  D ++   ++  YG+   +D A  VFD+M  
Sbjct: 8   AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           R+VVSW++++  Y    +    L +   M   GV+P+  T  +  +ACG L  +     I
Sbjct: 68  RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQI 127

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG  ++   +    +GN+ I MYSKCG +  AE+ F K+  R   SW AMI+ +   G  
Sbjct: 128 HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNG 187

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY-DYLGP 337
           +K+L  F +M    E P+  T  + L +C  LG +R G  +H  +I +G      + +  
Sbjct: 188 RKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIAS 247

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A+++ YA+CG + E +KV   I ++N++SW+ LI  +A++G   EA++L  Q++      
Sbjct: 248 AIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNV 307

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           D F ++  +    ++  ++ G Q+H +++K+    D  V +S+IDMY KCG    A  LF
Sbjct: 308 DGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLF 367

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             +Q ++VV W  MI G+ ++G   +AI+LF++M L+ +E+DEV +L  + ACS+ G + 
Sbjct: 368 SEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIR 427

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
           + +    +L                     C + Q          + N+  ++ M+D  G
Sbjct: 428 ESQEYFSRL---------------------CNNHQM---------KPNIEHYACMVDILG 457

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
             GQL +A +L + M    +KPNE  +  +L AC   G++E G+
Sbjct: 458 RAGQLKEAKNLIENM---KLKPNEGIWQTLLSACRVHGNLEIGR 498



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 270/560 (48%), Gaps = 39/560 (6%)

Query: 2   PLFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
            L R+C+      +  ++HA  +  G  +D   +  LI+ Y +   +  +  VFD   E 
Sbjct: 9   KLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLER 68

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   W  L+  Y+     + S+ L  +M       + F + + L+AC +LG + +G ++H
Sbjct: 69  NVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIH 128

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G  +K GF+   V+  + +  Y + G +  A +VF+KM  R++VSW+++IA +    +  
Sbjct: 129 GMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGR 188

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR--KIKIDGPLGNS 236
           + L +F  M  +G  PD  T  S  +ACG L ++R    IH  ++ R   I I   + ++
Sbjct: 189 KSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASA 248

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + +Y+KCG L  A++ F +IE++   SW+A+I  + + G   +A++ F ++ E     +
Sbjct: 249 IVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVD 308

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
              L  ++G  A L  + +GK +HC I++   G +   +  ++I+ Y +CG   E E++ 
Sbjct: 309 GFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDIS-VANSIIDMYLKCGLTEEAERLF 367

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  RN++SW ++I+ Y + G+ ++A+ L  +MQ  G+  D  +  + LSAC + G ++
Sbjct: 368 SEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIR 427

Query: 417 LGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
                       + ++ F  S L + +                 + ++  +  M+    +
Sbjct: 428 ------------ESQEYF--SRLCNNHQ---------------MKPNIEHYACMVDILGR 458

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            G   EA NL   M    L+ +E  + T + AC   G LE G+ V   L        +  
Sbjct: 459 AGQLKEAKNLIENMK---LKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNY 515

Query: 537 DTALTDMYAKCGDLQTAQRV 556
              ++++YA+ G  +  +RV
Sbjct: 516 -VMMSNIYAEAGYWKECERV 534



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 200/384 (52%), Gaps = 5/384 (1%)

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L  +L +C+  G   +G  VH   +  G G +   +   LI+ Y +C ++     V   +
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDL-IMNNDLIDMYGKCSRVDLACSVFDRM 65

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            ERN++SW  L+  Y ++G +K +L LL +M   G+ P+ F+ ++SL ACG +G ++ G+
Sbjct: 66  LERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGM 125

Query: 420 QIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           QIHG  +K   +    V ++ IDMYSKCG   +A  +F ++  +++V WN+MI G    G
Sbjct: 126 QIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEG 185

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI--YI 536
           N  +++ LF +M       DE TF + ++AC  +G +  G  +H  LI+ G    I   I
Sbjct: 186 NGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNII 245

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +A+ D+YAKCG L  AQ+VFD + ++N++SWSA+I  +   G L +A  LF+Q+ +S  
Sbjct: 246 ASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVS 305

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
             +      ++   +    VE+GK     +       D+     ++D+  + G  E A +
Sbjct: 306 NVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAER 365

Query: 657 MIHSMPFPANGSIWGALLNGCRIH 680
           +   M    N   W  ++ G   H
Sbjct: 366 LFSEMQVR-NVVSWTVMITGYGKH 388



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 167/322 (51%), Gaps = 5/322 (1%)

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYL 454
           M +   +A  L  C   G    GLQ+H   + +    D  + + LIDMY KC   +LA  
Sbjct: 1   MSERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACS 60

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           +F+R+ +++VV W +++CG+ Q GN+  ++ L  +M  + ++ +E TF T+++AC  +G 
Sbjct: 61  VFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGV 120

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           +E G  +H   +  G      +  A  DMY+KCG +  A++VF+ M  RN+VSW+AMI  
Sbjct: 121 VENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAG 180

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +   G    +  LF++M   G  P+E TF + L AC   G++  G     ++   G    
Sbjct: 181 HTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPIS 240

Query: 635 LQHY--ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           +++   + +VDL ++ G +  A K+   +    N   W AL+ G      +     + ++
Sbjct: 241 IRNIIASAIVDLYAKCGYLFEAQKVFDRIE-QKNLISWSALIQGFAQEGNLLEAMDLFRQ 299

Query: 693 LSVTGTNDNGY-YTLLSNIYAE 713
           L  + +N +G+  +++  ++A+
Sbjct: 300 LRESVSNVDGFVLSIMMGVFAD 321


>gi|302756495|ref|XP_002961671.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
 gi|300170330|gb|EFJ36931.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
          Length = 934

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 217/725 (29%), Positives = 355/725 (48%), Gaps = 28/725 (3%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  +LR    +H  L   G   D    T L+  Y + GS+  +  VFD     D  +W+ 
Sbjct: 219 SLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSA 278

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +I  ++    +EES+ L+ KM  E    +N    SVL AC     L +G+ +H  +++ G
Sbjct: 279 VISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAG 338

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           ++ D ++  +I+  YG+ G L+DA  VF ++  R VV+ + ++ +     D S  LK+F 
Sbjct: 339 YEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFR 398

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            MV EG+E D +T LS   AC     L      H  +L   +++D  + N+ + MY KCG
Sbjct: 399 YMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCG 458

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            + +AE  F ++ ++   +W AMI  Y ++   +  L  F  M++   +P+ +T    L 
Sbjct: 459 KVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLN 518

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +C    +LR+   VH  I   G+      +  AL+  Y   G + E  +V   + + +I 
Sbjct: 519 ACYHPRFLRD---VHSLISETGISN--TVVQNALVVMYGRFGLLEEGYQVFEKLDQESIT 573

Query: 366 SWNMLISE------------YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           SWN++I+             + + G   EAL++  +MQ  G+ PD  S  + + A  NVG
Sbjct: 574 SWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVG 633

Query: 414 SLQLGLQ-IHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             +  +  +   +   D +D   + ++LI MY +CG    A  LF+ + ++  V WN+M+
Sbjct: 634 MTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMM 693

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK----WVHHKLIS 527
               Q  +  ++I LF QM       D+VT LT +  C+++  L++GK    W+ H  +S
Sbjct: 694 SVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICVWLDHTPLS 753

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
                +  I  A+ +MYAKCG    A+R+F  M  R+ VSW+A+I  YG + +   A  +
Sbjct: 754 ----ANQMIGNAILNMYAKCGSRDEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQI 809

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLS 646
           F+ M   G  P+ VTF  IL  CSH G + E   +F  MR  + VE +  HY C+VDLL 
Sbjct: 810 FQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLG 869

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R G +  A ++   MP   +  +W  LL+ C++H      K   + L          Y +
Sbjct: 870 RLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGKRAAERLVELDPEVTSAYVV 929

Query: 707 LSNIY 711
           LS IY
Sbjct: 930 LSTIY 934



 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 186/635 (29%), Positives = 328/635 (51%), Gaps = 25/635 (3%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F +C N   L    ++HA+L     + D    + LI  Y + GSL  + L+F + +E +
Sbjct: 115 IFEACGNPENLEDGKKIHAYL---SCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWN 171

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W  L+  ++ ++  EE++ LY +M++     S   + +VL A SSL  L  G+ VH 
Sbjct: 172 TVAWNSLMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHD 231

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + + G + D V+QT+++  YG+ G + +A +VFD+M   DV+ WS++I+++ + A+  E
Sbjct: 232 TLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEE 291

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M  EG  P+ VT++S+  AC    +L   + IH  V+    + D  +GN+ + 
Sbjct: 292 SLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVS 351

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG L  A   F ++ +R   +   M+      G    AL+ F  M+    E + IT
Sbjct: 352 MYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNIT 411

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA 358
            ++ L +C+G   L  G+  H +++  G+  E D ++  AL+  Y +CGK+   E V   
Sbjct: 412 FLSALCACSGTSGLSHGEFFHARMLECGL--ELDIFVANALVNMYGKCGKVEAAEHVFEE 469

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E+++ +WN +I  Y +    +  L +   M   G  PD  + A +L+AC +   L+  
Sbjct: 470 LPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHPRFLR-- 527

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC------ 472
             +H  + +    +  VQ++L+ MY + G     Y +FE++ Q+S+  WN MI       
Sbjct: 528 -DVHSLISETGISNTVVQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTC 586

Query: 473 ------GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKL 525
                    Q+G   EA+ +F +M    +  D+ +F+  ++A SN+G  E    W+   +
Sbjct: 587 WNSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVI 646

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
            +  V   + I  AL  MY +CG    A+ +FDSM+ER+ V+W+ M+          D+ 
Sbjct: 647 ANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSI 706

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            LF+QML  G  P++VT + +L  C+   +++EGK
Sbjct: 707 QLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGK 741



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 166/519 (31%), Positives = 281/519 (54%), Gaps = 8/519 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  +LR CS   DL  G ++H  I +    +D V+   ++  Y + G L DA +VF ++ 
Sbjct: 8   FVDLLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLL 67

Query: 158 SRDVV---SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
              VV   +W+++IA+Y  N      +++F  M  EG  PD +T++++ EACG   +L  
Sbjct: 68  ETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLED 127

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IH ++       D  LG+S I MY KCG L  A   F  +E+  T +W +++  + +
Sbjct: 128 GKKIHAYL---SCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFIQ 184

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
               ++A+E + +ML+    P+  T +TVL + + L  LR GK VH  +   G   +   
Sbjct: 185 HDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDV-V 243

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  AL+  Y +CG + E  +V   +   +++ W+ +IS +      +E+L L  +MQ  G
Sbjct: 244 VQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEG 303

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
             P++ ++ S LSAC    +L+ G  IH  V++   + D  V ++++ MY KCG    A+
Sbjct: 304 NRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAW 363

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F R+ ++SVV  N M+      G+S  A+ LF  M    +E D +TFL+A+ ACS   
Sbjct: 364 DVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTS 423

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L  G++ H +++  G+  DI++  AL +MY KCG ++ A+ VF+ + E++V +W+AMI 
Sbjct: 424 GLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMIL 483

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
            Y  + +      +F+ M+ SG KP+EVTF   L AC H
Sbjct: 484 AYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYH 522



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 171/634 (26%), Positives = 308/634 (48%), Gaps = 27/634 (4%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
           L R C+  + L R   +HA +  +    DP     LI+ Y + GSL  +  VF    E  
Sbjct: 11  LLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETS 70

Query: 59  --DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             +   W  LI  Y  N   + +I L+ +M  E  +       ++  AC +  +L  G+K
Sbjct: 71  VVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKK 130

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H   + C  + D V+ +S++  YG+ G L +A  +F  M   + V+W+S++ ++  +  
Sbjct: 131 IHA-YLSC--NSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFIQHDR 187

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           V E ++++  M++ G  P   T L++  A   L SLR  + +H  +     + D  +  +
Sbjct: 188 VEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDVVVQTA 247

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY KCG ++ A   F ++ +     W+A+IS +     ++++L  F KM      PN
Sbjct: 248 LVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPN 307

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +TL++VL +C G   L  GK +H  ++  G   +   +G A++  Y +CG + +   V 
Sbjct: 308 NVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDL-IVGNAIVSMYGKCGSLEDAWDVF 366

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           H +  R++++ N ++   A +G S  AL+L   M   G+  D+ +  S+L AC     L 
Sbjct: 367 HRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTSGLS 426

Query: 417 LGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G   H  +++   + D FV ++L++MY KCG    A  +FE + ++ V  WN+MI  + 
Sbjct: 427 HGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMILAYV 486

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           QN      + +F  M  +  + DEVTF   + AC +   L       H LIS     +  
Sbjct: 487 QNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHPRFLRD----VHSLISETGISNTV 542

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI-----DCYG-------MHGQLND 583
           +  AL  MY + G L+   +VF+ + + ++ SW+ MI      C+          G+ ++
Sbjct: 543 VQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSE 602

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           A  +F +M  +G+ P++ +F+ ++ A S+ G  E
Sbjct: 603 ALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTE 636



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 243/480 (50%), Gaps = 11/480 (2%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
           + L   C     L   R IH  + R     D  +GN  I MY KCG L+ A + F ++ +
Sbjct: 9   VDLLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLE 68

Query: 260 RCTT---SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
                  +WTA+I+ Y R+G  + A+  F +M      P+ ITL+T+  +C     L +G
Sbjct: 69  TSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDG 128

Query: 317 KSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           K +H       +    D  LG +LI  Y +CG +SE   +  ++ E N ++WN L+  + 
Sbjct: 129 KKIHAY-----LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFI 183

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
           +    +EA+EL  +M   G +P   +  + L+A  ++ SL+ G  +H  + +   +D+ V
Sbjct: 184 QHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDVV 243

Query: 436 -QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
            Q++L++MY KCG    A  +F+R+ +  V++W+++I          E++ LF +M L  
Sbjct: 244 VQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEG 303

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
              + VT ++ + AC     LE GK +H  ++  G   D+ +  A+  MY KCG L+ A 
Sbjct: 304 NRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAW 363

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            VF  +  R+VV+ + M+    + G  + A  LF+ M+  GI+ + +TF++ L ACS + 
Sbjct: 364 DVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTS 423

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            +  G+F+   M   G+E D+     +V++  + G +E A  +   +P   +   W A++
Sbjct: 424 GLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELP-EQDVRTWNAMI 482


>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 631

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 196/634 (30%), Positives = 338/634 (53%), Gaps = 51/634 (8%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRP 214
           M  R+++SWSS+++ Y       E L +F    R   E P+   + S+  AC ++     
Sbjct: 1   MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGG-SI 59

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + +HG  ++     +  +G S + +Y+K G++  A   F  + ++   +WT +I+   +
Sbjct: 60  DKQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVK 119

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G  + +L+ F +M E    P+   L +VLG+C+ L +++ GK +H  ++R+G+  +  +
Sbjct: 120 RGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSF 179

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +   LI+FY + GK+    K+   + +RN++SW  +I+ Y +    +EA++L ++M   G
Sbjct: 180 VN-VLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLG 238

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
             PD F   S L++CG++ +L+LG Q+H + IK + + D F+Q+ LIDMY+KCG  N A 
Sbjct: 239 RRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDAR 298

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F+ +  ++VV +N++I G+       EA+NLF +M    L    +TF++ + A + + 
Sbjct: 299 KVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLS 358

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LE GK +H  +  +G+  +I+  +AL D Y+KC  L  A+ VFD M+E+++V W+AM+ 
Sbjct: 359 ALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLF 418

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH--------------------- 612
            Y    +  +A  L+ ++  S  KPN VTF  +  A S+                     
Sbjct: 419 GYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDS 478

Query: 613 ------------------------SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
                                    G V++G  YF +M  F ++P  +HYAC+V LL RS
Sbjct: 479 HPFTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRS 538

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK-TIEKELSVTGTNDNGYYTLL 707
           G +  A + I  MP      +W +LL+ CR+   +++ K   EK +S+  T D+G YTLL
Sbjct: 539 GKLYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDST-DSGSYTLL 597

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           SNIYA +G W +  KVR  M++ G+ K  G+S I
Sbjct: 598 SNIYASKGMWVDVKKVRERMDIAGVVKEAGHSWI 631



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 164/567 (28%), Positives = 278/567 (49%), Gaps = 20/567 (3%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   + +G   +    T L++ YA+ G++  +RLVFD   E  +  W  +I   +   
Sbjct: 62  QMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRG 121

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E S+ L+ +M         +I  SVL ACS L  +  G+++HG +++ G + D     
Sbjct: 122 RSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVN 181

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            ++  Y + G +  ARK+FD M  R+V+SW+++IA Y  N+   E +K+F  M R G  P
Sbjct: 182 VLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRP 241

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D     S+  +CG L +L   R +H + ++  ++ D  L N  I MY+KCG L  A + F
Sbjct: 242 DGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVF 301

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +  R   S+ A+I  Y+      +A+  F +M      P+ +T +++LG+ A L  L 
Sbjct: 302 DDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALE 361

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  I + G+  E  + G ALI+FY++C  + +   V   + E++I+ WN ++  Y
Sbjct: 362 LGKQIHALITKFGISMEI-FAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGY 420

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE- 433
            ++  ++EAL+L  ++Q     P+  + A+  +A  N+ SLQ G Q H H+IK       
Sbjct: 421 TQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHP 480

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQ--------------QKSVVMWNSMICGFYQNGN 479
           F  +SLIDMY+KCG    A   F  ++              +     +  ++    ++G 
Sbjct: 481 FTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGK 540

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             EA     +M     E + V + + + AC   G +E GK+   K IS     D    T 
Sbjct: 541 LYEAKEFIEKM---PTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISID-STDSGSYTL 596

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVV 566
           L+++YA  G     ++V + M    VV
Sbjct: 597 LSNIYASKGMWVDVKKVRERMDIAGVV 623


>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera]
 gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/549 (35%), Positives = 309/549 (56%), Gaps = 15/549 (2%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           +LSL + C    S +  + IH  ++   I     L + FI +     D  +A   F +I 
Sbjct: 34  LLSLLKQC---TSTKSLQQIHTQMIINAIHKPNFLLHRFIDLK----DFNNASLLFSQIP 86

Query: 259 KRCTTSWTAMISCYNRSGW--FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
                ++  MI     + W  F   +E + +M +    PN  T   V  +CA L  L  G
Sbjct: 87  YPNEYAFNIMIRGLTTT-WQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHG 145

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           +  H  +++ G+  +  ++  +LI  Y+ CG++    +V   I E++++SWN +IS Y+R
Sbjct: 146 QCAHSGVLKSGLCAD-GHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSR 204

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFV 435
            G + +A+ L  +M+  G  PD  ++ S L ACG++G L LG  I G V++ +   + FV
Sbjct: 205 MGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFV 264

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            S+LI MY KCG  + A  +F+R+ +K VV WN+MI G+ QNG S EAI LF  M  + +
Sbjct: 265 GSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGV 324

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D++T +  + AC++IG L+ GKW+       G++ DIY+ TAL DMYAKCG L  A R
Sbjct: 325 NPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALR 384

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG--IKPNEVTFMNILWACSHS 613
           VF+ M ++N VSW+AMI     HG+  ++ SLFK+M   G  ++PN+++F+ +L AC H+
Sbjct: 385 VFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHA 444

Query: 614 GSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G V+EG+  F+ M   FG+ P ++H++CMVDLL+R+G +  A+  I  MP   +  + GA
Sbjct: 445 GLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGA 504

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C+  + +DV + +   L      ++G Y + S I+A    WD+  ++R +M   G+
Sbjct: 505 LLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGV 564

Query: 733 KKVPGYSTI 741
            K PG S I
Sbjct: 565 TKTPGCSWI 573



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 250/476 (52%), Gaps = 28/476 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L + CT+ + L ++H  +++  +H        L+  + ++    ++ L+F     P+ 
Sbjct: 35  LSLLKQCTSTKSLQQIHTQMIINAIH----KPNFLLHRFIDLKDFNNASLLFSQIPYPNE 90

Query: 61  FMWAVLIK--CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + + ++I+     W  F   +I  Y++M       +NF YP V  AC++L  L  G+  H
Sbjct: 91  YAFNIMIRGLTTTWQKF-NLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAH 149

Query: 119 GRIIKCGFDKDDVIQTSILCTY---GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
             ++K G   D  ++ S++  Y   GE GC   AR+VFD+++ +D+VSW+S+I+ Y    
Sbjct: 150 SGVLKSGLCADGHVRHSLITMYSRCGELGC---ARRVFDEISEKDLVSWNSMISGYSRMG 206

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              + + +F  M   G EPD +T++S+  ACG+L  L     I G V+  ++ ++  +G+
Sbjct: 207 YAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGS 266

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + I MY KCGDL SA R F ++ K+   +W AMI+ Y ++G   +A+  F  M E    P
Sbjct: 267 ALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNP 326

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + ITL+ VL +CA +G L  GK +      +G+  +  Y+  ALI+ YA+CG + +  +V
Sbjct: 327 DKITLVGVLSACASIGALDFGKWLDTYASERGLQNDI-YVSTALIDMYAKCGSLDDALRV 385

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVG 413
              + ++N +SWN +IS  A  G  +E+L L  +M   G  + P+  S    LSAC + G
Sbjct: 386 FEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAG 445

Query: 414 SLQLGLQI-------HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
            +  G Q+        G V KI+       S ++D+ ++ G  + A+   E++ +K
Sbjct: 446 LVDEGRQLFDLMSSSFGLVPKIEH-----HSCMVDLLARAGHVHEAWDFIEKMPEK 496


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 233/749 (31%), Positives = 375/749 (50%), Gaps = 31/749 (4%)

Query: 16   LHAHLLVTGLHY--DPPASTRLIESYAE-MGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
            +  H L++   Y  D      LI  Y   + S   +R VFD     +S  W  +I  Y  
Sbjct: 667  VQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSR 726

Query: 73   NNFFEESILLYHKMIREQATIS----NFIYPSVLRACSSLGDLG--SGEKVHGRIIKCGF 126
                  +  L+  M +E    S     + + S++ A  S  D G    E++  R+ K GF
Sbjct: 727  RGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGF 786

Query: 127  DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             +D  + ++++  +  FG  DDA+ +F++M  R+VVS + ++             K+FH 
Sbjct: 787  LQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHE 846

Query: 187  MVR-EGVEPD-FVTMLSLAEACGELCSL----RPARSIHGHVLRRKIKIDG-PLGNSFIV 239
            M    G+  D +V +LS   A  E   L    R  R +H HV+R  +  +   +GN  + 
Sbjct: 847  MKDLVGINSDSYVVLLS---AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 903

Query: 240  MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            MY+K G +  A   F  + ++ + SW ++IS  +++   + A ESF++M      P+  T
Sbjct: 904  MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFT 963

Query: 300  LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            LI+ L SCA LGW+  G+ +HC  ++ G+  +   +  AL+  YAE G  +EC KV   +
Sbjct: 964  LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS-VSNALLALYAETGCFTECLKVFSLM 1022

Query: 360  GERNILSWNMLISEYARKGMS-KEALELLVQMQT--WGLMPDSFSVASSLSACGNVGSLQ 416
             E + +SWN +I   +    S  +A++  ++M    WGL   +F   + LSA  ++   +
Sbjct: 1023 PEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTF--INILSAVSSLSLHE 1080

Query: 417  LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGF 474
            +  QIH  V+K    D+  + ++L+  Y KCG  N    +F R+ + +  V WNSMI G+
Sbjct: 1081 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 1140

Query: 475  YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
              N    +A++L   M      +D  TF T + AC+++  LE+G  VH   I   +  D+
Sbjct: 1141 IHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDV 1200

Query: 535  YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
             + +AL DMY+KCG +  A R F+ M  RNV SW++MI  Y  HG    A  LF +M+  
Sbjct: 1201 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 1260

Query: 595  GIKPNEVT-FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
            G  P+ V   + +L ACSH G VEEG  +F +M  ++ + P ++H++CMVDLL R+G ++
Sbjct: 1261 GQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 1320

Query: 653  GAFKMIHSMPFPANGSIWGALLNG-CRIHKRIDVMKTIEKELSVTGTNDNGY-YTLLSNI 710
                 I+SMP   N  IW  +L   CR + R   +     E+ +     N   Y LL+N+
Sbjct: 1321 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANM 1380

Query: 711  YAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            YA    W++  K R  M+   +KK  G S
Sbjct: 1381 YASGEKWEDVAKARXAMKEAAVKKEAGCS 1409



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 185/669 (27%), Positives = 323/669 (48%), Gaps = 26/669 (3%)

Query: 32   STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
            S  LI  Y  +G L S++ +FD     +   WA LI  Y  N   +E+   +  M+R   
Sbjct: 582  SNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGF 641

Query: 92   TISNFIYPSVLRACSSLGDLGS--GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD-- 147
              +++ + S LRAC   G  G   G ++HG I K  +  D V+   ++  YG   CLD  
Sbjct: 642  IPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG--SCLDSA 699

Query: 148  -DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV----EPDFVTMLSL 202
             DAR VFD++  R+ +SW+SII+ Y    D      +F SM +EG+    +P+  T  SL
Sbjct: 700  NDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSL 759

Query: 203  -AEACGE----LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
               AC      LC L     +   V +     D  +G++ +  +++ G    A+  F ++
Sbjct: 760  ITAACSSVDFGLCVL---EQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQM 816

Query: 258  EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK--EEPNLITLITVLGSCAGL-GWLR 314
              R   S   ++    +    + A + F +M ++      + + L++     + L    R
Sbjct: 817  GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRR 876

Query: 315  EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            +G+ VH  +IR G+      +G  L+  YA+ G +++   V   + E++ +SWN LIS  
Sbjct: 877  KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 936

Query: 375  ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
             +   S++A E  ++M+  G MP +F++ S+LS+C ++G + LG QIH   +K+    D 
Sbjct: 937  DQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 996

Query: 434  FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL-EAINLFHQMYL 492
             V ++L+ +Y++ G       +F  + +   V WNS+I     +  S+ +A+  F +M  
Sbjct: 997  SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMR 1056

Query: 493  NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
                +  VTF+  + A S++   E    +H  ++ Y +  D  I  AL   Y KCG++  
Sbjct: 1057 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 1116

Query: 553  AQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
             +++F  MSE R+ VSW++MI  Y  +  L+ A  L   M+  G + +  TF  +L AC+
Sbjct: 1117 CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACA 1176

Query: 612  HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
               ++E G           +E D+   + +VD+ S+ G I+ A +    MP   N   W 
Sbjct: 1177 SVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPL-RNVYSWN 1235

Query: 672  ALLNGCRIH 680
            ++++G   H
Sbjct: 1236 SMISGYARH 1244



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/414 (33%), Positives = 216/414 (52%), Gaps = 5/414 (1%)

Query: 11   RKLTRLHAHLLVTGLHYDPPA-STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
            RK   +HAH++ TGL+ +  A    L+  YA+ G++  +  VF+   E DS  W  LI  
Sbjct: 876  RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISG 935

Query: 70   YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
               N   E++   + +M R  +  SNF   S L +C+SLG +  GE++H   +K G D D
Sbjct: 936  LDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTD 995

Query: 130  DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN-ADVSEGLKMFHSMV 188
              +  ++L  Y E GC  +  KVF  M   D VSW+S+I +  D+ A VS+ +K F  M+
Sbjct: 996  VSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMM 1055

Query: 189  REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            R G     VT +++  A   L     +  IH  VL+  +  D  +GN+ +  Y KCG++ 
Sbjct: 1056 RGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMN 1115

Query: 249  SAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
              E+ F ++ E R   SW +MIS Y  +    KA++    M++  +  +  T  TVL +C
Sbjct: 1116 ECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSAC 1175

Query: 308  AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
            A +  L  G  VH   IR  M  +   +G AL++ Y++CG++    +    +  RN+ SW
Sbjct: 1176 ASVATLERGMEVHACGIRACMESDV-VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSW 1234

Query: 368  NMLISEYARKGMSKEALELLVQMQTWGLMPDSFS-VASSLSACGNVGSLQLGLQ 420
            N +IS YAR G  ++AL+L  +M   G  PD  + +   LSAC +VG ++ G +
Sbjct: 1235 NSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFE 1288



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 162/598 (27%), Positives = 282/598 (47%), Gaps = 32/598 (5%)

Query: 114  GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
              ++H + IK GF  +  +  +++  Y   G L  A+K+FD+M++R++V+W+ +I+ Y  
Sbjct: 563  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 174  NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL----CSLRPARSIHGHVLRRKIKI 229
            N    E    F  MVR G  P+     S   AC E     C L     IHG + + +   
Sbjct: 623  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL--GVQIHGLISKTRYGS 680

Query: 230  DGPLGNSFIVMYSKCGDLLSAERT-FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            D  + N  I MY  C D  +  R+ F +I  R + SW ++IS Y+R G    A + F  M
Sbjct: 681  DVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740

Query: 289  ----LEVKEEPNLIT---LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
                L    +PN  T   LIT   S    G L   + +  ++ + G   +  Y+G AL+ 
Sbjct: 741  QKEGLGFSFKPNEYTFGSLITAACSSVDFG-LCVLEQMLARVEKSGFLQDL-YVGSALVS 798

Query: 342  FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-GLMPDSF 400
             +A  G   + + +   +G RN++S N L+    ++   + A ++  +M+   G+  DS+
Sbjct: 799  GFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSY 858

Query: 401  SVASSLSACGNVGSLQ----LGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYL 454
             V   LSA      L+     G ++H HVI+    D  V   + L++MY+K G    A  
Sbjct: 859  VVL--LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 916

Query: 455  LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
            +FE + +K  V WNS+I G  QN  S +A   F +M          T ++ + +C+++G 
Sbjct: 917  VFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGW 976

Query: 515  LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
            +  G+ +H   +  G+  D+ +  AL  +YA+ G      +VF  M E + VSW+++I  
Sbjct: 977  IMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA 1036

Query: 575  YG-MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
                   ++ A   F +M+  G   + VTF+NIL A S S S+ E     +A+ + + + 
Sbjct: 1037 LSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVS-SLSLHEVSHQIHALVLKYCLS 1095

Query: 633  PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC----RIHKRIDVM 686
             D      ++    + G++    K+   M    +   W ++++G      +HK +D++
Sbjct: 1096 DDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLV 1153



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 62/99 (62%)

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E+ + +H + I YG   ++++   L ++Y + GDL +AQ++FD MS RN+V+W+ +I  Y
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             +G+ ++A + F+ M+ +G  PN   F + L AC  SG
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659


>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 207/736 (28%), Positives = 375/736 (50%), Gaps = 13/736 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L +  ++HA L++T        +  L+  Y++  +   +  +FD     +   W  LI  
Sbjct: 64  LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 123

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           ++      ++  +++ M       +   +  +LRAC++      G ++HG +++CG +++
Sbjct: 124 HLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLERE 183

Query: 130 DVIQTSILCTYGEFGC-LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
               +S++  Y + G  L DA +VF  +  RDVV+W+ +I+ +  N D     ++F  M 
Sbjct: 184 KFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMW 243

Query: 189 RE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            E G++PD +T  SL + C     L     IHG V +   ++D  + ++ + +Y+KC D+
Sbjct: 244 EEQGLKPDRITFASLLKCCS---VLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDV 300

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            S  + F  +EK+    W++MIS Y  +   ++A+  F  M   + + +   L + L +C
Sbjct: 301 SSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKAC 360

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
             +  L  G  VH  +I+ G   +  ++   L+  YA  G++ + EK+   I +++I++W
Sbjct: 361 VEIEDLNTGVQVHGLMIKNGHQNDC-FVASVLLNLYASFGELGDVEKLFSRIDDKDIVAW 419

Query: 368 NMLISEYARKGMS-KEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           N +I   AR G      ++L  +++ T  L     ++ + L +C     L  G QIH  +
Sbjct: 420 NSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLI 479

Query: 426 IKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K   C+   V ++L+ MYS+C   + A+  F  I +K    W+S+I    QN    +A+
Sbjct: 480 VKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKAL 539

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            L  +M    +     +    I ACS +  + +GK +H   I  G   D+YI +++ DMY
Sbjct: 540 ELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMY 599

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           AKCG+++ +++VFD   + N V+++A+I  Y  HG+   A  +  ++  +G+ PN VTF+
Sbjct: 600 AKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFL 659

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            ++ ACSH+G VEE    F  M   + ++P  +HY+C+VD   R+G +E A++++     
Sbjct: 660 ALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK--- 716

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
             + S W  LL+ CR H    + +    ++     +D+  Y LLSNIY EEGNW+E    
Sbjct: 717 DGSESAWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNC 776

Query: 724 RSIMEVTGLKKVPGYS 739
           R  M    +KK PG S
Sbjct: 777 RKKMAKIRVKKDPGNS 792



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 253/482 (52%), Gaps = 9/482 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L + C+ L ++ ++H  +   G   D    + +++ YA+   + S R +FD+ ++ D+F+
Sbjct: 258 LLKCCSVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFV 317

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W+ +I  Y  NN  EE++  +  M R++  +   +  S L+AC  + DL +G +VHG +I
Sbjct: 318 WSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMI 377

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS-IIASYFDNADVSEGL 181
           K G   D  + + +L  Y  FG L D  K+F ++  +D+V+W+S I+A           +
Sbjct: 378 KNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCM 437

Query: 182 KMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++F  + R   ++    T++++ ++C +   L   R IH  +++  +     +GN+ + M
Sbjct: 438 QLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHM 497

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YS+C  +  A + FV I ++  +SW+++I    ++    KALE   +ML+        +L
Sbjct: 498 YSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSL 557

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
              + +C+ L  + EGK +H   I+ G   +  Y+G ++I+ YA+CG + E EKV     
Sbjct: 558 PLCISACSQLLTISEGKQLHVFAIKSGYSCDV-YIGSSIIDMYAKCGNIEESEKVFDEQL 616

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           + N +++N +IS YA  G +++A+E+L +++  G+ P+  +  + +SAC + G ++    
Sbjct: 617 KPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSH 676

Query: 421 IHGHVI---KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           +   ++   KI  K E   S L+D Y + G    AY + ++   +S   W +++     +
Sbjct: 677 LFTLMLDKYKIKPKSEHY-SCLVDAYGRAGRLEEAYQIVQKDGSESA--WRTLLSACRNH 733

Query: 478 GN 479
            N
Sbjct: 734 SN 735



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 57/111 (51%)

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           FL ++   SN   L +   +H +LI        ++   L   Y+K  +   A ++FD M 
Sbjct: 51  FLLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMP 110

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
            RNVV+W+ +I  +  +G ++ A  +F  M  S  +PNE TF  +L AC++
Sbjct: 111 NRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTN 161


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/654 (31%), Positives = 339/654 (51%), Gaps = 23/654 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++LR C    D  S + +H  I+K G   D      +L  Y + G   DA  +FD+M 
Sbjct: 52  YGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRP 214
            R+ VS+ ++   Y       + + ++  + REG E +   F + L L        SL  
Sbjct: 112 ERNNVSYVTLTQGY----ACQDPVGLYSRLHREGHELNPHVFTSFLKL------FVSLDK 161

Query: 215 ARS---IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           A     +H  +++     +  +G + I  YS CG + SA   F  I  +    W  ++SC
Sbjct: 162 AEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSC 221

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK--GMG 329
           Y  +G F+ +L+   +M      PN  T  T L +  GLG     KSVH QI++    + 
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELD 281

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           P    +G  L++ Y + G MS+  KV + + + +++ W+ +I+ + + G   +A+++ ++
Sbjct: 282 PR---VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIR 338

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGF 448
           M+   ++P+ F+++S L+ C       LG Q+HG V+K+    D +V ++LID+Y+KC  
Sbjct: 339 MREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEK 398

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + A  LF  +  K+VV WN++I G+   G   +A+N+F +   N + + EVTF +A+ A
Sbjct: 399 MDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGA 458

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+++  +E G  VH   I     K + +  +L DMYAKCGD++ AQ VF+ M   +V SW
Sbjct: 459 CASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASW 518

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +A+I  Y  HG    A  +F  M  S  KPN +TF+ +L  CS++G +++G+  F +M  
Sbjct: 519 NALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMIC 578

Query: 629 -FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
             G+EP L+HY CMV L  RSG ++ A  +I  +P+  +  IW A+L+        +  +
Sbjct: 579 DHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFAR 638

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +E+      D   Y LLSN+YA    W     +R  M+  G+KK PG S I
Sbjct: 639 RSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWI 692



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 231/465 (49%), Gaps = 16/465 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH+ ++  G   +      LI +Y+  GS+ S+R VF+     D  +WA ++ CY+ N  
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           FE+S+ L  +M  +    +N+ + + L+A   LG     + VHG+I+K  ++ D  +   
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVG 287

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEP 194
           +L  Y + G + DA KVF++M   DVV WS +IA +  N   ++ + +F  M REG V P
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM-REGFVVP 346

Query: 195 DFVTMLSLAEAC--GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +  T+ S+   C  G+   L     +HG V++    +D  + N+ I +Y+KC  + +A +
Sbjct: 347 NEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVK 404

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++  +   SW  +I  Y   G   KAL  F + L  +     +T  + LG+CA L  
Sbjct: 405 LFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLAS 464

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           +  G  VH   I+         +  +LI+ YA+CG +   + V + +   ++ SWN LIS
Sbjct: 465 MELGVQVHGLAIKTNNAKRV-AVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALIS 523

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ-----IHGHVIK 427
            Y+  G+ ++AL +   M+     P+  +    LS C N G +  G       I  H I+
Sbjct: 524 GYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIE 583

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
             C + +  + ++ ++ + G  + A  L E I  + SV++W +M+
Sbjct: 584 -PCLEHY--TCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAML 625



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 210/420 (50%), Gaps = 18/420 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L T    DP     L++ Y ++G +  +  VF+   + D   W+ +I  +  N F
Sbjct: 269 VHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328

Query: 76  FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             +++ ++ +M RE   + N F   S+L  C+     G GE++HG ++K GFD D  +  
Sbjct: 329 CNKAVDIFIRM-REGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSN 387

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y +   +D A K+F +++S++VVSW+++I  Y +  +  + L MF   +R  V  
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSV 447

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
             VT  S   AC  L S+     +HG  ++        + NS I MY+KCGD+  A+  F
Sbjct: 448 TEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVF 507

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++E     SW A+IS Y+  G  ++AL  F  M     +PN +T + VL  C+  G + 
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLID 567

Query: 315 EGKS-VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLIS 372
           +G+      I   G+ P  ++    ++  +   G++ +   +I  I  E +++ W  ++S
Sbjct: 568 QGQDCFESMICDHGIEPCLEHY-TCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLS 626

Query: 373 --------EYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
                   E+AR+  ++E L++  + + T+ L+ + ++ A   +   NV S++  ++  G
Sbjct: 627 ASMNQYNEEFARRS-AEEILKINPKDEATYVLLSNMYAGAKQWA---NVASIRKSMKEKG 682



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 4/194 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH  ++  G   D   S  LI+ YA+   + ++  +F      +   W  +I  Y   N
Sbjct: 369 QLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGY--EN 426

Query: 75  FFE--ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
             E  +++ ++ + +R Q +++   + S L AC+SL  +  G +VHG  IK    K   +
Sbjct: 427 LGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAV 486

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             S++  Y + G +  A+ VF++M + DV SW+++I+ Y  +    + L++F  M     
Sbjct: 487 SNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDC 546

Query: 193 EPDFVTMLSLAEAC 206
           +P+ +T L +   C
Sbjct: 547 KPNGLTFLGVLSGC 560


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 198/588 (33%), Positives = 308/588 (52%), Gaps = 19/588 (3%)

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           SR+V  W  +  SY        G+  FH        PD   +L+ A    +L SL+ A  
Sbjct: 71  SREVAFWLQLFTSY------QSGVPKFHQF---SSVPDLKHLLNNA---AKLKSLKHATQ 118

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT--SWTAMISCYNRS 275
           IH  ++           N+ +++Y+KCG +      F       T   +WT +I+  +RS
Sbjct: 119 IHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRS 178

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
               +AL  F +M      PN  T   +L +CA    L EG+ +H  +I K       ++
Sbjct: 179 NKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHA-LIHKHCFLNDPFV 237

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++ YA+CG M   E V   +  RN++SWN +I  + +  +   A+ +  ++ + G 
Sbjct: 238 ATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG- 296

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYL 454
            PD  S++S LSAC  +  L  G Q+HG ++K       +V++SL+DMY KCG    A  
Sbjct: 297 -PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATK 355

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           LF     + VV WN MI G ++  N  +A   F  M    +E DE ++ +   A ++I  
Sbjct: 356 LFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAA 415

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L +G  +H  ++  G  K+  I ++L  MY KCG +  A +VF    E NVV W+AMI  
Sbjct: 416 LTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITV 475

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
           +  HG  N+A  LF++ML+ G+ P  +TF+++L ACSH+G +++G  YFN+M  +  ++P
Sbjct: 476 FHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKP 535

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
            L+HYACMVDLL R G +E A + I SMPF  +  +WGALL  C  H  +++ + + + L
Sbjct: 536 GLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERL 595

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                ++ G Y LLSNIY   G  +E  +VR +M + G++K  G S I
Sbjct: 596 FKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWI 643



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 230/476 (48%), Gaps = 10/476 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--FMWAVL 66
           +L+  T++H+ L+ T  H        L+  YA+ GS+  + L+F+T+  P +    W  L
Sbjct: 112 SLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTL 171

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I     +N   +++  +++M       ++F + ++L AC+    L  G+++H  I K  F
Sbjct: 172 INQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCF 231

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             D  + T++L  Y + G +  A  VFD+M  R++VSW+S+I  +  N      + +F  
Sbjct: 232 LNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFRE 291

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           ++  G  PD V++ S+  AC  L  L   + +HG +++R +     + NS + MY KCG 
Sbjct: 292 VLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGL 349

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
              A + F     R   +W  MI    R   F++A   F  M+    EP+  +  ++  +
Sbjct: 350 FEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHA 409

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
            A +  L +G  +H  +++ G   +   +  +L+  Y +CG M +  +V     E N++ 
Sbjct: 410 SASIAALTQGTMIHSHVLKTGH-VKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVC 468

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  +I+ + + G + EA++L  +M   G++P+  +  S LSAC + G +  G +    + 
Sbjct: 469 WTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMA 528

Query: 427 KIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
            +      ++  + ++D+  + G    A    E +  +   ++W +++  CG + N
Sbjct: 529 NVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHAN 584



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 194/384 (50%), Gaps = 18/384 (4%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H H  +     DP  +T L++ YA+ GS+  +  VFD     +   W  +I  ++ N  
Sbjct: 226 IHKHCFLN----DPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKL 281

Query: 76  FEESILLYHKMIR---EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           +  +I ++ +++    +Q +IS     SVL AC+ L +L  G++VHG I+K G      +
Sbjct: 282 YGRAIGVFREVLSLGPDQVSIS-----SVLSACAGLVELDFGKQVHGSIVKRGLVGLVYV 336

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           + S++  Y + G  +DA K+F     RDVV+W+ +I   F   +  +    F +M+REGV
Sbjct: 337 KNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGV 396

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           EPD  +  SL  A   + +L     IH HVL+     +  + +S + MY KCG +L A +
Sbjct: 397 EPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQ 456

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F + ++     WTAMI+ +++ G   +A++ F +ML     P  IT ++VL +C+  G 
Sbjct: 457 VFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGK 516

Query: 313 LREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNML 370
           + +G K  +       + P  ++    +++     G++ E  + I ++  E + L W  L
Sbjct: 517 IDDGFKYFNSMANVHNIKPGLEHYA-CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGAL 575

Query: 371 I---SEYARKGMSKEALELLVQMQ 391
           +    ++A   M +E  E L +++
Sbjct: 576 LGACGKHANVEMGREVAERLFKLE 599



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 7/198 (3%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LF +  ++  LT+   +H+H+L TG   +   S+ L+  Y + GS+  +  VF   KE +
Sbjct: 406 LFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHN 465

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +  +    E+I L+ +M+ E        + SVL ACS  G +  G K   
Sbjct: 466 VVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFN 525

Query: 120 RIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADV 177
            +      K  +   + +    G  G L++A +  + M    D + W +++ +   +A+V
Sbjct: 526 SMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANV 585

Query: 178 SEGLKMFHSMVREGVEPD 195
             G ++   + +  +EPD
Sbjct: 586 EMGREVAERLFK--LEPD 601


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/658 (31%), Positives = 327/658 (49%), Gaps = 10/658 (1%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           + +  Y  +++  +  G L  G+  H  +IK  F     +  ++L  Y + G  D A+K+
Sbjct: 17  LDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKL 76

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD+M  R+VVSW+S+I+ Y       E + +F       +  D  T  +    CG    L
Sbjct: 77  FDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDL 136

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           R  R IH  +    +     L NS I MY KCG +  A   F   ++  + SW ++I+ Y
Sbjct: 137 RLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGY 196

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG--LGWLREGKSVHCQIIRKGMGP 330
            R G   + L   VKML      N   L + L +C       +  GK +H   ++ G+  
Sbjct: 197 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL 256

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS-----EYARKGMSKEALE 385
           +   +G AL++ YA+ G + +  K+   + + N++ +N +I+     E      + EA+ 
Sbjct: 257 DV-VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 315

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
           L  +MQ+ G+ P  F+ +S L AC  + + + G QIH  + K + + DEF+ ++L+++YS
Sbjct: 316 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 375

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
             G        F    +  VV W S+I G  QNG     + LFH++  +  + DE T   
Sbjct: 376 LSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 435

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + AC+N+  ++ G+ +H   I  G+     I  +   MYAKCGD+ +A   F      +
Sbjct: 436 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 495

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +VSWS MI     HG   +A  LF+ M  SGI PN +TF+ +L ACSH G VEEG  YF 
Sbjct: 496 IVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFE 555

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            M+   G+ P+++H AC+VDLL R+G +  A   I    F  +  +W +LL+ CR+HK  
Sbjct: 556 IMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKAT 615

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           D  K + + +          Y LL NIY + G      ++R++M+  G+KK PG S I
Sbjct: 616 DTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWI 673



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 277/569 (48%), Gaps = 11/569 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+  Y + G    ++ +FD   + +   W  LI  Y    F+ E + L+ +       + 
Sbjct: 60  LLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLD 119

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F + + L  C    DL  G  +H  I   G     ++  S++  Y + G +D AR VF+
Sbjct: 120 KFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFE 179

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE--LCSL 212
                D VSW+S+IA Y       E L++   M+R G+  +   + S  +ACG     S+
Sbjct: 180 SADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSI 239

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
              + +HG  ++  + +D  +G + +  Y+K GDL  A + F  +       + AMI+ +
Sbjct: 240 ECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGF 299

Query: 273 NR-----SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
            +       +  +A+  F +M     +P+  T  ++L +C+ +     GK +H QI +  
Sbjct: 300 LQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYN 359

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +  + +++G AL+E Y+  G + +  K  H+  + +++SW  LI  + + G  +  L L 
Sbjct: 360 LQSD-EFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLF 418

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKC 446
            ++   G  PD F+++  LSAC N+ +++ G QIH + IK    +   +Q+S I MY+KC
Sbjct: 419 HELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKC 478

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  + A + F+  +   +V W+ MI    Q+G + EA++LF  M  + +  + +TFL  +
Sbjct: 479 GDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVL 538

Query: 507 QACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR-VFDSMSERN 564
            ACS+ G +E+G ++       +G+  ++     + D+  + G L  A+  + DS  E +
Sbjct: 539 VACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGD 598

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            V W +++    +H   +    + +++++
Sbjct: 599 PVMWRSLLSACRVHKATDTGKRVAERVIE 627



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 251/481 (52%), Gaps = 27/481 (5%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHG-----HVLRRKIKIDGPLGNSFIVMYSKCG 245
           G+  D VT   L +     CS R    IHG     H+++   K    L N+ + MY KCG
Sbjct: 14  GLPLDSVTYTKLVQ-----CSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCG 68

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           +   A++ F ++ KR   SW ++IS Y + G++ + +  F +        +  T    L 
Sbjct: 69  ETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALS 128

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
            C     LR G+ +H  I   G+G     L  +LI+ Y +CG++     V  +  E + +
Sbjct: 129 VCGRTLDLRLGRLIHALITVSGLGGPV-LLTNSLIDMYCKCGRIDWARLVFESADELDSV 187

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN--VGSLQLGLQIHG 423
           SWN LI+ Y R G + E L LLV+M   GL  +S+++ S+L ACG+    S++ G  +HG
Sbjct: 188 SWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHG 247

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ-----N 477
             +K+    D  V ++L+D Y+K G    A  +F+ +   +VVM+N+MI GF Q     +
Sbjct: 248 CAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMAD 307

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
             + EA+ LF +M    ++  E TF + ++ACS I   E GK +H ++  Y ++ D +I 
Sbjct: 308 EFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG 367

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL ++Y+  G ++   + F S  + +VVSW+++I  +  +GQ     +LF ++L SG K
Sbjct: 368 NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRK 427

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD----LLSRSGDIEG 653
           P+E T   +L AC++  +V+ G+     +  + ++  + ++  + +    + ++ GDI+ 
Sbjct: 428 PDEFTISIMLSACANLAAVKSGE----QIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDS 483

Query: 654 A 654
           A
Sbjct: 484 A 484



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 238/476 (50%), Gaps = 17/476 (3%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +LR    +HA + V+GL      +  LI+ Y + G +  +RLVF++  E DS  W  LI 
Sbjct: 135 DLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIA 194

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS--LGDLGSGEKVHGRIIKCGF 126
            Y+     +E + L  KM+R    ++++   S L+AC S     +  G+ +HG  +K G 
Sbjct: 195 GYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL 254

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD---NAD--VSEGL 181
           D D V+ T++L TY + G L+DA K+F  M   +VV ++++IA +      AD   +E +
Sbjct: 255 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 314

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +F  M   G++P   T  S+ +AC  + +    + IH  + +  ++ D  +GN+ + +Y
Sbjct: 315 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 374

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           S  G +    + F    K    SWT++I  + ++G F+  L  F ++L    +P+  T+ 
Sbjct: 375 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 434

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            +L +CA L  ++ G+ +H   I+ G+G  +  +  + I  YA+CG +            
Sbjct: 435 IMLSACANLAAVKSGEQIHAYAIKTGIG-NFTIIQNSQICMYAKCGDIDSANMTFKETKN 493

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            +I+SW+++IS  A+ G +KEA++L   M+  G+ P+  +    L AC + G ++ GL+ 
Sbjct: 494 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 553

Query: 422 -----HGHVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMI 471
                  H I  + K     + ++D+  + G        + +   +   VMW S++
Sbjct: 554 FEIMKKDHGITPNVKH---SACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLL 606



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 183/365 (50%), Gaps = 10/365 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY----- 70
           LH   +  GL  D    T L+++YA++G L  +  +F    +P+  M+  +I  +     
Sbjct: 245 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMET 304

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
           M + F  E++ L+ +M       S F + S+L+ACS++     G+++H +I K     D+
Sbjct: 305 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE 364

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            I  +++  Y   G ++D  K F      DVVSW+S+I  +  N     GL +FH ++  
Sbjct: 365 FIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFS 424

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G +PD  T+  +  AC  L +++    IH + ++  I     + NS I MY+KCGD+ SA
Sbjct: 425 GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 484

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
             TF + +     SW+ MIS   + G  ++A++ F  M      PN IT + VL +C+  
Sbjct: 485 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHG 544

Query: 311 GWLREGKSVHCQIIRK--GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSW 367
           G + EG   + +I++K  G+ P   +    +++     G+++E E  I   G E + + W
Sbjct: 545 GLVEEGLR-YFEIMKKDHGITPNVKH-SACIVDLLGRAGRLAEAESFIMDSGFEGDPVMW 602

Query: 368 NMLIS 372
             L+S
Sbjct: 603 RSLLS 607



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 156/388 (40%), Gaps = 54/388 (13%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+ +       ++HA +    L  D      L+E Y+  GS+      F +  + D
Sbjct: 335 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLD 394

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  ++ N  FE  + L+H+++        F    +L AC++L  + SGE++H 
Sbjct: 395 VVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHA 454

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK G     +IQ S +C Y + G +D A   F +  + D+VSWS +I+S   +    E
Sbjct: 455 YAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKE 514

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGE-------LCSLRPARSIHGHVLRRK-----I 227
            + +F  M   G+ P+ +T L +  AC         L      +  HG     K     +
Sbjct: 515 AVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIV 574

Query: 228 KIDGPLGN-----SFIVMYSKCGD------LLSAERT-------------FVKIEKRCTT 263
            + G  G      SFI+     GD      LLSA R               +++E     
Sbjct: 575 DLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAA 634

Query: 264 SWTAMISCYNRSGWFQKALE--SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
           S+  + + YN +G    A E  + +K   VK+EP             GL W+  G  VH 
Sbjct: 635 SYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEP-------------GLSWIEVGNVVHS 681

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKM 349
            +      P    +   L E   E  K+
Sbjct: 682 FVAGDRSHPNSQVIYVQLEEMLEEIKKL 709



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 3/216 (1%)

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           Q Y   L +D VT+   +Q  +  G L  GK  H  +I    +  +++   L  MY KCG
Sbjct: 9   QPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCG 68

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           +   A+++FD M +RNVVSW+++I  Y   G  ++  +LFK+   S ++ ++ TF N L 
Sbjct: 69  ETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALS 128

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
            C  +  +  G+     + + G+   +     ++D+  + G I+ A +++       +  
Sbjct: 129 VCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA-RLVFESADELDSV 187

Query: 669 IWGALLNG-CRIHKRIDVMKTIEKELSVTGTNDNGY 703
            W +L+ G  RI    ++++ + K L   G N N Y
Sbjct: 188 SWNSLIAGYVRIGSNDEMLRLLVKMLR-HGLNLNSY 222


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 204/655 (31%), Positives = 338/655 (51%), Gaps = 17/655 (2%)

Query: 87  IREQATISNFIYPSV-LRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFG 144
           + EQ   S F+ P+  +      GD+ + + +   I     F  D ++   ++  YG+ G
Sbjct: 71  LEEQNQKSGFVDPAAYVSLLKQSGDVTALKTIQAHISHSKRFAGDRLLLNCVVEAYGKCG 130

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
           C+ DAR VF  +   +V SW+ ++A+Y  N      L++   M   GV P+ VT+ ++  
Sbjct: 131 CVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIG 190

Query: 205 ACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           A  EL +   AR IH       ++  D  L  + I MY+KCGD+  AE  F +   +   
Sbjct: 191 AVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLA 250

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
              AMIS Y + G+   A+ +F ++     +PN +T   +  +CA  G   + +  H   
Sbjct: 251 CCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCF 310

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I   + P+   +  AL+  Y+ CG + +  +V   +  +N+++WN++I+ YA++G + EA
Sbjct: 311 ILSKLRPDV-VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEA 369

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDM 442
           L+L V M+  G+ PD  +  + L +C     L  G  IH HV+         V S+LI M
Sbjct: 370 LQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITM 429

Query: 443 YSKCGFKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           YS CG    A  +F +      SV+ W +M+    +NG    A+ LF +M L  +  + V
Sbjct: 430 YSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVV 489

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TF++ I ACS+IG L +G  +  ++I  G   D+ + T+L ++Y KCG L  A  VF  +
Sbjct: 490 TFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYL 549

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           S +N+V+W+ ++     +G+   +  L ++M   G +PNE+T +N+L+ CSH+G V +  
Sbjct: 550 SFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAV 609

Query: 621 FYFNAMRIFG--VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
            YF +M ++G  + P  +HY C+VDLL RSG +E     I S PF  +  +W +LL  C 
Sbjct: 610 SYFRSM-VYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCV 668

Query: 679 IHKRIDVMKTIEKELSVTGTN--DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           IH   DV + +     V G +  +   Y LLSN++A  G  D    V+S+ ++ G
Sbjct: 669 IHS--DVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLD---AVKSLAKLAG 718



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 292/645 (45%), Gaps = 55/645 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRL-----IESYAEMGSLRSSRLVFDTF 55
           + L +   ++  L  + AH+     H    A  RL     +E+Y + G ++ +RLVF + 
Sbjct: 87  VSLLKQSGDVTALKTIQAHIS----HSKRFAGDRLLLNCVVEAYGKCGCVKDARLVFSSI 142

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           + P+ + W +L+  Y  N   +  + L  +M       +     +V+ A S LG+     
Sbjct: 143 RHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEAR 202

Query: 116 KVHGRIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           K+H R    C    D V+ T+++  Y + G +  A  VFD+  ++D+   +++I++Y   
Sbjct: 203 KIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQL 262

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
               + +  F+ +   G++P+ VT   L  AC        AR  H   +  K++ D  + 
Sbjct: 263 GYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVN 322

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            + + MYS+CG L  A R F ++  +   +W  MI+ Y + G+  +AL+ +V M     E
Sbjct: 323 TALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVE 382

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ IT + VL SC+    L  G+ +H  ++  G       L  ALI  Y+ CG + +   
Sbjct: 383 PDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLS-ALITMYSACGSLGDAVD 441

Query: 355 VIH--AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
           V H       +++SW  +++   R G  + AL L  +M   G+  +  +  S++ AC ++
Sbjct: 442 VFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSI 501

Query: 413 GSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           G+L  G  I   VI      D  + +SLI++Y KCG  + A  +F  +  K++V WN+++
Sbjct: 502 GALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTIL 561

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
               QNG    +  L  +M L+  + +E+T L  +  CS+ G + K        +SY   
Sbjct: 562 AASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKA-------VSY--- 611

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
                    + +Y  C             SE     +  ++D  G  GQL +  +     
Sbjct: 612 -------FRSMVYGHC---------LVPTSEH----YGCLVDLLGRSGQLEEVEAFISS- 650

Query: 592 LDSGIKP---NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
                KP   + V +M++L +C     VE G     A R+ G++P
Sbjct: 651 -----KPFSLDSVLWMSLLGSCVIHSDVERG--LRAARRVLGLDP 688


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 198/712 (27%), Positives = 361/712 (50%), Gaps = 6/712 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I + A  G L  +  +      P +  W  +I  +  +      + LY  M       +
Sbjct: 265 IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPT 324

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              + S+L A +++     G+++H   +  G D +  + +S++  Y + GC  DA+ VFD
Sbjct: 325 RSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD 384

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
               +++V W++++  +  N    E ++MF  M+R  ++ D  T +S+  AC  L S   
Sbjct: 385 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + +H   ++  + I   + N+ + MYSK G +  A+  F  I  + + SW A+     +
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +   ++A+    +M      P+ ++  T + +C+ +     GK +HC  I+ G+   +  
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH-A 563

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G +LI+ Y++ G +    K+   +   +I+  N LI+ + +     EA++L  Q+   G
Sbjct: 564 VGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDG 623

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCG-FKNL 451
           L P S + +S LS C    +  +G Q+H + +K  +   D  +  SL  +Y K    ++ 
Sbjct: 624 LKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDA 683

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             LL E    K++  W ++I G+ QNG    ++  F +M    +  DE TF + ++ACS+
Sbjct: 684 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 743

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSA 570
           +     GK +H  +   G        +AL DMY+KCGD+ ++   F  + ++++++ W++
Sbjct: 744 VTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IF 629
           MI  +  +G  ++A  LF++M +  IKP+EVTF+ +L AC+HSG + EG+ +F +MR ++
Sbjct: 804 MIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVY 863

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
           G+ P L HYAC +DLL R G ++ A + I  +PF  +G +W   L  CR+HK  +  K  
Sbjct: 864 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIA 923

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++L       +  Y LLS+++A  GNW E    R  M   G+ K PG S I
Sbjct: 924 ARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/579 (29%), Positives = 284/579 (49%), Gaps = 40/579 (6%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           VL ACS +G L  G +VH  ++K GF      + +++  Y + G + +AR+VFD +   D
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            + WSS+IA Y       E L +F  M + G  PD VT++++                  
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI------------------ 265

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
                            I   +  G L  A     K+    T +W A+IS + +SG    
Sbjct: 266 -----------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            L  +  M      P   T  ++L + A +    EG+ +H   +  G+     ++G +LI
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANV-FVGSSLI 367

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             YA+CG  S+ + V     E+NI+ WN +++ + +  + +EA+ +   M  + L  D F
Sbjct: 368 NLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKD--EFVQSSLIDMYSKCGFKNLAYLLFER 458
           +  S L AC  + S  LG Q+H   IK +C D   FV ++ +DMYSK G    A  LF  
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFVANATLDMYSKYGAIGDAKALFSL 486

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           I  K  + WN++  G  QN    EA+ +  +M L+ +  D+V+F TAI ACSNI   E G
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 546

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K +H   I YG+  +  + ++L D+Y+K GD+++++++F  +   ++V  +A+I  +  +
Sbjct: 547 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 606

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQH 637
              ++A  LF+Q+L  G+KP+ VTF +IL  CS S +   GK  +   ++   +  D   
Sbjct: 607 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLL 666

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              +  +  +S  +E A K++  MP   N   W A+++G
Sbjct: 667 GVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 308/623 (49%), Gaps = 8/623 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA  ++ GL  +    + LI  YA+ G    ++ VFD   E +  MW  ++  ++ N 
Sbjct: 346 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNE 405

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE+I ++  M+R       F + S+L AC+ L     G++VH   IK   D    +  
Sbjct: 406 LPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 465

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  Y ++G + DA+ +F  +  +D +SW+++      N +  E + M   M   G+ P
Sbjct: 466 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 525

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D V+  +   AC  + +    + IH   ++  I  +  +G+S I +YSK GD+ S+ + F
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +++        A+I+ + ++    +A++ F ++L+   +P+ +T  ++L  C+G     
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISE 373
            GK VHC  ++ G+  +   LG +L   Y +   + +  K++  + + +N+  W  +IS 
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD- 432
           YA+ G    +L    +M+   +  D  + AS L AC +V +   G +IHG + K      
Sbjct: 706 YAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 765

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM-WNSMICGFYQNGNSLEAINLFHQMY 491
           E   S+LIDMYSKCG    ++  F+ ++ K  +M WNSMI GF +NG + EA+ LF +M 
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 825

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
              ++ DEVTFL  + AC++ G + +G+     +   YG+   +       D+  + G L
Sbjct: 826 ELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHL 885

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN-EVTFMNILW 608
           Q AQ   D +  R + V W+  +    MH          +++++  ++P    T++ +  
Sbjct: 886 QEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVE--LEPQYSSTYVLLSS 943

Query: 609 ACSHSGSVEEGKFYFNAMRIFGV 631
             + +G+  E K    +MR  GV
Sbjct: 944 LHAATGNWAEAKVTRESMREKGV 966



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 310/665 (46%), Gaps = 39/665 (5%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ +G          L++ YA+ G + ++R VFD    PD+  W+ +I CY    
Sbjct: 179 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 238

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            ++E++ L+ +M                                    K G   D V   
Sbjct: 239 CYQEALALFSRM-----------------------------------DKMGSAPDQVTLV 263

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +I+ T    G LD A  +  KM +   V+W+++I+ +  +      L ++  M   G+ P
Sbjct: 264 TIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWP 323

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              T  S+  A   + +    + +H   +   +  +  +G+S I +Y+KCG    A+  F
Sbjct: 324 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
               ++    W AM++ + ++   ++A+  F  M+    + +  T +++LG+C  L    
Sbjct: 384 DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFY 443

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK VHC  I+  M     ++  A ++ Y++ G + + + +   I  ++ +SWN L    
Sbjct: 444 LGKQVHCVTIKNCMDISL-FVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGL 502

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
           A+    +EA+ +L +M+  G+ PD  S +++++AC N+ + + G QIH   IK   C + 
Sbjct: 503 AQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH 562

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V SSLID+YSK G    +  +F ++   S+V  N++I GF QN N  EAI LF Q+  +
Sbjct: 563 AVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD 622

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV-RKDIYIDTALTDMYAKCGDLQT 552
            L+   VTF + +  CS       GK VH   +  GV   D  +  +L  +Y K   L+ 
Sbjct: 623 GLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLED 682

Query: 553 AQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           A ++   M + +N+  W+A+I  Y  +G  + +   F +M    ++ +E TF ++L ACS
Sbjct: 683 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACS 742

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
              +  +GK     +   G        + ++D+ S+ GD+  +F+    +    +   W 
Sbjct: 743 DVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWN 802

Query: 672 ALLNG 676
           +++ G
Sbjct: 803 SMIVG 807



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 216/462 (46%), Gaps = 37/462 (8%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R++HG +LR    + G LG+S + +Y K G +  A        +R + + ++++SC+ RS
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 276 GWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           G     L +F  +       P+   L  VL +C+ +G L  G+ VHC +++ G      +
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV-F 194

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
              AL++ YA+CG +    +V   I   + + W+ +I+ Y R G  +EAL L  +M   G
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMG 254

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
             PD  ++ + +S   + G L                                  + A  
Sbjct: 255 SAPDQVTLVTIISTLASSGRL----------------------------------DHATA 280

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           L +++   S V WN++I G  Q+G     + L+  M    L     TF + + A +N+  
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
             +G+ +H   + +G+  ++++ ++L ++YAKCG    A+ VFD   E+N+V W+AM+  
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +  +    +A  +F+ M+   ++ +E TF++IL AC++  S   GK          ++  
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 460

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           L      +D+ S+ G I  A  +   +P+  + S W AL  G
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS-WNALTVG 501



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 13/285 (4%)

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL-- 495
           SL+++Y K G    A+       +++    +S++    ++G+  + +  F   Y+ C   
Sbjct: 96  SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFR--YIRCTAG 153

Query: 496 -EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
              D+      + ACS +G L  G+ VH  ++  G    ++ + AL DMYAKCGD+  A+
Sbjct: 154 GRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNAR 213

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           RVFD ++  + + WS+MI CY   G   +A +LF +M   G  P++VT + I+   + SG
Sbjct: 214 RVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG 273

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---DIEGAFKMIHSMPFPANGSIWG 671
            ++        M      P    +  ++   ++SG   ++ G +K + S       S + 
Sbjct: 274 RLDHATALLKKMPT----PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFA 329

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEG 715
           ++L+     K     + +     + G + N +  + L N+YA+ G
Sbjct: 330 SMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCG 374


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 207/666 (31%), Positives = 351/666 (52%), Gaps = 77/666 (11%)

Query: 134 TSILCTYGEFGCLDDARKVFDKMTS---RDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           T+++ TY     + +A  + +K  +     V  W+ +I         +  L++F  M   
Sbjct: 61  TNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTL 120

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
              PD  T   + +ACGE+ +     SIHG V+R   + +  + N+ I MY KC  ++ A
Sbjct: 121 HWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHA 180

Query: 251 ERTFVKIEKR--C-TTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGS 306
            + F ++  R  C + +W +++S Y+       A+  F +M +     P+ + ++ +L  
Sbjct: 181 RKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPV 240

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C  LG    G+ VH   +R G+  E  ++G AL++ YA+CGKM +  KV   +  +++++
Sbjct: 241 CGYLGLGLCGRQVHGFCVRSGL-VEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVT 299

Query: 367 WNMLISEYARKGMSKEALELLVQMQ---------TWGLM--------------------- 396
           WN +++ Y++ G  ++AL L  +M+         TW  +                     
Sbjct: 300 WNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMC 359

Query: 397 -----PDSFSVASSLSACGNVGSLQLGLQIHGHVIKI--------DCKDEFVQSSLIDMY 443
                P+  ++ S LSAC +VG+L  G + H + +K         D  D  V ++LIDMY
Sbjct: 360 GCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMY 419

Query: 444 SKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL--NCLEMDE 499
           +KC    +A  +F+ I  + + VV W  MI G+ Q+G++  A+ LF +M+   NC+  ++
Sbjct: 420 AKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPND 479

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD------IYIDTALTDMYAKCGDLQTA 553
            T    + AC+ +  L+ GK +H    +Y +R+       +++   L DMY+K GD+ TA
Sbjct: 480 FTISCVLMACARLAALKFGKQIH----AYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTA 535

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           Q VFDSMS+RN VSW++++  YGMHG+  DA  +F +M    +  + +TF+ +L+ACSHS
Sbjct: 536 QVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHS 595

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
           G              FGV+P ++HYACMVDLL R+G +  A ++I+ MP      +W AL
Sbjct: 596 G------------MDFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIAL 643

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CRIH   ++ +   K+L     +++G YTLLSNIYA    W +  ++  +M+ TG+K
Sbjct: 644 LSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIK 703

Query: 734 KVPGYS 739
           K+PG+S
Sbjct: 704 KIPGWS 709



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/646 (26%), Positives = 314/646 (48%), Gaps = 69/646 (10%)

Query: 5   RSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--- 60
           + C  L +   LH   ++ G L       T LI +Y    S+ ++ L+ +    P     
Sbjct: 32  QQCKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSV 91

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           + W  LI+  +  N    ++ L+ +M     T  ++ +P V +AC  + +   G  +HG 
Sbjct: 92  YWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGC 151

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR---DVVSWSSIIASYFDNADV 177
           +I+ GF+ +  +  +++  YG+   +  ARKVFD++  R   D V+W+SI++ Y      
Sbjct: 152 VIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVP 211

Query: 178 SEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           +  + +F  M V  G+ PD V ++++   CG L      R +HG  +R  +  D  +GN+
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA 271

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-- 294
            + MY+KCG +  A + F ++  +   +W AM++ Y+++G F+ AL  F KM E K E  
Sbjct: 272 LVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESD 331

Query: 295 ---------------------------------PNLITLITVLGSCAGLGWLREGKSVHC 321
                                            PN++TL+++L +CA +G L  GK  HC
Sbjct: 332 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHC 391

Query: 322 QIIRKGMGPEYD------YLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISE 373
             ++  +  E++       +  ALI+ YA+C  +     +   I   +R++++W ++I  
Sbjct: 392 YSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGG 451

Query: 374 YARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---KI 428
           YA+ G +  AL+L  +M      ++P+ F+++  L AC  + +L+ G QIH +V+   +I
Sbjct: 452 YAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRI 511

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           D    FV + LIDMYSK G  + A ++F+ + +++ V W S++ G+  +G S +A  +F 
Sbjct: 512 DSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFD 571

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M    L +D +TFL  + ACS+ G            + +GV   +     + D+  + G
Sbjct: 572 EMRKEALVLDGITFLVVLYACSHSG------------MDFGVDPGVEHYACMVDLLGRAG 619

Query: 549 DLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            L  A R+ + M  E   V W A++    +H     A    K++L+
Sbjct: 620 RLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLE 665


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 203/653 (31%), Positives = 339/653 (51%), Gaps = 21/653 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++LR C    D  S + +H  I+K G   D      +L  Y + G   DA  +FD+M 
Sbjct: 52  YGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEAC--GELCSL 212
            R+ VS+ ++   Y       + + ++  + REG E +   F + L L  +    E+C  
Sbjct: 112 ERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                +H  +++     +  +G + I  YS CG + SA   F  I  +    W  ++SCY
Sbjct: 168 -----LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG--MGP 330
             +G+F+ +L+    M      PN  T  T L +  GLG     K VH QI++    + P
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               +G  L++ Y + G MS+  KV + + + +++ W+ +I+ + + G   EA++L ++M
Sbjct: 283 R---VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
           +   ++P+ F+++S L+ C       LG Q+HG V+K+    D +V ++LID+Y+KC   
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A  LF  +  K+ V WN++I G+   G   +A ++F +   N + + EVTF +A+ AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +++  ++ G  VH   I     K + +  +L DMYAKCGD++ AQ VF+ M   +V SW+
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           A+I  Y  HG    A  +   M D   KPN +TF+ +L  CS++G +++G+  F +M R 
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
            G+EP L+HY CMV LL RSG ++ A K+I  +P+  +  IW A+L+        +  + 
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             +E+      D   Y L+SN+YA    W     +R  M+  G+KK PG S I
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 284/565 (50%), Gaps = 18/565 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L  G   D  A+  L+ +Y + G  + +  +FD   E ++  +  L + Y     
Sbjct: 71  IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC--- 127

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            ++ I LY ++ RE   ++  ++ S L+   SL        +H  I+K G+D +  +  +
Sbjct: 128 -QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y   G +D AR VF+ +  +D+V W+ I++ Y +N    + LK+   M   G  P+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  +  +A   L +   A+ +HG +L+    +D  +G   + +Y++ GD+  A + F 
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL-----GSCAGL 310
           ++ K     W+ MI+ + ++G+  +A++ F++M E    PN  TL ++L     G C+GL
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL 366

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
                G+ +H  +++ G   +  Y+  ALI+ YA+C KM    K+   +  +N +SWN +
Sbjct: 367 -----GEQLHGLVVKVGFDLDI-YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-D 429
           I  Y   G   +A  +  +     +     + +S+L AC ++ S+ LG+Q+HG  IK  +
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
            K   V +SLIDMY+KCG    A  +F  ++   V  WN++I G+  +G   +A+ +   
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCG 548
           M     + + +TFL  +  CSN G +++G+     +I  +G+   +   T +  +  + G
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600

Query: 549 DLQTAQRVFDSMS-ERNVVSWSAMI 572
            L  A ++ + +  E +V+ W AM+
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAML 625



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 251/541 (46%), Gaps = 15/541 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + LF S         LH+ ++  G   +      LI +Y+  GS+ S+R VF+     D 
Sbjct: 153 LKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI 212

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +WA ++ CY+ N +FE+S+ L   M       +N+ + + L+A   LG     + VHG+
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQ 272

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K  +  D  +   +L  Y + G + DA KVF++M   DVV WS +IA +  N   +E 
Sbjct: 273 ILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEA 332

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC--GELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + +F  M    V P+  T+ S+   C  G+   L     +HG V++    +D  + N+ I
Sbjct: 333 VDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALI 390

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y+KC  + +A + F ++  +   SW  +I  Y   G   KA   F + L  +     +
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  + LG+CA L  +  G  VH   I+     +   +  +LI+ YA+CG +   + V + 
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKV-AVSNSLIDMYAKCGDIKFAQSVFNE 509

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +   ++ SWN LIS Y+  G+ ++AL +L  M+     P+  +    LS C N G +  G
Sbjct: 510 METIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569

Query: 419 LQ-----IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMIC 472
            +     I  H I+  C + +  + ++ +  + G  + A  L E I  + SV++W +M+ 
Sbjct: 570 QECFESMIRDHGIE-PCLEHY--TCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
               N N+ E      +  L     DE T++      +   Q      +   +   GV+K
Sbjct: 627 A-SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKK 685

Query: 533 D 533
           +
Sbjct: 686 E 686


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 184/490 (37%), Positives = 287/490 (58%), Gaps = 13/490 (2%)

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW ++I+   R G   ++L +F  M ++  +PN  T    + SC+ L  L  GK  H Q 
Sbjct: 49  SWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQA 108

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           +  G   +  ++  ALI+ Y++CGK+S    +   I  RNI++W  LI+ Y +   + EA
Sbjct: 109 LVFGFESDL-FVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEA 167

Query: 384 LELLVQM---------QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
           L +  +          +  G   DS ++ S LSAC  V +  +   +HG  IK+      
Sbjct: 168 LMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVM 227

Query: 435 -VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-L 492
            V+++L+D Y+KCG  +L+  +F+ + +K VV WNSMI  + QNG S +A  +FH M   
Sbjct: 228 GVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKA 287

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
              + +EVT  T + AC++ G L  G  +H ++I  G   ++ + T++ DMY KCG  + 
Sbjct: 288 GGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEM 347

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A+  FD M E+NV SW+AMI  YGMHG   +A  +F QM+ +G+KPN +TF+++L ACSH
Sbjct: 348 ARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSH 407

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G +EEG  +FNAM   + VEP ++HY CMVDLL R+G I+ A+ +I SM    +  +WG
Sbjct: 408 AGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWG 467

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           +LL  CRIHK +++ +   +EL     ++ GYY LL+NIYA+ G W +  ++R +++  G
Sbjct: 468 SLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRG 527

Query: 732 LKKVPGYSTI 741
           L K PGYS +
Sbjct: 528 LVKPPGYSLV 537



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 218/435 (50%), Gaps = 20/435 (4%)

Query: 55  FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
           F   D + W  LI          ES+  +  M +     +   +P  +++CS+L DL SG
Sbjct: 42  FDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSG 101

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           ++ H + +  GF+ D  + ++++  Y + G L +AR +FD++  R++V+W+S+I  Y  N
Sbjct: 102 KQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQN 161

Query: 175 ADVSEGLKMFHSMVRE---------GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
            D  E L +F   + E         G   D V M+S+  AC  + +   +  +HG  +  
Sbjct: 162 DDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAI-- 219

Query: 226 KIKIDGPLG--NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           K+ +D  +G  N+ +  Y+KCG++  + + F  + ++   SW +MI+ Y ++G    A E
Sbjct: 220 KVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFE 279

Query: 284 SFVKMLEV-KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
            F  ML+    + N +TL T+L +CA  G LR G  +H Q+I+ G       +  ++I+ 
Sbjct: 280 VFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV-IMATSIIDM 338

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           Y +CG+          + E+N+ SW  +I+ Y   G ++EAL++  QM   G+ P+  + 
Sbjct: 339 YCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITF 398

Query: 403 ASSLSACGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI 459
            S L+AC + G L+ G        H   ++   E     ++D+  + G+   AY L + +
Sbjct: 399 ISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH-YGCMVDLLGRAGYIKEAYNLIKSM 457

Query: 460 Q-QKSVVMWNSMICG 473
           + ++  V+W S++  
Sbjct: 458 KVRRDFVLWGSLLAA 472



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 199/383 (51%), Gaps = 16/383 (4%)

Query: 5   RSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           +SC+ L  L    + H   LV G   D   S+ LI+ Y++ G L ++R++FD     +  
Sbjct: 90  KSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIV 149

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQA---------TISNFIYPSVLRACSSLGDLG 112
            W  LI  Y+ N+   E+++++ + + E++         ++ +    SVL ACS + +  
Sbjct: 150 TWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKA 209

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
             E VHG  IK G DK   ++ ++L  Y + G +  +RKVFD M  +DVVSW+S+IA Y 
Sbjct: 210 VSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYA 269

Query: 173 DNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
            N   ++  ++FH M++ G  + + VT+ +L  AC    +LR    +H  V++     + 
Sbjct: 270 QNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV 329

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            +  S I MY KCG    A   F  ++++   SWTAMI+ Y   G+ ++AL+ F +M+  
Sbjct: 330 IMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389

Query: 292 KEEPNLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
             +PN IT I+VL +C+  G+L EG +  +       + P  ++ G  +++     G + 
Sbjct: 390 GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYG-CMVDLLGRAGYIK 448

Query: 351 ECEKVIHAIG-ERNILSWNMLIS 372
           E   +I ++   R+ + W  L++
Sbjct: 449 EAYNLIKSMKVRRDFVLWGSLLA 471



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 21/228 (9%)

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           NL  L  +   +  V  WNS+I    + G+S E++  F  M    ++ +  TF  AI++C
Sbjct: 33  NLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSC 92

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           S +  L  GK  H + + +G   D+++ +AL DMY+KCG L  A+ +FD +  RN+V+W+
Sbjct: 93  SALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWT 152

Query: 570 AMIDCYGMHGQLNDAASLFKQML---------DSGIKPNEVTFMNILWACSH--SGSVEE 618
           ++I  Y  +   ++A  +FK+ L         + G   + V  +++L ACS   + +V E
Sbjct: 153 SLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSE 212

Query: 619 G----KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           G           ++ GVE  L      +D  ++ G++  + K+   M 
Sbjct: 213 GVHGVAIKVGLDKVMGVENTL------LDAYAKCGEVSLSRKVFDDMA 254



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 9/152 (5%)

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDA 584
           IS+ + K+ +  TA     A   +L T   +F+   +R +V SW+++I      G   ++
Sbjct: 14  ISFKIHKNHFSTTAA----ATNTNLTT---LFNKYFDRTDVYSWNSLIAELARGGDSCES 66

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDL 644
              F  M    IKPN  TF   + +CS    +  GK       +FG E DL   + ++D+
Sbjct: 67  LRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDM 126

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            S+ G +  A  +   +P   N   W +L+ G
Sbjct: 127 YSKCGKLSNARVLFDEIP-RRNIVTWTSLITG 157


>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
 gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
 gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
 gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 686

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 201/673 (29%), Positives = 351/673 (52%), Gaps = 45/673 (6%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR C  +     GE +   +IK G  ++  I  +++  Y +F  L DA KVFD+M+ R++
Sbjct: 12  LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS-LAEACGELCSLRPARSIHG 220
           V+W+++++ Y  +   ++ ++++  M+    E     M S + +ACG +  ++    ++ 
Sbjct: 72  VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            + +  ++ D  L NS + MY K G L+ A  +F +I +  +TSW  +IS Y ++G   +
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191

Query: 281 ALESFVKMLEVKEEPNLIT----------------------------------LITVLGS 306
           A+  F +M     +PN+++                                  L   L +
Sbjct: 192 AVTLFHRM----PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA---IGERN 363
           C+  G L  GK +HC +++ G+     +   ALI+ Y+ CG +     V H        +
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGL-ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           +  WN ++S +     ++ AL LL+Q+    L  DS++++ +L  C N  +L+LGLQ+H 
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            V+    + D  V S L+D+++  G    A+ LF R+  K ++ ++ +I G  ++G +  
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A  LF ++    L+ D+      ++ CS++  L  GK +H   I  G   +    TAL D
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY KCG++     +FD M ER+VVSW+ +I  +G +G++ +A   F +M++ GI+PN+VT
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546

Query: 603 FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+ +L AC HSG +EE +     M+  +G+EP L+HY C+VDLL ++G  + A ++I+ M
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   + +IW +LL  C  HK   ++  I ++L     +D   YT LSN YA  G WD+  
Sbjct: 607 PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLS 666

Query: 722 KVRSIMEVTGLKK 734
           KVR   +  G K+
Sbjct: 667 KVREAAKKLGAKE 679



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 164/618 (26%), Positives = 284/618 (45%), Gaps = 47/618 (7%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            R C  ++   R   + AH++  G+  +   +  +I  Y +   L  +  VFD   E + 
Sbjct: 12  LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
             W  ++  Y  +    ++I LY +M+  E+   + F+Y +VL+AC  +GD+  G  V+ 
Sbjct: 72  VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131

Query: 120 RIIKCGFDKDDVIQTSI-------------------------------LCTYGEFGCLDD 148
           RI K     D V+  S+                               +  Y + G +D+
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A  +F +M   +VVSW+ +I+ + D       L+    M REG+  D   +    +AC  
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS---- 264
              L   + +H  V++  ++      ++ I MYS CG L+ A   F + EK    S    
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ-EKLAVNSSVAV 309

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W +M+S +  +   + AL   +++ +     +  TL   L  C     LR G  VH  ++
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369

Query: 325 RKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
             G   E DY+ G  L++ +A  G + +  K+ H +  ++I++++ LI    + G +  A
Sbjct: 370 VSGY--ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLA 427

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDM 442
             L  ++   GL  D F V++ L  C ++ SL  G QIHG  IK   + E V  ++L+DM
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y KCG  +   +LF+ + ++ VV W  +I GF QNG   EA   FH+M    +E ++VTF
Sbjct: 488 YVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547

Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           L  + AC + G LE+ +     + S YG+   +     + D+  + G  Q A  + + M 
Sbjct: 548 LGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607

Query: 562 -ERNVVSWSAMIDCYGMH 578
            E +   W++++   G H
Sbjct: 608 LEPDKTIWTSLLTACGTH 625



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 202/436 (46%), Gaps = 37/436 (8%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK---EPDSFMWAVLIKCYM 71
           +LH  ++ +GL   P A + LI+ Y+  GSL  +  VF   K        +W  ++  ++
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            N   E ++ L  ++ +      ++     L+ C +  +L  G +VH  ++  G++ D +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + + ++  +   G + DA K+F ++ ++D++++S +I     +   S    +F  +++ G
Sbjct: 379 VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG 438

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           ++ D   + ++ + C  L SL   + IHG  +++  + +     + + MY KCG++ +  
Sbjct: 439 LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV 498

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  + +R   SWT +I  + ++G  ++A   F KM+ +  EPN +T + +L +C   G
Sbjct: 499 VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L E +S       + M  EY  L P L  +Y           V+  +G+          
Sbjct: 559 LLEEARST-----LETMKSEYG-LEPYLEHYYC----------VVDLLGQ---------- 592

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
                 G+ +EA EL+ +M    L PD     S L+ACG   +  L   I   ++K    
Sbjct: 593 -----AGLFQEANELINKMP---LEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPD 644

Query: 432 DEFVQSSLIDMYSKCG 447
           D  V +SL + Y+  G
Sbjct: 645 DPSVYTSLSNAYATLG 660



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 11/220 (5%)

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           +A+ L  CG V + + G  I  HVIK    ++ F+ +++I MY      + A+ +F+ + 
Sbjct: 8   IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE-MDEVTFLTAIQACSNIGQLEKGK 519
           ++++V W +M+ G+  +G   +AI L+ +M  +  E  +E  +   ++AC  +G ++ G 
Sbjct: 68  ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
            V+ ++    +R D+ +  ++ DMY K G L  A   F  +   +  SW+ +I  Y   G
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
            +++A +LF +M     +PN V+     W C  SG V++G
Sbjct: 188 LMDEAVTLFHRM----PQPNVVS-----WNCLISGFVDKG 218



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           MD       ++ C  +   ++G+ +   +I  G+ ++++I   +  MY     L  A +V
Sbjct: 3   MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWACSHSGS 615
           FD MSERN+V+W+ M+  Y   G+ N A  L+++MLDS  +  NE  +  +L AC   G 
Sbjct: 63  FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122

Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           ++ G   +  +    +  D+     +VD+  ++G +  A      +  P++ S W  L++
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS-WNTLIS 181

Query: 676 G 676
           G
Sbjct: 182 G 182


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 198/712 (27%), Positives = 361/712 (50%), Gaps = 6/712 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I + A  G L  +  +      P +  W  +I  +  +      + LY  M       +
Sbjct: 275 IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPT 334

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              + S+L A +++     G+++H   +  G D +  + +S++  Y + GC  DA+ VFD
Sbjct: 335 RSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD 394

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
               +++V W++++  +  N    E ++MF  M+R  ++ D  T +S+  AC  L S   
Sbjct: 395 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 454

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + +H   ++  + I   + N+ + MYSK G +  A+  F  I  + + SW A+     +
Sbjct: 455 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 514

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +   ++A+    +M      P+ ++  T + +C+ +     GK +HC  I+ G+   +  
Sbjct: 515 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA- 573

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G +LI+ Y++ G +    K+   +   +I+  N LI+ + +     EA++L  Q+   G
Sbjct: 574 VGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDG 633

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCG-FKNL 451
           L P S + +S LS C    +  +G Q+H + +K  +   D  +  SL  +Y K    ++ 
Sbjct: 634 LKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDA 693

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             LL E    K++  W ++I G+ QNG    ++  F +M    +  DE TF + ++ACS+
Sbjct: 694 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 753

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSA 570
           +     GK +H  +   G        +AL DMY+KCGD+ ++   F  + ++++++ W++
Sbjct: 754 VTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 813

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IF 629
           MI  +  +G  ++A  LF++M +  IKP+EVTF+ +L AC+HSG + EG+ +F +MR ++
Sbjct: 814 MIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVY 873

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
           G+ P L HYAC +DLL R G ++ A + I  +PF  +G +W   L  CR+HK  +  K  
Sbjct: 874 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIA 933

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++L       +  Y LLS+++A  GNW E    R  M   G+ K PG S I
Sbjct: 934 ARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 985



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/579 (29%), Positives = 284/579 (49%), Gaps = 40/579 (6%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           VL ACS +G L  G +VH  ++K GF      + +++  Y + G + +AR+VFD +   D
Sbjct: 174 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 233

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            + WSS+IA Y       E L +F  M + G  PD VT++++                  
Sbjct: 234 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI------------------ 275

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
                            I   +  G L  A     K+    T +W A+IS + +SG    
Sbjct: 276 -----------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 318

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            L  +  M      P   T  ++L + A +    EG+ +H   +  G+     ++G +LI
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANV-FVGSSLI 377

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             YA+CG  S+ + V     E+NI+ WN +++ + +  + +EA+ +   M  + L  D F
Sbjct: 378 NLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 437

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKD--EFVQSSLIDMYSKCGFKNLAYLLFER 458
           +  S L AC  + S  LG Q+H   IK +C D   FV ++ +DMYSK G    A  LF  
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFVANATLDMYSKYGAIGDAKALFSL 496

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           I  K  + WN++  G  QN    EA+ +  +M L+ +  D+V+F TAI ACSNI   E G
Sbjct: 497 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 556

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K +H   I YG+  +  + ++L D+Y+K GD+++++++F  +   ++V  +A+I  +  +
Sbjct: 557 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 616

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQH 637
              ++A  LF+Q+L  G+KP+ VTF +IL  CS S +   GK  +   ++   +  D   
Sbjct: 617 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLL 676

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              +  +  +S  +E A K++  MP   N   W A+++G
Sbjct: 677 GVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 715



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 308/623 (49%), Gaps = 8/623 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA  ++ GL  +    + LI  YA+ G    ++ VFD   E +  MW  ++  ++ N 
Sbjct: 356 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNE 415

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE+I ++  M+R       F + S+L AC+ L     G++VH   IK   D    +  
Sbjct: 416 LPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 475

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  Y ++G + DA+ +F  +  +D +SW+++      N +  E + M   M   G+ P
Sbjct: 476 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 535

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D V+  +   AC  + +    + IH   ++  I  +  +G+S I +YSK GD+ S+ + F
Sbjct: 536 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 595

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +++        A+I+ + ++    +A++ F ++L+   +P+ +T  ++L  C+G     
Sbjct: 596 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 655

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISE 373
            GK VHC  ++ G+  +   LG +L   Y +   + +  K++  + + +N+  W  +IS 
Sbjct: 656 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 715

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD- 432
           YA+ G    +L    +M+   +  D  + AS L AC +V +   G +IHG + K      
Sbjct: 716 YAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 775

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM-WNSMICGFYQNGNSLEAINLFHQMY 491
           E   S+LIDMYSKCG    ++  F+ ++ K  +M WNSMI GF +NG + EA+ LF +M 
Sbjct: 776 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 835

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
              ++ DEVTFL  + AC++ G + +G+     +   YG+   +       D+  + G L
Sbjct: 836 ELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHL 895

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN-EVTFMNILW 608
           Q AQ   D +  R + V W+  +    MH          +++++  ++P    T++ +  
Sbjct: 896 QEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVE--LEPQYSSTYVLLSS 953

Query: 609 ACSHSGSVEEGKFYFNAMRIFGV 631
             + +G+  E K    +MR  GV
Sbjct: 954 LHAATGNWAEAKVTRESMREKGV 976



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 310/665 (46%), Gaps = 39/665 (5%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ +G          L++ YA+ G + ++R VFD    PD+  W+ +I CY    
Sbjct: 189 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 248

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            ++E++ L+ +M                                    K G   D V   
Sbjct: 249 CYQEALALFSRM-----------------------------------DKMGSAPDQVTLV 273

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +I+ T    G LD A  +  KM +   V+W+++I+ +  +      L ++  M   G+ P
Sbjct: 274 TIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWP 333

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              T  S+  A   + +    + +H   +   +  +  +G+S I +Y+KCG    A+  F
Sbjct: 334 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 393

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
               ++    W AM++ + ++   ++A+  F  M+    + +  T +++LG+C  L    
Sbjct: 394 DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFY 453

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK VHC  I+  M     ++  A ++ Y++ G + + + +   I  ++ +SWN L    
Sbjct: 454 LGKQVHCVTIKNCMDISL-FVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGL 512

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
           A+    +EA+ +L +M+  G+ PD  S +++++AC N+ + + G QIH   IK   C + 
Sbjct: 513 AQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH 572

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V SSLID+YSK G    +  +F ++   S+V  N++I GF QN N  EAI LF Q+  +
Sbjct: 573 AVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD 632

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV-RKDIYIDTALTDMYAKCGDLQT 552
            L+   VTF + +  CS       GK VH   +  GV   D  +  +L  +Y K   L+ 
Sbjct: 633 GLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLED 692

Query: 553 AQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           A ++   M + +N+  W+A+I  Y  +G  + +   F +M    ++ +E TF ++L ACS
Sbjct: 693 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACS 752

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
              +  +GK     +   G        + ++D+ S+ GD+  +F+    +    +   W 
Sbjct: 753 DVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWN 812

Query: 672 ALLNG 676
           +++ G
Sbjct: 813 SMIVG 817



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 216/462 (46%), Gaps = 37/462 (8%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R++HG +LR    + G LG+S + +Y K G +  A        +R + + ++++SC+ RS
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145

Query: 276 GWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           G     L +F  +       P+   L  VL +C+ +G L  G+ VHC +++ G      +
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV-F 204

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
              AL++ YA+CG +    +V   I   + + W+ +I+ Y R G  +EAL L  +M   G
Sbjct: 205 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMG 264

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
             PD  ++ + +S   + G L                                  + A  
Sbjct: 265 SAPDQVTLVTIISTLASSGRL----------------------------------DHATA 290

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           L +++   S V WN++I G  Q+G     + L+  M    L     TF + + A +N+  
Sbjct: 291 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 350

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
             +G+ +H   + +G+  ++++ ++L ++YAKCG    A+ VFD   E+N+V W+AM+  
Sbjct: 351 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 410

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +  +    +A  +F+ M+   ++ +E TF++IL AC++  S   GK          ++  
Sbjct: 411 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 470

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           L      +D+ S+ G I  A  +   +P+  + S W AL  G
Sbjct: 471 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS-WNALTVG 511



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 13/285 (4%)

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL-- 495
           SL+++Y K G    A+       +++    +S++    ++G+  + +  F   Y+ C   
Sbjct: 106 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFR--YIRCTAG 163

Query: 496 -EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
              D+      + ACS +G L  G+ VH  ++  G    ++ + AL DMYAKCGD+  A+
Sbjct: 164 GRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNAR 223

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           RVFD ++  + + WS+MI CY   G   +A +LF +M   G  P++VT + I+   + SG
Sbjct: 224 RVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG 283

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---DIEGAFKMIHSMPFPANGSIWG 671
            ++        M      P    +  ++   ++SG   ++ G +K + S       S + 
Sbjct: 284 RLDHATALLKKMPT----PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFA 339

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEG 715
           ++L+     K     + +     + G + N +  + L N+YA+ G
Sbjct: 340 SMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCG 384


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 198/712 (27%), Positives = 360/712 (50%), Gaps = 6/712 (0%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I + A  G L  +  +      P +  W  +I  +  +      + LY  M       +
Sbjct: 265 IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPT 324

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              + S+L A +++     G+++H   +  G D +  + +S++  Y + GC  DA+ VFD
Sbjct: 325 RSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD 384

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
               +++V W++++  +  N    E ++MF  M+R  ++ D  T +S+  AC  L S   
Sbjct: 385 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + +H   ++  + I   + N+ + MYSK G +  A+  F  I  + + SW A+     +
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +   ++A+    +M      P+ ++  T + +C+ +     GK +HC  I+ G+   +  
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH-A 563

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G +LI+ Y++ G +    K+   +   +I+  N LI+ + +     EA++L  Q+   G
Sbjct: 564 VGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDG 623

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCG-FKNL 451
           L P S + +S LS C    +  +G Q+H + +K  +   D  +  SL  +Y K    ++ 
Sbjct: 624 LKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDA 683

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
             LL E    K++  W ++I G+ QNG    ++  F +M    +  DE TF + ++ACS+
Sbjct: 684 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 743

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSA 570
           +     GK +H  +   G        +AL DMY+KCGD+ ++   F  + ++++++ W++
Sbjct: 744 VTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IF 629
           MI  +  +G  ++A  LF++M +  IKP+EVTF+ +L AC+HSG + EG+ +F  MR ++
Sbjct: 804 MIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVY 863

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
           G+ P L HYAC +DLL R G ++ A + I  +PF  +G +W   L  CR+HK  +  K  
Sbjct: 864 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIA 923

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++L       +  Y LLS+++A  GNW E    R  M   G+ K PG S I
Sbjct: 924 ARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/579 (29%), Positives = 284/579 (49%), Gaps = 40/579 (6%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           VL ACS +G L  G +VH  ++K GF      + +++  Y + G + +AR+VFD +   D
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            + WSS+IA Y       E L +F  M + G  PD VT++++                  
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI------------------ 265

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
                            I   +  G L  A     K+    T +W A+IS + +SG    
Sbjct: 266 -----------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            L  +  M      P   T  ++L + A +    EG+ +H   +  G+     ++G +LI
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANV-FVGSSLI 367

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             YA+CG  S+ + V     E+NI+ WN +++ + +  + +EA+ +   M  + L  D F
Sbjct: 368 NLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKD--EFVQSSLIDMYSKCGFKNLAYLLFER 458
           +  S L AC  + S  LG Q+H   IK +C D   FV ++ +DMYSK G    A  LF  
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFVANATLDMYSKYGAIGDAKALFSL 486

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           I  K  + WN++  G  QN    EA+ +  +M L+ +  D+V+F TAI ACSNI   E G
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 546

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K +H   I YG+  +  + ++L D+Y+K GD+++++++F  +   ++V  +A+I  +  +
Sbjct: 547 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 606

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQH 637
              ++A  LF+Q+L  G+KP+ VTF +IL  CS S +   GK  +   ++   +  D   
Sbjct: 607 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLL 666

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
              +  +  +S  +E A K++  MP   N   W A+++G
Sbjct: 667 GVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 308/623 (49%), Gaps = 8/623 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA  ++ GL  +    + LI  YA+ G    ++ VFD   E +  MW  ++  ++ N 
Sbjct: 346 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNE 405

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE+I ++  M+R       F + S+L AC+ L     G++VH   IK   D    +  
Sbjct: 406 LPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 465

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           + L  Y ++G + DA+ +F  +  +D +SW+++      N +  E + M   M   G+ P
Sbjct: 466 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 525

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D V+  +   AC  + +    + IH   ++  I  +  +G+S I +YSK GD+ S+ + F
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +++        A+I+ + ++    +A++ F ++L+   +P+ +T  ++L  C+G     
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISE 373
            GK VHC  ++ G+  +   LG +L   Y +   + +  K++  + + +N+  W  +IS 
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD- 432
           YA+ G    +L    +M+   +  D  + AS L AC +V +   G +IHG + K      
Sbjct: 706 YAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 765

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM-WNSMICGFYQNGNSLEAINLFHQMY 491
           E   S+LIDMYSKCG    ++  F+ ++ K  +M WNSMI GF +NG + EA+ LF +M 
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 825

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
              ++ DEVTFL  + AC++ G + +G+     +   YG+   +       D+  + G L
Sbjct: 826 ELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHL 885

Query: 551 QTAQRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN-EVTFMNILW 608
           Q AQ   D +  R + V W+  +    MH          +++++  ++P    T++ +  
Sbjct: 886 QEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVE--LEPQYSSTYVLLSS 943

Query: 609 ACSHSGSVEEGKFYFNAMRIFGV 631
             + +G+  E K    +MR  GV
Sbjct: 944 LHAATGNWAEAKVTRESMREKGV 966



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 310/665 (46%), Gaps = 39/665 (5%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++ +G          L++ YA+ G + ++R VFD    PD+  W+ +I CY    
Sbjct: 179 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 238

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            ++E++ L+ +M                                    K G   D V   
Sbjct: 239 CYQEALALFSRM-----------------------------------DKMGSAPDQVTLV 263

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +I+ T    G LD A  +  KM +   V+W+++I+ +  +      L ++  M   G+ P
Sbjct: 264 TIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWP 323

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              T  S+  A   + +    + +H   +   +  +  +G+S I +Y+KCG    A+  F
Sbjct: 324 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
               ++    W AM++ + ++   ++A+  F  M+    + +  T +++LG+C  L    
Sbjct: 384 DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFY 443

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK VHC  I+  M     ++  A ++ Y++ G + + + +   I  ++ +SWN L    
Sbjct: 444 LGKQVHCVTIKNCMDISL-FVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGL 502

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDE 433
           A+    +EA+ +L +M+  G+ PD  S +++++AC N+ + + G QIH   IK   C + 
Sbjct: 503 AQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH 562

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V SSLID+YSK G    +  +F ++   S+V  N++I GF QN N  EAI LF Q+  +
Sbjct: 563 AVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD 622

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV-RKDIYIDTALTDMYAKCGDLQT 552
            L+   VTF + +  CS       GK VH   +  GV   D  +  +L  +Y K   L+ 
Sbjct: 623 GLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLED 682

Query: 553 AQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           A ++   M + +N+  W+A+I  Y  +G  + +   F +M    ++ +E TF ++L ACS
Sbjct: 683 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACS 742

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
              +  +GK     +   G        + ++D+ S+ GD+  +F+    +    +   W 
Sbjct: 743 DVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWN 802

Query: 672 ALLNG 676
           +++ G
Sbjct: 803 SMIVG 807



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 216/462 (46%), Gaps = 37/462 (8%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R++HG +LR    + G LG+S + +Y K G +  A        +R + + ++++SC+ RS
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 276 GWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           G     L +F  +       P+   L  VL +C+ +G L  G+ VHC +++ G      +
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV-F 194

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
              AL++ YA+CG +    +V   I   + + W+ +I+ Y R G  +EAL L  +M   G
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMG 254

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
             PD  ++ + +S   + G L                                  + A  
Sbjct: 255 SAPDQVTLVTIISTLASSGRL----------------------------------DHATA 280

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           L +++   S V WN++I G  Q+G     + L+  M    L     TF + + A +N+  
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
             +G+ +H   + +G+  ++++ ++L ++YAKCG    A+ VFD   E+N+V W+AM+  
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +  +    +A  +F+ M+   ++ +E TF++IL AC++  S   GK          ++  
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 460

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           L      +D+ S+ G I  A  +   +P+  + S W AL  G
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS-WNALTVG 501



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 13/285 (4%)

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL-- 495
           SL+++Y K G    A+       +++    +S++    ++G+  + +  F   Y+ C   
Sbjct: 96  SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFR--YIRCTAG 153

Query: 496 -EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
              D+      + ACS +G L  G+ VH  ++  G    ++ + AL DMYAKCGD+  A+
Sbjct: 154 GRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNAR 213

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           RVFD ++  + + WS+MI CY   G   +A +LF +M   G  P++VT + I+   + SG
Sbjct: 214 RVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG 273

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG---DIEGAFKMIHSMPFPANGSIWG 671
            ++        M      P    +  ++   ++SG   ++ G +K + S       S + 
Sbjct: 274 RLDHATALLKKMPT----PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFA 329

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEG 715
           ++L+     K     + +     + G + N +  + L N+YA+ G
Sbjct: 330 SMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCG 374


>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
 gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
          Length = 693

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 182/669 (27%), Positives = 360/669 (53%), Gaps = 5/669 (0%)

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  ++  Y+ +   EE++ ++ +M+      + F + SVLRACS+LG+   G+ +H
Sbjct: 5   DVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDGKCIH 64

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G +IK GF+ + ++ + ++  Y ++G +++A ++F  + + DVVSW+++I+S       S
Sbjct: 65  GCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGKWS 124

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L+++  M++ GV P+  T + +  A G L  L+  + +H H++   ++++  +  + +
Sbjct: 125 QALRIYIDMIKAGVYPNEFTFVKVLAAAGFL-GLKHGKVVHAHLIVFGVELNLVVKTALV 183

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKC  +  A R      +     WTA++S   ++   ++A+ +F +M       N  
Sbjct: 184 HMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGILSNNF 243

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG-KMSECEKVIH 357
           T +++L +C+ +  L  G+ +H ++I  G+  +   +G AL++ Y +C  ++ +  +V  
Sbjct: 244 TYLSILNACSLILSLDLGRQIHARVIMAGLEDDIP-VGNALVDMYMKCSHEVEDGLRVFE 302

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            I   +++SW  LI+  +  G  + + +  ++M   GL P+S +++  L +C    S   
Sbjct: 303 GIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQ 362

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            L++HGHVIK +   D  V ++L+D Y+     + A+ L   + Q+  + +  +     Q
Sbjct: 363 LLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQ 422

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            G+   A+++ + M+ + ++MD  +    + A + +  +E G  +H   +  G+   I +
Sbjct: 423 MGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISV 482

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              L   Y KCG  + A+R F  + E ++VSW+ +I     +G ++ A S F  M  +G+
Sbjct: 483 SNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGV 542

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           KP+ VTF+ +L+ C+H G V+ G  YFN+M+ + G+EP L HY C+ DLL R+G +E A 
Sbjct: 543 KPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYVCLFDLLGRAGRLEEAM 602

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           +++ +MP   N SI+  LL  C++H+ + + + I         +D  +  +L+N+Y   G
Sbjct: 603 EILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDPAFNLMLANLYDSSG 662

Query: 716 NWDEFGKVR 724
             D    +R
Sbjct: 663 RPDLAATIR 671



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 273/568 (48%), Gaps = 10/568 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C+ L + +    +H  ++  G   +    + LI+ Y++ GS+  +  +F   +  D
Sbjct: 47  VLRACSALGEFSDGKCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGD 106

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I   +    + +++ +Y  MI+     + F +  VL A   LG L  G+ VH 
Sbjct: 107 VVSWTTMISSLVQAGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLG-LKHGKVVHA 165

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I  G + + V++T+++  Y +   +DDA ++       D   W++I++    N  + E
Sbjct: 166 HLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLRE 225

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  M   G+  +  T LS+  AC  + SL   R IH  V+   ++ D P+GN+ + 
Sbjct: 226 AVVAFQEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVD 285

Query: 240 MYSKCG-DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
           MY KC  ++    R F  IE     SWT++I+  +  G+ Q + +S+++M     +PN +
Sbjct: 286 MYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSV 345

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIH 357
           TL  +L SC       +   +H  +I+     ++D  +  AL++ YA   ++ +   +I 
Sbjct: 346 TLSIILRSCRAAKSASQLLKLHGHVIKT--NADHDIAVSNALVDAYAGNERVDDAWHLIR 403

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +R+ L++  L +   + G  + AL ++  M    +  D +S+A  LSA   + S++ 
Sbjct: 404 NMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVET 463

Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G+Q+H + +K        V + L+  Y KCG    A   F  I++  +V WN +I     
Sbjct: 464 GMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLAS 523

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIY 535
            G+   A++ F  M L  ++ D VTFL  +  C++ G ++ G ++ +     +G+   + 
Sbjct: 524 YGHISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLD 583

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSER 563
               L D+  + G L+ A  + ++M  R
Sbjct: 584 HYVCLFDLLGRAGRLEEAMEILETMPIR 611



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 229/466 (49%), Gaps = 4/466 (0%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M SRDVVSW+ I+++Y  +    E L MF  M+  G  P+  T  S+  AC  L      
Sbjct: 1   MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           + IHG V++   + +  LG+  I +YSK G +  A R F  +E     SWT MIS   ++
Sbjct: 61  KCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQA 120

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G + +AL  ++ M++    PN  T + VL +   LG L+ GK VH  +I  G+      +
Sbjct: 121 GKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLG-LKHGKVVHAHLIVFGVELNL-VV 178

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL+  Y++C +M +  ++     E +   W  ++S  A+    +EA+    +M+  G+
Sbjct: 179 KTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGI 238

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYL 454
           + ++F+  S L+AC  + SL LG QIH  VI    +D+  V ++L+DMY KC  +    L
Sbjct: 239 LSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGL 298

Query: 455 -LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +FE I+   V+ W S+I G  ++G    + + + +M  + L+ + VT    +++C    
Sbjct: 299 RVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAK 358

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
              +   +H  +I      DI +  AL D YA    +  A  +  +MS+R+ ++++ +  
Sbjct: 359 SASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLAT 418

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
                G    A  +   M +  IK +  +    L A +   SVE G
Sbjct: 419 RLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETG 464



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 182/449 (40%), Gaps = 35/449 (7%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMG-SLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           ++HA +++ GL  D P    L++ Y +    +     VF+  + PD   W  LI     +
Sbjct: 263 QIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEH 322

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            F + S   Y +M       ++     +LR+C +        K+HG +IK   D D  + 
Sbjct: 323 GFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVS 382

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  Y     +DDA  +   M+ RD ++++ +             L + + M  + ++
Sbjct: 383 NALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDIK 442

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D  +M     A   L S+     +H + ++  +     + N  +  Y KCG    AER 
Sbjct: 443 MDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERA 502

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +I +    SW  +IS     G    AL +F  M     +P+ +T + VL +C      
Sbjct: 503 FAEIREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLLVLFTC------ 556

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
                 HC ++  G+            E++    +M       H I E  +  +  L   
Sbjct: 557 -----THCGLVDMGL------------EYFNSMKEM-------HGI-EPQLDHYVCLFDL 591

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
             R G  +EA+E+L   +T  + P++    + L+AC     + LG  I    +K+D  D 
Sbjct: 592 LGRAGRLEEAMEIL---ETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDP 648

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
                L ++Y   G  +LA  +   ++ K
Sbjct: 649 AFNLMLANLYDSSGRPDLAATIRRSVRDK 677


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 217/783 (27%), Positives = 396/783 (50%), Gaps = 68/783 (8%)

Query: 3   LFRSCTNLRKLTRL-----HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           LF+  T +++L RL        +    +  D  +   +I  Y++ G +  +RL+FD F  
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVG 230

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W +L+  Y      EE+  ++  M  E+  +S   + +++      GDL +  K+
Sbjct: 231 KNIRTWTILLTGYAKEGRIEEAREVFESMT-ERNVVS---WNAMISGYVQNGDLKNARKL 286

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
              +     +K+     S++  Y     + +AR++FD+M  R+ VSW  +I+ Y   +D 
Sbjct: 287 FDEMP----EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDY 342

Query: 178 SEGLKMFHSMVREGVEPD---FVTMLSLAEACGEL---CSLRPARSIHGHVLRRKIKIDG 231
            E   +F  M R    PD   FV +LS      +L    SLRP        ++   + D 
Sbjct: 343 WEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPI------AIKTGYEGDV 396

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            +G++ +  Y++ G L  A   F  + +R   SWT MI+ + + G     L+  +++ E 
Sbjct: 397 VVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCG----RLDDAIQLYER 452

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             E  + T   ++ + A +G +++ + +  +I+   +         A+I  Y + G + E
Sbjct: 453 VPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNV-----VAWNAIIAGYTQNGMLKE 507

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            + +   +  +N  SW  +I+ + +   S+EALELL+++   G +P   S  S+LSAC N
Sbjct: 508 AKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACAN 567

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG--------FKNL----------- 451
           +G +++G  IH   IK  C+ + +V + LI MY+KCG        F+ +           
Sbjct: 568 IGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSL 627

Query: 452 ------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
                       A ++FE++ ++ VV W ++I  + Q G+   A++LF  M    ++ ++
Sbjct: 628 ISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQ 687

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           +T  + + AC N+G ++ G+  H  +   G    +++  +L  MY KCG  +    VF+ 
Sbjct: 688 LTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEE 746

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
           M E ++++W+A++     +G   +A  +F+QM   GI P++++F+ +L ACSH+G V+EG
Sbjct: 747 MPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEG 806

Query: 620 KFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
             +FN+M + +G+ P + HY CMVDLL R+G +  A  +I +MP   +  IW ALL  CR
Sbjct: 807 WAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACR 866

Query: 679 IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
           IH+ +++ + + + L       +  Y LLSN++A +G WD+  ++R +M+  GL K PG 
Sbjct: 867 IHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGI 926

Query: 739 STI 741
           S I
Sbjct: 927 SWI 929



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 151/376 (40%), Gaps = 37/376 (9%)

Query: 18  AHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFE 77
           +H+  T    D  +   LI   +E   L  +R+VF+   + D   W  +I  Y+     E
Sbjct: 610 SHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGE 669

Query: 78  ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
            ++ L+  M+      +     S+L AC +LG +  GE+ H  I K GFD    +  S++
Sbjct: 670 VALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLI 729

Query: 138 CTYGEFGC-LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
             Y  F C  +D   VF++M   D+++W++++     N    E +K+F  M  EG+ PD 
Sbjct: 730 TMY--FKCGYEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQ 787

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS---KCGDLLSAERT 253
           ++ L +  AC     L      H + + +K  I  PL   +  M     + G L  AE  
Sbjct: 788 MSFLGVLCACSH-AGLVDEGWAHFNSMTQKYGI-MPLVYHYTCMVDLLGRAGYLSEAEAL 845

Query: 254 FVKIE-KRCTTSWTAMISC---YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA- 308
              +  K  +  W A++     +      Q+  E   +M + K     + L  +  S   
Sbjct: 846 IENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKS-ATYVLLSNLFASQGM 904

Query: 309 --------------------GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA---E 345
                               G+ W++    +HC +       + + +  AL E+Y     
Sbjct: 905 WDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRA 964

Query: 346 CGKMSECEKVIHAIGE 361
            G M +   V+H + E
Sbjct: 965 TGYMPDTNFVLHDVEE 980


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 210/633 (33%), Positives = 326/633 (51%), Gaps = 57/633 (9%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+ +I          +   ++  M   G  PD  T   + +AC  L SL    S+H  V 
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT---TSWTAMISCYNRSGWFQK 280
           R     +  + N+ + MY KCG L  A   F  +  R      SW +++S Y  +     
Sbjct: 287 RSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANT 346

Query: 281 ALESFVKMLEVK-EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           AL  F KM       P++I+L+ +L +CA L     G+ VH   IR G+  +  ++G A+
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV-FVGNAV 405

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNML----------------------------- 370
           ++ YA+CGKM E  KV   +  ++++SWN +                             
Sbjct: 406 VDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDV 465

Query: 371 ------ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
                 I+ YA++G   EAL++  QM   G  P+  ++ S LSAC +VG+L  G + H +
Sbjct: 466 VTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCY 525

Query: 425 VIKI---------DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS--VVMWNSMICG 473
            IK             D  V + LIDMY+KC    +A  +F+ +  K   VV W  MI G
Sbjct: 526 AIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGG 585

Query: 474 FYQNGNSLEAINLFHQMYL--NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YG 529
           + Q+G++  A+ LF  M+     ++ ++ T   A+ AC+ +  L  G+ VH  ++   YG
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG 645

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
               +++   L DMY+K GD+ TAQ VFD+M +RN VSW++++  YGMHG+  DA  +F 
Sbjct: 646 SVM-LFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFD 704

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
           +M    + P+ +TF+ +L+ACSHSG V+ G  +FN M + FGV+P  +HYACMVDL  R+
Sbjct: 705 EMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRA 764

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G +  A K+I+ MP      +W ALL+ CR+H  +++ +     L    + ++G YTLLS
Sbjct: 765 GRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLS 824

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           NIYA    W +  ++R  M+ TG+KK PG S I
Sbjct: 825 NIYANARRWKDVARIRYTMKRTGIKKRPGCSWI 857



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 179/677 (26%), Positives = 322/677 (47%), Gaps = 89/677 (13%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--F 61
            + C +L     LH   ++ GL +    +T LI +Y    S   + L+ +      S  F
Sbjct: 168 LKECNSLAHAKLLHQQSIMQGLLFH--LATNLIGTYIASNSTAYAILLLERLPPSPSSVF 225

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  LI+  +      +   LY +M     T  ++ +P V +AC++L  L  G  +H  +
Sbjct: 226 WWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATV 285

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR---DVVSWSSIIASYFDNADVS 178
            + GF  +  +  +++  YG+ G L  A  +FD +  R   D+VSW+S++++Y   +D +
Sbjct: 286 SRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDAN 345

Query: 179 EGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
             L +FH M  R  + PD ++++++  AC  L +    R +HG  +R  +  D  +GN+ 
Sbjct: 346 TALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAV 405

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE--- 294
           + MY+KCG +  A + F +++ +   SW AM++ Y+++G  + AL  F +M E   E   
Sbjct: 406 VDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDV 465

Query: 295 --------------------------------PNLITLITVLGSCAGLGWLREGKSVHCQ 322
                                           PN++TL+++L +C  +G L  GK  HC 
Sbjct: 466 VTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCY 525

Query: 323 IIR-----KGMGPEYDYLG--PALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISE 373
            I+      G  P  D L     LI+ YA+C       K+  ++   +R++++W ++I  
Sbjct: 526 AIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGG 585

Query: 374 YARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--ID 429
           YA+ G +  AL+L   M      + P+ F+++ +L AC  + +L+ G Q+H +V++    
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG 645

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
               FV + LIDMYSK G  + A ++F+ + Q++ V W S++ G+  +G   +A+ +F +
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDE 705

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M    L  D +TFL  + ACS+ G ++ G    +++      KD  +D    + YA    
Sbjct: 706 MRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRM-----SKDFGVDPG-PEHYA---- 755

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
                                M+D +G  G+L +A  L  +M    ++P  V ++ +L A
Sbjct: 756 --------------------CMVDLWGRAGRLGEAMKLINEM---PMEPTPVVWVALLSA 792

Query: 610 CSHSGSVEEGKFYFNAM 626
           C    +VE G+F  N +
Sbjct: 793 CRLHSNVELGEFAANRL 809



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 242/535 (45%), Gaps = 61/535 (11%)

Query: 3   LFRSCTNLRKLTRL---HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-- 57
           +F++C NL  L+     HA +  +G   +      ++  Y + G+LR +  +FD      
Sbjct: 265 VFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRG 324

Query: 58  -PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGE 115
             D   W  ++  YMW +    ++ L+HKM        + I   ++L AC+SL     G 
Sbjct: 325 IQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGR 384

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +VHG  I+ G   D  +  +++  Y + G +++A KVF +M  +DVVSW++++  Y    
Sbjct: 385 QVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAG 444

Query: 176 DVSEGLKMFHSMVREGVE-----------------------------------PDFVTML 200
            +   L +F  M  E +E                                   P+ VT++
Sbjct: 445 RLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLV 504

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGP--------LGNSFIVMYSKCGDLLSAER 252
           SL  AC  + +L   +  H + ++  + +DGP        + N  I MY+KC     A +
Sbjct: 505 SLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARK 564

Query: 253 TF--VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVLGSCA 308
            F  V  + R   +WT MI  Y + G    AL+ F  M ++ +  +PN  TL   L +CA
Sbjct: 565 MFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACA 624

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L  LR G+ VH  ++R   G    ++   LI+ Y++ G +   + V   + +RN +SW 
Sbjct: 625 RLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWT 684

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK- 427
            L++ Y   G  ++AL +  +M+   L+PD  +    L AC + G +  G+     + K 
Sbjct: 685 SLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKD 744

Query: 428 --IDCKDEFVQSSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMI--CGFYQN 477
             +D   E   + ++D++ + G    A  L+ E   + + V+W +++  C  + N
Sbjct: 745 FGVDPGPEHY-ACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSN 798



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 212/479 (44%), Gaps = 68/479 (14%)

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++  R   S + ++ C+       ++  +  ++L     P     IT L  C  L     
Sbjct: 125 QLHHRYRCSISMLLRCFPIKSKLLQSQFTNTRLLSCATIP-----ITALKECNSLA---H 176

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISE 373
            K +H Q I +G+     +L   LI  Y      +    ++  +     ++  WN LI  
Sbjct: 177 AKLLHQQSIMQGL---LFHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRR 233

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKD 432
               G  ++   L  QM++ G  PD ++      AC N+ SL LG  +H  V +     +
Sbjct: 234 ALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASN 293

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV---VMWNSMICGFYQNGNSLEAINLFHQ 489
            FV ++++ MY KCG    A+ +F+ +  + +   V WNS++  +    ++  A+ LFH+
Sbjct: 294 VFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHK 353

Query: 490 MYL-NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           M   + +  D ++ +  + AC+++    +G+ VH   I  G+  D+++  A+ DMYAKCG
Sbjct: 354 MTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCG 413

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL--------------------- 587
            ++ A +VF  M  ++VVSW+AM+  Y   G+L  A SL                     
Sbjct: 414 KMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVIT 473

Query: 588 --------------FKQMLDSGIKPNEVTFMNILWACSHSGSVEEG--------KFYFNA 625
                         F+QM D G +PN VT +++L AC   G++  G        KF  N 
Sbjct: 474 GYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILN- 532

Query: 626 MRIFGVEP---DLQHYACMVDLLSRSGDIEGAFKMIHSM-PFPANGSIWGALLNGCRIH 680
             + G +P   DL+    ++D+ ++    E A KM  S+ P   +   W  ++ G   H
Sbjct: 533 --LDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQH 589


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 188/580 (32%), Positives = 320/580 (55%), Gaps = 13/580 (2%)

Query: 168 IASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           I  Y  +  + E + + +S+   R   +P F    SL + C +  S       H H ++ 
Sbjct: 32  IIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYA--SLLQTCTKAVSFTHGIQFHSHAIKS 89

Query: 226 KIKIDGPLGNSFIVMYSKCG-DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
            +  D  +GNS + +Y K G +L  A R F  +  +   SWT+MI+ Y +    +K+LE 
Sbjct: 90  GLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLEL 149

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F++ML +  EPN  TL  V+ +C+GLG LR GK  H  ++ +G     D +  ALI+ Y 
Sbjct: 150 FLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLN-DVISTALIDMYG 208

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVA 403
               + +   V   + + + + W  +IS + R  +  +AL     M +  GL PD F+  
Sbjct: 209 RNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFG 268

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           + L+ACGN+G L+ G ++H  VI      + FV+SSL+DMY KC   N +  +F+R+  K
Sbjct: 269 TVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVK 328

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           ++V W +++ G+ QNG+    I +F +      ++D  +F T ++AC+ +  + +GK VH
Sbjct: 329 NLVSWTALLGGYCQNGDFESVIRIFREGK----KVDTYSFGTVLRACAGLAAVRQGKEVH 384

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
            + +     +D+  ++AL D+YAKCG +  A R+F  MS RN+++W++MI  +  +G+  
Sbjct: 385 CQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGG 444

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
           +   LF +M++ GI+P+ ++F+ +L+ACSH+G V++GK YF AM  ++ ++P ++HY CM
Sbjct: 445 EVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCM 504

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           +DLL R+G +E A  +I +       S+W  LL  C         + I K+      + +
Sbjct: 505 IDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHH 564

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             Y  L+N+Y   G WD+  K+R++M   G+ K+PG S I
Sbjct: 565 LSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWI 604



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 286/558 (51%), Gaps = 14/558 (2%)

Query: 48  SRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS 107
           + L   T + P S  + ++  C   + F  E+I + + +   + +   F Y S+L+ C+ 
Sbjct: 15  ASLNLKTLENPQSKAYKIIQYCKSGSLF--EAIHVLNSIDWTRLSNKPFFYASLLQTCTK 72

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC-LDDARKVFDKMTSRDVVSWSS 166
                 G + H   IK G D D  +  S+L  Y + G  L +AR+VFD +  +D++SW+S
Sbjct: 73  AVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTS 132

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           +I  Y       + L++F  M+  G+EP+  T+ ++ +AC  L  LR  +  HG V+ R 
Sbjct: 133 MITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRG 192

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
             ++  +  + I MY +   +  A   FV++ +     WT++IS + R+  + KAL  F 
Sbjct: 193 FDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFY 252

Query: 287 KMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            M       P+  T  TVL +C  LG L++GK VH ++I  G+     ++  +L++ Y +
Sbjct: 253 SMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNV-FVESSLVDMYGK 311

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           C  +++ + V   +  +N++SW  L+  Y + G      E ++++   G   D++S  + 
Sbjct: 312 CRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNG----DFESVIRIFREGKKVDTYSFGTV 367

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           L AC  + +++ G ++H   +K  C +D   +S+L+D+Y+KCG  + AY +F R+  +++
Sbjct: 368 LRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNL 427

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           + WNSMI GF QNG   E   LF +M    +  D ++F+  + ACS+ G +++GK     
Sbjct: 428 ITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAA 487

Query: 525 LIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLN 582
           +   Y ++  I     + D+  + G L+ A+ + ++ + R+  S W+ ++          
Sbjct: 488 MTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSA 547

Query: 583 DAASLFKQMLDSGIKPNE 600
            A  + K+ ++  +KP+ 
Sbjct: 548 TAERIAKKAVE--LKPDH 563



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 221/421 (52%), Gaps = 10/421 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMG-SLRSSRLVFDTFKEP 58
           L ++CT     T   + H+H + +GL  D      L+  Y ++G +L  +R VFD     
Sbjct: 66  LLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYK 125

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  +I  Y+     ++S+ L+ +M+      + F   +V++ACS LGDL  G+  H
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFH 185

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++  GFD +DVI T+++  YG    +DDA  VF ++   D + W+SII+++  N    
Sbjct: 186 GVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYD 245

Query: 179 EGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           + L  F+SM R+ G+ PD  T  ++  ACG L  L+  + +H  V+   +  +  + +S 
Sbjct: 246 KALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSL 305

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KC  +  ++  F ++  +   SWTA++  Y ++G F    ES +++    ++ + 
Sbjct: 306 VDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDF----ESVIRIFREGKKVDT 361

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            +  TVL +CAGL  +R+GK VHCQ +++    +      AL++ YA+CG +    ++  
Sbjct: 362 YSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDV-VTESALVDLYAKCGCIDFAYRIFV 420

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  RN+++WN +I  +A+ G   E  +L  +M   G+ PD  S    L AC + G +  
Sbjct: 421 RMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQ 480

Query: 418 G 418
           G
Sbjct: 481 G 481


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 190/616 (30%), Positives = 336/616 (54%), Gaps = 7/616 (1%)

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +D   T  L  + + G ++DA ++FD+M   D   W+ +I  +       E L+++  MV
Sbjct: 59  NDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMV 118

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             GV+ D  T   + ++   + SL   + IH  V++ +   D  + NS I +Y K G   
Sbjct: 119 FSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSW 178

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            AE+ F ++ +R   SW +MIS Y       ++L  F +ML+   +P+  + ++ LG+C+
Sbjct: 179 DAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACS 238

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +     GK +HC  +R  +      +  ++++ Y++ G++S  E++   I +RNI++WN
Sbjct: 239 HVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWN 298

Query: 369 MLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           +LI  YAR     +A     +M +  GL PD  ++ + L AC    ++  G  IHG+ ++
Sbjct: 299 VLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRTIHGYAMR 354

Query: 428 IDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                  V  ++LIDMY + G    A ++F+RI +K+++ WNS+I  + QNG +  A+ L
Sbjct: 355 RGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALEL 414

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F +++ + L  D  T  + + A +    L +G+ +H  ++      +  I  +L  MYA 
Sbjct: 415 FQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAM 474

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CGDL+ A++ F+ +  ++VVSW+++I  Y +HG    +  LF +M+ S + PN+ TF ++
Sbjct: 475 CGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASL 534

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACS SG V+EG  YF +M R +G++P ++HY  M+DL+ R+G+   A + I  MPF  
Sbjct: 535 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLP 594

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
              IWG+LLN  R H  I V +   +++     ++ G Y LL N+YAE   W++  +++ 
Sbjct: 595 TARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKL 654

Query: 726 IMEVTGLKKVPGYSTI 741
           +ME  G+ +    ST+
Sbjct: 655 LMESKGISRTSSRSTV 670



 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 176/571 (30%), Positives = 301/571 (52%), Gaps = 12/571 (2%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           + PA TR +  +A+ G +  +  +FD   + D+F+W V+IK +     + E++ LY +M+
Sbjct: 59  NDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMV 118

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
                  +F YP V+++ + +  L  G+K+H  +IK  F  D  +  S++  Y + GC  
Sbjct: 119 FSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSW 178

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DA KVF++M  RD+VSW+S+I+ Y    D    L +F  M++ G +PD  + +S   AC 
Sbjct: 179 DAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACS 238

Query: 208 ELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
            + S    + +H H +R +I+  D  +  S + MYSK G++  AER F  I +R   +W 
Sbjct: 239 HVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWN 298

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            +I CY R+     A   F KM E    +P++ITLI +L +CA L    EG+++H   +R
Sbjct: 299 VLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMR 354

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
           +G  P +  L  ALI+ Y E G++   E +   I E+N++SWN +I+ Y + G +  ALE
Sbjct: 355 RGFLP-HIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALE 413

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYS 444
           L  ++    L+PDS ++AS L A     SL  G QIH +++K     +  + +SL+ MY+
Sbjct: 414 LFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYA 473

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
            CG    A   F  +  K VV WNS+I  +  +G    ++ LF +M  + ++ ++ TF +
Sbjct: 474 MCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFAS 533

Query: 505 AIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
            + ACS  G +++G W + + +   YG+   I     + D+  + G+  +A+R    M  
Sbjct: 534 LLAACSISGMVDEG-WEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPF 592

Query: 563 RNVVS-WSAMIDCYGMHGQLNDAASLFKQML 592
                 W ++++    H  +  A    +Q+ 
Sbjct: 593 LPTARIWGSLLNASRNHNDITVAEFAAEQIF 623



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 7/413 (1%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++L +  ++HA ++      D      LI  Y ++G    +  VF+   E D   W  +I
Sbjct: 140 SSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMI 199

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y+       S++L+ +M++       F   S L ACS +     G+++H   ++   +
Sbjct: 200 SGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIE 259

Query: 128 KDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             DV + TSIL  Y ++G +  A ++F  +  R++V+W+ +I  Y  N+ V++    F  
Sbjct: 260 TGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQK 319

Query: 187 MVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           M  + G++PD +T+++L  AC  L      R+IHG+ +RR       L  + I MY + G
Sbjct: 320 MSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLPHIVLDTALIDMYGEWG 375

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L SAE  F +I ++   SW ++I+ Y ++G    ALE F K+ +    P+  T+ ++L 
Sbjct: 376 QLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILP 435

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           + A    L EG+ +H  I++   G     L  +L+  YA CG + +  K  + +  ++++
Sbjct: 436 AYAESLSLSEGRQIHAYIVKSRYGSNTIILN-SLVHMYAMCGDLEDARKCFNHVLLKDVV 494

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           SWN +I  YA  G  + ++ L  +M    + P+  + AS L+AC   G +  G
Sbjct: 495 SWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEG 547



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 1/204 (0%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  +C  L   T +H + +  G        T LI+ Y E G L+S+ ++FD   E +   
Sbjct: 336 LLPACAILEGRT-IHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLIS 394

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I  Y+ N     ++ L+ K+        +    S+L A +    L  G ++H  I+
Sbjct: 395 WNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIV 454

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K  +  + +I  S++  Y   G L+DARK F+ +  +DVVSW+SII +Y  +      + 
Sbjct: 455 KSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVC 514

Query: 183 MFHSMVREGVEPDFVTMLSLAEAC 206
           +F  M+   V+P+  T  SL  AC
Sbjct: 515 LFSEMIASKVDPNKSTFASLLAAC 538


>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
 gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
          Length = 785

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 198/705 (28%), Positives = 350/705 (49%), Gaps = 17/705 (2%)

Query: 19  HLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEE 78
            +L+ G+  D       +  Y   GS+  ++ VFD     +   W  +I  +   +   E
Sbjct: 86  QMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTSL--E 143

Query: 79  SILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL 137
                 +++  +   SNF+ Y ++++ACS    L  G  +H R ++     +  +  +++
Sbjct: 144 QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALI 203

Query: 138 CTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
             YG  G L+DAR +F  M  RD+++W+++I  Y  +  V E + ++  M++EG +PD V
Sbjct: 204 TMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKV 263

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T ++L        +L   + +H H++   + I+  LG + + MYSKC  L      F K+
Sbjct: 264 TFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKM 323

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +R   SW  M++ Y + G  +KA++    M     +P+ +T + +L  C G   L+ G+
Sbjct: 324 PQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGR 383

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            VH   I +G       L  +L+  Y  CG++ + E V   I +RN++SW  +++ Y+R+
Sbjct: 384 KVH-GWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQ 442

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQ 436
                AL L   +   G+ P   +   +L AC    +L  G  +H   ++     D  + 
Sbjct: 443 NRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLG 502

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
           S+L+ MY +CG    A   F+  + +K+ V W++MI  F Q+G   E +     M    L
Sbjct: 503 SALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGL 562

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY------IDTALTDMYAKCGD 549
           +M   TF + + ACSN+  L +GK +H    SY VR+  +      +  +L  MY KCG 
Sbjct: 563 DMSPATFASTLSACSNLADLREGKRIH----SY-VRERRFDTEAATVTNSLVTMYGKCGS 617

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A+ VF++   ++ + W+A+I  Y  H Q  DA  LF +M   G+ P+ VTF+ IL  
Sbjct: 618 LDCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSV 677

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           CSH G ++EG + + +M   G+EP   +YAC++DLL R+G ++ A + I S+        
Sbjct: 678 CSHGGLLDEGVYAYASMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIET 737

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
             +LL+ C+ H  +   +   + +       +  + +LS+IY+ +
Sbjct: 738 LTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSAD 782



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 284/571 (49%), Gaps = 5/571 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   + +    + P    LI  Y   G L  +R +F +  E D   W  LI  Y  +  
Sbjct: 183 LHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGH 242

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE++LLY  M++E        + ++L   +    L   + VH  I++ G   +  + T+
Sbjct: 243 VEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTA 302

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y +   L+D R +F+KM  R+V+SW+ ++ +Y  +    + +++   M  +GV+PD
Sbjct: 303 LVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPD 362

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT + L   C     L+  R +HG +   + + D  L NS + MY +CG++  AE  F 
Sbjct: 363 NVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFD 422

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I +R   SWTAM++ Y+R      AL  F  +     +P  IT +  L +C G   L +
Sbjct: 423 GILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDK 482

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLISEY 374
           G+ VH   ++ G   +   LG AL+  Y  CG + + +        R N ++W+ +I+ +
Sbjct: 483 GRLVHSCAVQSGNDIDVS-LGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAF 541

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV--IKIDCKD 432
            + G  +E L+ L  MQ  GL     + AS+LSAC N+  L+ G +IH +V   + D + 
Sbjct: 542 VQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEA 601

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V +SL+ MY KCG  + A  +FE  +++  + WN++I G+ Q+  + +A+ LFH+M  
Sbjct: 602 ATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQ 661

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +  D VTF+  +  CS+ G L++G + +  ++  G+         + D+  + G LQ 
Sbjct: 662 EGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGLEPTQDNYACVIDLLGRAGKLQE 721

Query: 553 AQRVFDSMSERNVV-SWSAMIDCYGMHGQLN 582
           A+    S+  R  + + ++++     HG + 
Sbjct: 722 AEEFIQSLGTRPAIETLTSLLSSCKSHGDVQ 752



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 219/442 (49%), Gaps = 6/442 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L ++  +H+H++ +G+  +    T L+  Y++  SL  +R +F+   + +   W V++  
Sbjct: 278 LTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTA 337

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y  +    +++ +   M  +     N     +L  C+   DL  G KVHG I +   + D
Sbjct: 338 YAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEAD 397

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
            ++  S+L  YG  G ++ A  VFD +  R+V+SW++++ +Y         L +FH++  
Sbjct: 398 LILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHL 457

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
            GV+P  +T L   +AC    +L   R +H   ++    ID  LG++ + MY +CG +  
Sbjct: 458 SGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRD 517

Query: 250 AERTFVKIEKRCT-TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           A+  F   E R    +W+AMI+ + + G  ++ L+    M +   + +  T  + L +C+
Sbjct: 518 AKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACS 577

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L  LREGK +H  +  +    E   +  +L+  Y +CG +    +V      ++ + WN
Sbjct: 578 NLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWN 637

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +IS YA+   +++A+EL  +MQ  G+ PD  +    LS C + G L  G+  +  ++++
Sbjct: 638 AIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVEL 697

Query: 429 ---DCKDEFVQSSLIDMYSKCG 447
                +D +  + +ID+  + G
Sbjct: 698 GLEPTQDNY--ACVIDLLGRAG 717



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 13/193 (6%)

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           +QAC  +  L+  + +H +++   +   +++   L   Y KC  L  A   F+ MS +NV
Sbjct: 2   LQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV 61

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            +W+A+I     H   + A  L +QML  G+KP+ +T +  L      GSV++ K  F+A
Sbjct: 62  YTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFDA 121

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP---FPANGSIWGALLNGCRIHKR 682
           M    V      +  M+   + +  +E AFK+   M    F +N   +  L+  C   + 
Sbjct: 122 MPARNVIT----WTAMIGAHAVT-SLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEF 176

Query: 683 IDV-----MKTIE 690
           ++V     M+++E
Sbjct: 177 LEVGIILHMRSVE 189


>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
 gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
          Length = 845

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 203/685 (29%), Positives = 341/685 (49%), Gaps = 19/685 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + +  +C +L +   +H  ++   L  D      L++  A+   L  +   F      D 
Sbjct: 133 ISILNACESLAQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDV 192

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++  Y  N    E+   Y +M+ E    +N  + +VL ACSS  D    + V+G 
Sbjct: 193 ISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARD---ADLVYGN 249

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++  ++ D ++  + +  + + GCLD A  VF +M   DV SW++++A+   +   SE 
Sbjct: 250 VVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEA 309

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++F  M  E V  D  T++     C    SL   +SIH  V R  ++ D   G + + M
Sbjct: 310 LELFRRMPSE-VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTM 368

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKMLEVKEEPNLIT 299
           YS+CGDL  A R F  I  +   SW  MI+ Y R      +ALE F  ML     P   T
Sbjct: 369 YSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTT 428

Query: 300 LITVLGS--CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            + V+ +  C  +G     K +H  I+  G+  +  ++G AL+  Y   G + +  +V  
Sbjct: 429 ALNVVSAVECQSVG-----KQLHGWIVDTGLYSD-SFIGSALVNMYERTGSLGDARRVFE 482

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            I ER++ +WN ++      G  +EALE   +M   G   +  +   +LSA  +   +  
Sbjct: 483 KIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAV-SPDRVSY 541

Query: 418 GLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G ++HG + +   + D  V ++LI MY++C     A   F+R++ KS+V W S+I     
Sbjct: 542 GRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVD 601

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
            G+  EAI+LF +M L   E D VTF T ++AC+ +    +GK VH +    G+  ++++
Sbjct: 602 LGSCQEAIDLFQRMEL---EPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFV 658

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            TAL  M++K G+L  A+R+F+++    +  W+AM+  Y   G        F  M   G+
Sbjct: 659 ATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGV 718

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAF 655
            P+ +TF+ ++ ACSH+G VE+G   F +M   +GV   L+ Y C++DLL+R+G +E A+
Sbjct: 719 APDHITFLAVVSACSHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAY 778

Query: 656 KMIHSMPFPANGSIWGALLNGCRIH 680
             +  MP   +   W  LL  C+I 
Sbjct: 779 DFLQGMPCGPSDVTWKTLLAACKIQ 803



 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 189/673 (28%), Positives = 344/673 (51%), Gaps = 26/673 (3%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L + T +++ +   G+  D      ++  + +  S+  +  VF+   +    +W  ++  
Sbjct: 44  LHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTA 103

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           ++ +   + + L + +M  E        + S+L AC S   L  GE VH  I+    + D
Sbjct: 104 FVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACES---LAQGELVHRLIVDKNLESD 160

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
            VI  +++    +   LD A + F +M  RDV+SW+ ++ +Y  N  ++E    +  M+ 
Sbjct: 161 VVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLL 220

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           EGV P+ +T L++  AC    S R A  ++G+V+  + + D  + N+ I M+SKCG L  
Sbjct: 221 EGVVPNNITFLAVLAACS---SARDADLVYGNVVEAEWETDTMVANASINMFSKCGCLDR 277

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCA 308
           A   F ++++    SW AM++   + G+  +ALE F +M  EV  +    TL+  L +CA
Sbjct: 278 AHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKT--TLVIALSTCA 335

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSW 367
               L +GKS+H ++ R  +G E D + G AL+  Y+ CG + E  +V   I  +N++SW
Sbjct: 336 APESLEDGKSIHSRVAR--LGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSW 393

Query: 368 NMLISEYAR-KGMSKEALELLVQMQTWGLMPDSFSVASSLSA--CGNVGSLQLGLQIHGH 424
           N +I+ Y R + +   ALE+   M   G+ P   +  + +SA  C +VG      Q+HG 
Sbjct: 394 NNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGK-----QLHGW 448

Query: 425 VIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           ++      D F+ S+L++MY + G    A  +FE+I ++ V  WN+++     +G   EA
Sbjct: 449 IVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREA 508

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +  F +M L     +  TFL A+ A S   ++  G+ +H  +   G+  D  +  AL  M
Sbjct: 509 LEWFSRMLLEGASGNRATFLLALSAVSP-DRVSYGRKLHGLIAESGLEADNNVANALISM 567

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YA+C  L+ A+  FD + ++++VSW+++I      G   +A  LF++M    ++P+ VTF
Sbjct: 568 YARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTF 624

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
             +L AC+   +  EGK   +  R  G+E ++     ++ + S+ G++  A ++  ++  
Sbjct: 625 TTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEA 684

Query: 664 PANGSIWGALLNG 676
           P   + W A+L G
Sbjct: 685 P-TLACWNAMLGG 696



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 174/624 (27%), Positives = 305/624 (48%), Gaps = 25/624 (4%)

Query: 79  SILLYHKMIREQATISN--FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
           ++ L+ +    Q ++S+    +  ++  C+    L     V+  I   G   D     S+
Sbjct: 10  TLQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASV 69

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  + +   + DA +VF++M  R +V W+S++ ++ D+ DV      F  M  EGV PD 
Sbjct: 70  VRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDR 129

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           VT +S+  AC    SL     +H  ++ + ++ D  +GN+ + M +KC DL  A R F +
Sbjct: 130 VTFISILNACE---SLAQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQR 186

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           + +R   SWT M++ Y R+G   +A   +++ML     PN IT + VL +C+     R+ 
Sbjct: 187 MPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSS---ARDA 243

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
             V+  ++      +   +  A I  +++CG +     V H +   ++ SWN +++  A+
Sbjct: 244 DLVYGNVVEAEWETD-TMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQ 302

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ 436
            G S EALEL  +M +  +  D  ++  +LS C    SL+ G  IH  V ++  + + V 
Sbjct: 303 HGFSSEALELFRRMPS-EVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVA 361

Query: 437 -SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL--EAINLFHQMYLN 493
            ++L+ MYS+CG    A  +F+ I  K+VV WN+MI   Y    SL   A+ +F  M L+
Sbjct: 362 GTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAA-YGRDESLHSRALEIFRLMLLD 420

Query: 494 CLEMDEVTFLTAIQA--CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            +     T L  + A  C ++     GK +H  ++  G+  D +I +AL +MY + G L 
Sbjct: 421 GVRPTRTTALNVVSAVECQSV-----GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLG 475

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+RVF+ + ER+V +W+A++     HGQ  +A   F +ML  G   N  TF+  L A S
Sbjct: 476 DARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVS 535

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKMIHSMPFPANGS 668
               V  G+     +   G+E D      ++ + +R   +E A   F  +      +  S
Sbjct: 536 -PDRVSYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTS 594

Query: 669 IWGALLNGCRIHKRIDVMKTIEKE 692
           +  A ++     + ID+ + +E E
Sbjct: 595 VIAACVDLGSCQEAIDLFQRMELE 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 11/272 (4%)

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D F  +S++ M+ KC   + A  +FE++  +S+V+W SM+  F  + +   A   F +M 
Sbjct: 62  DGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQ 121

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L  +  D VTF++ + AC ++ Q   G+ VH  ++   +  D+ I  AL  M AKC DL 
Sbjct: 122 LEGVLPDRVTFISILNACESLAQ---GELVHRLIVDKNLESDVVIGNALMKMLAKCYDLD 178

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A R F  M  R+V+SW+ M+  Y  +G + +A   + +ML  G+ PN +TF+ +L ACS
Sbjct: 179 GAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACS 238

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
              S  +    +  +     E D       +++ S+ G ++ A  + H M      S W 
Sbjct: 239 ---SARDADLVYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKS-WN 294

Query: 672 ALLNGCRIH----KRIDVMKTIEKELSVTGTN 699
           A++     H    + +++ + +  E++V  T 
Sbjct: 295 AMVAALAQHGFSSEALELFRRMPSEVAVDKTT 326


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 187/530 (35%), Positives = 294/530 (55%), Gaps = 44/530 (8%)

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  I++     W  M+  +  S     ALE +V+M+ +   PN  +   +L SCA    
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA-------------- 358
             EG+ +H Q+++ G G +  Y+  +LI  YA  G + +  KV  A              
Sbjct: 80  FEEGRQIHAQVLKLGCGLDR-YVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALIT 138

Query: 359 -----------------IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
                            I ER+++SWN +I+ Y   G  +EALEL  +M    + PD  +
Sbjct: 139 GYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGT 198

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS-----SLIDMYSKCGFKNLAYLLF 456
           + S +SAC   GS++LG Q+H  V   D    F  S     +LID+YSKCG    A+ LF
Sbjct: 199 LVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLF 258

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E +  K VV WN++I G+       EA+ LF +M  +    ++VT L+ + AC+++G ++
Sbjct: 259 EGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID 318

Query: 517 KGKWVH----HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
            G+W+H     KL   GV  +  + T+L DMYAKCGD++ A +VF+SM  R++ SW+AMI
Sbjct: 319 IGRWIHVYIDKKL--KGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             + MHG+ N A  LF +M  + ++P+++TF+ +L ACSHSG ++ G+  F +M + + +
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            P L+HY CM+DLL  SG  + A +MIH+MP   +G IW +LL  C+ H  +++ ++  +
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +L      ++G Y LLSNIYA  G W++  +VR ++   G+KKVPG S+I
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSI 546



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 257/549 (46%), Gaps = 83/549 (15%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF+T +EP+  +W  +++ +  ++    ++ +Y +M+      +++ +P +L++C+    
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA--------------------- 149
              G ++H +++K G   D  + TS++  Y   G L+DA                     
Sbjct: 80  FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139

Query: 150 ----------RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
                     RKVFD++T RDVVSW+++I  Y +N    E L++F  M+R  V PD  T+
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199

Query: 200 LSLAEACGELCSLRPARSIHG--------HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           +S+  AC +  S+   R +H         H     +KI     N+ I +YSKCGD+ +A 
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKI----VNALIDLYSKCGDVETAF 255

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F  +  +   SW  +I  Y  +  +++AL  F +ML   E PN +TL++VL +CA LG
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315

Query: 312 WLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
            +  G+ +H  I +K  G   +  L  +LI+ YA+CG +    +V +++  R++ SWN +
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           I  +A  G +  A +L  +M+   + PD  +    LSAC + G L LG QI         
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI--------- 426

Query: 431 KDEFVQSSLIDMYSKCGFKNLA--YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
                            FK++   Y L  +++      +  MI     +G   EA  + H
Sbjct: 427 -----------------FKSMTQDYNLTPKLEH-----YGCMIDLLGHSGLFKEAEEMIH 464

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYIDTALTDMYAKC 547
            M    +E D V + + ++AC   G LE  +    KLI         Y+   L+++YA  
Sbjct: 465 TM---PMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV--LLSNIYATA 519

Query: 548 GDLQTAQRV 556
           G  +   RV
Sbjct: 520 GRWEDVARV 528



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 243/495 (49%), Gaps = 41/495 (8%)

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           F  L  A  VF+ +   +++ W++++  +  ++D    L+M+  MV  G  P+  +   L
Sbjct: 11  FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK------------------- 243
            ++C +  +    R IH  VL+    +D  +  S I MY++                   
Sbjct: 71  LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 244 --C----------GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
             C          GD  SA + F +I +R   SW AMI+ Y  +G +++ALE F +M+  
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGK 348
              P+  TL++V+ +CA  G +  G+ VH  +        +     +  ALI+ Y++CG 
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +     +   +  ++++SWN LI  Y    + KEAL L  +M   G  P+  ++ S L A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310

Query: 409 CGNVGSLQLGLQIHGHV---IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           C ++G++ +G  IH ++   +K    +  +++SLIDMY+KCG    A+ +F  +  +S+ 
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN+MI GF  +G +  A +LF +M  N +E D++TF+  + ACS+ G L+ G+ +   +
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430

Query: 526 IS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLND 583
              Y +   +     + D+    G  + A+ +  +M  E + V W +++     HG L  
Sbjct: 431 TQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLEL 490

Query: 584 AASLFKQMLDSGIKP 598
           A S  ++++   I+P
Sbjct: 491 AESFAQKLIK--IEP 503



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 199/428 (46%), Gaps = 40/428 (9%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H D  + T LI  YA  G  RS+R VFD   E D   W  +I  Y+ N  +EE++ L+ +
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC----GFDKDDVIQTSILCTYG 141
           M+R           SV+ AC+  G +  G +VH  +       GF     I  +++  Y 
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
           + G ++ A  +F+ ++ +DVVSW+++I  Y       E L +F  M+R G  P+ VT+LS
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306

Query: 202 LAEACGELCSLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
           +  AC  L ++   R IH ++ +  + +  +  L  S I MY+KCGD+ +A + F  +  
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           R  +SW AMI  +   G    A + F +M   + EP+ IT + +L +C+  G L  G+  
Sbjct: 367 RSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ- 425

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
               I K M  +Y+ L P L E Y                          +I      G+
Sbjct: 426 ----IFKSMTQDYN-LTPKL-EHYG------------------------CMIDLLGHSGL 455

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSL 439
            KEA E++    T  + PD     S L AC   G+L+L       +IKI+ ++      L
Sbjct: 456 FKEAEEMI---HTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLL 512

Query: 440 IDMYSKCG 447
            ++Y+  G
Sbjct: 513 SNIYATAG 520



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 137/266 (51%), Gaps = 38/266 (14%)

Query: 448 FKNLAYLL--FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           F  L Y +  FE IQ+ ++++WN+M+ G   + + + A+ ++ +M       +  +F   
Sbjct: 11  FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK------------------- 546
           +++C+     E+G+ +H +++  G   D Y+ T+L  MYA+                   
Sbjct: 71  LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 547 --C----------GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
             C          GD ++A++VFD ++ER+VVSW+AMI  Y  +G+  +A  LFK+M+ +
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGK----FYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
            ++P+E T ++++ AC+ SGS+E G+    +  +     G    L+    ++DL S+ GD
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNG 676
           +E AF +   +      S W  L+ G
Sbjct: 251 VETAFGLFEGLSCKDVVS-WNTLIGG 275


>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
          Length = 1118

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 199/650 (30%), Positives = 342/650 (52%), Gaps = 21/650 (3%)

Query: 101  VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD--ARKVFDKMTS 158
            +L A ++     +   +H  I++ G      + +S   T     C     AR +FD++ S
Sbjct: 477  LLEAAAATSTPLAAAHLHANILRSGL-----LHSSHHLTAHVLACYPPGLARDLFDEIRS 531

Query: 159  RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
                  ++++ ++         + +     R  V  D  T+  L  AC  L SL   R++
Sbjct: 532  PTPRLANALLRAHIRARQWRAAILLGQ---RLRVRRDGFTLSLLLRACTALPSLTHGRAV 588

Query: 219  HGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
            H   +R      D  +  + + MYS+CGD+  A   +  +EK      T++++ Y ++G 
Sbjct: 589  HAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQNGM 648

Query: 278  FQKALESFVKML---EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
             ++ALE F + +    V   P  +TL++V+ + A LG +R+G++ H  ++R  +   YD 
Sbjct: 649  AEEALEFFARNVVGQGVLVTP--VTLVSVMSAAAQLGHVRKGQACHAYVVRNSL--SYDL 704

Query: 335  -LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
             L  A++ FY + G +    ++   + +R++++W+ +I  Y + G +     +  +M   
Sbjct: 705  ALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYREMVKA 764

Query: 394  GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
             + P+S ++ S L AC  V   + G ++H   + I C+ E  V ++L+DMY KC     A
Sbjct: 765  RVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSCHEEA 824

Query: 453  YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
              LF R+ +K VV W ++I G  QN    E+++ F  M LN    D VT +  + ACS  
Sbjct: 825  MRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEF 884

Query: 513  GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
            G       +H  L+  G   + ++  AL D+Y+KCGDL +A RVF+  +E+++V W +MI
Sbjct: 885  GGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMI 944

Query: 573  DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
              YG HG   +A +L+++M+ S I+PN VTF+++L ACSHSG V+EG   F++M ++FGV
Sbjct: 945  AGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGV 1004

Query: 632  EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
             P+ +H + MVDLL R+G+++ A ++I  M   A    W ALL  CR H    + +   K
Sbjct: 1005 VPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAACRKHNNTKMSEVAAK 1064

Query: 692  ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             L     +  GYY LL+N+YA +  W+     R +++   L+KV GYS++
Sbjct: 1065 NLLKLDPDHVGYYNLLTNLYAFDEKWENVKDTRDMVKGRDLRKVAGYSSV 1114



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/598 (26%), Positives = 301/598 (50%), Gaps = 16/598 (2%)

Query: 16   LHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
            LHA++L +GL H     +  ++  Y        +R +FD  + P   +   L++ ++   
Sbjct: 493  LHANILRSGLLHSSHHLTAHVLACYPP----GLARDLFDEIRSPTPRLANALLRAHIRAR 548

Query: 75   FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDDVIQ 133
             +  +ILL  ++   +     F    +LRAC++L  L  G  VH   ++ C   +D  + 
Sbjct: 549  QWRAAILLGQRL---RVRRDGFTLSLLLRACTALPSLTHGRAVHAAAVRSCTASEDAFVA 605

Query: 134  TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVREGV 192
            T+I+  Y   G +  A   +  +   D+V  +S++  Y  N    E L+ F  ++V +GV
Sbjct: 606  TAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGV 665

Query: 193  EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
                VT++S+  A  +L  +R  ++ H +V+R  +  D  L N+ +  Y K GDL ++ R
Sbjct: 666  LVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMR 725

Query: 253  TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
             F  +  R   +W+ MI  Y + G        + +M++ + +PN +TL++VL +CA +  
Sbjct: 726  LFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVD 785

Query: 313  LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              EGK +H   +  G   E   +  AL++ Y +C    E  ++ H + ++++++W  +I 
Sbjct: 786  AEEGKRLHRVAVSIGCELELG-VATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIG 844

Query: 373  EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
               +  +  E+L     M     +PD+ ++   L+AC   G  +L + +HG++++    +
Sbjct: 845  GLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNN 904

Query: 433  E-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
              FV ++L+D+YSKCG  + A  +FE   +K +V+W SMI G+  +G   EA+ L+ +M 
Sbjct: 905  NAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMI 964

Query: 492  LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDL 550
             + ++ + VTFL+ + ACS+ G +++G  +   +   +GV  +    +A+ D+  + G+L
Sbjct: 965  ASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGEL 1024

Query: 551  QTAQRVFDSMSERNVV-SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            Q A RV   M  R V  +W A++     H     +    K +L   + P+ V + N+L
Sbjct: 1025 QEAIRVIRDMDGRAVAHTWCALLAACRKHNNTKMSEVAAKNLLK--LDPDHVGYYNLL 1080



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 239/486 (49%), Gaps = 9/486 (1%)

Query: 3    LFRSCTNLRKLTR---LHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
            L R+CT L  LT    +HA  + +     D   +T +++ Y+  G +  +   +   ++P
Sbjct: 572  LLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKP 631

Query: 59   DSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT-ISNFIYPSVLRACSSLGDLGSGEKV 117
            D  +   ++  Y  N   EE++  + + +  Q   ++     SV+ A + LG +  G+  
Sbjct: 632  DIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQAC 691

Query: 118  HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
            H  +++     D  +  ++L  Y + G L  + ++F+ MT RDV++WS +I  Y  + D 
Sbjct: 692  HAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDA 751

Query: 178  SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
              G +M+  MV+  V+P+ VT++S+ +AC  +      + +H   +    +++  +  + 
Sbjct: 752  HTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATAL 811

Query: 238  IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
            + MY KC     A R F ++ K+   +W A+I    ++    ++L SF  ML     P+ 
Sbjct: 812  VDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDA 871

Query: 298  ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            +T++ VL +C+  G  R    +H  ++R G      ++  AL++ Y++CG +    +V  
Sbjct: 872  VTMVKVLAACSEFGGNRLAICLHGYLVRNGFN-NNAFVAAALLDLYSKCGDLDSAVRVFE 930

Query: 358  AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
               E++I+ W  +I+ Y   G+ +EA+ L  +M    + P++ +  S LSAC + G +Q 
Sbjct: 931  GTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQE 990

Query: 418  GLQIHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV-MWNSMICGF 474
            G+QI   + ++     +   QS+++D+  + G    A  +   +  ++V   W +++   
Sbjct: 991  GIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAAC 1050

Query: 475  YQNGNS 480
             ++ N+
Sbjct: 1051 RKHNNT 1056


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 189/532 (35%), Positives = 294/532 (55%), Gaps = 3/532 (0%)

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L+  + IH  +LR  +  D  L N  +      G+   + R   + ++     +  MI  
Sbjct: 23  LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
              +  FQ+++E +  M +    P+  T   VL +CA +     G  +H  +++ G   +
Sbjct: 83  LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             ++  +LI  Y +CG +    KV   I ++N  SW   IS Y   G  +EA+++  ++ 
Sbjct: 143 A-FVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKN 450
             GL PDSFS+   LSAC   G L+ G  I  ++ +    ++ FV ++L+D Y KCG   
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNME 261

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F+ + +K++V W+SMI G+  NG   EA++LF +M    L+ D    +  + +C+
Sbjct: 262 RARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCA 321

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G LE G W  + +       +  + TAL DMYAKCG +  A  VF  M +++ V W+A
Sbjct: 322 RLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNA 381

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IF 629
            I    M G + DA  LF QM  SGIKP+  TF+ +L AC+H+G VEEG+ YFN+M  +F
Sbjct: 382 AISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVF 441

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            + P+++HY CMVDLL R+G ++ A ++I SMP  AN  +WGALL GCR+H+   +++ +
Sbjct: 442 TLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVV 501

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            K+L       +G Y LLSNIYA    W+E  K+RSIM   G+KK+PGYS I
Sbjct: 502 LKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWI 553



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 246/487 (50%), Gaps = 6/487 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L +  + L+ L  +HA LL  GL  D     +++      G+   S  + D  KEP+ F+
Sbjct: 16  LIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFL 75

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           +  +I+  + N+ F+ESI +YH M +E  +  +F +P VL+AC+ + D   G K+H  ++
Sbjct: 76  FNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVV 135

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G + D  ++ S++  Y + G +D+A KVFD +  ++  SW++ I+ Y       E + 
Sbjct: 136 KAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAID 195

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           MF  ++  G+ PD  +++ +  AC     LR    I  ++    +  +  +  + +  Y 
Sbjct: 196 MFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYG 255

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG++  A   F  + ++   SW++MI  Y  +G  ++AL+ F KML    +P+   ++ 
Sbjct: 256 KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVG 315

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           VL SCA LG L  G      +I      +   LG ALI+ YA+CG+M    +V   + ++
Sbjct: 316 VLCSCARLGALELGDWAS-NLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKK 374

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + + WN  IS  A  G  K+AL L  QM+  G+ PD  +    L AC + G ++ G +  
Sbjct: 375 DRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYF 434

Query: 423 GHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMI--CGFYQN 477
             +  +      ++    ++D+  + G  + A+ L + +  + + ++W +++  C  +++
Sbjct: 435 NSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRD 494

Query: 478 GNSLEAI 484
              +E +
Sbjct: 495 TQLVEVV 501


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 198/739 (26%), Positives = 374/739 (50%), Gaps = 7/739 (0%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F +  +L++   +H+ ++  GL +D   +  L+  YA+   +  +R +FD     D   W
Sbjct: 24  FCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSW 83

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             ++  +       +++ L+  MI      + F   S LR+C +LG+   G ++H   +K
Sbjct: 84  TTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVK 143

Query: 124 CGFDKDDVIQTSILCTYGEFGCLD-DARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGL 181
            G + +  + TS++  Y + GC   +A K+   +    DVVSW+++++S  +N    E  
Sbjct: 144 LGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAF 203

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           +++  M+  GV P+  T + L  A      L   + +H H++    +++  L  + + MY
Sbjct: 204 EIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMY 263

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           SKC  ++ A +      +     WT +IS + ++   ++A+  F  M      PN  T  
Sbjct: 264 SKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYS 323

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS-ECEKVIHAIG 360
           ++L + + +  L  G+  H ++I  G+  +  Y+G AL++ Y +C  ++    KV   I 
Sbjct: 324 SLLNASSSILSLDLGEQFHSRVIIVGLEDDL-YIGNALVDMYMKCSHITTNAVKVFREIT 382

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
             N++ W  LI+ +A K + +++ +L  +MQ  G+ P+SF++++ L AC    SL   + 
Sbjct: 383 SPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMM 441

Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +HGH+IK     D  V ++L+D Y+  G  + A+ +   +  +  + +  +     Q G+
Sbjct: 442 LHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGH 501

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
              A+ +   M  + ++MDE +  + + A + +G +E GK +H   +  G ++   +  +
Sbjct: 502 HGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNS 561

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L  +Y+KCG +  A R F  +SE +  SW+ +I  +  +G ++ A S F  M  +G+KP+
Sbjct: 562 LVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPD 621

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            +T ++++ ACSH G +E G  YF++M + + + P L HY C+VDLL R G +E A  +I
Sbjct: 622 SITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVI 681

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
             M F  +  I   LLN C +H  + + + + +       +D   Y LL+N+Y   G  D
Sbjct: 682 EKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSD 741

Query: 719 EFGKVRSIMEVTGLKKVPG 737
              K R +M   GL++ PG
Sbjct: 742 FGEKTRRLMRERGLRRSPG 760


>gi|15241649|ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g08490
 gi|9759343|dbj|BAB09998.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003927|gb|AED91310.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 849

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 211/786 (26%), Positives = 399/786 (50%), Gaps = 49/786 (6%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C ++  LT    LH  +   G       S  ++  YA+   +   + +F     
Sbjct: 25  LDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDS 84

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEK 116
            D  +W +++   +  +   E++  +  M   ++   S+  +  VL  C  LGD  +G+ 
Sbjct: 85  LDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +H  IIK G +KD ++  +++  Y +FG    DA   FD +  +DVVSW++IIA + +N 
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL---CSLRPARSIHGHVLRRK-IKIDG 231
            +++  + F  M++E  EP++ T+ ++   C  +    + R  R IH +V++R  ++   
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHV 263

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            + NS +  Y + G +  A   F ++  +   SW  +I+ Y  +  + KA + F  ++  
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHK 323

Query: 292 KE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
            +  P+ +T+I++L  CA L  L  GK +H  I+R     E   +G ALI FYA  G  S
Sbjct: 324 GDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTS 383

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
                   +  ++I+SWN ++  +A      + L LL  +    +  DS ++ S L  C 
Sbjct: 384 AAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCI 443

Query: 411 NVGSLQLGLQIHGHVIKI----DCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVV 465
           NV  +    ++HG+ +K     D ++  + ++L+D Y+KCG    A+ +F  + +++++V
Sbjct: 444 NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLV 503

Query: 466 MWNSMICGFYQNGN-------------------SL------------EAINLFHQMYLNC 494
            +NS++ G+  +G+                   SL            EAI +F ++    
Sbjct: 504 SYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARG 563

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  + VT +  +  C+ +  L   +  H  +I  G+  DI +   L D+YAKCG L+ A 
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAY 622

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            VF S + R++V ++AM+  Y +HG+  +A  ++  M +S IKP+ V    +L AC H+G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            +++G   ++++R + G++P ++ YAC VDL++R G ++ A+  +  MP   N +IWG L
Sbjct: 683 LIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTL 742

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L  C  + R+D+  ++   L    ++D G + L+SN+YA +  W+   ++R++M+   +K
Sbjct: 743 LRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMK 802

Query: 734 KVPGYS 739
           K  G S
Sbjct: 803 KPAGCS 808



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 305/629 (48%), Gaps = 46/629 (7%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           ++  V++AC+S+ DL SG  +HG + K G      +  S+L  Y +   +DD +K+F +M
Sbjct: 23  VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPA 215
            S D V W +I+ +    +   E ++ F +M   +  +P  VT   +   C  L      
Sbjct: 83  DSLDPVVW-NIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNR 274
           +S+H ++++  ++ D  +GN+ + MY+K G +   A   F  I  +   SW A+I+ ++ 
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG---WLREGKSVHCQIIRKGMGPE 331
           +     A  SF  ML+   EPN  T+  VL  CA +      R G+ +H  ++++     
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           + ++  +L+ FY   G++ E   +   +G ++++SWN++I+ YA      +A +L   + 
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321

Query: 392 TWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGF 448
             G + PDS ++ S L  C  +  L  G +IH ++++     +D  V ++LI  Y++ G 
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + AY  F  +  K ++ WN+++  F  +    + +NL H +    + +D VT L+ ++ 
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKD---IYIDTALTDMYAKCGDLQTAQRVFDSMSER-- 563
           C N+  + K K VH   +  G+  D     +  AL D YAKCG+++ A ++F  +SER  
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRT 501

Query: 564 ------------------------------NVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
                                         ++ +WS M+  Y      N+A  +F+++  
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            G++PN VT MN+L  C+   S+   +   +   I G   D++    ++D+ ++ G ++ 
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVR-QCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKH 620

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           A+ +  S     +  ++ A++ G  +H R
Sbjct: 621 AYSVFQS-DARRDLVMFTAMVAGYAVHGR 648



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 142/568 (25%), Positives = 260/568 (45%), Gaps = 29/568 (5%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G   D    L + +AC  +  L   R++HG V +        +  S + MY+KC  +   
Sbjct: 16  GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75

Query: 251 ERTFVKIEKRCTTSWTAM-----ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           ++ F +++      W  +     +SC   +  F KA+         + +P+ +T   VL 
Sbjct: 76  QKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMH-----FADEPKPSSVTFAIVLP 130

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKM-SECEKVIHAIGERN 363
            C  LG    GKS+H  II+ G+  E D L G AL+  YA+ G +  +       I +++
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGL--EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQLGLQ 420
           ++SWN +I+ ++   M  +A      M      P+  ++A+ L  C ++    + + G Q
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IH +V++        FV +SL+  Y + G    A  LF R+  K +V WN +I G+  N 
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308

Query: 479 NSLEAINLFHQM-YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYI 536
              +A  LFH + +   +  D VT ++ +  C+ +  L  GK +H  ++ +  + +D  +
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             AL   YA+ GD   A   F  MS ++++SW+A++D +    +     +L   +L+  I
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAI 428

Query: 597 KPNEVTFMNILWACSHS---GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
             + VT +++L  C +    G V+E   Y     +   E + +    ++D  ++ G++E 
Sbjct: 429 TLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEY 488

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A K+   +        + +LL+G       D  + +  E+S   T D   ++L+  IYAE
Sbjct: 489 AHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS---TTDLTTWSLMVRIYAE 545

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               +E   V   ++  G++  P   TI
Sbjct: 546 SCCPNEAIGVFREIQARGMR--PNTVTI 571


>gi|302816264|ref|XP_002989811.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
 gi|300142377|gb|EFJ09078.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
          Length = 756

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 213/755 (28%), Positives = 373/755 (49%), Gaps = 74/755 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM--- 71
           R+H H +  G+  +      LI  Y + G+L  +R + D  ++ + F W +++  Y    
Sbjct: 16  RIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSWTIMLAAYAQNG 75

Query: 72  -------------------WNNFF------EESIL----LYHKMIREQATISNFIYPSVL 102
                              WN+        E+ I     L+ +M  E        + ++L
Sbjct: 76  LDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGFQPDRVTFVTLL 135

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVV 162
             C+S  DL  G +VH   +  G D    +   ++  YG+   L++AR+VF+ +  ++ +
Sbjct: 136 DCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARRVFESLKRKNEI 195

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV 222
           SWSS++A+Y  N   +E +K+F  M  EG++PD VT++S+ +ACG+L + + +  IH  V
Sbjct: 196 SWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARV 255

Query: 223 LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI--EKRCTTSWTAMISCYNRSGWFQK 280
           L   ++ D  + N+ + MY K G L  A   F  +  + R   +W AMIS Y  +G   +
Sbjct: 256 LEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMISAYAHTGHHTR 315

Query: 281 ALESF-VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           A   F + +LE    P+  T+  +L +C  LG    G+ +HC     G+   +  +  +L
Sbjct: 316 AFGIFRIMLLEAAVTPSAATISAILAACLDLG---SGRRIHCLAASIGV-ESHPSVAISL 371

Query: 340 IEFYAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           +  Y+ C   ++    +   +  +++++WN +I+  A++G++ EA EL   M    + PD
Sbjct: 372 LGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELFKAMD---VEPD 428

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCG--------FK 449
            F+ AS L+ C +   L LG ++H  +          V ++L+ MYS+CG        F+
Sbjct: 429 GFTFASLLAVCCD---LDLGRRLHAGIATARLASRLIVDTALVGMYSRCGSLGDAAAVFE 485

Query: 450 NL-----------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
            +           A L+F+RI  K  V WNSMI  +  +G   +AI  +  M  +C   D
Sbjct: 486 GMEDRDTCGSLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATYRAM--DC-RPD 542

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           E T ++A+ A S +  L++G  +H + +  G+     +++ L  M+AKCG L  A  +F+
Sbjct: 543 EATIVSALAAASALADLDEGAAIHARALELGIATPA-VESTLASMHAKCGSLDAAMALFE 601

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
              E+++VSW+AM+  Y  HG  ++A +L  +M   GI PN VT   +L +CSH+G +E 
Sbjct: 602 KNREKDLVSWNAMVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVLASCSHAGLLER 661

Query: 619 GKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           G FY   + R  GV  + +HY  +V+LL R G +  A  ++  MP     ++W  L+  C
Sbjct: 662 GMFYVGWLSREHGVAVESEHYRFVVELLGRCGRLGEAEAVVRGMPLEPEPALWVTLVAAC 721

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            +H+ +      ++  +     D   Y LL+N+Y+
Sbjct: 722 VLHEEV---SRADRAAAGLDPGDAASYVLLANVYS 753



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 176/663 (26%), Positives = 308/663 (46%), Gaps = 104/663 (15%)

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           C  LG L +G+++H   ++CG  K+  ++  ++  YG+ G L++ARK+ D M   +V SW
Sbjct: 5   CVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSW 64

Query: 165 SSIIASYFDNA--------DVS--------------------EGLK----MFHSMVREGV 192
           + ++A+Y  N         D+S                    +G++    +F  M  EG 
Sbjct: 65  TIMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGF 124

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +PD VT ++L + C     LR  R +H   +   + +   + N  + MY KC DL  A R
Sbjct: 125 QPDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARR 184

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  ++++   SW+++++ Y ++    +A++ F  M     +P+ +TLI+VL +C  L  
Sbjct: 185 VFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRA 244

Query: 313 LREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE--RNILSWNM 369
            ++   +H +++   +  E D  +  AL+  Y + G++ +   +   +GE  R++++WN 
Sbjct: 245 SKQSSQIHARVLEADL--ERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNA 302

Query: 370 LISEYARKGMSKEALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
           +IS YA  G    A  +  + +    + P + ++++ L+AC ++GS   G +IH     I
Sbjct: 303 MISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACLDLGS---GRRIHCLAASI 359

Query: 429 DCKDE-FVQSSLIDMYSKCGFK-NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
             +    V  SL+ MYS+C      A  LF  +++KS+V WN+MI    Q G + EA  L
Sbjct: 360 GVESHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQEL 419

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F  M    +E D  TF + +  C +   L+ G+ +H  + +  +   + +DTAL  MY++
Sbjct: 420 FKAMD---VEPDGFTFASLLAVCCD---LDLGRRLHAGIATARLASRLIVDTALVGMYSR 473

Query: 547 CGDLQTAQRVFDSMSER-------------------NVVSWSAMIDCYGMHGQLNDAASL 587
           CG L  A  VF+ M +R                   + VSW++MI  Y  HG+  DA + 
Sbjct: 474 CGSLGDAAAVFEGMEDRDTCGSLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIAT 533

Query: 588 FKQMLDSGIKPNEVTFMNILW-----------ACSHSGSVEEG----------------- 619
           ++ M     +P+E T ++ L            A  H+ ++E G                 
Sbjct: 534 YRAM---DCRPDEATIVSALAAASALADLDEGAAIHARALELGIATPAVESTLASMHAKC 590

Query: 620 KFYFNAMRIF--GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA---NGSIWGALL 674
                AM +F    E DL  +  MV   ++ GD   A  +IH M       NG     +L
Sbjct: 591 GSLDAAMALFEKNREKDLVSWNAMVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVL 650

Query: 675 NGC 677
             C
Sbjct: 651 ASC 653



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 163/625 (26%), Positives = 292/625 (46%), Gaps = 37/625 (5%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  +LR+  ++H   + +G+   P  +  ++  Y +   L  +R VF++ K  +   W+ 
Sbjct: 140 SFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARRVFESLKRKNEISWSS 199

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           L+  Y  NN   E++ L+  M  E          SVL AC  L       ++H R+++  
Sbjct: 200 LVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAD 259

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKM--TSRDVVSWSSIIASYFDNADVSEGLKM 183
            ++D V+  +++  YG+ G L+ A  +F+ M   SRDV++W+++I++Y      +    +
Sbjct: 260 LERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMISAYAHTGHHTRAFGI 319

Query: 184 FHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           F  M+ E  V P   T+ ++  AC +L S    R IH       ++    +  S + MYS
Sbjct: 320 FRIMLLEAAVTPSAATISAILAACLDLGS---GRRIHCLAASIGVESHPSVAISLLGMYS 376

Query: 243 KCGDLLSAERT-FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +C   +++ R  F+ +E++   +W  MI+   + G   +A E F K ++V  EP+  T  
Sbjct: 377 RCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELF-KAMDV--EPDGFTFA 433

Query: 302 TVLGSC----------AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA-----EC 346
           ++L  C          AG+   R    +       GM      LG A   F        C
Sbjct: 434 SLLAVCCDLDLGRRLHAGIATARLASRLIVDTALVGMYSRCGSLGDAAAVFEGMEDRDTC 493

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G + + + V   I +++ +SWN +IS YA  G  K+A+     M      PD  ++ S+L
Sbjct: 494 GSLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATYRAMDC---RPDEATIVSAL 550

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           +A   +  L  G  IH   +++      V+S+L  M++KCG  + A  LFE+ ++K +V 
Sbjct: 551 AAASALADLDEGAAIHARALELGIATPAVESTLASMHAKCGSLDAAMALFEKNREKDLVS 610

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG----KWVH 522
           WN+M+  + Q+G+  EA+ L H+M L  +  + VT    + +CS+ G LE+G     W+ 
Sbjct: 611 WNAMVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVLASCSHAGLLERGMFYVGWLS 670

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
            +   +GV  +      + ++  +CG L  A+ V   M  E     W  ++    +H ++
Sbjct: 671 RE---HGVAVESEHYRFVVELLGRCGRLGEAEAVVRGMPLEPEPALWVTLVAACVLHEEV 727

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNI 606
           +  A      LD G   + V   N+
Sbjct: 728 SR-ADRAAAGLDPGDAASYVLLANV 751



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 27/225 (12%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAE-------------------MG 43
           L   C +L    RLHA +    L       T L+  Y+                     G
Sbjct: 435 LLAVCCDLDLGRRLHAGIATARLASRLIVDTALVGMYSRCGSLGDAAAVFEGMEDRDTCG 494

Query: 44  SLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM--IREQATISNFIYPSV 101
           SL  ++LVFD   + D+  W  +I  Y  +  ++++I  Y  M    ++ATI + +  + 
Sbjct: 495 SLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATYRAMDCRPDEATIVSALAAAS 554

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
             A         G  +H R ++ G      +++++   + + G LD A  +F+K   +D+
Sbjct: 555 ALADLD-----EGAAIHARALELGI-ATPAVESTLASMHAKCGSLDAAMALFEKNREKDL 608

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
           VSW++++A+Y  + D SE L + H M  EG+ P+ VT+  +  +C
Sbjct: 609 VSWNAMVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVLASC 653



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 7/227 (3%)

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C  +G LE GK +H   +  G+ K+ +++  L +MY KCG L+ A+++ D M + NV SW
Sbjct: 5   CVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSW 64

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF-YFNAMR 627
           + M+  Y  +G L+ A  +F     S  K + V++ ++L  CS +    +G +  F  M 
Sbjct: 65  TIMLAAYAQNG-LDSAKRVFDL---SHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMD 120

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHKRIDVM 686
           + G +PD   +  ++D  +   D+    + +H     +   +   + N    ++ + D +
Sbjct: 121 LEGFQPDRVTFVTLLDCCASFADLRRG-RQVHQCAVASGMDLLPTVANCVVNMYGKCDDL 179

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           +   +        +   ++ L   YA+     E  K+   M++ GLK
Sbjct: 180 EEARRVFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLK 226


>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
 gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 209/679 (30%), Positives = 353/679 (51%), Gaps = 18/679 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAE-MGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           ++H  +L +    D      LI  Y + +G +  +R VFD  +  +S  W  ++  Y   
Sbjct: 64  QIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQR 123

Query: 74  NFFEESILLYHKMIREQATIS----NFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGFD 127
                   L+  M    + +S     + + S++ A  S  D G     ++  RI K G  
Sbjct: 124 GDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGLL 183

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            +  + +++   +   G  D ARK+F++MT+R+ VS + ++          E +++F   
Sbjct: 184 ANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKE- 242

Query: 188 VREGVEPDFVTMLSLAEACGELCSL----RPARSIHGHVLRRKIK-IDGPLGNSFIVMYS 242
            R  V+ +  + + L  AC E   L    R  R +HG+ +R  +      +GN  I MY+
Sbjct: 243 TRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYA 302

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCGD+  A   F  +  + + SW +MI+  +++  F+ A++S+  M +    P+  TLI+
Sbjct: 303 KCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLIS 362

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
            L SCA LG +  G+  H + I+ G+  +   +   L+  YAE G ++EC+KV   + ER
Sbjct: 363 ALSSCASLGCILLGQQTHGEGIKLGLDMDVS-VSNTLLALYAETGHLAECQKVFSWMLER 421

Query: 363 NILSWNMLISEYARKGMS-KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           + +SWN +I   A  G S  EA+E+ ++M   G  P+  +  + L+   ++ + +L  QI
Sbjct: 422 DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQI 481

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGFYQNGN 479
           H  ++K + KD+  ++++L+  Y K G       +F R+ +++  V WNSMI G+  N  
Sbjct: 482 HALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDL 541

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
             +A++L   M      +D  TF T + AC+ +  LE+G  VH   I   +  D+ I +A
Sbjct: 542 LCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSA 601

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
           L DMY+KCG +  A R F+ M  RN+ SW++MI  Y  HG  ++A  LF +M  SG  P+
Sbjct: 602 LVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPD 661

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            +TF+ +L ACSH G V+EG  YF +M  ++G+ P ++HY+CMVDLL R+G+++     I
Sbjct: 662 HITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFI 721

Query: 659 HSMPFPANGSIWGALLNGC 677
           + MP   N  IW  +L  C
Sbjct: 722 NKMPIKPNILIWRTVLGAC 740



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 196/707 (27%), Positives = 349/707 (49%), Gaps = 31/707 (4%)

Query: 58  PD--SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRAC--SSLGDLGS 113
           PD     WA LI  Y  N   +++  +  +MI E    + F + S +RAC  S L  L  
Sbjct: 2   PDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQL 61

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEF-GCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           G ++HG I+K  +  D  +   ++  YG++ G +D AR VFD++  R+ + W+SI++ Y 
Sbjct: 62  GMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYS 121

Query: 173 DNADVSEGLKMFHSMVRE----GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
              D +   ++F SM        ++P+  T  SL  A     S+    S+ G +L R IK
Sbjct: 122 QRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAA--CSSVDSGLSLLGQILAR-IK 178

Query: 229 IDGPLGNSFIVM-----YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
             G L N ++       +S+ G    A + F ++  R   S   ++    R    ++A+E
Sbjct: 179 KSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVE 238

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWL----REGKSVHCQIIRKGMGPEYDYLGPAL 339
            F +   +  + N+ + + +L +CA    L    R+G+ VH   IR G+      +G  L
Sbjct: 239 VFKETRHLV-DINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGL 297

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           I  YA+CG +     V   + +++ +SWN +I+   +    ++A++    M+  GLMP +
Sbjct: 298 INMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSN 357

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFER 458
           F++ S+LS+C ++G + LG Q HG  IK+    D  V ++L+ +Y++ G       +F  
Sbjct: 358 FTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSW 417

Query: 459 IQQKSVVMWNSMICGFYQNGNSL-EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           + ++  V WN++I     +G S+ EAI +F +M       + VTF+  +   S++   + 
Sbjct: 418 MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKL 477

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYG 576
              +H  ++ Y V+ D  I+ AL   Y K G+++  + +F  MSE R+ VSW++MI  Y 
Sbjct: 478 SHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYI 537

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDL 635
            +  L  A  L   M+  G + +  TF  +L AC+   ++E G + +  A+R   +E D+
Sbjct: 538 HNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRAC-LESDV 596

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
              + +VD+ S+ G I+ A +  + MP   N   W ++++G   H   D    +   + +
Sbjct: 597 VIGSALVDMYSKCGRIDYASRFFNLMPMR-NLYSWNSMISGYARHGYGDNALRLFTRMKL 655

Query: 696 TGT-NDNGYYTLLSNIYAEEGNWDE-FGKVRSIMEVTGL-KKVPGYS 739
           +G   D+  +  + +  +  G  DE F   +S+ EV GL  +V  YS
Sbjct: 656 SGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYS 702



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 250/539 (46%), Gaps = 22/539 (4%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE--LCSLR 213
           M  R+ V+W+ +I+ Y  N    +   +   M+ EG  P+     S   AC E  LC L+
Sbjct: 1   MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSK-CGDLLSAERTFVKIEKRCTTSWTAMISCY 272
               IHG +L+     D  L N  I MY K  G +  A   F +IE R +  W +++S Y
Sbjct: 61  LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120

Query: 273 NRSGWFQKALESFVKMLEVKE----EPNLIT---LITVLGSCAGLGWLREGKSVHCQIIR 325
           ++ G      E F  M         +PN  T   LIT   S    G    G+ +  +I +
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQ-ILARIKK 179

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G+     Y+G AL   ++  G      K+   +  RN +S N L+    R+   +EA+E
Sbjct: 180 SGLLANL-YVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVE 238

Query: 386 LLVQMQTW-GLMPDSFSVASSLSACGNVGSL----QLGLQIHGHVIKIDCKDE--FVQSS 438
           +  + +    +  DS+ +   LSAC     L    + G ++HG+ I+    D    V + 
Sbjct: 239 VFKETRHLVDINVDSYVIL--LSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNG 296

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           LI+MY+KCG  + A  +F  +  K  V WNSMI G  QN    +A+  ++ M    L   
Sbjct: 297 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 356

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
             T ++A+ +C+++G +  G+  H + I  G+  D+ +   L  +YA+ G L   Q+VF 
Sbjct: 357 NFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFS 416

Query: 559 SMSERNVVSWSAMIDCYGMHG-QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
            M ER+ VSW+ +I      G  +++A  +F +M+ +G  PN VTF+N+L   S   + +
Sbjct: 417 WMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSK 476

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
                   +  + V+ D      ++    +SG++E   ++   M    +   W ++++G
Sbjct: 477 LSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 535


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/620 (30%), Positives = 320/620 (51%), Gaps = 11/620 (1%)

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           ++ ++L  Y   G    AR++ D+M  R+ VS++ +I +Y         L+      R G
Sbjct: 45  LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V+ D  +  +   AC     LR  R++H   +   +     + NS + MYSKCG++  A 
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R F   E+R   SW +++S Y R+G  ++ +  F  M       N   L +V+  C+G G
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224

Query: 312 --WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
              +   ++VH  +I+ G+  +  +L  A+I+ YA+ G + E   +  ++ E N++ +N 
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDV-FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 370 LISEYAR------KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           +I+ + R      K ++ EAL L  ++Q+ G+ P  F+ +S L AC   G L+ G QIHG
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            VIK   + D+F+ S+LID+Y   G     +  F    +  +V W +M+ G  QN    +
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK 403

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A++LFH+     L+ D  T  + + AC+++     G+ +       G  +   +  +   
Sbjct: 404 ALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVH 463

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MYA+ GD+  A R F  M   +VVSWSA+I C+  HG   DA   F +M+D+ + PNE+T
Sbjct: 464 MYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEIT 523

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+ +L ACSH G V+EG  Y+  M + +G+ P ++H  C+VDLL R+G +  A   I + 
Sbjct: 524 FLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNS 583

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
            F A+  IW +LL  CRIH+ ++  + +   +       +  Y +L N+Y + G      
Sbjct: 584 IFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLAS 643

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           K R +M+  G+KK PG S I
Sbjct: 644 KTRDLMKQRGVKKEPGLSWI 663



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/624 (25%), Positives = 299/624 (47%), Gaps = 24/624 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPAS----TRLIESYAEMGSLRSSRLVFDTFK 56
           + L R+CT+LR    +HAH+        P AS      L+ +Y  +G    +R + D   
Sbjct: 15  LHLLRACTSLRHAAAVHAHIARA----HPAASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             ++  + +LI  Y        S+    +  R    +  F Y + L ACS  G L +G  
Sbjct: 71  RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VH   I  G      +  S++  Y + G + +AR+VFD    RD VSW+S+++ Y     
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL--CSLRPARSIHGHVLRRKIKIDGPLG 234
             E +++F  M R G+  +   + S+ + C      ++  A ++HG V++  +  D  L 
Sbjct: 191 REEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLV 250

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF---QKALESFVKMLEV 291
           ++ I MY+K G L+ A   F  +++     +  MI+ + R+      + A E+     EV
Sbjct: 251 SAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEV 310

Query: 292 KE---EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
           +    +P   T  +VL +C   G+L  GK +H Q+I+     E D++G ALI+ Y   G 
Sbjct: 311 QSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTF-QEDDFIGSALIDLYFNSGC 369

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           M +  +   +  + +I++W  ++S   +  + ++AL L  +    GL PD F+++S ++A
Sbjct: 370 MEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNA 429

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           C ++   + G QI     K    D F  + +S + MY++ G  + A   F+ ++   VV 
Sbjct: 430 CASLAVARAGEQIQCFATK-SGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVS 488

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKL 525
           W+++I    Q+G + +A++ F +M    +  +E+TFL  + ACS+ G +++G ++     
Sbjct: 489 WSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMT 548

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQR-VFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
             YG+   I   T + D+  + G L  A+  + +S+   + V W +++    +H  L   
Sbjct: 549 KDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERG 608

Query: 585 ASLFKQMLDSGIKPNEVTFMNILW 608
             +  ++++  ++P       IL+
Sbjct: 609 QLVANRIME--LEPTSSASYVILY 630


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 186/581 (32%), Positives = 316/581 (54%), Gaps = 44/581 (7%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS---FIVMYSKCGDLLSAERTFVK 256
           +SL + C    SLR  +  H H++R  +  D P   S    I   S    L  A + F +
Sbjct: 35  ISLIDRCS---SLRQLKQTHAHMIRTGMFSD-PYSASKLFAIAALSSFASLEYARKVFDE 90

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE--PNLITLITVLGSCAGLGWLR 314
           I +  + +W  +I  Y        ++ +F+ M+  + +  PN  T   ++ + A +  L 
Sbjct: 91  IPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLS 150

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+S+H   I+  +G +  ++  +LI  Y  CG +    KV   I E++++SWN +I+ +
Sbjct: 151 LGQSLHGMAIKSAVGSDV-FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 209

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            +KG   +ALEL  +M++  +     ++   LSAC  +  L+ G ++  ++ +       
Sbjct: 210 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNL 269

Query: 435 -VQSSLIDMYSKCGFKNLAYLLFERIQQKS------------------------------ 463
            + ++++DMY+KCG    A  LF+ +++K                               
Sbjct: 270 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKK 329

Query: 464 -VVMWNSMICGFYQNGNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWV 521
            +V WN++I  + QNG   EA+ +FH++ L   ++++++T ++ + AC+ +G LE G+W+
Sbjct: 330 DIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWI 389

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  +   G++ + Y+ +AL  MY+KCGDL+ A+ VF+S+ +R+V  WSAMI    MHG  
Sbjct: 390 HSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCG 449

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYAC 640
           ++A  +F +M ++ +KPN VTF N+  ACSH+G V+E +  F  M   +G+ P+ +HYAC
Sbjct: 450 SEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYAC 509

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           +VD+L RSG +E A K I +MP P + S+WGALL  C+IH  + + +     L      +
Sbjct: 510 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRN 569

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +G + LLSNIYA+ G WD   ++R  M VTGLKK PG S+I
Sbjct: 570 DGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSI 610



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 225/447 (50%), Gaps = 37/447 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRL--IESYAEMGSLRSSRLVFDTFKEPDS 60
           L   C++LR+L + HAH++ TG+  DP ++++L  I + +   SL  +R VFD   +P+S
Sbjct: 37  LIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNS 96

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMI--REQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           F W  LI+ Y        SI  +  M+    Q   + + +P +++A + +  L  G+ +H
Sbjct: 97  FTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 156

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G  IK     D  +  S++  Y   G LD A KVF  +  +DVVSW+S+I  +       
Sbjct: 157 GMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 216

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L++F  M  E V+   VTM+ +  AC ++  L   R +  ++   ++ ++  L N+ +
Sbjct: 217 KALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAML 276

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWT-------------------------------A 267
            MY+KCG +  A+R F  +E++   +WT                               A
Sbjct: 277 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNA 336

Query: 268 MISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           +IS Y ++G   +AL  F ++ L+   + N ITL++ L +CA +G L  G+ +H  I + 
Sbjct: 337 LISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKN 396

Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
           G+   + Y+  ALI  Y++CG + +  +V +++ +R++  W+ +I   A  G   EA+++
Sbjct: 397 GIKMNF-YVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDM 455

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVG 413
             +MQ   + P+  +  +   AC + G
Sbjct: 456 FYKMQEANVKPNGVTFTNVFCACSHTG 482



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH   + + +  D   +  LI  Y   G L S+  VF T KE D   W  +I  ++    
Sbjct: 155 LHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 214

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI-------------- 121
            ++++ L+ KM  E    S+     VL AC+ + DL  G +V   I              
Sbjct: 215 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANA 274

Query: 122 -----IKCG--------FD----KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
                 KCG        FD    KD+V  T++L  Y      + AR+V + M  +D+V+W
Sbjct: 275 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAW 334

Query: 165 SSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           +++I++Y  N   +E L +FH + +++ ++ + +T++S   AC ++ +L   R IH ++ 
Sbjct: 335 NALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIK 394

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           +  IK++  + ++ I MYSKCGDL  A   F  +EKR    W+AMI      G   +A++
Sbjct: 395 KNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVD 454

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEF 342
            F KM E   +PN +T   V  +C+  G + E +S+  ++    G+ PE D     +++ 
Sbjct: 455 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPE-DKHYACIVDV 513

Query: 343 YAECGKMSECEKVIHAI 359
               G + +  K I A+
Sbjct: 514 LGRSGYLEKAVKFIEAM 530


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 201/646 (31%), Positives = 330/646 (51%), Gaps = 41/646 (6%)

Query: 99  PSVLRACSSLGD-LGSGEKVHGRIIKCGFDKDDVIQTSILCT-YGEFGCLDDARKVFDKM 156
           P   R+   +G+ L +GE    R +       + + T+++ + Y + G L +ARK+FD M
Sbjct: 45  PDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGM 104

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R  V+W+ +I  Y       E  ++F  M R G EPD+VT ++L   C          
Sbjct: 105 VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---------- 154

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
             +GH           +GN    + ++   L    R  V            ++  Y +S 
Sbjct: 155 --NGH----------EMGNQITQVQTQIIKLGYDSRLIVG---------NTLVDSYCKSN 193

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
               A + F +M E+       T   VL +  GL  +  G+ +H  +I+        ++ 
Sbjct: 194 RLDLACQLFKEMPEIDS----FTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNV-FVS 248

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            AL++FY++   + +  K+   + E++ +S+N++IS YA  G  K A +L  ++Q     
Sbjct: 249 NALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFD 308

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLL 455
              F  A+ LS   N    ++G QIH   I      E  V +SL+DMY+KCG    A ++
Sbjct: 309 RKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMI 368

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F  +  +S V W +MI  + Q G   E + LF++M    +  D+ TF + ++A ++I  L
Sbjct: 369 FTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 428

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             GK +H  +I  G   +++  +AL D+YAKCG ++ A + F  M +RN+VSW+AMI  Y
Sbjct: 429 SLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAY 488

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
             +G+       FK+M+ SG++P+ V+F+ +L ACSHSG VEEG ++FN+M +I+ ++P 
Sbjct: 489 AQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPR 548

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL- 693
            +HYA +VD+L RSG    A K++  MP   +  +W ++LN CRIHK  ++ +    +L 
Sbjct: 549 REHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLF 608

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++    D   Y  +SNIYA  G W+   KV   M   G+KK+P YS
Sbjct: 609 NMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYS 654



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 148/616 (24%), Positives = 288/616 (46%), Gaps = 51/616 (8%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H +  ++  +I  Y + G+L  +R +FD   E  +  W +LI  Y   N F+E+  L+ +
Sbjct: 75  HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 134

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M R         + ++L  C+         +V  +IIK G+D   ++  +++ +Y +   
Sbjct: 135 MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 194

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           LD A ++F +M   D  ++++++ +     D+  G                         
Sbjct: 195 LDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLG------------------------- 229

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
                     + IH  V++     +  + N+ +  YSK   ++ A + F ++ ++   S+
Sbjct: 230 ----------QQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 279

Query: 266 TAMISCYNRSGWFQKALESFVKM----LEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             +IS Y   G  + A + F ++     + K+ P   T++++  +   L W   G+ +H 
Sbjct: 280 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP-FATMLSIASNT--LDW-EMGRQIHA 335

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
           Q I      E   +G +L++ YA+CGK  E E +   +  R+ + W  +IS Y +KG  +
Sbjct: 336 QTIVTTADSEI-LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 394

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLI 440
           E L+L  +M+   ++ D  + AS L A  ++ SL LG Q+H  +IK     + F  S+L+
Sbjct: 395 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 454

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           D+Y+KCG    A   F+ +  +++V WN+MI  + QNG +   +  F +M L+ L+ D V
Sbjct: 455 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 514

Query: 501 TFLTAIQACSNIGQLEKGKWVHH---KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           +FL  + ACS+ G +E+G W  +   ++     R++ Y   ++ DM  + G    A+++ 
Sbjct: 515 SFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY--ASVVDMLCRSGRFNEAEKLM 572

Query: 558 DSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
             M  + + + WS++++   +H     A     Q+ +     +   ++N+    + +G  
Sbjct: 573 AEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQW 632

Query: 617 EEGKFYFNAMRIFGVE 632
           E       AMR  GV+
Sbjct: 633 ENVSKVHKAMRDRGVK 648



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 220/456 (48%), Gaps = 14/456 (3%)

Query: 85  KMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG 144
           ++ +E   I +F + +VL A   L D+  G+++H  +IK  F  +  +  ++L  Y +  
Sbjct: 200 QLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHD 259

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLS 201
            + DARK+FD+M  +D VS++ II+ Y  +        +F  +     +     F TMLS
Sbjct: 260 SVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS 319

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           +A            R IH   +      +  +GNS + MY+KCG    AE  F  +  R 
Sbjct: 320 IA---SNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRS 376

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
              WTAMIS Y + G++++ L+ F KM +     +  T  ++L + A +  L  GK +H 
Sbjct: 377 AVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHS 436

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            II+ G      + G AL++ YA+CG + +  +    + +RNI+SWN +IS YA+ G ++
Sbjct: 437 FIIKSGFMSNV-FSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAE 495

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL---QIHGHVIKIDCKDEFVQSS 438
             L+   +M   GL PDS S    LSAC + G ++ GL        + K+D + E   +S
Sbjct: 496 ATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY-AS 554

Query: 439 LIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           ++DM  + G F     L+ E       +MW+S++     + N   A     Q++ N  E+
Sbjct: 555 VVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLF-NMEEL 613

Query: 498 -DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            D   ++      +  GQ E    VH  +   GV+K
Sbjct: 614 RDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKK 649



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 175/345 (50%), Gaps = 6/345 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H+ ++ T   ++   S  L++ Y++  S+  +R +FD   E D   + V+I  Y W+ 
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 290

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             + +  L+ ++         F + ++L   S+  D   G ++H + I    D + ++  
Sbjct: 291 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 350

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++  Y + G  ++A  +F  +T R  V W+++I++Y       EGL++F+ M +  V  
Sbjct: 351 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 410

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T  SL  A   + SL   + +H  +++     +   G++ + +Y+KCG +  A +TF
Sbjct: 411 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 470

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  R   SW AMIS Y ++G  +  L+SF +M+    +P+ ++ + VL +C+  G + 
Sbjct: 471 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 530

Query: 315 EGK---SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           EG    +   QI +  + P  ++   ++++     G+ +E EK++
Sbjct: 531 EGLWHFNSMTQIYK--LDPRREHYA-SVVDMLCRSGRFNEAEKLM 572


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 164/482 (34%), Positives = 285/482 (59%), Gaps = 5/482 (1%)

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLE-VKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
           +W +M+  +  S   ++AL+S+ +MLE  +  P+  T  ++L  CA L   + GK +H Q
Sbjct: 45  TWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQ 104

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           +++  +  +  Y+   L+  YA CG +     +   +G RN + W  +IS Y +     E
Sbjct: 105 VVKYMLHSDL-YIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNE 163

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLID 441
           AL L  +M+  G  PD  ++A+ +SAC  +  L +G+++H H+ ++D K    + S+L++
Sbjct: 164 ALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVN 223

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEV 500
           MY+KCG    A  +F+++  K V  W+++I G+ +N  S EA+ LF ++     +  +EV
Sbjct: 224 MYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEV 283

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T L  I AC+ +G LE G+WVH  +        + ++ +L DM++KCGD+  A+R+FDSM
Sbjct: 284 TILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSM 343

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG- 619
           S ++++SW++M++   +HG   +A + F  M  + ++P+E+TF+ +L ACSH+G V+EG 
Sbjct: 344 SYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGK 403

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
           K ++    ++GV    +HY CMVDLL R+G +  A + I  MP   +G+IWG++L  CR+
Sbjct: 404 KLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRV 463

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +  +++ +   + L      ++G Y LLSNIYA    W+E  KVR +M   G++K PG S
Sbjct: 464 YNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCS 523

Query: 740 TI 741
           ++
Sbjct: 524 SV 525



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 242/469 (51%), Gaps = 14/469 (2%)

Query: 20  LLVTGLHYDPPASTRLIESYAEMGSLRS--SRLVFDTFKEPDSFMWAVLIKCYMWNNFFE 77
           ++VTG  +  P+  +LI     MGSL    +  VF   +  D   W  +++ ++ +N   
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60

Query: 78  ESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
            ++  Y +M+ R +     F +PS+L+ C+ L +   G+ +HG+++K     D  I+T++
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           L  Y   G L  AR +F++M  R+ V W+S+I+ Y  N   +E L ++  M  +G  PD 
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
           VTM +L  AC EL  L     +H H+    +KI   LG++ + MY+KCGDL +A + F +
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLRE 315
           +  +   +W+A+I  Y ++    +AL+ F ++       PN +T++ V+ +CA LG L  
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ VH  I R   G     L  +LI+ +++CG +   +++  ++  ++++SWN +++  A
Sbjct: 301 GRWVHDYITRTQKGHSVS-LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLA 359

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV---IKIDCKD 432
             G+ +EAL     MQT  L PD  +    L+AC + G +Q G ++   +     +  K 
Sbjct: 360 LHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS 419

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQ--QKSVVMWNSMI--CGFYQN 477
           E     ++D+  + G    A   F R+   Q    +W SM+  C  Y N
Sbjct: 420 EHY-GCMVDLLCRAGLLAEAR-EFIRVMPLQPDGAIWGSMLGACRVYNN 466



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 216/450 (48%), Gaps = 35/450 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH  ++   LH D    T L+  YA  G L+S+R +F+     +  +W  +I  YM N+ 
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E++LLY KM  +  +       +++ AC+ L DLG G K+H  I +       V+ ++
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REGVEP 194
           ++  Y + G L  AR+VFD+++ +DV +WS++I  Y  N   +E L++F  +     + P
Sbjct: 221 LVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + VT+L++  AC +L  L   R +H ++ R +      L NS I M+SKCGD+ +A+R F
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIF 340

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +  +   SW +M++     G  ++AL  F  M     +P+ IT I VL +C+  G ++
Sbjct: 341 DSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQ 400

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           EGK +  +I       E  Y G  L   +  C                       ++   
Sbjct: 401 EGKKLFYEI-------EALY-GVRLKSEHYGC-----------------------MVDLL 429

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
            R G+  EA E +  M    L PD     S L AC    +L+LG +    +++++  ++ 
Sbjct: 430 CRAGLLAEAREFIRVMP---LQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDG 486

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           V   L ++Y++    N    + E + +K +
Sbjct: 487 VYILLSNIYARRKMWNEVKKVRELMNEKGI 516



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 121/226 (53%), Gaps = 2/226 (0%)

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM-DEVTFLTAIQACS 510
           AY +F   +   V+ WNSM+  F  +     A+  + +M      + D  TF + ++ C+
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            + + + GK +H +++ Y +  D+YI+T L +MYA CGDL++A+ +F+ M  RN V W++
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           MI  Y  +   N+A  L+K+M + G  P+EVT   ++ AC+    +  G    + +R   
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           ++      + +V++ ++ GD++ A ++   +    +   W AL+ G
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLS-DKDVYAWSALIFG 255



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 12/212 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C  L+ L    +LH+H+    +       + L+  YA+ G L+++R VFD   + D
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKD 245

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNF-----IYPSVLRACSSLGDLGSG 114
            + W+ LI  Y+ NN   E++ L+    RE A  SN         +V+ AC+ LGDL +G
Sbjct: 246 VYAWSALIFGYVKNNRSTEALQLF----REVAGGSNMRPNEVTILAVISACAQLGDLETG 301

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             VH  I +        +  S++  + + G +D A+++FD M+ +D++SW+S++     +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALH 361

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
               E L  FH M    ++PD +T + +  AC
Sbjct: 362 GLGREALAQFHLMQTTDLQPDEITFIGVLTAC 393


>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
 gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 209/731 (28%), Positives = 365/731 (49%), Gaps = 4/731 (0%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           T++H +++  G   D   S  LI+ YA+   LR    VFD   E +   W +++   +  
Sbjct: 73  TQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQC 132

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRAC-SSLGDLGSGEKVHGRIIKCGFDKDDVI 132
              E  + ++ +MIR+    + F   SV++AC +S+     G  VH   +K G +++  +
Sbjct: 133 EEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFV 192

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             S+L  Y + G +  A +VF+ +   DV  W+++I  Y       E +     M R+G+
Sbjct: 193 SCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGI 252

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
             D  T +++ + C  L      R IHG ++R ++++  P+ N+ + MY K G + S   
Sbjct: 253 FMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLV 312

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F K+  R   +W  +   +++    +     F   L     PN IT   +   C  L  
Sbjct: 313 VFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLN 372

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L  G    C  +  G+  E + +  ALI  ++ CGKM     V  +    NI+ WN LIS
Sbjct: 373 LDLGLQFCCLALHFGLFDEAN-ITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELIS 431

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            Y       EAL+    +   G+  + ++ ++ L  C    +  +  QIHG   K     
Sbjct: 432 GYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFAS 491

Query: 433 E-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
             +V SSLI  Y KCG  + +  +F  + +  +  W +MI  F   G   EAI   + + 
Sbjct: 492 HGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLI 551

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
               + DE    + + +C++     + K VH  +I  G    +++ +A+ D YAKCGD+Q
Sbjct: 552 EAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQ 611

Query: 552 TAQRVFD-SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           +A+  F+ S    +VV ++AMI  Y  HG++ +A   + +M  + ++P++ TF++++ AC
Sbjct: 612 SAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAAC 671

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
            H G VE+G   F +M ++G+EP    Y C+VD+ SR+G +E A ++I S+P+PA  +I 
Sbjct: 672 GHIGHVEKGCRLFKSMDLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAIL 731

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
            +LL+GCR++   ++ +   K+L     +++  + LL  +Y+E GNW++  K+R  M   
Sbjct: 732 RSLLSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFKVYSELGNWEDAAKMRREMAER 791

Query: 731 GLKKVPGYSTI 741
           GL+K PG+S I
Sbjct: 792 GLRKDPGHSWI 802



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/637 (24%), Positives = 297/637 (46%), Gaps = 17/637 (2%)

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFI-------YPSVLRACSSLGDLGSGEKVHGR 120
           K Y +NN   +++   +  I  +++ S F            L  C +      G ++HG 
Sbjct: 19  KVYKFNNIQLKNLHQLYSPISTKSSCSGFFIGKDSVALSKALSFCENSKSFILGTQIHGY 78

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           IIK GF  D  +  +++  Y +   L     VFD M  R+VVSW+ ++       +V  G
Sbjct: 79  IIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQCEEVELG 138

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP-ARSIHGHVLRRKIKIDGPLGNSFIV 239
           L++F  M+R+G  P+   + S+ +ACG     R     +H   L+  ++ +  +  S + 
Sbjct: 139 LEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVSCSVLS 198

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            Y+K GD+ +AER F  +E+     W AMI  Y + G+  +A+ +   M       +  T
Sbjct: 199 FYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYT 258

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP---ALIEFYAECGKMSECEKVI 356
            I V+  C+ LG    G+ +H  IIR     E +   P   AL++ Y + G M     V 
Sbjct: 259 FINVIQGCSLLGDFNFGRQIHGLIIR----SELELSAPVMNALMDMYFKNGGMKSGLVVF 314

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             + +R++++WN +   +++    K+   L        + P+  + +     CG + +L 
Sbjct: 315 KKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLD 374

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           LGLQ     +     DE  + S+LI+M+S+CG   +A+L+F+    +++++WN +I G+ 
Sbjct: 375 LGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYK 434

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
            N    EA+  F+ +    +E +E TF   ++ CS        + +H      G     Y
Sbjct: 435 LNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGY 494

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + ++L   Y KCG L  + +VF+ +   ++ +W  MI  +   G   +A      ++++G
Sbjct: 495 VCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAG 554

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
            KP+E    +IL +C+ + +  + K   + +   G E  +   + ++D  ++ GDI+ A 
Sbjct: 555 EKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAK 614

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEK 691
              +     ++  I+ A++     H R ++ + T +K
Sbjct: 615 MAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDK 651


>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
 gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
          Length = 551

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 179/541 (33%), Positives = 300/541 (55%), Gaps = 4/541 (0%)

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           + C E  + +P   IH  +L      +  L    I+ YSK GD +SA + F ++ +R   
Sbjct: 5   QLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVV 64

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW+A IS Y+++G +Q AL  F+ ML    + N  T  +VL +C GL  L+ G  +    
Sbjct: 65  SWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQ-GC 123

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           + K        +  AL++ +++CGKM +   +   + ER+++SWN +I  YA +G S ++
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDM 442
             +   M   G+ PD F+  S L A G    +    QIH  +I++       +  SLID 
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMYLNCLEMDEVT 501
           Y+KC     A+ L++ +  K ++   +++ G+ ++ N S +A++LF ++    +++D+V 
Sbjct: 244 YAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVI 303

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             +    C+NI  L  G+ +H   +      D+ +  AL DMYAK G+++ A R F+ M 
Sbjct: 304 LCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME 363

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
           E+NV+SW+++I  YG HG  ++A +LFK+M   G+KPN++TF+++L+AC+H G   EG  
Sbjct: 364 EKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWE 423

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            FN M   + + P  +H++CMVDL +R G +E A+ +I+ M    N S+WGA+L  C I+
Sbjct: 424 CFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIY 483

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
             + + +     L      ++  Y +L++IYA  G+WD   K+R +ME   LKK PGYS 
Sbjct: 484 GNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSF 543

Query: 741 I 741
           I
Sbjct: 544 I 544



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 247/483 (51%), Gaps = 15/483 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +L  G   +   ST+LI  Y+++G   S+R VFD   E     W+  I  Y  N  
Sbjct: 19  IHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGC 78

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           +++++L++  M+R     + F Y SVLRAC+ L  L  G ++ G + K  F  + ++Q++
Sbjct: 79  YQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSA 138

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  + + G ++DA  +F  M  RDVVSW++II +Y       +  +MF SM++EG+ PD
Sbjct: 139 LLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPD 198

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T  S+ +A G    +     IH  +++        L  S I  Y+KC  L SA   + 
Sbjct: 199 LFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYK 258

Query: 256 KIEKRCTTSWTAMISCYNR-SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +  +   S TA+++ Y R S +  KAL+ F ++ ++  + + + L ++   CA +  L 
Sbjct: 259 SMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLS 318

Query: 315 EGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            G+ +H   ++    P YD  +G ALI+ YA+ G++ +  +  + + E+N++SW  LI+ 
Sbjct: 319 VGRQIHALALK--CKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITG 376

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK----ID 429
           Y   G   EA+ L  +M+  GL P+  +  S L AC + G    G +   ++I     + 
Sbjct: 377 YGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILP 436

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGN----SLEAI 484
             + F  S ++D++++ G    AY L  ++  K +  +W +++   Y  GN       AI
Sbjct: 437 RAEHF--SCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEEAAI 494

Query: 485 NLF 487
           +LF
Sbjct: 495 HLF 497



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 158/564 (28%), Positives = 272/564 (48%), Gaps = 49/564 (8%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           L+ C        G  +H +I+  GF  +  + T ++  Y + G    ARKVFD+M  R V
Sbjct: 4   LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           VSWS+ I+ Y  N    + L +F  M+R G + +  T  S+  AC  L  L+    I G 
Sbjct: 64  VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
           + + +   +  + ++ + ++SKCG +  A   F  +E+R   SW A+I  Y   G+   +
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
              F  M++    P+L T  +VL +      +     +H  II+ G G      G +LI+
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSG-SLID 242

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYAR-KGMSKEALELLVQMQTWGLMPDSF 400
            YA+C  ++    +  ++  ++++S   L++ YAR    S +AL+L  ++Q   +  D  
Sbjct: 243 AYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDV 302

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCK---DEFVQSSLIDMYSKCGFKNLAYLLFE 457
            + S  + C N+ SL +G QIH   +K  CK   D  + ++LIDMY+K G    A   F 
Sbjct: 303 ILCSMFNICANISSLSVGRQIHALALK--CKPTYDVAMGNALIDMYAKSGEIKDANRAFN 360

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +++K+V+ W S+I G+  +G+  EAI LF +M    L+ +++TFL+ + AC++ G   +
Sbjct: 361 EMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGE 420

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G W                     +M +K   L  A+             +S M+D +  
Sbjct: 421 G-W-----------------ECFNNMISKYNILPRAEH------------FSCMVDLFAR 450

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV---EEGKFYFNAMRIFGVEPD 634
            G L +A +L  +M    IKPN   +  IL AC   G++   EE      A+ +F ++P+
Sbjct: 451 GGLLEEAYNLINKM---NIKPNASLWGAILGACYIYGNMPLAEEA-----AIHLFKMDPE 502

Query: 635 LQ-HYACMVDLLSRSGDIEGAFKM 657
              +Y  + D+ + +G  + A+KM
Sbjct: 503 NSVNYVVLADIYAAAGSWDNAWKM 526



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 154/358 (43%), Gaps = 36/358 (10%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           +++ ++ ++H  ++  G       S  LI++YA+  SL S+  ++ +    D      L+
Sbjct: 213 SDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALM 272

Query: 68  KCYMWN-NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
             Y  + N+  +++ L+ ++ +    I + I  S+   C+++  L  G ++H   +KC  
Sbjct: 273 TGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKP 332

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             D  +  +++  Y + G + DA + F++M  ++V+SW+S+I  Y  +    E + +F  
Sbjct: 333 TYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKK 392

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M  EG++P+ +T LSL  AC   C L                  G     F  M SK   
Sbjct: 393 MEYEGLKPNDITFLSLLFACNH-CGL-----------------TGEGWECFNNMISKYNI 434

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  AE             ++ M+  + R G  ++A     KM     +PN      +LG+
Sbjct: 435 LPRAEH------------FSCMVDLFARGGLLEEAYNLINKM---NIKPNASLWGAILGA 479

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
           C   G +   +     + +  M PE       L + YA  G      K+   + ERN+
Sbjct: 480 CYIYGNMPLAEEAAIHLFK--MDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNL 535



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 82/152 (53%)

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           + ++Q C      + G  +H+++++ G   +I++ T L   Y+K GD  +A++VFD M E
Sbjct: 1   MKSLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPE 60

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
           R VVSWSA I  Y  +G   DA  +F  ML +G K N+ T+ ++L AC+    ++ G   
Sbjct: 61  RTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQI 120

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
              +       +L   + ++DL S+ G +E A
Sbjct: 121 QGCLEKSRFASNLIVQSALLDLHSKCGKMEDA 152



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 13/179 (7%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F  C N+  L+   ++HA  L     YD      LI+ YA+ G ++ +   F+  +E +
Sbjct: 307 MFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKN 366

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  Y  +    E+I L+ KM  E    ++  + S+L AC+  G  G G +   
Sbjct: 367 VISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFN 426

Query: 120 RIIKCGFDKDDVIQTS-----ILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIASYF 172
            +I     K +++  +     ++  +   G L++A  + +KM  +   S W +I+ + +
Sbjct: 427 NMI----SKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACY 481


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/620 (30%), Positives = 320/620 (51%), Gaps = 11/620 (1%)

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           ++ ++L  Y   G    AR++ D+M  R+ VS++ +I +Y         L+      R G
Sbjct: 45  LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V+ D  +  +   AC     LR  R++H   +   +     + NS + MYSKCG++  A 
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           R F   E+R   SW +++S Y R+G  ++ +  F  M       N   L +V+  C+G G
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224

Query: 312 --WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
              +   ++VH  +I+ G+  +  +L  A+I+ YA+ G + E   +  ++ E N++ +N 
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDV-FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 370 LISEYAR------KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           +I+ + R      K ++ EAL L  ++Q+ G+ P  F+ +S L AC   G L+ G QIHG
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            VIK   + D+F+ S+LID+Y   G     +  F    +  +V W +M+ G  QN    +
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK 403

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A++LFH+     L+ D  T  + + AC+++     G+ +       G  +   +  +   
Sbjct: 404 ALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVH 463

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MYA+ GD+  A R F  M   +VVSWSA+I C+  HG   DA   F +M+D+ + PNE+T
Sbjct: 464 MYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEIT 523

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+ +L ACSH G V+EG  Y+  M + +G+ P ++H  C+VDLL R+G +  A   I + 
Sbjct: 524 FLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNG 583

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
            F A+  IW +LL  CRIH+ ++  + +   +       +  Y +L N+Y + G      
Sbjct: 584 IFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLAS 643

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           K R +M+  G+KK PG S I
Sbjct: 644 KTRDLMKQRGVKKEPGLSWI 663



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 158/624 (25%), Positives = 298/624 (47%), Gaps = 24/624 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPAS----TRLIESYAEMGSLRSSRLVFDTFK 56
           + L R+CT+LR    +HAH+        P AS      L+ +Y  +G    +R + D   
Sbjct: 15  LHLLRACTSLRHAAAVHAHIARA----HPAASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             ++  + +LI  Y        S+    +  R    +  F Y + L ACS  G L +G  
Sbjct: 71  RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VH   I  G      +  S++  Y + G + +AR+VFD    RD VSW+S+++ Y     
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL--CSLRPARSIHGHVLRRKIKIDGPLG 234
             E +++F  M R G+  +   + S+ + C      ++  A ++HG V++  +  D  L 
Sbjct: 191 REEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLV 250

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF---QKALESFVKMLEV 291
           ++ I MY+K G L+ A   F  +++     +  MI+ + R+      + A E+     EV
Sbjct: 251 SAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEV 310

Query: 292 KE---EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
           +    +P   T  +VL +C   G+L  GK +H Q+I+     E D++G ALI+ Y   G 
Sbjct: 311 QSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTF-QEDDFIGSALIDLYFNSGC 369

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           M +  +   +  + +I++W  ++S   +  + ++AL L  +    GL PD F+++S ++A
Sbjct: 370 MEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNA 429

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           C ++   + G QI     K    D F  + +S + MY++ G  + A   F+ ++   VV 
Sbjct: 430 CASLAVARAGEQIQCFATK-SGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVS 488

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKL 525
           W+++I    Q+G + +A++ F +M    +  +E+TFL  + ACS+ G +++G ++     
Sbjct: 489 WSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMN 548

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQR-VFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
             YG+   I   T + D+  + G L  A+  + + +   + V W +++    +H  L   
Sbjct: 549 KDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERG 608

Query: 585 ASLFKQMLDSGIKPNEVTFMNILW 608
             +  ++++  ++P       IL+
Sbjct: 609 QLVANRIME--LEPTSSASYVILY 630


>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
 gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
          Length = 602

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 179/535 (33%), Positives = 301/535 (56%), Gaps = 12/535 (2%)

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVM-YSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
           P   IH  ++   +       N  ++  Y++ G + SA   F K+ +R   +W AMI  Y
Sbjct: 22  PVTQIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQRGVDAWNAMIVAY 81

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           +R     + L  + +M+    +P+  T    + + + L  L  G+ +  + +  G G + 
Sbjct: 82  SRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRAVDFGYGCDV 141

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            ++G +++  Y +CGK+ E + V   + +R+++ W  +I+   + G   EA+++  +M+ 
Sbjct: 142 -FVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMRK 200

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKN 450
            G+  D   +   + AC N+G L+LGL +HGH ++ +    D  +Q+SL+DMY+K G   
Sbjct: 201 EGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLE 260

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           LA  +FE++ +K+ V W ++I GF QNG +  A++L  +M     + D    ++A+ ACS
Sbjct: 261 LASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACS 320

Query: 511 NIGQLEKGKWVHHKLISYGVRK---DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
            +G L+ GK +H     Y VR+   ++ + TAL DMYAKCG L  A  +FD +  R+V+ 
Sbjct: 321 QVGHLKLGKSIH----GYIVRRLGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVIL 376

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+ MI  YG+HG   +  SLF +M ++ I P+  TF ++L A SHSG V+ G+++FNAM 
Sbjct: 377 WNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMV 436

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
               + P  +HYACMVDL SR+G +E A+++I SM      +IW ALL+GC  ++ +   
Sbjct: 437 NECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRNLLFG 496

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +   K++     +D G Y L+SN ++    WD    +R IM+ TG+KKVPGYS +
Sbjct: 497 EVAAKKILDLNPDDLGIYALVSNFFSLARMWDRVSILRKIMKETGMKKVPGYSAV 551



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 272/485 (56%), Gaps = 9/485 (1%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           L  +C +   +T++HA ++ TGL + +   +  +I SYA +G + S+R +FD   +    
Sbjct: 13  LLLACKDEAPVTQIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQRGVD 72

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  Y       E + LYH+M+ E     +  +   ++A SSL DL +GE++  R 
Sbjct: 73  AWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRA 132

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           +  G+  D  + +S+L  Y + G +D+A+ VFDKM  RDVV W+++I     N +V E +
Sbjct: 133 VDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAV 192

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVM 240
            MF  M +EG+E D V ML L +AC  L  L+   S+HGH +RR++ +D   L  S + M
Sbjct: 193 DMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDM 252

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+K GDL  A R F ++ ++   SW A+IS + ++G+ + AL+  V+M  ++ +P+   L
Sbjct: 253 YAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVL 312

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++ L +C+ +G L+ GKS+H  I+R+ +G E   LG ALI+ YA+CG +S    +   + 
Sbjct: 313 VSALLACSQVGHLKLGKSIHGYIVRR-LGFEL-VLGTALIDMYAKCGSLSCAHAIFDRVD 370

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R+++ WN +I+ Y   G  KE L L ++M+   + PD  + AS LSA  + G + +G Q
Sbjct: 371 SRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVG-Q 429

Query: 421 IHGHVIKIDCK---DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQ 476
              + +  +CK    E   + ++D++S+ G    AY L E +  +  + +W +++ G + 
Sbjct: 430 YWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHN 489

Query: 477 NGNSL 481
             N L
Sbjct: 490 YRNLL 494



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 255/475 (53%), Gaps = 6/475 (1%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           +L AC    D     ++H  II  G F  +      ++ +Y   G +  AR +FDK+  R
Sbjct: 13  LLLACK---DEAPVTQIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQR 69

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
            V +W+++I +Y     ++E L ++H MV EG +PD  T     +A   L  L     I 
Sbjct: 70  GVDAWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIW 129

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              +      D  +G+S + +Y KCG +  A+  F K+ KR    W  MI+   ++G   
Sbjct: 130 RRAVDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVL 189

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +A++ F +M +   E + + ++ ++ +CA LG L+ G SVH   +R+ M  +   L  +L
Sbjct: 190 EAVDMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSL 249

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           ++ YA+ G +    +V   +  +N +SW  LIS +A+ G ++ AL+LLV+MQ+    PD+
Sbjct: 250 VDMYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDT 309

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI 459
             + S+L AC  VG L+LG  IHG++++    +  + ++LIDMY+KCG  + A+ +F+R+
Sbjct: 310 AVLVSALLACSQVGHLKLGKSIHGYIVRRLGFELVLGTALIDMYAKCGSLSCAHAIFDRV 369

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
             + V++WN+MI  +  +G+  E ++LF +M    +  D  TF + + A S+ GQ++ G+
Sbjct: 370 DSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQ 429

Query: 520 -WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMI 572
            W +  +    +         + D++++ G ++ A ++ +SM +E  +  W A++
Sbjct: 430 YWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALL 484


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 324/607 (53%), Gaps = 42/607 (6%)

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           ++ S      + E L +   MV  G+ P   T  SL + C    SL  A+ +H H+++ +
Sbjct: 35  LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94

Query: 227 IKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
            +  D  LGN  + +Y K G L+ A R F ++  +   SWTAMI+ Y R    Q+AL  F
Sbjct: 95  FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            +M +V  +PN  T  ++L +C  L  L E    H +I++ G      ++G  L++ YA+
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIVKGGFESNV-FVGNGLVDMYAK 210

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-----TWGLMPDSF 400
            G +    ++   + +R+++SWN +I+ Y + G+ ++AL+L  ++      TW  M    
Sbjct: 211 RGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTM---- 266

Query: 401 SVASSLSACGNV-GSLQL------------GLQIHGHVIKIDCKDEFVQ----------- 436
              +  + CG+V  +++L               I G+V     K+ F             
Sbjct: 267 --MAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVIS 324

Query: 437 -SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            +++I  +++ G    A  LF+ + + +VV WN+MI G+ QNG +  A+ LF QM +  +
Sbjct: 325 WNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDM 384

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + +  TF   + AC+ +  LE+G   H  +I  G + D+ +   L  MYAKCG ++ A++
Sbjct: 385 KPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARK 444

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VFD M +++  S SAMI  Y ++G   ++  LF+QM  +G+KP+ VTF+ +L AC H+G 
Sbjct: 445 VFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGL 504

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V+EG+ YF+ M R + + P ++HY CM+DLL R+G  + A  +I+ MP   +  +WG+LL
Sbjct: 505 VDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLL 564

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           + CR H  ID+ + + + L      +   Y LLSNIYA  G WD+ G VR+ M+   +KK
Sbjct: 565 SACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKK 624

Query: 735 VPGYSTI 741
             G S I
Sbjct: 625 KLGCSWI 631



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 221/446 (49%), Gaps = 33/446 (7%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLH-YDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L + C N + L     LHAH++ T     D     +L+  Y ++GSL  +R VFD     
Sbjct: 70  LLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK 129

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   W  +I  Y  +   +E++  +++M       ++F + S+L AC+ L  LG   + H
Sbjct: 130 NVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFH 186

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I+K GF+ +  +   ++  Y + GC++ AR++FDKM  RDVVSW+++IA Y  N  + 
Sbjct: 187 DEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIE 246

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACG------ELCSLRPARS-------IHGHVLRR 225
           + LK+F  + +  V   + TM++    CG      EL    P ++       I G+V   
Sbjct: 247 DALKLFQEIPKRDV-ITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNG 305

Query: 226 KIKIDGPL-----------GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            +K    L            N+ I  +++ G +  A + F  + +    SW AMI+ Y++
Sbjct: 306 SVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQ 365

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G  + AL+ F +M  V  +PN  T   VL +CA L  L +G   H  +IR G   +   
Sbjct: 366 NGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDV-L 424

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G  L+  YA+CG + +  KV   + +++  S + +I  YA  G SKE+LEL  QMQ  G
Sbjct: 425 VGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTG 484

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQ 420
           L PD  +    LSAC + G +  G Q
Sbjct: 485 LKPDRVTFVGVLSACCHAGLVDEGRQ 510



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 210/472 (44%), Gaps = 65/472 (13%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +  +CT+L  L   H  ++  G   +      L++ YA+ G +  +R +FD   + D   
Sbjct: 172 ILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVS 231

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI- 121
           W  +I  Y+ N   E+++ L+ ++ +      N    +++   +  GD+ +  ++  ++ 
Sbjct: 232 WNAMIAGYVQNGLIEDALKLFQEIPKRDVITWN----TMMAGYAQCGDVENAVELFEKMP 287

Query: 122 -------------------IKCGF-------DKDDVIQTSILCTYGEFGCLDDARKVFDK 155
                              +K  F       +++ +   +++  + + G +++A K+F  
Sbjct: 288 EQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKT 347

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M   +VVSW+++IA Y  N      LK+F  M    ++P+  T   +  AC  L  L   
Sbjct: 348 MPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQG 407

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
              H  V+R   + D  +GN+ + MY+KCG +  A + F ++ ++ + S +AMI  Y  +
Sbjct: 408 NEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAIN 467

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  +++LE F +M     +P+ +T + VL +C   G + EG+     + R      + ++
Sbjct: 468 GCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTR------FYHI 521

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            PA+ E Y  C                       +I    R G   EA +L+ +M    +
Sbjct: 522 TPAM-EHYG-C-----------------------MIDLLGRAGCFDEANDLINKMP---I 553

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            PD+    S LSAC    ++ LG ++  H+I ++ ++      L ++Y+  G
Sbjct: 554 KPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAG 605



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 9/234 (3%)

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           + ++    + G   EA+++   M  N +     T+ + +Q C N   L   K +H  +I 
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 528 YGVR-KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
                +DI +   L  +Y K G L  A+RVFD M  +NVVSW+AMI  Y  H    +A  
Sbjct: 93  TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
            F +M D GI+PN  TF +IL AC+    +  G+F+   ++  G E ++     +VD+ +
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLEVL--GEFHDEIVK-GGFESNVFVGNGLVDMYA 209

Query: 647 RSGDIEGAFKMIHSMP----FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           + G IE A ++   MP       N  I G + NG  I   + + + I K   +T
Sbjct: 210 KRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGL-IEDALKLFQEIPKRDVIT 262



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 11/245 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P   +   L +    H  ++ +G   D      L+  YA+ GS+  +R VFD  ++ DS
Sbjct: 395 LPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDS 454

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
              + +I  Y  N   +ES+ L+ +M           +  VL AC   G +  G + +  
Sbjct: 455 ASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQ-YFD 513

Query: 121 IIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS--YFDNA 175
           I+   +     ++    ++   G  GC D+A  + +KM  + D   W S++++    +N 
Sbjct: 514 IMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNI 573

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D+ E +      +       +V + ++  A G    +    S+   +  RK+K    LG 
Sbjct: 574 DLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDI---GSVRNRMKDRKVK--KKLGC 628

Query: 236 SFIVM 240
           S+IV+
Sbjct: 629 SWIVI 633


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 234/798 (29%), Positives = 383/798 (47%), Gaps = 103/798 (12%)

Query: 18  AHLLVTGLH--YDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           A L V  +H   D  A +  I   A +G LR +R VFD     D   W  +I  Y  +  
Sbjct: 20  APLPVRSVHRALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGM 79

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E++ +L+  +       +  +    L   + LG +    +V   +     +++ V   +
Sbjct: 80  LEDARILFDAISGGNVRTATIL----LSGYARLGRVLDARRVFDGMP----ERNTVAWNA 131

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV------------------ 177
           ++  Y + G +  AR++FD M SRDV SW+S++  Y  +  +                  
Sbjct: 132 MVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTW 191

Query: 178 -------------SEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGH 221
                         +G  +F  M  EG  PD   F ++LS      +L  L   R +   
Sbjct: 192 TVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPL--- 248

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLS-AERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
           VL+   + D  +G S + +Y++    L  A + F  + +R   +W+ MI+  +  G    
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           A+  + +   VK  P+   L+T L  C        G+    +I+ + +         A+I
Sbjct: 309 AIAVYGRD-PVKSIPSQTALLTGLARC--------GRITEARILFEQIPDPIVVSWNAMI 359

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             Y + G + E +++   +  RN +SW  +I+ YA+ G S+EAL+LL  +   G++P   
Sbjct: 360 TGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLS 419

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYL--LFE 457
           S+ SS  AC ++G+L+ G Q+H   +K  C+ + +V ++LI MY KC  +N+ Y+  +F 
Sbjct: 420 SLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKC--RNMEYVRQVFN 477

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA--------- 508
           R++ K  V WNS I    QN    +A ++F  M    L  D V++ T I A         
Sbjct: 478 RMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERGDE 533

Query: 509 --------------------------CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
                                     C  +G  + G+ +H   I +G+  ++ +  AL  
Sbjct: 534 AVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMS 593

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY KCG    + +VFDSM ER++ +W+  I     HG   +A  +++ M   G+ PNEVT
Sbjct: 594 MYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVT 652

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+ +L ACSH+G V+EG  +F +M R +G+ P L+HYACMVDLL R+GD++GA K I+ M
Sbjct: 653 FVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDM 712

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   +  IW ALL  C+IHK  ++ +   ++L  T  ++ G Y +LSNIY+  G W E  
Sbjct: 713 PIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVA 772

Query: 722 KVRSIMEVTGLKKVPGYS 739
           ++R IM+  G+ K PG S
Sbjct: 773 ELRKIMKQRGVSKEPGCS 790


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 229/759 (30%), Positives = 382/759 (50%), Gaps = 21/759 (2%)

Query: 1   MPLFRSCTNLRKLTRL---HAHLLVTGLHY--DPPASTRLIESYAE-MGSLRSSRLVFDT 54
           + + R+C  +  +  L     H L+  L Y  D   S  LI  Y + +GS+  +   F  
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165

Query: 55  FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG--DLG 112
            +  +S  W  +I  Y        +  ++  M  + +  + + + S++    SL   D+ 
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVR 225

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
             E++   I K G   D  + + ++  + + G L  ARKVF++M +R+ V+ + ++    
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285

Query: 173 DNADVSEGLKMF---HSMVREGVEPDFVTMLSLAE-ACGELCSLRPARSIHGHVLRRK-I 227
                 E  K+F   +SM+    E   + + S  E +  E   L+  R +HGHV+    +
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
                +GN  + MY+KCG +  A R F  +  + + SW +MI+  +++G F +A+E +  
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M      P   TLI+ L SCA L W + G+ +H + ++ G+      +  AL+  YAE G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS-VSNALMTLYAETG 464

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMS-KEALELLVQMQTWGLMPDSFSVASSL 406
            ++EC K+  ++ E + +SWN +I   AR   S  EA+   +  Q  G   +  + +S L
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERI-QQKSV 464
           SA  ++   +LG QIHG  +K +  DE   +++LI  Y KCG  +    +F R+ +++  
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V WNSMI G+  N    +A++L   M      +D   + T + A +++  LE+G  VH  
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 644

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
            +   +  D+ + +AL DMY+KCG L  A R F++M  RN  SW++MI  Y  HGQ  +A
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704

Query: 585 ASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMV 642
             LF+ M LD    P+ VTF+ +L ACSH+G +EEG  +F +M   +G+ P ++H++CM 
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764

Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHKRIDVMKTIEKELSVTGTNDN 701
           D+L R+G+++     I  MP   N  IW  +L   CR + R   +     E+      +N
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824

Query: 702 GY-YTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
              Y LL N+YA  G W++  K R  M+   +KK  GYS
Sbjct: 825 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 181/693 (26%), Positives = 335/693 (48%), Gaps = 14/693 (2%)

Query: 1   MPLFRSCTNLRKLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +   +SC   R   R  H+ L    L  D      LI +Y E G   S+R VFD     +
Sbjct: 7   LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS--GEKV 117
              WA ++  Y  N   +E+++    M++E    + + + SVLRAC  +G +G   G ++
Sbjct: 67  CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           HG + K  +  D V+   ++  Y +  G +  A   F  +  ++ VSW+SII+ Y    D
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC--SLRPARSIHGHVLRRKIKIDGPLG 234
                ++F SM  +G  P   T  SL      L    +R    I   + +  +  D  +G
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV---KMLEV 291
           +  +  ++K G L  A + F ++E R   +   ++    R  W ++A + F+    M++V
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306

Query: 292 KEEPNLITLITVLG-SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
             E  +I L +    S A    L++G+ VH  +I  G+      +G  L+  YA+CG ++
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +V + + +++ +SWN +I+   + G   EA+E    M+   ++P SF++ SSLS+C 
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426

Query: 411 NVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           ++   +LG QIHG  +K+    +  V ++L+ +Y++ G+ N    +F  + +   V WNS
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486

Query: 470 MICGFYQNGNSL-EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           +I    ++  SL EA+  F        +++ +TF + + A S++   E GK +H   +  
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN 546

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASL 587
            +  +   + AL   Y KCG++   +++F  M+E R+ V+W++MI  Y  +  L  A  L
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
              ML +G + +   +  +L A +   ++E G           +E D+   + +VD+ S+
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            G ++ A +  ++MP   N   W ++++G   H
Sbjct: 667 CGRLDYALRFFNTMPVR-NSYSWNSMISGYARH 698



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 292/597 (48%), Gaps = 17/597 (2%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           ++N +  S +++C  +G  G+    H R+ K   DKD  +  +++  Y E G    ARKV
Sbjct: 1   MTNCVPLSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKV 58

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD+M  R+ VSW+ I++ Y  N +  E L     MV+EG+  +    +S+  AC E+ S+
Sbjct: 59  FDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118

Query: 213 RP--ARSIHGHVLRRKIKIDGPLGNSFIVMYSKC-GDLLSAERTFVKIEKRCTTSWTAMI 269
                R IHG + +    +D  + N  I MY KC G +  A   F  IE + + SW ++I
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSII 178

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW--LREGKSVHCQIIRKG 327
           S Y+++G  + A   F  M      P   T  +++ +   L    +R  + + C I + G
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG 238

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +  +  ++G  L+  +A+ G +S   KV + +  RN ++ N L+    R+   +EA +L 
Sbjct: 239 LLTDL-FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297

Query: 388 VQMQTW-GLMPDSFSVASS----LSACGNVGSLQLGLQIHGHVIKIDCKDEFV--QSSLI 440
           + M +   + P+S+ +  S     S    VG L+ G ++HGHVI     D  V   + L+
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLV 356

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           +MY+KCG    A  +F  +  K  V WNSMI G  QNG  +EA+  +  M  + +     
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T ++++ +C+++   + G+ +H + +  G+  ++ +  AL  +YA+ G L   +++F SM
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476

Query: 561 SERNVVSWSAMIDCYGMHGQ-LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
            E + VSW+++I       + L +A   F     +G K N +TF ++L A S     E G
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           K          +  +      ++    + G+++G  K+   M    +   W ++++G
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593


>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/581 (33%), Positives = 300/581 (51%), Gaps = 37/581 (6%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P   T+  L + C    S++  + +H  ++   +          + +  + GDL  A   
Sbjct: 37  PTHQTLHHLLDQCS---SMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLL 93

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +I +     +  +I  Y+ S    K+L  F +M+     PN  T   VL +CA   + 
Sbjct: 94  FDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFY 153

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            E   VH Q I+ GMGP +  +  A++  Y  C  +    +V   I +R I+SWN +I+ 
Sbjct: 154 WEAVIVHAQAIKLGMGP-HACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAG 212

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           Y++ G   EA+ L  +M   G+  D F++ S LSA     +L LG  +H +++    + D
Sbjct: 213 YSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEID 272

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQK------------------------------ 462
             V ++LIDMY+KCG    A  +F+++  K                              
Sbjct: 273 SIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPV 332

Query: 463 -SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
            +VV WNS+IC   Q G   EA+ LFH+M ++ +  D+ T ++ +  CSN G L  GK  
Sbjct: 333 KNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQA 392

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  +    +   + +  +L DMYAKCG LQTA  +F  M E+NVVSW+ +I    +HG  
Sbjct: 393 HCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFG 452

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYAC 640
            +A  +FK M  SG+ P+E+TF  +L ACSHSG V+ G++YF+ M   F + P ++HYAC
Sbjct: 453 EEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYAC 512

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDLL R G +  A  +I  MP   +  +WGALL  CRI+  +++ K I K+L   G  +
Sbjct: 513 MVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFN 572

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +G Y LLSN+Y+E   WD+  K+R IM+ +G+KK    S I
Sbjct: 573 SGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFI 613



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 252/512 (49%), Gaps = 39/512 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L   C+++++L  +HA +++ GL        +L+    + G LR + L+FD   +P+ FM
Sbjct: 45  LLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFM 104

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           +  LI+ Y  +N   +S+LL+ +M+      + F +P VL+AC++         VH + I
Sbjct: 105 YNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAI 164

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G      +Q +IL  Y     +  AR+VFD ++ R +VSW+S+IA Y       E + 
Sbjct: 165 KLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAIL 224

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M++ GVE D  T++SL  A  + C+L   R +H +++   ++ID  + N+ I MY+
Sbjct: 225 LFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYA 284

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG-------------------W------ 277
           KCG L  A+  F ++  +   SWT+M++ Y   G                   W      
Sbjct: 285 KCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICC 344

Query: 278 ------FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
                 + +A+E F +M      P+  TL+++L  C+  G L  GK  HC I    +   
Sbjct: 345 LVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVS 404

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              L  +LI+ YA+CG +     +   + E+N++SWN++I   A  G  +EA+E+   MQ
Sbjct: 405 VT-LCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQ 463

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
             GL PD  +    LSAC + G + +G     I     +I    E   + ++D+  + GF
Sbjct: 464 ASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHY-ACMVDLLGRGGF 522

Query: 449 KNLAYLLFERIQQK-SVVMWNSMI--CGFYQN 477
              A  L +++  K  VV+W +++  C  Y N
Sbjct: 523 LGEAMTLIQKMPVKPDVVVWGALLGACRIYGN 554



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 207/449 (46%), Gaps = 51/449 (11%)

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
           + P   TL  +L  C+ +  L   K VH QII  G+  +   LG  L+    + G +   
Sbjct: 35  KSPTHQTLHHLLDQCSSMKRL---KLVHAQIILHGLAAQVVTLGK-LLSLCVQEGDLRYA 90

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             +   I + N   +N LI  Y+      ++L L  QM + G MP+ F+    L AC   
Sbjct: 91  HLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAK 150

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
                 + +H   IK+       VQ++++  Y  C     A  +F+ I  +++V WNSMI
Sbjct: 151 PFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMI 210

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G+ + G   EAI LF +M    +E D  T ++ + A S    L+ G++VH  ++  GV 
Sbjct: 211 AGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVE 270

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG--------------- 576
            D  +  AL DMYAKCG LQ A+ VFD M +++VVSW++M++ Y                
Sbjct: 271 IDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHM 330

Query: 577 ----------------MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
                             GQ  +A  LF +M  SG+ P++ T ++IL  CS++G +  GK
Sbjct: 331 PVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGK 390

Query: 621 --FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
               +    I  V   L +   ++D+ ++ G ++ A  +   MP   N   W  ++    
Sbjct: 391 QAHCYICDNIITVSVTLCN--SLIDMYAKCGALQTAIDIFFGMP-EKNVVSWNVIIGALA 447

Query: 679 IH----KRIDVMKTIEK------ELSVTG 697
           +H    + I++ K+++       E++ TG
Sbjct: 448 LHGFGEEAIEMFKSMQASGLYPDEITFTG 476


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 338/650 (52%), Gaps = 10/650 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + S+L    S  D     ++H  ++  G     V+   ++  Y + G +  A +VFD M 
Sbjct: 51  HASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMP 110

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPAR 216
            R+  +W+++I    D    SE L+MF  MV +G V  D  T   + +AC  L ++   R
Sbjct: 111 RRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGR 170

Query: 217 SIHGHVLRRKIKIDGPLGNSFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
            +   ++   I       N F+      M++KCG L  A   F  ++ R   +WTAMI  
Sbjct: 171 KV-WEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGG 229

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
              SG + + ++ F  M       + +   TV+ +C   G L+ G ++H   ++ G   +
Sbjct: 230 TVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGD 289

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             Y+  AL++ Y +CG +   + +  +   ++++SW+ LI  Y++ GM   ++ L  +M 
Sbjct: 290 I-YVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMI 348

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKN 450
           + G+ P+S ++AS L     +  ++ G +IH   I+    + EFV S+LID+YSK G   
Sbjct: 349 SLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIR 408

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           +A  +F     K + +WNSM+ G+  NG S  A      +    L+ D VT ++ +  C+
Sbjct: 409 VAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCN 468

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
               L +GK +H  +I Y +     ++ AL DMY KCG L+ A+ VF  M+ERN V+++ 
Sbjct: 469 QHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNI 528

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIF 629
           +I  +G H   + A S F  M   GI P++VTF+ +L  CSH+G +++G   Y + +  +
Sbjct: 529 LISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDY 588

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            + P+ +HY+C+VDL SR G ++ A+  + +M       + G LL  CR+H R+D+ + +
Sbjct: 589 NISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELV 648

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            K +     ND GY+ LLSNIYA+ G W +  ++R++++   LKK  G S
Sbjct: 649 GKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 698



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/613 (27%), Positives = 321/613 (52%), Gaps = 13/613 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            +SC + ++  RLHA +LV G  +      +L+ +YA++G +  +  VFD     +SF W
Sbjct: 58  LQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAW 117

Query: 64  AVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEKVHGRI- 121
             +IK  +    F E++ ++  M+ +    +  F YP V++AC++LG +  G KV   + 
Sbjct: 118 NAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVE 177

Query: 122 --IKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I  G  + +V +Q +++  + + GCLD+AR VF+ M  RD+ +W+++I     + +  
Sbjct: 178 ADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWL 237

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E + +F+ M  EG   D +   ++  ACG    L+   ++HG  ++     D  + N+ +
Sbjct: 238 EVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALV 297

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG +  A+  F     +   SW+++I  Y+++G    ++  F +M+ +   PN  
Sbjct: 298 DMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSS 357

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL ++L   + L  +R GK +HC  IR G+    +++  ALI+ Y++ G +   E +   
Sbjct: 358 TLASILPCLSVLKLIRSGKEIHCFSIRHGL-ERSEFVVSALIDLYSKQGLIRVAETIFWL 416

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             ++++  WN +++ YA  G S  A   L  +Q  GL PD  +V S L  C     L  G
Sbjct: 417 TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQG 476

Query: 419 LQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            ++H +VIK  C +    V ++L+DMY KCGF  +A  +F+ + +++ V +N +I  F +
Sbjct: 477 KELHAYVIKY-CINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK 535

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIY 535
           + +  +A++ F  M  + +  D+VTF+  +  CS+ G ++KG  ++H ++  Y +  +  
Sbjct: 536 HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE 595

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDS 594
             + + D+Y++CG L  A     +M+E   +     ++    +H +++ A  + K++ + 
Sbjct: 596 HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ 655

Query: 595 GIKPNEVTFMNIL 607
              PN+  +  +L
Sbjct: 656 --NPNDPGYHILL 666


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 197/654 (30%), Positives = 339/654 (51%), Gaps = 18/654 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + S+L    S  D     ++H  ++  G     V+   ++  Y + G +  A +VFD M 
Sbjct: 56  HASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMP 115

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPAR 216
            R+  +W+++I    D    SE L+MF  MV +G V  D  T   + +AC  L ++   R
Sbjct: 116 RRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGR 175

Query: 217 SIHGHVLRRKIKIDGPLGNS---------FIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            +        ++ D   GN+          + M++KCG L  A   F  ++ R   +WTA
Sbjct: 176 KV-----WEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTA 230

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI     SG + + ++ F  M       + +   TV+ +C   G L+ G ++H   ++ G
Sbjct: 231 MIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSG 290

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
              +  Y+  AL++ Y +CG +   + +  +   ++++SW+ LI  Y++ GM   ++ L 
Sbjct: 291 ASGDI-YVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLF 349

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKC 446
            +M + G+ P+S ++AS L     +  ++ G +IH   I+    + EFV S+LID+YSK 
Sbjct: 350 CEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQ 409

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G   +A  +F     K + +WNSM+ G+  NG S  A      +    L+ D VT ++ +
Sbjct: 410 GLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVL 469

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
             C+    L +GK +H  +I Y +     ++ AL DMY KCG L+ A+ VF  M+ERN V
Sbjct: 470 PLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTV 529

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNA 625
           +++ +I  +G H   + A S F  M   GI P++VTF+ +L  CSH+G +++G   Y + 
Sbjct: 530 TYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSM 589

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
           +  + + P+ +HY+C+VDL SR G ++ A+  + +M       + G LL  CR+H R+D+
Sbjct: 590 LHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDI 649

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            + + K +     ND GY+ LLSNIYA+ G W +  ++R++++   LKK  G S
Sbjct: 650 AELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 703



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/613 (27%), Positives = 321/613 (52%), Gaps = 13/613 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            +SC + ++  RLHA +LV G  +      +L+ +YA++G +  +  VFD     +SF W
Sbjct: 63  LQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAW 122

Query: 64  AVLIKCYMWNNFFEESILLYHKMIRE-QATISNFIYPSVLRACSSLGDLGSGEKVHGRI- 121
             +IK  +    F E++ ++  M+ +    +  F YP V++AC++LG +  G KV   + 
Sbjct: 123 NAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVE 182

Query: 122 --IKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I  G  + +V +Q +++  + + GCLD+AR VF+ M  RD+ +W+++I     + +  
Sbjct: 183 TDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWL 242

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E + +F+ M  EG   D +   ++  ACG    L+   ++HG  ++     D  + N+ +
Sbjct: 243 EVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALV 302

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG +  A+  F     +   SW+++I  Y+++G    ++  F +M+ +   PN  
Sbjct: 303 DMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSS 362

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL ++L   + L  +R GK +HC  IR G+    +++  ALI+ Y++ G +   E +   
Sbjct: 363 TLASILPCLSVLKLIRSGKEIHCFSIRHGL-ERSEFVVSALIDLYSKQGLIRVAETIFWL 421

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
             ++++  WN +++ YA  G S  A   L  +Q  GL PD  +V S L  C     L  G
Sbjct: 422 TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQG 481

Query: 419 LQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            ++H +VIK  C +    V ++L+DMY KCGF  +A  +F+ + +++ V +N +I  F +
Sbjct: 482 KELHAYVIKY-CINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK 540

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIY 535
           + +  +A++ F  M  + +  D+VTF+  +  CS+ G ++KG  ++H ++  Y +  +  
Sbjct: 541 HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE 600

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDS 594
             + + D+Y++CG L  A     +M+E   +     ++    +H +++ A  + K++ + 
Sbjct: 601 HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ 660

Query: 595 GIKPNEVTFMNIL 607
              PN+  +  +L
Sbjct: 661 --NPNDPGYHILL 671


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 206/686 (30%), Positives = 345/686 (50%), Gaps = 37/686 (5%)

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF--DKDDVIQTSILCTYGEFGCLDDA 149
           T+  F  P   ++ ++L  L +   +HG  ++          +  ++L  Y   G L  A
Sbjct: 54  TLDRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAA 113

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
             +FD M SRD V+++S+IA+          L     M+ EG      T++S+  AC  L
Sbjct: 114 LALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHL 173

Query: 210 C-SLRPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTF-----VKIEKR 260
              LR  R  H   L+    +DG      N+ + MY++ G +  A+  F       +   
Sbjct: 174 AEDLRLGREAHAFALKNGF-LDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGG 232

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
              +W  M+S   +SG   +A+E    M+     P+ +T  + L +C+ L  L  G+ +H
Sbjct: 233 GVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMH 292

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKG 378
             +++        ++  AL++ YA   ++     V   +  GER +  WN +I  YA+ G
Sbjct: 293 AYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAG 352

Query: 379 MSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQ 436
           + ++ALEL  +M+T  G++P   ++A  L +C    +      +HG+V+K    D  FVQ
Sbjct: 353 LDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQ 412

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM-----Y 491
           ++L+D+Y++ G  + A  +F  I+ + VV WN++I G    G+  +A  L  +M     +
Sbjct: 413 NALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRF 472

Query: 492 LNCLEMD-------------EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
            +    D              +T +T +  C+ +    +GK +H   + + +  D+ + +
Sbjct: 473 TDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGS 532

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IK 597
           AL DMYAKCG L  ++ VFD +  RNV++W+ +I  YGMHG  ++A +LF +M+ S   K
Sbjct: 533 ALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAK 592

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PNEVTF+  L ACSHSG V+ G   F +M R  GVEP    +AC VD+L R+G ++ A++
Sbjct: 593 PNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYR 652

Query: 657 MIHSM-PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
           +I SM P     S W + L  CR+H+ + + +   + L     ++  +Y LL NIY+  G
Sbjct: 653 IISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSAAG 712

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
            W++  +VRS M   G+ K PG S I
Sbjct: 713 LWEKSSEVRSRMRQRGVSKEPGCSWI 738



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 173/620 (27%), Positives = 305/620 (49%), Gaps = 47/620 (7%)

Query: 2   PLFRSCTNLRKLTRLHA-------HLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT 54
           P  +S   LR LT + +       H L+ G    P  S  L+ +YA  G L ++  +FD 
Sbjct: 62  PAAKSAAALRSLTAVRSIHGAALRHDLLDG--PTPAVSNALLTAYARCGDLTAALALFDA 119

Query: 55  FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGS 113
               D+  +  LI        +  ++     M+ E   +++F   SVL ACS L  DL  
Sbjct: 120 MPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRL 179

Query: 114 GEKVHGRIIKCGF-DKDDVIQ-TSILCTYGEFGCLDDARKVFDKMTSRD-----VVSWSS 166
           G + H   +K GF D D+     ++L  Y   G +DDA+ +F  + + D     VV+W++
Sbjct: 180 GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNT 239

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR-R 225
           +++    +    E +++ + MV  GV PD VT  S   AC +L  L   R +H +VL+  
Sbjct: 240 MVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDA 299

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALE 283
            +  +  + ++ + MY+    + +A   F  V   +R    W AMI  Y ++G  + ALE
Sbjct: 300 DLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALE 359

Query: 284 SFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
            F +M  E    P+  T+  VL SCA        ++VH  ++++GM  +  ++  AL++ 
Sbjct: 360 LFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMA-DNPFVQNALMDL 418

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-------- 394
           YA  G M     +   I  R+++SWN LI+    +G  ++A +L+ +MQ  G        
Sbjct: 419 YARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATE 478

Query: 395 ----------LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDM 442
                     ++P++ ++ + L  C  + +   G +IHG+ ++  +D  D  V S+L+DM
Sbjct: 479 DGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALD-SDVAVGSALVDM 537

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLEMDEVT 501
           Y+KCG   L+  +F+R+ +++V+ WN +I  +  +G   EAI LF +M   +  + +EVT
Sbjct: 538 YAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVT 597

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           F+ A+ ACS+ G +++G  +   +  ++GV     +     D+  + G L  A R+  SM
Sbjct: 598 FIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSM 657

Query: 561 --SERNVVSWSAMIDCYGMH 578
              E+ V +WS+ +    +H
Sbjct: 658 EPGEQQVSAWSSFLGACRLH 677


>gi|218191332|gb|EEC73759.1| hypothetical protein OsI_08419 [Oryza sativa Indica Group]
          Length = 725

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 205/654 (31%), Positives = 346/654 (52%), Gaps = 11/654 (1%)

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y    + EE I+LY ++   Q  +       VL++C+ L +L  G+ +H   +K G   D
Sbjct: 4   YFRAGYPEEVIILYKRLKLHQIGLDGKTITFVLKSCTELENLYLGKGMHVDSLKFGLSGD 63

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS--EGLKMFHSM 187
             + +S++    +   +D ++ VF ++  +DVV+++S+I  Y +  D        +   M
Sbjct: 64  KFVGSSLIVLSSKLHRMDGSQGVFKEIIDKDVVAYTSMITGYSEIVDSVAWNAFDIAIDM 123

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMYSKCGD 246
           ++  +E + VTM+SL +  G L +L+  +S+H + +RR I + D  L    + +Y++CG 
Sbjct: 124 LQGNLEVNRVTMISLLQIAGNLGALKEGKSLHCYSIRRAIVVSDYILETCIVNLYTRCGA 183

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLG 305
             SA  T ++  K    SW AM+S   R+G    A+     ML E K  P+ +T   V+ 
Sbjct: 184 YQSAVAT-LQNSKGTAASWNAMLSGLTRAGQSFDAIHYLSVMLHEHKITPDSVTFANVIS 242

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +C  + +     S+H  +IR+ + P    L  AL++ Y++C K++    + + +  ++ +
Sbjct: 243 ACVEVCYFGYAASIHTYLIRRYI-PLDVVLATALVKVYSKCKKITISRHLFNQLIVKDAV 301

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           S+N ++  Y   GM+ EA  LL  M   G++PD  +V S L+A  +   L  G  IHG  
Sbjct: 302 SYNAMMYGYLHNGMANEATSLLNYMMAEGIVPDFATVLSLLAAFADQRDLVRGRWIHGFA 361

Query: 426 IKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           I+   C D  V++ ++ MYS CG   +A ++F+ ++QKS+V W +M+ G    G+  E +
Sbjct: 362 IRHGFCSDGDVENHILYMYSVCGKPAVARVIFDLLEQKSLVSWTAMMKGCLPYGHGDEVV 421

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LFH M  +  + D ++ +TA+QA S +G L   K +H  +    + KD     +L   Y
Sbjct: 422 QLFHLMQKHGEKPDSMSLVTAVQAVSELGHLNGLKQIHCFVYRSLLEKDKITANSLISAY 481

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           AKCG L  +  +F S+  RN+ +W+A+I  Y MHG   +   +FKQM +  I+P+E+TF 
Sbjct: 482 AKCGRLDLSVGLFFSLEYRNLDTWNAIISAYAMHGFYINMLEMFKQMEEENIQPDELTFS 541

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +L ACSH+G V++G   FN+M  ++ V P  +HY CMVDLL R+G +E  +K I     
Sbjct: 542 TVLTACSHAGLVKDGWRMFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTL 601

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
               +I+  L++ CR H+   +   I KEL   G    G++      Y  E NW
Sbjct: 602 KDKSTIFCVLISACRTHRNTQLALAISKELLEHGPQKPGHHF---ASYLAESNW 652



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 259/539 (48%), Gaps = 22/539 (4%)

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           +  YF      E + ++  +    +  D  T+  + ++C EL +L   + +H   L+  +
Sbjct: 1   MVDYFRAGYPEEVIILYKRLKLHQIGLDGKTITFVLKSCTELENLYLGKGMHVDSLKFGL 60

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY----NRSGWFQKALE 283
             D  +G+S IV+ SK   +  ++  F +I  +   ++T+MI+ Y    +   W   A +
Sbjct: 61  SGDKFVGSSLIVLSSKLHRMDGSQGVFKEIIDKDVVAYTSMITGYSEIVDSVAW--NAFD 118

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
             + ML+   E N +T+I++L     LG L+EGKS+HC  IR+ +      L   ++  Y
Sbjct: 119 IAIDMLQGNLEVNRVTMISLLQIAGNLGALKEGKSLHCYSIRRAIVVSDYILETCIVNLY 178

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL-VQMQTWGLMPDSFSV 402
             CG        +    +    SWN ++S   R G S +A+  L V +    + PDS + 
Sbjct: 179 TRCGAYQSAVATLQN-SKGTAASWNAMLSGLTRAGQSFDAIHYLSVMLHEHKITPDSVTF 237

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           A+ +SAC  V        IH ++I+     D  + ++L+ +YSKC    ++  LF ++  
Sbjct: 238 ANVISACVEVCYFGYAASIHTYLIRRYIPLDVVLATALVKVYSKCKKITISRHLFNQLIV 297

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K  V +N+M+ G+  NG + EA +L + M    +  D  T L+ + A ++   L +G+W+
Sbjct: 298 KDAVSYNAMMYGYLHNGMANEATSLLNYMMAEGIVPDFATVLSLLAAFADQRDLVRGRWI 357

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H   I +G   D  ++  +  MY+ CG    A+ +FD + ++++VSW+AM+     +G  
Sbjct: 358 HGFAIRHGFCSDGDVENHILYMYSVCGKPAVARVIFDLLEQKSLVSWTAMMKGCLPYGHG 417

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK----FYFNAMRIFGVEPDLQH 637
           ++   LF  M   G KP+ ++ +  + A S  G +   K    F + ++    +E D   
Sbjct: 418 DEVVQLFHLMQKHGEKPDSMSLVTAVQAVSELGHLNGLKQIHCFVYRSL----LEKDKIT 473

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KRIDVMKTIEKE 692
              ++   ++ G ++ +  +  S+ +  N   W A+++   +H      +++ K +E+E
Sbjct: 474 ANSLISAYAKCGRLDLSVGLFFSLEYR-NLDTWNAIISAYAMHGFYINMLEMFKQMEEE 531



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 3/209 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +  + R L R   +H   +  G   D      ++  Y+  G    +R++FD  ++
Sbjct: 339 LSLLAAFADQRDLVRGRWIHGFAIRHGFCSDGDVENHILYMYSVCGKPAVARVIFDLLEQ 398

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                W  ++K  +     +E + L+H M +      +    + ++A S LG L   +++
Sbjct: 399 KSLVSWTAMMKGCLPYGHGDEVVQLFHLMQKHGEKPDSMSLVTAVQAVSELGHLNGLKQI 458

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  + +   +KD +   S++  Y + G LD +  +F  +  R++ +W++II++Y  +   
Sbjct: 459 HCFVYRSLLEKDKITANSLISAYAKCGRLDLSVGLFFSLEYRNLDTWNAIISAYAMHGFY 518

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
              L+MF  M  E ++PD +T  ++  AC
Sbjct: 519 INMLEMFKQMEEENIQPDELTFSTVLTAC 547



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L  L ++H  +  + L  D   +  LI +YA+ G L  S  +F + +  +   W  +I 
Sbjct: 451 HLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGRLDLSVGLFFSLEYRNLDTWNAIIS 510

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  + F+   + ++ +M  E        + +VL ACS  G +  G ++   +       
Sbjct: 511 AYAMHGFYINMLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRMFNSMTSV---- 566

Query: 129 DDVIQTSILCTYGEFGCLDD 148
                 S+L     +GC+ D
Sbjct: 567 -----YSVLPQEEHYGCMVD 581


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 213/707 (30%), Positives = 356/707 (50%), Gaps = 16/707 (2%)

Query: 48  SRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI----SNFIYPSVLR 103
           ++ VFD     D   W  L+  Y        +  L+  M R  + I    +   + S++ 
Sbjct: 223 AQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLIT 282

Query: 104 ACSSLGDLGSG-EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVV 162
           A S      +  ++V   ++K G   D  + ++++  +   G  D+A+ +F  +  ++ V
Sbjct: 283 AASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAV 342

Query: 163 SWSSIIASYFDNADVSEGLKMF---HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           + + +I          E +K+F    + V    +   V + +LAE       LR  R +H
Sbjct: 343 TLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVH 402

Query: 220 GHVLRRKIK-IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           GH+LR  +  +   + N  + MY+KCG + SA + F  +E     SW  +IS  +++G  
Sbjct: 403 GHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNC 462

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++A+  +  M +    P+   LI+ L SCAGL  L  G+ VHC  ++ G+  +   +   
Sbjct: 463 EEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTS-VSNV 521

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS-KEALELLVQMQTWGLMP 397
           L++ Y ECG MS+  KV +++ E + +SWN ++   A       E +++   M   GL+P
Sbjct: 522 LVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIP 581

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLF 456
           +  +  + L+A   +  L+LG Q+H  V+K    +D  V ++LI  Y+K G       LF
Sbjct: 582 NKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLF 641

Query: 457 ERI-QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
             +  ++  + WNSMI G+  NGN  EA++    M  +   MD  TF   + AC+++  L
Sbjct: 642 TNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAAL 701

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E+G  +H   I   +  D+ +++AL DMY+KCG +  A ++F+SM++RN  SW++MI  Y
Sbjct: 702 ERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGY 761

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDL 635
             HG    A  +F++ML S   P+ VTF+++L ACSH+G VE G  YF  M   G+ P +
Sbjct: 762 ARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQI 821

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK---RIDVMKTIEKE 692
           +HY+C++DLL R+G I+   + I  MP   N  IW  +L  CR  K    ID+ +   + 
Sbjct: 822 EHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRV 881

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           L      +   Y L SN +A  G W++  K R+ M     KK  G S
Sbjct: 882 LLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRS 928



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 185/705 (26%), Positives = 345/705 (48%), Gaps = 33/705 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL R   +      LH  L+  GL++D      L+ SYA+   L ++  VFD   E ++
Sbjct: 68  LPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNA 127

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIRE-QA--TISNFIYPSVLRACSSLGD--LGSGE 115
             W  L+  Y+ +   EE+  ++  M+RE QA    ++F + ++LRAC   G   LG   
Sbjct: 128 VSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAV 187

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGE--FGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           +VHG + K  +  +  +  +++  YG    G    A++VFD    RD+++W+++++ Y  
Sbjct: 188 QVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAK 247

Query: 174 NADVSEGLKMFHSMVR-------EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
             DV+    +F  M R          E  F ++++ A       ++     +   VL+  
Sbjct: 248 KGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLV--WVLKSG 305

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              D  +G++ +  +++ G    A+  F+ ++++   +   +I    R  + ++A++ FV
Sbjct: 306 CSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFV 365

Query: 287 ---KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
                ++V  +  ++ L  +         LR G+ VH  ++R G+      +   L+  Y
Sbjct: 366 GTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMY 425

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
           A+CG +    K+   +   + +SWN +IS   + G  +EA+     M+   + P +F++ 
Sbjct: 426 AKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485

Query: 404 SSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           SSLS+C  +  L  G Q+H   +K  +D  D  V + L+ MY +CG  +  + +F  + +
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAVKWGLDL-DTSVSNVLVKMYGECGAMSDYWKVFNSMAE 544

Query: 462 KSVVMWNSMICGFYQNGNSL-EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
              V WN+M+     +   + E + +F+ M    L  ++VTF+  + A S +  LE GK 
Sbjct: 545 HDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ 604

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHG 579
           VH  ++ +GV +D  +D AL   YAK GD+ + + +F +MS+ R+ +SW++MI  Y  +G
Sbjct: 605 VHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNG 664

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV----EPDL 635
            L +A      M+ SG   +  TF  IL AC+   ++E G      +  FG+    E D+
Sbjct: 665 NLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGM----ELHAFGIRSHLESDV 720

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
              + +VD+ S+ G ++ A K+ +SM    N   W ++++G   H
Sbjct: 721 VVESALVDMYSKCGRVDYASKLFNSMT-QRNEFSWNSMISGYARH 764



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/180 (19%), Positives = 82/180 (45%), Gaps = 4/180 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C ++  L R   LHA  + + L  D    + L++ Y++ G +  +  +F++  + +
Sbjct: 691 ILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRN 750

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W  +I  Y  +    ++I ++ +M+R + +  +  + SVL ACS  G +  G +   
Sbjct: 751 EFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE 810

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVS 178
            +   G        + ++   G  G +D  ++   +M    + + W +++ +   + D S
Sbjct: 811 MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGS 870


>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 655

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 207/652 (31%), Positives = 331/652 (50%), Gaps = 11/652 (1%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFD-KDDVIQTSILCTYGEFGCLDDARKVFDK 155
           ++  +L +C    +L  G+ +H  ++K         +  ++   Y     ++ AR VFD+
Sbjct: 1   MFLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60

Query: 156 MTSRDV--VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           +    +  ++W  +I +Y  N    + L +++ M+  GV P   T   + +AC  L ++ 
Sbjct: 61  IPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIE 120

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + IH HV       D  +  + +  Y+KCG+L  A + F ++ KR   +W AMIS ++
Sbjct: 121 DGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFS 180

Query: 274 RSGWFQKALESFVKMLEVK-EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
                   +  F+ M       PNL T++ +  +    G LREGK+VH    R G   + 
Sbjct: 181 LHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             +   +++ YA+   +    +V  +  ++N ++W+ +I  Y    M KEA E+ +QM  
Sbjct: 241 -VVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLV 299

Query: 393 WGLMPDSFSVASSL--SACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
              M     VA  L    C   G L  G  +H + IK     D  V +++I  Y+K G  
Sbjct: 300 NADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSL 359

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A+  F  I  K +V +NS+I G  +N  + E+  LFHQM  + +  D  T L  + AC
Sbjct: 360 CDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTAC 419

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           SN+  L  G   H   +  G   +  I  AL DMY KCG L  A+RVFD+M +R++VSW+
Sbjct: 420 SNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWN 479

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI- 628
            M+  +G+HG   +A SLF  M D+G+ P+EVT + IL ACSHSG V+EGK  FN+M   
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRG 539

Query: 629 -FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            F V P L HY CM DLL+R+G ++ A+  ++ MPF  +  + G LL+ C  +K +++  
Sbjct: 540 DFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGN 599

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            + K++   G        LLSN Y+    W++  K+R   + +GL K PGYS
Sbjct: 600 EVSKKMQSLGETTES-LVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYS 650



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/575 (29%), Positives = 299/575 (52%), Gaps = 19/575 (3%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPAS-TRLIESYAEMGSLRSSRLVFDTFK 56
           + L  SC   R L     +H HLL   L          L   YA    +  +R VFD   
Sbjct: 3   LRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62

Query: 57  EP--DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
            P  +   W ++I+ Y+ N F E+++ LY+KM+      + F YP VL+AC+ L  +  G
Sbjct: 63  HPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDG 122

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           + +H  +    F  D  + T+++  Y + G LD A KVFD+M  RD+V+W+++I+ +  +
Sbjct: 123 KLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLH 182

Query: 175 ADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             +++ + +F  M R + + P+  T++ +  A G   +LR  +++HG+  R     D  +
Sbjct: 183 CCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
               + +Y+K   ++ A R F    K+   +W+AMI  Y  +   ++A E F++ML V  
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQML-VNA 301

Query: 294 EPNLITLIT---VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
           +  ++T +    +L  CA  G L  G+ VHC  I+ G   +   +G  +I FYA+ G + 
Sbjct: 302 DMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLT-VGNTVISFYAKYGSLC 360

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +    IG ++I+S+N LIS       ++E+  L  QM++ G+ PD  ++   L+AC 
Sbjct: 361 DAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACS 420

Query: 411 NVGSLQLGLQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           N+ +L  G   HG+ V+     +  + ++L+DMY+KCG   +A  +F+ + ++ +V WN+
Sbjct: 421 NLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNT 480

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL---- 525
           M+ GF  +G   EA++LF+ M    +  DEVT L  + ACS+ G +++GK + + +    
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            +   R D Y    +TD+ A+ G L  A    + M
Sbjct: 541 FNVIPRLDHY--NCMTDLLARAGYLDEAYDFVNKM 573


>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
 gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 191/598 (31%), Positives = 322/598 (53%), Gaps = 6/598 (1%)

Query: 149 ARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           A + F++ ++   V  W+S I    +     + L +F  M + G+EP+ +T  S+A+AC 
Sbjct: 6   ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           +L +L+ ++ +H HV++ + + D  +  S + MY KC  L  A   F ++ KR   SW +
Sbjct: 66  KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNS 125

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  + + G+  + +  F +M       + +T+I +  S   L  L+  +S+H   I+ G
Sbjct: 126 MILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKGMSKEALE 385
           +  +   +    I  YA+CG+    E V   I  G +  +SWN +I+ YA      +A+ 
Sbjct: 186 IDTDVS-VSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVG 244

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYS 444
              +M   G   D  ++ S LS+C     L  G  IH H I++ C  +  V ++LI MYS
Sbjct: 245 FFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYS 304

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  LF+ +  K+ V W +MI G+ + G+  EA+ LF  M     + D VT ++
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIIS 364

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +  C   G LE GKW+     + G++ ++ +  AL D+YAKCG +  A+ +F +M E++
Sbjct: 365 LMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKS 424

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +VSW+ +I    ++G+  +A  LF QM++ G+KPN +TF+ +L AC+H+G +E+G   FN
Sbjct: 425 LVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFN 484

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            M +++ + P L HY+CM DLL R G ++ AF+ I +MPF  +  IW  LL+ C+IH+ +
Sbjct: 485 LMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNV 544

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + + +   L          Y  ++NIYA  G WD    +R++M+     K PG S +
Sbjct: 545 VIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLV 602



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 168/534 (31%), Positives = 266/534 (49%), Gaps = 21/534 (3%)

Query: 60  SFMWAVLIKCYMWNNFFEESI---------LLYHKMIREQATISNFIYPSVLRACSSLGD 110
           S +W V      WN+   ES+         LL+ +M +     +N  +PSV +ACS L +
Sbjct: 14  SNLWTVA----QWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLN 69

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L   + VH  ++K  F  D  +QTS++  Y +   L  A  +F +M  RDV SW+S+I  
Sbjct: 70  LKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILG 129

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +     V   + +F  M  EG+  D VT++ L  +   L  L+   SIH   ++  I  D
Sbjct: 130 FAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTD 189

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT--SWTAMISCYNRSGWFQKALESFVKM 288
             + N++I  Y+KCG+   AE  F  I+K   T  SW +MI+ Y       KA+  F KM
Sbjct: 190 VSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKM 249

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
           L      +L T++++L SC     L  GK +H   I+ G   +   +   LI  Y++CG 
Sbjct: 250 LCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVIN-TLISMYSKCGD 308

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +     +   +  +  +SW  +I+ YA KG   EA+ L   M+  G  PD  ++ S +S 
Sbjct: 309 IGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSG 368

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           CG  G+L+LG  I  +      KD   V ++LID+Y+KCG  + A  LF  + +KS+V W
Sbjct: 369 CGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSW 428

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
            ++I G   NG   EA+ LF QM    L+ + +TFL  +QAC++ G LEKG W    L++
Sbjct: 429 TTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKG-WECFNLMT 487

Query: 528 --YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             Y +   +   + + D+  + G L+ A     +M  + +V  WS ++    +H
Sbjct: 488 KVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIH 541



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 222/478 (46%), Gaps = 12/478 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL+    +H H++ +    D    T +++ Y +   L  +  +F    + D   W  +I 
Sbjct: 69  NLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMIL 128

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +    F +  + L+ +M  E     +     +  +  SL DL   E +H   IK G D 
Sbjct: 129 GFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDT 188

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D  +  + +  Y + G    A  VFD +    +  VSW+S+IA Y      S+ +  F  
Sbjct: 189 DVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKK 248

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+  G   D  T+LSL  +C +   L   + IH H ++     D  + N+ I MYSKCGD
Sbjct: 249 MLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGD 308

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + SA   F  +  +   SWTAMI+ Y   G   +A+  F  M  V E+P+L+T+I+++  
Sbjct: 309 IGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSG 368

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C   G L  GK +       G+      +  ALI+ YA+CG M    ++ + + E++++S
Sbjct: 369 CGQTGALELGKWIDTYATANGLKDNL-MVCNALIDVYAKCGSMDNARELFYTMPEKSLVS 427

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHG 423
           W  LI+  A  G  KEAL L  QM   GL P+  +  + L AC + G L+ G     +  
Sbjct: 428 WTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMT 487

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQN 477
            V KI+   D +  S + D+  + G    A+   + +  K  V +W+ ++  C  +QN
Sbjct: 488 KVYKINPGLDHY--SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQN 543



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 2/313 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE--PDSFMW 63
           S  +L+ L  +H+  +  G+  D   S   I +YA+ G    +  VFD   +       W
Sbjct: 167 SLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSW 226

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y       +++  + KM+            S+L +C     L  G+ +H   I+
Sbjct: 227 NSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQ 286

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G D D  +  +++  Y + G +  AR +FD M  +  VSW+++IA Y +  D+ E + +
Sbjct: 287 VGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTL 346

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F +M   G +PD VT++SL   CG+  +L   + I  +     +K +  + N+ I +Y+K
Sbjct: 347 FSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAK 406

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG + +A   F  + ++   SWT +I+    +G F++AL  F +M+E+  +PN IT + V
Sbjct: 407 CGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAV 466

Query: 304 LGSCAGLGWLREG 316
           L +C   G+L +G
Sbjct: 467 LQACNHAGFLEKG 479


>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 191/649 (29%), Positives = 348/649 (53%), Gaps = 14/649 (2%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDD-VIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           LR+C +L +     ++H  ++  G  +   V+   ++  Y   G    A  V D M  R+
Sbjct: 49  LRSCPTLAE---ARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRN 105

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPAR--- 216
             +W++ I    D+   +E L+ + +MVR+G V  D  T   + +AC  L  +   R   
Sbjct: 106 SFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVR 165

Query: 217 -SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
            ++   V+R  +     +  + + M++KCG L  A   F  + +R   +WTAMI     +
Sbjct: 166 ENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHA 225

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G +  A+  F +M       + + + TV+ +C     LR G  +H   +R G+G +   +
Sbjct: 226 GDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDD-TCV 284

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++ Y +CG +   ++V  +IG ++++SW+ LI+ Y++ G    ++ L  +M T GL
Sbjct: 285 SNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGL 344

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAY 453
            P+S ++AS L +   +   + G +IHG  ++   D + +F+ S+ ID YS+ G    A 
Sbjct: 345 KPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFD-QSKFLGSAFIDFYSRQGSIREAE 403

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           ++ E + ++ +V+WNSM+ G+  NGN+  A+  F  +       D VT ++ +  C++  
Sbjct: 404 IVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHS 463

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
           +L +GK +H  ++ + +     +  AL DMY KC  L+  + +F  +++R+  +++ +I 
Sbjct: 464 RLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLIS 523

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            +G HG  ++A  LF  M   GI P++VTF+ +L +CSH+G +E+G  +++ M + + + 
Sbjct: 524 SFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNIS 583

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P  +HY+C+VDL SRSG ++ A+K + S+   A   + G LL  CR+H R+D+ + + K 
Sbjct: 584 PGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKR 643

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +     +D GY+ LLSNIYA  G W    ++R+++E   LK   G S I
Sbjct: 644 IFEQNPSDPGYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNSLI 692



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 164/567 (28%), Positives = 289/567 (50%), Gaps = 9/567 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPA-STRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
            RSC  L +  RLHA LLV G H      + +L+ +YA +G    +  V D     +SF 
Sbjct: 49  LRSCPTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFA 108

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSG----EKV 117
           W   IK  + +  F E++  Y  M+R+ +  ++ F YP V++AC++LG +  G    E V
Sbjct: 109 WNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENV 168

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
              +++        +Q +++  + + GCL +AR VF+ M  RD+ +W+++I       D 
Sbjct: 169 EADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDW 228

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + + +F  M  EG   D V + ++  ACG    LR    +HG  +R  +  D  + N+ 
Sbjct: 229 LDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNAL 288

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCG L  A+R F  I  +   SW+ +I+ Y+++G    ++  F +M+    +PN 
Sbjct: 289 VDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNS 348

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T+ ++L S + +   R GK +H   +R G   +  +LG A I+FY+  G + E E V+ 
Sbjct: 349 NTMASILPSLSEMKLFRHGKEIHGFSLRNGF-DQSKFLGSAFIDFYSRQGSIREAEIVLE 407

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            + +R+++ WN +++ YA  G +  AL     +Q  G  PD  +V S L  C +   L  
Sbjct: 408 LMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQ 467

Query: 418 GLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           G ++H +V++        V ++LIDMY KC        +F+ +  +    +N++I  F +
Sbjct: 468 GKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGK 527

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIY 535
           +G+  EAI LF  M  + +  D+VTF+  + +CS+ G +EKG   +  ++  Y +     
Sbjct: 528 HGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKE 587

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSE 562
             + + D+Y++ G L  A +   S+ +
Sbjct: 588 HYSCVVDLYSRSGKLDDAWKFVSSLQD 614



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 219/435 (50%), Gaps = 11/435 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L++ +A+ G L  +R VF++  E D   W  +I   +    + +++ L+ +M  E     
Sbjct: 187 LVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLAD 246

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           + I  +V+ AC    +L +G  +HG  ++CG   D  +  +++  Y + GCL  A +VF 
Sbjct: 247 SVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFW 306

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
            +  +DVVSWS++IA Y  N      + +F  MV  G++P+  TM S+  +  E+   R 
Sbjct: 307 SIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRH 366

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + IHG  LR        LG++FI  YS+ G +  AE     + KR    W +M++ Y  
Sbjct: 367 GKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAV 426

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G    AL +F  + +V   P+ +T+++VL  C     L +GK +H  ++R  M      
Sbjct: 427 NGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCS- 485

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  ALI+ Y +C  + + +++   + +R+  ++N LIS + + G   EA+ L   M+  G
Sbjct: 486 VSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDG 545

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ------SSLIDMYSKCGF 448
           + PD  +  + LS+C + G ++ GL    H   I  +D  +       S ++D+YS+ G 
Sbjct: 546 IAPDKVTFVALLSSCSHAGLIEKGL----HFYDIMLQDYNISPGKEHYSCVVDLYSRSGK 601

Query: 449 KNLAYLLFERIQQKS 463
            + A+     +Q ++
Sbjct: 602 LDDAWKFVSSLQDEA 616



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 167/360 (46%), Gaps = 2/360 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR    LH   +  G+  D   S  L++ Y + G L  +  VF +    D 
Sbjct: 254 IPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDV 313

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W+ LI  Y  N     S+ L+ +M+      ++    S+L + S +     G+++HG 
Sbjct: 314 VSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGF 373

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ GFD+   + ++ +  Y   G + +A  V + M  RD+V W+S++A Y  N +    
Sbjct: 374 SLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSA 433

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L  F ++ + G  PD VT++S+   C     L   + +H +V+R  +     + N+ I M
Sbjct: 434 LCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDM 493

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KC  L   +  F  +  R T ++  +IS + + G   +A+  F  M      P+ +T 
Sbjct: 494 YCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTF 553

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +L SC+  G + +G   +  +++   + P  ++    +++ Y+  GK+ +  K + ++
Sbjct: 554 VALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHY-SCVVDLYSRSGKLDDAWKFVSSL 612


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 218/736 (29%), Positives = 368/736 (50%), Gaps = 27/736 (3%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSL-RSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +A  L +G   D   S+ ++  +A  G   R+ R + DT   PD+  W  LI  Y     
Sbjct: 43  YALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDT-PYPDTVSWNSLISGYARFRQ 101

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
                 L++ + R   +   F   S+++ C   G L   E  HG  +K G     V+ + 
Sbjct: 102 PGPVFDLFNGLRRSGLSPDEFSLSSLVKGC---GVLEQNEVAHGVCLKMGLLNGFVV-SG 157

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y + G +D A K F +    D V W++++  +  N +  +G ++F  M   G+  +
Sbjct: 158 LLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLE 217

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDLLSAERT 253
            +   SL    G L  +R    + G  ++  +       L N+ + MYS+CG    A + 
Sbjct: 218 -LNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKM 276

Query: 254 FVKIEKRCTTSWTAMI-SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
           F ++ +    SWT  I + Y+      +A E F  +L    E N   LI VL +      
Sbjct: 277 FDEMTEPDVVSWTERIGAAYDAI----EAFELFRLVLSGNMEVNEYMLINVLSAMREPKL 332

Query: 313 LREGKSVHCQIIRKGMGPEYDYL-----GPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           L+ G+ +      +G+  +  YL       ALI  Y +CG+M     +   +   + +SW
Sbjct: 333 LKSGRQI------QGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSW 386

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N LI+ YA  G+ K+AL++  QM+ + L P+ +++AS L    N    +  +QIH +++K
Sbjct: 387 NSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVK 446

Query: 428 ID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
           +    D+ + S LI  Y KC     +  ++  I Q +V+  N+M       G   +A+ L
Sbjct: 447 LGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKL 506

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F   +    E+D +T    ++AC  +  LE G+ +H   +  G+ +D ++++A+ D+Y K
Sbjct: 507 FQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCK 566

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG +  A + F ++S+ N+V+W+AM+  Y  HG  ++   LF +ML+ GI+P+E+T++ +
Sbjct: 567 CGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGV 626

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L +C H+G V E   Y ++M  + GV P L+HYACM+DL  R G +E A + I  MP   
Sbjct: 627 LNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMP 686

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           +  IW  LL+GC IH  +D+ +   K+L      ++  Y LLSN+YA  G W+  GK+R 
Sbjct: 687 DAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRR 746

Query: 726 IMEVTGLKKVPGYSTI 741
           +M+   + K PG S I
Sbjct: 747 VMKKKIICKEPGSSWI 762



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 273/589 (46%), Gaps = 17/589 (2%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           +YP  LRA +SL      ++ +   +K GF  D  + + I+  +   G    AR+     
Sbjct: 22  LYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDT 81

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
              D VSW+S+I+ Y           +F+ + R G+ PD  ++ SL + CG    L    
Sbjct: 82  PYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCG---VLEQNE 138

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
             HG  L+  + ++G + +  +  Y+K GD+ SAE+ F +     +  WTAM+  +  +G
Sbjct: 139 VAHGVCLKMGL-LNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNG 197

Query: 277 WFQKALESFVKM--LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM--GPEY 332
            F+K  E FV+M  L +  E N  +L +VLG+   L  +REG+ V    ++ G+  G   
Sbjct: 198 EFEKGREVFVEMRGLGLGLELNEFSLTSVLGA---LSDVREGEQVFGLSVKMGLLCGCSI 254

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            +L  AL+  Y+ CG  S+  K+   + E +++SW   I        + EA EL   + +
Sbjct: 255 -HLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYD---AIEAFELFRLVLS 310

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNL 451
             +  + + + + LSA      L+ G QI G   K        V ++LI MY KCG    
Sbjct: 311 GNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVA 370

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F+ +     V WNS+I G+ +NG   +A+ +F QM    L+ ++ T  + ++  +N
Sbjct: 371 ARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAAN 430

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
               E+   +H  ++  G   D  + + L   Y KC  +  ++RV+  +S+ NV+  +AM
Sbjct: 431 SNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAM 490

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
                  G   DA  LF+       + + +T   +L AC     +E G+   +     G+
Sbjct: 491 AATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGM 550

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
             D    + ++D+  + G ++ A K   ++    N   W A++ G   H
Sbjct: 551 SQDNFVESAVIDVYCKCGTVDEAAKTFMNVS-KNNLVAWNAMVMGYAQH 598



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 212/464 (45%), Gaps = 43/464 (9%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L +S   ++ L +   +LLV  ++        LI  Y + G + ++R +FD     DS  
Sbjct: 332 LLKSGRQIQGLCQKAGYLLVASVN------NALIFMYGKCGEMVAARHIFDEMLCGDSVS 385

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  LI  Y  N   ++++ ++ +M       + +   S+L   ++        ++H  I+
Sbjct: 386 WNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIV 445

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K GF  DD + + ++  YG+   + ++++V+  ++  +V+  +++ A+       ++ LK
Sbjct: 446 KLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALK 505

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F +  R   E D +T+  + +ACG L  L   R+IH   L+  +  D  + ++ I +Y 
Sbjct: 506 LFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYC 565

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG +  A +TF+ + K    +W AM+  Y + G + +  E F KMLE+  +P+ IT + 
Sbjct: 566 KCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLG 625

Query: 303 VLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           VL SC   G + E  +    ++   G+ P         +E YA                 
Sbjct: 626 VLNSCCHAGLVNEAHTYLSSMLELHGVVP--------CLEHYA----------------- 660

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
                   +I  + R G+ ++A   + QM    +MPD+      LS C   G++ LG   
Sbjct: 661 -------CMIDLFGRVGLLEDAKRTIDQMP---IMPDAQIWQILLSGCNIHGNVDLGEVA 710

Query: 422 HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
              +I++  +++     L ++Y+  G  N A     R+ +K ++
Sbjct: 711 AKKLIELQPENDSAYVLLSNLYASAGRWN-AVGKLRRVMKKKII 753


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 197/729 (27%), Positives = 376/729 (51%), Gaps = 5/729 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++  GL  +      L+  Y +   + ++R +FD       F W V+I  +  +  
Sbjct: 45  IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F  ++ L+ +M+      + F + SV+R+C+ L D+  G +VHG +IK GF+ + V+ +S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +   Y + G   +A ++F  + + D +SW+ +I+S        E L+ +  MV+ GV P+
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T + L  A   L  L   ++IH +++ R I ++  L  S +  YS+   +  A R   
Sbjct: 225 EFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
              ++    WT+++S + R+   ++A+ +F++M  +  +PN  T   +L  C+ +  L  
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS-ECEKVIHAIGERNILSWNMLISEY 374
           GK +H Q I+ G     D +G AL++ Y +C     E  +V  A+   N++SW  LI   
Sbjct: 344 GKQIHSQTIKVGFEDSTD-VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGL 402

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
              G  ++   LL++M    + P+  +++  L AC  +  ++  L+IH ++++     E 
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462

Query: 435 V-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           V  +SL+D Y+     + A+ +   ++++  + + S++  F + G    A+++ + MY +
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            + MD+++    I A +N+G LE GK +H   +  G      +  +L DMY+KCG L+ A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           ++VF+ ++  +VVSW+ ++     +G ++ A S F++M     +P+ VTF+ +L ACS+ 
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642

Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
              + G  YF  M +I+ +EP ++HY  +V +L R+G +E A  ++ +M    N  I+  
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 702

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  CR    + + + +  +      +D   Y LL+++Y E G  +   K R++M    L
Sbjct: 703 LLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762

Query: 733 KKVPGYSTI 741
            K  G ST+
Sbjct: 763 SKKLGKSTV 771



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 298/569 (52%), Gaps = 13/569 (2%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G  +H  +IK G  ++  +  ++L  Y +   + +ARK+FD+M+ R V +W+ +I+++  
Sbjct: 42  GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           + + +  L +F  M+  G  P+  T  S+  +C  L  +     +HG V++   + +  +
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           G+S   +YSKCG    A   F  ++   T SWT MIS    +  +++AL+ + +M++   
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            PN  T + +LG+ + LG L  GK++H  II +G+ P    L  +L++FY++  KM +  
Sbjct: 222 PPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGI-PLNVVLKTSLVDFYSQFSKMEDAV 279

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V+++ GE+++  W  ++S + R   +KEA+   ++M++ GL P++F+ ++ LS C  V 
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339

Query: 414 SLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL-AYLLFERIQQKSVVMWNSMI 471
           SL  G QIH   IK+  +D   V ++L+DMY KC    + A  +F  +   +VV W ++I
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G   +G   +   L  +M    +E + VT    ++ACS +  + +   +H  L+   V 
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD 459

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            ++ +  +L D YA    +  A  V  SM  R+ +++++++  +   G+   A S+   M
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM 519

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA----CMVDLLSR 647
              GI+ ++++    + A ++ G++E GK     +  + V+      A     +VD+ S+
Sbjct: 520 YGDGIRMDQLSLPGFISASANLGALETGKH----LHCYSVKSGFSGAASVLNSLVDMYSK 575

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            G +E A K+   +  P   S W  L++G
Sbjct: 576 CGSLEDAKKVFEEIATPDVVS-WNGLVSG 603



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 175/660 (26%), Positives = 311/660 (47%), Gaps = 43/660 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + RSC  LR ++   R+H  ++ TG   +    + L + Y++ G  + +  +F + +  D
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           +  W ++I   +    + E++  Y +M++     + F +  +L A S LG L  G+ +H 
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHS 248

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            II  G   + V++TS++  Y +F  ++DA +V +    +DV  W+S+++ +  N    E
Sbjct: 249 NIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE 308

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +  F  M   G++P+  T  ++   C  + SL   + IH   ++   +    +GN+ + 
Sbjct: 309 AVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVD 368

Query: 240 MYSKC-GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
           MY KC    + A R F  +      SWT +I      G+ Q      ++M++ + EPN++
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL  VL +C+ L  +R    +H  ++R+ +  E   +G +L++ YA   K+     VI +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM-VVGNSLVDAYASSRKVDYAWNVIRS 487

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R+ +++  L++ +   G  + AL ++  M   G+  D  S+   +SA  N+G+L+ G
Sbjct: 488 MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG 547

Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +H + +K        V +SL+DMYSKCG    A  +FE I    VV WN ++ G   N
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASN 607

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G    A++ F +M +   E D VTFL  + ACSN      G+     L  + V K IY  
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSN------GRLTDLGLEYFQVMKKIY-- 659

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
                                   E  V  +  ++   G  G+L +A  + + M    +K
Sbjct: 660 ----------------------NIEPQVEHYVHLVGILGRAGRLEEATGVVETM---HLK 694

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFN-AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PN + F  +L AC + G++  G+   N  + +   +P L  Y  + DL   SG  E A K
Sbjct: 695 PNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPAL--YILLADLYDESGKPELAQK 752



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 221/459 (48%), Gaps = 10/459 (2%)

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           E  S R    IH  V++  +  +  L N+ + +Y K   + +A + F ++  R   +WT 
Sbjct: 35  ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTV 94

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MIS + +S  F  AL  F +M+     PN  T  +V+ SCAGL  +  G  VH  +I+ G
Sbjct: 95  MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                  +G +L + Y++CG+  E  ++  ++   + +SW M+IS        +EAL+  
Sbjct: 155 FEGN-SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKC 446
            +M   G+ P+ F+    L A   +G L+ G  IH ++I        V ++SL+D YS+ 
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQF 272

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
                A  +     ++ V +W S++ GF +N  + EA+  F +M    L+ +  T+   +
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT-AQRVFDSMSERNV 565
             CS +  L+ GK +H + I  G      +  AL DMY KC   +  A RVF +M   NV
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS---HSGSVEEGKFY 622
           VSW+ +I     HG + D   L  +M+   ++PN VT   +L ACS   H   V E   Y
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
                + G   ++     +VD  + S  ++ A+ +I SM
Sbjct: 453 LLRRHVDG---EMVVGNSLVDAYASSRKVDYAWNVIRSM 488


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 187/601 (31%), Positives = 317/601 (52%), Gaps = 12/601 (1%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L DA  +FD+M  ++VV+W++ I+    N        MF  M+  GV P+     +  
Sbjct: 84  GRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAAL 143

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC    +L     +H   +R     D  +G+  I +YS+CG L +AE  F ++E     
Sbjct: 144 AACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVV 203

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA-GLGWLREGKSVHCQ 322
            +T+++S   R+G   +A++   +M     +PN  T+ ++L  C  G+G     + +H  
Sbjct: 204 GYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPRGIG-----EQIHGY 258

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           ++ K MG +  Y   ALI+FY+  G     + V   +  +N++SW  ++    R G   +
Sbjct: 259 ML-KVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDD 317

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           AL +  +M + G+ P+ F+ + +LSACG+V    LG QIH   IK D   D  V ++L+ 
Sbjct: 318 ALRVFSEMISEGVQPNEFAFSIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLS 374

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY + GF +    +  +I+   +V W + I   +QNG S +A+ L  QM+      ++  
Sbjct: 375 MYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYA 434

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           F + + +C+++  L +G+ +H   +  G    +    AL +MY+KCG + +A+  FD M 
Sbjct: 435 FSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMD 494

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
             +V+SW+++I     HG  N A   F +M  S  +P++ TF+++L  C+H+G V+EG+ 
Sbjct: 495 THDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGET 554

Query: 622 YFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           +F  M   +G+ P   HYACM+D+L R+G    A +MI +MPF  +  IW  LL  C++H
Sbjct: 555 FFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLH 614

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
           + +D+ K    +L      D+  Y L+SN+YA    W +  +VR  M+  G+KK  G+S 
Sbjct: 615 RNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSW 674

Query: 741 I 741
           I
Sbjct: 675 I 675



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 166/626 (26%), Positives = 290/626 (46%), Gaps = 51/626 (8%)

Query: 14  TRLHAHLLVTGLHYDPPASTRL----IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           TR      V   H  PP    L    ++   + G L  +  +FD     +   W   I  
Sbjct: 51  TRTPTAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISG 110

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              N   E +  ++  M+      ++F   + L AC++ G LG GE+VH   ++ GF  D
Sbjct: 111 CTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAAD 170

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             I + ++  Y   G L  A +VF +M + DVV ++S++++   N +++  + +   M R
Sbjct: 171 AWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTR 230

Query: 190 EGVEPDFVTMLS-LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           +G++P+  TM S LAE     C       IHG++L+           + I  YS+ GD  
Sbjct: 231 QGLQPNEHTMTSMLAE-----CPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFG 285

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A+  F  +E +   SW +M+    R G    AL  F +M+    +PN       L +C 
Sbjct: 286 TAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC- 344

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
             G +  G+ +HC  I++ +  +   +  AL+  Y   G +SE E V+  I   +++SW 
Sbjct: 345 --GSVCLGRQIHCSAIKRDLMTDI-RVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWT 401

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
             IS   + G S++A+ LL+QM + G  P+ ++ +S LS+C ++  L  G Q+H   +K+
Sbjct: 402 AAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKL 461

Query: 429 DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
            C  +    ++LI+MYSKCG    A L F+ +    V+ WNS+I G  Q+G++  A+  F
Sbjct: 462 GCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETF 521

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAK 546
            +M  +    D+ TFL+ +  C++ G +++G+    ++   YG+         + DM  +
Sbjct: 522 SEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGR 581

Query: 547 CGDLQTAQRVFDSM-----------------------------------SERNVVSWSAM 571
            G    A R+ ++M                                   SER+  S+  M
Sbjct: 582 NGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLM 641

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIK 597
            + Y MH +  DA  + ++M + G+K
Sbjct: 642 SNLYAMHEEWRDAERVRRRMDEIGVK 667



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 14/321 (4%)

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           AL L  +  T  L+P   S A + +      ++ +        + +DCK        +D 
Sbjct: 29  ALHLHAKQPTPRLLPVPPSHARTRTP--TAAAVNVSHAAPPPDVVLDCKR-------LDG 79

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
             K G    A  LF+R+ +K+VV W + I G  +NG    A  +F  M  + +  ++   
Sbjct: 80  LMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFAC 139

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
             A+ AC+  G L  G+ VH   +  G   D +I + L ++Y++CG L+ A+ VF  M  
Sbjct: 140 NAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEA 199

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
            +VV +++++     +G+L  A  +  QM   G++PNE T  ++L  C   G  E+   Y
Sbjct: 200 PDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR-GIGEQIHGY 258

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
              +++ G +  +     ++D  SR GD  G  K +       N   W +++  C    R
Sbjct: 259 M--LKVMGSQ-SVYASTALIDFYSRYGDF-GTAKTVFENLESKNVVSWCSMMQLCIRDGR 314

Query: 683 IDVMKTIEKELSVTGTNDNGY 703
           +D    +  E+   G   N +
Sbjct: 315 LDDALRVFSEMISEGVQPNEF 335


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 204/666 (30%), Positives = 338/666 (50%), Gaps = 42/666 (6%)

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           T +  +  S+LR   S+      +++H +++K          + +L  Y     L D+ +
Sbjct: 5   TSTEALVNSLLRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLR 63

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +F+ +     ++W S+I  Y  +    + L  F  M+  G+ PD     S+ +AC  L  
Sbjct: 64  LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMD 123

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL-------LSAERTFVKIEKRCTTS 264
           L    S+HG+++R  +  D   GN+ + MYSK   L       L A +   ++ +R  + 
Sbjct: 124 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSV 183

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
            TA +   N+ G     +E+F   +                SC         +    Q++
Sbjct: 184 RTASVLVGNQ-GRKVSDIEAFNYDV----------------SC-------RSREFEAQVL 219

Query: 325 RKGMGPEYDY-------LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
                P  +Y       LG  + +  +    +    K+   + E++++SWN +I+  AR 
Sbjct: 220 EIDYKPRSEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARN 278

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQ 436
           G+  E L ++ +M    L PDSF+++S L        +  G +IHG  I+     E +V 
Sbjct: 279 GLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVA 338

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           SSLIDMY+KC     +Y +F  + ++  + WNS+I G  QNG   E +  F QM +  ++
Sbjct: 339 SSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIK 398

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
               +F + + AC+++  L  GK +H  +   G  ++I+I ++L DMYAKCG+++TA+++
Sbjct: 399 PKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQI 458

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           FD M  R++VSW+AMI    +HG   DA  LF+QM   GI+PN V FM +L ACSH+G V
Sbjct: 459 FDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLV 518

Query: 617 EEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           +E   YFN+M + FG+ P ++HYA + DLL R+G +E A+  I  MP    GS+W  LL+
Sbjct: 519 DEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLS 578

Query: 676 GCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKV 735
            CR+HK +D+ + +   +      + G Y LL+NIY+    W E  K R+ +  TG++K 
Sbjct: 579 ACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKT 638

Query: 736 PGYSTI 741
           P  S I
Sbjct: 639 PACSWI 644



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 283/576 (49%), Gaps = 50/576 (8%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y+ +  L  S  +F+T   P +  W  +I+CY  +    +S+  +  M+       + ++
Sbjct: 52  YSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVF 111

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD-------ARK 151
           PSVL+AC+ L DL  GE +HG II+ G D D     +++  Y +   L         A +
Sbjct: 112 PSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQ 171

Query: 152 VFDKMT--SRDVVSWSSIIASYFD--------NADVSEGLKMFHSMVREGVEPDFVTMLS 201
           V D+MT  +R V + S ++ +           N DVS   + F + V   +E D+     
Sbjct: 172 VLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQV---LEIDYKPRSE 228

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
             E   E C+L       G  ++              + +S   D  S  + F  + ++ 
Sbjct: 229 YREM--EACNL-------GQQIKD-------------ISHSMSVD--SVRKIFEMMPEKD 264

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SW  +I+   R+G + + L    +M     +P+  TL +VL   A    + +GK +H 
Sbjct: 265 LVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHG 324

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             IR+G+  E  Y+  +LI+ YA+C ++ +  +V   + ER+ +SWN +I+   + G+  
Sbjct: 325 CSIRQGLDAEV-YVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFD 383

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSL 439
           E L+   QM    + P S+S +S + AC ++ +L LG Q+HG++ + +  DE  F+ SSL
Sbjct: 384 EGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR-NGFDENIFIASSL 442

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           +DMY+KCG    A  +F+R++ + +V W +MI G   +G++L+AI LF QM    +E + 
Sbjct: 443 VDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNY 502

Query: 500 VTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           V F+  + ACS+ G +++  K+ +   + +G+   +    A++D+  + G L+ A     
Sbjct: 503 VAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFIC 562

Query: 559 SMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLD 593
            M      S W+ ++    +H  ++ A  +  ++L+
Sbjct: 563 GMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILE 598



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 111/206 (53%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL     ++ K   +H   +  GL  +   ++ LI+ YA+   +  S  VF    E D 
Sbjct: 307 LPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDG 366

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I   + N  F+E +  + +M+  +    ++ + S++ AC+ L  L  G+++HG 
Sbjct: 367 ISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGY 426

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I + GFD++  I +S++  Y + G +  AR++FD+M  RD+VSW+++I     +    + 
Sbjct: 427 ITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDA 486

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC 206
           +++F  M  EG+EP++V  +++  AC
Sbjct: 487 IELFEQMKTEGIEPNYVAFMAVLTAC 512



 Score = 46.2 bits (108), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MP     T L    +LH ++   G   +   ++ L++ YA+ G++R++R +FD  +  D 
Sbjct: 408 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDM 467

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W  +I     +    ++I L+ +M  E    +   + +VL ACS  G
Sbjct: 468 VSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAG 516


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 187/601 (31%), Positives = 317/601 (52%), Gaps = 12/601 (1%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L DA  +FD+M  ++VV+W++ I+    N        MF  M+  GV P+     +  
Sbjct: 84  GRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAAL 143

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC    +L     +H   +R     D  +G+  I +YS+CG L +AE  F ++E     
Sbjct: 144 AACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVV 203

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA-GLGWLREGKSVHCQ 322
            +T+++S   R+G   +A++   +M     +PN  T+ ++L  C  G+G     + +H  
Sbjct: 204 GYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPRGIG-----EQIHGY 258

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           ++ K MG +  Y   ALI+FY+  G     + V   +  +N++SW  ++    R G   +
Sbjct: 259 ML-KVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDD 317

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           AL +  +M + G+ P+ F+ + +LSACG+V    LG QIH   IK D   D  V ++L+ 
Sbjct: 318 ALRVFSEMISEGVQPNEFAFSIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLS 374

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY + GF +    +  +I+   +V W + I   +QNG S +A+ L  QM+      ++  
Sbjct: 375 MYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYA 434

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           F + + +C+++  L +G+ +H   +  G    +    AL +MY+KCG + +A+  FD M 
Sbjct: 435 FSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMD 494

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
             +V+SW+++I     HG  N A   F +M  S  +P++ TF+++L  C+H+G V+EG+ 
Sbjct: 495 THDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGET 554

Query: 622 YFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           +F  M   +G+ P   HYACM+D+L R+G    A +MI +MPF  +  IW  LL  C++H
Sbjct: 555 FFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLH 614

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
           + +D+ K    +L      D+  Y L+SN+YA    W +  +VR  M+  G+KK  G+S 
Sbjct: 615 RNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSW 674

Query: 741 I 741
           I
Sbjct: 675 I 675



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 291/628 (46%), Gaps = 51/628 (8%)

Query: 14  TRLHAHLLVTGLHYDPPASTRL----IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           TR      V   H  PP    L    ++   + G L  +  +FD     +   W   I  
Sbjct: 51  TRTPTAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISG 110

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              N   E +  ++  M+      ++F   + L AC++ G LG GE+VH   ++ GF  D
Sbjct: 111 CTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAAD 170

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             I + ++  Y   G L  A +VF +M + DVV ++S++++   N +++  + +   M R
Sbjct: 171 AWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTR 230

Query: 190 EGVEPDFVTMLS-LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           +G++P+  TM S LAE     C       IHG++L+           + I  YS+ GD  
Sbjct: 231 QGLQPNEHTMTSMLAE-----CPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFG 285

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A+  F  +E +   SW +M+    R G    AL  F +M+    +PN       L +C 
Sbjct: 286 TAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC- 344

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
             G +  G+ +HC  I++ +  +   +  AL+  Y   G +SE E V+  I   +++SW 
Sbjct: 345 --GSVCLGRQIHCSAIKRDLMTDI-RVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWT 401

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
             IS   + G S++A+ LL+QM + G  P+ ++ +S LS+C ++  L  G Q+H   +K+
Sbjct: 402 AAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKL 461

Query: 429 DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
            C  +    ++LI+MYSKCG    A L F+ +    V+ WNS+I G  Q+G++  A+  F
Sbjct: 462 GCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETF 521

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAK 546
            +M  +    D+ TFL+ +  C++ G +++G+    ++   YG+         + DM  +
Sbjct: 522 SEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGR 581

Query: 547 CGDLQTAQRVFDSM-----------------------------------SERNVVSWSAM 571
            G    A R+ ++M                                   SER+  S+  M
Sbjct: 582 NGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLM 641

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPN 599
            + Y MH +  DA  + ++M + G+K +
Sbjct: 642 SNLYAMHEEWRDAERVRRRMDEIGVKKD 669



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 14/321 (4%)

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDM 442
           AL L  +  T  L+P   S A + +      ++ +        + +DCK        +D 
Sbjct: 29  ALHLHAKQPTPRLLPVPPSHARTRTP--TAAAVNVSHAAPPPDVVLDCKR-------LDG 79

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
             K G    A  LF+R+ +K+VV W + I G  +NG    A  +F  M  + +  ++   
Sbjct: 80  LMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFAC 139

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
             A+ AC+  G L  G+ VH   +  G   D +I + L ++Y++CG L+ A+ VF  M  
Sbjct: 140 NAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEA 199

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
            +VV +++++     +G+L  A  +  QM   G++PNE T  ++L  C   G  E+   Y
Sbjct: 200 PDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR-GIGEQIHGY 258

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
              +++ G +  +     ++D  SR GD  G  K +       N   W +++  C    R
Sbjct: 259 M--LKVMGSQ-SVYASTALIDFYSRYGDF-GTAKTVFENLESKNVVSWCSMMQLCIRDGR 314

Query: 683 IDVMKTIEKELSVTGTNDNGY 703
           +D    +  E+   G   N +
Sbjct: 315 LDDALRVFSEMISEGVQPNEF 335


>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
 gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
          Length = 610

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 178/525 (33%), Positives = 295/525 (56%), Gaps = 6/525 (1%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P   T  +L + C     L   R++H  +  R +  +     +   MY KC   + A R 
Sbjct: 57  PVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRV 116

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML--EVKEEPNLITLITVLGSCAGLG 311
           F ++  R   +W A+++ Y R+G    A+E+ V+M   E  E+P+ ITL++VL +CA   
Sbjct: 117 FDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADAR 176

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L   + VH   +R G+  E   +  A+++ Y +CG +     V   +  RN +SWN +I
Sbjct: 177 VLGACREVHAFALRAGLD-ELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMI 235

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA  G + EAL L  +M   G+     +V ++L AC  +G L    ++H  ++++  K
Sbjct: 236 DGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLK 295

Query: 432 DEF-VQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
               V ++LI  YSKC   +LA   F  +  +K+ + WN+MI GF QNG S +A  LF +
Sbjct: 296 SNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFAR 355

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  ++ D  T ++ I A ++I    + +W+H   I + + +DIY+ TAL DMY+KCG 
Sbjct: 356 MQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGR 415

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           +  A+++FDS  +R+V++W+AMI  YG HG    A  LF++M  +G  PNE TF+++L A
Sbjct: 416 VTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAA 475

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           CSH+G V+EG+ YF +M+ +G+EP ++HY  +VDLL R+G ++ A+  I +MP     S+
Sbjct: 476 CSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISV 535

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
           +GA+L  C++HK +++ +   +++   G  + G  +   N   EE
Sbjct: 536 YGAMLGACKLHKNVELAEESAQKIFELGP-EEGSLSQTMNASMEE 579



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 241/493 (48%), Gaps = 18/493 (3%)

Query: 2   PLFRSCTNLRKL----------TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLV 51
           P+ R+ T L KL            +HA L   GL  +  A+T L   Y +      +R V
Sbjct: 57  PVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRV 116

Query: 52  FDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA--TISNFIYPSVLRACSSLG 109
           FD     D   W  L+  Y  N     ++    +M  E+      +    SVL AC+   
Sbjct: 117 FDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADAR 176

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
            LG+  +VH   ++ G D+   + T++L  Y + G ++ AR VFD M  R+ VSW+++I 
Sbjct: 177 VLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMID 236

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
            Y +N + SE L +F  MV+EGV+     +L+  +AC EL  L  AR +H  ++R  +K 
Sbjct: 237 GYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKS 296

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKM 288
           +  + N+ I  YSKC     A   F ++  K+   SW AMI  + ++G  + A   F +M
Sbjct: 297 NVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARM 356

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                +P+  TL++V+ + A +    + + +H   IR  +  +  Y+  ALI+ Y++CG+
Sbjct: 357 QLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDI-YVLTALIDMYSKCGR 415

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           ++   K+  +  +R++++WN +I  Y   G  + A+EL  +M+  G +P+  +  S L+A
Sbjct: 416 VTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAA 475

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVM 466
           C + G +  G +    +     +       +L+D+  + G  + A+   + +  +  + +
Sbjct: 476 CSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISV 535

Query: 467 WNSMI--CGFYQN 477
           + +M+  C  ++N
Sbjct: 536 YGAMLGACKLHKN 548


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 212/642 (33%), Positives = 339/642 (52%), Gaps = 27/642 (4%)

Query: 114 GEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASY 171
           G  +H R++     D D ++  S+L  Y + G +  AR+VFD M   RD+VSW+++    
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC--GELCSLRPARSIHGHVLRRKIKI 229
             N    E L +   M+  G+ P+  T+ + A AC  GEL      RS  G VL   IK 
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGEL-----FRSSGGTVLGFAIKT 176

Query: 230 -----DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
                D  +G + I M+++ GDL++A + F  + +R    WT MI+ Y + G   KA+E 
Sbjct: 177 GFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVEL 236

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F+ MLE   EP+  T+ +++ +CA  G    G+ +H  ++R G+  +   +   L++ Y 
Sbjct: 237 FLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSD-TCVSCGLVDMYT 295

Query: 345 --ECGKMSEC-EKVIHAIGERNILSWNMLISEYAR-KGMSKEALELLVQMQTWGLMPDSF 400
             +  +  EC  KV   +   N++SW  LIS Y +  G    A+ELL +M    + P+  
Sbjct: 296 KLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHL 355

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERI 459
           + +S L AC N+     G QIH  V+K    +   V ++L+ MY++ G    A   F+++
Sbjct: 356 TYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
            +++++  +S I    ++  S  +     Q+    + +   TF + + A + +G   KG+
Sbjct: 416 YERNLLSTSSDIGETGRSNASWSS-----QIESMDVGVSTFTFASLLSAAATVGLPTKGQ 470

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SERNVVSWSAMIDCYGMH 578
            +H   I  G   D  I  +L  MY++CG L  A R FD M  + NV+SW+++I     H
Sbjct: 471 QLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKH 530

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQH 637
           G    A SLF  M+ SG+KPN+VT++ +L ACSH G V+EGK YF +M +   + P ++H
Sbjct: 531 GHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEH 590

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           YACMVDLL+RSG ++ A + I+ MP  A+  +W  LL  CR ++ I++ +   + +    
Sbjct: 591 YACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLE 650

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             D   Y LLSN+YA  G WDE  ++RS+M    L K  G S
Sbjct: 651 PQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLS 692



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 123/536 (22%), Positives = 245/536 (45%), Gaps = 44/536 (8%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           LI+ +A  G L ++R VF+   E    +W ++I  Y+      +++ L+  M+ +     
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF---GCLDDARK 151
            +   S++ AC+  G  G G+++H  +++ G   D  +   ++  Y +      ++ ARK
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARK 308

Query: 152 VFDKMTSRDVVSWSSIIASYFD-NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           VF +M + +V+SW+++I+ Y       +  +++   M+ E +EP+ +T  SL +AC  L 
Sbjct: 309 VFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLS 368

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
                R IH  V++  I     +GN+ + MY++ G +  A + F ++ +R   S ++ I 
Sbjct: 369 DQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG 428

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
              RS     +  S ++ ++V    +  T  ++L + A +G   +G+ +H   I+ G   
Sbjct: 429 ETGRS---NASWSSQIESMDVG--VSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFES 483

Query: 331 EYDYLGPALIEFYAECGKMSE-CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           +   +  +L+  Y+ CG + + C        + N++SW  +IS  A+ G ++ AL L   
Sbjct: 484 DKG-ISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHD 542

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFK 449
           M   G+ P+  +  + LSAC +VG ++ G              E+ +S   D        
Sbjct: 543 MILSGVKPNDVTYIAVLSACSHVGLVKEG-------------KEYFRSMQKD-------- 581

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
              + L  R++      +  M+    ++G   EA+   ++M     + D + + T + AC
Sbjct: 582 ---HRLIPRMEH-----YACMVDLLARSGLVQEALEFINEMP---CKADALVWKTLLGAC 630

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
                +E G+     +I     +D      L+++YA  G      R+   M  RN+
Sbjct: 631 RTYENIEIGEIAARHVIDLE-PQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNL 685



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 206/449 (45%), Gaps = 64/449 (14%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMG---SLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
           +LH+ +L  GL  D   S  L++ Y ++    S+  +R VF      +   W  LI  Y+
Sbjct: 270 QLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYV 329

Query: 72  WNNFFEE-SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
                E  ++ L  +M+ E    ++  Y S+L+AC++L D  SG ++H R++K      +
Sbjct: 330 QCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVN 389

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII----------ASYFDNADVSEG 180
           V+  +++  Y E GC+++ARK FD++  R+++S SS I          +S  ++ DV  G
Sbjct: 390 VVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDV--G 447

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +  F           F ++LS A   G        + +H   ++   + D  + NS + M
Sbjct: 448 VSTF----------TFASLLSAAATVGLPTK---GQQLHALSIKTGFESDKGISNSLVSM 494

Query: 241 YSKCGDLLSAERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           YS+CG L  A R F ++E      SWT++IS   + G  ++AL  F  M+    +PN +T
Sbjct: 495 YSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVT 554

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            I VL +C+ +G ++EGK     +       + D+     +E YA               
Sbjct: 555 YIAVLSACSHVGLVKEGKEYFRSM-------QKDHRLIPRMEHYA--------------- 592

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                     ++   AR G+ +EALE + +M       D+    + L AC    ++++G 
Sbjct: 593 ---------CMVDLLARSGLVQEALEFINEMPC---KADALVWKTLLGACRTYENIEIGE 640

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGF 448
               HVI ++ +D      L ++Y+  G 
Sbjct: 641 IAARHVIDLEPQDPAPYVLLSNLYAHGGL 669


>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
 gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
          Length = 630

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 199/635 (31%), Positives = 326/635 (51%), Gaps = 25/635 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFG---CLDDARKVF 153
           Y S+LR C     L  G +VH  I+  G F +   +   ++  Y + G    L DAR VF
Sbjct: 1   YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D+M  +DVVSWS IIA+Y       E + +F  M    VEP+ + ++S   AC     L 
Sbjct: 61  DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM---DVEPNEMVIVSTLAACSGAKDLA 117

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
              +IH  +L   ++    +G + + MY+KCG +  A   F +I  +   SWTAMI+ + 
Sbjct: 118 LGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFA 177

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G  ++ALE+   M++ + +PN +T +  + +C+   +L  G+ +H  +I  G+  +  
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDIT 237

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL+  YA+     E   V   + +RN +SWN +I+ +A    S  A+ L   M   
Sbjct: 238 -IQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLE 296

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHV---IKIDCKDEFVQSSLIDMYSKCGFKN 450
           G+ PD  S    LSAC +   L+   +IH  +         D  V++SL+  Y+KCG   
Sbjct: 297 GIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLE 356

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F+RI  K+VV W +M+  +  +GN  +A+ L+ +M    ++ D V  L  I A S
Sbjct: 357 AAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGS 416

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV---- 566
            +G +   + +H ++ S      I I  AL +MY +CG L+ A+RVFD +  +N+V    
Sbjct: 417 LVGDVGLARKLHARVASSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDT 476

Query: 567 -SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            +WS+++  Y  HG    A  L++ M   G++P+ VT+++IL +CSH+G + + + +F +
Sbjct: 477 VTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFFVS 536

Query: 626 M---RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           M         PD  H+ CMVD+L R+G +  A  ++ +MPF  +   W  LL  C++H  
Sbjct: 537 MVEDHCLAAWPD--HWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHG- 593

Query: 683 IDVMKTIEKELSVTGTNDN--GYYTLLSNIYAEEG 715
            D  +      +  G +    G   LLSN+YAE G
Sbjct: 594 -DARRGAVAARNAVGISPGFAGSTVLLSNMYAEIG 627



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 171/620 (27%), Positives = 303/620 (48%), Gaps = 37/620 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMG---SLRSSRLVFDT 54
           L R C   R L    R+H H+L TG H+         LI+ Y + G   SL  +R VFD 
Sbjct: 4   LLRRCGISRSLADGRRVHDHILATG-HFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQ 62

Query: 55  FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             + D   W+ +I  Y       E+I L+ +M  E    +  +  S L ACS   DL  G
Sbjct: 63  MPKKDVVSWSCIIAAYGQAGHCREAINLFQRMDVEP---NEMVIVSTLAACSGAKDLALG 119

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             +H RI+     K   + T++L  Y + G ++ AR VFD++  +DVVSW+++I ++   
Sbjct: 120 MAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQM 179

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            D  + L+    M++  V+P+ VT ++   AC     L   R IH  V+   +  D  + 
Sbjct: 180 GDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQ 239

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ + MY+K      A   F ++E R   SW +MI+ +  S     A+  F  M     +
Sbjct: 240 NALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGIK 299

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECE 353
           P+ ++ + VL +C+    LR  K +H Q+    +    D  +  +L+  YA+CG +   E
Sbjct: 300 PDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAE 359

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           ++   I  +N++SW  +++ Y   G   +ALEL  +M    + PDS  + + + A   VG
Sbjct: 360 RIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVG 419

Query: 414 SLQLGLQIHGHV------IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV--- 464
            + L  ++H  V      +KI      +Q++LI+MY++CG    A  +F+ I++K++   
Sbjct: 420 DVGLARKLHARVASSSFMLKIQ-----IQNALINMYTRCGSLEEARRVFDGIERKNLVAR 474

Query: 465 --VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
             V W+S++ G+  +G++  AI L+  M+L  ++ D VT+++ + +CS+ G L + +   
Sbjct: 475 DTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFF 534

Query: 523 HKLIS---YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
             ++         D +    + D+  + G +  A+ V  +M  + +VV+W+ ++ C  +H
Sbjct: 535 VSMVEDHCLAAWPDHW--KCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVH 592

Query: 579 GQLNDAASLFKQMLDSGIKP 598
           G     A   +  +  GI P
Sbjct: 593 GDARRGAVAARNAV--GISP 610


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 203/676 (30%), Positives = 349/676 (51%), Gaps = 11/676 (1%)

Query: 72  WNNFFEESILLYHKMIREQAT-ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
           W  F  +++  +    R Q   +       +++ C S+ D   G+++H   ++CG D  D
Sbjct: 31  WQGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGD 90

Query: 131 V-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
           + + TS++  Y  +  + D RKVF+ M  R+VV+W+S++  Y     + + + +F  M  
Sbjct: 91  IRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRA 150

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           EGV P+  T  S+         +   + +H   ++        + NS + MY+KCG +  
Sbjct: 151 EGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F ++E R   SW  +++    +G   +AL+ F             T  TV+  CA 
Sbjct: 211 ARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCAN 270

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNILSWN 368
           L  L   + +H  +++ G    Y  +  AL++ Y + G++ +   V   + G +N++SW 
Sbjct: 271 LKHLGLARQLHSSVLKHGFH-SYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWT 329

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I    + G    A  L  +M+  G+ P+  + ++ L+    V       QIH  VIK 
Sbjct: 330 AMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKT 385

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
           + +    V ++L+  YSK      A  +F+ I QK VV W++M+  + Q G+   A N F
Sbjct: 386 NYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAF 445

Query: 488 HQMYLNCLEMDEVTFLTAIQAC-SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
            +M ++ L+ +E T  +AI AC S    ++ G+  H   I +     + + +AL  MYA+
Sbjct: 446 IKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYAR 505

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            G ++ AQ VF+  ++R+++SW++M+  Y  HG    A  +F+QM   GI  + +TF+++
Sbjct: 506 KGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSV 565

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           +  C+H+G VEEG+ YF+ M R +G+ P + HYACMVDL SR+G ++    +I  MPFPA
Sbjct: 566 IMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPA 625

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
             +IW ALL  CR+HK +++ K   ++L      D+  Y LLSNIY+  G W E  +VR 
Sbjct: 626 GPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRK 685

Query: 726 IMEVTGLKKVPGYSTI 741
           +M+   ++K  G S I
Sbjct: 686 LMDTKKVRKEAGCSWI 701



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 177/647 (27%), Positives = 305/647 (47%), Gaps = 59/647 (9%)

Query: 15  RLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +LHA  +  G  H D    T L++ Y    S+   R VF+   + +   W  L+  Y+  
Sbjct: 76  QLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQA 135

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
               + + L+ +M  E    + F + SVL   +S G +  G+ VH + IK G      + 
Sbjct: 136 GVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVC 195

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH---SMVRE 190
            S++  Y + G +++AR VF +M +RD+VSW++++A    N    E L++FH   S +  
Sbjct: 196 NSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITM 255

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
             E  + T+++L   C  L  L  AR +H  VL+      G +  + +  Y+K G L  A
Sbjct: 256 LTESTYSTVINL---CANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312

Query: 251 ERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
              F+ +   +   SWTAMI    ++G    A   F +M E    PN +T  T+L     
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL----T 368

Query: 310 LGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           +        +H Q+I+      Y+    +G AL+  Y++     E   +   I +++++S
Sbjct: 369 VSEASFPPQIHAQVIKT----NYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVS 424

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN-VGSLQLGLQIHGHV 425
           W+ +++ YA+ G    A    ++M   GL P+ F+++S++ AC +    + LG Q H   
Sbjct: 425 WSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAIS 484

Query: 426 IKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           IK  C D   V S+L+ MY++ G    A  +FER   + ++ WNSM+ G+ Q+G S +A+
Sbjct: 485 IKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKAL 544

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDM 543
           ++F QM +  ++MD +TFL+ I  C++ G +E+G+     ++  YG+       T   D 
Sbjct: 545 DVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGI-------TPTMDH 597

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YA                         M+D Y   G+L++  SL + M           +
Sbjct: 598 YA------------------------CMVDLYSRAGKLDETMSLIEGM---PFPAGPTIW 630

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSG 649
             +L AC    +VE GK    A ++  +EP D   Y  + ++ S +G
Sbjct: 631 RALLGACRVHKNVELGK--LAAEKLLSLEPLDSATYVLLSNIYSAAG 675


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 200/608 (32%), Positives = 320/608 (52%), Gaps = 11/608 (1%)

Query: 139 TYGEFGCLDDARKVFDKMTSRDVVSWS-SIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
            Y   G    A  +  +M     VS+S S++ SY       E L ++ +M       D +
Sbjct: 54  VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR----AFDHL 109

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T    A+AC  L   R  R++H   L      D  + N+ I MY  CGD+ +AE  F  +
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAM 169

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
             R   SW A+I+   ++G+ ++ALE F +M       +  T+++VL +CA    L  G+
Sbjct: 170 RNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGR 229

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI-HAIGERNILSWNMLISEYAR 376
           +VH  +  KG+G +Y  +  ALI+ Y +C  + +  +V  H   +++++SW  +I  Y  
Sbjct: 230 AVHRLVEDKGLG-DYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVL 288

Query: 377 KGMSKEALELLVQMQTWGLM-PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF- 434
              + EA+ L  QM   G   P+  ++   LSAC ++ S +     H   I++  K +  
Sbjct: 289 NDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIA 348

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           V+++LID Y++CG   L  L  ER   ++   WN+ + G+  +G   +AI LF +M    
Sbjct: 349 VETALIDAYARCGKMKLMRLTLERGSWRAET-WNAALSGYTVSGREKKAIELFKRMIAES 407

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  D  T  + + A +    L++GK +H  L++ G  +   I T L D+Y+K GDL  A 
Sbjct: 408 VRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAW 467

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F  + E++VV+W+ +I  YG+HG    A  L+ +M++SG KPN VT   +L+ACSH+G
Sbjct: 468 ALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAG 527

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            ++EG   F  MR + G+ P+ +HY+C+VD+L R+G IE A ++I  MPF  + S+WGAL
Sbjct: 528 MIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGAL 587

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L  C +HK ++  +   K L      + G Y LL NIYA    W +   VR +M   GL 
Sbjct: 588 LGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLL 647

Query: 734 KVPGYSTI 741
           K PG S +
Sbjct: 648 KEPGSSLV 655



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 261/546 (47%), Gaps = 12/546 (2%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWA-VLIKCYMWNNFFEESILLYHKMIREQATISNFI 97
           Y   G   S+  +     +P    ++  L++ Y       E++ +Y  M        +  
Sbjct: 55  YCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAM----RAFDHLT 110

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +P   +AC+ L     G  VH R +  GF  D  +Q +++  Y   G +  A  VF  M 
Sbjct: 111 FPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMR 170

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +R VVSW+++IA    N      L++F  M  +GV  D  T++S+  AC +   L   R+
Sbjct: 171 NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRA 230

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-KRCTTSWTAMISCYNRSG 276
           +H  V  + +     + N+ I MY KC  L  A R F   +  +   SWTAMI  Y  + 
Sbjct: 231 VHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLND 290

Query: 277 WFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
              +A+    +ML      PN +T++ +L +CA +   +  K  H   IR G+  +   +
Sbjct: 291 RAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIA-V 349

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI+ YA CGKM +  ++    G     +WN  +S Y   G  K+A+EL  +M    +
Sbjct: 350 ETALIDAYARCGKM-KLMRLTLERGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESV 408

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
            PDS ++AS L A      L+ G  IH  ++ +   +   + + LID+YSK G  + A+ 
Sbjct: 409 RPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWA 468

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           LF+ + +K VV W ++I G+  +G++  AI L+ +M  +  + + VT  T + ACS+ G 
Sbjct: 469 LFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGM 528

Query: 515 LEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
           +++G  V   + + +G+  +    + L DM  + G ++ A R+   M  E +   W A++
Sbjct: 529 IDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALL 588

Query: 573 DCYGMH 578
               +H
Sbjct: 589 GACVLH 594



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +    +L++   +H  LL  G       +T LI+ Y++ G L ++  +F    E D 
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             W  +I  Y  +     +ILLY +M+      +     ++L ACS  G +  G KV
Sbjct: 479 VAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV 535


>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 611

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 212/652 (32%), Positives = 332/652 (50%), Gaps = 56/652 (8%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L+ CS+L  L +G+++H +I   G+ KD  + T ++  Y +   L  A+++FDKM   +
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
           V +W++I   Y  +    + ++ +  M    V PD      +  AC +L        IH 
Sbjct: 61  VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            V+    + +  + NS I MY KCG+  SA   F ++E+R   SW +MIS Y  +G    
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           A+E    M     EP+++T  T                                    L+
Sbjct: 181 AVELLNCMRLDGFEPDVVTWNT------------------------------------LM 204

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM-PDS 399
           + Y + G+  E  +V+  I + NI+SW  LIS Y++ G    +L +   M    ++ PD 
Sbjct: 205 DAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDL 264

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS---LIDMYSKCGFKNLAYLLF 456
             + S L +C ++G+L+ G +IHG+  K++    F  S+   L+ MY+KCG    A  +F
Sbjct: 265 DCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVF 324

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E + +  +V WN+MI GF +     +AI  F +M    ++ D+ T  T +  C     L+
Sbjct: 325 ELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD----LQ 380

Query: 517 KGKWVHHKLISYGVRKDIYIDTALT------DMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            G  +H    +Y VRK I + + +T       MY KCG +++A  +F SM  ++VVSW+ 
Sbjct: 381 YGNPIH----AY-VRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNT 435

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI  +GMHG    A  L K+M+ SGI PN  TF ++L ACSHSG V+EG   F +M   +
Sbjct: 436 MIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDY 495

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            + P ++HY+C+VD+L+R+G    A   IH MP   + SIWGALL  CR ++ +D  +  
Sbjct: 496 SITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLA 555

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++L        G+Y  LSNIYA  G WD+ G+VR  +E  GL K  G S I
Sbjct: 556 AEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLI 607



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 176/672 (26%), Positives = 309/672 (45%), Gaps = 106/672 (15%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + + C+NL+ L    ++H  + V+G   DP   T+LI+ YA+   L S++ +FD   +P+
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + W  +   Y+ +  +++ +  Y  M        N+++P VLRAC+ L     G  +H 
Sbjct: 61  VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I CG + +  +  S++  Y + G    AR VF++M  RD+ SW+S+I+ Y  N     
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +++ + M  +G EPD VT  +L +A                                  
Sbjct: 181 AVELLNCMRLDGFEPDVVTWNTLMDA---------------------------------- 206

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNL 297
            Y + G    A     +IE+    SWT +IS Y++ G    +L  F  M+ ++E   P+L
Sbjct: 207 -YCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMI-IREVVSPDL 264

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE-------YDYLGPALIEFYAECGKMS 350
             L +VL SC  +G LR GK +H      G G +       Y   G AL+  YA+CG++ 
Sbjct: 265 DCLCSVLVSCRHIGALRSGKEIH------GYGTKMETNTVFYSSAGAALLTMYAKCGRIQ 318

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +   V   + + +I++WN +I  +    + K+A+E   +MQ   +  D  ++++ L  C 
Sbjct: 319 DAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVC- 377

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
               LQ G  IH +V K       V   +++I MY KCG    AY +F  +  K VV WN
Sbjct: 378 ---DLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWN 434

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           +MI GF  +G+   A+ L  +M L+ +  +  TF + + ACS+ G +++G          
Sbjct: 435 TMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGF--------- 485

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-----WSAMIDCYGMHGQLND 583
                                     R+F SM+E   ++     +S ++D     GQ  D
Sbjct: 486 --------------------------RLFRSMTEDYSITPRMEHYSCIVDMLARAGQFAD 519

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ-HYACMV 642
           A +   +M    ++P++  +  +L AC    +++ G+    A ++  +EP    HY  + 
Sbjct: 520 AVTFIHKM---PLEPDKSIWGALLAACRAYQNLDFGR--LAAEQLIRMEPKCAGHYVTLS 574

Query: 643 DLLSRSGDIEGA 654
           ++ +R+G  + A
Sbjct: 575 NIYARAGRWDDA 586


>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
          Length = 596

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 183/502 (36%), Positives = 280/502 (55%), Gaps = 13/502 (2%)

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y + G L  A + F  I      SW  +++ ++++  F   L+ F +ML+  +  +   L
Sbjct: 6   YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 65

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +  + +C GL   +  K  H   I+  +  +  Y+ PAL+  Y E G + E  KV   + 
Sbjct: 66  VFAVKACFGLSLFQGAKLFHSLAIKLRLEGD-PYVAPALMNVYTELGSLEEAHKVFEEVP 124

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +N + W ++I  Y          EL  +M+  G   D F V   + ACGNV + + G  
Sbjct: 125 LKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKT 184

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
            HG          +  S  +  Y   GF + A  LFE I  + VV+W+++I GF +NG +
Sbjct: 185 FHGL---------YFSSGYV--YEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRA 233

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
           LE+I++F QM  + +  + VTF + + ACS++G L++G+ VH  +I  GV  D+   T+ 
Sbjct: 234 LESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSF 293

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
            DMYAKCG + TA RVF  + E+NV SWS MI+ +GMHG   +A +LF +M      PN 
Sbjct: 294 IDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNS 353

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
           VTF+++L ACSHSG +EEG  +F +M R +G+ P  +HYACMVDLL R+G I+ A   I+
Sbjct: 354 VTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFIN 413

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
           +MP     S WGALL  CRIH+R ++ + + K+L    ++ +G Y +LSNIYA+ G W+ 
Sbjct: 414 NMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEM 473

Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
             K R  M   GL K+ G+++I
Sbjct: 474 VKKTRLKMCEKGLLKIVGFTSI 495



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 234/465 (50%), Gaps = 26/465 (5%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           I   Y + G L  A K F+ +T  ++ SW++I+AS+  N    + L++F  M++EG   D
Sbjct: 2   IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 61

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
              ++   +AC  L   + A+  H   ++ +++ D  +  + + +Y++ G L  A + F 
Sbjct: 62  SFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFE 121

Query: 256 KIEKRCTTSWTAMISCY-NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
           ++  + +  W  MI  Y N S  F    E F +M     E +   +  ++ +C  +   +
Sbjct: 122 EVPLKNSVIWGVMIKGYLNFSEEF-GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGK 180

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           EGK+ H      G               Y   G +     +   I  RB++ W+ +I+ +
Sbjct: 181 EGKTFHGLYFSSGY-------------VYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGF 227

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK----IDC 430
           AR G + E++ +  QM    + P+S + AS + AC ++GSL+ G  +HG++I+    +D 
Sbjct: 228 ARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDV 287

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           K+    +S IDMY+KCG    AY +F +I +K+V  W++MI GF  +G   EA+NLF++M
Sbjct: 288 KN---YTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEM 344

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCG 548
                  + VTF++ + ACS+ G++E+G W H K +S  YG+         + D+  + G
Sbjct: 345 RSVNQLPNSVTFVSVLSACSHSGRIEEG-WSHFKSMSRDYGITPVEEHYACMVDLLGRAG 403

Query: 549 DLQTAQRVFDSM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
            +  A    ++M +E    +W A++    +H +   A  + K++L
Sbjct: 404 KIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLL 448



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 193/384 (50%), Gaps = 22/384 (5%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H+  +   L  DP  +  L+  Y E+GSL  +  VF+     +S +W V+IK Y+  NF
Sbjct: 84  FHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGYL--NF 141

Query: 76  FEE--SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            EE     L+ +M R    +  F+   +++AC ++     G+  HG     G+       
Sbjct: 142 SEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLYFSSGY------- 194

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
                 Y   G LD A  +F+ +  RBVV WS+IIA +  N    E + MF  M+ + V 
Sbjct: 195 -----VYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQMLADSVT 249

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+ VT  S+  AC  L SL+  RS+HG+++R  +++D     SFI MY+KCG +++A R 
Sbjct: 250 PNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRV 309

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +I ++   SW+ MI+ +   G   +AL  F +M  V + PN +T ++VL +C+  G +
Sbjct: 310 FCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRI 369

Query: 314 REGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERNILSWNMLI 371
            EG S    + R  G+ P  ++    +++     GK+ E    I+ +  E    +W  L+
Sbjct: 370 EEGWSHFKSMSRDYGITPVEEHYA-CMVDLLGRAGKIDEALSFINNMPTEPGASAWGALL 428

Query: 372 SE---YARKGMSKEALELLVQMQT 392
                + R  +++E  + L+ +++
Sbjct: 429 GACRIHRRAELAEEVAKKLLPLES 452



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 190/382 (49%), Gaps = 15/382 (3%)

Query: 38  SYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI 97
           +Y ++GSL  +   F+     +   W  ++  +  N  F + + L+ +M++E   + +F 
Sbjct: 5   AYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFN 64

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
               ++AC  L      +  H   IK   + D  +  +++  Y E G L++A KVF+++ 
Sbjct: 65  LVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVP 124

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            ++ V W  +I  Y + ++     ++F  M R G E D   +  L +ACG + + +  ++
Sbjct: 125 LKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKT 184

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
            HG            L  S   +Y   G L  A   F  I  R    W+A+I+ + R+G 
Sbjct: 185 FHG------------LYFSSGYVYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGR 232

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG- 336
             +++  F +ML     PN +T  +++ +C+ LG L++G+SVH  +IR G+  E D    
Sbjct: 233 ALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGV--ELDVKNY 290

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            + I+ YA+CG +    +V   I E+N+ SW+ +I+ +   G+  EAL L  +M++   +
Sbjct: 291 TSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQL 350

Query: 397 PDSFSVASSLSACGNVGSLQLG 418
           P+S +  S LSAC + G ++ G
Sbjct: 351 PNSVTFVSVLSACSHSGRIEEG 372



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 54/109 (49%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S  +L++   +H +++  G+  D    T  I+ YA+ G + ++  VF    E + F W+ 
Sbjct: 264 SLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWST 323

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
           +I  +  +    E++ L+++M       ++  + SVL ACS  G +  G
Sbjct: 324 MINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 372


>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
 gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 178/525 (33%), Positives = 298/525 (56%), Gaps = 4/525 (0%)

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH    ++ I  D  +    + MY++CG++ +A++ F +I+ R   +W+A+I+ + +SG+
Sbjct: 10  IHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGY 69

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            Q+AL  F  M     + N + L++ L +CA +  L+ GKS+HC  ++  +  +   +G 
Sbjct: 70  PQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDIS-VGT 128

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL+  YA+CG  +    + + +  +++++WN +I+ YA+ G    ALE+  ++Q   L P
Sbjct: 129 ALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNP 188

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLF 456
           +S ++   L A   +  L  G  IHG +IK   + E  V+++LIDMY+KCG  + A  LF
Sbjct: 189 NSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLF 248

Query: 457 ERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
            R   +K  V WN MI G+  +G++++A + F QM L  ++ + VT +T + A +++  L
Sbjct: 249 HRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSAL 308

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
             G  +H  +I  G +    +   L DMYAKCG L  ++++F  M  ++ VSW+ M+  Y
Sbjct: 309 RAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGY 368

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPD 634
            +HG+ + A  LF +M DS I+ +  +F+N+L AC H+G + EG+  F++M +   +EPD
Sbjct: 369 AVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPD 428

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           L+HYACM DLL R+G       +I SMP   +  +WGALL    +H  + + +     L 
Sbjct: 429 LEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLD 488

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
                +  +Y  LSN YA  G W + G  RS +  TGL+K PGYS
Sbjct: 489 KLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYS 533



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 279/546 (51%), Gaps = 47/546 (8%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           LG G ++H    + G D D  + T I+  Y   G +D A+++F ++  RD+V+WS+IIA+
Sbjct: 4   LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAA 63

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +  +    E L +F SM  EG++ + V +LS   AC E+ SL+  +S+H   ++  + +D
Sbjct: 64  FVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLD 123

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             +G + + MY+KCG    A   F ++  +   +W AMI+ Y + G    ALE F K+  
Sbjct: 124 ISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQL 183

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
            +  PN  T++ +L + A L  L +G  +H +II+ G   E  ++  ALI+ YA+CG +S
Sbjct: 184 SELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESEC-HVKTALIDMYAKCGSLS 242

Query: 351 ECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
             E + H  G  ++ +SWN++I+ Y   G + +A     QM+   + P+  ++ + L A 
Sbjct: 243 GAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAV 302

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            ++ +L+ G+ +H +VI++  + +  V + LIDMY+KCG+ + +  +F  ++ K  V WN
Sbjct: 303 AHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWN 362

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
            M+ G+  +G    AI LF +M  + + +D  +F+  + AC + G + +G+         
Sbjct: 363 VMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGR--------- 413

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-----ERNVVSWSAMIDCYGMHGQLND 583
                                     ++FDSMS     E ++  ++ M D  G  G  N+
Sbjct: 414 --------------------------KIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNE 447

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
              L K M    ++P+   +  +L A +   +V+  +F  + +       +L HYA + +
Sbjct: 448 VLDLIKSM---PMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLE-HKNLTHYAALSN 503

Query: 644 LLSRSG 649
             +RSG
Sbjct: 504 TYARSG 509



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 257/532 (48%), Gaps = 16/532 (3%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L + T +H      G+  D   +T ++  YA  G + +++ +F   K  D   W+ +I  
Sbjct: 4   LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAA 63

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           ++ + + +E++ L+  M  E    +  I  S L AC+ +  L  G+ +H   +K   D D
Sbjct: 64  FVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLD 123

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             + T+++  Y + G    A  +F++M  +DVV+W+++I  Y    +    L+MFH +  
Sbjct: 124 ISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQL 183

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             + P+  TM+ L  A   L  L     IHG +++   + +  +  + I MY+KCG L  
Sbjct: 184 SELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSG 243

Query: 250 AERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           AE  F +   ++   SW  MI+ Y  SG    A  +F +M     +PN++T++TVL + A
Sbjct: 244 AEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVA 303

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L  LR G ++H  +IR G   +   +G  LI+ YA+CG +   EK+ H +  ++ +SWN
Sbjct: 304 HLSALRAGMTLHAYVIRMGFQSKTP-VGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWN 362

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
           ++++ YA  G    A+EL  +MQ   +  DSFS  + LSAC + G +  G +I   + K 
Sbjct: 363 VMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQ 422

Query: 429 DCKDEFVQ--SSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
              +  ++  + + D+  + G F  +  L+     +    +W +++     + N   A  
Sbjct: 423 HQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEF 482

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW-----VHHKLISYGVRK 532
             H  +L+ LE   +T   A+   SN      G+W        K+   G+RK
Sbjct: 483 ALH--HLDKLEHKNLTHYAAL---SNT-YARSGRWADVGNTRSKITKTGLRK 528



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 138/265 (52%), Gaps = 3/265 (1%)

Query: 414 SLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           +L  G +IH    +  ID  D  V + ++ MY++CG  + A  LF+ I+ + +V W+++I
Sbjct: 3   ALGRGTEIHDFARQQGID-SDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAII 61

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
             F Q+G   EA++LF  M    L+ ++V  L+++ AC+ +  L+ GK +H   +   V 
Sbjct: 62  AAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD 121

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            DI + TAL  MYAKCG    A  +F+ M  ++VV+W+AMI+ Y   G+   A  +F ++
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL 181

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
             S + PN  T + +L A +    +++G      +   G E +      ++D+ ++ G +
Sbjct: 182 QLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSL 241

Query: 652 EGAFKMIHSMPFPANGSIWGALLNG 676
            GA  + H      +   W  ++ G
Sbjct: 242 SGAEFLFHRTGCRKDEVSWNVMIAG 266



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 1/207 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD-TFKEPD 59
           +P F    +L + + +H  ++  G   +    T LI+ YA+ GSL  +  +F  T    D
Sbjct: 197 LPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKD 256

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W V+I  YM +    ++   + +M  E    +     +VL A + L  L +G  +H 
Sbjct: 257 EVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHA 316

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+ GF     +   ++  Y + G LD + K+F +M ++D VSW+ ++A Y  +   S 
Sbjct: 317 YVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSC 376

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEAC 206
            +++F  M    +  D  + +++  AC
Sbjct: 377 AIELFSRMQDSEIRLDSFSFINVLSAC 403



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 55/117 (47%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P     + LR    LHA+++  G     P    LI+ YA+ G L  S  +F   K  D+
Sbjct: 299 LPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDT 358

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             W V++  Y  +     +I L+ +M   +  + +F + +VL AC   G +G G K+
Sbjct: 359 VSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKI 415


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 180/513 (35%), Positives = 290/513 (56%), Gaps = 40/513 (7%)

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +    + +Y+  GD+  +  TF +I ++   +W +MIS Y  +G F +A+  F ++L V 
Sbjct: 53  ISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVS 112

Query: 293 E-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMS 350
           E  P+  T   VL +C   G L +G+ +HC   +  +G +++ ++  +LI  Y+  G   
Sbjct: 113 EIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFK--LGFQWNVFVAASLIHMYSRFGFTG 167

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               +   +  R++ SWN +IS   + G + +AL++L +M+  G+  +  +V S L    
Sbjct: 168 IARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV-- 225

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
                                        +DMY+K G  + A+ +FE I  K V+ WN++
Sbjct: 226 ----------------------------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTL 257

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEM--DEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           I G+ QNG + EAI ++ +M   C E+  ++ T+++ + A +++G L++G  +H ++I  
Sbjct: 258 ITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT 316

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            +  D+++ T L D+Y KCG L  A  +F  + + + V+W+A+I C+G+HG       LF
Sbjct: 317 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLF 376

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRS 648
            +MLD G+KP+ VTF+++L ACSHSG VEEGK+ F  M+ +G++P L+HY CMVDLL R+
Sbjct: 377 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRA 436

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G +E A+  I  MP   + SIWGALL  CRIH  I++ K     L    + + GYY LLS
Sbjct: 437 GYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLS 496

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           NIYA  G W+   KVRS+    GLKK PG+STI
Sbjct: 497 NIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 529



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 237/486 (48%), Gaps = 49/486 (10%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF S T       LHA L+V G       STRL+  YA +G +  SR  FD   + D + 
Sbjct: 25  LFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYA 84

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I  Y+ N  F E+I  +++++       +F  +P VL+AC +L D   G K+H   
Sbjct: 85  WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWA 141

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            K GF  +  +  S++  Y  FG    AR +FD M  RD+ SW+++I+    N + ++ L
Sbjct: 142 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 201

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +   M  EG++ +FVT++S+                                  F+ MY
Sbjct: 202 DVLDEMRLEGIKMNFVTVVSILPV-------------------------------FVDMY 230

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITL 300
           +K G L SA + F  I  +   SW  +I+ Y ++G   +A+E +  M E KE  PN  T 
Sbjct: 231 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 290

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L + A +G L++G  +H ++I+  +  +  ++   LI+ Y +CG++ +   + + + 
Sbjct: 291 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDV-FVATCLIDVYGKCGRLVDAMSLFYQVP 349

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG-- 418
           + + ++WN +IS +   G +++ L+L  +M   G+ PD  +  S LSAC + G ++ G  
Sbjct: 350 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 409

Query: 419 ----LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
               +Q +G  IK   K       ++D+  + G+  +AY   + +  Q    +W +++  
Sbjct: 410 CFRLMQEYG--IKPSLKH---YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 464

Query: 474 FYQNGN 479
              +GN
Sbjct: 465 CRIHGN 470



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 189/447 (42%), Gaps = 67/447 (14%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C  L    ++H      G  ++   +  LI  Y+  G    +R +FD     D  
Sbjct: 123 PVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 182

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I   + N    +++ +  +M R +    NF+  +V+       D+          
Sbjct: 183 SWNAMISGLIQNGNAAQALDVLDEM-RLEGIKMNFV--TVVSILPVFVDM---------- 229

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
                             Y + G LD A KVF+ +  +DV+SW+++I  Y  N   SE +
Sbjct: 230 ------------------YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAI 271

Query: 182 KMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +++  M   + + P+  T +S+  A   + +L+    IHG V++  + +D  +    I +
Sbjct: 272 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDV 331

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG L+ A   F ++ +  + +W A+ISC+   G  +K L+ F +ML+   +P+ +T 
Sbjct: 332 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 391

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L +C+  G++ EGK     +   G+ P   + G                        
Sbjct: 392 VSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG------------------------ 427

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
                    ++    R G  + A + +  M    L PD+    + L AC   G+++LG  
Sbjct: 428 --------CMVDLLGRAGYLEMAYDFIKDMP---LQPDASIWGALLGACRIHGNIELGKF 476

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCG 447
               + ++D K+      L ++Y+  G
Sbjct: 477 ASDRLFEVDSKNVGYYVLLSNIYANVG 503



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 4/175 (2%)

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL- 492
           F+ + L+++Y+  G  +L+   F++I QK V  WNSMI  +  NG+  EAI  F+Q+ L 
Sbjct: 52  FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLV 111

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
           + +  D  TF   ++AC   G L  G+ +H      G + ++++  +L  MY++ G    
Sbjct: 112 SEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 168

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           A+ +FD M  R++ SW+AMI     +G    A  +  +M   GIK N VT ++IL
Sbjct: 169 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL 223



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 15/231 (6%)

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
            K +H  L+  G  + I+I T L ++YA  GD+  ++  FD + +++V +W++MI  Y  
Sbjct: 35  AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 578 HGQLNDAASLFKQ-MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
           +G  ++A   F Q +L S I+P+  TF  +L AC   G++ +G+         G + ++ 
Sbjct: 95  NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 151

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
             A ++ + SR G    A  +   MPF   GS W A+++G   +        +  E+ + 
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGS-WNAMISGLIQNGNAAQALDVLDEMRLE 210

Query: 697 GTNDNGYYTLLS------NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G   N + T++S      ++YA+ G  D   KV    E+  +K V  ++T+
Sbjct: 211 GIKMN-FVTVVSILPVFVDMYAKLGLLDSAHKV---FEIIPVKDVISWNTL 257



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  ++H  ++ T LH D   +T LI+ Y + G L  +  +F    +  S
Sbjct: 294 LPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 353

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
             W  +I C+  +   E+++ L+ +M+ E     +  + S+L ACS  G +  G+
Sbjct: 354 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 408


>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
          Length = 688

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 311/619 (50%), Gaps = 86/619 (13%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           LA+      SL  AR+ HG VL+  +  +  L N+ +  Y++ G L  A R F  I  R 
Sbjct: 23  LADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRN 82

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP-------------------------- 295
           T S+ A++S Y R G   +A   F    E   +P                          
Sbjct: 83  TFSYNALLSAYARLGRPDEARALF----EAIPDPDQCSYNAVVAALARHGRGHAGDALRF 138

Query: 296 -----------NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD--YLGPALIEF 342
                      N  +  + L +CA    LR G+ VH  + R    P  D  ++G AL++ 
Sbjct: 139 LAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARS---PHADDVHIGTALVDM 195

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           YA+C +  +  +V  A+ ERN++SWN LI+ Y + G   EAL L V+M   G  PD  ++
Sbjct: 196 YAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTL 255

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFV-QSSLIDMYSKCG--------FKNL- 451
           +S +SAC  + + + G Q+H H++K D  +D+ V  ++L+DMY+KCG        F ++ 
Sbjct: 256 SSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315

Query: 452 ----------------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
                                 A ++F ++ +K+V+ WN +I  + QNG   EAI LF Q
Sbjct: 316 SRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ 375

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR------KDIYIDTALTDM 543
           +  + +     T+   + AC NI  L+ G+  H  ++  G R       D+++  +L DM
Sbjct: 376 LKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDM 435

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y K G +    +VF+ M+ R+ VSW+AMI  Y  +G+  DA  LF++ML S   P+ VT 
Sbjct: 436 YLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTM 495

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + +L AC HSG V+EG+ +F+ M    G+ P   HY CMVDLL R+G ++ A ++I  MP
Sbjct: 496 IGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMP 555

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              +  +W +LL  CR+HK +++ +     L      ++G Y LLSN+YAE G W +  +
Sbjct: 556 TEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFR 615

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           VR  M+  G+ K PG S I
Sbjct: 616 VRRSMKDRGVSKQPGCSWI 634



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 267/557 (47%), Gaps = 80/557 (14%)

Query: 102 LRACSSLGDL-------GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           LRA S L DL             HG ++K     +  +  +++ TY   G L +AR+VFD
Sbjct: 17  LRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFD 76

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHS---------------MVREGV------- 192
            +  R+  S+++++++Y       E   +F +               + R G        
Sbjct: 77  GIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDAL 136

Query: 193 -------EPDFV----TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
                    DFV    +  S   AC     LR    +HG V R     D  +G + + MY
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMY 196

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KC   + A R F  + +R   SW ++I+CY ++G   +AL  FV+M+     P+ +TL 
Sbjct: 197 AKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLS 256

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK------------- 348
           +V+ +CAGL   REG+ VH  ++++    +   L  AL++ YA+CG+             
Sbjct: 257 SVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316

Query: 349 ------------------MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
                             + + + V   + E+N+++WN+LI+ YA+ G  +EA+ L VQ+
Sbjct: 317 RSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-------DEFVQSSLIDMY 443
           +   + P  ++  + L+ACGN+  LQLG Q H HV+K   +       D FV +SL+DMY
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
            K G  +    +FER+  +  V WN+MI G+ QNG + +A++LF +M  +    D VT +
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMI 496

Query: 504 TAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-S 561
             + AC + G +++G+   H +   +G+       T + D+  + G L+ A+ +   M +
Sbjct: 497 GVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPT 556

Query: 562 ERNVVSWSAMIDCYGMH 578
           E + V W++++    +H
Sbjct: 557 EPDSVLWASLLGACRLH 573



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 240/490 (48%), Gaps = 50/490 (10%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPD--SFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           L+ +YA +G    +R +F+   +PD  S+   V            +++     M  +   
Sbjct: 89  LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFV 148

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
           ++ + + S L AC++  DL +GE+VHG + +     D  I T+++  Y +     DAR+V
Sbjct: 149 LNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRV 208

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           FD M  R+VVSW+S+I  Y  N  V E L +F  M+  G  PD VT+ S+  AC  L + 
Sbjct: 209 FDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAE 268

Query: 213 RPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCG-------------------------- 245
           R  R +H H+++R +++ D  L N+ + MY+KCG                          
Sbjct: 269 REGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 328

Query: 246 -----DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
                ++  A+  F ++ ++   +W  +I+ Y ++G  ++A+  FV++      P   T 
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKG----MGPEYD-YLGPALIEFYAECGKMSECEKV 355
             VL +C  +  L+ G+  H  ++++G     GPE D ++G +L++ Y + G + +  KV
Sbjct: 389 GNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 448

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  R+ +SWN +I  YA+ G +K+AL L  +M      PDS ++   LSACG+ G +
Sbjct: 449 FERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLV 508

Query: 416 QLGLQIHGHVIKID-----CKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNS 469
             G + H H +  D      +D +  + ++D+  + G  K    L+ +   +   V+W S
Sbjct: 509 DEGRR-HFHFMTEDHGITPSRDHY--TCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWAS 565

Query: 470 MI--CGFYQN 477
           ++  C  ++N
Sbjct: 566 LLGACRLHKN 575



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 210/478 (43%), Gaps = 74/478 (15%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +LR   ++H  +  +    D    T L++ YA+      +R VFD   E +   W  LI 
Sbjct: 166 DLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLIT 225

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
           CY  N    E+++L+ +M+            SV+ AC+ L     G +VH  ++K    +
Sbjct: 226 CYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLR 285

Query: 129 DDVI--------------------------------QTSILCTYGEFGCLDDARKVFDKM 156
           DD++                                +TSIL  Y +   ++DA+ VF +M
Sbjct: 286 DDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQM 345

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             ++V++W+ +IA+Y  N +  E +++F  + R+ + P   T  ++  ACG +  L+  +
Sbjct: 346 VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQ 405

Query: 217 SIHGHVLRRKIKID-GP-----LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
             H HVL+   + D GP     +GNS + MY K G +    + F ++  R   SW AMI 
Sbjct: 406 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 465

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS-VHCQIIRKGMG 329
            Y ++G  + AL  F +ML   E P+ +T+I VL +C   G + EG+   H      G+ 
Sbjct: 466 GYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGIT 525

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
           P  D+                                +  ++    R G  KEA EL+  
Sbjct: 526 PSRDH--------------------------------YTCMVDLLGRAGHLKEAEELIKD 553

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
           M T    PDS   AS L AC    +++LG +  G + ++D ++      L +MY++ G
Sbjct: 554 MPT---EPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMG 608



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 41/340 (12%)

Query: 31  ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQ 90
           + T ++  YA+  ++  +++VF    E +   W VLI  Y  N   EE+I L+ ++ R+ 
Sbjct: 321 SETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDS 380

Query: 91  ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF------DKDDVIQTSILCTYGEFG 144
              +++ Y +VL AC ++  L  G++ H  ++K GF      + D  +  S++  Y + G
Sbjct: 381 IWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 440

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
            +DD  KVF++M +RD VSW+++I  Y  N    + L +F  M+     PD VTM+ +  
Sbjct: 441 SIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLS 500

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
           ACG    +   R                    F  M    G   S +             
Sbjct: 501 ACGHSGLVDEGR------------------RHFHFMTEDHGITPSRDH------------ 530

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           +T M+    R+G  ++A E  +K  ++  EP+ +   ++LG+C     +  G+    ++ 
Sbjct: 531 YTCMVDLLGRAGHLKEA-EELIK--DMPTEPDSVLWASLLGACRLHKNVELGERTAGRLF 587

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
              + PE       L   YAE GK ++  +V  ++ +R +
Sbjct: 588 E--LDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGV 625


>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 762

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/624 (31%), Positives = 328/624 (52%), Gaps = 11/624 (1%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
            G   D  A   +I +Y  +G L  +  +F     P+   W V+I  +       +SI L
Sbjct: 113 VGREPDQVAFVTVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIEL 172

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +  M +     +     SVL A +SL DL  G  VH   IK G D +  + +S++  Y +
Sbjct: 173 FCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAK 232

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
              L+ A+KVFD +  R+VV W++++  Y  N    E +++  +M   G  PD  T  S+
Sbjct: 233 CKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSI 292

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
             AC  L  +   R +H  +++ K   +  +GN+ I MY+K G L  A + F  ++ R  
Sbjct: 293 LSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDN 352

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW A+I  Y +     +A   F KM  V   P+ ++L ++L +CA +    +GK +HC 
Sbjct: 353 VSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCL 412

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            ++ G+     Y G +LI+ YA+CG +   +K++ ++ E +++S N LI+ YA   + +E
Sbjct: 413 SVKSGLETSL-YAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNL-EE 470

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLI 440
           A+ L  +MQ  GL P   + AS L  CG    L LG+QIH  ++K  +   D+F+  SL+
Sbjct: 471 AIILFEKMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLL 530

Query: 441 DMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
            MY K   K  A +LF      KS ++W +MI G  QN  S EA+  + +M       D+
Sbjct: 531 GMYVKSLRKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQ 590

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            TF++ ++AC+ +  +  G+ +H  +   G+  D    +AL DMYAKCGD++++ +VF+ 
Sbjct: 591 ATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFED 650

Query: 560 MSERN-VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           M  +N V+SW++MI  +  +G   +A  +F +M  + + P++VTF+ +L ACSH+G V E
Sbjct: 651 MHSKNDVISWNSMIVGFAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSE 710

Query: 619 GKFYFNAMRIFGVEPDLQHYACMV 642
           G+  F+    F   P     AC+V
Sbjct: 711 GRQIFDMKPSFVTAP-----ACLV 729



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 167/518 (32%), Positives = 267/518 (51%), Gaps = 38/518 (7%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           + F +  VL  C+ L  +  G  VH  ++K GF+       +++  Y +   + D R+VF
Sbjct: 17  NEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVF 76

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D   S D VSW+S+IA Y       E L++F  M + G EPD V  +++  A        
Sbjct: 77  DGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINA-------- 128

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
                                      Y   G L  A   F ++      +W  MIS + 
Sbjct: 129 ---------------------------YVALGRLDDALGLFFQMPNPNVVAWNVMISGHA 161

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G   K++E F  M +   +    TL +VL + A L  L  G  VH + I++G+     
Sbjct: 162 QRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNV- 220

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           Y+G +LI  YA+C ++   +KV   I ERN++ WN ++  YA+ G + E +ELL  M++ 
Sbjct: 221 YVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSC 280

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLA 452
           G  PD F+  S LSAC  +  ++ G Q+H  +IK     + FV ++LIDMY+K GF   A
Sbjct: 281 GFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDA 340

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
              FE ++ +  V WN++I G+ Q  + +EA  +F +M+L  +  DEV+  + + AC+N+
Sbjct: 341 RKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANV 400

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
              E+GK +H   +  G+   +Y  ++L DMYAKCGD+ +AQ++  SM E +VVS +A+I
Sbjct: 401 EGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALI 460

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             Y     L +A  LF++M   G+ P+E+TF ++L  C
Sbjct: 461 AGYA-PVNLEEAIILFEKMQAEGLNPSEITFASLLDGC 497



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/545 (30%), Positives = 275/545 (50%), Gaps = 5/545 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S T+L     +HA  +  GL  +    + LI  YA+   L +++ VFD   E +  +W  
Sbjct: 197 SLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNA 256

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           ++  Y  N +  E I L   M         F Y S+L AC+ L  +  G ++H  IIK  
Sbjct: 257 MVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNK 316

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  +  +  +++  Y + G L+DARK F+ M SRD VSW++II  Y    D  E   MF 
Sbjct: 317 FASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQ 376

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G+ PD V++ S+  AC  +      + IH   ++  ++     G+S I MY+KCG
Sbjct: 377 KMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCG 436

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           D+ SA++    + +    S  A+I+ Y      ++A+  F KM      P+ IT  ++L 
Sbjct: 437 DVGSAQKILKSMPEHSVVSINALIAGYAPVN-LEEAIILFEKMQAEGLNPSEITFASLLD 495

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNI 364
            C G   L  G  +HC I+++G+  + D+LG +L+  Y +  + ++   +       ++ 
Sbjct: 496 GCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKST 555

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           + W  +IS  A+   S EAL+   +M++   +PD  +  S L AC  + S+  G +IH  
Sbjct: 556 ILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSL 615

Query: 425 VIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLE 482
           + +     DE   S+LIDMY+KCG    +  +FE +  K+ V+ WNSMI GF +NG +  
Sbjct: 616 IFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAEN 675

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI-DTALT 541
           A+ +F++M    +  D+VTFL  + ACS+ G++ +G+ +     S+       + +  LT
Sbjct: 676 ALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIFDMKPSFVTAPACLVREEVLT 735

Query: 542 DMYAK 546
             YAK
Sbjct: 736 KAYAK 740



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 170/664 (25%), Positives = 317/664 (47%), Gaps = 40/664 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H +++  G  +       LI+ YA+   +   R VFD     D+  W  LI  Y+    
Sbjct: 40  VHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGL 99

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE++ ++ +M                                    K G + D V   +
Sbjct: 100 PEEALEVFEQMK-----------------------------------KVGREPDQVAFVT 124

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y   G LDDA  +F +M + +VV+W+ +I+ +      ++ +++F +M + G++  
Sbjct: 125 VINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKST 184

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ S+  A   L  L     +H   +++ +  +  +G+S I MY+KC +L +A++ F 
Sbjct: 185 RSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFD 244

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            I++R    W AM+  Y ++G+  + +E    M      P+  T  ++L +CA L  +  
Sbjct: 245 PIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEG 304

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ +H  II+        ++G ALI+ YA+ G + +  K    +  R+ +SWN +I  Y 
Sbjct: 305 GRQLHSIIIKNKFASNL-FVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYV 363

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
           ++    EA  +  +M   G++PD  S+AS LSAC NV   + G  IH   +K   +   +
Sbjct: 364 QEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLY 423

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
             SSLIDMY+KCG    A  + + + + SVV  N++I G Y   N  EAI LF +M    
Sbjct: 424 AGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAG-YAPVNLEEAIILFEKMQAEG 482

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR-KDIYIDTALTDMYAKCGDLQTA 553
           L   E+TF + +  C    QL  G  +H  ++  G++  D ++  +L  MY K      A
Sbjct: 483 LNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDA 542

Query: 554 QRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           + +F   S  ++ + W+AMI     +   ++A   +++M      P++ TF+++L AC+ 
Sbjct: 543 RILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAV 602

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
             S+ +G+   + +   G++ D    + ++D+ ++ GD+  + ++   M    +   W +
Sbjct: 603 LSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNS 662

Query: 673 LLNG 676
           ++ G
Sbjct: 663 MIVG 666



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 189/383 (49%), Gaps = 38/383 (9%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY-DYLGPALIEFYAECGKMSECE 353
           PN  T   VL  CA L  +  G+ VHC +++  +G E+  +   ALI+ YA+  +MS+C 
Sbjct: 16  PNEFTFAIVLSGCARLDSVEFGRLVHCNVVK--LGFEFSSFCVGALIDMYAKNNRMSDCR 73

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +V       + +SW  LI+ Y + G+ +EALE+  QM+  G  PD  +            
Sbjct: 74  RVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVA------------ 121

Query: 414 SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
                               FV  ++I+ Y   G  + A  LF ++   +VV WN MI G
Sbjct: 122 --------------------FV--TVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISG 159

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             Q G+  ++I LF  M    ++    T  + + A +++  L+ G  VH + I  G+  +
Sbjct: 160 HAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSN 219

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           +Y+ ++L +MYAKC +L+ A++VFD + ERNVV W+AM+  Y  +G  ++   L   M  
Sbjct: 220 VYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKS 279

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            G  P+E T+ +IL AC+    VE G+   + +       +L     ++D+ ++SG +E 
Sbjct: 280 CGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLED 339

Query: 654 AFKMIHSMPFPANGSIWGALLNG 676
           A K    M    N S W A++ G
Sbjct: 340 ARKQFELMKSRDNVS-WNAIIVG 361



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 37/284 (13%)

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           G+ P+ F+ A  LS C  + S++ G  +H +V+K+  +   F   +LIDMY+K    +  
Sbjct: 13  GMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDC 72

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+       V W S+I G+ + G   EA+ +F QM     E D+V F+T I A    
Sbjct: 73  RRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINA---- 128

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
                                          Y   G L  A  +F  M   NVV+W+ MI
Sbjct: 129 -------------------------------YVALGRLDDALGLFFQMPNPNVVAWNVMI 157

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             +   G    +  LF  M  +GIK    T  ++L A +    ++ G          G++
Sbjct: 158 SGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLD 217

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            ++   + ++++ ++  ++E A K+   +    N  +W A++ G
Sbjct: 218 SNVYVGSSLINMYAKCKELEAAKKVFDPID-ERNVVLWNAMVGG 260



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 8/220 (3%)

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           +E TF   +  C+ +  +E G+ VH  ++  G     +   AL DMYAK   +   +RVF
Sbjct: 17  NEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVF 76

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D     + VSW+++I  Y   G   +A  +F+QM   G +P++V F+ ++ A    G ++
Sbjct: 77  DGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVALGRLD 136

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP---FPANGSIWGALL 674
           +    F  M      P++  +  M+   ++ G    + ++  +M      +  S  G++L
Sbjct: 137 DALGLFFQMP----NPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVL 192

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAE 713
           +       +D    +  E    G + N Y  + L N+YA+
Sbjct: 193 SAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAK 232


>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 212/725 (29%), Positives = 366/725 (50%), Gaps = 101/725 (13%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCG--FDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           +Y  +L+ C     L +G ++H +I+K G  F  ++ I+T ++  Y +    + +  +F 
Sbjct: 12  VYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFR 71

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           ++  ++V SW+++I          E L  F  M   G+ PD   + ++ +ACG L  +R 
Sbjct: 72  RVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRI 131

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL------LSAERTFVKIEKRCTTSWTAM 268
            + +HG V                     CG +         ++    + +R   +W +M
Sbjct: 132 GKVVHGLV--------------------SCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSM 171

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I  Y ++G  ++A+E F +M E   EP  +TL + L + A LG L++GK  H   +  G+
Sbjct: 172 IVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGI 231

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
               + LG +LI FY++ G + + E V   + E+++++WN+LIS Y + G   +AL +  
Sbjct: 232 EMTTN-LGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCH 290

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---------------------- 426
            M+   L  DS ++A+ +SA  ++ +L+LG + H + I                      
Sbjct: 291 LMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCE 350

Query: 427 KIDC----------KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV----VMWNSMIC 472
           KI C          KD  + ++++  +++ G    A  LF ++Q +SV    + WNS+I 
Sbjct: 351 KIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLIL 410

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ------------------------- 507
           GF  +G   EA ++F QM    ++ + VT+ T I                          
Sbjct: 411 GFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKP 470

Query: 508 ----------ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
                     AC N+  L+ G+ +H  LI + +   I I T+L DMYAKCGD   A+RVF
Sbjct: 471 NVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVF 530

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D + ++ +  ++AMI  + +HGQ  +A +L++ + + G+KP+ +TF N L+ACSH+  V 
Sbjct: 531 DMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVS 590

Query: 618 EG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EG + + + +    + P ++HY CMV LLSR GD++ AF +I +MP+  +  I G+LL  
Sbjct: 591 EGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAA 650

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR H +I++ + +  +L     +++G Y  +SN YA  G WDE  KVR +M+  GL+K+P
Sbjct: 651 CREHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIP 710

Query: 737 GYSTI 741
           G S I
Sbjct: 711 GCSWI 715



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 249/506 (49%), Gaps = 34/506 (6%)

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + ++  W  +I  Y+ N   EE+I ++++M  E    +     S L A ++LG L  G++
Sbjct: 162 QRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQ 221

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
            H   + CG +    + +S++  Y + G ++DA  VF +M  +DVV+W+ +I+ Y    +
Sbjct: 222 GHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGE 281

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           V + L M H M  E +  D VT+ +L  A  ++ +L+  +  H + +R  ++ D  + +S
Sbjct: 282 VDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSS 341

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY+KC  +  A R F     +    W  M++ +   G   +AL  F +M      PN
Sbjct: 342 IVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPN 401

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +I+  +++      G + E K +  Q+   G+ P                          
Sbjct: 402 VISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQP-------------------------- 435

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
                 N+++W  LIS  AR G   EA+    +MQ  G+ P+  S+   L AC N+ SLQ
Sbjct: 436 ------NLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQ 489

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           +G  +HG++I+        + +SL+DMY+KCG ++ A  +F+ I  K + ++N+MI GF 
Sbjct: 490 IGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFA 549

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDI 534
            +G ++EA+ L+  +    L+ D +TF  A+ ACS+   + +G  +   ++S + +   I
Sbjct: 550 LHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSI 609

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSM 560
                +  + ++CGDL  A  +  +M
Sbjct: 610 EHYGCMVSLLSRCGDLDEAFGLISAM 635


>gi|302782902|ref|XP_002973224.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
 gi|300158977|gb|EFJ25598.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
          Length = 546

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 176/540 (32%), Positives = 295/540 (54%), Gaps = 5/540 (0%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           EG+ P+ VT L +  AC  L  +   R IH  ++      D  +  + + MYSKC  L  
Sbjct: 4   EGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGD 63

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A++ F  + ++   SWTA+I+ +++ G  + ALE F +M     +PN  T + +L +C  
Sbjct: 64  AKKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTY 123

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           +  L +G  ++ + I  G G +  ++G   +  Y+  G + E +     + E++  SWN 
Sbjct: 124 MDALEDGDKLYKRAISCGYGADV-FVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNA 182

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           ++  Y + G   +A+ L  +M   G  PD+F+    L AC ++G+L+ G +IH  +   D
Sbjct: 183 IVRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHARMG--D 240

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D    S+++ MY+KCG    A   F ++   +VV+WN++I G+ Q  +  EA++L+H 
Sbjct: 241 KPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHA 300

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  LE D  TF + + ACS    L +G+ VH +++S G+   + +   L +M+AKCG 
Sbjct: 301 MNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCGS 360

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A  +F  M+ RN VSW++M+  +  HG+   A  LFK+ML  G +P+E TF +IL  
Sbjct: 361 LTLALEMFRGMASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILNF 420

Query: 610 CSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           CSHSG +++G  ++F+ +  FG+ P  +HY C++DLL R+G I  A KM+    FP +  
Sbjct: 421 CSHSGLLQDGFGYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEH-AFPGSVI 479

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
            W +LL  CR ++ +++     +EL      +      L+N+ AE G WD   +V+ +ME
Sbjct: 480 AWTSLLAACRTYRNVEIAARATEELMRVRPENPAPLVQLANLCAEAGRWDAVERVKRMME 539



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 270/518 (52%), Gaps = 11/518 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L ACS+LGD+ +G K+H R++  G+D D V+ T+IL  Y +   L DA+KVFD +  +D
Sbjct: 16  ILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKVFDSLRRKD 75

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
           VVSW++II ++         L++F  M  +GV+P+  T +++  AC  + +L     ++ 
Sbjct: 76  VVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYK 135

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
             +      D  +G++ + MYS+ G+L+ A+  F  + ++ T SW A++  Y + G   +
Sbjct: 136 RAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQ 195

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPAL 339
           A+  + +M     EP+  T + +LG+C+ LG L EG+ +H +     MG + D L G A+
Sbjct: 196 AISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHAR-----MGDKPDGLAGSAI 250

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           +  YA+CG +         +   N++ WN LI+ Y +    +EAL+L   M   GL  D 
Sbjct: 251 VAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADI 310

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFER 458
           ++ +S L AC     L  G  +H  ++    +    +Q+ L++M++KCG   LA  +F  
Sbjct: 311 YTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCGSLTLALEMFRG 370

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  ++ V WNSM+  F Q+G    A  LF +M L   E  E TF + +  CS+ G L+ G
Sbjct: 371 MASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILNFCSHSGLLQDG 430

Query: 519 KWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
                 ++  +G+         + D+  + G +  A+++ +     +V++W++++     
Sbjct: 431 FGYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEHAFPGSVIAWTSLLAACRT 490

Query: 578 HGQLNDAASLFKQMLDSGIKP-NEVTFMNILWACSHSG 614
           +  +  AA   ++++   ++P N    + +   C+ +G
Sbjct: 491 YRNVEIAARATEELMR--VRPENPAPLVQLANLCAEAG 526



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 233/487 (47%), Gaps = 21/487 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C+NL  +    ++HA ++  G   D   ST ++  Y++   L  ++ VFD+ +  D
Sbjct: 16  ILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKVFDSLRRKD 75

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  +        ++ L+ +M  +    +   + ++L AC+ +  L  G+K++ 
Sbjct: 76  VVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYK 135

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R I CG+  D  + ++ +  Y  FG L +A+  FD +  +   SW++I+ +Y  +  +S+
Sbjct: 136 RAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQ 195

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + ++  M   G EPD  T + L  AC  L +L     IH    R   K DG  G++ + 
Sbjct: 196 AISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVA 252

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  A   F K+       W A+I+ Y +   +Q+AL+ +  M     E ++ T
Sbjct: 253 MYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYT 312

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +VLG+C+G   L EG++VH +I+  G+      L   L+  +A+CG ++   ++   +
Sbjct: 313 FSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVP-LQNGLVNMFAKCGSLTLALEMFRGM 371

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             RN +SWN +++ + + G    A EL  +M   G  P   +  S L+ C + G LQ G 
Sbjct: 372 ASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFTSILNFCSHSGLLQDGF 431

Query: 420 QIHGHVIKIDCKDEFVQSS-------LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI- 471
                    D  DEF  +        +ID+  + G    A  + E     SV+ W S++ 
Sbjct: 432 GYF-----FDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEHAFPGSVIAWTSLLA 486

Query: 472 -CGFYQN 477
            C  Y+N
Sbjct: 487 ACRTYRN 493



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 159/288 (55%), Gaps = 5/288 (1%)

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGF 448
           M   G+ P+S +    L AC N+G ++ G +IH  ++ +    D  V ++++ MYSKC  
Sbjct: 1   MDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEK 60

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  +F+ +++K VV W ++I  F Q G    A+ LF +M L+ ++ +E TF+  + A
Sbjct: 61  LGDAKKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAA 120

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+ +  LE G  ++ + IS G   D+++ +    MY++ G+L  A+  FD + E++  SW
Sbjct: 121 CTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSW 180

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           +A++  Y  HG ++ A SL+K+M   G +P+  T + +L ACS  G++EEG+     M  
Sbjct: 181 NAIVRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHARM-- 238

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            G +PD    + +V + ++ G IE A      M   +N  +W AL+ G
Sbjct: 239 -GDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMS-SSNVVVWNALIAG 284



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 3/215 (1%)

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  +  + VTFL  + ACSN+G +E G+ +H +++  G   D  + TA+  MY+KC  
Sbjct: 1   MDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEK 60

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A++VFDS+  ++VVSW+A+I  +   G+   A  LF +M   G+KPNE TF+NIL A
Sbjct: 61  LGDAKKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAA 120

Query: 610 CSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           C++  ++E+G K Y  A+   G   D+   +  V + SR G++  A      +   + GS
Sbjct: 121 CTYMDALEDGDKLYKRAISC-GYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGS 179

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY 703
            W A++     H  I    ++ KE+ V G   + +
Sbjct: 180 -WNAIVRAYIQHGHISQAISLYKEMDVHGAEPDTF 213


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 188/552 (34%), Positives = 302/552 (54%), Gaps = 16/552 (2%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAERTF------ 254
           L + C  L +L+    IH  +  R   +  P      I++YSK GDL SA   F      
Sbjct: 31  LLQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 255 VKIEKRCTTSW--TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
                +   S+    M+  Y  +G   +A++ ++ M  +    N  T   VL  CA    
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELG 147

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              G+ VH Q++R G G +  ++  AL++ YA+CG++ +  +V   +  R+++ W  +I+
Sbjct: 148 AVFGEVVHGQVVRTGFGSDL-FVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH-VIKIDCK 431
            Y +     +AL L  +MQ  G + D  +  S  SA G +G  ++ + +HG+ V+     
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIG 266

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V +S++ MY+KCG    A L+F+R+++++ + WNSM+ G+ QNG   +A++LF+QM 
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            +  + + VT L  + ACS +G    G+ +H+ +IS  +  D  +  A+ DMY KCGDL 
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386

Query: 552 TAQRVFDS--MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           TA  +F++  + ER+V SW+ +I  YG+HG   +A  LF +M   G++PN++TF +IL A
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           CSH+G ++EG+  F  M    V P+++HYACMVD+L R+G +  AF++I  +P   +  +
Sbjct: 447 CSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV 506

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           WGALL  CRIH   ++ +     L        GYY L+SNIYA    W E   VR  M+ 
Sbjct: 507 WGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKS 566

Query: 730 TGLKKVPGYSTI 741
            GLKK   +S I
Sbjct: 567 RGLKKPAAFSVI 578



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 173/549 (31%), Positives = 292/549 (53%), Gaps = 27/549 (4%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTF------ 55
           L + CT+L  L  +H+ L   G L + P    RLI  Y+++G L S+R +FD        
Sbjct: 31  LLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHG 90

Query: 56  --KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
             + P+SF+   +++ Y       E+I LY  M R    ++NF YP VL+ C+S  +LG+
Sbjct: 91  HTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS--ELGA 148

Query: 114 --GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
             GE VHG++++ GF  D  ++ +++  Y + G + DA +VFD+M  RDVV W+++I  Y
Sbjct: 149 VFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208

Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
                  + L +F  M  EG   D +T +S+A A G+L   R A S+HG+ +      D 
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDV 268

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            +GNS + MY+KCG++  A   F ++E+R   SW +M+S Y ++G    AL  F +M   
Sbjct: 269 SVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQAS 328

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
           + +PN +T + ++ +C+ LG    G+ +H  +I   M  +   L  A+++ Y +CG +  
Sbjct: 329 ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID-TTLRNAIMDMYMKCGDLDT 387

Query: 352 CEKVIH--AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
             ++ +   +GER++ SWN+LIS Y   G  KEALEL  +MQ  G+ P+  +  S LSAC
Sbjct: 388 AVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSAC 447

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMW 467
            + G +  G +    + K+  + E    + ++DM  + GF N A+ L ++I  + S  +W
Sbjct: 448 SHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVW 507

Query: 468 NSMICGFYQNGNS----LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
            +++     +GN+    + A NLF    L          ++ I A SN  + ++ + V  
Sbjct: 508 GALLLACRIHGNTELGEIAANNLFQ---LEPEHTGYYVLMSNIYAASN--KWKEVEMVRQ 562

Query: 524 KLISYGVRK 532
            + S G++K
Sbjct: 563 NMKSRGLKK 571


>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 885

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/629 (30%), Positives = 330/629 (52%), Gaps = 7/629 (1%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R C    NL + T +H +++ +GL  D      LI  YA+ GSL  +R V    +E D
Sbjct: 99  MLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRERD 158

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  Y+      + +  Y +M +E    + F   +VL+A S   D+  G+ +H 
Sbjct: 159 VVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLIHL 218

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             IK G   D  + ++++  Y +FG ++ A +VF  M  ++ VSW++++  Y    D   
Sbjct: 219 EAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKN 278

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            LK+F  M+   +     T+ ++ + C    +LR  +++H   +RR  ++D  LG + + 
Sbjct: 279 VLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVD 338

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MYSKCG    A + F  IE+    +W+A+I+  ++ G  Q+A E F  M +    PN  +
Sbjct: 339 MYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFS 398

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +V+ +   +G L  G+S+HC I + G   + + +G ALI  Y + G + +  +V   +
Sbjct: 399 FASVISAATNVGDLYLGQSIHCCICKYGYESD-NSVGNALITMYMKSGFVQDGIRVFDTM 457

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R+++SWN L+S +     S + L +  QM   GL+P+ ++    L +C ++ ++  G 
Sbjct: 458 TNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGK 517

Query: 420 QIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           Q+H H+IK  +D  D FV ++LIDMY+K      A + F ++  + +  W  +I G  Q 
Sbjct: 518 QVHAHIIKNSLDGND-FVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQT 576

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
             + +A+    QM    ++ +E T  + +  CS +  L  G+ +H   I  G   D+++ 
Sbjct: 577 DKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVS 636

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
           +AL DMY KCG ++ A+ +F  +  R+ V+W+ +I  Y  HGQ   A   F+ MLD  I 
Sbjct: 637 SALVDMYGKCGCMEDAEAIFKGLFSRDTVAWNTIICGYSQHGQGQKALEAFRMMLDEDID 696

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           P+EVTF+ +L ACS+ G VEEGK +F+ M
Sbjct: 697 PDEVTFIGVLAACSYMGWVEEGKKHFDLM 725



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/584 (31%), Positives = 314/584 (53%), Gaps = 3/584 (0%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +LR C+S G+L  G  +HG +IK G + D  +  S++  Y + G L  ARKV   M 
Sbjct: 96  YSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMR 155

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            RDVVSW+++IA Y      S+G+K +  M +E + P+  T+ ++ +A      ++  + 
Sbjct: 156 ERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKL 215

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH   ++  + +D  +G++ + +Y+K G++  A+R F  + ++   SW A+++ Y + G 
Sbjct: 216 IHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGD 275

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +  L+ F +MLE +      TL TVL  CA  G LREGK++H   IR+    + ++LG 
Sbjct: 276 GKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELD-EFLGC 334

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            L++ Y++CG   E  KV + I E +I++W+ +I+   ++G S+EA EL   M+  G+ P
Sbjct: 335 NLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRP 394

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
           + FS AS +SA  NVG L LG  IH  + K   + D  V ++LI MY K GF      +F
Sbjct: 395 NQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVF 454

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           + +  + +V WN+++ GFY    S + + +F QM +  L  +  TF+  +++CS++  + 
Sbjct: 455 DTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVW 514

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            GK VH  +I   +  + ++ TAL DMYAK   L+ A   F+ ++ R++ +W+ +I  + 
Sbjct: 515 FGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHS 574

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
              +   A     QML  GIKPNE T  + L  CS   ++  G+   +     G   D+ 
Sbjct: 575 QTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVF 634

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
             + +VD+  + G +E A  +   + F  +   W  ++ G   H
Sbjct: 635 VSSALVDMYGKCGCMEDAEAIFKGL-FSRDTVAWNTIICGYSQH 677



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 226/428 (52%), Gaps = 1/428 (0%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NLR+   LH+  +      D      L++ Y++ G    +  VF+  +EPD   W+ +I 
Sbjct: 310 NLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIIT 369

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
                   +E+  L+H M ++    + F + SV+ A +++GDL  G+ +H  I K G++ 
Sbjct: 370 GLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYES 429

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D+ +  +++  Y + G + D  +VFD MT+RD+VSW+++++ ++D     +GL++F  M+
Sbjct: 430 DNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQML 489

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
            EG+ P+  T + +  +C  L ++   + +H H+++  +  +  +G + I MY+K   L 
Sbjct: 490 MEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLE 549

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A+  F K+  R   +WT +I+ ++++   +KA++   +ML    +PN  TL + L  C+
Sbjct: 550 DADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCS 609

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +  L  G+ +H   I+ G   +  ++  AL++ Y +CG M + E +   +  R+ ++WN
Sbjct: 610 RMATLGNGQQLHSLAIKSGHSGDV-FVSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAWN 668

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I  Y++ G  ++ALE    M    + PD  +    L+AC  +G ++ G +    + K 
Sbjct: 669 TIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMGWVEEGKKHFDLMSKS 728

Query: 429 DCKDEFVQ 436
            C ++  Q
Sbjct: 729 LCSEQLSQ 736


>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 183/543 (33%), Positives = 297/543 (54%), Gaps = 23/543 (4%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE---------KRC 261
           ++R  + IH H++       G L + F++  SK  +       FV               
Sbjct: 17  TIRSLKQIHAHLIA-----SGLLHDEFVL--SKVSEFFGKHIGFVDYAFDFLNQTDLHVG 69

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
           T  +  +I+ Y  S   + A   + +++     P++ T   VL +C     ++EG+ VH 
Sbjct: 70  TLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHG 129

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             ++ G   +  Y+  +L+ FY+ CGK     +V   +  R+++SW  LIS Y R G+  
Sbjct: 130 VAVKMGFLCDL-YVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFD 188

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLI 440
           EA+ L ++M    ++P+  +  S L ACG +G L +G  +HG V K       V  ++L+
Sbjct: 189 EAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALV 245

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMY KC     A  LF+ +  + +V W S+I G  Q     +++ LF+ M ++ +E D +
Sbjct: 246 DMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRI 305

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
              + + AC+++G L+ G+WV   +   G+  DI+I TAL DMYAKCG ++ A  +F+ +
Sbjct: 306 ILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGI 365

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
             RN+ +W+A++    MHG  ++A   F+ M+ +GI+PNEVTF+ IL AC HSG V EG+
Sbjct: 366 PNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGR 425

Query: 621 FYFNAM--RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
            YF  M  + F   P L+HY CM+DLL R+G ++ A+K I +MP P +  IWGALL+ C+
Sbjct: 426 SYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACK 485

Query: 679 IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
            +  +++ + I   L    + D+G Y LLSNIYA    WD+  +VR +M+  G++K PG 
Sbjct: 486 ANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGS 545

Query: 739 STI 741
           S I
Sbjct: 546 SVI 548



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 236/483 (48%), Gaps = 18/483 (3%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD----SFM 62
           C  +R L ++HAHL+ +GL +D    +++ E + +   +      FD   + D    +  
Sbjct: 15  CKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGK--HIGFVDYAFDFLNQTDLHVGTLP 72

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           +  LI  Y  +   + + L+Y +++        + +P VL+AC+    +  GE+VHG  +
Sbjct: 73  YNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAV 132

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K GF  D  +Q S+L  Y   G    A +VFD+M  RDVVSW+ +I+ Y       E + 
Sbjct: 133 KMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAIN 192

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M    V P+  T +S+  ACG +  L   + +HG V +R   I   +GN+ + MY 
Sbjct: 193 LFLKM---DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYV 249

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KC  L  A + F ++  R   SWT++IS   +    + +LE F  M     EP+ I L +
Sbjct: 250 KCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTS 309

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE 361
           VL +CA LG L  G+ V   I R+G+  E+D ++G AL++ YA+CG +     + + I  
Sbjct: 310 VLSACASLGALDYGRWVQEYIERQGI--EWDIHIGTALVDMYAKCGCIEMALHIFNGIPN 367

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG--- 418
           RNI +WN L+   A  G   EAL+    M   G+ P+  +  + L+AC + G +  G   
Sbjct: 368 RNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSY 427

Query: 419 -LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQ 476
             Q+         + E     +ID+  + G  + AY     +     V++W +++     
Sbjct: 428 FYQMISQPFNFSPRLEH-YGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKA 486

Query: 477 NGN 479
           NGN
Sbjct: 487 NGN 489



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 13/399 (3%)

Query: 3   LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++CT    +++  ++H   +  G   D      L+  Y+  G    +  VFD     D
Sbjct: 111 VLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRD 170

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  Y+    F+E+I L+ KM      ++ F+  SVL AC  +G L  G+ VHG
Sbjct: 171 VVSWTGLISGYVRTGLFDEAINLFLKM-DVVPNVATFV--SVLVACGRMGYLSMGKGVHG 227

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + K  F    V+  +++  Y +  CL +ARK+FD++  RD+VSW+SII+         +
Sbjct: 228 LVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKD 287

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F+ M   GVEPD + + S+  AC  L +L   R +  ++ R+ I+ D  +G + + 
Sbjct: 288 SLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVD 347

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  A   F  I  R   +W A++      G   +AL+ F  M+     PN +T
Sbjct: 348 MYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVT 407

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK--GMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            + +L +C   G + EG+S   Q+I +     P  ++ G  +I+     G + E  K I 
Sbjct: 408 FLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYG-CMIDLLCRAGLLDEAYKFIR 466

Query: 358 AIG-ERNILSWNMLISEYARKG---MSKEALELLVQMQT 392
            +    ++L W  L+S     G   +S+E L  L+++++
Sbjct: 467 NMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKS 505


>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
 gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
          Length = 688

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 197/619 (31%), Positives = 311/619 (50%), Gaps = 86/619 (13%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           LA+      +L  AR+ H  +L+  +  +  L N+ +  Y++ G L  A R F +I  R 
Sbjct: 23  LADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRN 82

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP-------------------------- 295
           T S+ A++S Y R G   +A   F    E   +P                          
Sbjct: 83  TFSYNALLSAYARLGRPDEARALF----EAIPDPDQCSYNAVVAALARHGRGHAADALRF 138

Query: 296 -----------NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD--YLGPALIEF 342
                      N  +  + L +CA     R G+ VH  + R    P  D  ++  AL++ 
Sbjct: 139 LAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARS---PHADDVHIRSALVDM 195

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           YA+C +  +  +V  A+ ERN++SWN LI+ Y + G   EAL L V+M   G  PD  ++
Sbjct: 196 YAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTL 255

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFV-QSSLIDMYSKCG--------FKNL- 451
           +S +SAC  + + + G Q+H H++K D  +D+ V  ++L+DMY+KCG        F ++ 
Sbjct: 256 SSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315

Query: 452 ----------------------AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
                                 A ++F ++ +K+V+ WN +I  + QNG   EAI LF Q
Sbjct: 316 SRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ 375

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR------KDIYIDTALTDM 543
           +  + +     T+   + AC NI  L+ G+  H  ++  G R       D+++  +L DM
Sbjct: 376 LKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDM 435

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y K G +    +VF+ M+ R+ VSW+AMI  Y  +G+  DA  LF++ML S   P+ VT 
Sbjct: 436 YLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTM 495

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           + +L AC HSG V+EG+ YF++M    G+ P   HY CMVDLL R+G ++ A ++I+ MP
Sbjct: 496 IGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMP 555

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              +  +W +LL  CR+HK +++ +     L      ++G Y LLSN+YAE G W E  +
Sbjct: 556 MEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFR 615

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           VR  M+  G+ K PG S I
Sbjct: 616 VRRSMKDRGVSKQPGCSWI 634



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 172/644 (26%), Positives = 294/644 (45%), Gaps = 124/644 (19%)

Query: 102 LRACSSLGDL-------GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           LRA S L DL             H RI+K     +  +  +++ TY   G L DAR+VFD
Sbjct: 17  LRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFD 76

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFH---------------SMVREGV------- 192
           ++  R+  S+++++++Y       E   +F                ++ R G        
Sbjct: 77  EIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADAL 136

Query: 193 -------EPDFV----TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
                    DFV    +  S   AC      R    +HG V R     D  + ++ + MY
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMY 196

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           +KC     A R F  + +R   SW ++I+CY ++G   +AL  FV+M+     P+ +TL 
Sbjct: 197 AKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLS 256

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK------------- 348
           +V+ +CAGL   REG+ VH  +++     +   L  AL++ YA+CG+             
Sbjct: 257 SVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316

Query: 349 ------------------MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
                             + + + V   + E+N+++WN+LI+ YA+ G  +EA+ L VQ+
Sbjct: 317 RSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-------DEFVQSSLIDMY 443
           +   + P  ++  + L+ACGN+  LQLG Q H HV+K   +       D FV +SL+DMY
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
            K G  +    +FER+  +  V WN+MI G+ QNG + +A++LF +M  +    D VT +
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMI 496

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
             + AC + G +++G+                                   R F SM+E 
Sbjct: 497 GVLSACGHSGLVDEGR-----------------------------------RYFHSMTED 521

Query: 564 NVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           + ++     ++ M+D  G  G L +A  L   M    ++P+ V + ++L AC    +VE 
Sbjct: 522 HGITPSRDHYTCMVDLLGRAGHLKEAEELINDM---PMEPDSVLWASLLGACRLHKNVEL 578

Query: 619 GKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           G+  + A R+F ++P +   Y  + ++ +  G     F++  SM
Sbjct: 579 GE--WTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSM 620



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 160/639 (25%), Positives = 281/639 (43%), Gaps = 115/639 (17%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L RS  NL      HA +L + +  +      L+ +YA +G LR +R VFD     ++F 
Sbjct: 26  LLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFS 85

Query: 63  WAVLIKCYMWNNFFEESILLYHK---------------------------------MIRE 89
           +  L+  Y      +E+  L+                                   M  +
Sbjct: 86  YNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHAD 145

Query: 90  QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
              ++ + + S L AC++  D  +GE+VHG + +     D  I+++++  Y +    +DA
Sbjct: 146 DFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDA 205

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           R+VFD M  R+VVSW+S+I  Y  N  V E L +F  M+  G  PD VT+ S+  AC  L
Sbjct: 206 RRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGL 265

Query: 210 CSLRPARSIHGHVLR-RKIKIDGPLGNSFIVMYSKCG----------------------- 245
            + R  R +H H+++  +++ D  L N+ + MY+KCG                       
Sbjct: 266 AADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSI 325

Query: 246 --------DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
                   ++  A+  F ++ ++   +W  +I+ Y ++G  ++A+  FV++      P  
Sbjct: 326 LTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTH 385

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKG----MGPEYD-YLGPALIEFYAECGKMSEC 352
            T   VL +C  +  L+ G+  H  ++++G     GPE D ++G +L++ Y + G + + 
Sbjct: 386 YTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDG 445

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            KV   +  R+ +SWN +I  YA+ G +K+AL L  +M      PDS ++   LSACG+ 
Sbjct: 446 AKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHS 505

Query: 413 GSLQLGLQIHGHVIKID-----CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           G +  G + + H +  D      +D +  + ++D+  + G                    
Sbjct: 506 GLVDEGRR-YFHSMTEDHGITPSRDHY--TCMVDLLGRAGHLK----------------- 545

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
                         EA  L + M    +E D V + + + AC     +E G+W   +L  
Sbjct: 546 --------------EAEELINDM---PMEPDSVLWASLLGACRLHKNVELGEWTAGRLFE 588

Query: 528 YGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
              +    Y+   L++MYA+ G      RV  SM +R V
Sbjct: 589 LDPQNSGPYV--LLSNMYAEMGKWAEVFRVRRSMKDRGV 625


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 189/536 (35%), Positives = 291/536 (54%), Gaps = 6/536 (1%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT--SWTAM 268
           SL+ A  IH  ++         L N+ I +Y+KCG L  A   F        T  +WT++
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I+  +      +AL  F +M      PN  T  ++L + A    +  G+ +H  I + G 
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
                ++G AL++ YA+C  M    +V   + ERN++SWN +I  +    +   A+ +  
Sbjct: 277 DANI-FVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335

Query: 389 Q-MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKC 446
             ++   ++P+  SV+S LSAC N+G L  G Q+HG V+K       +V +SL+DMY KC
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
            F +    LF+ +  + VV WN ++ GF QN    EA N F  M    +  DE +F T +
Sbjct: 396 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 455

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            + +++  L +G  +H ++I  G  K++ I  +L  MYAKCG L  A +VF+ + + NV+
Sbjct: 456 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 515

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW+AMI  Y +HG  N    LF+ ML  GI+P+ VTF+ +L ACSH+G VEEG  +FN+M
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 575

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
            +I  + P  +HYACMVDLL R+G ++ A + I SMP     S+WGALL  CR +  + +
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 635

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +   + L      + G Y LL+N+    G  +E  +VR +M V G++K PG S I
Sbjct: 636 GREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWI 691



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 250/534 (46%), Gaps = 14/534 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE--PDSFMWAVL 66
           +L+  T++H  +++      P     LI  YA+ G L  + L+F            W  L
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           I      N   +++ L+++M       + F + S+L A ++   +  G+++H  I K GF
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D +  + T+++  Y +   +  A +VFD+M  R++VSW+S+I  +F N      + +F  
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 336

Query: 187 MVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           ++RE  V P+ V++ S+  AC  +  L   R +HG V++  +     + NS + MY KC 
Sbjct: 337 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCR 396

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
                 + F  +  R   +W  ++  + ++  F++A   F  M      P+  +  TVL 
Sbjct: 397 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 456

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           S A L  L +G ++H QII+ G       LG +LI  YA+CG + +  +V   I + N++
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKNMCILG-SLITMYAKCGSLVDAYQVFEGIEDHNVI 515

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SW  +IS Y   G + + +EL   M + G+ P   +    LSAC + G ++ GL     +
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 575

Query: 426 IKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVV-MWNSMICGFYQNGNSLE 482
            KI   +   +  + ++D+  + G+ + A    E +  K    +W +++    + GN   
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGN--- 632

Query: 483 AINLFHQMYLNCLEMDEV---TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
            + +  +      EM+      ++     C+  G+LE+   V   +   GVRK+
Sbjct: 633 -LKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685


>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
 gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 203/656 (30%), Positives = 333/656 (50%), Gaps = 19/656 (2%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFD-KDDVIQTSILCTYGEFGCLDDARKVFDK 155
           ++ S+L  C    +L  G+ +H  ++K         +  ++   Y     ++ AR VFD+
Sbjct: 1   MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60

Query: 156 MTSRDV--VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           +    +  ++W  +I +Y  N    + L +++ M+  GV P   T   + +AC  L ++ 
Sbjct: 61  IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + IH HV       D  +  + +  Y+KCG+L  A + F ++ KR   +W AMIS ++
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180

Query: 274 RSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
                   +  F+ M  +    PNL T++ +  +    G LREGK+VH    R G   + 
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             +   +++ YA+   +    +V     ++N ++W+ +I  Y    M KEA E+  QM  
Sbjct: 241 -VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM-- 297

Query: 393 WGLMPDSFSVASS------LSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
             L+ D+ ++ +       L  C   G L  G  +H + +K     D  VQ+++I  Y+K
Sbjct: 298 --LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
            G    A+  F  I  K V+ +NS+I G   N    E+  LFH+M  + +  D  T L  
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + ACS++  L  G   H   + +G   +  I  AL DMY KCG L  A+RVFD+M +R++
Sbjct: 416 LTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDI 475

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           VSW+ M+  +G+HG   +A SLF  M ++G+ P+EVT + IL ACSHSG V+EGK  FN+
Sbjct: 476 VSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNS 535

Query: 626 MRI--FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           M    F V P + HY CM DLL+R+G ++ A+  ++ MPF  +  + G LL+ C  +K  
Sbjct: 536 MSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNA 595

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++   + K++   G        LLSN Y+    W++  ++R I +  GL K PGYS
Sbjct: 596 ELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 297/573 (51%), Gaps = 15/573 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPAS-TRLIESYAEMGSLRSSRLVFDTFK 56
           + L  +C   R L     +H HLL   L          L   YA    +  +R VFD   
Sbjct: 3   LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62

Query: 57  EP--DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
            P  +   W ++I+ Y  N+F E+++ LY+KM+      + + YP VL+AC+ L  +  G
Sbjct: 63  HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
           + +H  +    F  D  + T+++  Y + G L+ A KVFD+M  RD+V+W+++I+ +  +
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182

Query: 175 ADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             +++ + +F  M R +G+ P+  T++ +  A G   +LR  +++HG+  R     D  +
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
               + +Y+K   ++ A R F    K+   +W+AMI  Y  +   ++A E F +ML V +
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML-VND 301

Query: 294 EPNLITLIT---VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              ++T +    +L  CA  G L  G+ VHC  ++ G   +   +   +I FYA+ G + 
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT-VQNTIISFYAKYGSLC 360

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +    IG ++++S+N LI+        +E+  L  +M+T G+ PD  ++   L+AC 
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420

Query: 411 NVGSLQLGLQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           ++ +L  G   HG+ V+     +  + ++L+DMY+KCG  ++A  +F+ + ++ +V WN+
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--S 527
           M+ GF  +G   EA++LF+ M    +  DEVT L  + ACS+ G +++GK + + +    
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           + V   I     +TD+ A+ G L  A    + M
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573


>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
 gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
          Length = 598

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 179/495 (36%), Positives = 275/495 (55%), Gaps = 22/495 (4%)

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVK-----EEPNLITLITVLGSCAGLGW-L 313
           RC   + A+IS    +G    A  +F  +L          P+  TL   L +CA LG  L
Sbjct: 75  RCAHPFNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGL 134

Query: 314 REGKSVHCQIIRKGMGPEYDYLGP-----ALIEFYAECGKMSECEKVIHAIGERNILSWN 368
           REG   H    + G      +LG      AL+ FY  CG+  +  KV   + ER+++SW 
Sbjct: 135 REGCQAHAVAEKAG------FLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWT 188

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            L+S + R GM  EAL +L +M    + P+  ++AS L ACGN+G+ + G  +HG   + 
Sbjct: 189 ALLSAFTRGGMFMEALGVLAEMD---VTPNEVTLASVLVACGNLGTARAGKAVHGWYFRR 245

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
           + + +  V ++L+DMY KC   +LA  +F+ +  + +V W  MI G  Q     EA+ +F
Sbjct: 246 EKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVF 305

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
           + M ++ ++ D+V   T + AC+++G LE G+WVH  +   G+  D+++ T++ DMY KC
Sbjct: 306 NAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKC 365

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G L TA  +F  M  +NV SW+A+I+ + +HG+  +A   F +M+ SG+ PNEVTF+ +L
Sbjct: 366 GCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVL 425

Query: 608 WACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
            AC HSG V+EG+  F  M + + + P   HY CMVDLL R+G I+ A+ +I +MP    
Sbjct: 426 GACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPG 485

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
              W  LL+ C+ H R+D  + I   +    ++ NG Y LLSN+YA    W + GK R  
Sbjct: 486 VFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGF 545

Query: 727 MEVTGLKKVPGYSTI 741
           M   G++K PG S I
Sbjct: 546 MNEKGMQKEPGSSVI 560



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 209/412 (50%), Gaps = 14/412 (3%)

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGD-LGSGEKVHGRIIKCGFDKDDVIQ 133
           F   ++LL        A    +  P+ L+AC+ LG  L  G + H    K GF     +Q
Sbjct: 97  FRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQAHAVAEKAGFLGRVPVQ 156

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            +++  YG  G   DARKVFD+M  RDVVSW+++++++       E L +   M    V 
Sbjct: 157 NALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEM---DVT 213

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+ VT+ S+  ACG L + R  +++HG   RR+ +++  +GN+ + MY KC  L  A R 
Sbjct: 214 PNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRV 273

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  +  R   SWT MIS   +     +ALE F  M     +P+ + L TVL +CA LG L
Sbjct: 274 FDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGAL 333

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
             G+ VH  I RKG+  E+D ++G ++++ Y +CG +     +   +  +N+ SWN LI+
Sbjct: 334 ESGRWVHEYIERKGI--EWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALIN 391

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK----I 428
            +A  G  +EAL+   +M   GL P+  +  + L AC + G +Q G Q+   + K     
Sbjct: 392 GFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLS 451

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGN 479
             +D +    ++D+  + G    AY + + +  +  V  W +++     +G 
Sbjct: 452 PWEDHY--GCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGR 501



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 199/392 (50%), Gaps = 11/392 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
            LR+  + HA     G     P    L+  Y   G    +R VFD   E D   W  L+ 
Sbjct: 133 GLREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLS 192

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +     F E++ +  +M     T +     SVL AC +LG   +G+ VHG   +   + 
Sbjct: 193 AFTRGGMFMEALGVLAEM---DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKEL 249

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           + ++  ++L  Y +   LD AR+VFD + +RD+VSW+ +I+        SE L++F++M 
Sbjct: 250 NLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQ 309

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             GV+PD V + ++  AC  L +L   R +H ++ R+ I+ D  +G S + MY KCG L 
Sbjct: 310 ISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLD 369

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           +A   F ++  +  +SW A+I+ +   G  ++AL+ F +M+     PN +T ITVLG+C 
Sbjct: 370 TAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACC 429

Query: 309 GLGWLREGKSVHCQIIRKG--MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NIL 365
             G ++EG+ +  +++ K   + P  D+ G  +++     G + E   VI A+  R  + 
Sbjct: 430 HSGLVQEGRQLF-ELMTKSYKLSPWEDHYG-CMVDLLGRAGLIQEAYDVIKAMPMRPGVF 487

Query: 366 SWNMLIS---EYARKGMSKEALELLVQMQTWG 394
           +W  L+S    + R   S++ L  + ++++ G
Sbjct: 488 TWVTLLSACQAHGRMDFSQQILMHIHELESSG 519


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 194/538 (36%), Positives = 292/538 (54%), Gaps = 39/538 (7%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +YS    L  + R F  I      +W ++I CY   G   ++L SF+ ML     P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYA------ECGK---- 348
             +VL SCA L  L  G+S+H  IIR G+  ++D Y G AL+  Y+      E G+    
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGL--DFDLYTGNALMNMYSKLRFLEESGRQRLG 166

Query: 349 -------MSE---------------CEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
                  M+E                 K+   + E++++SWN +I+  AR G+ +E L +
Sbjct: 167 AGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM 226

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYS 444
           + +M    L PDSF+++S L        +  G +IHG  I+  +D  D +V SSLIDMY+
Sbjct: 227 IREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDA-DIYVASSLIDMYA 285

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KC     +  +F  + ++  + WNS+I G  QNG   E +  F QM +  ++    +F +
Sbjct: 286 KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + AC+++  L  GK +H  +   G  ++I+I ++L DMYAKCG+++TA+++FD M  R+
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +VSW+AMI    +HGQ  DA  LF+QM   GIKPN V FM +L ACSH G V+E   YFN
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFN 465

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           +M R FG+ P ++HYA + DLL R+G +E A+  I  M     GSIW  LL+ CR+H  I
Sbjct: 466 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI 525

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           D+ + +   +     N+ G Y LL+NIY+    W E  K R+ M   G++K P  S I
Sbjct: 526 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWI 583



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 198/407 (48%), Gaps = 33/407 (8%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y+ +  L  S  +F+T   P +  W  +I+CY  +    +S+  +  M+       + ++
Sbjct: 50  YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL------------ 146
           PSVL++C+ L DL  GE +HG II+ G D D     +++  Y +   L            
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169

Query: 147 --------------------DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
                               D  RK+F+ M  +D+VSW++IIA    N    E L+M   
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M    ++PD  T+ S+     E   +   + IHG  +R+ +  D  + +S I MY+KC  
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTR 289

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +  + R F  + +R   SW ++I+   ++G F + L  F +ML  K +P   +  +++ +
Sbjct: 290 VADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPA 349

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA L  L  GK +H  I R G   E  ++  +L++ YA+CG +   +++   +  R+++S
Sbjct: 350 CAHLTTLHLGKQLHGYITRNGFD-ENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           W  +I   A  G + +A+EL  QM+T G+ P+  +  + L+AC + G
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGG 455



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 2/311 (0%)

Query: 47  SSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS 106
           S R +F+   E D   W  +I     N  +EE++ +  +M        +F   SVL   +
Sbjct: 191 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIA 250

Query: 107 SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
              D+  G+++HG  I+ G D D  + +S++  Y +   + D+ +VF  +T RD +SW+S
Sbjct: 251 ENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNS 310

Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           IIA    N    EGL+ F  M+   ++P   +  S+  AC  L +L   + +HG++ R  
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              +  + +S + MY+KCG++ +A++ F ++  R   SWTAMI      G    A+E F 
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAE 345
           +M     +PN +  + VL +C+  G + E       + R  G+ P  ++   A+ +    
Sbjct: 431 QMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYA-AVSDLLGR 489

Query: 346 CGKMSECEKVI 356
            G++ E    I
Sbjct: 490 AGRLEEAYDFI 500



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 110/206 (53%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +PL     ++ +   +H   +  GL  D   ++ LI+ YA+   +  S  VF    E D 
Sbjct: 246 LPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDG 305

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I   + N  F+E +  + +M+  +    ++ + S++ AC+ L  L  G+++HG 
Sbjct: 306 ISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGY 365

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I + GFD++  I +S++  Y + G +  A+++FD+M  RD+VSW+++I     +    + 
Sbjct: 366 ITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDA 425

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC 206
           +++F  M  EG++P+ V  +++  AC
Sbjct: 426 IELFEQMETEGIKPNHVAFMAVLTAC 451



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 53/109 (48%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           MP     T L    +LH ++   G   +   ++ L++ YA+ G++R+++ +FD  +  D 
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W  +I     +    ++I L+ +M  E    ++  + +VL ACS  G
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGG 455


>gi|302772569|ref|XP_002969702.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
 gi|300162213|gb|EFJ28826.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
          Length = 689

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 204/696 (29%), Positives = 352/696 (50%), Gaps = 23/696 (3%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           + + G +  +R +F     P+ F W +++     N    E++LL  +MI E A      +
Sbjct: 2   FGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD-VIQTSILCTYGEFGCLDDARKVFDKMT 157
            ++L  C++  DL  G+  H  I+ CG +    V+  +++  YG+   LD AR  FD+M 
Sbjct: 62  VTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRME 121

Query: 158 ----SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
                RDVV+W+S++A++  N  + E  ++F  M  EG++P  VT+  + E+C      R
Sbjct: 122 HQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS---GDR 178

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             +  H  VL   ++ D  L NS + MY++CG L  +   F  I+++   SW  MIS   
Sbjct: 179 QGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEA 238

Query: 274 RSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           R G  ++A+E   ++ LE   EP+ +T I+V+ +C+ LG L    ++   +   G   + 
Sbjct: 239 RLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDL 298

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             LG A++  + + G +         +  +N++SWN LIS YA+    +  LEL  QM  
Sbjct: 299 -LLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQ 357

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL 451
            G+  +S +  S L AC  + +L  G ++H  +     +    V ++LI+MY KC     
Sbjct: 358 EGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCEELQF 417

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  L ER Q   +V  N MI  + Q G+S  A+   H M L  ++ D VT++ A++AC+ 
Sbjct: 418 AQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTYIGALEACAC 477

Query: 512 IGQLEKGKWVHHKLISYGVRKDIY-------IDTALTDMYAKCGDLQTAQRVFDSMSERN 564
                KG+ V+ +++S G    +        I  AL  MY+KCG +  A     S+S R 
Sbjct: 478 SKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLSSRG 537

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +++W++M+  Y   G+ ++A  +  QM   G+ P++V F  +++ACSH+G + E      
Sbjct: 538 LLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEALVRLA 597

Query: 625 -AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
                +G       Y C+VD+L R G ++ A +++H+MP+  +   W ALL  C +H  +
Sbjct: 598 WVYGDYGTAMGAGLYECVVDVLGRMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGDL 657

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
           +         ++  +  +G Y LLSN+YA   +W++
Sbjct: 658 ERGARTAGHEALLDSG-SGRYVLLSNMYA---SWED 689



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 206/387 (53%), Gaps = 9/387 (2%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           M+ KCGD+  A   F  + +    SWT +++   R+G   +AL    +M+     P+++ 
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM----SECEKV 355
            +T+L  CA    L +GK  H  I+  G+      LG ALI  Y +C  +    ++ +++
Sbjct: 61  FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            H    R++++WN L++ +   G  +EA  L  +M+  G+ P S ++   L +C   G  
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDR 178

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           Q G   H  V+ +  + DEF+ +SL+ MY++CG    + L+F  I QK ++ WN MI   
Sbjct: 179 Q-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237

Query: 475 YQNGNSLEAINLFHQMYLNCL-EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
            + G+S EA+ L  ++ L    E DEVTF++ + ACS +G L+    +   + S G   D
Sbjct: 238 ARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDD 297

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + +  A+ +M+ K G L  A+  FD +  +NVVSW+ +I  Y  + Q      LF+QM  
Sbjct: 298 LLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQ 357

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGK 620
            G+K N VTF+++L ACS   +++ G+
Sbjct: 358 EGVKANSVTFVSLLDACSTIPALDFGR 384



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 257/556 (46%), Gaps = 45/556 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +  SC+  R+    H  +L  GL  D      L++ YA  G L  SRLVF    + D   
Sbjct: 170 VLESCSGDRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIIS 229

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQ-ATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W V+I         EE++ L  ++  E         + SV+ ACS LGDL     +   +
Sbjct: 230 WNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELV 289

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
              GFD D ++  +++  +G+ GCLD AR  FD++  ++VVSW+ +I+ Y  N      L
Sbjct: 290 SSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCL 349

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  M +EGV+ + VT +SL +AC  + +L   R +H  +    +++   +  + I MY
Sbjct: 350 ELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMY 409

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KC +L  A+    + +     +   MIS Y + G  ++A++    M     + +++T I
Sbjct: 410 GKCEELQFAQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTYI 469

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEY------DYLGPALIEFYAECGKMSECEKV 355
             L +CA      +G++V+ +++  G   +       D +  AL+  Y++CG + +    
Sbjct: 470 GALEACACSKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAA 529

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
           + ++  R +L+W  +++ YA  G + EAL +L QMQ  G++PD  + ++ + AC + G L
Sbjct: 530 LQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLL 589

Query: 416 QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
                 H  +++                       LA++  +        ++  ++    
Sbjct: 590 ------HEALVR-----------------------LAWVYGDYGTAMGAGLYECVVDVLG 620

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV--HHKLISYGVRKD 533
           + G   EA  L H M     E D + ++  + AC+  G LE+G     H  L+  G  + 
Sbjct: 621 RMGRLQEAEELMHAMP---YEPDSLAWMALLGACTVHGDLERGARTAGHEALLDSGSGRY 677

Query: 534 IYIDTALTDMYAKCGD 549
           +     L++MYA   D
Sbjct: 678 VL----LSNMYASWED 689


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 199/611 (32%), Positives = 320/611 (52%), Gaps = 11/611 (1%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWS-SIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +   Y   G    A  +  +M     VS+S S++ SY       E L ++ +M       
Sbjct: 51  LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR----AF 106

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D +T    A+AC  L   R  R++H   L      D  + N+ I MY  CGD+ +AE  F
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVF 166

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +  R   SW A+I+   ++G+ ++ALE F +M       +  T+++VL +CA    L 
Sbjct: 167 GAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLN 226

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI-HAIGERNILSWNMLISE 373
            G++VH  +  KG+G +Y  +  ALI+ Y +C  + +  +V  H   +++++SW  +I  
Sbjct: 227 TGRAVHRLVEDKGLG-DYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGA 285

Query: 374 YARKGMSKEALELLVQMQTWGLM-PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
           Y     + EA+ L  QM   G   P+  ++   LSAC ++ S +     H   I++  K 
Sbjct: 286 YVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKS 345

Query: 433 EF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           +  V+++LID Y++CG   L  L  ER   ++   WN+ + G+  +G   +AI LF +M 
Sbjct: 346 DIAVETALIDAYARCGKMKLMRLTLERGSWRAET-WNAALSGYTVSGREKKAIELFKRMI 404

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              +  D  T  + + A +    L++GK +H  L++ G  +   I T L D+Y+K GDL 
Sbjct: 405 AESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLD 464

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A  +F  + E++VV+W+ +I  Y +HG    A  L+ +M++SG KPN VT   +L+ACS
Sbjct: 465 AAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACS 524

Query: 612 HSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H+G ++EG   F  MR + G+ P+ +HY+C+VD+L R+G IE A ++I  MPF  + S+W
Sbjct: 525 HAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVW 584

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           GALL  C +HK ++  +   K L      + G Y LL NIYA    W +   VR +M   
Sbjct: 585 GALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVER 644

Query: 731 GLKKVPGYSTI 741
           GL K PG S +
Sbjct: 645 GLLKEPGSSLV 655



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 261/546 (47%), Gaps = 12/546 (2%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWA-VLIKCYMWNNFFEESILLYHKMIREQATISNFI 97
           Y   G   S+  +     +P    ++  L++ Y       E++ +Y  M        +  
Sbjct: 55  YCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAM----RAFDHLT 110

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +P   +AC+ L     G  VH R +  GF  D  +Q +++  Y   G +  A  VF  M 
Sbjct: 111 FPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMR 170

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +R VVSW+++IA    N      L++F  M  +GV  D  T++S+  AC +   L   R+
Sbjct: 171 NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRA 230

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-KRCTTSWTAMISCYNRSG 276
           +H  V  + +     + N+ I MY KC  L  A R F   +  +   SWTAMI  Y  + 
Sbjct: 231 VHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLND 290

Query: 277 WFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
              +A+    +ML      PN +T++ +L +CA +   +  K  H   IR G+  +   +
Sbjct: 291 RAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIA-V 349

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI+ YA CGKM +  ++    G     +WN  +S Y   G  K+A+EL  +M    +
Sbjct: 350 ETALIDAYARCGKM-KLMRLTLERGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESV 408

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL 454
            PDS ++AS L A      L+ G  IH  ++ +   +   + + LID+YSK G  + A+ 
Sbjct: 409 RPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWA 468

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           LF+ + +K VV W ++I G+  +G++  AI L+ +M  +  + + VT  T + ACS+ G 
Sbjct: 469 LFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGM 528

Query: 515 LEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
           +++G  V   + + +G+  +    + L DM  + G ++ A R+   M  E +   W A++
Sbjct: 529 IDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALL 588

Query: 573 DCYGMH 578
               +H
Sbjct: 589 GACVLH 594



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +    +L++   +H  LL  G       +T LI+ Y++ G L ++  +F    E D 
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             W  +I  Y  +     +ILLY +M+      +     ++L ACS  G +  G KV
Sbjct: 479 VAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV 535


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 189/561 (33%), Positives = 291/561 (51%), Gaps = 9/561 (1%)

Query: 181 LKMFHSMVREGVEPDF-VTMLS---LAEACGELCSLRPARSIHGHVLRRKIK-IDGPLGN 235
           LK  H  ++E  + D  VT  S   L EACG+L SL   R IH   LRR +K   G + N
Sbjct: 68  LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR-LRRTVKNPSGSIEN 126

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MY  CG  +  ++ F ++  +   SW  +IS Y ++G  +KA+  F  M      P
Sbjct: 127 CLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRP 186

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N    +++L SC G  +L  GK +H  +IR  +      +  A+   Y  CG +   + V
Sbjct: 187 NSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANIT-VETAICNMYVRCGWLEGAKLV 245

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  +N ++W  L+  Y +    + ALEL  +M   G+  D F  +  L  C  +   
Sbjct: 246 FDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDW 305

Query: 416 QLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            +G QIH H++K+  + E  V + L+D Y KCG    AY  F RI + + V W+++I GF
Sbjct: 306 DMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            Q+G   + I +F  +    + ++   + +  QAC+    L  G   H   I  G+   +
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL 425

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           Y ++A+  MY+KCG L  A+R F+S+ E + V+W+A+I  Y  HG   +A   F++M   
Sbjct: 426 YGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSY 485

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
           G++PN VTF+ +L ACSHSG V E K Y  +M R +GV+P + HY CM+D  SR+G ++ 
Sbjct: 486 GVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQE 545

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A ++I+ MPF  +   W +LL GC  H  + + K   + L      D   Y LL N+Y+ 
Sbjct: 546 ALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSA 605

Query: 714 EGNWDEFGKVRSIMEVTGLKK 734
            G W+E G VR +M    LKK
Sbjct: 606 FGKWEEAGHVRKLMAERELKK 626



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 264/537 (49%), Gaps = 14/537 (2%)

Query: 84  HKMIRE----QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCT 139
           H  ++E      +++   Y  +  AC  L  L  G  +H R+ +   +    I+  +L  
Sbjct: 72  HDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRM 131

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           Y + G   D +KVFD+M  +++VSW  +I++Y  N ++ + +++F  M   G+ P+    
Sbjct: 132 YCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVY 191

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
           +SL ++C     L   + IH HV+R ++  +  +  +   MY +CG L  A+  F  ++ 
Sbjct: 192 MSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           +   +WT ++  Y ++   + ALE F +M     E +      VL  C GL     G+ +
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQI 311

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
           H  I++ G   E   +G  L++FY +CG +    +    I E N +SW+ LIS +++ G 
Sbjct: 312 HSHIVKLGAESEVS-VGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGR 370

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSS 438
            ++ +++   +++ G++ +SF   S   AC    +L +G Q HG  IK       + +S+
Sbjct: 371 LEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESA 430

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           ++ MYSKCG  + A   FE I +   V W ++I G+  +GN+ EA+  F +M    +  +
Sbjct: 431 MVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPN 490

Query: 499 EVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
            VTF+  + ACS+ G + + K ++      YGV+  I     + D Y++ G LQ A  + 
Sbjct: 491 AVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELI 550

Query: 558 DSMS-ERNVVSWSAMIDCYGMHGQLN----DAASLFKQMLDSGIKPNEVTFMNILWA 609
           + M  E + +SW +++     H  L      A +LF+  LD G     +   N+  A
Sbjct: 551 NRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFR--LDPGDTAGYILLFNLYSA 605



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 240/500 (48%), Gaps = 21/500 (4%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LF +C  LR L     +H  L  T  +        L+  Y + GS    + VFD     +
Sbjct: 93  LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKN 152

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W ++I  Y  N   E++I L+  M       ++ +Y S+L++C     L  G+++H 
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHS 212

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+   + +  ++T+I   Y   G L+ A+ VFD M +++ V+W+ ++  Y     +  
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272

Query: 180 GLKMFHSMVREGVEPD-FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            L++F  M  EGVE D FV  + L   CG L      R IH H+++   + +  +G   +
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCG-LEDWDMGRQIHSHIVKLGAESEVSVGTPLV 331

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             Y KCGD+ SA R+F +I +    SW+A+IS +++SG  +  ++ F  +       N  
Sbjct: 332 DFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSF 391

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
              +V  +CA    L  G   H   I++G+   Y Y   A++  Y++CG++    +   +
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKRGL-VSYLYGESAMVTMYSKCGRLDYARRAFES 450

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I E + ++W  +IS YA  G + EAL    +MQ++G+ P++ +  + L+AC + G +   
Sbjct: 451 IDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEA 510

Query: 419 LQIHGHVIKIDCKDEFVQSS------LIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
            Q  G +     +D  V+ +      +ID YS+ G    A  L  R+  +   + W S++
Sbjct: 511 KQYLGSM----SRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566

Query: 472 CGFYQNGN----SLEAINLF 487
            G + + +     + A NLF
Sbjct: 567 GGCWAHCDLKLGKIAAENLF 586



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 166/351 (47%), Gaps = 3/351 (0%)

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N+ +   +++G  KEA + L +M    +     S      ACG + SL  G  IH  + +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 428 -IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
            +      +++ L+ MY  CG       +F+ +  K++V W  +I  + +NG   +AI L
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F  M  + +  +   +++ +Q+C     LE GK +H  +I   +  +I ++TA+ +MY +
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVR 235

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG L+ A+ VFD M  +N V+W+ ++  Y    +L  A  LF +M   G++ +E  F  +
Sbjct: 236 CGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIV 295

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L  C      + G+   + +   G E ++     +VD   + GDIE A++    +  P N
Sbjct: 296 LKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEP-N 354

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY-YTLLSNIYAEEGN 716
              W AL++G     R++    I   L   G   N + YT +    A + N
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQAN 405


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 180/535 (33%), Positives = 306/535 (57%), Gaps = 15/535 (2%)

Query: 216 RSIHGHVLRRK-----IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           + +H H+L+ +     I  +  L ++ +++       LS    F  I+K  ++++  MI 
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALS---IFNHIDKPESSAYNVMIR 94

Query: 271 --CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
              + RS     AL  F KM E   + +  T  +VL +C+ +  LREG+ VH  I++ G 
Sbjct: 95  GLAFKRSP--DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGF 152

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
               +++   LI+ YA CG++     V   + ER+I++WN ++S Y + G+  E ++L  
Sbjct: 153 KSN-EFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFR 211

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG 447
           ++    +  D  ++ S L ACG + +L++G  I  +++    + +  + +SLIDMY+KCG
Sbjct: 212 KILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCG 271

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
             + A  LF+ + ++ VV W++MI G+ Q     EA+NLFH+M    +  +EVT ++ + 
Sbjct: 272 QVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLY 331

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           +C+ +G  E GKWVH  +    ++  + + T L D YAKCG +  +  VF  MS +NV +
Sbjct: 332 SCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFT 391

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+A+I     +G+   A   F  ML++ +KPN+VTF+ +L ACSH+  V++G+  FN+MR
Sbjct: 392 WTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMR 451

Query: 628 I-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
             F +EP ++HY CMVD+L R+G +E A++ I +MPFP N  +W  LL  CR HK I++ 
Sbjct: 452 RDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMA 511

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +   + ++      +G Y LLSN YA  G  ++  +VRS+++   +KK+PG S I
Sbjct: 512 EKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLI 566



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 158/573 (27%), Positives = 291/573 (50%), Gaps = 18/573 (3%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEM--GSLRSSRLVFDTFKEPDS 60
           + + C   + L ++HAHLL T    DP  +  ++ES A +   ++  +  +F+   +P+S
Sbjct: 27  ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPES 86

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             + V+I+   +    + ++LL+ KM  +      F + SVL+ACS +  L  GE+VH  
Sbjct: 87  SAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHAL 146

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I+K GF  ++ ++ +++  Y   G +  AR VFD M  R +V+W+S+++ Y  N    E 
Sbjct: 147 ILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEV 206

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +K+F  ++   +E D VTM+S+  ACG L +L     I  +++ + ++ +  L  S I M
Sbjct: 207 VKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDM 266

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG + +A + F +++KR   +W+AMIS Y ++   ++AL  F +M +    PN +T+
Sbjct: 267 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++VL SCA LG    GK VH  I +K M      LG  LI+FYA+CG +    +V   + 
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVT-LGTQLIDFYAKCGYIDRSVEVFKEMS 385

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +N+ +W  LI   A  G  K ALE    M    + P+  +    LSAC +   +  G  
Sbjct: 386 FKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRH 445

Query: 421 IHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGF 474
           +   + +   I+ + E     ++D+  + GF   AY   + +    + V+W +++  C  
Sbjct: 446 LFNSMRRDFDIEPRIEHY-GCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRA 504

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD- 533
           ++N    E  +L H   L      +   L+   A   +G++E    V   +    ++K  
Sbjct: 505 HKNIEMAEK-SLEHITRLEPAHSGDYILLSNTYAL--VGRVEDAIRVRSLIKEKEIKKIP 561

Query: 534 ----IYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
               I +D  + + +++ G+ + ++ + D++ +
Sbjct: 562 GCSLIELDGVVHEFFSEDGEHKHSKEIHDALDK 594


>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 688

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 201/674 (29%), Positives = 354/674 (52%), Gaps = 47/674 (6%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR C  +     GE +   I+K G  ++  +  +++  Y +F  L DA KVFD+MT R++
Sbjct: 12  LRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNI 71

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMV--REGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           V+W+++++ Y  +   S+ ++++  MV  +E    +F+    L +ACG +  ++    ++
Sbjct: 72  VTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVL-KACGLVGDIQLGSFVY 130

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
             + +  +K D  L NS + M+ K G L  A  +F +I +  +TSW  +IS Y ++G  +
Sbjct: 131 ERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGMVE 190

Query: 280 KALESFVKMLEVKEEPNLIT----------------------------------LITVLG 305
           +A+  F ++     +PN+++                                  L   L 
Sbjct: 191 EAVSLFNRI----PQPNIVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE---R 362
           +C+  G L  GK +H  +++ G+     +   ALI+ Y+ CG +S+   V H        
Sbjct: 247 ACSFGGLLTMGKQLHGCVVKSGL-ESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCN 305

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
            +  WN ++S +     ++ AL LL+ +    L  DS++++ +L  C N+ +L+LGLQ+H
Sbjct: 306 TVAVWNSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVH 365

Query: 423 GHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
             V+    + D  V S L+D+++  G    A+ LF R+  K ++ ++ +I G  ++G + 
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
            A  LF ++    L+ D+    + ++ CS++  L  GK +H   I  G + +    TAL 
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALG 485

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           DMY KCG++  +  +FD M ER+VVSW+ +I  +G +G++ +A   F +M++S I+PNEV
Sbjct: 486 DMYVKCGEIDNSVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEV 545

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           TF+ +L AC HSG +EE +     M+  +G+EP L+HY C+VDLL ++G  + A ++I  
Sbjct: 546 TFLGLLSACRHSGLLEEARSILETMKCEYGLEPYLEHYYCVVDLLGQAGRFQEAEELIKK 605

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MP   + +IW +LL  C  HK   ++  I ++L      D   YT LSN YA  G WD+ 
Sbjct: 606 MPLEPDKTIWMSLLTACGTHKNAGLITVIAEKLLKAFPEDPSLYTSLSNAYATLGMWDQL 665

Query: 721 GKVRSIMEVTGLKK 734
            +VR   +  G K+
Sbjct: 666 SEVREAAKKLGAKE 679



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 167/616 (27%), Positives = 284/616 (46%), Gaps = 43/616 (6%)

Query: 4   FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            R C  ++   R   + AH++  G+  +   +  +I  Y +   L  +  VFD   E + 
Sbjct: 12  LRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNI 71

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
             W  ++  Y  +    ++I LY +M+  Q   +N FIY +VL+AC  +GD+  G  V+ 
Sbjct: 72  VTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSFVYE 131

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           RI K     D V+  S++  + + G L +A   F ++   +  SW+++I+ Y     V E
Sbjct: 132 RIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGMVEE 191

Query: 180 GLKMFH------------------------------SMVREGVEPDFVTMLSLAEACGEL 209
            + +F+                               M REG+  D   +    +AC   
Sbjct: 192 AVSLFNRIPQPNIVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR-CTT--SWT 266
             L   + +HG V++  ++      ++ I MYS CG L  A   F + +   C T   W 
Sbjct: 252 GLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAVWN 311

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
           +M+S +  +   + AL   + + +     +  TL   L  C  L  LR G  VH  ++  
Sbjct: 312 SMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVVVS 371

Query: 327 GMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
           G   E DY+ G  L++ +A  G + E  K+ H +  ++I++++ LI    + G +  A  
Sbjct: 372 GY--ELDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYS 444
           L  ++   GL  D F V+S L  C ++ SL  G QIHG  IK   + E V  ++L DMY 
Sbjct: 430 LFRELIKLGLDADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGDMYV 489

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG  + + +LF+ + ++ VV W  +I GF QNG   EA   FH+M  + +E +EVTFL 
Sbjct: 490 KCGEIDNSVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLG 549

Query: 505 AIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-E 562
            + AC + G LE+ + +   +   YG+   +     + D+  + G  Q A+ +   M  E
Sbjct: 550 LLSACRHSGLLEEARSILETMKCEYGLEPYLEHYYCVVDLLGQAGRFQEAEELIKKMPLE 609

Query: 563 RNVVSWSAMIDCYGMH 578
            +   W +++   G H
Sbjct: 610 PDKTIWMSLLTACGTH 625



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 144/315 (45%), Gaps = 34/315 (10%)

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           +A+ L  CG + + + G  I  H++K    ++ F+ +++I MY      + A+ +F+ + 
Sbjct: 8   IAAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMT 67

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE-MDEVTFLTAIQACSNIGQLEKGK 519
           ++++V W +M+ G+  +G   +AI L+ +M  +  E  +E  +   ++AC  +G ++ G 
Sbjct: 68  ERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGS 127

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
           +V+ ++    ++ D+ +  ++ DM+ K G L  A   F  +   N  SW+ +I  Y   G
Sbjct: 128 FVYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAG 187

Query: 580 QLNDAASLFKQMLDSGI--------------KPNEVTFMNI----------------LWA 609
            + +A SLF ++    I               P  + F+                  L A
Sbjct: 188 MVEEAVSLFNRIPQPNIVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS-MPFPANG- 667
           CS  G +  GK     +   G+E      + ++D+ S  G +  A  + H   P   N  
Sbjct: 248 CSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTV 307

Query: 668 SIWGALLNGCRIHKR 682
           ++W ++L+G  I++ 
Sbjct: 308 AVWNSMLSGFLINEE 322



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 92/183 (50%), Gaps = 2/183 (1%)

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           + MD       ++ C  I   ++G+ +   ++  G+ +++++   +  MY     L  A 
Sbjct: 1   MAMDLKLIAAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAH 60

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWACSHS 613
           +VFD M+ERN+V+W+ M+  Y   G+ + A  L+++M++S  +  NE  +  +L AC   
Sbjct: 61  KVFDEMTERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLV 120

Query: 614 GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
           G ++ G F +  +    ++ D+     +VD+  ++G +  A      +  P N + W  L
Sbjct: 121 GDIQLGSFVYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRP-NSTSWNTL 179

Query: 674 LNG 676
           ++G
Sbjct: 180 ISG 182


>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 195/638 (30%), Positives = 337/638 (52%), Gaps = 14/638 (2%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEF--GCLDDARKVFDKMTSRDVVSWSSIIASYF 172
            ++H  ++  G+ +  V+   ++  Y     G L  A +VFD M +R+  +W+++I    
Sbjct: 77  RRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLV 136

Query: 173 DNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
           D    SE L+ +  MVR+G V  D  T   + +AC  L  +   R +  +V    I    
Sbjct: 137 DAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENV-ETDIARGI 195

Query: 232 PLGNSFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
             GN F+      M++KCG L  A   F  +  R   SWTAMI    R G + + +    
Sbjct: 196 AKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLK 255

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP-ALIEFYAE 345
           +M      P+ +   TV+ +C  +  LR G ++H   ++ G+G   D   P AL++ Y +
Sbjct: 256 RMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGD--DICVPNALVDMYCK 313

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           C ++     +  +I  +++ SW+ +I+ +++  +   ++ L  +M   G+ P+S ++AS 
Sbjct: 314 CARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASI 373

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           L +   +  L+ G +IH   ++   +  EF+ S+LID Y + G+   A ++FE   +  +
Sbjct: 374 LPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDL 433

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
           V+ NSMI G+  N +S  A+ L   +    L  D VT ++ +  C+   +L +GK +H  
Sbjct: 434 VVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAY 493

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
            I + +     +  ALTDMY KCG L+ A ++F  M+ERN V+++ +I   G HG  + A
Sbjct: 494 AIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQA 553

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVD 643
             LF  M   G+ P++VTF+ +L  CSH G +++G  ++++M R + + PD +HY+C+VD
Sbjct: 554 FILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVD 613

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY 703
           L SRSG ++ A+  I ++       + G LL+ CR H R+D+ + + + +     ND GY
Sbjct: 614 LYSRSGKLDDAWSFIANLQEVPEIDVLGCLLSACRDHHRMDIAELVAERIFEQNPNDPGY 673

Query: 704 YTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + LLSN+YA  G W E  ++R+++E   LKK  G S I
Sbjct: 674 HILLSNVYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 711



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 296/568 (52%), Gaps = 10/568 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEM--GSLRSSRLVFDTFKEPDSF 61
            +S   L ++ RLHA LLV G H     + +L+ +YA M  G L  +  VFD     +SF
Sbjct: 67  LQSAPALTEVRRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSF 126

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGR 120
            W  +IK  +    F E++  Y  M+R+ + +++ F YP VL+AC++LG++  G KV   
Sbjct: 127 AWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQEN 186

Query: 121 I---IKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +   I  G  K +V +Q +++  + + GCL +AR +F+ M  RD+ SW+++I       D
Sbjct: 187 VETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGD 246

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E + +   M  EG  PD +   ++  ACG++  LR   ++HG+ ++  +  D  + N+
Sbjct: 247 WLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNA 306

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY KC  L  A   F  I+ +   SW+ +I+ ++++  +  ++  F +M+    +PN
Sbjct: 307 LVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPN 366

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T+ ++L S + L  LR GK +HC  +R  +    ++L  ALI+FY   G + + + V 
Sbjct: 367 STTIASILPSISELRLLRYGKEIHCFSLRNRL-EHSEFLASALIDFYCRQGYIRDAQIVF 425

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               + +++  N +I  Y     S+ AL LL  +   GL PD  +V S L  C     L 
Sbjct: 426 EFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLL 485

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G ++H + I+ +    F V ++L DMY KCG   +A  +F  + +++ V +N++I    
Sbjct: 486 QGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLG 545

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDI 534
           ++G++ +A  LF  M  + +  D+VTF+  +  CS+ G ++KG   +  ++  Y +  D 
Sbjct: 546 KHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDK 605

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSE 562
              + + D+Y++ G L  A     ++ E
Sbjct: 606 EHYSCIVDLYSRSGKLDDAWSFIANLQE 633



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 169/362 (46%), Gaps = 2/362 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR    LH + +  G+  D      L++ Y +   L  +  +F +    D 
Sbjct: 273 IPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDV 332

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           F W+ +I  +  N  +  S+ L+ +M+      ++    S+L + S L  L  G+++H  
Sbjct: 333 FSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCF 392

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++   +  + + ++++  Y   G + DA+ VF+     D+V  +S+I  Y  N D    
Sbjct: 393 SLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESA 452

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++  ++++EG+ PD VT++S+   C +   L   + +H + +R  I     + N+   M
Sbjct: 453 LRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDM 512

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG L  A + F+ + +R T ++  +IS   + G   +A   F  M      P+ +T 
Sbjct: 513 YCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTF 572

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           + +L  C+  G + +G   +  ++R   + P+ ++    +++ Y+  GK+ +    I  +
Sbjct: 573 VALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYS-CIVDLYSRSGKLDDAWSFIANL 631

Query: 360 GE 361
            E
Sbjct: 632 QE 633


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 189/567 (33%), Positives = 311/567 (54%), Gaps = 38/567 (6%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS---KCGDLLSAERTFVKIEKRCTTSWTA 267
           S+R  + IH H+++  +  +     S ++ +S   + GD+  A   F  IE+     W +
Sbjct: 41  SIRTFKQIHAHIIKTGLH-NTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNS 99

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI   + S     AL  FV+M+    EPN  T   +L SCA L    EGK +H  +++ G
Sbjct: 100 MIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLG 159

Query: 328 MGPEYDYLGPALIEFYAECGKMSECE-------------------------------KVI 356
              +  ++  +LI  YA+ G+M+  +                               ++ 
Sbjct: 160 FVSDV-FIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLF 218

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  ++++SWN +I+ YA+ G SKEAL L   M+   + P+  ++ S LSAC    +L 
Sbjct: 219 DEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALD 278

Query: 417 LGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           LG  +   +     C +  + ++LIDMYSKCG    A  LF+ + ++ V+ WN MI G+ 
Sbjct: 279 LGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYT 338

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
              +  EA+ LF +M  + +E  E+TFL+ + +C+++G ++ GKW+H  +          
Sbjct: 339 HMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTS 398

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + T+L D+YAKCG++  A++VFD M  +++ SW+AMI    MHGQ + A  LF +M   G
Sbjct: 399 LSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDG 458

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           I+PNE+TF+ IL AC H+G V+ G+ +F++M + + + P  QHY CM+DLL R+G  E A
Sbjct: 459 IEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEA 518

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
             ++ +M    +G+IWG+LL  CR H R+++ + + + L     ++ G Y LLSNIYA  
Sbjct: 519 ESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGA 578

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G WD+  ++R+ +   G+KKVPG +TI
Sbjct: 579 GKWDDVARIRTRLNDRGMKKVPGCTTI 605



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 253/515 (49%), Gaps = 39/515 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEP 58
           + L   C ++R   ++HAH++ TGLH    A ++LIE  + +  G +  +  +F++ +EP
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + F+W  +I+    +     +++ + +MI      +++ +P +L++C+ L     G+++H
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 119 GRIIKCGFDKDDVIQTSILCTYGE-------------------------------FGCLD 147
             ++K GF  D  I TS++  Y +                               +G +D
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
            AR++FD+M  +DVVSW+++IA Y       E L +F  M +  V P+  T++S+  AC 
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           +  +L    S+   +  R +  +  L N+ I MYSKCGDL +A   F  + +R   SW  
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  Y     +++AL  F +ML    EP  IT +++L SCA LG +  GK +H   I K 
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHA-YINKN 391

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                  L  +LI+ YA+CG +    +V   +  +++ SWN +I   A  G + +A EL 
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELF 451

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---KIDCKDEFVQSSLIDMYS 444
            +M + G+ P+  +    LSAC + G + LG Q    ++   KI  K +     +ID+  
Sbjct: 452 SKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHY-GCMIDLLG 510

Query: 445 KCGFKNLAYLLFERIQQKSV-VMWNSMICGFYQNG 478
           + G    A  L + ++ K    +W S++     +G
Sbjct: 511 RAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHG 545



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 156/579 (26%), Positives = 268/579 (46%), Gaps = 87/579 (15%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCG-----FDKDDVIQTSILCTYGEFGCLDDARKV 152
           +PS L+  S    + + +++H  IIK G     F    +I+ S +   G+   +  A  +
Sbjct: 30  HPS-LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGD---ISYAISL 85

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F+ +   ++  W+S+I     +   +  L  F  M+  GVEP+  T   L ++C +L S 
Sbjct: 86  FNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASA 145

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE--------------------- 251
              + IH HVL+     D  +  S I MY++ G++ +A+                     
Sbjct: 146 HEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGY 205

Query: 252 ----------RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
                     + F ++  +   SW AMI+ Y + G  ++AL  F  M +    PN  T++
Sbjct: 206 ALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIV 265

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +VL +CA    L  G S+   I  +G+      +  ALI+ Y++CG +    ++   + E
Sbjct: 266 SVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN-ALIDMYSKCGDLQTARELFDDMLE 324

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+++SWN++I  Y      KEAL L  +M   G+ P   +  S L +C ++G++ LG  I
Sbjct: 325 RDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWI 384

Query: 422 HGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H ++ K  +     + +SLID+Y+KCG    A  +F+ ++ KS+  WN+MICG   +G +
Sbjct: 385 HAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQA 444

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +A  LF +M  + +E +E+TF+  + AC + G ++ G                      
Sbjct: 445 DKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLG---------------------- 482

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSG 595
                        Q+ F SM +   +S     +  MID  G  G   +A SL + M    
Sbjct: 483 -------------QQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM---E 526

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +KP+   + ++L AC   G VE G+    A R+F +EPD
Sbjct: 527 VKPDGAIWGSLLGACRDHGRVELGELV--AERLFELEPD 563



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 219/445 (49%), Gaps = 43/445 (9%)

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA--ECGK 348
           ++E P+L     +L  C  +   R  K +H  II+ G+      L   LIEF A    G 
Sbjct: 27  LQEHPSL----KLLSKCQSI---RTFKQIHAHIIKTGLHNTLFALS-KLIEFSAVSRSGD 78

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           +S    + ++I E N+  WN +I   +       AL   V+M   G+ P+S++    L +
Sbjct: 79  ISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKS 138

Query: 409 CGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYL------------- 454
           C  + S   G QIH HV+K+    D F+ +SLI+MY++ G  N A L             
Sbjct: 139 CAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISF 198

Query: 455 ------------------LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
                             LF+ +  K VV WN+MI G+ Q G S EA+ LF  M    + 
Sbjct: 199 TALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP 258

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            +E T ++ + AC+    L+ G  +   +   G+  ++ +  AL DMY+KCGDLQTA+ +
Sbjct: 259 PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAREL 318

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           FD M ER+V+SW+ MI  Y       +A +LF++ML SG++P E+TF++IL +C+H G++
Sbjct: 319 FDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAI 378

Query: 617 EEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           + GK+    +              ++DL ++ G+I  A ++   M   +  S W A++ G
Sbjct: 379 DLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMICG 437

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDN 701
             +H + D    +  ++S  G   N
Sbjct: 438 LAMHGQADKAFELFSKMSSDGIEPN 462


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 175/499 (35%), Positives = 294/499 (58%), Gaps = 15/499 (3%)

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           ++K    SW ++I+ + RSG   +AL +F  M ++   PN  T    + SC+ L  L  G
Sbjct: 46  VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAG 105

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K +H Q    G G +  ++  ALI+ Y++CG +++  K+   I ERN++SW  +IS Y +
Sbjct: 106 KQIHQQAFVFGYGSDI-FVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164

Query: 377 KGMSKEAL----ELLV-------QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
              ++EA+    E L+       ++   G+  DS  +   +SAC  V    +   +HG  
Sbjct: 165 NERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLA 224

Query: 426 IKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K   +    V ++L+D Y+KCG  +++  +F+ +++  V  WNS+I  + QNG S+EA 
Sbjct: 225 VKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAF 284

Query: 485 NLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +LF  M     +  + VT    + AC++ G L+ GK +H +++   +  ++ + T++ DM
Sbjct: 285 SLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDM 344

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y KCG ++ A++ FD +  +NV SW+ M+  YGMHG   +A  +F +M+  GIKPN +TF
Sbjct: 345 YCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITF 404

Query: 604 MNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           +++L ACSH+G ++EG  +FN M+  F VEP ++HY+CMVDLL R+G ++ A+ +I  M 
Sbjct: 405 VSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMK 464

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              +  +WG+LL  CRIHK +++ +   ++L     ++ GYY LLSNIYA+ G WD+  +
Sbjct: 465 VKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVER 524

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +R +M+  GL K PGYS +
Sbjct: 525 MRILMKNHGLLKTPGYSIV 543



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 209/400 (52%), Gaps = 24/400 (6%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +P  +++CSSL DL +G+++H +    G+  D  + ++++  Y + G L+DARK+FD++ 
Sbjct: 89  FPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP 148

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMV-----------REGVEPDFVTMLSLAEAC 206
            R+VVSW+S+I+ Y  N    E + +F   +             GV  D V +  +  AC
Sbjct: 149 ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
             +C       +HG  +++  +    +GN+ +  Y+KCG++  + + F  +E+    SW 
Sbjct: 209 ARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWN 268

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           ++I+ Y ++G   +A   F  M++  E   N +TL  VL +CA  G L+ GK +H Q+++
Sbjct: 269 SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK 328

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
             +      +G ++++ Y +CG++    K    +  +N+ SW ++++ Y   G  KEA++
Sbjct: 329 MELEDNL-VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMK 387

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-----SSLI 440
           +  +M   G+ P+  +  S L+AC + G L+ G        K+ C+ +        S ++
Sbjct: 388 VFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFN---KMKCEFDVEPGIEHYSCMV 444

Query: 441 DMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQN 477
           D+  + G+   AY L + ++ K   ++W S++  C  ++N
Sbjct: 445 DLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKN 484



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 213/458 (46%), Gaps = 49/458 (10%)

Query: 5   RSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           +SC++L  L    ++H    V G   D   ++ LI+ Y++ G L  +R +FD   E +  
Sbjct: 94  KSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVV 153

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQAT-----------ISNFIYPSVLRACSSLGD 110
            W  +I  Y+ N    E++ L+ + +    T           + + +   V+ AC+ +  
Sbjct: 154 SWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCV 213

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
               E VHG  +K GF+    +  +++  Y + G +  +RKVFD M   DV SW+S+IA 
Sbjct: 214 KSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAV 273

Query: 171 YFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
           Y  N    E   +F  MV+ G V  + VT+ ++  AC    +L+  + IH  V++ +++ 
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELED 333

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           +  +G S + MY KCG +  A + F +++++   SWT M++ Y   G  ++A++ F +M+
Sbjct: 334 NLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
               +PN IT ++VL +C+  G L+EG               + +      EF  E G  
Sbjct: 394 RCGIKPNYITFVSVLAACSHAGLLKEG---------------WHWFNKMKCEFDVEPG-- 436

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
                         I  ++ ++    R G  KEA  L+ +M+   + PD     S L AC
Sbjct: 437 --------------IEHYSCMVDLLGRAGYLKEAYGLIQEMK---VKPDFIVWGSLLGAC 479

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
               +++LG      + K+D  +      L ++Y+  G
Sbjct: 480 RIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 87/143 (60%)

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           NL  +  + + + SV  WNS+I  F ++G+SL+A+  F  M    L  +  TF   I++C
Sbjct: 37  NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSC 96

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           S++  L  GK +H +   +G   DI++ +AL DMY+KCG L  A+++FD + ERNVVSW+
Sbjct: 97  SSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWT 156

Query: 570 AMIDCYGMHGQLNDAASLFKQML 592
           +MI  Y  + +  +A  LFK+ L
Sbjct: 157 SMISGYVQNERAREAVFLFKEFL 179


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 188/581 (32%), Positives = 316/581 (54%), Gaps = 43/581 (7%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS---AERTFV 255
           +LS  + C    S +  + +H  +LR  +  D P   S +   S      +   A   F 
Sbjct: 28  ILSTIDKCS---SSKQLKEVHARMLRTGLFFD-PFSASKLFTASALSSFSTLDYARNLFD 83

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLR 314
           +I +    +W  +I  Y  S    ++   F+ +L+  E+ PN  T   V+ + + L   R
Sbjct: 84  QIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASR 143

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G +VH   I+   G +  Y+  +L+ FY  CG +S  E++   I  ++++SWN +IS +
Sbjct: 144 VGTAVHGMAIKLSFGMDL-YILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAF 202

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV----IKIDC 430
           A+    ++ALEL ++M+   +MP+S ++   LSAC     L+ G  +  ++    IK+D 
Sbjct: 203 AQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDL 262

Query: 431 ----------------------------KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
                                       +D F  + ++D Y+K G  + A L+F  +  K
Sbjct: 263 TLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVK 322

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL-EMDEVTFLTAIQACSNIGQLEKGKWV 521
            +  WN +I  + QNG   EA+ +F+++ L+ + + DEVT ++ + AC+ +G ++ G W+
Sbjct: 323 EIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWI 382

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  +   G+  + ++ ++L DMYAKCG L+ A  VF S+ ER+V  WSAMI   GMHG+ 
Sbjct: 383 HVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRG 442

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYAC 640
             A  LF +M ++ +KPN VTF N+L ACSH+G V+EG+ +F+ M  ++GV P+++HYAC
Sbjct: 443 KAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYAC 502

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVD+L R+G +E A ++I+ M    + S+WGALL  C +H  +++ +    +L      +
Sbjct: 503 MVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRN 562

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +G   LLSNIYA+ G W++  ++R +M  T LKK PG S+I
Sbjct: 563 HGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSI 603



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 260/520 (50%), Gaps = 48/520 (9%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCG--FDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           S +  CSS   L   ++VH R+++ G  FD     +         F  LD AR +FD++ 
Sbjct: 30  STIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIP 86

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-PDFVTMLSLAEACGELCSLRPAR 216
             ++ +W+++I +Y  ++D  +   +F  ++ +  + P+  T   + +A  EL + R   
Sbjct: 87  QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGT 146

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           ++HG  ++    +D  + NS +  Y  CGDL  AER F  I  +   SW +MIS + +  
Sbjct: 147 AVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGN 206

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
             + ALE F+KM      PN +T++ VL +CA    L  G+ V   I RKG+  +   L 
Sbjct: 207 CPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLT-LC 265

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILS------------------------------ 366
            A+++ Y +CG + + +K+   + ER++ S                              
Sbjct: 266 NAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIA 325

Query: 367 -WNMLISEYARKGMSKEALELLVQMQTWGLM-PDSFSVASSLSACGNVGSLQLGLQIHGH 424
            WN+LIS Y + G  KEAL +  ++Q   +  PD  ++ S+LSAC  +G++ LG  IH +
Sbjct: 326 AWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVY 385

Query: 425 V----IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           +    I ++C    + SSL+DMY+KCG    A  +F  ++++ V +W++MI G   +G  
Sbjct: 386 IKREGIVLNCH---LISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRG 442

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTA 539
             AI+LF +M    ++ + VTF   + ACS+ G +++G+   H++   YGV  ++     
Sbjct: 443 KAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYAC 502

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMH 578
           + D+  + G L+ A  + + MS     S W A++    +H
Sbjct: 503 MVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH 542



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 262/516 (50%), Gaps = 51/516 (9%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYA--EMGSLRSSRLVFDTFKEPDSFMWA 64
           C++ ++L  +HA +L TGL +DP ++++L  + A     +L  +R +FD   +P+ + W 
Sbjct: 35  CSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWN 94

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIK 123
            LI+ Y  ++   +S +++  ++ +   + N F +P V++A S L     G  VHG  IK
Sbjct: 95  TLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIK 154

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F  D  I  S++  YG  G L  A ++F  ++ +DVVSW+S+I+++       + L++
Sbjct: 155 LSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALEL 214

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M RE V P+ VTM+ +  AC +   L   R +  ++ R+ IK+D  L N+ + MY+K
Sbjct: 215 FLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTK 274

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAM-------------------------------ISCY 272
           CG +  A++ F ++ +R   SWT M                               IS Y
Sbjct: 275 CGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAY 334

Query: 273 NRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            ++G  ++AL  F ++ L    +P+ +TL++ L +CA LG +  G  +H  I R+G+   
Sbjct: 335 EQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLN 394

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             +L  +L++ YA+CG + +  +V +++ ER++  W+ +I+     G  K A++L  +MQ
Sbjct: 395 C-HLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQ 453

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGL-------QIHGHVIKIDCKDEFVQSSLIDMYS 444
              + P+S +  + L AC + G +  G         ++G V ++        + ++D+  
Sbjct: 454 EAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKH-----YACMVDILG 508

Query: 445 KCGFKNLAY-LLFERIQQKSVVMWNSMI--CGFYQN 477
           + GF   A  L+ E     S  +W +++  C  + N
Sbjct: 509 RAGFLEEAMELINEMSTTPSASVWGALLGACSLHMN 544


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 191/636 (30%), Positives = 338/636 (53%), Gaps = 6/636 (0%)

Query: 111 LGSGEKVHGRIIKCGFDKDD--VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
           L   + +HG +IK    +    V+   ++  Y +      AR+VFD++  + V SW+ ++
Sbjct: 77  LKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLM 136

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
               +N    +G+  F  ++   + PD   + +  +AC  + S+     +H  V+ R   
Sbjct: 137 VGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFS 196

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
               +  S + MY+K G +  + + F  +E R   SW AMIS +  +G + +A  SF++M
Sbjct: 197 SRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRM 256

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
           L  +  PN+   I+V  +   LG + +G+ ++      GM     ++G ALI+ +A+CG 
Sbjct: 257 LGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNI-HVGTALIDMFAKCGC 315

Query: 349 MSECEKVI--HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           ++E   V   +  G    L WN +IS +   G  +EA+ L ++M    +  D ++  S+L
Sbjct: 316 VTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTL 375

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           ++  ++ SL+   Q+HG + K       + ++L+D Y+KCG  +    LF+  ++ + + 
Sbjct: 376 NSIADMRSLEYVKQLHGMIWKSGSIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQIS 435

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           W +++  + Q+    +A+++F QM     + ++VTF   + +C+++  LE G+ VH    
Sbjct: 436 WTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTC 495

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
             G  +D  +++ L DMYAKCG ++ A +VF+S+ + +V+SW+AMI  Y  HG   DA  
Sbjct: 496 KTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALE 555

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLL 645
           LF++M      PN  TF+ +L+ACSH G V+EG  YF+ M   +G+ P+++HYAC+VD+L
Sbjct: 556 LFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDIL 615

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
            R G +  A+K I  MP   +  +W  LL  CR+H  I + K   +++     +D     
Sbjct: 616 GRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALV 675

Query: 706 LLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           LLSN Y E GN +    VR++M+   ++K  G S I
Sbjct: 676 LLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWI 711



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 180/662 (27%), Positives = 326/662 (49%), Gaps = 57/662 (8%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
            +L+ +Y++     S+R VFD   +   F W VL+     N F+ + I  + +++     
Sbjct: 102 NQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIV 161

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
              +   + ++AC  +  +  GE VH ++I  GF     + TS+L  Y + G + D+ KV
Sbjct: 162 PDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKV 221

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F+ + +R+ VSW+++I+ +  N   +E    F  M+ E + P+    +S+++A G+L  +
Sbjct: 222 FNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDV 281

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS--WTAMIS 270
              R I+       ++ +  +G + I M++KCG +  +   FV     C  +  W AMIS
Sbjct: 282 EKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMIS 341

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG-MG 329
            +  SG  ++A+  F++M +   + ++ T  + L S A +  L   K +H  I + G +G
Sbjct: 342 GFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIG 401

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
                L  AL++ YA+CG++    K+     E N +SW  L++ Y++    ++AL +  Q
Sbjct: 402 VS---LCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQ 458

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGF 448
           M+  G  P+  + +  L++C ++ SL+ G Q+H    K    +D+ V+S LIDMY+KCG 
Sbjct: 459 MREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGS 518

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  +FE ++   V+ W +MI G+ Q+G + +A+ LF +M L     +  TFL  + A
Sbjct: 519 VRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFA 578

Query: 509 CSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           CS+ G +++G ++ H     YG+  +I       + YA                      
Sbjct: 579 CSHGGLVDEGLRYFHLMEERYGLVPEI-------EHYA---------------------- 609

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
              ++D  G  G+L +A   +K ++   I+P+E  +  +L AC   G+++  K    A +
Sbjct: 610 --CVVDILGRVGRLTEA---WKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAK--IAAQK 662

Query: 628 IFGVEPDLQHYACMVDLLSRS----GDIEGAFKMIHSMPFPA----NGSIWGALLNGCRI 679
           +    PD   +A +V LLS +    G+IEG   + + M   A     G  W  +  G +I
Sbjct: 663 VLSYNPD--DFAALV-LLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICI--GGKI 717

Query: 680 HK 681
           HK
Sbjct: 718 HK 719



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 265/564 (46%), Gaps = 43/564 (7%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA ++  G       +T L+  YA++G +  S  VF++ +  +   W  +I  ++ N  
Sbjct: 186 VHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGL 245

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           + E+   + +M+ E+   +   + SV +A   LGD+  G  ++    + G   +  + T+
Sbjct: 246 YAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTA 305

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVS--WSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           ++  + + GC+ ++  VF    S   V+  W+++I+ +  +    E + +F  M +  ++
Sbjct: 306 LIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIK 365

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D  T  S   +  ++ SL   + +HG + +    I   L N+ +  Y+KCG+L +  + 
Sbjct: 366 RDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKL 424

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F   E+    SWT +++ Y++S  ++ AL  F +M E+  +PN +T   VL SCA L  L
Sbjct: 425 FDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSL 484

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
             G+ VH    + G   +   +   LI+ YA+CG + +  KV  ++ + +++SW  +IS 
Sbjct: 485 EYGQQVHSLTCKTGFARD-KCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISG 543

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
           YA+ GM+K+ALEL  +M+     P+S +    L AC + G +  GL+ + H+++      
Sbjct: 544 YAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLR-YFHLME------ 596

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
                              Y L   I+  + V+    I G  + G   EA     +M   
Sbjct: 597 -----------------ERYGLVPEIEHYACVV---DILG--RVGRLTEAWKFIMKMP-- 632

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            +E DE  + T + AC   G ++  K    K++SY    D      L++ Y + G+++  
Sbjct: 633 -IEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYN-PDDFAALVLLSNTYREAGNIEGG 690

Query: 554 QRVFDSMSERNVVSWSAMIDCYGM 577
             V      RN++   AM    GM
Sbjct: 691 LNV------RNMMKSQAMRKETGM 708



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 5/173 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC +L  L    ++H+    TG   D    + LI+ YA+ GS+R +  VF++ K+PD
Sbjct: 474 VLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPD 533

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK-VH 118
              W  +I  Y  +   ++++ L+ KM       ++  +  +L ACS  G +  G +  H
Sbjct: 534 VISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFH 593

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIAS 170
               + G   +      ++   G  G L +A K   KM    D   WS+++ +
Sbjct: 594 LMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGA 646


>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
 gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 187/544 (34%), Positives = 303/544 (55%), Gaps = 10/544 (1%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG-DLLSAERTFVKIEK 259
           SL + C ++ S    R  H HV++  ++ D  +GNS + +Y K G D L   R F  +  
Sbjct: 65  SLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFV 124

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           +   SW +MI+ Y R G    A+E F  ML+   EPN  TL  V+ +C+ +G L  GK  
Sbjct: 125 KDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCF 184

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
           H  ++R+G       L  +LI+ Y      S+  ++   + E + + W  +IS + R  +
Sbjct: 185 HGVVVRRGFDSNPVIL-SSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDL 243

Query: 380 SKEALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QS 437
            +EAL    ++ +   L PD+++  S L+ACGN+G L+ G +IH  VI        V +S
Sbjct: 244 YEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTES 303

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           SL+DMY KCG    +  LF+R+  ++ V W++++  +  NG+  +A+NLF +M     E+
Sbjct: 304 SLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK----EV 359

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D  +F T I+AC+ +  +  GK +H + I  G  +D+ +++AL D+YAKCG +  A RVF
Sbjct: 360 DLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVF 419

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D M  RN+++W++MI  +  +G    A  +F+ M+  GIKP+ ++F+ +L+ACSH+G V+
Sbjct: 420 DRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVD 479

Query: 618 EGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           + + YF+ M   +G++P ++HY CMVDLL R+G +E A  +I +     + S+W  LL  
Sbjct: 480 QARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGA 539

Query: 677 CRIH-KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKV 735
           C          + I K+L          Y  L+N+Y   G WD+  KVR +M+   LKK+
Sbjct: 540 CTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKM 599

Query: 736 PGYS 739
           PG S
Sbjct: 600 PGQS 603



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 219/416 (52%), Gaps = 10/416 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRS-SRLVFDTFKEP 58
           L ++C  +   TR    HAH++ +GL  D      L+  Y ++GS    +R VFD     
Sbjct: 66  LLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVK 125

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   WA +I  Y+       +I L+  M+      + F   +V++ACS +G+L  G+  H
Sbjct: 126 DVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFH 185

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G +++ GFD + VI +S++  YG      DAR++FD++   D V W+++I+++  N    
Sbjct: 186 GVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYE 245

Query: 179 EGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           E L  F+   R   + PD  T  S+  ACG L  LR    IH  V+      +    +S 
Sbjct: 246 EALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSL 305

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCG +  ++R F ++  R + SW+A+++ Y  +G ++KA+  F +M EV    +L
Sbjct: 306 VDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEV----DL 361

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            +  TV+ +CAGL  +  GK +HCQ IRKG G     +  AL++ YA+CG ++   +V  
Sbjct: 362 YSFGTVIRACAGLAAVTPGKEIHCQYIRKG-GWRDVIVESALVDLYAKCGCINFAYRVFD 420

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            +  RN+++WN +I  +A+ G S  A+++   M   G+ PD  S    L AC + G
Sbjct: 421 RMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTG 476



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 188/366 (51%), Gaps = 10/366 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+ +  L      H  ++  G   +P   + LI+ Y        +R +FD   EPD
Sbjct: 168 VIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPD 227

Query: 60  SFMWAVLIKCYMWNNFFEESI-LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
              W  +I  +  N+ +EE++   Y K    +    N+ + SVL AC +LG L  GE++H
Sbjct: 228 PVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIH 287

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
            ++I  GF  + V ++S++  YG+ G ++ ++++FD+M++R+ VSWS+++A Y  N D  
Sbjct: 288 AKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYE 347

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + + +F    RE  E D  +  ++  AC  L ++ P + IH   +R+    D  + ++ +
Sbjct: 348 KAVNLF----REMKEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALV 403

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y+KCG +  A R F ++  R   +W +MI  + ++G    A++ F  M++   +P+ I
Sbjct: 404 DLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCI 463

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           + I +L +C+  G + + +     +  K G+ P  ++    +++     G + E E +I 
Sbjct: 464 SFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYN-CMVDLLGRAGLLEEAENLIE 522

Query: 358 AIGERN 363
               RN
Sbjct: 523 NAECRN 528



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 5/308 (1%)

Query: 371 ISEYARKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           I ++ + G+  +AL LL  +  +   +      AS L  C  V S   G Q H HV+K  
Sbjct: 31  ILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSG 90

Query: 430 CK-DEFVQSSLIDMYSKCGFKN-LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
            + D FV +SL+ +Y K G  + L   +F+ +  K VV W SMI G+ + G S  AI LF
Sbjct: 91  LETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELF 150

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M  + +E +  T    I+ACS IG L  GK  H  ++  G   +  I ++L DMY + 
Sbjct: 151 WDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRN 210

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK-QMLDSGIKPNEVTFMNI 606
                A+++FD + E + V W+ +I  +  +    +A   F  +     + P+  TF ++
Sbjct: 211 SVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSV 270

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L AC + G + +G+     +  +G   ++   + +VD+  + G +E + ++   M    N
Sbjct: 271 LTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMS-NRN 329

Query: 667 GSIWGALL 674
              W ALL
Sbjct: 330 SVSWSALL 337


>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g20730-like [Brachypodium distachyon]
          Length = 558

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 179/553 (32%), Positives = 304/553 (54%), Gaps = 8/553 (1%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
            +P F    SL ++C  +   R  RS+H  ++      D  +    ++ Y+K GD+ +A 
Sbjct: 11  ADPAFY--YSLLQSC--MSCFRRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAAR 66

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F  +  R   SWTAM+S Y+R+G  ++AL+ F  ML     PN  T  +V  +CAG G
Sbjct: 67  KVFDGMPHRSVVSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAG 126

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            +R G+ VH   + KG      ++  AL++ +  CG + +  ++   +  +++++WN L+
Sbjct: 127 CVRSGEQVHA-CVAKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALL 185

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC- 430
                +    +AL LL  M    ++PD F+  S+L ACG V  L     IH  +IK+   
Sbjct: 186 RGLVERAQYGDALGLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYW 245

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN-SLEAINLFHQ 489
            ++ V  S+ID Y+KC   + A L+++ I +  +V   ++I G+  + N S +A+ LF +
Sbjct: 246 GEKVVIGSIIDAYAKCRGLSSARLIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCK 305

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           ++   L +D V   + +  C+N+  L  G  +H  +       D+ +D A+ DMYAK G+
Sbjct: 306 IHRKGLRIDGVLLSSLLGLCANVASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGE 365

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
              A+R FD M  RNVVSW+++I   G +G   DA SLF +M++ G+KPN+VTF+++L A
Sbjct: 366 FADARRAFDEMPYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSA 425

Query: 610 CSHSGSVEEGKFYFNA-MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
           C HSG   +G  YF + M  +G++P  +HY+  +DLL+R G ++ A+K++ ++    N S
Sbjct: 426 CGHSGLTSKGMEYFTSMMSKYGIDPRAEHYSSAIDLLARGGQLKDAWKLVQNIDIEPNSS 485

Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           ++GA+L  C+ H  + + +T  K L       + +Y +L+N+YAE   W++  + R +M 
Sbjct: 486 MFGAMLGACKTHGSMPLGETAAKNLFTIAPESSVHYAVLANMYAESSLWEDAQRTRKLMA 545

Query: 729 VTGLKKVPGYSTI 741
            T   KV G S I
Sbjct: 546 ETSGGKVAGCSVI 558



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 256/566 (45%), Gaps = 44/566 (7%)

Query: 3   LFRSCTN-LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           L +SC +  R+   +H  ++ +    D   ST+L+  YA+ G + ++R VFD        
Sbjct: 19  LLQSCMSCFRRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHRSVV 78

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  ++  Y  N    E++ L+  M+      + F Y SV  AC+  G + SGE+VH  +
Sbjct: 79  SWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSGEQVHACV 138

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            K  F  D  +Q++++  +   G + DA ++F +M  +DVV+W++++    + A   + L
Sbjct: 139 AKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVERAQYGDAL 198

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +  SM+R  + PD  T  S  +ACG +  L     IH  +++     +  +  S I  Y
Sbjct: 199 GLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSIIDAY 258

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKMLEVKEEPNLITL 300
           +KC  L SA   +  I +    S TA+IS Y+      + A+E F K+       + + L
Sbjct: 259 AKCRGLSSARLIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLL 318

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAI 359
            ++LG CA +  LR G  +H  + ++   P  D  L  A+++ YA+ G+ ++  +    +
Sbjct: 319 SSLLGLCANVASLRFGTQIHAYMCKR--QPMTDVALDNAVVDMYAKAGEFADARRAFDEM 376

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             RN++SW  LI+   + G  ++A+ L  +M   G+ P+  +  S LSACG+ G    G+
Sbjct: 377 PYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHSGLTSKGM 436

Query: 420 QIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
           +    ++    ID + E   SS ID+ ++ G    A+ L + I                 
Sbjct: 437 EYFTSMMSKYGIDPRAEHY-SSAIDLLARGGQLKDAWKLVQNID---------------- 479

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
                             +E +   F   + AC   G +  G+     L +      ++ 
Sbjct: 480 ------------------IEPNSSMFGAMLGACKTHGSMPLGETAAKNLFTIAPESSVHY 521

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSE 562
              L +MYA+    + AQR    M+E
Sbjct: 522 -AVLANMYAESSLWEDAQRTRKLMAE 546


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 214/745 (28%), Positives = 365/745 (48%), Gaps = 51/745 (6%)

Query: 7    CTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            CT ++ L     +H  ++ +G   D   +  LI  YA  G+L  +R +FD+  E +  +W
Sbjct: 456  CTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIW 515

Query: 64   AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
              +I  Y  N    E+  ++ +M++     +   + S++  C +  +   G+ +H  ++K
Sbjct: 516  NSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMK 575

Query: 124  CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
               D    + T++L  Y + G  + A  +F +M  R      S+I+ Y     +S G   
Sbjct: 576  YRLDSQLSVATALLSMYAKLGDXNSAXFIFYQM-PRKTSYRDSMISGY---GIMSMGRPF 631

Query: 184  F------HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            F      H  ++ G E D    +S                                 N+ 
Sbjct: 632  FWVRLLMHLAIKTGKEFDSXLNIS---------------------------------NAL 658

Query: 238  IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
            +  YS CG L S+ + F K+  R   SW  +IS    +G  +KA+    KM + K E +L
Sbjct: 659  LAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDL 718

Query: 298  ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            +TLI+++  C     L +G ++H   I+ G   +   +  ALI  Y  CG ++  + +  
Sbjct: 719  VTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVN-ALISMYFNCGDINAGKFLFE 777

Query: 358  AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
             +  R+I+SWN LI+ Y    +  E +    QM   G  P+  ++ + L +C    +L  
Sbjct: 778  VMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCX---TLLQ 834

Query: 418  GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            G  IH   ++     E  + +SLI MY++    N    LFE   ++ + +WN+++  + Q
Sbjct: 835  GKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQ 894

Query: 477  NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
              N+ E++  F ++    +E D +TFL+ I AC  +  L     V   +I  G  K I I
Sbjct: 895  TKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVI 954

Query: 537  DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
              AL D++A+CG++  A+++F+ +S ++ VSWS MI+ YG+HG    A +L  QM  SG+
Sbjct: 955  SNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGM 1014

Query: 597  KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            KP+ +T+ ++L ACSH G +++G   FN+M   GV   ++HYACMVDLL R+G +  A+ 
Sbjct: 1015 KPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYD 1074

Query: 657  MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
             +  +P   + S+  +LL  C IH  + + + I   L      ++G Y +L NIYA  G 
Sbjct: 1075 FVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLLFELDPKNSGSYVMLYNIYAAAGR 1134

Query: 717  WDEFGKVRSIMEVTGLKKVPGYSTI 741
            W +  +VRS ME   L+K+PG+S +
Sbjct: 1135 WMDANRVRSDMEERQLRKIPGFSLV 1159



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 173/681 (25%), Positives = 327/681 (48%), Gaps = 47/681 (6%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + LF  C N+  L  L + L+V  L  D       I S   +G+   +   F+  ++P  
Sbjct: 251 LRLFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSV 310

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           F+  ++I+    +  FE+ + +Y K         +F +P V++ACS+LG +   E VH  
Sbjct: 311 FLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCI 370

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++  F+++ VIQT+++  Y + G +  AR V DK++  D+V+W+++I+ Y  N    E 
Sbjct: 371 VLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEV 430

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            ++   ++  G++P+  T  S+   C  +  L   +SIHG V++     D  L  + I M
Sbjct: 431 FEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISM 490

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+  G+L  A   F    ++    W +MIS Y ++    +A + F +ML+   +PN++T 
Sbjct: 491 YAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTF 550

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++++  C        GKS+H  +++  +  +   +  AL+  YA+ G  +    + + + 
Sbjct: 551 VSIIPCCENSANFWXGKSLHAHVMKYRLDSQLS-VATALLSMYAKLGDXNSAXFIFYQM- 608

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            R     + +IS Y    M +    + + M                              
Sbjct: 609 PRKTSYRDSMISGYGIMSMGRPFFWVRLLMH----------------------------- 639

Query: 421 IHGHVIKIDCKDEF-----VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
                + I    EF     + ++L+  YS CG  + ++ LF+++  ++ + WN++I G  
Sbjct: 640 -----LAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCV 694

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
            NG++ +A+ L H+M    +E+D VT ++ I  C     L +G  +H   I  G   D+ 
Sbjct: 695 HNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVS 754

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           +  AL  MY  CGD+   + +F+ M  R++VSW+A+I  Y  H   N+  + F QM+  G
Sbjct: 755 LVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEG 814

Query: 596 IKPNEVTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            KPN VT +N+L +C    ++ +GK  +  A+R  GV  +      ++ + +R  +I  +
Sbjct: 815 QKPNYVTLLNLLPSCX---TLLQGKSIHAFAVRT-GVIVETPIITSLISMYARFENI-NS 869

Query: 655 FKMIHSMPFPANGSIWGALLN 675
           F  +  M    + ++W A+++
Sbjct: 870 FIFLFEMGGKEDIALWNAIMS 890



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 246/567 (43%), Gaps = 94/567 (16%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P   + L L + C  + +L+P  S+   ++ R +  D  +   FI+     G    A   
Sbjct: 245 PKVTSFLRLFDLCRNIENLKPLGSV---LIVRDLMRDEYVVAEFIISCFHLGAPELALSA 301

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG-- 311
           F  IEK        MI      G F+  L  ++K   +    +  T   V+ +C+ LG  
Sbjct: 302 FEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAV 361

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
           W+ EG  VHC ++R     E   +  AL++FYA+ G+M +   V+  I + ++++WN LI
Sbjct: 362 WIAEG--VHCIVLRTAF-EENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALI 418

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-C 430
           S Y+  G  KE  E+L Q+   GL P+  + AS +  C  +  L +G  IHG V+K    
Sbjct: 419 SGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFS 478

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            DEF+  +LI MY+  G   +A  LF+   +K+VV+WNSMI  + QN  S EA  +F QM
Sbjct: 479 SDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQM 538

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               ++ + VTF++ I  C N      GK +H  ++ Y +   + + TAL  MYAK GD 
Sbjct: 539 LKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDX 598

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYG--------------MH------------------ 578
            +A  +F  M  R      +MI  YG              MH                  
Sbjct: 599 NSAXFIFYQMP-RKTSYRDSMISGYGIMSMGRPFFWVRLLMHLAIKTGKEFDSXLNISNA 657

Query: 579 --------GQLNDAASLFKQMLDSGIKP--NEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
                   G+L+ +  LF++M      P  N +++  ++  C H+G  ++     + M+ 
Sbjct: 658 LLAFYSDCGKLSSSFKLFQKM------PLRNAISWNTLISGCVHNGDTKKAVALLHKMQQ 711

Query: 629 FGVEPDL----------------------------QHYACMVDLLS-------RSGDIEG 653
             +E DL                              +AC V L++         GDI  
Sbjct: 712 EKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINA 771

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIH 680
              +   MP+ +  S W AL+ G R H
Sbjct: 772 GKFLFEVMPWRSIVS-WNALITGYRFH 797



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 198/447 (44%), Gaps = 38/447 (8%)

Query: 1    MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            +P+ R   NL +   LH + + TG   D      LI  Y   G + + + +F+       
Sbjct: 725  IPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSI 784

Query: 61   FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
              W  LI  Y ++    E +  + +MI E    +   Y ++L    S   L  G+ +H  
Sbjct: 785  VSWNALITGYRFHYLQNEVMASFCQMIXEGQKPN---YVTLLNLLPSCXTLLQGKSIHAF 841

Query: 121  IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
             ++ G   +  I TS++  Y  F  ++    +F+     D+  W++I++ Y    +  E 
Sbjct: 842  AVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKES 901

Query: 181  LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            +  F  ++   VEPD++T LSL  AC +L SL  + S+  +V+++       + N+ I +
Sbjct: 902  VTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDL 961

Query: 241  YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
            +++CG++  A++ F  +  +   SW+ MI+ Y   G  + AL    +M     +P+ IT 
Sbjct: 962  FARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITY 1021

Query: 301  ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             +VL +C+  G++ +G  +   ++ +G+        P  +E YA C              
Sbjct: 1022 ASVLSACSHGGFIDQGWMIFNSMVEEGV--------PRRMEHYA-C-------------- 1058

Query: 361  ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
                     ++    R G   EA + + ++      P    + S L AC   G+++LG +
Sbjct: 1059 ---------MVDLLGRTGQLNEAYDFVEKLPC---KPSVSLLESLLXACIIHGNVKLGEK 1106

Query: 421  IHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            I   + ++D K+      L ++Y+  G
Sbjct: 1107 ICSLLFELDPKNSGSYVMLYNIYAAAG 1133


>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 188/560 (33%), Positives = 306/560 (54%), Gaps = 20/560 (3%)

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSF-IVMYSKCGDLLSAERT 253
           + ++LSL E C  +  L+    +HG ++   +  D  PL        YS  G+L  A+  
Sbjct: 5   YNSILSLLEKCKTMAELK---RLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSV 61

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +I++     W +MI  Y+ S    +AL  + +M +    P+  T   VL +C+ +   
Sbjct: 62  FNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGY 121

Query: 314 REGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
             G+ VH  I++ G   E D Y   AL++ YA CG M    KV   I + N+++W  LI+
Sbjct: 122 NLGQCVHNCIVKTGF--EVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIA 179

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
                    EA+ +   M+ W + P+  ++ + L AC     L  G  +H    ++   D
Sbjct: 180 GCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGL-D 238

Query: 433 EF---------VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
            F         + ++++DMY+KCG    A  LF ++  +++V WNSMI  + Q G + EA
Sbjct: 239 PFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEA 298

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           ++LF  M +   + D+ TFL  I AC+++G L  G+ +H  +    +  D  I TAL DM
Sbjct: 299 LDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDM 358

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEVT 602
           YAK GD + AQ+VF  + +++V +W+++I    MHG   +A + FK+M  D+ + P+E+T
Sbjct: 359 YAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEIT 418

Query: 603 FMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           ++ +L ACSH G VE+GK +F +M+ + G+EP  QHY CMVDLLSR+G +  A +++  M
Sbjct: 419 YIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKM 478

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   N +IW ALLNGC+I++ IDV   + + +     + +G Y LLSNIYA    W+E  
Sbjct: 479 PVEPNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVK 538

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
             R +M+   ++K  G+S++
Sbjct: 539 MARELMKERKIQKSLGHSSV 558



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 249/492 (50%), Gaps = 16/492 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEP 58
           + L   C  + +L RLH  ++ T +  D    +RL++  +Y++ G+L  ++ VF+    P
Sbjct: 9   LSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRP 68

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
             ++W  +IK Y  +   +E++ +Y +M ++     +F +P VL+ACS +     G+ VH
Sbjct: 69  SLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVH 128

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I+K GF+ D    T++L  Y   G ++ A KVFD +   +VV+W+S+IA    N   S
Sbjct: 129 NCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPS 188

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV-------LRRKIKIDG 231
           E ++++  M    V P+ +TM+++  AC     L   R +H           +     + 
Sbjct: 189 EAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNV 248

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            L  + + MY+KCG L +A   F K+  R   +W +MI  YN+ G   +AL+ F  M   
Sbjct: 249 ILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIA 308

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +P+  T + V+G+CA LG L  G+++H  + +  +  +   +G AL++ YA+ G    
Sbjct: 309 GFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDD-TAIGTALVDMYAKSGDAER 367

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACG 410
            ++V   + ++++ +W  LI   A  G  +EAL    +MQ    L+PD  +    LSAC 
Sbjct: 368 AQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACS 427

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMW 467
           +VG ++ G      +  +   +   Q    ++D+ S+ G    A  L E++  + +  +W
Sbjct: 428 HVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIW 487

Query: 468 NSMI--CGFYQN 477
           ++++  C  YQN
Sbjct: 488 SALLNGCKIYQN 499


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 175/560 (31%), Positives = 305/560 (54%), Gaps = 7/560 (1%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+ EGV+ + +T L++  +  +  +LR  + IH  V   +  +D  +  + +  Y+KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  A + F  +  R   +W +MIS Y+ S    +A   F +M    E  + +T +++L +
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           C     L+ GK V   I       E D ++G ALI  YA C       +V   + ++N++
Sbjct: 121 CVNPENLQHGKHVRESISETSF--ELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLI 178

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           +W+ +I+ +A  G   EAL     MQ  G++P+  +  S L+       L+   +IH  +
Sbjct: 179 TWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLI 238

Query: 426 IKIDCKDEFVQS-SLIDMYSKC--GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            +    D    S +L+++Y +C  G  ++A ++ + + ++ +  WN +I G+  +G S E
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSRE 298

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A+  + ++ L  + +D+VTF++ + AC++   L +GK +H   +  G+  D+ +  ALT+
Sbjct: 299 ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY+KCG ++ A+R+FDSM  R+ VSW+ M+  Y  HG+  +   L ++M   G+K N +T
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGIT 418

Query: 603 FMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+++L +CSH+G + EG  YF+++    G+E   +HY C+VDLL R+G ++ A K I  M
Sbjct: 419 FVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKM 478

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P       W +LL  CR+HK +D  K   ++L      ++    +LSNIY+E G+W    
Sbjct: 479 PSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAA 538

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           K+R  M    +KKVPG S+I
Sbjct: 539 KLRRAMASRRVKKVPGISSI 558



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 265/531 (49%), Gaps = 14/531 (2%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+ E    +   + +VL +      L  G+ +H  + +     D  + T+++ TY + G 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L DARKVFD M  R V +W+S+I++Y  +    E   +F  M  EG   D VT LS+ +A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C    +L+  + +   +     ++D  +G + I MY++C    +A + F +++++   +W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           +A+I+ +   G   +AL  F  M +    PN +T I++L        L E   +H  I  
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240

Query: 326 KGMGPEYDYLGPALIEFYAEC--GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
            G+  +   +  AL+  Y  C  G++   E ++  + E+ I +WN+LI+ Y   G S+EA
Sbjct: 241 HGL-DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDM 442
           LE   ++Q   +  D  +  S L+AC +  SL  G  IH + ++     D  V+++L +M
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           YSKCG    A  +F+ +  +S V WN M+  + Q+G S E + L  +M    ++++ +TF
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA----LTDMYAKCGDLQTAQRVFD 558
           ++ + +CS+ G + +G    H L   G  + I + T     L D+  + G LQ A++   
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSL---GHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYIS 476

Query: 559 SM-SERNVVSWSAMIDCYGMHGQLNDAASLFKQM--LDSGIKPNEVTFMNI 606
            M SE  +V+W++++    +H  L+      +++  LD G     V   NI
Sbjct: 477 KMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNI 527



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 261/563 (46%), Gaps = 46/563 (8%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LRK   +H+ +  +    D   +T L+ +Y + GSL  +R VFD         W  +I  
Sbjct: 26  LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 85

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y  +    E+  ++ +M  E        + S+L AC +  +L  G+ V   I +  F+ D
Sbjct: 86  YSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELD 145

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             + T+++  Y      ++A +VF +M  +++++WS+II ++ D+    E L+ F  M +
Sbjct: 146 LFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQ 205

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC--GDL 247
           EG+ P+ VT +SL         L     IH  +    +     + N+ + +Y +C  G+L
Sbjct: 206 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGEL 265

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP-NLITLITVLGS 306
             AE    +++++  T+W  +I+ Y   G  ++ALE++ + L+++  P + +T I+VL +
Sbjct: 266 DVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETY-QRLQLEAIPVDKVTFISVLNA 324

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C     L EGK +H   +  G+  +   +  AL   Y++CG M    ++  ++  R+ +S
Sbjct: 325 CTSSTSLAEGKMIHSNAVECGLDSDV-IVKNALTNMYSKCGSMENARRIFDSMPIRSAVS 383

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ-IH--G 423
           WN ++  YA+ G S+E L+L+ +M+  G+  +  +  S LS+C + G +  G Q  H  G
Sbjct: 384 WNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLG 443

Query: 424 HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMICGFYQNGNSLE 482
           H   I+ K E     L+D+  + G    A     ++  +  +V W S+            
Sbjct: 444 HDRGIEVKTEHY-GCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASL------------ 490

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
                                  + AC     L++GK    KL+      +      L++
Sbjct: 491 -----------------------LGACRVHKDLDRGKLAARKLLELDP-GNSSASVVLSN 526

Query: 543 MYAKCGDLQTAQRVFDSMSERNV 565
           +Y++ GD + A ++  +M+ R V
Sbjct: 527 IYSERGDWKNAAKLRRAMASRRV 549



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 172/368 (46%), Gaps = 7/368 (1%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL+    +   +  T    D    T LI  YA   S  ++  VF   K+ +   W+ +I 
Sbjct: 126 NLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIIT 185

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
            +  +    E+ L Y +M++++  + N + + S+L   ++   L    ++H  I + G D
Sbjct: 186 AFADHGHCGEA-LRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244

Query: 128 KDDVIQTSILCTYG--EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
               +  +++  YG  E G LD A  +  +M  + + +W+ +I  Y  +    E L+ + 
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            +  E +  D VT +S+  AC    SL   + IH + +   +  D  + N+   MYSKCG
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG 364

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            + +A R F  +  R   SW  M+  Y + G  ++ L+   KM +   + N IT ++VL 
Sbjct: 365 SMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLS 424

Query: 306 SCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GERN 363
           SC+  G + EG +  H     +G+  + ++ G  L++     GK+ E EK I  +  E  
Sbjct: 425 SCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYG-CLVDLLGRAGKLQEAEKYISKMPSEPE 483

Query: 364 ILSWNMLI 371
           I++W  L+
Sbjct: 484 IVTWASLL 491



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 157/363 (43%), Gaps = 37/363 (10%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYA--EMGSLRSSRLVFDTFKEPDSF 61
           F + + L +L+R+H  +   GL      S  L+  Y   E G L  + ++     E    
Sbjct: 222 FTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQIT 281

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W VLI  Y  +    E++  Y ++  E   +    + SVL AC+S   L  G+ +H   
Sbjct: 282 AWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNA 341

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           ++CG D D +++ ++   Y + G +++AR++FD M  R  VSW+ ++ +Y  + +  E L
Sbjct: 342 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 401

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           K+   M +EGV+ + +T +S+  +C            H  ++    +    LG+      
Sbjct: 402 KLIRKMEQEGVKLNGITFVSVLSSCS-----------HAGLIAEGCQYFHSLGHDR---- 446

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
                          IE + T  +  ++    R+G  Q+A +   KM     EP ++T  
Sbjct: 447 --------------GIEVK-TEHYGCLVDLLGRAGKLQEAEKYISKM---PSEPEIVTWA 488

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           ++LG+C     L  GK    +++   + P        L   Y+E G      K+  A+  
Sbjct: 489 SLLGACRVHKDLDRGKLAARKLLE--LDPGNSSASVVLSNIYSERGDWKNAAKLRRAMAS 546

Query: 362 RNI 364
           R +
Sbjct: 547 RRV 549


>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/600 (31%), Positives = 326/600 (54%), Gaps = 10/600 (1%)

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           KVF  M  RDV++W+++++ Y       E ++ F  M++ G++P  V+ +++  A   + 
Sbjct: 55  KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114

Query: 211 SLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
             + A  ++G +L+   +   D  + +S I MY++ G L    + F    ++    W  M
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           I  + ++  F + +  F++ ++ +    + +T ++ L + + L  L  G+ +H   ++  
Sbjct: 175 IGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNH 234

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                  L   L+  Y+ C  +    +V   + E++++SWN +IS + + G+ +E L L+
Sbjct: 235 TVLSVTVLNAILV-MYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLV 293

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            +MQ  G + DS +V S LSA  N+ + ++G Q H ++I+   K + + S LIDMY+K G
Sbjct: 294 YEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDSYLIDMYAKSG 353

Query: 448 FKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
              ++  +FE   IQ +    WN++I G+ QNG   +A   F  M    L  + VT  + 
Sbjct: 354 LIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASI 413

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + ACS++G +  GK +H   I Y + ++I++ TAL DMY+K G +  A+ VF   SERN 
Sbjct: 414 LPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNS 473

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           V+++ MI  YG HG   +A SLF  M  SGI+P+ +TF+ +L ACS++G V+EG   F +
Sbjct: 474 VTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFES 533

Query: 626 M-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG-SIWGALLNGCRIHKRI 683
           M R F ++P   HY C+ D+L R G +  A++ +  +    +   IWG+LL  CR+H  I
Sbjct: 534 MKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHI 593

Query: 684 DVMKTIEKELSVTGTNDN--GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++ + +   L    + D   GY  LLSN+YAEE NW+   K+R  M   GL+K  G S I
Sbjct: 594 ELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSWI 653



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 285/585 (48%), Gaps = 34/585 (5%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           P   S  + +    L+  LL  G  Y  D    +  I  YAE+G L   R VFD+  E  
Sbjct: 108 PAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKS 167

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATI-SNFIYPSVLRACSSLGDLGSGEKVH 118
           + +W  +I  ++ NN F E + L+ + ++ + TI  +  + S L A S L  LG G+++H
Sbjct: 168 AEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMH 227

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +K        +  +IL  Y     +  + +VF+KM  +DVVSW+++I+ +  N    
Sbjct: 228 AFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDE 287

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           EGL + + M ++G   D VT+ SL  A   L +    +  H +++R  IK DG + +  I
Sbjct: 288 EGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDSYLI 346

Query: 239 VMYSKCGDLLSAERTFV--KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            MY+K G +  ++R F    I+ R   +W A+I+ Y ++G  ++A  +F  MLE    PN
Sbjct: 347 DMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPN 406

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +TL ++L +C+ LG +  GK +H   IR  +     ++  AL++ Y++ G ++  E V 
Sbjct: 407 AVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNI-FVRTALVDMYSKSGAINYAESVF 465

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               ERN +++  +I  Y + GM + AL L   M+  G+ PD+ +  + LSAC   G + 
Sbjct: 466 TQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVD 525

Query: 417 LGLQIHGHVIKIDCKDEFVQSS------LIDMYSKCGFKNLAYLLFERIQQKSVV--MWN 468
            GL+I    +K D K   +Q S      + DM  + G    AY   +++ ++  V  +W 
Sbjct: 526 EGLRIF-ESMKRDFK---IQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWG 581

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW-----VHH 523
           S++     +G+    I L  ++    LEM+ V  L   Q   +    E+  W     +  
Sbjct: 582 SLLGACRLHGH----IELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRK 637

Query: 524 KLISYGVRKDI---YIDTA--LTDMYAKCGDLQTAQRVFDSMSER 563
            +   G+RK++   +IDT   L    +K  D    + +++ M ER
Sbjct: 638 SMREKGLRKEVGCSWIDTGGLLVRFVSKDKDHTRCEEIYE-MLER 681



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 110/236 (46%), Gaps = 18/236 (7%)

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
           L + +F+ + ++ V+ WN+M+  + +    +EAI  F  M    ++   V+F+    A S
Sbjct: 52  LLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAIS 111

Query: 511 NIGQLEKGKWVHHKLISYG--VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           ++G  +    ++  L+  G     D+++ ++   MYA+ G L   ++VFDS  E++   W
Sbjct: 112 SVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVW 171

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDS-GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           + MI  +  +    +   LF Q + +     ++VTF++ L A S    +  G+     M 
Sbjct: 172 NTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQ----QMH 227

Query: 628 IFGVEPDLQHYACMVDLL-------SRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            F ++    H    V +L       SR   ++ +F++   MP   +   W  +++G
Sbjct: 228 AFTMK---NHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMP-EKDVVSWNTMISG 279


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 168/444 (37%), Positives = 271/444 (61%), Gaps = 4/444 (0%)

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++++L +CA  G +  G++VH   ++  +  +  +    L++ YA+CG +     V   +
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCN-TLLDMYAKCGVLDGAILVFDLM 59

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
             R +++W  LI+ YAR+G+S EA+ L  +M   G+ PD F++ + L AC   GSL+ G 
Sbjct: 60  SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK 119

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H ++ + D +   FV ++L+DMY+KCG    A  +F  +  K ++ WN+MI G+ +N 
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA++LF  M L  ++ D  T    + AC+++  L++GK VH  ++  G   D  +  
Sbjct: 180 LPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN 238

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           AL DMY KCG    A+ +FD +  +++++W+ MI  YGMHG  N+A + F +M  +GI+P
Sbjct: 239 ALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298

Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           +EV+F++IL+ACSHSG ++EG  +FN M+    V+P L+HYAC+VDLL+RSG +  A+K 
Sbjct: 299 DEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I SMP   + +IWGALL+GCRIH  + + + + + +      + GYY LL+N YAE   W
Sbjct: 359 IKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKW 418

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           +E  K+R  +   GLKK PG S I
Sbjct: 419 EEVKKLRQKIGRRGLKKNPGCSWI 442



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 213/413 (51%), Gaps = 9/413 (2%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           M+S+ +AC     +   R++HG  ++  +       N+ + MY+KCG L  A   F  + 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
            R   +WT++I+ Y R G   +A+  F +M      P++ T+ TVL +CA  G L  GK 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           VH   IR+       ++  AL++ YA+CG M +   V   +  ++I+SWN +I  Y++  
Sbjct: 121 VH-NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQS 437
           +  EAL L   M    + PD  ++A  L AC ++ SL  G ++HGH+++     D+ V +
Sbjct: 180 LPNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN 238

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           +L+DMY KCG   LA LLF+ I  K ++ W  MI G+  +G    AI  F++M    +E 
Sbjct: 239 ALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           DEV+F++ + ACS+ G L++G W    ++     V+  +     + D+ A+ G L  A +
Sbjct: 299 DEVSFISILYACSHSGLLDEG-WRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357

Query: 556 VFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
              SM  E +   W A++    +H  +  A  + + + +  ++P    +  +L
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFE--LEPENTGYYVLL 408



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 196/379 (51%), Gaps = 9/379 (2%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L+AC++ GD+  G  VHG  +K           ++L  Y + G LD A  VFD M+ R
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
            VV+W+S+IA+Y       E +++FH M REGV PD  T+ ++  AC    SL   + +H
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
            ++    ++ +  + N+ + MY+KCG +  A   F+++  +   SW  MI  Y+++    
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182

Query: 280 KALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           +AL  F  M LE+K  P+  TL  +L +CA L  L  GK VH  I+R G   +   +  A
Sbjct: 183 EALSLFGDMVLEMK--PDGTTLACILPACASLASLDRGKEVHGHILRNGFFSD-QQVANA 239

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L++ Y +CG       +   I  +++++W ++I+ Y   G    A+    +M+  G+ PD
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQ-SSLIDMYSKCGFKNLAYLL 455
             S  S L AC + G L  G +   +V++ +C  K +    + ++D+ ++ G   +AY  
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFF-NVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358

Query: 456 FERIQ-QKSVVMWNSMICG 473
            + +  +    +W +++ G
Sbjct: 359 IKSMPIEPDATIWGALLSG 377



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 187/375 (49%), Gaps = 7/375 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C N   ++    +H   +   +H+       L++ YA+ G L  + LVFD      
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  Y      +E+I L+H+M RE  +   F   +VL AC+  G L +G+ VH 
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I +     +  +  +++  Y + G ++DA  VF +M  +D++SW+++I  Y  N+  +E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  MV E ++PD  T+  +  AC  L SL   + +HGH+LR     D  + N+ + 
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY KCG  + A   F  I  +   +WT MI+ Y   G+   A+ +F +M +   EP+ ++
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302

Query: 300 LITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            I++L +C+  G L EG +  +       + P+ ++    +++  A  GK++   K I +
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYA-CIVDLLARSGKLAMAYKFIKS 361

Query: 359 IG-ERNILSWNMLIS 372
           +  E +   W  L+S
Sbjct: 362 MPIEPDATIWGALLS 376


>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 675

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 216/708 (30%), Positives = 342/708 (48%), Gaps = 111/708 (15%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS-ILCTYGEFGCLDDARKVFDKM 156
           Y  +L++CS+        + +G  +K GF    VI  + +L  Y   G +  AR +FD+M
Sbjct: 9   YVRLLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEM 68

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             R+  SW+++I  Y ++ D    L+ F  M                          P R
Sbjct: 69  PERNYFSWNTMIEGYMNSGDKGTSLRFFDMM--------------------------PER 102

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
                        DG   N  I  ++K G+L  A R F  + ++   +  +++  Y  +G
Sbjct: 103 -------------DGYSWNVVISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNG 149

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG--------- 327
           + ++AL  F    E+K   + ITL TVL +CA L  L+ GK +H QI+  G         
Sbjct: 150 YSEEALRLFK---ELKFSADAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNS 206

Query: 328 ---------------------MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
                                +G   D+    LI  YA CG+++E  ++      R ++ 
Sbjct: 207 SLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVIL 266

Query: 367 WNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           WN +IS Y    M  EAL L  +M  +TW    DS ++A+ ++AC  +G L+ G Q+H H
Sbjct: 267 WNSMISGYIANNMKFEALVLFNEMRNETW---EDSRTLAAVINACIGLGFLETGKQMHCH 323

Query: 425 VIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI------------------------ 459
             K    D+  V S+L+DMYSKCG    A  LF  +                        
Sbjct: 324 ACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDA 383

Query: 460 -------QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
                  + KS++ WNSM  GF QNG  +E +  F QM+   L  DEV+  + I AC++I
Sbjct: 384 KRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASI 443

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L  G+ V  +    G+  D  + ++L D+Y KCG ++  +RVFD+M + + V W++MI
Sbjct: 444 SSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMI 503

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGV 631
             Y  +G   +A  LFK+M  +GI+P ++TFM +L AC++ G VEEG+  F AM++  G 
Sbjct: 504 SGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGF 563

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            PD +H++CMVDLL+R+G +E A  ++  MPF A+ S+W ++L GC  +    + K + +
Sbjct: 564 VPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVAE 623

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++      ++  Y  LS I+A  G+W+    VR +M    + K PG S
Sbjct: 624 KIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVSKNPGSS 671



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 160/639 (25%), Positives = 288/639 (45%), Gaps = 113/639 (17%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L +SC+N  + T   + +   L  G +      +  L++ Y+  G +  +R +FD   E 
Sbjct: 12  LLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEMPER 71

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + F W  +I+ YM N+  + + L +  M+ E                             
Sbjct: 72  NYFSWNTMIEGYM-NSGDKGTSLRFFDMMPE----------------------------- 101

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
                    +D      ++  + + G L  AR++FD M  +DVV+ +S++  Y  N    
Sbjct: 102 ---------RDGYSWNVVISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSE 152

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L++F  +       D +T+ ++ +AC EL +L+  + IH  +L   ++ D  + +S +
Sbjct: 153 EALRLFKEL---KFSADAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLV 209

Query: 239 VMYSKCGDLLSA-------------------------------ERTFVKIEKRCTTSWTA 267
            +Y+KCGDL  A                                R F +   RC   W +
Sbjct: 210 NVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVILWNS 269

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MIS Y  +    +AL  F +M     E +  TL  V+ +C GLG+L  GK +HC   + G
Sbjct: 270 MISGYIANNMKFEALVLFNEMRNETWEDSR-TLAAVINACIGLGFLETGKQMHCHACKFG 328

Query: 328 MGPE-----------------------------YD-YLGPALIEFYAECGKMSECEKVIH 357
           +  +                             YD  L  ++I+ Y  CG++ + ++V  
Sbjct: 329 LVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 388

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            I  ++++SWN + + +++ G   E LE   QM    L  D  S++S +SAC ++ SL L
Sbjct: 389 RIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGL 448

Query: 418 GLQIHGH--VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
           G Q+     ++ +D  D+ V SSLID+Y KCG       +F+ + +   V WNSMI G+ 
Sbjct: 449 GEQVFARATIVGLD-SDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYA 507

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDI 534
            NG+  EAI+LF +M +  +   ++TF+  + AC+  G +E+G+ +   + + +G   D 
Sbjct: 508 TNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDK 567

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
              + + D+ A+ G ++ A  + + M  + +   WS+++
Sbjct: 568 EHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVL 606



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 4/183 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++ A   + GL  D   S+ LI+ Y + GS+ + R VFDT  + D   W  +I  Y  N 
Sbjct: 451 QVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNG 510

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI-IKCGFDKDDVIQ 133
              E+I L+ KM       +   +  VL AC+  G +  G  +   + +  GF  D    
Sbjct: 511 HGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHF 570

Query: 134 TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           + ++      G +++A  + ++M    D   WSS++     N   + G K+   ++   +
Sbjct: 571 SCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVAEKIIE--L 628

Query: 193 EPD 195
           EP+
Sbjct: 629 EPE 631


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 180/535 (33%), Positives = 276/535 (51%), Gaps = 3/535 (0%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L EACG++ SL   R  H  + R        L NS + MY KCG L  A + F ++ +R 
Sbjct: 16  LFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERN 75

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SW  +IS Y  +G F K    F  MLE++ +PN  T I  L S      L  GK +H 
Sbjct: 76  LVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHS 135

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             IR G+G     +  A+   Y +CG +   E V   + E+N ++W  ++  Y +     
Sbjct: 136 HAIRSGLGSNAS-VNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQM 194

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
           +AL L  +M   G+  D +  +  L AC  +  L  G QIHGH++K+  + E  V + L+
Sbjct: 195 DALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLV 254

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           D Y KC     A   FE I + + V W+++I G+ Q G   EA+  F  +    ++++  
Sbjct: 255 DFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSF 314

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T+ +  QACS +     G   H   I   +    + ++A+  MY++CG L  A RVF+S+
Sbjct: 315 TYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESI 374

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            + + V+W+A+I  Y   G   +A  LF++M D G++PN VTF+ +L ACSHSG V EG+
Sbjct: 375 DDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGR 434

Query: 621 FYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            Y  +M   +GV   + HY CMVD+ SR+G ++ A ++I SMPF  +   W  LL GC  
Sbjct: 435 QYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWT 494

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           ++ +++ +   + L      D   Y L+ N+YA  G W E   VR +M    L+K
Sbjct: 495 YRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRK 549



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 242/484 (50%), Gaps = 4/484 (0%)

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
           ++S   Y  +  AC  +  L  G   H ++ +   +  + ++ S+L  Y + G L DARK
Sbjct: 7   SVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARK 66

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VFD+M  R++VSW++II++Y +N    +G  MF +M+    +P+  T +    +      
Sbjct: 67  VFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSG 126

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   + IH H +R  +  +  +  +   MY KCG L  AE  F K+ ++   +WT ++  
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y ++     AL  F KM+    E +      VL +CAGL  L  G+ +H  I++ G+  E
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G  L++FY +C  +    K    I E N +SW+ LI+ Y + G  +EAL+    ++
Sbjct: 247 VS-VGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLR 305

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKN 450
           T  +  +SF+  S   AC  +     G Q H   IK      +  +S++I MYS+CG  +
Sbjct: 306 TRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLD 365

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +FE I     V W ++I G+   GN+ EA+ LF +M    +  + VTF+  + ACS
Sbjct: 366 YATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACS 425

Query: 511 NIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSW 568
           + G + +G+     + S YGV   I     + D+Y++ G LQ A  +  SM    + +SW
Sbjct: 426 HSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSW 485

Query: 569 SAMI 572
             ++
Sbjct: 486 KCLL 489



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 240/502 (47%), Gaps = 23/502 (4%)

Query: 3   LFRSCTNLRKL--TRLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEP 58
           LF +C  ++ L   RL  H  +     +PP      +++ Y + GSL  +R VFD  +E 
Sbjct: 16  LFEACGKIKSLFDGRLF-HEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRER 74

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   W  +I  Y  N  F++   ++  M+  +   +   Y   LR+  +   L  G+++H
Sbjct: 75  NLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIH 134

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              I+ G   +  + T+I   Y + G L+ A  VF+KM+ ++ V+W+ I+  Y       
Sbjct: 135 SHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQM 194

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + L +F  MV EGVE D      + +AC  L  L   R IHGH+++  ++ +  +G   +
Sbjct: 195 DALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLV 254

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             Y KC +L SA + F  I +    SW+A+I+ Y + G F++AL++F  +     + N  
Sbjct: 255 DFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSF 314

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  ++  +C+ L     G   H   I+  +   Y +   A+I  Y+ CG++    +V  +
Sbjct: 315 TYTSIFQACSALADFNSGAQAHADAIKSSL-VAYQHGESAMITMYSRCGRLDYATRVFES 373

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I + + ++W  +I+ YA +G + EAL+L  +MQ  G+ P++ +  + L+AC + G +  G
Sbjct: 374 IDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEG 433

Query: 419 LQI-------HGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM-WNSM 470
            Q        +G    ID  D      ++D+YS+ GF   A  L   +      M W  +
Sbjct: 434 RQYLESMSSNYGVATTIDHYD-----CMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCL 488

Query: 471 ICGFYQNGN----SLEAINLFH 488
           + G +   N     L A NLF 
Sbjct: 489 LGGCWTYRNLEIGELAAENLFQ 510


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 171/498 (34%), Positives = 277/498 (55%), Gaps = 2/498 (0%)

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           GD+  A + F ++ +     W A+I  Y +       +  ++ M   +  PN  T + VL
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C G      GK +H Q  + G G    ++  +L+  YA+ G++S    V   + +R +
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNV-FVQNSLVSMYAKFGQISYARIVFDKLHDRTV 151

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SW  +IS Y + G   EAL +  +M+   + PD  ++ S ++A  NV  L  G  IHG 
Sbjct: 152 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 211

Query: 425 VIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           V K+  + E  +  SL  MY+K G   +A   F R+++ ++++WN+MI G+  NG   EA
Sbjct: 212 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 271

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           I LF +M    + +D +T  +A+ A + +G LE  +W+   +     R D +++T L DM
Sbjct: 272 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 331

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG +  A+ VFD +++++VV WS MI  YG+HG   +A  L+ +M  +G+ PN+ TF
Sbjct: 332 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 391

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           + +L AC +SG V+EG   F+ M   G+EP  QHY+C+VDLL R+G +  A+  I SMP 
Sbjct: 392 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 451

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
               S+WGALL+ C+IH+++ + +   ++L +    + G+Y  LSN+YA    W     V
Sbjct: 452 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 511

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R +M   GL K  G+S+I
Sbjct: 512 RLMMTQKGLNKDLGHSSI 529



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 235/464 (50%), Gaps = 5/464 (1%)

Query: 11  RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
           + L +++  L+V+GLH       + I +    G +  +   F    EPD  +W  +IK Y
Sbjct: 1   KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 60

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
              N  +  I +Y  M   Q   + F +  VL+AC      G G+++HG+  K GF  + 
Sbjct: 61  TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 120

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            +Q S++  Y +FG +  AR VFDK+  R VVSW+SII+ Y  N D  E L +F  M + 
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 180

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
            V+PD++ ++S+  A   +  L   +SIHG V +  ++ +  +  S   MY+K G +  A
Sbjct: 181 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 240

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              F ++EK     W AMIS Y  +G+ ++A++ F +M+      + IT+ + + + A +
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
           G L   + +    I K    +  ++   LI+ YA+CG +     V   + +++++ W+++
Sbjct: 301 GSLELARWLD-GYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 359

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           I  Y   G  +EA+ L  +M+  G+ P+  +    L+AC N G ++ G ++  H++    
Sbjct: 360 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDHG 418

Query: 431 KDEFVQ--SSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMI 471
            +   Q  S ++D+  + G+ N AY  +     +  V +W +++
Sbjct: 419 IEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALL 462



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 124/246 (50%), Gaps = 1/246 (0%)

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           K  F+    I+     G  N A+  F  + +  +++WN++I G+ Q       I ++  M
Sbjct: 17  KCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM 76

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            ++ +  +  TFL  ++AC        GK +H +   YG   ++++  +L  MYAK G +
Sbjct: 77  QISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQI 136

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ VFD + +R VVSW+++I  Y  +G   +A ++FK+M    +KP+ +  ++++ A 
Sbjct: 137 SYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAY 196

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           ++   + +GK     +   G+E +      +  + ++ G +E A    + M  P N  +W
Sbjct: 197 TNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKP-NLILW 255

Query: 671 GALLNG 676
            A+++G
Sbjct: 256 NAMISG 261



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 9/230 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           M  + +  +L +   +H  +   GL ++P     L   YA+ G +  +R  F+  ++P+ 
Sbjct: 193 MTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNL 252

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +W  +I  Y  N + EE+I L+ +MI +   + +    S + A + +G L     + G 
Sbjct: 253 ILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGY 312

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I K  +  D  + T ++  Y + G +  AR VFD++  +DVV WS +I  Y  +    E 
Sbjct: 313 ISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEA 372

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACG---------ELCSLRPARSIHGH 221
           + +++ M + GV P+  T + L  AC          EL  L P   I  H
Sbjct: 373 ICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPH 422



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           V+ +LI  G+ K  ++     +     GD+  A + F  +SE +++ W+A+I  Y     
Sbjct: 6   VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 65

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
           ++    ++  M  S + PN  TF+ +L AC  +     GK        +G   ++     
Sbjct: 66  VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNS 125

Query: 641 MVDLLSRSGDIEGA---FKMIHSMPFPANGSIWGALLNG 676
           +V + ++ G I  A   F  +H     +    W ++++G
Sbjct: 126 LVSMYAKFGQISYARIVFDKLHDRTVVS----WTSIISG 160


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 178/531 (33%), Positives = 300/531 (56%), Gaps = 4/531 (0%)

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           LR  + +H  ++         L N  + MYSKCG+L  A + F  + +R   SWTAMIS 
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            +++  F +A+ +F  M    E P      + + +CA LG +  GK +HC  ++ G+G E
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             ++G  L + Y++CG M +  KV   +  ++ +SW  +I  Y++ G  +EAL    +M 
Sbjct: 141 L-FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKN 450
              +  D   + S+L ACG + + + G  +H  V+K+  + D FV ++L DMYSK G   
Sbjct: 200 DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259

Query: 451 LAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            A  +F    + ++VV +  +I G+ +     + +++F ++    +E +E TF + I+AC
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +N   LE+G  +H +++     +D ++ + L DMY KCG L+ A + FD + +   ++W+
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWN 379

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           +++  +G HG   DA  +F++M+D G+KPN +TF+++L  CSH+G VEEG  YF +M + 
Sbjct: 380 SLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT 439

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           +GV P  +HY+C++DLL R+G ++ A + I+ MPF  N   W + L  CRIH   ++ K 
Sbjct: 440 YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKL 499

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             ++L      ++G   LLSNIYA E  W++   VR  M    +KK+PGYS
Sbjct: 500 AAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYS 550



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 261/499 (52%), Gaps = 12/499 (2%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+R+   +++     V++  +    L  G+++H  +I  G+     +   ++  Y + G 
Sbjct: 1   MLRDTNALAH-----VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE 55

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           LD A K+FD M  R++VSW+++I+    N+  SE ++ F  M   G  P      S   A
Sbjct: 56  LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRA 115

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C  L S+   + +H   L+  I  +  +G++   MYSKCG +  A + F ++  +   SW
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 175

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           TAMI  Y++ G F++AL +F KM++ +   +   L + LG+C  L   + G+SVH  +++
Sbjct: 176 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVK 235

Query: 326 KGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGMSKEA 383
             +G E D ++G AL + Y++ G M     V     E RN++S+  LI  Y      ++ 
Sbjct: 236 --LGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKG 293

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDM 442
           L + V+++  G+ P+ F+ +S + AC N  +L+ G Q+H  V+KI+  +D FV S L+DM
Sbjct: 294 LSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDM 353

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y KCG    A   F+ I   + + WNS++  F Q+G   +AI +F +M    ++ + +TF
Sbjct: 354 YGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITF 413

Query: 503 LTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           ++ +  CS+ G +E+G  + +    +YGV       + + D+  + G L+ A+   + M 
Sbjct: 414 ISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP 473

Query: 562 -ERNVVSWSAMIDCYGMHG 579
            E N   W + +    +HG
Sbjct: 474 FEPNAFGWCSFLGACRIHG 492



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 213/413 (51%), Gaps = 6/413 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           LR+  +LHA L+  G  Y P    +  L+  Y++ G L  +  +FDT  + +   W  +I
Sbjct: 21  LRRGKQLHALLICAG--YTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
                N+ F E+I  +  M       + F + S +RAC+SLG +  G+++H   +K G  
Sbjct: 79  SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG 138

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            +  + +++   Y + G + DA KVF++M  +D VSW+++I  Y    +  E L  F  M
Sbjct: 139 SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           + E V  D   + S   ACG L + +  RS+H  V++   + D  +GN+   MYSK GD+
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDM 258

Query: 248 LSAERTF-VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
            SA   F +  E R   S+T +I  Y  +   +K L  FV++     EPN  T  +++ +
Sbjct: 259 ESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA 318

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA    L +G  +H Q+++     E  ++   L++ Y +CG + +  +    IG+   ++
Sbjct: 319 CANQAALEQGTQLHAQVMKINF-DEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA 377

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           WN L+S + + G+ K+A+++  +M   G+ P++ +  S L+ C + G ++ GL
Sbjct: 378 WNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---KIDCKDEFVQSSLIDMYSKCGFKNL 451
           ++ D+ ++A  +        L+ G Q+H  +I      C   F+ + L++MYSKCG  + 
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCT--FLTNHLVNMYSKCGELDH 58

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  LF+ + Q+++V W +MI G  QN    EAI  F  M +      +  F +AI+AC++
Sbjct: 59  ALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G +E GK +H   + +G+  ++++ + L DMY+KCG +  A +VF+ M  ++ VSW+AM
Sbjct: 119 LGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           ID Y   G+  +A   FK+M+D  +  ++    + L AC    + + G+   +++   G 
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           E D+     + D+ S++GD+E A     S  F  +      +   C I   ++  + IEK
Sbjct: 239 ESDIFVGNALTDMYSKAGDMESA-----SNVFGIDSECRNVVSYTCLIDGYVET-EQIEK 292

Query: 692 ELSV 695
            LSV
Sbjct: 293 GLSV 296


>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 1024

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 175/531 (32%), Positives = 289/531 (54%), Gaps = 35/531 (6%)

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           GDL  A   F ++E+  T  W  MI  Y  +     A   FV M +++ E +  + +  L
Sbjct: 205 GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFAL 264

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C     + EG+SV+C + + G   E   +   LI FYAE G +    +V     ++++
Sbjct: 265 KACQQFETVFEGESVYCVVWKMGFDCEL-LVRNGLIHFYAERGLLKNARQVFDESSDKDV 323

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           ++W  +I  YA    S+EA+E+   M    + P+  ++ + +SAC ++G+L++G ++H  
Sbjct: 324 VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEK 383

Query: 425 V-------------------IKIDC-------------KDEFVQSSLIDMYSKCGFKNLA 452
           V                   +K DC             KD +  +S+++ Y+KCG    A
Sbjct: 384 VEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESA 443

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
              F++  +K+ V W++MI G+ QN    E++ LFH+M    +   E T ++ + AC  +
Sbjct: 444 RRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 503

Query: 513 GQLEKGKWVHHK-LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
             L  G W+H   ++   +   + ++ A+ DMYAKCG +  A  VF +M ERN++SW+ M
Sbjct: 504 TCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTM 563

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
           I  Y  +G+   A ++F QM + G +PN +TF+++L ACSH G + EG+ YF+ M R +G
Sbjct: 564 IAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYG 623

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           ++P+  HYACMVDLL R+G +E A+K+I +MP     + WGALLN CR+H  +++ +   
Sbjct: 624 IKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSA 683

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             L      D+G Y LL+N  A +  W +  +VRS+M+  G+KK+PGYS I
Sbjct: 684 HNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLI 734



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 275/568 (48%), Gaps = 41/568 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGL--HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +  SC+ +R+L ++ A + +TG+  H  P +      + A  G L  +  +F+  ++P++
Sbjct: 163 IMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNT 222

Query: 61  FMWAVLIKCYM--WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           FMW  +I+ Y       F  S  +Y   +R +    +F++   L+AC     +  GE V+
Sbjct: 223 FMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVF--ALKACQQFETVFEGESVY 280

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             + K GFD + +++  ++  Y E G L +AR+VFD+ + +DVV+W+++I  Y  +    
Sbjct: 281 CVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSE 340

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E +++F  M+   VEP+ VT++++  AC ++ +L   + +H  V  + ++    L N+ +
Sbjct: 341 EAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALL 400

Query: 239 VMY-------------------------------SKCGDLLSAERTFVKIEKRCTTSWTA 267
            MY                               +KCGDL SA R F +  ++    W+A
Sbjct: 401 DMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSA 460

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI+ Y+++   +++L+ F +M+E    P   TL++VL +C  L  L  G  +H   +   
Sbjct: 461 MIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGK 520

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           + P    L  A+++ YA+CG +    +V   + ERN++SWN +I+ YA  G +K+A+ + 
Sbjct: 521 IIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVF 580

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCKDEFVQ-SSLIDMYSK 445
            QM+  G  P++ +  S L+AC + G +  G +   ++  K   K E    + ++D+  +
Sbjct: 581 DQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGR 640

Query: 446 CGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
            G    AY L   +  Q     W +++     +GN +E   L     L     D   ++ 
Sbjct: 641 TGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGN-VELARLSAHNLLRLDPEDSGIYVL 699

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRK 532
               C+N  +    + V   +   GV+K
Sbjct: 700 LANTCANDRKWSDVRRVRSLMKDKGVKK 727


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 188/644 (29%), Positives = 342/644 (53%), Gaps = 18/644 (2%)

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           C+S+  L   +++H R I  GF ++  + + ++  Y   G L+ + +VF  +   ++  +
Sbjct: 37  CNSIQHL---QQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLF 93

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
           ++I+ +     +    L ++  MV + + PD  T   +  +C    ++   R+IHG++++
Sbjct: 94  NAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVK 153

Query: 225 RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS--WTAMISC---YNRSGWFQ 279
               +   +  +   MY +C +  +A + F   +KR      W + ++     N +G  +
Sbjct: 154 LGFDLFDVVATALAEMYEECIEFENAHQLF---DKRSVKDLGWPSSLTTEGPQNDNG--E 208

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
                F +M+  +  P+  T   +L   AGL  ++  K VHC  I   +  +   +  A+
Sbjct: 209 GIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDL-LVNTAV 267

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           +  Y++   + +  K+   + E++ + WN++I+ YAR+G   E LEL   M   G+  D 
Sbjct: 268 LSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDL 327

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFER 458
           F+    +S+   +  +  G Q H H+++     +  V +SLIDMY +C   + A  +F  
Sbjct: 328 FTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNW 387

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  KSV+ W++MI G+ +NG SL A++LF +M  + ++ D V  +  + A  +IG LE  
Sbjct: 388 MTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENV 447

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD--SMSERNVVSWSAMIDCYG 576
           K++H   +  G+     ++TAL   YAKCG ++ AQR+F+   + +++++ W++MI  + 
Sbjct: 448 KYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHA 507

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDL 635
            HG  +    L+ +M  S  KP++VTF+ +L AC +SG VE+GK +F  M   +G +P  
Sbjct: 508 NHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQ 567

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HYACMV+LL R+G I  A +++ +MP   +  +WG LL+ C++H    + +   ++L  
Sbjct: 568 EHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLIN 627

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
               + G Y LLSNIYA  G WD   K+RS +   GLKK+PG S
Sbjct: 628 MEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCS 671



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 186/663 (28%), Positives = 333/663 (50%), Gaps = 48/663 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF  C +++ L ++HA  ++ G H +P  S++LI+ YA +G L  S  VF +  +P+  +
Sbjct: 33  LFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTL 92

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           +  +++        E ++L+Y +M+ +        YP VLR+CSS  ++G G  +HG ++
Sbjct: 93  FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL- 181
           K GFD  DV+ T++   Y E    ++A ++FDK + +D + W S + +     D  EG+ 
Sbjct: 153 KLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKD-LGWPSSLTTEGPQNDNGEGIF 211

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  M+ E + PD  T  +L      L S++ A+ +H   +  K+  D  +  + + +Y
Sbjct: 212 RVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLY 271

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           SK   L+ A + F K+ ++    W  MI+ Y R G   + LE F  M       +L T +
Sbjct: 272 SKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTAL 331

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            V+ S A L  +  GK  H  I+R G   +   +  +LI+ Y EC  +    K+ + + +
Sbjct: 332 PVISSIAQLKCVDWGKQTHAHILRNGSDSQVS-VHNSLIDMYCECKILDSACKIFNWMTD 390

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++++SW+ +I  Y + G S  AL L  +M++ G+  D   + + L A  ++G+L+    +
Sbjct: 391 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL 450

Query: 422 HGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLF--ERIQQKSVVMWNSMICGFYQNG 478
           HG+ +K+       + ++L+  Y+KCG   +A  LF  E+I  K ++MWNSMI     +G
Sbjct: 451 HGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 510

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYID 537
           +  +   L+++M  +  + D+VTFL  + AC N G +EKGK    ++  SYG        
Sbjct: 511 DWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGC------- 563

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
                        Q +Q             ++ M++  G  G +++A  L K M    IK
Sbjct: 564 -------------QPSQE-----------HYACMVNLLGRAGLISEAGELVKNM---PIK 596

Query: 598 PNEVTFMNILWACS-HSGS-VEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGA 654
           P+   +  +L AC  H GS + E    F A ++  +EP +  +Y  + ++ + +G  +G 
Sbjct: 597 PDARVWGPLLSACKMHPGSKLAE----FAAEKLINMEPRNAGNYILLSNIYAAAGKWDGV 652

Query: 655 FKM 657
            KM
Sbjct: 653 AKM 655



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK--EP 58
           +P F     L  +  LH + +  GL   P  +T L+ +YA+ GS+  ++ +F+  K  + 
Sbjct: 435 LPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDK 494

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           D  MW  +I  +  +  + +   LY++M    +      +  +L AC + G +  G++
Sbjct: 495 DLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKE 552


>gi|302754104|ref|XP_002960476.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
 gi|300171415|gb|EFJ38015.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
          Length = 672

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 194/653 (29%), Positives = 338/653 (51%), Gaps = 13/653 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L++ Y + GSLR +   F T +E + F W + +  +  N    ++I L+  M  +   + 
Sbjct: 26  LVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTAFAQNGDPRQAIHLFQAMCLDGVELD 85

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              + + + ACSSLGDL +G  +H  I    F  D V++ S++  Y + G    A  +F 
Sbjct: 86  RVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEDLFQ 145

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           ++  ++ V+++++IA+Y       E L ++ +M  EGV PD V MLS   AC    S   
Sbjct: 146 RLKPKNAVAYTALIAAYSQFKMGREALGLYRAMHLEGVAPDKVAMLSALGACA---SEPD 202

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV--KIEKRCTTSWTAMISCY 272
            R+IH  +       D  + ++ + MY +   L SA+  F   ++ +     W +MIS Y
Sbjct: 203 GRAIHACITCCGSDGDDTVASALVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSMISAY 262

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            +SG  ++ALE F KM      P+++T++ +LG C+ L  L + + +H Q+ R  +  + 
Sbjct: 263 VQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVLRKLDKARMIHAQL-RARVDADT 321

Query: 333 DYLGPALIEFYAECGKMSECEKVIH--AIGERNILSWNMLISEYARKGMSKEALELLVQM 390
             +  +L+  Y EC  + +   V    A G R+ ++WN +I+ YA  G    AL+L   M
Sbjct: 322 AVV-DSLLNVYRECRSLEDAVTVFREEAGGARDCVAWNTMIAAYAECGDPGMALKLFTLM 380

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGF 448
              G+ P   +  + L A  ++G+L  G  +H H I+    DE  FV +SL+  Y  CG 
Sbjct: 381 DLHGVEPTEVTYVAVLGAASSLGALTRGASLH-HRIRSCGLDELPFVSNSLMQFYGSCGR 439

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + A  +F  ++++  V WN+++  + Q+G    A+ +FH M L  +  + +T    + A
Sbjct: 440 LSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALAVFHGMELEGVRANVITLTNVVTA 499

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+  G    GK +H +++S G+     + +AL  MY K G L  A   F+ +S +N VSW
Sbjct: 500 CTVTGDAAIGKSIHARVLSMGLEHHSAVGSALVAMYGKFGMLDRAVSCFNDISAKNTVSW 559

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF-NAMR 627
           +A++  +   GQ  +   L + M   G++ +  T++ +L+ACSH G VEE    F N + 
Sbjct: 560 NALMTGFAQQGQSVETVQLSRAMQLQGMESDGATYLVVLFACSHGGLVEEALSCFSNLVE 619

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
              V  + +HY C++DLL+R+G ++ A  +  SMPF  + + W +L+  C++H
Sbjct: 620 DGSVSVNDEHYGCLIDLLARAGWLDRAEDLFRSMPFEPDSTSWMSLVGACKLH 672



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 281/571 (49%), Gaps = 11/571 (1%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L  G+ +H ++ K G+ ++  +   ++  YG+ G L DA   F  +  R++ +W+  + +
Sbjct: 1   LEQGKTIHEQMSKDGYARETYLGNLLVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTA 60

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +  N D  + + +F +M  +GVE D V   +   AC  L  L   RS+H  +     + D
Sbjct: 61  FAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSD 120

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             L  S I MY+K G+   AE  F +++ +   ++TA+I+ Y++    ++AL  +  M  
Sbjct: 121 AVLRVSLINMYAKAGEFALAEDLFQRLKPKNAVAYTALIAAYSQFKMGREALGLYRAMHL 180

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               P+ + +++ LG+CA      +G+++H  I   G   + D +  AL+  Y     + 
Sbjct: 181 EGVAPDKVAMLSALGACAS---EPDGRAIHACITCCGSDGD-DTVASALVSMYGRFQMLE 236

Query: 351 ECEKVI--HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
             + V     +   ++  WN +IS Y + G  +EALEL  +M+  G+ PD  ++   L  
Sbjct: 237 SAKSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGV 296

Query: 409 CGNVGSLQLGLQIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLF--ERIQQKSVV 465
           C  +  L     IH  +  ++D  D  V  SL+++Y +C     A  +F  E    +  V
Sbjct: 297 CSVLRKLDKARMIHAQLRARVD-ADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCV 355

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN+MI  + + G+   A+ LF  M L+ +E  EVT++  + A S++G L +G  +HH++
Sbjct: 356 AWNTMIAAYAECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRI 415

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
            S G+ +  ++  +L   Y  CG L +A  VF S+  R+ VSW+ ++  Y  HG  + A 
Sbjct: 416 RSCGLDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTAL 475

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLL 645
           ++F  M   G++ N +T  N++ AC+ +G    GK     +   G+E      + +V + 
Sbjct: 476 AVFHGMELEGVRANVITLTNVVTACTVTGDAAIGKSIHARVLSMGLEHHSAVGSALVAMY 535

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            + G ++ A    + +    N   W AL+ G
Sbjct: 536 GKFGMLDRAVSCFNDIS-AKNTVSWNALMTG 565


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 171/498 (34%), Positives = 277/498 (55%), Gaps = 2/498 (0%)

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           GD+  A + F ++ +     W A+I  Y +       +  ++ M   +  PN  T + VL
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            +C G      GK +H Q  + G G    ++  +L+  YA+ G++S    V   + +R +
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNV-FVQNSLVSMYAKFGQISYARIVFDKLHDRTV 166

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SW  +IS Y + G   EAL +  +M+   + PD  ++ S ++A  NV  L  G  IHG 
Sbjct: 167 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 226

Query: 425 VIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           V K+  + E  +  SL  MY+K G   +A   F R+++ ++++WN+MI G+  NG   EA
Sbjct: 227 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 286

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           I LF +M    + +D +T  +A+ A + +G LE  +W+   +     R D +++T L DM
Sbjct: 287 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 346

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG +  A+ VFD +++++VV WS MI  YG+HG   +A  L+ +M  +G+ PN+ TF
Sbjct: 347 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 406

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
           + +L AC +SG V+EG   F+ M   G+EP  QHY+C+VDLL R+G +  A+  I SMP 
Sbjct: 407 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 466

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
               S+WGALL+ C+IH+++ + +   ++L +    + G+Y  LSN+YA    W     V
Sbjct: 467 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 526

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R +M   GL K  G+S+I
Sbjct: 527 RLMMTQKGLNKDLGHSSI 544



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 236/465 (50%), Gaps = 5/465 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L+ L +++  L+V+GLH       + I +    G +  +   F    EPD  +W  +IK 
Sbjct: 15  LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y   N  +  I +Y  M   Q   + F +  VL+AC      G G+++HG+  K GF  +
Sbjct: 75  YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 134

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +Q S++  Y +FG +  AR VFDK+  R VVSW+SII+ Y  N D  E L +F  M +
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             V+PD++ ++S+  A   +  L   +SIHG V +  ++ +  +  S   MY+K G +  
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 254

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F ++EK     W AMIS Y  +G+ ++A++ F +M+      + IT+ + + + A 
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 314

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           +G L   + +    I K    +  ++   LI+ YA+CG +     V   + +++++ W++
Sbjct: 315 VGSLELARWLD-GYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSV 373

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +I  Y   G  +EA+ L  +M+  G+ P+  +    L+AC N G ++ G ++  H++   
Sbjct: 374 MIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDH 432

Query: 430 CKDEFVQ--SSLIDMYSKCGFKNLAY-LLFERIQQKSVVMWNSMI 471
             +   Q  S ++D+  + G+ N AY  +     +  V +W +++
Sbjct: 433 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALL 477



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 124/246 (50%), Gaps = 1/246 (0%)

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
           K  F+    I+     G  N A+  F  + +  +++WN++I G+ Q       I ++  M
Sbjct: 32  KCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM 91

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
            ++ +  +  TFL  ++AC        GK +H +   YG   ++++  +L  MYAK G +
Sbjct: 92  QISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQI 151

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+ VFD + +R VVSW+++I  Y  +G   +A ++FK+M    +KP+ +  ++++ A 
Sbjct: 152 SYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAY 211

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           ++   + +GK     +   G+E +      +  + ++ G +E A    + M  P N  +W
Sbjct: 212 TNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKP-NLILW 270

Query: 671 GALLNG 676
            A+++G
Sbjct: 271 NAMISG 276



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 9/230 (3%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           M  + +  +L +   +H  +   GL ++P     L   YA+ G +  +R  F+  ++P+ 
Sbjct: 208 MTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNL 267

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +W  +I  Y  N + EE+I L+ +MI +   + +    S + A + +G L     + G 
Sbjct: 268 ILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGY 327

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           I K  +  D  + T ++  Y + G +  AR VFD++  +DVV WS +I  Y  +    E 
Sbjct: 328 ISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEA 387

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACG---------ELCSLRPARSIHGH 221
           + +++ M + GV P+  T + L  AC          EL  L P   I  H
Sbjct: 388 ICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPH 437



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           V+ +LI  G+ K  ++     +     GD+  A + F  +SE +++ W+A+I  Y     
Sbjct: 21  VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 80

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
           ++    ++  M  S + PN  TF+ +L AC  +     GK        +G   ++     
Sbjct: 81  VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNS 140

Query: 641 MVDLLSRSGDIEGA---FKMIHSMPFPANGSIWGALLNG 676
           +V + ++ G I  A   F  +H     +    W ++++G
Sbjct: 141 LVSMYAKFGQISYARIVFDKLHDRTVVS----WTSIISG 175


>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 169/466 (36%), Positives = 277/466 (59%), Gaps = 6/466 (1%)

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
            L  + +M  +   PN  T   V  +CA L  +R  +  HC++ + G+  ++  +  +++
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVN-SMV 159

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDS 399
             Y  CG+     KV   I E++++SWN L+S YA+ G ++EA+E+  ++ +  G  PD 
Sbjct: 160 TMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDE 219

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFER 458
            S+ S L ACG +G L+LG  + G V++   K + ++ S+LI MYSKCG    +  +F+ 
Sbjct: 220 MSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDG 279

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  +  + WN+ I  + QNG + EAI+LFH M  N ++ ++VT    + AC++IG L+ G
Sbjct: 280 MPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLG 339

Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
           K +       G++ DI++ TAL DMYAKCG L++AQRVF+ M  +N  SW+AMI     H
Sbjct: 340 KQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASH 399

Query: 579 GQLNDAASLFKQMLDSG--IKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDL 635
           G+  +A SLF++M D G   +PN++TF+++L AC H+G V+EG   F+ M  +FG+ P +
Sbjct: 400 GKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 459

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HY+CMVDLLSR+G +  A+ +I  MP   +    GAL + C+  K +D+ + + + L  
Sbjct: 460 EHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLE 519

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +++G Y + S IY     WD+  ++R++M   G+ K PG S I
Sbjct: 520 LDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWI 565



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 247/476 (51%), Gaps = 26/476 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEPD 59
           + L + C + + L ++H    +  +H        L+     +     S L+F      P+
Sbjct: 25  LSLLKQCPSTKTLQQIHTQFTIHSIH----KPNHLLSQSISLKDFTYSTLIFSHITPHPN 80

Query: 60  SFMWAVLIKCYM--WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + + ++++     W+++   ++ LYH+M     + +NF +P V  AC++L ++      
Sbjct: 81  DYAFNIMLRATTTTWHDY-PLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLA 139

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  + K G D D     S++  Y   G    ARKVFD++T +D+VSW+S+++ Y      
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFA 199

Query: 178 SEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            E +++F  +  E G EPD ++++S+  ACGEL  L   R + G V+ R +K++  +G++
Sbjct: 200 REAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSA 259

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MYSKCG+L+S+ R F  +  R   +W A IS Y ++G   +A+  F  M E   +PN
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKV 355
            +TL  VL +CA +G L  GK +      +G+  ++D ++  ALI+ YA+CG +   ++V
Sbjct: 320 KVTLTAVLSACASIGALDLGKQMDEYATHRGL--QHDIFVATALIDMYAKCGSLESAQRV 377

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVG 413
            + +  +N  SWN +IS  A  G +KEAL L  +M   G    P+  +  S LSAC + G
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAG 437

Query: 414 SLQLGLQ-------IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
            +  G +       + G V KI+       S ++D+ S+ G    A+ + E++ +K
Sbjct: 438 LVDEGYRLFDMMSTLFGLVPKIEH-----YSCMVDLLSRAGHLYEAWDVIEKMPEK 488


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 178/551 (32%), Positives = 303/551 (54%), Gaps = 12/551 (2%)

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTF 254
           F  +L  A+  G       A  +H   LR  + + D     + +  Y + G +  A R F
Sbjct: 74  FPPLLRAAQGPGT------AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAF 127

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  R   +W AM+S   R+    +A+  F +M+      + +T+ +VL  C  LG   
Sbjct: 128 DEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRA 187

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
              ++H   ++ G+  E  ++  A+I+ Y + G + E  KV   +  R++++WN +IS +
Sbjct: 188 LALAMHLYAVKHGLDDEL-FVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI--DCKD 432
            + G    A+E+   M+  G+ PD  ++ S  SA    G +  G  +H ++++   D  D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF-HQMY 491
               ++++DMY+K      A  +F+ +  +  V WN++I G+ QNG + EAI+++ H   
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              L+  + TF++ + A S++G L++G  +H   I  G+  D+Y+ T + D+YAKCG L 
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A  +F+    R+   W+A+I   G+HG    A SLF QM   GI P+ VTF+++L ACS
Sbjct: 427 EAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS 486

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H+G V++G+ +FN M+  +G++P  +HYACMVD+  R+G ++ AF  I +MP   + +IW
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           GALL  CRIH  +++ K   + L      + GYY L+SN+YA+ G WD   +VRS++   
Sbjct: 547 GALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 606

Query: 731 GLKKVPGYSTI 741
            L+K PG+S+I
Sbjct: 607 NLQKTPGWSSI 617



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 290/563 (51%), Gaps = 44/563 (7%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILC-TYGEFGCLDDARKVFD 154
           F +P +LRA    G   +  ++H   ++ G  + D   +  L   Y  FG + DA + FD
Sbjct: 72  FTFPPLLRAAQGPG---TAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFD 128

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M  RDV +W+++++    NA  +E + +F  MV EGV  D VT+ S+   C  L     
Sbjct: 129 EMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRAL 188

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
           A ++H + ++  +  +  + N+ I +Y K G L    + F  +  R   +W ++IS + +
Sbjct: 189 ALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQ 248

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G    A+E F  M +    P+++TL+++  + A  G +  G+SVHC ++R+G       
Sbjct: 249 GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDII 308

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW- 393
            G A+++ YA+  K+   +++  ++  R+ +SWN LI+ Y + G++ EA+ +   MQ   
Sbjct: 309 AGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHE 368

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           GL P   +  S L A  ++G+LQ G ++H   IK     D +V + +ID+Y+KCG  + A
Sbjct: 369 GLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEA 428

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
            LLFE+  ++S   WN++I G   +G+  +A++LF QM    +  D VTF++ + ACS+ 
Sbjct: 429 MLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHA 488

Query: 513 GQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           G +++G+ + +    +YG++             AK                     ++ M
Sbjct: 489 GLVDQGRNFFNMMQTAYGIKP-----------IAK--------------------HYACM 517

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           +D +G  GQL+DA    + M    IKP+   +  +L AC   G+VE GK    +  +F +
Sbjct: 518 VDMFGRAGQLDDAFDFIRNM---PIKPDSAIWGALLGACRIHGNVEMGK--VASQNLFEL 572

Query: 632 EP-DLQHYACMVDLLSRSGDIEG 653
           +P ++ +Y  M ++ ++ G  +G
Sbjct: 573 DPKNVGYYVLMSNMYAKVGKWDG 595



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 161/579 (27%), Positives = 266/579 (45%), Gaps = 46/579 (7%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           PL R+        +LHA  L  GL   D  AS  L+ +Y   G +R +   FD  +  D 
Sbjct: 76  PLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDV 135

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++     N    E++ L+ +M+ E          SVL  C  LGD      +H  
Sbjct: 136 PAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLY 195

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +K G D +  +  +++  YG+ G L++ RKVFD M+SRD+V+W+SII+ +     V+  
Sbjct: 196 AVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASA 255

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEA---CGELCSLRPARSIHGHVLRRKIKI-DGPLGNS 236
           ++MF  M   GV PD +T+LSLA A   CG++C     RS+H +++RR   + D   GN+
Sbjct: 256 VEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG---GRSVHCYMVRRGWDVGDIIAGNA 312

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EP 295
            + MY+K   + +A+R F  +  R   SW  +I+ Y ++G   +A+  +  M + +  +P
Sbjct: 313 IVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKP 372

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
              T ++VL + + LG L++G  +H   I+ G+  +  Y+G  +I+ YA+CGK+ E   +
Sbjct: 373 IQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV-YVGTCVIDLYAKCGKLDEAMLL 431

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
                 R+   WN +IS     G   +AL L  QMQ  G+ PD  +  S L+AC + G +
Sbjct: 432 FEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLV 491

Query: 416 QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
             G                       M +  G K +A              +  M+  F 
Sbjct: 492 DQGRNFFNM-----------------MQTAYGIKPIAK------------HYACMVDMFG 522

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           + G   +A +    M    ++ D   +   + AC   G +E GK     L      K++ 
Sbjct: 523 RAGQLDDAFDFIRNM---PIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELD-PKNVG 578

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNV---VSWSAM 571
               +++MYAK G       V   +  +N+     WS++
Sbjct: 579 YYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 7/282 (2%)

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLL 455
           D+F+    L A    G+     Q+H   +++     D F   +L+  Y + G    AY  
Sbjct: 70  DAFTFPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ ++ + V  WN+M+ G  +N  + EA+ LF +M +  +  D VT  + +  C  +G  
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
                +H   + +G+  ++++  A+ D+Y K G L+  ++VFD MS R++V+W+++I  +
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE-PD 634
              GQ+  A  +F  M DSG+ P+ +T +++  A +  G +  G+     M   G +  D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +     +VD+ ++   IE A +M  SMP   +   W  L+ G
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPV-RDAVSWNTLITG 347



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 84/183 (45%), Gaps = 4/183 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++ TR+HA  + TGL+ D    T +I+ YA+ G L  + L+F+      +
Sbjct: 381 LPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRST 440

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I     +    +++ L+ +M +E  +  +  + S+L ACS  G +  G      
Sbjct: 441 GPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFF-N 499

Query: 121 IIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADV 177
           +++  +    + +    ++  +G  G LDDA      M  + D   W +++ +   + +V
Sbjct: 500 MMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNV 559

Query: 178 SEG 180
             G
Sbjct: 560 EMG 562


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 197/662 (29%), Positives = 353/662 (53%), Gaps = 21/662 (3%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM--- 156
           +++ ACS LG+L +G ++H +I    F+++ V+  +++  Y + G L DA++ FD++   
Sbjct: 12  ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 71

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGE--LCSLR 213
           + RDVV+W+++I+++  N    E L++F  M  +G  P + VT +S+ ++C E  L SL 
Sbjct: 72  SKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLE 131

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV-KIEKRCTTSW---TAMI 269
             R+IHG ++   I+ +  +  + +  Y K G L  A   F+ K ++  +TS    +AMI
Sbjct: 132 DVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMI 191

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           S   ++GW Q++L  F  M     +P+ +TL++VL +C+ L        V  Q +     
Sbjct: 192 SACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSA 251

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
              + LG  L+  YA    +S       AI   +++SWN + + Y +    +EAL L  +
Sbjct: 252 TRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFER 311

Query: 390 MQTWGLMPDSFSVASSLSACGNV---GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSK 445
           M   G+ P   +  ++L+AC       +  +G +I   + +   + D  V ++ ++MY+K
Sbjct: 312 MLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAK 371

Query: 446 CGFKNLAYLLFERIQ--QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL-EMDEVTF 502
           CG    A  +FERI   ++  + WNSM+  +  +G   EA  LF  M    L + ++VTF
Sbjct: 372 CGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTF 431

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD--SM 560
           +  + A ++   + +G+ +H +++S G   D  I  AL +MYAKCG L  AQ +FD  S 
Sbjct: 432 VAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 491

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           ++ +V++W++++  Y  +GQ   A  LF  M   G++PN +TF++ L AC+H G +E+G 
Sbjct: 492 NQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGC 551

Query: 621 FYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
              + M    G+ P  +H++C+VDLL R G ++ A K++      A+   W ALL+ C+ 
Sbjct: 552 ELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKN 610

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
            K ++  +   + +          Y +L+++YA  G W+E   +R  M   G++  PG S
Sbjct: 611 SKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCS 670

Query: 740 TI 741
            +
Sbjct: 671 AV 672



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 176/661 (26%), Positives = 322/661 (48%), Gaps = 67/661 (10%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L  +C+   NL    R+H+ +       +      LI  Y++ GSL  ++  FD    
Sbjct: 11  IALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPR 70

Query: 58  P---DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLG--DL 111
               D   W  +I  ++ N    E++ L+  M  + A   N + + SVL +C   G   L
Sbjct: 71  ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSL 130

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF----DKMTSRDVVSWSSI 167
                +HGRI+  G +++  ++T+++ +YG+ G LDDA +VF    D+  S  +V+ S++
Sbjct: 131 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           I++ + N    E L++F++M  EG +P  VT++S+  A    CS+ P  S    VL + +
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNA----CSMLPVGSATAFVLEQAM 246

Query: 228 KI-----DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKAL 282
           ++     D  LG + +  Y++  DL  A  TF  I+     SW AM + Y +    ++AL
Sbjct: 247 EVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREAL 306

Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE---GKSVHCQIIRKGMGPEYDYLGPAL 339
             F +ML     P++ T IT L +CA          GK +   +   G+  +   +  A 
Sbjct: 307 VLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDT-AVANAT 365

Query: 340 IEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM- 396
           +  YA+CG +++   V   I    R+ ++WN +++ Y   G+ KEA EL   M+   L+ 
Sbjct: 366 LNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVK 425

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLL 455
           P+  +  + L A  +  S+  G +IH  V+    + D  +Q++L++MY+KCG  + A  +
Sbjct: 426 PNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAI 485

Query: 456 FER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           F++    Q+ V+ W S++ G+ Q G +  A+ LF  M    +  + +TF++A+ AC++ G
Sbjct: 486 FDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGG 545

Query: 514 QLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           +LE+G + +      +G+       + + D+  +CG L  A+++ +  S+ +V++W A++
Sbjct: 546 KLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 605

Query: 573 DC----------------------------------YGMHGQLNDAASLFKQMLDSGIKP 598
           D                                   Y   G+ N+AA++ K MLD GI+ 
Sbjct: 606 DACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRA 665

Query: 599 N 599
           +
Sbjct: 666 D 666



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 246/481 (51%), Gaps = 19/481 (3%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V P+   +++L  AC  L +L   R IH  +  R  + +  LGN+ I MYSKCG L+ A+
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 252 RTFVKI---EKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSC 307
           + F ++    KR   +W AMIS + R+G  ++AL+ F  M  +    PN +T ++VL SC
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 308 --AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER--- 362
             AGL  L + +++H +I+  G+  E  ++  AL++ Y + G + +  +V     +    
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREA-FVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 363 -NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG--NVGSLQLGL 419
            ++++ + +IS   + G  +E+L L   M   G  P   ++ S L+AC    VGS    +
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
                 +    +D  + ++L+  Y++    + A   F+ IQ   VV WN+M   + Q+  
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK---GKWVHHKLISYGVRKDIYI 536
             EA+ LF +M L  +     TF+TA+ AC+          GK +   L   G+  D  +
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LD 593
             A  +MYAKCG L  A+ VF+ +S   R+ ++W++M+  YG HG   +A  LF+ M  +
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
             +KPN+VTF+ +L A +   S+ +G+     +   G E D      ++++ ++ G ++ 
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDD 481

Query: 654 A 654
           A
Sbjct: 482 A 482


>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 169/469 (36%), Positives = 278/469 (59%), Gaps = 6/469 (1%)

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           +   L  + +M  +   PN  T   V  +CA L  +R  +  HC++ + G+  ++  +  
Sbjct: 98  YPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVN- 156

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLM 396
           +++  Y  CG+     KV   I E++++SWN L+S YA+ G ++EA+E+  ++ +  G  
Sbjct: 157 SMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFE 216

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLL 455
           PD  S+ S L ACG +G L+LG  + G V++   K + ++ S+LI MYSKCG    +  +
Sbjct: 217 PDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRI 276

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ +  +  + WN+ I  + QNG + EAI+LFH M  N ++ ++VT    + AC++IG L
Sbjct: 277 FDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGAL 336

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + GK +       G++ DI++ TAL DMYAKCG L++AQRVF+ M  +N  SW+AMI   
Sbjct: 337 DLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISAL 396

Query: 576 GMHGQLNDAASLFKQMLDSG--IKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVE 632
             HG+  +A SLF++M D G   +PN++TF+++L AC H+G V+EG   F+ M  +FG+ 
Sbjct: 397 ASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLV 456

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P ++HY+CMVDLLSR+G +  A+ +I  MP   +    GAL + C+  K +D+ + + + 
Sbjct: 457 PKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQM 516

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L     +++G Y + S IY     WD+  ++R++M   G+ K PG S I
Sbjct: 517 LLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWI 565



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 247/476 (51%), Gaps = 26/476 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEPD 59
           + L + C + + L ++H    +  +H        L+     +     S L+F      P+
Sbjct: 25  LSLLKQCPSTKTLQQIHTQFTIHSIH----KPNHLLSQSISLKDFTYSTLIFSHITPHPN 80

Query: 60  SFMWAVLIKCYM--WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + + ++++     W+++   ++ LYH+M     + +NF +P V  AC++L ++      
Sbjct: 81  DYAFNIMLRATTTTWHDY-PLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLA 139

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  + K G D D     S++  Y   G    ARKVFD++T +D+VSW+S+++ Y      
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFA 199

Query: 178 SEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            E +++F  +  E G EPD ++++S+  ACGEL  L   R + G V+ R +K++  +G++
Sbjct: 200 REAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSA 259

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MYSKCG+L+S+ R F  +  R   +W A IS Y ++G   +A+  F  M E   +PN
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKV 355
            +TL  VL +CA +G L  GK +      +G+  ++D ++  ALI+ YA+CG +   ++V
Sbjct: 320 KVTLTAVLSACASIGALDLGKQMDEYATHRGL--QHDIFVATALIDMYAKCGSLESAQRV 377

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG--LMPDSFSVASSLSACGNVG 413
            + +  +N  SWN +IS  A  G +KEAL L  +M   G    P+  +  S LSAC + G
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAG 437

Query: 414 SLQLGLQ-------IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
            +  G +       + G V KI+       S ++D+ S+ G    A+ + E++ +K
Sbjct: 438 LVDEGYRLFDMMSTLFGLVPKIEH-----YSCMVDLLSRAGHLYEAWDVIEKMPEK 488


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/596 (31%), Positives = 321/596 (53%), Gaps = 30/596 (5%)

Query: 172 FDNADVSEGLKMFHSMVREGV----EPDFVTMLS------LAEACGELCSLRPARSIHGH 221
            ++ D S G +  HS+++  V    EP   T +       L + C +      AR IHGH
Sbjct: 30  LNDKDKSVGFQKNHSLIQLNVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGH 89

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
           +++     D  +    + +YSKCG + SA + F  + +R   +WT +++ Y ++     A
Sbjct: 90  IVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLA 149

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALI 340
           L+ F+KMLE    P+  TL  VL +C+ L  +  GK VH  +I+  +  ++D  +G +L 
Sbjct: 150 LQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHI--DFDTSIGNSLS 207

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
            FY++  ++    K    I E++++SW  +IS     G +  +L   + M + G+ P+ +
Sbjct: 208 SFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEY 267

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERI 459
           ++ S LSAC  + +L LG QIH   IK+       +++S++ +Y KCG+   A  LFE +
Sbjct: 268 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 327

Query: 460 QQKSVVMWNSMICGF-------------YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           +  ++V WN+MI G              +++G++  A+ +F ++Y + ++ D  TF + +
Sbjct: 328 ETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGST--ALAMFQKLYRSGMKPDLFTFSSVL 385

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
             CSN+  LE+G+ +H ++I  GV  D+ + TAL  MY KCG +  A + F  M  R ++
Sbjct: 386 SVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMI 445

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW++MI  +  HG    A  LF+ M   GIKPN+VTF+ +L ACSH+G  +E  +YF  M
Sbjct: 446 SWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELM 505

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
            + + ++P + H+AC++D+  R G +E AF ++H M F  N +IW  L+ GCR H + D+
Sbjct: 506 QKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDL 565

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                ++L      D   Y  L N++   G W +  KVR +M+   + K+  +S I
Sbjct: 566 GFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWI 621



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 272/529 (51%), Gaps = 19/529 (3%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           S++ +P +L+ C           +HG I+K GF +D  + T ++  Y + G ++ A KVF
Sbjct: 64  SSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 122

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D +  R+V +W++++  Y  N+     L++F  M+  G  P   T+  +  AC  L S+ 
Sbjct: 123 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE 182

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + +H ++++  I  D  +GNS    YSK   L  A + F  I+++   SWT++IS   
Sbjct: 183 FGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 242

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
            +G   ++L  F+ ML    +PN  TL +VL +C  +  L  G  +H   I+ G G    
Sbjct: 243 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSI- 301

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR-----------KGMSKE 382
            +  +++  Y +CG + E +K+   +   N+++WN +I+ +A+                 
Sbjct: 302 LIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGST 361

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           AL +  ++   G+ PD F+ +S LS C N+ +L+ G QIHG +IK     D  V ++L+ 
Sbjct: 362 ALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVS 421

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY+KCG  + A   F  +  ++++ W SMI GF ++G S +A+ LF  M L  ++ ++VT
Sbjct: 422 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVT 481

Query: 502 FLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           F+  + ACS+ G  ++  +    +   Y ++  +     L DMY + G ++ A  V   M
Sbjct: 482 FVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKM 541

Query: 561 S-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV-TFMNIL 607
           + E N   WS +I     HG+ +      +Q+L   +KP +V T++++L
Sbjct: 542 NFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLL 588



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 179/655 (27%), Positives = 295/655 (45%), Gaps = 85/655 (12%)

Query: 2   PLFRSCT--NLRKLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           PL + C   NL    R+ H H++ TG H D    T L+  Y++ G + S+  VFD     
Sbjct: 69  PLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRR 128

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   W  L+  Y+ N+    ++ L+ KM+   A  SN+    VL ACSSL  +  G++VH
Sbjct: 129 NVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 188

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +IK   D D  I  S+   Y +F  L+ A K F  +  +DV+SW+S+I+S  DN   +
Sbjct: 189 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 248

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L  F  M+ +G++P+  T+ S+  AC  + +L     IH   ++        + NS +
Sbjct: 249 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 308

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY-------------NRSGWFQKALESF 285
            +Y KCG L+ A++ F  +E     +W AMI+ +             ++SG    AL  F
Sbjct: 309 YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG--STALAMF 366

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            K+     +P+L T  +VL  C+ L  L +G+ +H QII+ G+  +   +G AL+  Y +
Sbjct: 367 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADV-VVGTALVSMYNK 425

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           CG + +  K    +  R ++SW  +I+ +AR G+S++AL+L   M+  G+ P+  +    
Sbjct: 426 CGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGV 485

Query: 406 LSACGNVGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           LSAC + G     L     + K        D F  + LIDMY + G          R++ 
Sbjct: 486 LSACSHAGLADEALYYFELMQKQYNIKPVMDHF--ACLIDMYLRLG----------RVE- 532

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
                               EA ++ H+M     E +E  +   I  C + G+ + G + 
Sbjct: 533 --------------------EAFDVVHKMN---FEPNETIWSMLIAGCRSHGKSDLGFYA 569

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
             +L+     KD+    +L +M+   G  +   +V   M E  V             G+L
Sbjct: 570 AEQLLKLK-PKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKV-------------GKL 615

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY---FNAMRIFGVEP 633
            D + +  +      KPN+          SH  S+E  K      N ++  G EP
Sbjct: 616 KDWSWISIKEKVYSFKPNDK---------SHCQSLEMYKLLETVLNEVKALGYEP 661


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 187/566 (33%), Positives = 306/566 (54%), Gaps = 42/566 (7%)

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
           A+ +H   +R +  +     +  I +Y+    L  A   F  ++     +W ++I C+  
Sbjct: 24  AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
              F KAL SFV+M      P+     +VL SC  +  LR G+SVH  I+R GM  +  Y
Sbjct: 83  QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL-Y 141

Query: 335 LGPALIEFYA---------------------------ECGKMSEC---------EKVIHA 358
            G AL+  YA                           E  K   C          +V   
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++++S+N +I+ YA+ GM ++AL ++ +M T  L PDSF+++S L        +  G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261

Query: 419 LQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
            +IHG+VI+  ID  D ++ SSL+DMY+K      +  +F R+  +  + WNS++ G+ Q
Sbjct: 262 KEIHGYVIRKGID-SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG   EA+ LF QM    ++   V F + I AC+++  L  GK +H  ++  G   +I+I
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
            +AL DMY+KCG+++ A+++FD M+  + VSW+A+I  + +HG  ++A SLF++M   G+
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           KPN+V F+ +L ACSH G V+E   YFN+M +++G+  +L+HYA + DLL R+G +E A+
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500

Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
             I  M     GS+W  LL+ C +HK +++ + + +++    + + G Y L+ N+YA  G
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560

Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
            W E  K+R  M   GL+K P  S I
Sbjct: 561 RWKEMAKLRLRMRKKGLRKKPACSWI 586



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 213/436 (48%), Gaps = 40/436 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LHA  + T       AS  +I  Y  +  L  + L+F T K P    W  +I+C+   +
Sbjct: 26  QLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F +++  + +M        + ++PSVL++C+ + DL  GE VHG I++ G D D     
Sbjct: 85  LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 135 SILCTYGE-------------------------------------FGCLDDARKVFDKMT 157
           +++  Y +                                     FG +D  R+VF+ M 
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMP 203

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            +DVVS+++IIA Y  +    + L+M   M    ++PD  T+ S+     E   +   + 
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IHG+V+R+ I  D  +G+S + MY+K   +  +ER F ++  R   SW ++++ Y ++G 
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           + +AL  F +M+  K +P  +   +V+ +CA L  L  GK +H  ++R G G    ++  
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI-FIAS 382

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL++ Y++CG +    K+   +   + +SW  +I  +A  G   EA+ L  +M+  G+ P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442

Query: 398 DSFSVASSLSACGNVG 413
           +  +  + L+AC +VG
Sbjct: 443 NQVAFVAVLTACSHVG 458



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 184/391 (47%), Gaps = 45/391 (11%)

Query: 45  LRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS----NFIYPS 100
           + S R VF+     D   +  +I  Y  +  +E+++    +M+RE  T      +F   S
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDAL----RMVREMGTTDLKPDSFTLSS 247

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           VL   S   D+  G+++HG +I+ G D D  I +S++  Y +   ++D+ +VF ++  RD
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
            +SW+S++A Y  N   +E L++F  MV   V+P  V   S+  AC  L +L   + +HG
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
           +VLR     +  + ++ + MYSKCG++ +A + F ++      SWTA+I  +   G   +
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPAL 339
           A+  F +M     +PN +  + VL +C+ +G + E       + +  G+  E ++   A+
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA-AV 486

Query: 340 IEFYAECGKMSE--------------------------------CEKV---IHAIGERNI 364
            +     GK+ E                                 EKV   I  +   N+
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            ++ ++ + YA  G  KE  +L ++M+  GL
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 110/209 (52%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P+F    ++ K   +H +++  G+  D    + L++ YA+   +  S  VF      D 
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  L+  Y+ N  + E++ L+ +M+  +       + SV+ AC+ L  L  G+++HG 
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +++ GF  +  I ++++  Y + G +  ARK+FD+M   D VSW++II  +  +    E 
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           + +F  M R+GV+P+ V  +++  AC  +
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHV 457


>gi|302799100|ref|XP_002981309.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
 gi|300150849|gb|EFJ17497.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
          Length = 682

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 205/692 (29%), Positives = 350/692 (50%), Gaps = 22/692 (3%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           + + G +  +R +F     P+ F W +++     N    E++LL  +MI E A      +
Sbjct: 2   FGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCF 61

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD-VIQTSILCTYGEFGCLDDARKVFDKMT 157
            ++L  C++  DL  G+  H  I+ CG +    V+  +++  YG+   LD AR  FD+M 
Sbjct: 62  VTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRME 121

Query: 158 ----SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
                RDVV+W+S++A++  N  + E  ++F  M  EG++P  VT+  + E+C      R
Sbjct: 122 HQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS---GDR 178

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             +  H  VL   ++ D  L NS + MY++CG L  +   F  I+++   SW  MIS   
Sbjct: 179 QGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEA 238

Query: 274 RSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           R G  ++A+E   ++ LE   EP+ +T I+V+ +C+ LG L    ++   +   G   + 
Sbjct: 239 RLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDL 298

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             LG A++  + + G +         +  +N++SWN LIS YA+    +  LEL  QM  
Sbjct: 299 -LLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQ 357

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL 451
            G+  +S +  S L AC  + +L  G ++H  +     +    V ++LI+MY KC    L
Sbjct: 358 EGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCQELQL 417

Query: 452 AYLLFERIQQ---KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
           A  L ER Q    +  V WN++   + QNG+ LEA+ LF +M    +   E TF+T + A
Sbjct: 418 AQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATFVTILDA 477

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C +   L        KL S+       I  AL  MY+KCG +  A     S+S R +++W
Sbjct: 478 CGDSSSLLAHGRSIAKLSSW---TSDAIKGALLGMYSKCGCVDDALAALQSLSSRGLLAW 534

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR- 627
           ++M+  Y   G+ ++A  +  QM   G+ P++V F  +++ACSH+G + E       +  
Sbjct: 535 TSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEALVRLAWVSG 594

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
            +G       Y C+VD+L+R G ++ A +++H+MP+  +   W ALL  C +H  ++   
Sbjct: 595 DYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGDLERGA 654

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
                 ++  +  +G Y LLSN+YA   +W++
Sbjct: 655 RTAGHEALLDSG-SGRYVLLSNMYA---SWED 682



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 206/387 (53%), Gaps = 9/387 (2%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           M+ KCGD+  A   F  + +    SWT +++   R+G   +AL    +M+     P+++ 
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM----SECEKV 355
            +T+L  CA    L +GK  H  I+  G+      LG ALI  Y +C  +    ++ +++
Sbjct: 61  FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            H    R++++WN L++ +   G  +EA  L  +M+  G+ P S ++   L +C   G  
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDR 178

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           Q G   H  V+ +  + DEF+ +SL+ MY++CG    + L+F  I QK ++ WN MI   
Sbjct: 179 Q-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237

Query: 475 YQNGNSLEAINLFHQMYLNCL-EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
            + G+S EA+ L  ++ L    E DEVTF++ + ACS +G L+    +   + S G   D
Sbjct: 238 ARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDD 297

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + +  A+ +M+ K G L  A+  FD +  +NVVSW+ +I  Y  + Q      LF+QM  
Sbjct: 298 LLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQ 357

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGK 620
            G+K N VTF+++L ACS   +++ G+
Sbjct: 358 EGVKANSVTFVSLLDACSTIPALDFGR 384



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 254/553 (45%), Gaps = 46/553 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +  SC+  R+    H  +L  GL  D      L++ YA  G L  SRLVF    + D   
Sbjct: 170 VLESCSGDRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIIS 229

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQ-ATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W V+I         EE++ L  ++  E         + SV+ ACS LGDL     +   +
Sbjct: 230 WNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELV 289

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
              GFD D ++  +++  +G+ GCLD AR  FD++  ++VVSW+ +I+ Y  N      L
Sbjct: 290 SSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCL 349

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++F  M +EGV+ + VT +SL +AC  + +L   R +H  +    +++   +  + I MY
Sbjct: 350 ELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMY 409

Query: 242 SKCGDLLSAERTFVKIEK---RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            KC +L  A+    + +    R + +W A+ + Y ++G   +ALE F +M +        
Sbjct: 410 GKCQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEA 469

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T +T+L +C     L      H + I K      D +  AL+  Y++CG + +    + +
Sbjct: 470 TFVTILDACGDSSSLL----AHGRSIAKLSSWTSDAIKGALLGMYSKCGCVDDALAALQS 525

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R +L+W  +++ YA  G + EAL +L QMQ  G++PD  + ++ + AC + G L   
Sbjct: 526 LSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLL--- 582

Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
              H  +++                       LA++  +        ++  ++    + G
Sbjct: 583 ---HEALVR-----------------------LAWVSGDYGTAMGAGLYECVVDVLARMG 616

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV--HHKLISYGVRKDIYI 536
              EA  L H M     E D + ++  + AC+  G LE+G     H  L+  G  + +  
Sbjct: 617 RLQEAEELMHAMP---YEPDSLAWMALLGACTVHGDLERGARTAGHEALLDSGSGRYVL- 672

Query: 537 DTALTDMYAKCGD 549
              L++MYA   D
Sbjct: 673 ---LSNMYASWED 682


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 180/521 (34%), Positives = 282/521 (54%), Gaps = 34/521 (6%)

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
           V+   ++ID  L    +  YS  G+   A   F +  ++    +  MI  Y  +  + +A
Sbjct: 62  VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
           L  F  ML     P+  T   VL +C+GL  LR G  VH  I++ G+     ++G AL+ 
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNL-FIGNALVA 180

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            Y +CG + E  KV+  +  R+++SWN +++ YA+ G   +ALE+  +M +  L  D+ +
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           +AS LS      SL+    IH                                +FER+ +
Sbjct: 241 MAS-LSPVVCYTSLENVQYIHN-------------------------------MFERMTK 268

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K+++ WN MI  +  N    EA++LF QM    ++ D VT  + + AC ++  L  G+ +
Sbjct: 269 KNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL 328

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  +    +R ++ ++ AL DMYAKCG L+ A+ VFD M  R+VVSW++M+  YG  GQ 
Sbjct: 329 HKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQG 388

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYAC 640
            DA +LF +MLDSG  P+ + F+++L ACSH+G +++G+ YF  M   +G+ P ++H+AC
Sbjct: 389 YDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFAC 448

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDL  R+G++E A+  I  MP   N  +WGALL+ CR+H ++D+       L       
Sbjct: 449 MVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQ 508

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +GYY LLSNIYA+ G W +   VR  M+  G+KKVPG S +
Sbjct: 509 SGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNV 549



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 215/455 (47%), Gaps = 75/455 (16%)

Query: 10  LRKLTRLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           ++ L +LH+ +++   L  DP  + +L+ +Y+  G    +R +FD   E +   + V+I+
Sbjct: 51  IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD- 127
            Y+ NN + E++ ++  M+       ++ +P VL+ACS L +L  G +VH  I+K G D 
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDT 170

Query: 128 ------------------------------KDDVIQTSILCTYGEFGCLDDARKV----- 152
                                         +D V   S++  Y + G  DDA ++     
Sbjct: 171 NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 153 --------------------------------FDKMTSRDVVSWSSIIASYFDNADVSEG 180
                                           F++MT ++++SW+ +IA Y +N+  +E 
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEA 290

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G++PD VT+ SL  ACG+L +L   R +H ++ +  ++ +  L N+ + M
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDM 350

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L  A   F K+  R   SWT+M+S Y RSG    A+  F KML+  + P+ I  
Sbjct: 351 YAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAF 410

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++VL +C+  G L +G+     +  + G+ P  ++    +++ +   G++ E    I  +
Sbjct: 411 VSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA-CMVDLFGRAGEVEEAYSFIKQM 469

Query: 360 G-ERNILSWNMLISE---YARKGMSKEALELLVQM 390
             E N   W  L+S    +++  +   A +LL Q+
Sbjct: 470 PMEPNERVWGALLSACRVHSKMDIGLVAADLLFQL 504


>gi|302767656|ref|XP_002967248.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
 gi|300165239|gb|EFJ31847.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
          Length = 672

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/653 (29%), Positives = 339/653 (51%), Gaps = 13/653 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L++ Y + GSLR +   F + +E + F W + +  +  N    ++I L+  M  +   + 
Sbjct: 26  LVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTAFAQNGDPRQAIHLFQAMCLDGVELD 85

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              + + + ACSSLGDL  G  +H  I    F  D V++ S++  Y + G    A ++F 
Sbjct: 86  RVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEELFQ 145

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           ++  +  V+++++IA+Y       E L ++ +M  EGV PD V MLS   AC    S   
Sbjct: 146 RLELKSAVAYTALIAAYSQFKMGREALGLYRAMHLEGVAPDKVAMLSALGACA---SEPD 202

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV--KIEKRCTTSWTAMISCY 272
            R+IH  ++      D  + ++ + MY +   L SA+  F   ++ +     W +MIS Y
Sbjct: 203 GRAIHACIICCGSDGDDTVASALVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSMISAY 262

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            +SG  ++ALE F KM      P+++T++ +LG C+ L  L + + +H Q+ R  +  + 
Sbjct: 263 VQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVLRKLDKARMIHAQL-RARVDADT 321

Query: 333 DYLGPALIEFYAECGKMSECEKVIH--AIGERNILSWNMLISEYARKGMSKEALELLVQM 390
             +  +L+  Y EC  + +   V    A G R+ ++WN +I+ YA  G    AL+L   M
Sbjct: 322 AVV-DSLLNVYRECRSLEDAVTVFREEAGGARDCIAWNTMIAAYAECGDPGMALKLFTLM 380

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGF 448
              G+ P   +  + L A  ++G+L  G  +H H I+    DE  FV +SL+  Y  CG 
Sbjct: 381 DLHGVEPTEVTYVAVLGAASSLGALTRGASLH-HRIRSCGLDELPFVSNSLMQFYGSCGR 439

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + A  +F  ++++  V WN+++  + Q+G    A+ +FH M L  +  + +T    + A
Sbjct: 440 LSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALVVFHGMELEGVRANVITLTNVVTA 499

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+  G   KGK +H +++S G+     + +AL  MY K G L  A   F+ +S +N V+W
Sbjct: 500 CTVTGDAAKGKSIHARVLSMGLEHHSAVGSALVAMYGKFGMLDRAMSCFNDISAKNTVAW 559

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF-NAMR 627
           +A++  +   GQ  +   L + M   G++ +  +++ +L+ACSH G VEE    F N + 
Sbjct: 560 NALMSGFAQQGQSVETVELSRAMQLQGMESDSASYLVVLFACSHGGLVEEALSCFSNLVE 619

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
              V  + +HY C++DLL+R+G ++ A  +  SMPF  + + W +L+  C++H
Sbjct: 620 DGSVAANDEHYGCLIDLLARAGWLDRAEDLFRSMPFEPDSTSWMSLVGACKLH 672



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 283/571 (49%), Gaps = 11/571 (1%)

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
           L  G+ +H ++ K G+ ++  +   ++  YG+ G L DA   F  +  R++ +W+  + +
Sbjct: 1   LEQGKTIHDQMSKDGYSRETYLGNLLVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTA 60

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           +  N D  + + +F +M  +GVE D V   +   AC  L  L   RS+H  +     + D
Sbjct: 61  FAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSD 120

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             L  S I MY+K G+   AE  F ++E +   ++TA+I+ Y++    ++AL  +  M  
Sbjct: 121 AVLRVSLINMYAKAGEFALAEELFQRLELKSAVAYTALIAAYSQFKMGREALGLYRAMHL 180

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
               P+ + +++ LG+CA      +G+++H  II  G   + D +  AL+  Y     + 
Sbjct: 181 EGVAPDKVAMLSALGACAS---EPDGRAIHACIICCGSDGD-DTVASALVSMYGRFQMLE 236

Query: 351 ECEKVI--HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
             + V     +   ++  WN +IS Y + G  +EALEL  +M+  G+ PD  ++   L  
Sbjct: 237 SAKSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGV 296

Query: 409 CGNVGSLQLGLQIHGHV-IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLF--ERIQQKSVV 465
           C  +  L     IH  +  ++D  D  V  SL+++Y +C     A  +F  E    +  +
Sbjct: 297 CSVLRKLDKARMIHAQLRARVD-ADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCI 355

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN+MI  + + G+   A+ LF  M L+ +E  EVT++  + A S++G L +G  +HH++
Sbjct: 356 AWNTMIAAYAECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRI 415

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
            S G+ +  ++  +L   Y  CG L +A  VF S+  R+ VSW+ ++  Y  HG  + A 
Sbjct: 416 RSCGLDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTAL 475

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLL 645
            +F  M   G++ N +T  N++ AC+ +G   +GK     +   G+E      + +V + 
Sbjct: 476 VVFHGMELEGVRANVITLTNVVTACTVTGDAAKGKSIHARVLSMGLEHHSAVGSALVAMY 535

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            + G ++ A    + +    N   W AL++G
Sbjct: 536 GKFGMLDRAMSCFNDIS-AKNTVAWNALMSG 565



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 161/371 (43%), Gaps = 7/371 (1%)

Query: 7   CTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVF--DTFKEPDSF 61
           C+ LRKL +   +HA L    +  D      L+  Y E  SL  +  VF  +     D  
Sbjct: 297 CSVLRKLDKARMIHAQLRAR-VDADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCI 355

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  Y        ++ L+  M       +   Y +VL A SSLG L  G  +H RI
Sbjct: 356 AWNTMIAAYAECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRI 415

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
             CG D+   +  S++  YG  G L  A  VF  +  RD VSW++I+  Y  +      L
Sbjct: 416 RSCGLDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTAL 475

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +FH M  EGV  + +T+ ++  AC         +SIH  VL   ++    +G++ + MY
Sbjct: 476 VVFHGMELEGVRANVITLTNVVTACTVTGDAAKGKSIHARVLSMGLEHHSAVGSALVAMY 535

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            K G L  A   F  I  + T +W A++S + + G   + +E    M     E +  + +
Sbjct: 536 GKFGMLDRAMSCFNDISAKNTVAWNALMSGFAQQGQSVETVELSRAMQLQGMESDSASYL 595

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG- 360
            VL +C+  G + E  S    ++  G     D     LI+  A  G +   E +  ++  
Sbjct: 596 VVLFACSHGGLVEEALSCFSNLVEDGSVAANDEHYGCLIDLLARAGWLDRAEDLFRSMPF 655

Query: 361 ERNILSWNMLI 371
           E +  SW  L+
Sbjct: 656 EPDSTSWMSLV 666


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/594 (31%), Positives = 310/594 (52%), Gaps = 39/594 (6%)

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           K+   ++R    P+     +L    G+L  L+ AR++  H+ +  +       N+ +  Y
Sbjct: 26  KLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFS----WNTLLSAY 81

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITL 300
           SK G L   +R F  +      SW +++S Y  +G   +++  +  ML+      N IT 
Sbjct: 82  SKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITF 141

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            T+L   +  G++  G+ +H QI + G    Y ++G  L++ YA+ G +++  ++   I 
Sbjct: 142 STMLILSSNRGFVDLGRQIHGQIFKFGY-QSYLFVGSPLVDMYAKTGFINDANRIFEEIP 200

Query: 361 ERNI-------------------------------LSWNMLISEYARKGMSKEALELLVQ 389
           E+NI                               +SW  +I+   + G+ KEA++   +
Sbjct: 201 EKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKE 260

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGF 448
           M   G   D F+  S L+ACG   +L  G QIH ++I+ D +D  FV S+L+DMY KC  
Sbjct: 261 MGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRN 320

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
              A  +F +++ K+V+ W +M+ G+ QNG S EA+ +F  M  N +  D+ T  + I +
Sbjct: 321 VKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISS 380

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C+N+  LE+G   H + ++ G+   + +  AL  +Y KCG L+ A ++F  M  R+ VSW
Sbjct: 381 CANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSW 440

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-R 627
           +A++  Y   G+ N+  SLF+ ML  GI P+ VTF+ +L ACS +G VE+G  YF  M +
Sbjct: 441 TALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK 500

Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMK 687
              + P   HY CM+DLLSR+G +E A   I+ MPF  +   W  LL+ CR++  +++ K
Sbjct: 501 EHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGK 560

Query: 688 TIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              + L      +   Y LLS+IYA +G WD+  K+R  M   G+KK PG+S I
Sbjct: 561 WAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWI 614



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 262/544 (48%), Gaps = 58/544 (10%)

Query: 82  LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG 141
           L+ ++IR       F+Y +++     LGDL +   V   I +           ++L  Y 
Sbjct: 27  LHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNL----FSWNTLLSAYS 82

Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV----EPDFV 197
           + G L D ++VFD M + DVVSW+S+++ Y  N  +SE +++++ M+++G        F 
Sbjct: 83  KLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFS 142

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           TML L+   G    +   R IHG + +   +    +G+  + MY+K G +  A R F +I
Sbjct: 143 TMLILSSNRG---FVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEI 199

Query: 258 EK--------------RC-----------------TTSWTAMISCYNRSGWFQKALESFV 286
            +              RC                 + SWT +I+   ++G F++A++ F 
Sbjct: 200 PEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFK 259

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           +M       +  T  +VL +C G   L EGK +H  IIR        ++G AL++ Y +C
Sbjct: 260 EMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNI-FVGSALLDMYCKC 318

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
             +   E V   +  +N++SW  ++  Y + G S+EA+ +   MQ   + PD F++ S +
Sbjct: 319 RNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVI 378

Query: 407 SACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           S+C N+ SL+ G Q HG  +   + C    V ++LI +Y KCG    A+ LF  ++ +  
Sbjct: 379 SSCANLASLEEGAQFHGQALASGLICFVT-VSNALITLYGKCGSLEHAHQLFHEMKIRDE 437

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV--- 521
           V W +++ G+ Q G + E I+LF  M  + +  D VTF+  + ACS  G +EKG      
Sbjct: 438 VSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFEC 497

Query: 522 ---HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGM 577
               H++       D Y  T + D+ ++ G L+ A+   + M    + + W+ ++    +
Sbjct: 498 MVKEHRITPI---PDHY--TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRL 552

Query: 578 HGQL 581
           +G L
Sbjct: 553 NGNL 556



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 146/599 (24%), Positives = 255/599 (42%), Gaps = 105/599 (17%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATI 93
           L+ +Y+++G L+  + VFD+    D   W  L+  Y  N    ES+ +Y+ M+++    +
Sbjct: 77  LLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNL 136

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           +   + ++L   S+ G +  G ++HG+I K G+     + + ++  Y + G ++DA ++F
Sbjct: 137 NRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIF 196

Query: 154 -------------------------------DKMTSRDVVSWSSIIASYFDNADVSEGLK 182
                                          D M  +D +SW++II     N    E + 
Sbjct: 197 EEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVD 256

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
            F  M  EG   D  T  S+  ACG   +L   + IH +++R   + +  +G++ + MY 
Sbjct: 257 KFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYC 316

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KC ++  AE  F K+  +   SWTAM+  Y ++G+ ++A+  F  M   +  P+  TL +
Sbjct: 317 KCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGS 376

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           V+ SCA L  L EG   H Q +  G+   +  +  ALI  Y +CG +    ++ H +  R
Sbjct: 377 VISSCANLASLEEGAQFHGQALASGL-ICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR 435

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + +SW  L+S YA+ G + E + L   M   G++PD  +    LSAC   G ++ G    
Sbjct: 436 DEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYF 495

Query: 423 GHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
             ++K        D +  + +ID+ S+ G          R++                  
Sbjct: 496 ECMVKEHRITPIPDHY--TCMIDLLSRAG----------RLE------------------ 525

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
              EA N  +QM       D + + T + +C   G LE GKW                  
Sbjct: 526 ---EAKNFINQM---PFSPDAIGWATLLSSCRLNGNLEIGKW------------------ 561

Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
                         A      +  +N  S+  +   Y   G+ +D A L K M + G+K
Sbjct: 562 --------------AAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVK 606



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 200/424 (47%), Gaps = 66/424 (15%)

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K +HC+IIR    PE  +L   LI  Y + G +     V   I + N+ SWN L+S Y++
Sbjct: 25  KKLHCRIIRTLTNPE-TFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSK 83

Query: 377 KGMSKEALELLVQMQ-----TW----------GLMPDSFSV-----------------AS 404
            G  ++   +   M      +W          GL+ +S  V                 ++
Sbjct: 84  LGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFST 143

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            L    N G + LG QIHG + K   +   FV S L+DMY+K GF N A  +FE I +K+
Sbjct: 144 MLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKN 203

Query: 464 VVMWNSMICGFY-------------------------------QNGNSLEAINLFHQMYL 492
           +V++N+MI G                                 QNG   EA++ F +M +
Sbjct: 204 IVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGI 263

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
               MD+ TF + + AC     L++GK +H  +I    + +I++ +AL DMY KC +++ 
Sbjct: 264 EGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKY 323

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A+ VF  M  +NV+SW+AM+  YG +G   +A  +F  M  + I P++ T  +++ +C++
Sbjct: 324 AEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCAN 383

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
             S+EEG  +       G+   +     ++ L  + G +E A ++ H M      S W A
Sbjct: 384 LASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS-WTA 442

Query: 673 LLNG 676
           L++G
Sbjct: 443 LVSG 446



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 138/303 (45%), Gaps = 33/303 (10%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA+++ T    +    + L++ Y +  +++ +  VF   +  +   W  ++  Y  N 
Sbjct: 291 QIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNG 350

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           + EE++ ++  M R +    +F   SV+ +C++L  L  G + HG+ +  G      +  
Sbjct: 351 YSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSN 410

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  YG+ G L+ A ++F +M  RD VSW+++++ Y      +E + +F +M+  G+ P
Sbjct: 411 ALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVP 470

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D VT + +  AC      R      G+                   Y +C   +  E   
Sbjct: 471 DGVTFVGVLSACS-----RAGLVEKGY------------------HYFEC---MVKEHRI 504

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             I       +T MI   +R+G  ++A ++F+  +     P+ I   T+L SC   G L 
Sbjct: 505 TPIPDH----YTCMIDLLSRAGRLEEA-KNFINQMPF--SPDAIGWATLLSSCRLNGNLE 557

Query: 315 EGK 317
            GK
Sbjct: 558 IGK 560



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 43/256 (16%)

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA-------- 553
           +  A++ C       + K +H ++I      + ++   L + Y K GDL+ A        
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 554 -----------------------QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
                                  QRVFDSM   +VVSW++++  Y  +G ++++  ++  
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 591 ML-DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           ML D  +  N +TF  +L   S+ G V+ G+     +  FG +  L   + +VD+ +++G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNG---CRI----HKRIDVMK---TIEKELSVTGTN 699
            I  A ++   +P   N  ++  ++ G   CR      +  D M    +I     +TG  
Sbjct: 188 FINDANRIFEEIP-EKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLT 246

Query: 700 DNGYYTLLSNIYAEEG 715
            NG +    + + E G
Sbjct: 247 QNGLFKEAVDKFKEMG 262



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 13/184 (7%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC NL  L    + H   L +GL      S  LI  Y + GSL  +  +F   K  D   
Sbjct: 380 SCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS 439

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L+  Y       E+I L+  M+          +  VL ACS  G +  G        
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGY----HYF 495

Query: 123 KCGFDKDDVIQ-----TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNAD 176
           +C   +  +       T ++      G L++A+   ++M  S D + W+++++S   N +
Sbjct: 496 ECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGN 555

Query: 177 VSEG 180
           +  G
Sbjct: 556 LEIG 559


>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 216/649 (33%), Positives = 341/649 (52%), Gaps = 46/649 (7%)

Query: 130 DVIQTSI-LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           ++I T+I +  Y +   LD AR++FD+M  R VVSW+++I+SY  +   SE L + +SM 
Sbjct: 31  EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 90

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R  ++    T  S+   C  L  LR  + IH  VL+   +    +G++ +  Y+ C ++ 
Sbjct: 91  RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 150

Query: 249 SAERTF-------------------------------VKIEKRCTTSWTAMISCYNRSG- 276
            A R F                               VK+ +R   +WT +IS ++++G 
Sbjct: 151 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 210

Query: 277 WFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-Y 334
              KALE F  M+   E  PN  T   V+ +C  LG L  G++VH  +++ G+  EYD  
Sbjct: 211 GCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGL--EYDPS 268

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G AL+EFY EC  + +  +V   +    + + N LI      G  ++A EL+    T  
Sbjct: 269 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDA-ELVFNGMT-E 326

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
           + P S+++     A G  G +    ++     K+ C+  F  +++I +YS+ G  + A  
Sbjct: 327 MNPVSYNLMIKGYAVG--GQMDDSKRLFE---KMPCRTIFSSNTMISVYSRNGEIDKALE 381

Query: 455 LFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           LFE  + +K  V WNSMI G+  +G   EA+ L+  M+   ++  + TF     ACS +G
Sbjct: 382 LFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLG 441

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L +G+ +H  LI      ++Y+ T+L DMY+KCG +  AQ  F S+   NV +W+A+I+
Sbjct: 442 SLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALIN 501

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            +  HG  ++A SLF +M++ G+ PN  TF+ +L ACS +G V EG   F++M R + V 
Sbjct: 502 GHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVT 561

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P L+HYAC+VDLL RSG I  A + I  MP  A+G +WGALL+ C     ++V + + ++
Sbjct: 562 PTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEK 621

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +          Y +LSNIYA  G W E   VR I+    +KK PG S I
Sbjct: 622 MFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWI 670



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 149/600 (24%), Positives = 266/600 (44%), Gaps = 46/600 (7%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN 95
           I +YA+   L  +R +FD   +     W  +I  Y  +  F E++ L + M R    +S 
Sbjct: 39  ISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSE 98

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD- 154
             + SVL  C+ L  L  G+ +H  ++K G +  +++ +++L  Y     + +AR+VFD 
Sbjct: 99  STFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDV 158

Query: 155 ------------------------------KMTSRDVVSWSSIIASYFDNAD-VSEGLKM 183
                                         KM  RDVV+W+++I+ +  N D   + L++
Sbjct: 159 LVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEI 218

Query: 184 FHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           F  M+R G   P+  T   +  ACG L  L   R++HG +++  ++ D  +G + +  Y 
Sbjct: 219 FRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYC 278

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           +C  +  A R    +   C  +  ++I      G  + A   F  M E+    N ++   
Sbjct: 279 ECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEM----NPVSYNL 334

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GE 361
           ++   A  G + + K +      + M     +    +I  Y+  G++ +  ++      E
Sbjct: 335 MIKGYAVGGQMDDSKRLF-----EKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE 389

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++ ++WN +IS Y   G  +EAL+L + M    +     + ++   AC  +GSL  G  +
Sbjct: 390 KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLL 449

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H H+IK   +   +V +SLIDMYSKCG    A   F  I   +V  W ++I G   +G  
Sbjct: 450 HAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLG 509

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTA 539
            EAI+LF +M    L  +  TF+  + ACS  G + +G  + H +   Y V   +     
Sbjct: 510 SEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYAC 569

Query: 540 LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           + D+  + G ++ A+     M  E + V W A++        L     + ++M     KP
Sbjct: 570 VVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKP 629



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 59/454 (12%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR    +H  +L +G        + L+  YA    +  +R VFD     +  +W++++  
Sbjct: 114 LRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVG 173

Query: 70  YMWNNFFEESILLYHKMIRE---------------------------------QATISNF 96
           Y+  N  ++++ ++ KM R                                  + T + F
Sbjct: 174 YVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEF 233

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
            +  V+RAC  LG L  G  VHG ++KCG + D  I  +++  Y E   +DDA +V   +
Sbjct: 234 TFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGV 293

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG-------EL 209
            +  + + +S+I        + +   +F+ M    + P    ++    A G        L
Sbjct: 294 VNPCLNALNSLIEGLISMGRIEDAELVFNGMTE--MNPVSYNLMIKGYAVGGQMDDSKRL 351

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSWTA 267
               P R+I                N+ I +YS+ G++  A   F   K EK   T W +
Sbjct: 352 FEKMPCRTIFS-------------SNTMISVYSRNGEIDKALELFEETKNEKDPVT-WNS 397

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MIS Y  SG  ++AL+ ++ M  +  +    T   +  +C+ LG L +G+ +H  +I+  
Sbjct: 398 MISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTP 457

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                 Y+G +LI+ Y++CG + E +    +I   N+ +W  LI+ +A  G+  EA+ L 
Sbjct: 458 FESNV-YVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLF 516

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            +M   GL P+  +    LSAC   G +  G++I
Sbjct: 517 DRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKI 550



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 180/376 (47%), Gaps = 15/376 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  L  L+    +H  L+  GL YDP     L+E Y E  ++  +  V      P 
Sbjct: 238 VVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPC 297

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
                 LI+  +     E++ L+++ M  E   +S   Y  +++  +  G +   +++  
Sbjct: 298 LNALNSLIEGLISMGRIEDAELVFNGMT-EMNPVS---YNLMIKGYAVGGQMDDSKRLFE 353

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVS 178
           ++  C   +      +++  Y   G +D A ++F++  + +D V+W+S+I+ Y  +    
Sbjct: 354 KM-PC---RTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 409

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E LK++ +M R  ++    T  +L  AC  L SL   + +H H+++   + +  +G S I
Sbjct: 410 EALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLI 469

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKCG ++ A+ +FV I      +WTA+I+ +   G   +A+  F +M+E    PN  
Sbjct: 470 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGA 529

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           T + VL +C+  G + EG  +   + R   + P  ++    +++     G + E E+ I 
Sbjct: 530 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYA-CVVDLLGRSGHIREAEEFIK 588

Query: 358 AIG-ERNILSWNMLIS 372
            +  E + + W  L+S
Sbjct: 589 KMPLEADGVVWGALLS 604


>gi|218546775|sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
          Length = 736

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 209/653 (32%), Positives = 340/653 (52%), Gaps = 14/653 (2%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           F++P V +AC+ L  L  G  +   ++K GF+    +  SI   Y + G L    + FD 
Sbjct: 48  FVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDC 107

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M SRD VSW+ I+    D     EGL  F  +   G EP+  T++ +  AC  L      
Sbjct: 108 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDG 165

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             IHG+V+R        + NS + MY+   D LSA + F ++ +R   SW+ +I  Y +S
Sbjct: 166 EKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQS 224

Query: 276 GWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
                 L+ F +M+ E K EP+ +T+ +VL +C  +  +  G+SVH   IR+G      +
Sbjct: 225 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 284

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +LI+ Y++   +    +V      RNI+SWN +++ +       EALE+   M    
Sbjct: 285 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 344

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           +  D  +V S L  C           IHG +I+   + +E   SSLID Y+ C   + A 
Sbjct: 345 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 404

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            + + +  K VV  ++MI G    G S EAI++F  M       + +T ++ + ACS   
Sbjct: 405 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSA 461

Query: 514 QLEKGKWVHHKLISYGVR-KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
            L   KW H   I   +   DI + T++ D YAKCG ++ A+R FD ++E+N++SW+ +I
Sbjct: 462 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 521

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             Y ++G  + A +LF +M   G  PN VT++  L AC+H G V++G   F +M     +
Sbjct: 522 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 581

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALLNGC--RIHKRIDVMKT 688
           P LQHY+C+VD+LSR+G+I+ A ++I ++P    A  S WGA+L+GC  R  K I   + 
Sbjct: 582 PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEV 641

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + L +     +GY  L S+ +A E +W++   +R +++   ++ V GYS +
Sbjct: 642 VAEVLELEPLCSSGYL-LASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 693



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 170/567 (29%), Positives = 288/567 (50%), Gaps = 14/567 (2%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F++C  L  L +   + A LL  G          + + Y + G L S    FD     D
Sbjct: 53  VFKACAKLSWLFQGRCIQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRD 112

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
           S  W V++   +   F EE +  + K+       +      V+ AC SL     GEK+HG
Sbjct: 113 SVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHG 170

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+ GF     +Q SILC Y +   L  ARK+FD+M+ RDV+SWS +I SY  + +   
Sbjct: 171 YVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVV 229

Query: 180 GLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSF 237
           GLK+F  MV E   EPD VT+ S+ +AC  +  +   RS+HG  +RR   + D  + NS 
Sbjct: 230 GLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSL 289

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSK  D+ SA R F +   R   SW ++++ +  +  + +ALE F  M++   E + 
Sbjct: 290 IDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDE 349

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T++++L  C         KS+H  IIR+G       L  +LI+ Y  C  + +   V+ 
Sbjct: 350 VTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALS-SLIDAYTSCSLVDDAGTVLD 408

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           ++  ++++S + +IS  A  G S EA+ +   M+     P++ +V S L+AC     L+ 
Sbjct: 409 SMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRT 465

Query: 418 GLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
               HG  I+  +   D  V +S++D Y+KCG   +A   F++I +K+++ W  +I  + 
Sbjct: 466 SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYA 525

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
            NG   +A+ LF +M       + VT+L A+ AC++ G ++KG  +   ++    +  + 
Sbjct: 526 INGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ 585

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSE 562
             + + DM ++ G++ TA  +  ++ E
Sbjct: 586 HYSCIVDMLSRAGEIDTAVELIKNLPE 612



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 245/465 (52%), Gaps = 10/465 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H +++ +G          ++  YA+  SL S+R +FD   E D   W+V+I+ Y+ + 
Sbjct: 167 KIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSK 225

Query: 75  FFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-I 132
                + L+ +M+ E  T  + +   SVL+AC+ + D+  G  VHG  I+ GFD  DV +
Sbjct: 226 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFV 285

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             S++  Y +   +D A +VFD+ T R++VSW+SI+A +  N    E L+MFH MV+E V
Sbjct: 286 CNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAV 345

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           E D VT++SL   C       P +SIHG ++RR  + +    +S I  Y+ C  +  A  
Sbjct: 346 EVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGT 405

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
               +  +   S + MIS    +G   +A+  F  M   ++ PN IT+I++L +C+    
Sbjct: 406 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSAD 462

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           LR  K  H   IR+ +      +G ++++ YA+CG +    +    I E+NI+SW ++IS
Sbjct: 463 LRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIIS 522

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            YA  G+  +AL L  +M+  G  P++ +  ++LSAC + G ++ GL I   +++ D K 
Sbjct: 523 AYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKP 582

Query: 433 EFVQ-SSLIDMYSKCGFKNLAYLLFERIQQ---KSVVMWNSMICG 473
                S ++DM S+ G  + A  L + + +        W +++ G
Sbjct: 583 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 627



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 13/157 (8%)

Query: 455 LFERIQQKSVV-MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           L  +I+Q SV   W  ++ G+ +   +    N            D   F    +AC+ + 
Sbjct: 14  LSSKIKQASVSGKWREVVSGYSEIQRAGVQFN------------DPFVFPIVFKACAKLS 61

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L +G+ +   L+  G    + +  ++ D Y KCGDL +  R FD M+ R+ VSW+ ++ 
Sbjct: 62  WLFQGRCIQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVF 121

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
               +G   +    F ++   G +PN  T + ++ AC
Sbjct: 122 GLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC 158


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 178/531 (33%), Positives = 299/531 (56%), Gaps = 4/531 (0%)

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           LR  + +H  ++         L N  + MYSKCG+L  A + F  + +R   SWTAMIS 
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            +++  F +A+ +F  M    E P      + + +CA LG +  GK +HC  ++ G+G E
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             ++G  L + Y++CG M +  KV   +  ++ +SW  +I  Y++ G  +EAL    +M 
Sbjct: 141 L-FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKN 450
              +  D   + S+L ACG + + + G  +H  V+K+  + D FV ++L DMYSK G   
Sbjct: 200 DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259

Query: 451 LAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            A  +F    + ++VV +  +I G+ +     + +++F ++    +E +E TF + I+AC
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +N   LE+G  +H +++     +D ++ + L DMY KCG L+ A + FD + +   ++W+
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWN 379

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           +++  +G HG   DA   F++M+D G+KPN +TF+++L  CSH+G VEEG  YF +M + 
Sbjct: 380 SLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT 439

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           +GV P  +HY+C++DLL R+G ++ A + I+ MPF  N   W + L  CRIH   ++ K 
Sbjct: 440 YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKL 499

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             ++L      ++G   LLSNIYA E  W++   VR  M    +KK+PGYS
Sbjct: 500 AAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYS 550



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 260/499 (52%), Gaps = 12/499 (2%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+R+   +++     V++  +    L  G+++H  +I  G+     +   ++  Y + G 
Sbjct: 1   MLRDTNALAH-----VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE 55

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           LD A K+FD M  R++VSW+++I+    N+  SE ++ F  M   G  P      S   A
Sbjct: 56  LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRA 115

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C  L S+   + +H   L+  I  +  +G++   MYSKCG +  A + F ++  +   SW
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 175

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           TAMI  Y++ G F++AL +F KM++ +   +   L + LG+C  L   + G+SVH  +++
Sbjct: 176 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVK 235

Query: 326 KGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGMSKEA 383
             +G E D ++G AL + Y++ G M     V     E RN++S+  LI  Y      ++ 
Sbjct: 236 --LGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKG 293

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDM 442
           L + V+++  G+ P+ F+ +S + AC N  +L+ G Q+H  V+KI+  +D FV S L+DM
Sbjct: 294 LSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDM 353

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y KCG    A   F+ I   + + WNS++  F Q+G   +AI  F +M    ++ + +TF
Sbjct: 354 YGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITF 413

Query: 503 LTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           ++ +  CS+ G +E+G  + +    +YGV       + + D+  + G L+ A+   + M 
Sbjct: 414 ISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP 473

Query: 562 -ERNVVSWSAMIDCYGMHG 579
            E N   W + +    +HG
Sbjct: 474 FEPNAFGWCSFLGACRIHG 492



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 211/413 (51%), Gaps = 6/413 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           LR+  +LHA L+  G  Y P    +  L+  Y++ G L  +  +FDT  + +   W  +I
Sbjct: 21  LRRGKQLHALLICAG--YTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
                N+ F E+I  +  M       + F + S +RAC+SLG +  G+++H   +K G  
Sbjct: 79  SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG 138

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            +  + +++   Y + G + DA KVF++M  +D VSW+++I  Y    +  E L  F  M
Sbjct: 139 SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           + E V  D   + S   ACG L + +  RS+H  V++   + D  +GN+   MYSK GD+
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDM 258

Query: 248 LSAERTF-VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
            SA   F +  E R   S+T +I  Y  +   +K L  FV++     EPN  T  +++ +
Sbjct: 259 ESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA 318

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA    L +G  +H Q+++     E  ++   L++ Y +CG +    +    IG+   ++
Sbjct: 319 CANQAALEQGTQLHAQVMKINF-DEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIA 377

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
           WN L+S + + G+ K+A++   +M   G+ P++ +  S L+ C + G ++ GL
Sbjct: 378 WNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---KIDCKDEFVQSSLIDMYSKCGFKNL 451
           ++ D+ ++A  +        L+ G Q+H  +I      C   F+ + L++MYSKCG  + 
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCT--FLTNHLVNMYSKCGELDH 58

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  LF+ + Q+++V W +MI G  QN    EAI  F  M +      +  F +AI+AC++
Sbjct: 59  ALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +G +E GK +H   + +G+  ++++ + L DMY+KCG +  A +VF+ M  ++ VSW+AM
Sbjct: 119 LGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           ID Y   G+  +A   FK+M+D  +  ++    + L AC    + + G+   +++   G 
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           E D+     + D+ S++GD+E A     S  F  +      +   C I   ++  + IEK
Sbjct: 239 ESDIFVGNALTDMYSKAGDMESA-----SNVFGIDSECRNVVSYTCLIDGYVET-EQIEK 292

Query: 692 ELSV 695
            LSV
Sbjct: 293 GLSV 296


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 177/560 (31%), Positives = 295/560 (52%), Gaps = 44/560 (7%)

Query: 189 REGVEPDFVTMLSLAEACGELCSLRP----ARSIHGHVL-RRKIKIDGPLGNSFIVMYSK 243
           +  + P F  +    + C ++  + P     + +H  +L  + +  +  LG   +  Y+ 
Sbjct: 26  KPQLSPKFTALTE--DLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAA 83

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG+       F +I  +    +  MI  Y  +G +Q AL  F  M      P+  T   V
Sbjct: 84  CGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCV 143

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +C+  G L  G  +H  +++ G+     Y+G  L+  Y +C  +    +V+  +  R+
Sbjct: 144 LKACSVSGNLWVGLQIHGAVVKLGLDMNL-YIGNGLVSMYGKCKWLDAARRVLDEMPGRD 202

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SWN +++ YA+ G   +AL+L  +M+   L PD+ ++ S L A  N            
Sbjct: 203 MVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN------------ 250

Query: 424 HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSL 481
                               + C   N+ Y+  +F ++++KS++ WN MI  +  N    
Sbjct: 251 --------------------TSC--DNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPN 288

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           EA++L+ QM ++ +E D V+  + + AC ++     G+ +H  +    +R ++ ++ AL 
Sbjct: 289 EAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALI 348

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           DMYAKCG L+ A+ VFD M  R+VVSW++MI  YGM GQ  DA +LFK+M DSG  P+ +
Sbjct: 349 DMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWI 408

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            F+++L ACSH+G V+EG++ FN M  +G+ P ++HY CMVDLL R+G I+ A+ +   M
Sbjct: 409 AFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQM 468

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
           P   N  +WG+LL+ CR++  +++       L       +GYY LLSNIYA+ G W +  
Sbjct: 469 PMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVE 528

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
            VRSIM   G+KK+PG S +
Sbjct: 529 TVRSIMNSKGIKKIPGNSNV 548



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 209/409 (51%), Gaps = 35/409 (8%)

Query: 11  RKLTRLHAHLLV-TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           + L +LH+ +L+   LH +P    +L+ +YA  G    +R +FD   + +   + V+I+ 
Sbjct: 52  KTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRS 111

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y+ N  +++++L++  M  +     N+ YP VL+ACS  G+L  G ++HG ++K G D +
Sbjct: 112 YVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMN 171

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             I   ++  YG+   LD AR+V D+M  RD+VSW+S++A Y  N   ++ LK+   M  
Sbjct: 172 LYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMED 231

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
             ++PD           G + SL PA                       V  + C ++L 
Sbjct: 232 LKLKPD----------AGTMGSLLPA-----------------------VTNTSCDNVLY 258

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
            +  FVK++++   SW  MI+ Y  +    +A++ +++M     EP+ +++ +VL +C  
Sbjct: 259 VKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGD 318

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L     G+ +H  + RK + P    L  ALI+ YA+CG + E   V   +  R+++SW  
Sbjct: 319 LSAAVLGRRIHEYVERKKLRPNL-LLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTS 377

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +IS Y   G  K+A+ L  +M+  G  PD  +  S L+AC + G +  G
Sbjct: 378 MISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEG 426


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/541 (34%), Positives = 300/541 (55%), Gaps = 49/541 (9%)

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           S  G+L  A   F  IE+     W  MI   + S     A++ +V+ML    EPN  T  
Sbjct: 77  SPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFP 136

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE-------- 353
            +L SCA +G  +EGK +H  +++ G+  +  ++  +LI  YA+ G++   E        
Sbjct: 137 FLLKSCAKVGATQEGKQIHGHVLKLGLESD-PFVHTSLINMYAQNGELGYAELVFSKSSL 195

Query: 354 -----------------------KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
                                  ++   I  R+ +SWN +I+ YA+ G  +EAL    +M
Sbjct: 196 RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLG----LQIHGHVIKIDCKDEFVQSSLIDMYSKC 446
           +   + P+  ++ + LSAC   GSL+LG      I  H +  + +   + ++LIDMYSKC
Sbjct: 256 KRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLR---LVNALIDMYSKC 312

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  + A  LFE I +K ++ WN MI G+    +  EA+ LF +M  + +E ++VTF++ +
Sbjct: 313 GDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSIL 372

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRK-----DIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            AC+ +G L+ GKW+H    +Y  +K     +  + T+L DMYAKCG+++ A++VF  M 
Sbjct: 373 PACAYLGALDLGKWIH----AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK 428

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
            +++ SW+AMI    MHG  N A  LF+QM D G +P+++TF+ +L ACSH+G VE G+ 
Sbjct: 429 PKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQ 488

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            F++M   + + P LQHY CM+DLL R+G  + A  ++ +M    +G+IWG+LL  CR+H
Sbjct: 489 CFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVH 548

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
             +++ +   K L      + G Y LLSNIYA  G WD+  ++R+ +   G+KKVPG S+
Sbjct: 549 GNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSS 608

Query: 741 I 741
           I
Sbjct: 609 I 609



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 263/515 (51%), Gaps = 36/515 (6%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEP 58
           + L  +C + + L ++H+ ++ TGLH    A ++LIE  + +  G+L  + L+F++ ++P
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + F+W  +I+    ++    +I  Y +M+      +++ +P +L++C+ +G    G+++H
Sbjct: 96  NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155

Query: 119 GRIIKCGFDKDDVIQTSILCTY---GEFG----------------------------CLD 147
           G ++K G + D  + TS++  Y   GE G                            CLD
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DAR++F+++  RD VSW+++IA Y  +    E L  F  M R  V P+  TM+++  AC 
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           +  SL     +   +    +  +  L N+ I MYSKCGDL  A   F  I ++   SW  
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  Y+    +++AL  F KM +   EPN +T +++L +CA LG L  GK +H  I +K 
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +G     L  +LI+ YA+CG +   ++V   +  +++ SWN +IS  A  G +  ALEL 
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELF 455

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQ-SSLIDMYSK 445
            QM+  G  PD  +    LSAC + G ++LG Q    +++  D   +      +ID+  +
Sbjct: 456 RQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGR 515

Query: 446 CGFKNLAYLLFERIQQKSV-VMWNSMICGFYQNGN 479
            G  + A  L + ++ K    +W S++     +GN
Sbjct: 516 AGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGN 550



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 167/575 (29%), Positives = 272/575 (47%), Gaps = 84/575 (14%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL--CTYGEFGCLDDARKVFDKMT 157
           ++L  C S  +L   +++H +IIK G        + ++  C    FG L  A  +F+ + 
Sbjct: 37  TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             +   W+++I     ++     +  +  M+  GVEP+  T   L ++C ++ + +  + 
Sbjct: 94  QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE-------------------------- 251
           IHGHVL+  ++ D  +  S I MY++ G+L  AE                          
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213

Query: 252 -----RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
                R F +I  R   SW AMI+ Y +SG F++AL  F +M      PN  T++TVL +
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA  G L  G  V   I   G+G     +  ALI+ Y++CG + +   +   I E++I+S
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVN-ALIDMYSKCGDLDKARDLFEGICEKDIIS 332

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN++I  Y+     KEAL L  +MQ   + P+  +  S L AC  +G+L LG  IH ++ 
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392

Query: 427 K--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           K  +   +  + +SLIDMY+KCG    A  +F  ++ KS+  WN+MI G   +G++  A+
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMAL 452

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF QM     E D++TF+  + ACS+ G +E G+                         
Sbjct: 453 ELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR------------------------- 487

Query: 545 AKCGDLQTAQRVFDSMSERNVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
                     + F SM E   +S     +  MID  G  G  ++A +L K M    +KP+
Sbjct: 488 ----------QCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNM---EMKPD 534

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
              + ++L AC   G+VE G+  F A  +F +EP+
Sbjct: 535 GAIWGSLLGACRVHGNVELGE--FAAKHLFELEPE 567



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 233/456 (51%), Gaps = 48/456 (10%)

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           FQ   +   K+L+    P+L    T+L +C     L   K +H QII+ G+     +   
Sbjct: 19  FQPTSDPPYKLLQ--NHPSL----TLLSTCKSFQNL---KQIHSQIIKTGLH-NTQFALS 68

Query: 338 ALIEFYA--ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            LIEF A    G +S    +  +I + N   WN +I   +       A++  V+M   G+
Sbjct: 69  KLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGV 128

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYL 454
            P+S++    L +C  VG+ Q G QIHGHV+K+  + D FV +SLI+MY++ G    A L
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188

Query: 455 -------------------------------LFERIQQKSVVMWNSMICGFYQNGNSLEA 483
                                          LFE I  +  V WN+MI G+ Q+G   EA
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEA 248

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +  F +M    +  +E T +T + AC+  G LE G WV   +  +G+  ++ +  AL DM
Sbjct: 249 LAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDM 308

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCGDL  A+ +F+ + E++++SW+ MI  Y       +A +LF++M  S ++PN+VTF
Sbjct: 309 YSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTF 368

Query: 604 MNILWACSHSGSVEEGKFY--FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           ++IL AC++ G+++ GK+   +   +  G+  +   +  ++D+ ++ G+IE A ++   M
Sbjct: 369 VSILPACAYLGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGNIEAAKQVFAGM 427

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
              + GS W A+++G  +H   ++   + +++   G
Sbjct: 428 KPKSLGS-WNAMISGLAMHGHANMALELFRQMRDEG 462


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 209/687 (30%), Positives = 348/687 (50%), Gaps = 41/687 (5%)

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHG----RIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
           + +F  P   ++ ++L  L +   +HG    R +  GF     +  ++L  Y   G L  
Sbjct: 57  LDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTP--AVANALLTAYARCGDLTA 114

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A  +F+ M SRD V+++S+IA+          L     M+ EG      T++S+  AC  
Sbjct: 115 ALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSH 174

Query: 209 LC-SLRPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLLSAERTFVKIEKRCT-- 262
           L   LR  R  H   L+    +DG      N+ + MY++ G +  A+  F  ++   +  
Sbjct: 175 LAEDLRLGREAHAFALKNGF-LDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPG 233

Query: 263 ---TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
               +W  M+S   +SG   +A+E    M+     P+ IT  + L +C+ L  L  G+ +
Sbjct: 234 GGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREM 293

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARK 377
           H  +++        ++  AL++ YA   ++    +V   +  G R +  WN ++  YA+ 
Sbjct: 294 HAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQA 353

Query: 378 GMSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FV 435
           GM +EALEL  +M+   G++P   ++A  L AC    +      +HG+V+K    D  FV
Sbjct: 354 GMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFV 413

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM----- 490
           Q++L+D+Y++ G    A  +F  I+ + VV WN++I G    G+  +A  L  +M     
Sbjct: 414 QNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGR 473

Query: 491 YLNCLEMD-------------EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           + +    D              VT +T +  C+ +    KGK +H   + + +  DI + 
Sbjct: 474 FTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVG 533

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-I 596
           +AL DMYAKCG L  ++ VFD + +RNV++W+ +I  YGMHG  ++A +LF +M+ S   
Sbjct: 534 SALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEA 593

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
           KPNEVTF+  L ACSHSG V+ G   F++M R  GV+P    +AC VD+L R+G ++ A+
Sbjct: 594 KPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAY 653

Query: 656 KMIHSM-PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
            +I SM P     S W + L  CR+H+ + + +   + L     ++  +Y LL NIY+  
Sbjct: 654 SIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAA 713

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G W++  +VR+ M   G+ K PG S I
Sbjct: 714 GLWEKSSEVRNRMRQRGVSKEPGCSWI 740



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 188/680 (27%), Positives = 331/680 (48%), Gaps = 56/680 (8%)

Query: 2   PLFRSCTNLRKLTRLH----AHLLVTGLH-YDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           P  +S   LR L  +     A L    LH + P  +  L+ +YA  G L ++  +F+   
Sbjct: 64  PAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMP 123

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGSGE 115
             D+  +  LI        +  ++     M+ E   +S+F   SVL ACS L  DL  G 
Sbjct: 124 SRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGR 183

Query: 116 KVHGRIIKCGF-DKDDVIQ-TSILCTYGEFGCLDDARKVFDKMTSRD-----VVSWSSII 168
           + H   +K GF D D+     ++L  Y   G +DDA+ +F  + + D     VV+W++++
Sbjct: 184 EAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMV 243

Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR-RKI 227
           +    +    E +++ + MV  GV PD +T  S   AC +L  L   R +H +VL+   +
Sbjct: 244 SLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDL 303

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             +  + ++ + MY+    +  A R F  V    R    W AM+  Y ++G  ++ALE F
Sbjct: 304 AANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELF 363

Query: 286 VKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
            +M  E    P+  T+  VL +CA        ++VH  ++++GM  +  ++  AL++ YA
Sbjct: 364 ARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMA-DNPFVQNALMDLYA 422

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG---------- 394
             G M     +  AI  R+++SWN LI+    +G   +A +L+ +MQ  G          
Sbjct: 423 RLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDG 482

Query: 395 --------LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYS 444
                   ++P++ ++ + L  C  + +   G +IHG+ ++  +D  D  V S+L+DMY+
Sbjct: 483 IAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALD-SDIAVGSALVDMYA 541

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLEMDEVTFL 503
           KCG   L+  +F+R+ +++V+ WN +I  +  +G   EAI LF +M + N  + +EVTF+
Sbjct: 542 KCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFI 601

Query: 504 TAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-- 560
            A+ ACS+ G +++G  + H +  ++GV+    +     D+  + G L  A  +  SM  
Sbjct: 602 AALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEP 661

Query: 561 SERNVVSWSAMIDCYGMHGQLN----DAASLFKQMLDSGIKPNEVTFMNILWAC-SHSGS 615
            E+ V +WS+ +    +H  +      A  LF+      ++P+E +   +L    S +G 
Sbjct: 662 GEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQ------LEPDEASHYVLLCNIYSAAGL 715

Query: 616 VEEGKFYFNAMRIFGV--EP 633
            E+     N MR  GV  EP
Sbjct: 716 WEKSSEVRNRMRQRGVSKEP 735


>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 216/649 (33%), Positives = 340/649 (52%), Gaps = 46/649 (7%)

Query: 130 DVIQTSI-LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           ++I T+I +  Y +   LD AR++FD+M  R VVSW+++I+SY  +   SE L + +SM 
Sbjct: 71  EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 130

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R  ++    T  S+   C  L  LR  + IH  VL+   +    +G++ +  Y+ C ++ 
Sbjct: 131 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 190

Query: 249 SAERTF-------------------------------VKIEKRCTTSWTAMISCYNRSG- 276
            A R F                               VK+ +R   +WT +IS ++++G 
Sbjct: 191 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 250

Query: 277 WFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-Y 334
              KALE F  M+   E  PN  T   V+ +C  LG L  G++VH  +++ G+  EYD  
Sbjct: 251 GCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGL--EYDPS 308

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G AL+EFY EC  + +  +V   +    + + N LI      G  ++A EL+    T  
Sbjct: 309 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDA-ELVFNGMT-E 366

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
           + P S+++     A G  G +    ++     K+ C+  F  +++I +YS+ G  + A  
Sbjct: 367 MNPVSYNLMIKGYAVG--GQMDDSKRLFE---KMPCRTIFSSNTMISVYSRNGEIDKALE 421

Query: 455 LFERIQ-QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           LFE  + +K  V WNSMI G+  +G   EA+ L+  M+   ++    TF     ACS +G
Sbjct: 422 LFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLG 481

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L++G+ +H  LI      ++Y+ T+L DMY+KCG +  AQ  F S+   NV +W+A+I+
Sbjct: 482 SLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALIN 541

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            +  HG  ++A SLF  M++ G+ PN  TF+ +L ACS +G V EG   F++M R + V 
Sbjct: 542 GHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVT 601

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P L+HYAC+VDLL RSG I  A + I  MP  A+G +WGALL+ C     ++V + + ++
Sbjct: 602 PTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEK 661

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +          Y +LSNIYA  G W E   VR I+    +KK PG S I
Sbjct: 662 MFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWI 710



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/600 (25%), Positives = 266/600 (44%), Gaps = 46/600 (7%)

Query: 36  IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN 95
           I +YA+   L  +R +FD   +     W  +I  Y  +  F E++ L + M R    +S 
Sbjct: 79  ISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSE 138

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD- 154
             + SVL  C+ L  L  G+ +H  ++K G +  +++ +++L  Y     + +AR+VFD 
Sbjct: 139 STFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDV 198

Query: 155 ------------------------------KMTSRDVVSWSSIIASYFDNAD-VSEGLKM 183
                                         KM  RDVV+W+++I+ +  N D   + L+M
Sbjct: 199 LVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEM 258

Query: 184 FHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           F  M+R G   P+  T   +  ACG L  L   R++HG +++  ++ D  +G + +  Y 
Sbjct: 259 FRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYC 318

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           +C  +  A R    +   C  +  ++I      G  + A   F  M E+    N ++   
Sbjct: 319 ECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEM----NPVSYNL 374

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI-GE 361
           ++   A  G + + K +      + M     +    +I  Y+  G++ +  ++      E
Sbjct: 375 MIKGYAVGGQMDDSKRLF-----EKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE 429

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           ++ ++WN +IS Y   G  +EAL+L + M    +     + ++   AC  +GSLQ G  +
Sbjct: 430 KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLL 489

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H H+IK   +   +V +SLIDMYSKCG    A   F  I   +V  W ++I G   +G  
Sbjct: 490 HAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLG 549

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTA 539
            EAI+LF  M    L  +  TF+  + ACS  G + +G  + H +   Y V   +     
Sbjct: 550 SEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYAC 609

Query: 540 LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
           + D+  + G ++ A+     M  E + V W A++        L     + ++M     KP
Sbjct: 610 VVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKP 669



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 59/454 (12%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR    +H  +L +G        + L+  YA    +  +R VFD     +  +W++++  
Sbjct: 154 LRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVG 213

Query: 70  YMWNNFFEESILLYHKMIRE---------------------------------QATISNF 96
           Y+  N  ++++ ++ KM R                                  + T + F
Sbjct: 214 YVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEF 273

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
            +  V+RAC  LG L  G  VHG ++KCG + D  I  +++  Y E   +DDA +V   +
Sbjct: 274 TFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGV 333

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG-------EL 209
            +  + + +S+I        + +   +F+ M    + P    ++    A G        L
Sbjct: 334 VNPCLNALNSLIEGLISMGRIEDAELVFNGMTE--MNPVSYNLMIKGYAVGGQMDDSKRL 391

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSWTA 267
               P R+I                N+ I +YS+ G++  A   F   K EK   T W +
Sbjct: 392 FEKMPCRTIFS-------------SNTMISVYSRNGEIDKALELFEETKNEKDPVT-WNS 437

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MIS Y  SG  ++AL+ ++ M  +  +    T   +  +C+ LG L++G+ +H  +I+  
Sbjct: 438 MISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTP 497

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                 Y+G +LI+ Y++CG + E +    +I   N+ +W  LI+ +A  G+  EA+ L 
Sbjct: 498 FESNV-YVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLF 556

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
             M   GL P+  +    LSAC   G +  G++I
Sbjct: 557 DXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKI 590



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 180/376 (47%), Gaps = 15/376 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C  L  L+    +H  L+  GL YDP     L+E Y E  ++  +  V      P 
Sbjct: 278 VVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPC 337

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
                 LI+  +     E++ L+++ M  E   +S   Y  +++  +  G +   +++  
Sbjct: 338 LNALNSLIEGLISMGRIEDAELVFNGMT-EMNPVS---YNLMIKGYAVGGQMDDSKRLFE 393

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVS 178
           ++  C   +      +++  Y   G +D A ++F++  + +D V+W+S+I+ Y  +    
Sbjct: 394 KM-PC---RTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 449

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E LK++ +M R  ++    T  +L  AC  L SL+  + +H H+++   + +  +G S I
Sbjct: 450 EALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLI 509

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSKCG ++ A+ +FV I      +WTA+I+ +   G   +A+  F  M+E    PN  
Sbjct: 510 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGA 569

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           T + VL +C+  G + EG  +   + R   + P  ++    +++     G + E E+ I 
Sbjct: 570 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYA-CVVDLLGRSGHIREAEEFIK 628

Query: 358 AIG-ERNILSWNMLIS 372
            +  E + + W  L+S
Sbjct: 629 KMPLEADGVVWGALLS 644


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 204/755 (27%), Positives = 378/755 (50%), Gaps = 29/755 (3%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           CT LR +    R+H H+  + +  +      L+  YA  G+   +R +FD     +   +
Sbjct: 73  CTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHNVLSF 132

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVL----RACSSLGDLGSGEKVHG 119
             +++ Y+     +E++ + H + R +A  ++   PS+L     A     DL  G   H 
Sbjct: 133 TAIMRAYVTAGDPDEALKILH-LARLKAFKAD---PSMLAMAVEAAGMKRDLSLGRFFHD 188

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM----TSRDVVSWSSIIASYFDNA 175
            I +CG+D D  +  S++  Y   G ++ A + FD+      S DVVSW+ I+A+  ++ 
Sbjct: 189 TIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHR 248

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D    L +F  M  +GV PD +  +++ ++   L  +   + IH  VL R+++ D  +G 
Sbjct: 249 DYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGT 308

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY++ G +  A R F +I++    +WT ++  Y R G F   ++   +M     +P
Sbjct: 309 AVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKP 368

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSEC 352
           N +T IT+L +C  L  L +GK +   +  +      D    +G A+I  ++    M   
Sbjct: 369 NEVTFITILDTCKNLA-LEDGKKIQA-LASEQQQRSLDASARIGTAVIGMFSRFSSMILA 426

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            +    I ++++ ++  +I+ YA     +EAL +  +M    +  D+  +A ++SAC ++
Sbjct: 427 REAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASI 486

Query: 413 GSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             L+ G  +H   + +   +D+ V+++L+DMYS+CG    A  +F  I++   V W++MI
Sbjct: 487 PDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMI 546

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGV 530
               ++G+   A+ +  +M  +       T +  + AC++ G +E+  + VH  L+  G 
Sbjct: 547 AALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGF 606

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN---DAASL 587
             D  +  A+  MYAK G +Q A   FD +   +V +W+ M++ Y   G+ N    A  L
Sbjct: 607 DSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKL 666

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLS 646
            + M   G+ P++VTF++IL AC++ G ++E   YF  M+  +G+ P+++HY  +VD ++
Sbjct: 667 ARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVA 726

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
           R G ++ A  +I  +P   N  IW ALL  C+     D  +T ++   +    +N    L
Sbjct: 727 RKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQN--DAPRT-QRVGEIIMKINNKLDPL 783

Query: 707 LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +  +     W+E  +VR +M   G+KK PG S I
Sbjct: 784 GTGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMI 818



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 169/598 (28%), Positives = 305/598 (51%), Gaps = 21/598 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  VL+ C+ L  +  G +VH  I +   + +  +   ++  Y  FG   +AR++FD + 
Sbjct: 66  YQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLG 125

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA-EACGELCSLRPAR 216
           S +V+S+++I+ +Y    D  E LK+ H    +  + D  +ML++A EA G    L   R
Sbjct: 126 SHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKAD-PSMLAMAVEAAGMKRDLSLGR 184

Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA----ERTFVKIEKRCTTSWTAMISCY 272
             H  + R    +D  +  S I MYS CG++ +A    +R F++       SWT +++  
Sbjct: 185 FFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAAC 244

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           N    +  AL+ F +M E    P+ I  +TVL S  GLG + +GK +H  ++ + +  E 
Sbjct: 245 NEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDREL--ER 302

Query: 333 DYL-GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           D + G A+++ YA  G + +  +    I +  + +W +L+  Y R G     +++L +M+
Sbjct: 303 DSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERME 362

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD----EFVQSSLIDMYSKCG 447
             G+ P+  +  + L  C N+ +L+ G +I     +   +       + +++I M+S+  
Sbjct: 363 AEGVKPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFS 421

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
              LA   F++I QKSV  + +MI G+  N    EA+ +F +M    +  D +    AI 
Sbjct: 422 SMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAIS 481

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           AC++I  LE+GK +H   +  G+ +D  + TAL DMY++CG ++ A  VF  +   + V+
Sbjct: 482 ACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVA 541

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           WSAMI   G HG    A ++  +M   G +P+  T + +L AC+H+G +EE     +++ 
Sbjct: 542 WSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLL 601

Query: 628 I---FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHK 681
           +   F  +P+++ +A M  + ++ G I+ A      +  P +   W  +L   CR+ K
Sbjct: 602 VDGGFDSDPEVK-FAVM-RMYAKVGSIQEACNAFDKIENP-DVKAWTTMLEAYCRLGK 656



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 176/380 (46%), Gaps = 12/380 (3%)

Query: 3   LFRSCTNL-----RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           +  +C NL     +K+  L +      L       T +I  ++   S+  +R  FD   +
Sbjct: 376 ILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQ 435

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                +  +I  Y  N    E++ ++ +MIR +    N +    + AC+S+ DL  G+ +
Sbjct: 436 KSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKAL 495

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +  G  +DDV++T+++  Y   G ++DA  VF ++   D V+WS++IA+   + D 
Sbjct: 496 HCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAALGRHGDP 555

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL-RPARSIHGHVLRRKIKIDGPLGNS 236
              + M   M ++G  P   TM+ +  AC     +   AR +H  ++      D  +  +
Sbjct: 556 RGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFA 615

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ---KALESFVKMLEVKE 293
            + MY+K G +  A   F KIE     +WT M+  Y R G +    +AL+    M +   
Sbjct: 616 VMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGV 675

Query: 294 EPNLITLITVLGSCAGLGWLRE-GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            P+ +T + +L +CA  G L+E G+         G+ PE ++   AL++  A  G + E 
Sbjct: 676 MPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHY-VALVDTVARKGYLQEA 734

Query: 353 EKVIHAIG-ERNILSWNMLI 371
           E +I  +  + N + W  L+
Sbjct: 735 EDLIRMVPLQVNEIIWFALL 754



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 3/187 (1%)

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D  ++   +Q C+ +  + +G  VH  +    +  + ++   L  MYA  G+   A+R+F
Sbjct: 62  DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D +   NV+S++A++  Y   G  ++A  +         K +       + A      + 
Sbjct: 122 DGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLS 181

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS---IWGALL 674
            G+F+ + +R  G + D      ++ + S  G+IE A +        A  S    W  +L
Sbjct: 182 LGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKIL 241

Query: 675 NGCRIHK 681
             C  H+
Sbjct: 242 AACNEHR 248


>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
 gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
 gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 794

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 215/735 (29%), Positives = 360/735 (48%), Gaps = 32/735 (4%)

Query: 29  PPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESIL---LYHK 85
           P A+  LI  Y    SL  +R VFD   + +      ++  +  +  FE   +   L+ +
Sbjct: 22  PYANNNLISMYVRCSSLEQARKVFDKMPQRN------IVTLFGLSAVFEYVSMGSSLHSQ 75

Query: 86  MIREQATISNFIYP---------SVLRACSSLGDLGSGEKVHGRIIKCGF---DKDDVIQ 133
           +I+  +    F  P          + R C S+  L    ++H  ++  G     +     
Sbjct: 76  IIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYAN 135

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD-VSEGLKMFHSMVREGV 192
            +++  Y   G L+ ARKVFDKM  R+VVS++++ ++Y  N D  S    +   M  E V
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           +P+  T  SL + C  L  +    S++  +++     +  +  S + MYS CGDL SA R
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +  R   +W  MI    ++   +  L  F  ML    +P   T   VL  C+ LG 
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
              GK +H +II      +   L  AL++ Y  CG M E   V   I   N++SWN +IS
Sbjct: 316 YSLGKLIHARIIVSDSLADLP-LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS 374

Query: 373 EYARKGMSKEALEL---LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
             +  G  ++A+ +   L++M T    PD ++ ++++SA         G  +HG V K+ 
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMST--PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432

Query: 430 C-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             +  FV ++L+ MY K      A  +F+ ++++ VV+W  MI G  + GNS  A+  F 
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +MY      D  +  + I ACS++  L +G+  H   I  G    + +  AL DMY K G
Sbjct: 493 EMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNG 552

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
             +TA+ +F   S  ++  W++M+  Y  HG +  A S F+Q+L++G  P+ VT++++L 
Sbjct: 553 KYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-- 666
           ACSH GS  +GKF +N M+  G++   +HY+CMV+L+S++G ++ A ++I   P P N  
Sbjct: 613 ACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP-PGNNQ 671

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
             +W  LL+ C   + + +     +++      D   + LLSN+YA  G W++  ++R  
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRK 731

Query: 727 MEVTGLKKVPGYSTI 741
           +      K PG S I
Sbjct: 732 IRGLASSKDPGLSWI 746



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 218/452 (48%), Gaps = 13/452 (2%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           + L++ ++  G   +    T ++  Y+  G L S+R +FD     D+  W  +I   + N
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
           +  E+ ++ +  M+      + F Y  VL  CS LG    G+ +H RII      D  + 
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV- 192
            ++L  Y   G + +A  VF ++ + ++VSW+SII+   +N    + + M+  ++R    
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-----LGNSFIVMYSKCGDL 247
            PD  T  +   A  E     P R +HG +L  ++   G      +G + + MY K  + 
Sbjct: 399 RPDEYTFSAAISATAE-----PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREA 453

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            SA++ F  +++R    WT MI  ++R G  + A++ F++M   K   +  +L +V+G+C
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           + +  LR+G+  HC  IR G        G AL++ Y + GK    E +       ++  W
Sbjct: 514 SDMAMLRQGEVFHCLAIRTGFDCVMSVCG-ALVDMYGKNGKYETAETIFSLASNPDLKCW 572

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++  Y++ GM ++AL    Q+   G MPD+ +  S L+AC + GS   G  +   + +
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632

Query: 428 IDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFER 458
              K  F   S ++++ SK G  + A  L E+
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQ 664



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 177/366 (48%), Gaps = 14/366 (3%)

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML--ISEYARKGMSK 381
           +      EY Y    LI  Y  C  + +  KV   + +RNI++   L  + EY   G S 
Sbjct: 13  VETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSL 72

Query: 382 EALEL-LVQMQTWGLMPDSFSVASSL----SACGNVGSLQLGLQIHGHVIKIDC----KD 432
            +  + L   Q    MP +  +ASS+      C ++  L+   QIH  V+        + 
Sbjct: 73  HSQIIKLGSFQMIFFMPLN-EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATES 131

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMY 491
            +  ++LI MY +CG    A  +F+++  ++VV +N++   + +N + +  A  L   M 
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              ++ +  TF + +Q C+ +  +  G  ++ ++I  G   ++ + T++  MY+ CGDL+
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           +A+R+FD ++ R+ V+W+ MI     + ++ D    F+ ML SG+ P + T+  +L  CS
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311

Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
             GS   GK     + +     DL     ++D+    GD+  AF +   +  P N   W 
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP-NLVSWN 370

Query: 672 ALLNGC 677
           ++++GC
Sbjct: 371 SIISGC 376


>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Brachypodium distachyon]
          Length = 697

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 185/555 (33%), Positives = 306/555 (55%), Gaps = 8/555 (1%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLLSA 250
           V PD  T+  L +AC  L +L   R++H   +R      D  +  + + MY+KC  ++ +
Sbjct: 95  VRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGS 154

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAG 309
              +    +      T+M++ Y ++    +ALE F + +  +   P+ +TL++V+ + A 
Sbjct: 155 INAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQ 214

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
           L  +  G++ H  +IR     EYD  L  A++ FY   G +    ++   + E+++++W+
Sbjct: 215 LKDVLNGQACHAFVIRNNF--EYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWS 272

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +++ Y + G   EAL    +M   G+ P++ +V S + AC     ++ G ++H   +KI
Sbjct: 273 CMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKI 332

Query: 429 DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
            C+ E  V ++L+DMY KC     A  LF R+ +K  V W  +I GF QNG   E++ +F
Sbjct: 333 GCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVF 392

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
             M       D VT +  + ACS  G + +   +H  L+  G    I++  AL D+Y+KC
Sbjct: 393 KCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKC 452

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G+L  A RVF+S  E++VV WS+MI  YG+HG    A  LF+ M+ S +KPN +TF+++L
Sbjct: 453 GNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVL 512

Query: 608 WACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
            ACSHSG V+EGK  F +M +++GV P+  H++ MVDLL R+G+++ A K++H     A+
Sbjct: 513 SACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNG-RAD 571

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
              W ALL  CR H   ++ + +  +L     +  GYY LL+NIY  + NW    + R+I
Sbjct: 572 AHTWCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNI 631

Query: 727 MEVTGLKKVPGYSTI 741
           +   GL KVPG S +
Sbjct: 632 IRDRGLNKVPGCSAV 646



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 306/600 (51%), Gaps = 17/600 (2%)

Query: 14  TRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
            RLHAHLL +G LH     ++ ++ SY        +R +FD    P   +   L++ ++ 
Sbjct: 24  ARLHAHLLRSGHLHSSHHLTSHVLASYPT----GLARHLFDEIPVPTPRLANALLRAHVR 79

Query: 73  NNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFDKDD 130
              + +++LL   + +R  A    F    +L+AC+ L  L  G  +H   I+ C    D 
Sbjct: 80  ARQWCDALLLIPCLRVRPDA----FTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDA 135

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVR 189
            +  +++  Y +   +  +   ++  +  D+V  +S++  Y  N   +E L+ F   +V 
Sbjct: 136 FVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVG 195

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +G  P  VT++S+  A  +L  +   ++ H  V+R   + D  L N+ +  Y + G + +
Sbjct: 196 QGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQA 255

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A R F  + ++   +W+ M++ Y +SG   +AL ++ KM+E   +PN +T+++V+ +C+ 
Sbjct: 256 ARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSL 315

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
              + EG+ VH   ++ G   E   +  AL++ Y +C    E  ++   + +++ ++W +
Sbjct: 316 APDIEEGRRVHDIAVKIGCELEMT-VATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAV 374

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH-VIKI 428
           +IS + + G+  E++ +   M   G  PD+ ++   L+AC   G ++    +HG+ VI  
Sbjct: 375 VISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITG 434

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            C   FV ++L+D+YSKCG    A  +FE   +K VV+W+SMI G+  +G   +A+ LF 
Sbjct: 435 FCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQ 494

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKC 547
            M  + ++ + +TF++ + ACS+ G +++GK +   +   YGV  +    +A+ D+  + 
Sbjct: 495 MMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRA 554

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           G+LQ A ++       +  +W A++     H     +  +  ++L   + P+   + N+L
Sbjct: 555 GELQEAAKLLHGNGRADAHTWCALLAACRAHHDTEMSEVVAAKLLK--LDPDHAGYYNLL 612



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 230/452 (50%), Gaps = 8/452 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L ++C  L  L     LHA  + +   Y D   +  L+  YA+   +  S   ++ F EP
Sbjct: 105 LLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEP 164

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI-SNFIYPSVLRACSSLGDLGSGEKV 117
           D  +   ++  Y  N    E++  + + +  Q  + S     SV+ A + L D+ +G+  
Sbjct: 165 DMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQAC 224

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  +I+  F+ D V+  +IL  Y   G +  AR++F+ MT +DVV+WS ++  Y  + D+
Sbjct: 225 HAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDI 284

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E L  +  MV  G++P+ VT++S+ +AC     +   R +H   ++   +++  +  + 
Sbjct: 285 CEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATAL 344

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KC     A + F ++ K+   +W  +IS + ++G   +++  F  ML     P+ 
Sbjct: 345 VDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDA 404

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           +T++ VL +C+  G +R+   +H  ++  G   +  ++  AL++ Y++CG +    +V  
Sbjct: 405 VTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKI-FVAAALVDLYSKCGNLGCAVRVFE 463

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
           +  E++++ W+ +IS Y   G+ ++A+EL   M    + P+S +  S LSAC + G +Q 
Sbjct: 464 SAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQE 523

Query: 418 GLQIHGHVIKI--DCKDEFVQSSLIDMYSKCG 447
           G +I   + ++     +    S+++D+  + G
Sbjct: 524 GKRIFESMTQVYGVVPNAVHHSAMVDLLGRAG 555



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 234/481 (48%), Gaps = 9/481 (1%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L EA  +  +   A  +H H+LR           S ++     G    A   F +I    
Sbjct: 10  LLEAAADSSTPVAAARLHAHLLRSGHLHSSHHLTSHVLASYPTG---LARHLFDEIPVPT 66

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
                A++  + R+  +  AL   +  L V+  P+  TL  +L +CA L  L  G+++H 
Sbjct: 67  PRLANALLRAHVRARQWCDAL-LLIPCLRVR--PDAFTLSLLLKACAMLPALAHGRALHA 123

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             IR        ++  AL+  YA+C  M       +A  E +++    +++ Y +  M+ 
Sbjct: 124 LAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAA 183

Query: 382 EALELLVQ-MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSL 439
           EALE   + +   G MP   ++ S +SA   +  +  G   H  VI+ + + D  + +++
Sbjct: 184 EALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAI 243

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           +  Y + G    A  LFE + +K VV W+ M+ G+ Q+G+  EA+  + +M    ++ + 
Sbjct: 244 LGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNA 303

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           VT ++ +QACS    +E+G+ VH   +  G   ++ + TAL DMY KC   + A ++F  
Sbjct: 304 VTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCR 363

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
           MS+++ V+W+ +I  +  +G  +++  +FK ML  G  P+ VT + +L ACS SG + + 
Sbjct: 364 MSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQA 423

Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
                 + I G    +   A +VDL S+ G++  A ++  S     +  +W ++++G  +
Sbjct: 424 FCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFES-AMEKDVVLWSSMISGYGV 482

Query: 680 H 680
           H
Sbjct: 483 H 483


>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
          Length = 609

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 188/594 (31%), Positives = 317/594 (53%), Gaps = 6/594 (1%)

Query: 149 ARKVFDKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           A + F++ ++   V  W+S I    +     + L +F  M + G+EP+ +T  S+A+AC 
Sbjct: 6   ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           +L +L+ ++ +H HV++ + + D  +  S + MY KC  L  A   F ++  R   SW +
Sbjct: 66  KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNS 125

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  + + G+  + +  F +M       + +T+I +  S   L  L+  +S+H   I+ G
Sbjct: 126 MIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKGMSKEALE 385
           +  +   +    I  YA+CG+    E V   I  G +  +SWN +I+ YA      +A+ 
Sbjct: 186 IDTDVS-VSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVG 244

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYS 444
              +M   G   D  ++ S LS+C     L  G  IH H I++ C  +  V ++LI MYS
Sbjct: 245 FFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYS 304

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG    A  LF+ +  K+ V W +MI G  + G+  EA+ LF  M     + D VT ++
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIIS 364

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +  C   G LE GKW+     + G++ ++ +  AL D+YAKCG +  A+ +F +M E++
Sbjct: 365 LMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKS 424

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +VSW+ +I    ++G+  +A  LF QM++ G+KPN +TF+ +L AC+H+G +E+G   FN
Sbjct: 425 LVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFN 484

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            M +++ + P L HY+CM DLL R G ++ AF+ I +MPF  +  IW  LL+ C+IH+ +
Sbjct: 485 LMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNV 544

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
            + + +   L          Y  ++NIYA  G WD    +R++M+     K  G
Sbjct: 545 VIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSSG 598



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 163/522 (31%), Positives = 261/522 (50%), Gaps = 17/522 (3%)

Query: 72  WNNFFEESI---------LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           WN+   ES+         LL+ +M +     +N  +PSV +ACS L +L   + VH  ++
Sbjct: 22  WNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVV 81

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K  F  D  +QTS++  Y +   L  A  +F +M  RDV SW+S+I  +     V   + 
Sbjct: 82  KSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVVS 141

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M  EG+  D VT++ L  +   L  L+   SIH   ++  I  D  + N++I  Y+
Sbjct: 142 LFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYA 201

Query: 243 KCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           KCG+   AE  F  I+K  +   SW +MI+ Y       KA+  F KML      +L T+
Sbjct: 202 KCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTI 261

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L SC     L  GK +H   I+ G   +   +   LI  Y++CG +     +   + 
Sbjct: 262 LSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVIN-TLISMYSKCGDIGSARYLFDNML 320

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            +  +SW  +I+  A KG   EA+ L   M+  G  PD  ++ S +S CG  G+L+LG  
Sbjct: 321 GKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKW 380

Query: 421 IHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           I  +      KD   V ++LID+Y+KCG  + A  LF  + +KS+V W ++I G   NG 
Sbjct: 381 IDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGE 440

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYID 537
             EA+ LF QM    L+ + +TFL  +QAC++ G LEKG W    L++  Y +   +   
Sbjct: 441 FKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKG-WECFNLMTKVYKINPGLDHY 499

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
           + + D+  + G L+ A     +M  + +V  WS ++    +H
Sbjct: 500 SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIH 541



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 220/478 (46%), Gaps = 12/478 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL+    +H H++ +    D    T +++ Y +   L  +  +F      D   W  +I 
Sbjct: 69  NLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIX 128

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            +    F +  + L+ +M  E     +     +  +  SL DL   E +H   IK G D 
Sbjct: 129 GFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDT 188

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTS--RDVVSWSSIIASYFDNADVSEGLKMFHS 186
           D  +  + +  Y + G    A  VFD +    +  VSW+S+IA Y      S+ +  F  
Sbjct: 189 DVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKK 248

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+  G   D  T+LSL  +C +   L   + IH H ++     D  + N+ I MYSKCGD
Sbjct: 249 MLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGD 308

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           + SA   F  +  +   SWTAMI+     G   +A+  F  M  V E+P+L+T+I+++  
Sbjct: 309 IGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSG 368

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C   G L  GK +       G+      +  ALI+ YA+CG M    ++ + + E++++S
Sbjct: 369 CGQTGALELGKWIDTYATANGLKDNL-MVCNALIDVYAKCGSMDNARELFYTMPEKSLVS 427

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHG 423
           W  LI+  A  G  KEAL L  QM   GL P+  +  + L AC + G L+ G     +  
Sbjct: 428 WTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMT 487

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQN 477
            V KI+   D +  S + D+  + G    A+   + +  K  V +W+ ++  C  +QN
Sbjct: 488 KVYKINPGLDHY--SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQN 543



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 154/313 (49%), Gaps = 2/313 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE--PDSFMW 63
           S  +L+ L  +H+  +  G+  D   S   I +YA+ G    +  VFD   +       W
Sbjct: 167 SLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSW 226

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y       +++  + KM+            S+L +C     L  G+ +H   I+
Sbjct: 227 NSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQ 286

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
            G D D  +  +++  Y + G +  AR +FD M  +  VSW+++IA   +  D+ E + +
Sbjct: 287 VGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTL 346

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F +M   G +PD VT++SL   CG+  +L   + I  +     +K +  + N+ I +Y+K
Sbjct: 347 FSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAK 406

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG + +A   F  + ++   SWT +I+    +G F++AL  F +M+E+  +PN IT + V
Sbjct: 407 CGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAV 466

Query: 304 LGSCAGLGWLREG 316
           L +C   G+L +G
Sbjct: 467 LQACNHAGFLEKG 479


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 203/754 (26%), Positives = 378/754 (50%), Gaps = 27/754 (3%)

Query: 7   CTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           CT LR +    R+H H+  + +  +      L+  YA  G+   +R +FD     +   +
Sbjct: 73  CTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHNILSF 132

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG---DLGSGEKVHGR 120
             +++ Y+     +E++ + H + R +A  ++   P +  A  + G   DL  G   H  
Sbjct: 133 TAIMRAYVTAGDPDEALKILH-LARLKAFKAD--PPMLAMAVEAAGMKRDLSLGRFFHDT 189

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM----TSRDVVSWSSIIASYFDNAD 176
           I +CG+D D  +  S++  Y   G ++ A + FD+      S DVVSW+ I+A+  ++ D
Sbjct: 190 IRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRD 249

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
               L +F  M  +GV PD +  +++ ++   L  +   + IH  VL R+++ D  +G +
Sbjct: 250 YIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTA 309

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY++ G +  A R F +I++    +WT +I  Y R G F   ++   +M     +PN
Sbjct: 310 VVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPN 369

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECE 353
            +T IT+L +C  L  L +GK +   +  +      D    +G A+I  ++    M    
Sbjct: 370 EVTFITILDTCKNLA-LEDGKKIQA-LASEQQQRSLDASARIGTAVIGMFSRFSSMILAR 427

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           +    I ++++ ++  +I+ YA     +EAL +  +M    +  D+  +A ++SAC ++ 
Sbjct: 428 EAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIP 487

Query: 414 SLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
            L+ G  +H   + +   +D+ V+++L+DMYS+CG    A  +F  I++   + W++MI 
Sbjct: 488 DLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIA 547

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVR 531
              ++G+   A+ +  +M  +       T +  + AC++ G +E+  + VH  L+  G  
Sbjct: 548 ALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFD 607

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN---DAASLF 588
            D  +  A+  MYAK G +Q A   FD +   +V +W+ M++ Y   G+ N    A  L 
Sbjct: 608 SDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLA 667

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSR 647
           + M   G+ P++VTF++IL AC++ G ++E   YF  M+  +G+ P+++HY  +VD ++R
Sbjct: 668 RMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVAR 727

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
            G ++ A  +I  +P   N  IW ALL  C+     D  +T ++   +    +N    L 
Sbjct: 728 KGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQN--DAPRT-QRVGEIIMKINNKLDPLG 784

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +  +     W+E  +VR +M   G+KK PG S I
Sbjct: 785 TGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMI 818



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 165/597 (27%), Positives = 299/597 (50%), Gaps = 19/597 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  VL+ C+ L  +  G +VH  I +   + +  +   ++  Y  FG   +AR++FD + 
Sbjct: 66  YQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLG 125

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           S +++S+++I+ +Y    D  E LK+ H    +  + D   +    EA G    L   R 
Sbjct: 126 SHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRF 185

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA----ERTFVKIEKRCTTSWTAMISCYN 273
            H  + R    +D  +  S I MYS CG++ +A    +R F++       SWT +++  N
Sbjct: 186 FHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACN 245

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
               +  AL+ F +M E    P+ I  +TVL S  GLG + +GK +H  ++ + +  E D
Sbjct: 246 EHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDREL--ERD 303

Query: 334 -YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             +G A+++ YA  G + +  +    I +  + +W +LI  Y R G     +++L +M+ 
Sbjct: 304 SMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEA 363

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD----EFVQSSLIDMYSKCGF 448
            G+ P+  +  + L  C N+ +L+ G +I     +   +       + +++I M+S+   
Sbjct: 364 EGVKPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSS 422

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
             LA   F++I QKSV  + +MI G+  N    EA+ +F +M    +  D +    AI A
Sbjct: 423 MILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISA 482

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C++I  LE+GK +H   +  G+ +D  + TAL DMY++CG ++ A  VF  +   + ++W
Sbjct: 483 CASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAW 542

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
           SAMI   G HG    A ++  +M   G +P   T + +L AC+H+G +EE     +++ +
Sbjct: 543 SAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLV 602

Query: 629 ---FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHK 681
              F  +P+++ +A M  + ++ G I+ A      +  P +   W  +L   CR+ K
Sbjct: 603 DGGFDSDPEVK-FAVM-RMYAKVGSIQEACNAFDKIENP-DVKAWTTMLEAYCRLGK 656



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 176/380 (46%), Gaps = 12/380 (3%)

Query: 3   LFRSCTNL-----RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           +  +C NL     +K+  L +      L       T +I  ++   S+  +R  FD   +
Sbjct: 376 ILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQ 435

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
                +  +I  Y  N    E++ ++ +MIR +    N +    + AC+S+ DL  G+ +
Sbjct: 436 KSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKAL 495

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +  G  +DDV++T+++  Y   G ++DA  VF ++   D ++WS++IA+   + D 
Sbjct: 496 HCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDP 555

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL-RPARSIHGHVLRRKIKIDGPLGNS 236
              + M   M ++G  P   TM+ +  AC     +   AR +H  ++      D  +  +
Sbjct: 556 RGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFA 615

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ---KALESFVKMLEVKE 293
            + MY+K G +  A   F KIE     +WT M+  Y R G +    +AL+    M +   
Sbjct: 616 VMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGV 675

Query: 294 EPNLITLITVLGSCAGLGWLRE-GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            P+ +T + +L +CA  G L+E G+         G+ PE ++   AL++  A  G + E 
Sbjct: 676 MPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHY-VALVDTVARKGYLQEA 734

Query: 353 EKVIHAIG-ERNILSWNMLI 371
           E +I  +  + N + W  L+
Sbjct: 735 EDLIRMVPLQVNEIIWFALL 754



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 3/187 (1%)

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D  ++   +Q C+ +  + +G  VH  +    +  + ++   L  MYA  G+   A+R+F
Sbjct: 62  DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D +   N++S++A++  Y   G  ++A  +         K +       + A      + 
Sbjct: 122 DGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLS 181

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS---IWGALL 674
            G+F+ + +R  G + D      ++ + S  G+IE A +        A  S    W  +L
Sbjct: 182 LGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKIL 241

Query: 675 NGCRIHK 681
             C  H+
Sbjct: 242 AACNEHR 248


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 185/529 (34%), Positives = 287/529 (54%), Gaps = 46/529 (8%)

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  I++     W  M+  Y  S     AL+ +V M+ +   PN  T   +L SCA    
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS------ 366
             EG+ +H  +++ G  P+  Y+  +LI  YA+ G++ +  KV      R+++S      
Sbjct: 82  FEEGQQIHGHVLKLGYEPDL-YVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALIT 140

Query: 367 -------------------------WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
                                    WN +IS YA  G  KEALEL  +M    + PD  +
Sbjct: 141 GYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGT 200

Query: 402 VASSLSACGNVGSLQLGLQIHG----HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           + + LSAC    S++LG Q+H     H    + K   + ++LID+YSKCG    A  LFE
Sbjct: 201 MVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLK---IVNALIDLYSKCGQVETACGLFE 257

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +  K VV WN++I G+       EA+ LF +M  +    ++VT ++ + AC+++G ++ 
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317

Query: 518 GKWVH----HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
           G+W+H     KL    V     + T+L DMYAKCGD++ A +VF+SM  +++ SW+AMI 
Sbjct: 318 GRWIHVYIDKKLKD--VTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            + MHG+ N    LF +M  +GI+P+++TF+ +L ACSHSG ++ G+  F +M + + + 
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDIT 435

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P L+HY CM+DLL  SG  + A +MI +MP   +G IW +LL  CR H  +++ ++  + 
Sbjct: 436 PKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARN 495

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L      + G Y LLSNIYA  G WDE  KVR+++   G+KKVPG S+I
Sbjct: 496 LMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSI 544



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 239/481 (49%), Gaps = 39/481 (8%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A  VF  +   + + W++++  Y  ++D    LK++  M+  G+ P+  T   L ++C +
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK------------------------- 243
             +    + IHGHVL+   + D  +  S I MY++                         
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 244 ------CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
                  G++ SA+  F +I  +   SW AMIS Y  +G +++ALE F +M++    P+ 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T++TVL +CA    +  G+ VH  I   G G     +  ALI+ Y++CG++     +  
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVN-ALIDLYSKCGQVETACGLFE 257

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  ++++SWN LI  Y    + KEAL L  +M   G  P+  ++ S L AC ++G++ +
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317

Query: 418 GLQIHGHVIKIDCKD----EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           G  IH ++ K   KD      +++SLIDMY+KCG    A+ +F  +  KS+  WN+MI G
Sbjct: 318 GRWIHVYIDK-KLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRK 532
           F  +G +    +LF +M  N +E D++TF+  + ACS+ G+L+ G+ +   +   Y +  
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            +     + D+    G  + A+ +  +M  E + V W +++     HG L  A S  + +
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496

Query: 592 L 592
           +
Sbjct: 497 M 497



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 228/468 (48%), Gaps = 43/468 (9%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF T +EP+  +W  +++ Y  ++    ++ LY  MI      +++ +P +L++C+    
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR----------- 159
              G+++HG ++K G++ D  + TS++  Y + G L+DA KVFD+ + R           
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 160 --------------------DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
                               DVVSW+++I+ Y +     E L++F  M++  V PD  TM
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
           +++  AC +  S+   R +H  +       +  + N+ I +YSKCG + +A   F  +  
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           +   SW  +I  Y     +++AL  F +ML   E PN +T++++L +CA LG +  G+ +
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321

Query: 320 HCQIIRKGMG-PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           H  I +K         L  +LI+ YA+CG +    +V +++  +++ SWN +I  +A  G
Sbjct: 322 HVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 381

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS 438
            +    +L  +M+  G+ PD  +    LSAC + G L LG     H+ K   +D  +   
Sbjct: 382 RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGR----HIFKSMTQDYDITPK 437

Query: 439 L------IDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           L      ID+    G FK    ++     +   V+W S++    ++GN
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGN 485



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 200/424 (47%), Gaps = 36/424 (8%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H D  + T LI  YA  G++RS++ +FD     D   W  +I  Y     ++E++ L+ +
Sbjct: 129 HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M++           +VL AC+    +  G +VH  I   GF  +  I  +++  Y + G 
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           ++ A  +F+ ++ +DVVSW+++I  Y       E L +F  M+R G  P+ VT++S+  A
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308

Query: 206 CGELCSLRPARSIHGHVLRR-KIKIDGP-LGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           C  L ++   R IH ++ ++ K   + P L  S I MY+KCGD+ +A + F  +  +  +
Sbjct: 309 CAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS 368

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW AMI  +   G      + F +M +   EP+ IT + +L +C+  G L  G+      
Sbjct: 369 SWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRH----- 423

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I K M  +YD + P L E Y                          +I      G+ KEA
Sbjct: 424 IFKSMTQDYD-ITPKL-EHYG------------------------CMIDLLGHSGLFKEA 457

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
            E++   +T  + PD     S L AC   G+L+L      +++K++ ++      L ++Y
Sbjct: 458 KEMI---KTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIY 514

Query: 444 SKCG 447
           +  G
Sbjct: 515 ATAG 518



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 31/234 (13%)

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F  IQ+ + ++WN+M+ G+  + + + A+ L+  M    L  +  TF   +++C+ 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-------- 563
               E+G+ +H  ++  G   D+Y+ T+L  MYA+ G L+ A +VFD  S R        
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 564 -----------------------NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
                                  +VVSW+AMI  Y   G   +A  LFK+M+ + ++P+E
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            T + +L AC+ S SVE G+   + +   G   +L+    ++DL S+ G +E A
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 178/514 (34%), Positives = 293/514 (57%), Gaps = 5/514 (0%)

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           D  L N  IVMY KCG L  A   F ++ KR   SWTA++  + ++G   ++L  F KM 
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
               +PN  T  T L +C  L  L  G+ +H   ++ G     + +G ++I+ Y++CG++
Sbjct: 66  LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGF-DMVNVVGNSIIDMYSKCGRI 124

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
           +E   +   +  RN++SWN +I+ Y   G  ++AL L  +MQ  G   D F+  S+L AC
Sbjct: 125 NEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKAC 184

Query: 410 GNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
            ++G+++ G QIH  +I    +   +  V  +LID+Y KCG   +A  +F  I++K V+ 
Sbjct: 185 SDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVIS 244

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           W ++I G+ Q GN  E++ LF Q+  + +++D     + +   ++   +++GK +H   I
Sbjct: 245 WTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAI 304

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
                 DI +  ++ DMY KCG +  A+R+F  M  RNV+SW+ MI  YG HG   +A  
Sbjct: 305 KVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIR 364

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF-GVEPDLQHYACMVDLL 645
           LF +M     +P++VT++ +L  CSHSG VE+G+ YF+ +  + G++  ++HYACMVDLL
Sbjct: 365 LFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLL 424

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
            R+G ++ A  ++ SMP  AN  IW  LL+ CR+H  +++ K +   L    + +   Y 
Sbjct: 425 GRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYV 484

Query: 706 LLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++SNIYA+ G W E  ++R +++   LKK  G S
Sbjct: 485 MMSNIYADAGYWKECERIRELVKSKKLKKEAGRS 518



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 157/461 (34%), Positives = 248/461 (53%), Gaps = 4/461 (0%)

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF  D ++   ++  YG+ G L  A  VFD+M  R+VVSW++++  +  N +  E L +F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M   GV+P+  T  +  +ACG L  L   R IH   ++    +   +GNS I MYSKC
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G +  A   F  +  R   SW AMI+ Y  +G+ +KAL  F KM EV    +  T  + L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERN 363
            +C+ LG ++EG  +H  +I  G     +  +  ALI+ Y +CGK+    +V   I E++
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           ++SW  LI  YA++G   E++EL  Q++   +  D F ++S +    +   +Q G Q+H 
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301

Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
             IK+    D  V +S++DMY KCG  N A  LF  +  ++V+ W  MI G+ ++G   E
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY-GVRKDIYIDTALT 541
           AI LF +M L+  E D+VT+L  +  CS+ G +EKG+    +L SY G++  +     + 
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421

Query: 542 DMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
           D+  + G L+ A+ + DSM  E NV  W  ++    +HG L
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDL 462



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 248/535 (46%), Gaps = 36/535 (6%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           G  +D   S  LI  Y + G L  +  VFD   + +   W  L+  ++ N    ES+LL+
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
            KM       ++F + + L+AC  L  L  G ++H   +K GFD  +V+  SI+  Y + 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G +++A  +F+ M  R+++SW+++IA Y       + L +F  M   G   D  T  S  
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 204 EACGELCSLRPARSIHGHVLRRKI--KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           +AC +L +++    IH  ++       ++  +  + I +Y KCG L  A R F  IE++ 
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             SWTA+I  Y + G   +++E F ++ E   + +   L +++G  A    +++GK +H 
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             I+   G +   +  ++++ Y +CG ++E E++   +  RN++SW ++I+ Y + G+ K
Sbjct: 302 FAIKVPSGVDIS-VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLID 441
           EA+ L  +MQ     PD  +  + L  C + G ++ G +    +                
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRL---------------- 404

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
               C +  +         +  V  +  M+    + G   EA NL   M    LE +   
Sbjct: 405 ----CSYHGI---------KARVEHYACMVDLLGRAGRLKEAKNLVDSMP---LEANVGI 448

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
           + T + AC   G LE GK V   L+       +     ++++YA  G  +  +R+
Sbjct: 449 WQTLLSACRVHGDLELGKEVGGILLRLDSENPVNY-VMMSNIYADAGYWKECERI 502



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/438 (21%), Positives = 200/438 (45%), Gaps = 40/438 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   + TG          +I+ Y++ G +  +  +F+     +   W  +I  Y    
Sbjct: 94  QIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAG 153

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF--DKDDVI 132
           F E++++L+ KM      +  F + S L+ACS LG +  G ++H  +I  GF    +  +
Sbjct: 154 FCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAV 213

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +++  Y + G L  AR+VF  +  + V+SW+++I  Y    +++E +++F  +    +
Sbjct: 214 AGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSI 273

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           + D   + S+     +   ++  + +H   ++    +D  + NS + MY KCG +  AER
Sbjct: 274 QVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAER 333

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++  R   SWT MI+ Y + G  ++A+  F +M     EP+ +T + VL  C+  G 
Sbjct: 334 LFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGL 393

Query: 313 LREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNML 370
           + +G+    ++    G+    ++    +++     G++ E + ++ ++  E N+  W  L
Sbjct: 394 VEKGQEYFSRLCSYHGIKARVEHY-ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTL 452

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
                                              LSAC   G L+LG ++ G ++++D 
Sbjct: 453 -----------------------------------LSACRVHGDLELGKEVGGILLRLDS 477

Query: 431 KDEFVQSSLIDMYSKCGF 448
           ++      + ++Y+  G+
Sbjct: 478 ENPVNYVMMSNIYADAGY 495


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 189/561 (33%), Positives = 290/561 (51%), Gaps = 9/561 (1%)

Query: 181 LKMFHSMVREGVEPDF-VTMLS---LAEACGELCSLRPARSIHGHVLRRKIK-IDGPLGN 235
           LK  H  ++E  + D  VT  S   L EACG+L SL   R IH   LRR +K   G + N
Sbjct: 68  LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR-LRRTVKNPSGSIEN 126

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MY  CG  +  ++ F ++  +   SW  +IS Y ++G  +KA+  F  M      P
Sbjct: 127 CLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRP 186

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N    +++L SC G  +L  GK +H  +IR  +      +  A+   Y  CG +   + V
Sbjct: 187 NSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANIT-VETAICNMYVRCGWLEGAKLV 245

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              +  +N ++W  L+  Y +    + ALEL  +M   G+  D F  +  L  C  +   
Sbjct: 246 FDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDW 305

Query: 416 QLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
            +G QIH H++K+  + E  V + L+D Y KCG    AY  F RI + + V W+++I GF
Sbjct: 306 DMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI 534
            Q+G   + I +F  +    + ++   + +  QAC+    L  G   H   I  G+   +
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL 425

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
           Y ++A+  MY+KCG L  A+R F+S+ E + V+W+A+I  Y  HG   +A   F++M   
Sbjct: 426 YGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSY 485

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEG 653
           G++PN VTF+ +L ACSHSG V E K Y  +M R +GV+P + HY CM+D  SR+G +  
Sbjct: 486 GVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXE 545

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A ++I+ MPF  +   W +LL GC  H  + + K   + L      D   Y LL N+Y+ 
Sbjct: 546 ALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSA 605

Query: 714 EGNWDEFGKVRSIMEVTGLKK 734
            G W+E G VR +M    LKK
Sbjct: 606 FGKWEEAGHVRKLMAERELKK 626



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 261/534 (48%), Gaps = 14/534 (2%)

Query: 84  HKMIRE----QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCT 139
           H  ++E      +++   Y  +  AC  L  L  G  +H R+ +   +    I+  +L  
Sbjct: 72  HDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRM 131

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
           Y + G   D +KVFD+M  +++VSW  +I++Y  N ++ + +++F  M   G+ P+    
Sbjct: 132 YCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVY 191

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
           +SL ++C     L   + +H HV+R ++  +  +  +   MY +CG L  A+  F  ++ 
Sbjct: 192 MSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           +   +WT ++  Y ++   + ALE F +M     E +      VL  C  L     GK +
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQI 311

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
           H  I++ G   E   +G  L++FY +CG +    +    I E N +SW+ LIS +++ G 
Sbjct: 312 HSHIVKLGXESEVS-VGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGR 370

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSS 438
            ++ +++   +++ G++ +SF   S   AC    +L +G Q HG  IK       + +S+
Sbjct: 371 LEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESA 430

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           ++ MYSKCG  + A   FE I +   V W ++I G+  +GN+ EA+  F +M    +  +
Sbjct: 431 MVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPN 490

Query: 499 EVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
            VTF+  + ACS+ G + + K ++      YGV+  I     + D Y++ G L  A  + 
Sbjct: 491 AVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELI 550

Query: 558 DSMS-ERNVVSWSAMIDCYGMHGQLN----DAASLFKQMLDSGIKPNEVTFMNI 606
           + M  E + +SW +++     H  L      A +LF+  LD G     +   N+
Sbjct: 551 NRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFR--LDPGDTAGYILLFNL 602



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 237/499 (47%), Gaps = 19/499 (3%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           LF +C  LR L     +H  L  T  +        L+  Y + GS    + VFD     +
Sbjct: 93  LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKN 152

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W ++I  Y  N   E++I L+  M       ++ +Y S+L++C     L  G+++H 
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHS 212

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            +I+   + +  ++T+I   Y   G L+ A+ VFD M +++ V+W+ ++  Y     +  
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L++F  M  EGVE D      + + C  L      + IH H+++   + +  +G   + 
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVD 332

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            Y KCGD+ SA R+F +I +    SW+A+IS +++SG  +  ++ F  +       N   
Sbjct: 333 FYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFI 392

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
             +V  +CA    L  G   H   I++G+   Y Y   A++  Y++CG++    +   +I
Sbjct: 393 YTSVFQACAAQANLNMGSQAHGDAIKRGL-VSYLYGESAMVTMYSKCGRLDYARRAFESI 451

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E + ++W  +IS YA  G + EAL    +MQ++G+ P++ +  + L+AC + G +    
Sbjct: 452 DEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAK 511

Query: 420 QIHGHVIKIDCKDEFVQSS------LIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMIC 472
           Q  G +     +D  V+ +      +ID YS+ G    A  L  R+  +   + W S++ 
Sbjct: 512 QYLGSM----SRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLG 567

Query: 473 GFYQNGN----SLEAINLF 487
           G + + +     + A NLF
Sbjct: 568 GCWAHCDLKLGKIAAENLF 586



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 166/351 (47%), Gaps = 3/351 (0%)

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N+ +   +++G  KEA + L +M    +     S      ACG + SL  G  IH  + +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 428 -IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
            +      +++ L+ MY  CG       +F+ +  K++V W  +I  + +NG   +AI L
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F  M  + +  +   +++ +Q+C     LE GK +H  +I   +  +I ++TA+ +MY +
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVR 235

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG L+ A+ VFD M  +N V+W+ ++  Y    +L  A  LF +M   G++ +E  F  +
Sbjct: 236 CGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIV 295

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L  C      + GK   + +   G E ++     +VD   + GDIE A++    +  P N
Sbjct: 296 LKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEP-N 354

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY-YTLLSNIYAEEGN 716
              W AL++G     R++    I   L   G   N + YT +    A + N
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQAN 405


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 187/535 (34%), Positives = 289/535 (54%), Gaps = 12/535 (2%)

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-----EKRCTTSWTAMI 269
           A  IH  ++   +     L N+ + +Y+KCG   S ++T +       + +   SWT++I
Sbjct: 46  ATQIHSQLITTALLSLPFLFNNLLNLYAKCG---SVDQTLLLFSSAPDDSKNVVSWTSLI 102

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           +   R     KAL  F  M      PN  T   VL +C        G+ +H  + + G  
Sbjct: 103 TQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFL 162

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            E  ++  AL++ YA+C  M   EKV   +  RN++SWN +I  + +  +  +A+     
Sbjct: 163 AEV-FVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKT 221

Query: 390 MQTWGLMP-DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCG 447
           +    L   D  S +S  SAC N G+L+ G Q+HG  +K+   +  ++ +SL DMY KCG
Sbjct: 222 LLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCG 281

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
             N    LF     + VV WN MI  +  N N  +A N F  M       DE ++ + + 
Sbjct: 282 LFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLH 341

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
           +C+N+  L +G  +H+++I  G  K++ + ++L  MYAKCG L  A ++F+   +RNVV 
Sbjct: 342 SCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVC 401

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
           W+A+I     HG  N    LF+QML  GIKP+ +TF+++L ACSH+G VEEG FYFN+M 
Sbjct: 402 WTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMI 461

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
           ++ G+ P  +HYAC+VDLLSR+G+++ A + I  MP   + S+WGALL+ CR H  + + 
Sbjct: 462 KVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMG 521

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K +  +L     ++ G Y LL NI    G  +E  +VR  ME  G++K PG S I
Sbjct: 522 KEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWI 576



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 268/557 (48%), Gaps = 53/557 (9%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFD 173
           ++H ++I         +  ++L  Y + G +D    +F      S++VVSW+S+I     
Sbjct: 48  QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTR 107

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
                + L  F+ M R GV P+  T  ++  AC +  +     S+HG  +   +   G L
Sbjct: 108 FKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTA-----SVHGEQMHSLVWKHGFL 162

Query: 234 GNSFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF-VK 287
              F+V     MY+KC D+L AE+ F ++  R   SW  MI  + ++  + +A+  F   
Sbjct: 163 AEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTL 222

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           +LE     + ++  +V  +CA  G L  GK VH   ++ G+     Y+  +L + Y +CG
Sbjct: 223 LLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVW-NLVYINNSLSDMYGKCG 281

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
             ++  K+    G R++++WN++I  Y      ++A      M+  G +PD  S +S L 
Sbjct: 282 LFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLH 341

Query: 408 ACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           +C N+ +L  G  IH  +I+    K+  V SSLI MY+KCG    A+ +FE  + ++VV 
Sbjct: 342 SCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVC 401

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           W ++I    Q+G++   + LF QM    ++ D +TF++ + ACS+ G++E+G +  + +I
Sbjct: 402 WTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMI 461

Query: 527 S-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
             +G+         + D+ ++ G+L  A+R  + M                         
Sbjct: 462 KVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMP------------------------ 497

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ-HYACMVDL 644
                     IKP+   +  +L AC +  ++  GK    A+++F +EPD   +Y  + ++
Sbjct: 498 ----------IKPDASVWGALLSACRNHSNLIMGKEV--ALKLFDLEPDNPGNYVLLCNI 545

Query: 645 LSRSGDIEGAFKMIHSM 661
           L+R+G +  A ++   M
Sbjct: 546 LTRNGMLNEADEVRRKM 562



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 241/529 (45%), Gaps = 14/529 (2%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS----FMWAVLIKC 69
           T++H+ L+ T L   P     L+  YA+ GS+  + L+F +   PD       W  LI  
Sbjct: 47  TQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSS--APDDSKNVVSWTSLITQ 104

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
                   +++  ++ M R     +++ + +VL AC+       GE++H  + K GF  +
Sbjct: 105 LTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAE 164

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             + ++++  Y +   +  A KVF++M  R++VSW+++I  +  N    + +  F +++ 
Sbjct: 165 VFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLL 224

Query: 190 EGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           E +   D V+  S+  AC    +L   + +HG  L+  +     + NS   MY KCG   
Sbjct: 225 ENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFN 284

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
              + F     R   +W  MI  Y  +  ++ A  SF  M      P+  +  +VL SCA
Sbjct: 285 DVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCA 344

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L  L +G  +H QIIR G       +  +LI  YA+CG + +  ++     +RN++ W 
Sbjct: 345 NLAALYQGTLIHNQIIRSGFVKNL-RVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWT 403

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            +I+   + G +   +EL  QM   G+ PD  +  S LSAC + G ++ G      +IK+
Sbjct: 404 AIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKV 463

Query: 429 D--CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGNSLEAIN 485
                     + ++D+ S+ G  + A    E +  K    +W +++     + N +    
Sbjct: 464 HGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKE 523

Query: 486 LFHQMYLNCLEMDEV-TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           +  +++   LE D    ++      +  G L +   V  K+ S GVRK+
Sbjct: 524 VALKLF--DLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKE 570



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 141/281 (50%), Gaps = 8/281 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +F +C N   L    ++H   L  G+      +  L + Y + G       +F      D
Sbjct: 238 VFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARD 297

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W ++I  Y++N+ +E++   +  M R+ +      Y SVL +C++L  L  G  +H 
Sbjct: 298 VVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHN 357

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           +II+ GF K+  + +S++  Y + G L DA ++F++   R+VV W++IIA+   +   + 
Sbjct: 358 QIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANW 417

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            +++F  M+REG++PD++T +S+  AC     +         +++      G    + IV
Sbjct: 418 VVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIV 477

Query: 240 -MYSKCGDLLSAERTFVKIE--KRCTTSWTAMIS-CYNRSG 276
            + S+ G+L  A+R F+++   K   + W A++S C N S 
Sbjct: 478 DLLSRAGELDRAKR-FIELMPIKPDASVWGALLSACRNHSN 517


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 215/731 (29%), Positives = 358/731 (48%), Gaps = 41/731 (5%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
            H +    GL  D   +  L+  Y + G ++  R++F+     D  +W +++K Y+   F
Sbjct: 174 FHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGF 233

Query: 76  FEESILLYHKMIREQATISNFIYPS--VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            EE+I L        A  ++ ++P+   LR  S +    SG+      +K   + +D   
Sbjct: 234 KEEAIDL------SSAFHTSGLHPNEITLRLLSRI----SGDDSEAGQVKSFENGNDASA 283

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            S                        +++S + I++ Y      S  LK F  MV   +E
Sbjct: 284 VS------------------------EIISRNKILSGYLHAGQYSALLKCFMDMVESDLE 319

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D VT + +      L SL   + +H   L+  + +   + NS I MY K   +  A   
Sbjct: 320 CDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTV 379

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG-W 312
           F  + +R   SW ++I+   +S    +A+  F+++L    +P+  T+ +VL + + L   
Sbjct: 380 FNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEG 439

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L   K +H   I+     +  ++  ALI+ Y+    M E E V+      ++++WN ++S
Sbjct: 440 LSLSKQIHVHAIKTNNVAD-SFVSTALIDAYSRNRCMKEAE-VLFGRNNFDLVAWNAMMS 497

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
            Y +     + LEL   M   G   D F++A+ L  CG + ++  G Q+H + IK     
Sbjct: 498 GYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDL 557

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D +V S ++DMY KCG  + A   F+ I     V W ++I G  +NG    A+++F QM 
Sbjct: 558 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMR 617

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L  +  DE T  T  +A S +  LE+G+ +H   +      D ++ T+L DMYAKCG + 
Sbjct: 618 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSID 677

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A  +F  +   N+ +W+AM+     HG+  +A  LFKQM   GIKP++VTF+ +L ACS
Sbjct: 678 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACS 737

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           HSG V E   Y  +M R +G++P+++HY+C+ D L R+G ++ A  +I SM   A+ S++
Sbjct: 738 HSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMY 797

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL  CR+    +  K +  +L      D+  Y LLSN+YA    WDE    R++M+  
Sbjct: 798 RTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGH 857

Query: 731 GLKKVPGYSTI 741
            +KK PG+S I
Sbjct: 858 KVKKDPGFSWI 868



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 183/675 (27%), Positives = 319/675 (47%), Gaps = 50/675 (7%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN-- 74
           HA +L    + +      LI  Y++ GSL  +R VFD   E D   W  ++  Y  ++  
Sbjct: 69  HARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEG 128

Query: 75  ---FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
                +E+ LL+  + ++    S      +L+ C   G + + E  HG   K G D DD 
Sbjct: 129 VVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDF 188

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  +++  Y +FG + + R +F++M  RDVV W+ ++ +Y +     E + +  +    G
Sbjct: 189 VAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSG 248

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           + P+ +T+  L+   G+       +S                GN      S   +++S  
Sbjct: 249 LHPNEITLRLLSRISGDDSEAGQVKSFEN-------------GND----ASAVSEIISRN 291

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           +               ++S Y  +G +   L+ F+ M+E   E + +T I VL +   L 
Sbjct: 292 K---------------ILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLD 336

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L  G+ VHC  ++ G+      +  +LI  Y +  K+     V + + ER+++SWN +I
Sbjct: 337 SLALGQQVHCMALKLGLDLMLT-VSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVI 395

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS-LQLGLQIHGHVIKI-D 429
           +  A+  +  EA+ L +Q+   GL PD +++ S L A  ++   L L  QIH H IK  +
Sbjct: 396 AGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNN 455

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
             D FV ++LID YS+      A +LF R     +V WN+M+ G+ Q+ +  + + LF  
Sbjct: 456 VADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFAL 514

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M+      D+ T  T ++ C  +  + +GK VH   I  G   D+++ + + DMY KCGD
Sbjct: 515 MHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 574

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           +  AQ  FDS+   + V+W+ +I     +G+   A  +F QM   G+ P+E T   +  A
Sbjct: 575 MSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKA 634

Query: 610 CSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA---FKMIHSMPFPA 665
            S   ++E+G+  + NA+++     D      +VD+ ++ G I+ A   FK I  M    
Sbjct: 635 SSCLTALEQGRQIHANALKL-NCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM---- 689

Query: 666 NGSIWGALLNGCRIH 680
           N + W A+L G   H
Sbjct: 690 NITAWNAMLVGLAQH 704



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 249/533 (46%), Gaps = 38/533 (7%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H   L  GL      S  LI  Y ++  +  +R VF+   E D   W  +I     ++
Sbjct: 343 QVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSD 402

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGD-LGSGEKVHGRIIKCGFDKDDVIQ 133
              E++ L+ +++R      ++   SVL+A SSL + L   +++H   IK     D  + 
Sbjct: 403 LEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVS 462

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           T+++  Y    C+ +A  +F +  + D+V+W+++++ Y  + D  + L++F  M ++G  
Sbjct: 463 TALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGER 521

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            D  T+ ++ + CG L ++   + +H + ++    +D  + +  + MY KCGD+ +A+  
Sbjct: 522 SDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 581

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F  I      +WT +IS    +G  ++AL  F +M  +   P+  T+ T+  + + L  L
Sbjct: 582 FDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 641

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            +G+ +H   ++     +  ++G +L++ YA+CG + +   +   I   NI +WN ++  
Sbjct: 642 EQGRQIHANALKLNCTSD-PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 700

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
            A+ G  KEAL+L  QM++ G+ PD  +    LSAC + G +    +             
Sbjct: 701 LAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYK------------- 747

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           +++S    M+   G K              +  ++ +     + G   EA NL   M   
Sbjct: 748 YIRS----MHRDYGIK------------PEIEHYSCLADALGRAGLVKEAENLIDSM--- 788

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY-GVRKDIYIDTALTDMYA 545
            +E     + T + AC   G  E GK V  KL+    +    Y+   L++MYA
Sbjct: 789 SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV--LLSNMYA 839



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 144/586 (24%), Positives = 262/586 (44%), Gaps = 48/586 (8%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR   S  DL  G+  H RI+    + +  +  +++  Y + G L  AR+VFDKM  RD+
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 162 VSWSSIIASYFDNAD-----VSEGLKMFHSMVREGVEPDFVTMLSLAEAC---GELCSLR 213
           VSW+SI+A+Y  +++     V E   +F  + ++ V    +T+  + + C   G +C+  
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA-- 170

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
            + S HG+  +  +  D  +  + + +Y K G +      F ++  R    W  M+  Y 
Sbjct: 171 -SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYL 229

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
             G+ ++A++           PN ITL                     +++ +  G +  
Sbjct: 230 EMGFKEEAIDLSSAFHTSGLHPNEITL---------------------RLLSRISGDD-- 266

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
                     +E G++   E    A     I+S N ++S Y   G     L+  + M   
Sbjct: 267 ----------SEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVES 316

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
            L  D  +    L+    + SL LG Q+H   +K+       V +SLI+MY K     LA
Sbjct: 317 DLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLA 376

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F  + ++ ++ WNS+I G  Q+   +EA+ LF Q+    L+ D  T  + ++A S++
Sbjct: 377 RTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSL 436

Query: 513 GQ-LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
            + L   K +H   I      D ++ TAL D Y++   ++ A+ +F   +  ++V+W+AM
Sbjct: 437 PEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAM 495

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           +  Y      +    LF  M   G + ++ T   +L  C    ++ +GK         G 
Sbjct: 496 MSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGY 555

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           + DL   + ++D+  + GD+  A     S+P P + + W  L++GC
Sbjct: 556 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTLISGC 600



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 16/219 (7%)

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFK 449
           Q +G + D+ S +           L LG   H  ++ ++   E F+ ++LI MYSKCG  
Sbjct: 48  QCFGFLRDAISTSD----------LMLGKCTHARILALEENPERFLVNNLISMYSKCGSL 97

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNG-----NSLEAINLFHQMYLNCLEMDEVTFLT 504
             A  +F+++ ++ +V WNS++  + Q+      N  EA  LF  +  + +    +T   
Sbjct: 98  TYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSP 157

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            ++ C + G +   +  H      G+  D ++  AL ++Y K G ++  + +F+ M  R+
Sbjct: 158 MLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRD 217

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           VV W+ M+  Y   G   +A  L      SG+ PNE+T 
Sbjct: 218 VVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256


>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 606

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 192/530 (36%), Positives = 282/530 (53%), Gaps = 16/530 (3%)

Query: 225 RKIKIDGP--------LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           R I+ D P        L    I  Y   G    A   F ++  R   +WT+MI+ Y    
Sbjct: 27  RCIQNDTPFNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCN 86

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
              +A   F  ML    +PN  T+  VL +C  L  L  GK VH   I+ G      Y+ 
Sbjct: 87  HHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVD 146

Query: 337 PALIEFYAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM--QTW 393
            AL++ YA C   M     V   IG +N +SW  LI+ Y  +  +   L +  QM  +  
Sbjct: 147 NALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEG 206

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
            L P SFS+A  +SAC ++GS  LG Q+H  VI    +    V ++++DMY +C   + A
Sbjct: 207 ELSPFSFSIA--VSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEA 264

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             LF  + QK  + WN++I GF +  +S E++ +F QM       +  TF + I AC+N+
Sbjct: 265 KQLFGEMTQKDTITWNTLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANL 323

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L  G+ +H  +I  G+  ++ +  AL DMYAKCG++  + ++F  M   N+VSW++M+
Sbjct: 324 AILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMM 383

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             YG HG   +A  LF +M+ SGIKP+++ FM +L ACSH+G V+EG  YF  M   + V
Sbjct: 384 IGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNV 443

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
            PD   YAC+VDLLSR+G ++ A+++I +MPF  + SIW ALL  C+ +K+  + K    
Sbjct: 444 APDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAAL 503

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++     N  G Y LLSN  A EGNW +F  +R +M  T  KK  G S I
Sbjct: 504 KVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWI 553



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 233/443 (52%), Gaps = 12/443 (2%)

Query: 126 FDKDDV--IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
           F+  D+  + T ++ +Y + G  ++A  +FD+M  RDV++W+S+I  Y      S    +
Sbjct: 35  FNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNV 94

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNSFIVM 240
           F +M+R+GV+P+  T+ ++ +AC  L +L   + +HG  L  KI   G    + N+ + M
Sbjct: 95  FTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHG--LAIKIGTQGSSIYVDNALMDM 152

Query: 241 YSKCGDLLSAER-TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           Y+ C D +   R  F  I  +   SWT +I+ Y         L  F +M   + E +  +
Sbjct: 153 YATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFS 212

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
               + +CA +G    GK VH  +I  G       +  A+++ Y  C   SE +++   +
Sbjct: 213 FSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMN-AILDMYCRCRCASEAKQLFGEM 271

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            +++ ++WN LI+ +     S E+L +  QM + G  P+ F+  S ++AC N+  L  G 
Sbjct: 272 TQKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQ 330

Query: 420 QIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           Q+HG +I     +   + ++LIDMY+KCG    ++ +F  ++  ++V W SM+ G+  +G
Sbjct: 331 QLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHG 390

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYID 537
           +  EA++LF++M  + ++ D++ F+  + ACS+ G +++G      + S Y V  D  I 
Sbjct: 391 HGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIY 450

Query: 538 TALTDMYAKCGDLQTAQRVFDSM 560
             + D+ ++ G ++ A  + ++M
Sbjct: 451 ACVVDLLSRAGRVKEAYELIENM 473



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 6/435 (1%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           +T LI+SY + GS   +  +FD     D   W  +I  Y   N    +  ++  M+R+  
Sbjct: 44  TTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGV 103

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC--LDDA 149
             + F   +VL+AC SL  L  G+ VHG  IK G     +   + L       C  +D+A
Sbjct: 104 KPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNA 163

Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           R VF+ + +++ VSW+++I  Y    D   GL++F  M  E  E    +      AC  +
Sbjct: 164 RLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASI 223

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
            S    + +H  V+    + + P+ N+ + MY +C     A++ F ++ ++ T +W  +I
Sbjct: 224 GSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLI 283

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + +     ++ +L  F +M+     PN  T  +V+ +CA L  L  G+ +H  II +G+ 
Sbjct: 284 AGFETLDSYE-SLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLD 342

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
              + L  ALI+ YA+CG +++  K+   +   N++SW  ++  Y   G  KEA++L  +
Sbjct: 343 NNLE-LSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNE 401

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI--DCKDEFVQSSLIDMYSKCG 447
           M   G+ PD     + LSAC + G +  GL+    +        D  + + ++D+ S+ G
Sbjct: 402 MVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAG 461

Query: 448 FKNLAYLLFERIQQK 462
               AY L E +  K
Sbjct: 462 RVKEAYELIENMPFK 476



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C NL  L    +LH  ++  GL  +   S  LI+ YA+ G++  S  +F   +  +   
Sbjct: 319 ACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVS 378

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
           W  ++  Y  +   +E++ L+++M+         ++ +VL ACS  G +  G
Sbjct: 379 WTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEG 430


>gi|302793011|ref|XP_002978271.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
 gi|300154292|gb|EFJ20928.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
          Length = 680

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 202/685 (29%), Positives = 349/685 (50%), Gaps = 14/685 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFK-EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           L+  Y   GS+ S+R +FD+   E +   W V+I  Y+   +  E++LL+ K + E    
Sbjct: 1   LLGMYVRCGSVESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRP 60

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD--DVIQTSILCTYGEFGCLDDARK 151
           S   + ++L ACS    L  G+K+H  + + GF +     + TS++  YG+ G LD+A K
Sbjct: 61  SEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWK 120

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           V +K+ SRDV  W+ +IAS      +    ++   M  EG  P  +T +++  AC +   
Sbjct: 121 VMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPE 180

Query: 212 LRPARSI-HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
            R    + HG +  R ++ D  +G S + MY++ GD   A+  F +IE R  +SW  +++
Sbjct: 181 ARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLA 240

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y+R    ++AL  + +M+    +P+ +TL TV+  CA L  L +G  +H QI   G   
Sbjct: 241 AYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFAS 300

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +   L  ALI FY  CGK+    ++  A+  R+ ++WN +I+        + A+    +M
Sbjct: 301 DL-MLDTALITFYGRCGKLEAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRM 359

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFK 449
           Q  G+ P   ++ + L  CG+VG  +L   +H  V +    +D  V+++LI  Y +CG  
Sbjct: 360 QQEGMAPSRVTLLTVLGLCGSVGEAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGL 416

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             A  +FE + +K    WN+M+  +   G    A+ LFH+M +   +M + +  T I A 
Sbjct: 417 PQALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRM-VKLEQMIQPSVSTIILAL 475

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSW 568
           ++   L  GK V   +    V +D ++  A+ DM A+CG L  A   F  + + ++ V W
Sbjct: 476 NSCRSLADGKLVISSIPESLVEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVLW 535

Query: 569 SAMIDCYGMHGQLNDAASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAM 626
           + M+  +  HG    A  LF+ M LD G  P+EVT +++L ACSH+G +  G + + +  
Sbjct: 536 TTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQIFASTA 595

Query: 627 RIFGVE-PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
             FGV+   L+ Y C++DLL R+G ++ A  ++ S  F  +  +W  LL   ++    + 
Sbjct: 596 SDFGVQWRSLELYGCVIDLLGRAGQLQEAEMLVASSDFSGSSVLWITLLGASKVRGNEEA 655

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNI 710
            K    ++      +   + +LSN+
Sbjct: 656 GKRAAVKVLELDPGNAAAHVILSNL 680



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 281/572 (49%), Gaps = 20/572 (3%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYD--PPASTRLIESYAEMGSLRSSRLVFDTF 55
           + L  +C+   +L +  +LH  L   G      P  +T LI+ Y + GSL  +  V +  
Sbjct: 66  IALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKVMEKI 125

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS-G 114
           +  D  +W V+I         + +  L  +M  E    S   + +VLRAC    +    G
Sbjct: 126 ESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVG 185

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             +HG I + G + D  + TS++  Y  +G    A++VF ++ +RDV SW+ ++A+Y   
Sbjct: 186 GVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLAAYSRC 245

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           +   + L ++  M+ EGV+PD +T+ ++ + C  L  L     IH  +       D  L 
Sbjct: 246 SRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLD 305

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            + I  Y +CG L +A   F  +  R   +W  MI+  N     + A+  F +M +    
Sbjct: 306 TALITFYGRCGKLEAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMA 365

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ +TL+TVLG C  +G   E K VH  +   G   + + +   LI  Y  CG + +  +
Sbjct: 366 PSRVTLLTVLGLCGSVG---EAKLVHSCVRESGFEQDSE-VKNTLITAYGRCGGLPQALE 421

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM--PDSFSVASSLSACGNV 412
           +  A+  +   SWN ++  YA +G  + ALEL  +M     M  P   ++  +L++C ++
Sbjct: 422 IFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILALNSCRSL 481

Query: 413 GSLQLGL-QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSM 470
              +L +  I   +++   +D FVQ++++DM ++CG  + A   F ++ + K  V+W +M
Sbjct: 482 ADGKLVISSIPESLVE---EDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTM 538

Query: 471 ICGFYQNGNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-Y 528
           +  F ++G+S  A+ LF  M L+     DEVT ++ + ACS+ G L +G  +     S +
Sbjct: 539 VAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQIFASTASDF 598

Query: 529 GVR-KDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           GV+ + + +   + D+  + G LQ A+ +  S
Sbjct: 599 GVQWRSLELYGCVIDLLGRAGQLQEAEMLVAS 630



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 241/491 (49%), Gaps = 19/491 (3%)

Query: 1   MPLFRSCTNLRKLTR----LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           M + R+C +  +  +    LH  +   GL  D    T L+  YA  G  + ++ VF   +
Sbjct: 169 MAVLRACKDHPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIE 228

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
             D   W  L+  Y   +  E++++LY +M+ E          +V+  C+SL DL  G +
Sbjct: 229 ARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSR 288

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H +I   GF  D ++ T+++  YG  G L+ A ++F+ + +RD V+W+++IAS  D++ 
Sbjct: 289 IHQQIASSGFASDLMLDTALITFYGRCGKLEAALEIFEALPARDNVTWNTMIASLNDHSS 348

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
               +  F  M +EG+ P  VT+L++   CG   S+  A+ +H  V     + D  + N+
Sbjct: 349 PEAAMGFFQRMQQEGMAPSRVTLLTVLGLCG---SVGEAKLVHSCVRESGFEQDSEVKNT 405

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--E 294
            I  Y +CG L  A   F  + ++  +SW AM+  Y   G  + ALE F +M+++++  +
Sbjct: 406 LITAYGRCGGLPQALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQ 465

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P++ T+I  L SC  L    +GK V    I + +  E  ++  A+++  A CG + +  +
Sbjct: 466 PSVSTIILALNSCRSLA---DGKLV-ISSIPESLVEEDGFVQAAMVDMLARCGSLDDASE 521

Query: 355 VIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNV 412
             H +G+ ++ + W  +++ +AR G S  AL L   M    G  PD  ++ S LSAC + 
Sbjct: 522 FFHKLGKNKDTVLWTTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHA 581

Query: 413 GSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWN 468
           G L  GLQI         +  +   +   +ID+  + G    A +L        S V+W 
Sbjct: 582 GLLHRGLQIFASTASDFGVQWRSLELYGCVIDLLGRAGQLQEAEMLVASSDFSGSSVLWI 641

Query: 469 SMICGFYQNGN 479
           +++      GN
Sbjct: 642 TLLGASKVRGN 652


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 187/531 (35%), Positives = 297/531 (55%), Gaps = 44/531 (8%)

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A   F  I++    SW  MI  +  S     AL  +V M+ +   PN  T   +  SCA 
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 310 LGWLREGKSVHCQIIRKGMGPE----------YDYLG--------------------PAL 339
               +EGK +H QI++ G+  +          Y   G                     A+
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           I  YA  G M + +K+   I  ++++SWN +IS YA  G  KEALEL  +M    + PD 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 400 FSVASSLSACGNVGSLQLGLQIH----GHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
            ++A+ LS C + G+++LG QIH     H    + K   + ++LID+YSKCG    A+ L
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLK---LVNALIDLYSKCGEMERAHGL 267

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           FE +Q K V+ WN++I G+    +  EA+ +F +M       ++VT L+ + AC+++G +
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327

Query: 516 EKGKWVH----HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           + G+W+H     KL   G+  +  + T+L DMYAKCG+++ A +VFD++  +++ S +AM
Sbjct: 328 DIGRWIHVYIDKKL--KGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAM 385

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FG 630
           I  + MHG+ + A  L  +M   GI+P+++TF+ +L ACSH+G  + G+  F +M + + 
Sbjct: 386 IFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR 445

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           +EP L+HY CM+DLL RSG  + A ++I+SM    +G IWG+LL  C+IHK +++ + I 
Sbjct: 446 IEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIA 505

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++L      + G Y LLSNIYA    WD+  +VR+++   GLKKVPG S+I
Sbjct: 506 QKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSI 556



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 251/513 (48%), Gaps = 40/513 (7%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           IL  Y  F  L  A  VF  +   + +SW+++I  +  ++D    L ++  M+  G+ P+
Sbjct: 20  ILTPY--FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPN 77

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T   L ++C +  + +  + IH  +L+  + +D  +  S I MY++ G +  A + F 
Sbjct: 78  SYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFD 137

Query: 256 KIEKRCTTSWTAMISCYNRSG-------------------W------------FQKALES 284
               R   S+TAMI+ Y   G                   W            +++ALE 
Sbjct: 138 TSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALEL 197

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F +M+++  +P+  T+ TVL +C   G +  G+ +H  I   G G     +  ALI+ Y+
Sbjct: 198 FNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVN-ALIDLYS 256

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG+M     +   +  ++++SWN LI  YA     KEAL +  +M   G  P+  ++ S
Sbjct: 257 KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLS 316

Query: 405 SLSACGNVGSLQLGLQIHGHV---IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
            L AC ++G++ +G  IH ++   +K    +  +Q+SLIDMY+KCG    A  +F+ I  
Sbjct: 317 ILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILN 376

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           KS+   N+MI GF  +G +  A +L  +M  + +E D++TF+  + ACS+ G  + G+ +
Sbjct: 377 KSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436

Query: 522 HHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHG 579
              + + Y +   +     + D+  + G  + A+ + +SM+ E + V W +++    +H 
Sbjct: 437 FKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHK 496

Query: 580 QLNDAASLFKQMLDSGIK-PNEVTFMNILWACS 611
            L     + ++++    K P     ++ ++A S
Sbjct: 497 NLELGELIAQKLMKIEPKNPGSYVLLSNIYATS 529



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 232/465 (49%), Gaps = 39/465 (8%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF + +EP+   W  +I+ +  ++    ++ LY  MI    + +++ +P + ++C+    
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
              G+++H +I+K G   D  + TS++  Y + G ++DA KVFD  + RDVVS++++I  
Sbjct: 94  AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153

Query: 171 Y------------FD----------NADVS---------EGLKMFHSMVREGVEPDFVTM 199
           Y            FD          NA +S         E L++F+ M++  V+PD  TM
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
            ++   C    ++   R IH  +       +  L N+ I +YSKCG++  A   F  ++ 
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           +   SW  +I  Y      ++AL  F +ML++ E PN +T++++L +CA LG +  G+ +
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333

Query: 320 HCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           H  I +K  G   +  L  +LI+ YA+CG +    +V   I  +++ S N +I  +A  G
Sbjct: 334 HVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHG 393

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---KIDCKDEFV 435
            +  A +LL +M+  G+ PD  +    LSAC + G   LG +I   +    +I+ K E  
Sbjct: 394 RADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHY 453

Query: 436 QSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMI--CGFYQN 477
              +ID+  + G FK    L+     +   V+W S++  C  ++N
Sbjct: 454 -GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKN 497



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 193/424 (45%), Gaps = 36/424 (8%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
           T  H D  + T +I  YA  G++  ++ +FD     D   W  +I  Y     ++E++ L
Sbjct: 138 TSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALEL 197

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +++M++           +VL  C+  G++  G ++H  I   GF  +  +  +++  Y +
Sbjct: 198 FNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSK 257

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G ++ A  +F+ +  +DV+SW+++I  Y       E L +F  M++ G  P+ VTMLS+
Sbjct: 258 CGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSI 317

Query: 203 AEACGELCSLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
             AC  L ++   R IH ++ +  + I  +  L  S I MY+KCG++ +A + F  I  +
Sbjct: 318 LPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNK 377

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
             +S  AMI  +   G    A +   +M +   EP+ IT + +L +C+  G    G+   
Sbjct: 378 SLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRK-- 435

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
              I K M  +Y                            E  +  +  +I    R G+ 
Sbjct: 436 ---IFKSMTLDYRI--------------------------EPKLEHYGCMIDLLGRSGLF 466

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLI 440
           KEA EL+  M    + PD     S L AC    +L+LG  I   ++KI+ K+      L 
Sbjct: 467 KEAEELINSMT---MEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLS 523

Query: 441 DMYS 444
           ++Y+
Sbjct: 524 NIYA 527



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 34/262 (12%)

Query: 448 FKNLAYLL--FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           F  L Y +  F+ IQ+ + + WN+MI G   + + + A+NL+  M    L  +  TF   
Sbjct: 25  FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFL 84

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-- 563
            ++C+     ++GK +H +++ YG+  D+++ T+L  MYA+ G ++ A +VFD+ S R  
Sbjct: 85  FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144

Query: 564 -----------------------------NVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
                                        +VVSW+AMI  Y   G+  +A  LF +M+  
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
            +KP+E T   +L  C+HSG+VE G+   + +   G   +L+    ++DL S+ G++E A
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264

Query: 655 FKMIHSMPFPANGSIWGALLNG 676
             +   + +    S W  L+ G
Sbjct: 265 HGLFEGLQYKDVIS-WNTLIGG 285


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 186/537 (34%), Positives = 290/537 (54%), Gaps = 39/537 (7%)

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           S  GDL  A   F  I       W  MI   + S     ALE +V M+    EPN  T  
Sbjct: 73  SPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFP 132

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKM----------- 349
           ++  SC  +    EGK VH  +++ G+  E++ ++  +LI  YA+ G++           
Sbjct: 133 SIFKSCTKIRGAHEGKQVHAHVLKLGL--EHNAFVHTSLINMYAQNGELVNARLVFDKSS 190

Query: 350 --------------------SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
                                E  ++   I  R+++SWN +IS YA+ G  +EA+    +
Sbjct: 191 MRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEE 250

Query: 390 MQTWGLMPDSFSVASSLSACGNVGS-LQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCG 447
           M+   + P+  ++ S LSAC   GS LQLG  +   +          + + LIDMY KCG
Sbjct: 251 MRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCG 310

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  LFE+IQ K+VV WN MI G+       EA+ LF +M  + ++ ++VTFL+ + 
Sbjct: 311 DLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILP 370

Query: 508 ACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           AC+N+G L+ GKWVH  +      ++  + + T+L DMYAKCGDL  A+R+FD M+ +++
Sbjct: 371 ACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSL 430

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            +W+AMI  + MHG  + A  LF +M   G  P+++TF+ +L AC H+G +  G+ YF++
Sbjct: 431 ATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSS 490

Query: 626 M-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M + + V P L HY CM+DL  R+G  + A  ++ +M    +G+IW +LL  CRIH+RI+
Sbjct: 491 MIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIE 550

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +++ K L      +   Y LLSNIYA  G W++  K+R+ +    +KKVPG S+I
Sbjct: 551 LAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSI 607



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 253/514 (49%), Gaps = 48/514 (9%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEP 58
           + L  +C  L+ L ++H+ ++ TGLH    A ++LIE  + +  G L  +  +F T + P
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +  +W  +I+    +     ++  Y  MI      + + +PS+ ++C+ +     G++VH
Sbjct: 92  NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151

Query: 119 GRIIKCG---------------------------FDK----DDVIQTSILCTYGEFGCLD 147
             ++K G                           FDK    D V  T+++  Y   G LD
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLD 211

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           +AR++FD++  RDVVSW+++I+ Y  +  V E +  F  M R  V P+  TMLS+  AC 
Sbjct: 212 EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACA 271

Query: 208 EL-CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
           +   SL+    +   +  R +  +  L N  I MY KCGDL  A   F KI+ +   SW 
Sbjct: 272 QSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWN 331

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR- 325
            MI  Y     +++AL  F +M++   +PN +T +++L +CA LG L  GK VH  + + 
Sbjct: 332 VMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKN 391

Query: 326 -KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
            K M      L  +LI+ YA+CG ++  +++   +  +++ +WN +IS +A  G +  AL
Sbjct: 392 MKSMKNTV-ALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTAL 450

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSL----- 439
            L  +M + G +PD  +    L+AC + G L LG +    +I    +D  V   L     
Sbjct: 451 GLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMI----QDYKVSPKLPHYGC 506

Query: 440 -IDMYSKCGFKNLAYLLFERIQQKSV-VMWNSMI 471
            ID++ + G  + A  L + ++ K    +W S++
Sbjct: 507 MIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLL 540



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 148/307 (48%), Gaps = 36/307 (11%)

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLL--FERIQQ 461
           SL+   N  +LQ   QIH  +IK    +  F  S LI+  +     +L+Y L  F+ I+ 
Sbjct: 31  SLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN 90

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
            + V+WN MI G   + +   A+  +  M  +  E +E TF +  ++C+ I    +GK V
Sbjct: 91  PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE------------------- 562
           H  ++  G+  + ++ T+L +MYA+ G+L  A+ VFD  S                    
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210

Query: 563 ------------RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
                       R+VVSW+AMI  Y   G++ +A + F++M  + + PN  T +++L AC
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270

Query: 611 SHSG-SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           + SG S++ G +  + +   G+  +++    ++D+  + GD+E A  +   +    N   
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ-DKNVVS 329

Query: 670 WGALLNG 676
           W  ++ G
Sbjct: 330 WNVMIGG 336


>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 520

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 173/500 (34%), Positives = 295/500 (59%), Gaps = 7/500 (1%)

Query: 168 IASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           +A+Y  N   +E L++F  +++   ++PD  T  S+ +ACG L      R IH H+++  
Sbjct: 1   MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              D  + +S + +++KC     A + F ++ +R    W  +ISCY + G  +KALE F 
Sbjct: 61  FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           KM +   EPN +TL TV+ SCA L  L  GK +H ++++ GM  +  ++G AL++ Y + 
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLD-GFVGSALVDMYGKF 179

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G +   + +   + ++ +++WN LI+ Y+    SKE +EL  +M   G  P   +++S L
Sbjct: 180 GCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSIL 239

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
            AC     LQ G  IHG+ ++   + D FV S LI++Y KCG    A  +F  + + +VV
Sbjct: 240 LACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVV 299

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
           +WN MI G+   G+ ++A++++ +M +  ++ D VTF + + ACS +  LEKGK +H+ +
Sbjct: 300 LWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCI 359

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
               +  +  +  AL DMYAKCG +  A  VF+ + ER+++SW+++I  YG HGQ  +A 
Sbjct: 360 TKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEAL 419

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDL 644
            LF+++  S   P+ VTF+ +L ACSH+G V++G +YFN M   +G++P L+HY+C++DL
Sbjct: 420 RLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDL 479

Query: 645 LSRSGDIEGAFKMIHSMPFP 664
           L R   I+   + ++ +P P
Sbjct: 480 LGR---IQEQSQELNEIPCP 496



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 273/483 (56%), Gaps = 4/483 (0%)

Query: 67  IKCYMWNNFFEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           +  Y  N  + E++ L+ ++++       +F YPSVL+AC  LG    G  +H  +IK G
Sbjct: 1   MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           F  D V+ +S++  + +      A ++FD+M  RDV  W+++I+ Y+ +    + L+MF 
Sbjct: 61  FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M   G EP+ VT+ ++  +C  L  L   + IH  V++  + +DG +G++ + MY K G
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFG 180

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            L  A+  F ++ K+   +W ++I+ Y+ +   ++ +E F +M     +P + TL ++L 
Sbjct: 181 CLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILL 240

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           +C+    L+ G+ +H   +R  +  +  ++   LIE Y +CGK+   E + + + + N++
Sbjct: 241 ACSRAAHLQHGRFIHGYAVRNRVQLDI-FVSSGLIELYFKCGKVQSAENIFYMLPKANVV 299

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
            WN++IS Y   G   +AL++  +M+   + PD+ + +S LSAC  + +L+ G +IH  +
Sbjct: 300 LWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCI 359

Query: 426 IKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
            K D + +E V  +L+DMY+KCG  + A  +F ++ ++ ++ W S+I  +  +G +LEA+
Sbjct: 360 TKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEAL 419

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDM 543
            LF ++  +    D VTFL  + ACS+ G ++KG +  +++I+ YG++  +   + L D+
Sbjct: 420 RLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDL 479

Query: 544 YAK 546
             +
Sbjct: 480 LGR 482



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 221/411 (53%), Gaps = 1/411 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H HL+ +G  +D   ++ L+  +A+      +  +FD   E D   W  +I CY  +  
Sbjct: 52  IHTHLIKSGFVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGK 111

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            E+++ ++ KM       ++    +V+ +C+ L DL  G+++H  +++ G   D  + ++
Sbjct: 112 AEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSA 171

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  YG+FGCLD A+ +F++M  + +V+W+S+IA Y   AD  E +++F  M  EG +P 
Sbjct: 172 LVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPT 231

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ S+  AC     L+  R IHG+ +R ++++D  + +  I +Y KCG + SAE  F 
Sbjct: 232 VTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFY 291

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            + K     W  MIS Y   G + KAL+ + +M     +P+ +T  ++L +C+ L  L +
Sbjct: 292 MLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEK 351

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +H  I +  +      +G AL++ YA+CG + E   V + + ER++LSW  +IS Y 
Sbjct: 352 GKEIHNCITKNDLETNEIVMG-ALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYG 410

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
             G + EAL L  ++Q     PD+ +  + LSAC + G +  G      +I
Sbjct: 411 SHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMI 461



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 4/332 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  SC  L  L R   +H  ++  G+  D    + L++ Y + G L  ++ +F+   +  
Sbjct: 137 VISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMPKKT 196

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  Y      +E I L+ +M  E    +     S+L ACS    L  G  +HG
Sbjct: 197 LVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHG 256

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             ++     D  + + ++  Y + G +  A  +F  +   +VV W+ +I+ Y    D  +
Sbjct: 257 YAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVK 316

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L M+  M    V+PD VT  S+  AC +L +L   + IH  + +  ++ +  +  + + 
Sbjct: 317 ALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLD 376

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+KCG +  A   F K+ +R   SWT++IS Y   G   +AL  F ++ + K  P+ +T
Sbjct: 377 MYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVT 436

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGP 330
            + VL +C+  G + +G     Q+I   G+ P
Sbjct: 437 FLAVLSACSHAGLVDKGYYYFNQMITNYGIKP 468


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 179/521 (34%), Positives = 282/521 (54%), Gaps = 34/521 (6%)

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKA 281
           V+   ++ID  L    +  YS  G+   A   F +  ++    +  MI  Y  +  + +A
Sbjct: 62  VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
           L  F  ML     P+  T   VL +C+GL  LR G  VH  I++ G+     ++G AL+ 
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNL-FIGNALVA 180

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            Y +CG + E  KV+  +  R+++SWN +++ YA+ G   +ALE+  +M +  L  D+ +
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           +AS LS      SL+    IH                                +FER+ +
Sbjct: 241 MAS-LSPVVCYTSLENVQYIHN-------------------------------MFERMTK 268

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K+++ WN MI  +  N    EA++LF QM    ++ D VT  + + AC ++  L  G+ +
Sbjct: 269 KNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL 328

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  +    ++ ++ ++ AL DMYAKCG L+ A+ VFD M  R+VVSW++M+  YG  GQ 
Sbjct: 329 HKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQG 388

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYAC 640
            DA +LF +MLDSG  P+ + F+++L ACSH+G +++G+ YF  M   +G+ P ++H+AC
Sbjct: 389 YDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFAC 448

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDL  R+G++E A+  I  MP   N  +WGALL+ CR+H ++D+       L       
Sbjct: 449 MVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQ 508

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +GYY LLSNIYA+ G W +   VR  M+  G+KKVPG S +
Sbjct: 509 SGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNV 549



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 215/455 (47%), Gaps = 75/455 (16%)

Query: 10  LRKLTRLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           ++ L +LH+ +++   L  DP  + +L+ +Y+  G    +R +FD   E +   + V+I+
Sbjct: 51  IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD- 127
            Y+ NN + E++ ++  M+       ++ +P VL+ACS L +L  G +VH  I+K G D 
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDT 170

Query: 128 ------------------------------KDDVIQTSILCTYGEFGCLDDARKV----- 152
                                         +D V   S++  Y + G  DDA ++     
Sbjct: 171 NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 153 --------------------------------FDKMTSRDVVSWSSIIASYFDNADVSEG 180
                                           F++MT ++++SW+ +IA Y +N+  +E 
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEA 290

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           + +F  M   G++PD VT+ SL  ACG+L +L   R +H ++ +  ++ +  L N+ + M
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDM 350

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L  A   F K+  R   SWT+M+S Y RSG    A+  F KML+  + P+ I  
Sbjct: 351 YAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAF 410

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++VL +C+  G L +G+     +  + G+ P  ++    +++ +   G++ E    I  +
Sbjct: 411 VSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA-CMVDLFGRAGEVEEAYSFIKQM 469

Query: 360 G-ERNILSWNMLISE---YARKGMSKEALELLVQM 390
             E N   W  L+S    +++  +   A +LL Q+
Sbjct: 470 PMEPNERVWGALLSACRVHSKMDIGLVAADLLFQL 504


>gi|302794444|ref|XP_002978986.1| hypothetical protein SELMODRAFT_109727 [Selaginella moellendorffii]
 gi|300153304|gb|EFJ19943.1| hypothetical protein SELMODRAFT_109727 [Selaginella moellendorffii]
          Length = 670

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 209/677 (30%), Positives = 330/677 (48%), Gaps = 44/677 (6%)

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I     N  F E+I     MI+ +  T     +  +L +C     L  G K+HG I
Sbjct: 9   WNAIIAANAQNGCFTEAIEALESMIQLKSVTPDRMSFSVLLDSCCGSEHLAHGVKIHGLI 68

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
             C  D D  +  +++  YG  G ++ A+KVF  M  RD+VSW+++IA+   N      +
Sbjct: 69  FLCAIDSDLFLDNALITMYGRCGSVERAQKVFAAMEERDLVSWTAMIAANAANGHFLASV 128

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHV---LRRKIKIDGPLGNSFI 238
            ++  M++EGV PD +T  +L   C +  ++ P R IH H+     R +  D  LG+  +
Sbjct: 129 LLYLRMIQEGVLPDRITYATLLAGCLKQRAIDPGRMIHAHIESFYGRNMDRDNVLGSHLV 188

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            +Y +CG L  A+  F ++     + W+AMI+ Y +SG+  +ALE F +M      P+ +
Sbjct: 189 NLYRRCGSLEEAKSVFDRLGDPDASCWSAMIASYAQSGYGSQALELFQRMDRRGIVPDRL 248

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
             +++L  C+ +     G+  H +I   GM  E + +  ALI+ Y   G + E + V   
Sbjct: 249 AFLSILSVCSSIDL---GRRFHSRI--AGMDRE-NSIATALIQMYGRLGFVEESKGVFDR 302

Query: 359 I-------GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
           +        +R++  W  LI  YAR    +EALE+   M      PD+ S AS++ AC +
Sbjct: 303 LEKEQGDGDDRDVAVWTSLIQAYARNNRPREALEIFAAMMDHRCEPDAASFASAMDACSS 362

Query: 412 VGSLQLGLQIHGHVIKIDCKDE-----FVQSSLIDMYSKCGFKNLAYLLFER-IQQKSVV 465
           +G L L  +IH  +I +             ++ I MY KC     A   F+R I  K+ V
Sbjct: 363 LGDLTLARKIHAQIISLSSNPREEIQILATNAAIAMYGKCKSLEEAKTAFDRAIHAKNTV 422

Query: 466 ---MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
               WN+MI  + QNG+    + L+ QM    ++ D  T + A+ A + I + E G+ V 
Sbjct: 423 NTATWNAMIGAYAQNGHPGAGLELYQQMKSQGIQPDRATLVIALDAAAMIEEFELGRDV- 481

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
             LI   +  D  + TA+  M A+ G    A+RVFDS+  R+ + WSAM+  Y  +G   
Sbjct: 482 --LIDGALEYDERVATAVIGMLARSGKTIRAKRVFDSIPRRDGICWSAMVTAYAQNGHSI 539

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACM 641
            A  LF +M+  G   ++   ++IL ACS SG    G+ YF +M+  F V+P  +HYAC+
Sbjct: 540 LALELFSEMVVEGFVADKAAIVSILAACSQSGDFRRGRSYFASMQADFSVDPIAEHYACV 599

Query: 642 VDLLSRSGDIEGAFKMIHSMPFP-----ANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           VDL SR G I  A ++   MPF      A   + G    G R  +  D+  +++      
Sbjct: 600 VDLFSRIGWIREAQELAREMPFKADRAAAMALLAGGRTGGVRSFRGDDLGASLDCAAP-- 657

Query: 697 GTNDNGYYTLLSNIYAE 713
                  Y LLSNIY +
Sbjct: 658 -------YVLLSNIYKQ 667



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 272/539 (50%), Gaps = 26/539 (4%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRP 214
           M  R++ SW++IIA+   N   +E ++   SM++ + V PD ++   L ++C     L  
Sbjct: 1   MGLRNLASWNAIIAANAQNGCFTEAIEALESMIQLKSVTPDRMSFSVLLDSCCGSEHLAH 60

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
              IHG +    I  D  L N+ I MY +CG +  A++ F  +E+R   SWTAMI+    
Sbjct: 61  GVKIHGLIFLCAIDSDLFLDNALITMYGRCGSVERAQKVFAAMEERDLVSWTAMIAANAA 120

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYD 333
           +G F  ++  +++M++    P+ IT  T+L  C     +  G+ +H  I    G   + D
Sbjct: 121 NGHFLASVLLYLRMIQEGVLPDRITYATLLAGCLKQRAIDPGRMIHAHIESFYGRNMDRD 180

Query: 334 -YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
             LG  L+  Y  CG + E + V   +G+ +   W+ +I+ YA+ G   +ALEL  +M  
Sbjct: 181 NVLGSHLVNLYRRCGSLEEAKSVFDRLGDPDASCWSAMIASYAQSGYGSQALELFQRMDR 240

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLA 452
            G++PD  +  S LS C    S+ LG + H  +  +D ++  + ++LI MY + GF   +
Sbjct: 241 RGIVPDRLAFLSILSVC---SSIDLGRRFHSRIAGMD-RENSIATALIQMYGRLGFVEES 296

Query: 453 YLLFERIQQ-------KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
             +F+R+++       + V +W S+I  + +N    EA+ +F  M  +  E D  +F +A
Sbjct: 297 KGVFDRLEKEQGDGDDRDVAVWTSLIQAYARNNRPREALEIFAAMMDHRCEPDAASFASA 356

Query: 506 IQACSNIGQLEKGKWVHHKLISYGV--RKDIYI--DTALTDMYAKCGDLQTAQRVFD--- 558
           + ACS++G L   + +H ++IS     R++I I    A   MY KC  L+ A+  FD   
Sbjct: 357 MDACSSLGDLTLARKIHAQIISLSSNPREEIQILATNAAIAMYGKCKSLEEAKTAFDRAI 416

Query: 559 -SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
            + +  N  +W+AMI  Y  +G       L++QM   GI+P+  T +  L A +    +E
Sbjct: 417 HAKNTVNTATWNAMIGAYAQNGHPGAGLELYQQMKSQGIQPDRATLVIALDAAAM---IE 473

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           E +   + +    +E D +    ++ +L+RSG    A ++  S+P   +G  W A++  
Sbjct: 474 EFELGRDVLIDGALEYDERVATAVIGMLARSGKTIRAKRVFDSIP-RRDGICWSAMVTA 531



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 274/589 (46%), Gaps = 48/589 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  SC     L    ++H  + +  +  D      LI  Y   GS+  ++ VF   +E D
Sbjct: 48  LLDSCCGSEHLAHGVKIHGLIFLCAIDSDLFLDNALITMYGRCGSVERAQKVFAAMEERD 107

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I     N  F  S+LLY +MI+E        Y ++L  C     +  G  +H 
Sbjct: 108 LVSWTAMIAANAANGHFLASVLLYLRMIQEGVLPDRITYATLLAGCLKQRAIDPGRMIHA 167

Query: 120 RIIKC---GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
            I        D+D+V+ + ++  Y   G L++A+ VFD++   D   WS++IASY  +  
Sbjct: 168 HIESFYGRNMDRDNVLGSHLVNLYRRCGSLEEAKSVFDRLGDPDASCWSAMIASYAQSGY 227

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            S+ L++F  M R G+ PD +  LS+   C    S+   R  H  +    +  +  +  +
Sbjct: 228 GSQALELFQRMDRRGIVPDRLAFLSILSVCS---SIDLGRRFHSRIA--GMDRENSIATA 282

Query: 237 FIVMYSKCGDLLSAERTFVKIEK-------RCTTSWTAMISCYNRSGWFQKALESFVKML 289
            I MY + G +  ++  F ++EK       R    WT++I  Y R+   ++ALE F  M+
Sbjct: 283 LIQMYGRLGFVEESKGVFDRLEKEQGDGDDRDVAVWTSLIQAYARNNRPREALEIFAAMM 342

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP--EYDYLGP-ALIEFYAEC 346
           + + EP+  +  + + +C+ LG L   + +H QII     P  E   L   A I  Y +C
Sbjct: 343 DHRCEPDAASFASAMDACSSLGDLTLARKIHAQIISLSSNPREEIQILATNAAIAMYGKC 402

Query: 347 GKMSEC----EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
             + E     ++ IHA    N  +WN +I  YA+ G     LEL  QM++ G+ PD  ++
Sbjct: 403 KSLEEAKTAFDRAIHAKNTVNTATWNAMIGAYAQNGHPGAGLELYQQMKSQGIQPDRATL 462

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCK---DEFVQSSLIDMYSKCGFKNLAYLLFERI 459
             +L A   +   +LG       + ID     DE V +++I M ++ G    A  +F+ I
Sbjct: 463 VIALDAAAMIEEFELGRD-----VLIDGALEYDERVATAVIGMLARSGKTIRAKRVFDSI 517

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
            ++  + W++M+  + QNG+S+ A+ LF +M +     D+   ++ + ACS  G   +G+
Sbjct: 518 PRRDGICWSAMVTAYAQNGHSILALELFSEMVVEGFVADKAAIVSILAACSQSGDFRRGR 577

Query: 520 WVHHKLISY--GVRKDIYID------TALTDMYAKCGDLQTAQRVFDSM 560
                  SY   ++ D  +D        + D++++ G ++ AQ +   M
Sbjct: 578 -------SYFASMQADFSVDPIAEHYACVVDLFSRIGWIREAQELAREM 619


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/602 (30%), Positives = 315/602 (52%), Gaps = 12/602 (1%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSL 202
           G L DA  +FD+M  ++VV+W++ I+    N        MF  M+  GV   DF    +L
Sbjct: 56  GRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAAL 115

Query: 203 AEACGELCSLRP-ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           A               +H   +R     D  +G+  I +YS+CG + +AE  F ++E   
Sbjct: 116 AACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPD 175

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
              +T+++S   R+G   +A+E   +M+    +PN  T+ ++L  C  +     G+ +H 
Sbjct: 176 VVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHG 231

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            ++ K MG +  Y   ALI+FY+  G     E V   +  +N++SW  ++    R G  +
Sbjct: 232 YML-KVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLE 290

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLI 440
           +AL +  +M +  + P+ F+ + +L ACG+V    LG QIH   IK +   D  V ++L+
Sbjct: 291 DALRVFSEMISEAVEPNEFAFSIALGACGSVC---LGRQIHCSAIKCNLMTDIRVSNALL 347

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            MY + GF +    +  +I+   +V W + I   +QNG S +A+ L  QM+      ++ 
Sbjct: 348 SMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 407

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            F + + +C+++  L++G+ +H   +  G    +    AL +MY+KCG + +A+  FD M
Sbjct: 408 AFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVM 467

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           +  +V+SW+++I     HG  N     F +M  SG +P++ TF+ +L  C+H+G V+EG+
Sbjct: 468 NLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGE 527

Query: 621 FYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            +F  M   +G+ P   HYACM+D+L R+G  + A  MI +MPF  +  IW  LL  C++
Sbjct: 528 TFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKL 587

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           HK +D+ K    +L      D+  Y L+SN+YA    W +  +VR  M+  G+KK  G+S
Sbjct: 588 HKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWS 647

Query: 740 TI 741
            I
Sbjct: 648 WI 649



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 156/614 (25%), Positives = 282/614 (45%), Gaps = 51/614 (8%)

Query: 29  PPASTRL----IESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYH 84
           PP    L    +++  + G L  +  +FD     +   W   I     N   E +  ++ 
Sbjct: 38  PPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFA 97

Query: 85  KMIREQATISNFIYPSVLRACSSLGDLGS--GEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
            M+      ++F   + L AC++ G      GE+VH   ++ GF  D  I + ++  Y  
Sbjct: 98  DMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSR 157

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
            G +  A +VF +M + DVV ++S++++   N D++  +++   M+R+G++P+  TM S+
Sbjct: 158 CGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSM 217

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
              C  +        IHG++L+           + I  YS+ GD   AE  F  ++ +  
Sbjct: 218 LAECPRMI----GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNV 273

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            SW +M+    R G  + AL  F +M+    EPN       LG+C   G +  G+ +HC 
Sbjct: 274 VSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSVCLGRQIHCS 330

Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
            I+  +  +   +  AL+  Y   G +SE E V+  I   +++SW   IS   + G S++
Sbjct: 331 AIKCNLMTDI-RVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEK 389

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLID 441
           A+ LL+QM + G  P+ ++ +S LS+C ++  L  G Q+H   +K+ C  +    ++LI+
Sbjct: 390 AVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALIN 449

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MYSKCG    A L F+ +    V+ WNS+I G  Q+G +   +  F +M  +  + D+ T
Sbjct: 450 MYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDST 509

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           F+  +  C++ G +++G+     +   YG+         + DM  + G    A  +  +M
Sbjct: 510 FIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNM 569

Query: 561 -----------------------------------SERNVVSWSAMIDCYGMHGQLNDAA 585
                                              SER+  S+  M + Y MH +  DA 
Sbjct: 570 PFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAE 629

Query: 586 SLFKQMLDSGIKPN 599
            + ++M + G+K +
Sbjct: 630 RVRRRMDEIGVKKD 643



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 6/360 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H ++L         AST LI+ Y+  G    +  VF+     +   W  +++  + + 
Sbjct: 228 QIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDG 287

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E+++ ++ +MI E    + F +   L AC   G +  G ++H   IKC    D  +  
Sbjct: 288 RLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSVCLGRQIHCSAIKCNLMTDIRVSN 344

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           ++L  YG  G + +   V  K+ + D+VSW++ I++ F N    + + +   M  EG  P
Sbjct: 345 ALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTP 404

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +     S   +C +L  L   R +H   L+         GN+ I MYSKCG + SA   F
Sbjct: 405 NDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAF 464

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +      SW ++I    + G     LE+F +M     +P+  T I VL  C   G ++
Sbjct: 465 DVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVK 524

Query: 315 EGKS-VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLIS 372
           EG++       R G+ P   +    +I+     G+  E   +I  +  E ++L W  L++
Sbjct: 525 EGETFFRLMTDRYGLTPTPSHYA-CMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLA 583


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/606 (30%), Positives = 315/606 (51%), Gaps = 24/606 (3%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           IL  Y   G L  A+ +F     R+  +W+ ++ ++      S+ L +F +M+ EGV PD
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 353

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT+ ++    G  C++    S+H   ++  +     + N+ +  Y K G L +A R F+
Sbjct: 354 RVTVTTVLNLPG--CTVP---SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 408

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           ++  +   ++ AM+   ++ G   +AL+ F  M       + + L+    S         
Sbjct: 409 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHS--------- 459

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
            +S    ++         ++  +L++FY++C  + +  ++   + ER+ +S+N++I+ YA
Sbjct: 460 -RSRSTSVLNV-------FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA 511

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEF 434
               +   L L  +MQ  G        A+ LS  G++  + +G QIH  ++ +    ++ 
Sbjct: 512 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 571

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
           + ++LIDMYSKCG  + A   F    +KS + W ++I G+ QNG   EA+ LF  M    
Sbjct: 572 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 631

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           L  D  TF + I+A S++  +  G+ +H  LI  G +  ++  + L DMYAKCG L  A 
Sbjct: 632 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 691

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           R FD M ERN +SW+A+I  Y  +G+  +A  +F+ ML  G  P+ VTF+++L ACSH+G
Sbjct: 692 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 751

Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
             +E   YF+ M+  + + P  +HYAC++D L R G      KM+  MPF A+  IW ++
Sbjct: 752 LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSI 811

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CRIH   ++ +    +L      D   Y +LSNIYA  G W++   V+ IM   G++
Sbjct: 812 LHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 871

Query: 734 KVPGYS 739
           K  GYS
Sbjct: 872 KESGYS 877



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 151/624 (24%), Positives = 279/624 (44%), Gaps = 63/624 (10%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++ +Y+  G L +++ +F +    ++  W ++++ +       +++ L+  M+ E     
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 353

Query: 95  NFIYPSVLR--ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
                +VL    C+          +H   IK G D    +  ++L  Y + G L  AR+V
Sbjct: 354 RVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 406

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F +M  +D V++++++         ++ L++F +M R G     + +L  +         
Sbjct: 407 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSH-------- 458

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
             +RS    VL   +       NS +  YSKC  L    R F ++ +R   S+  +I+ Y
Sbjct: 459 --SRSRSTSVLNVFVN------NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 510

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
             +      L  F +M ++  +  ++   T+L     L  +  GK +H Q++  G+  E 
Sbjct: 511 AWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASE- 569

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
           D LG ALI+ Y++CG +   +       E++ +SW  LI+ Y + G  +EAL+L   M+ 
Sbjct: 570 DLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR 629

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNL 451
            GL PD  + +S + A  ++  + LG Q+H ++I+   K   F  S L+DMY+KCG  + 
Sbjct: 630 AGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDE 689

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A   F+ + +++ + WN++I  +   G +  AI +F  M       D VTFL+ + ACS+
Sbjct: 690 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 749

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
            G                          L D   K   L   Q       E     ++ +
Sbjct: 750 NG--------------------------LADECMKYFHLMKHQYSISPWKEH----YACV 779

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           ID  G  G  +    +  +M     K + + + +IL +C   G+ E  +    A ++FG+
Sbjct: 780 IDTLGRVGCFSQVQKMLVEM---PFKADPIIWTSILHSCRIHGNQELAR--VAADKLFGM 834

Query: 632 EP-DLQHYACMVDLLSRSGDIEGA 654
           EP D   Y  + ++ +R+G  E A
Sbjct: 835 EPTDATPYVILSNIYARAGQWEDA 858



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 232/508 (45%), Gaps = 33/508 (6%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+++Y + G L ++R VF    + D+  +  ++          +++ L+  M        
Sbjct: 390 LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM-------- 441

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
                   RA  S   L   +  H R        +  +  S+L  Y +  CLDD R++FD
Sbjct: 442 -------RRAGYSRHPLHLLQYSHSRSRSTSV-LNVFVNNSLLDFYSKCDCLDDMRRLFD 493

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEACGELCS 211
           +M  RD VS++ IIA+Y  N   +  L++F  M + G +     + TMLS+A   G L  
Sbjct: 494 EMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVA---GSLPD 550

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           +   + IH  ++   +  +  LGN+ I MYSKCG L +A+  F    ++   SWTA+I+ 
Sbjct: 551 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 610

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y ++G  ++AL+ F  M      P+  T  +++ + + L  +  G+ +H  +IR G    
Sbjct: 611 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 670

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             + G  L++ YA+CG + E  +    + ERN +SWN +IS YA  G +K A+++   M 
Sbjct: 671 V-FSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGML 729

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQ-----LGLQIHGHVIKIDCKDEFVQSSLIDMYSKC 446
             G  PDS +  S L+AC + G          L  H + I    K+ +  + +ID   + 
Sbjct: 730 HCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS-PWKEHY--ACVIDTLGRV 786

Query: 447 G-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           G F  +  +L E   +   ++W S++     +GN  E   +           D   ++  
Sbjct: 787 GCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQ-ELARVAADKLFGMEPTDATPYVIL 845

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKD 533
               +  GQ E    V   +   GVRK+
Sbjct: 846 SNIYARAGQWEDAACVKKIMRDRGVRKE 873



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 217/465 (46%), Gaps = 32/465 (6%)

Query: 220 GHVLRRKIKIDG-PLGNSF-----IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           GH+ R +   D  P  N F     +  YS  GDL +A+  F+    R  T+WT M+  + 
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 330

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLG--SCAGLGWLREGKSVHCQIIRKGMGPE 331
            +G    AL  F  ML     P+ +T+ TVL    C          S+H   I+ G+   
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-------VPSLHPFAIKFGLD-T 382

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           + ++   L++ Y + G ++   +V   + +++ +++N ++   +++G+  +AL+L   M+
Sbjct: 383 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 442

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
             G                +   L L    H         + FV +SL+D YSKC   + 
Sbjct: 443 RAGY---------------SRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDD 487

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
              LF+ + ++  V +N +I  +  N  +   + LF +M     +   + + T +    +
Sbjct: 488 MRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGS 547

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
           +  +  GK +H +L+  G+  +  +  AL DMY+KCG L  A+  F + SE++ +SW+A+
Sbjct: 548 LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTAL 607

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I  Y  +GQ  +A  LF  M  +G++P+  TF +I+ A S    +  G+   + +   G 
Sbjct: 608 ITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGY 667

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +  +   + +VD+ ++ G ++ A +    MP   N   W A+++ 
Sbjct: 668 KSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 711



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 2/193 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA L++ GL  +      LI+ Y++ G L +++  F    E  +  W  LI  Y+ N 
Sbjct: 556 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 615

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             EE++ L+  M R         + S+++A SSL  +G G ++H  +I+ G+ K  V   
Sbjct: 616 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGY-KSSVFSG 674

Query: 135 SILCT-YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           S+L   Y + GCLD+A + FD+M  R+ +SW+++I++Y    +    +KMF  M+  G  
Sbjct: 675 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 734

Query: 194 PDFVTMLSLAEAC 206
           PD VT LS+  AC
Sbjct: 735 PDSVTFLSVLAAC 747



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 4/159 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH++L+ +G      + + L++ YA+ G L  +   FD   E +S  W  +I  Y    
Sbjct: 657 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 716

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ- 133
             + +I ++  M+       +  + SVL ACS  G L      +  ++K  +      + 
Sbjct: 717 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG-LADECMKYFHLMKHQYSISPWKEH 775

Query: 134 -TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
              ++ T G  GC    +K+  +M  + D + W+SI+ S
Sbjct: 776 YACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 814


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/619 (30%), Positives = 317/619 (51%), Gaps = 43/619 (6%)

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D      ++  Y   G L +ARK+F++   ++ ++WSS+++ Y  N    EGL+ F  M
Sbjct: 66  RDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQM 125

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             +G +P   T+ S+  AC  L  L   + IH + ++ +++ +  +    + MYSKC  L
Sbjct: 126 WSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCL 185

Query: 248 LSAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L AE  F  + +++    WTAM++ Y ++G   KA++ F +M     E N  T  ++L +
Sbjct: 186 LEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTA 245

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C  +     G+ VH  II  G GP   Y+  AL++ YA+CG ++    ++  +   +++ 
Sbjct: 246 CTSISAYAFGRQVHGCIIWSGFGPNV-YVQSALVDMYAKCGDLASARMILDTMEIDDVVC 304

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +I      G  +EAL L  +M    +  D F+  S L +  +  +L++G  +H   I
Sbjct: 305 WNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTI 364

Query: 427 KID---CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           K     CK   V ++L+DMY+K G  + A  +F +I  K V+ W S++ G+  NG   +A
Sbjct: 365 KTGFDACKT--VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKA 422

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + LF  M    +++D+        AC+ +  +E G+ VH   I       +  + +L  M
Sbjct: 423 LQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITM 482

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG L+ A RVFDSM  RNV+SW+A+I  Y                            
Sbjct: 483 YAKCGCLEDAIRVFDSMETRNVISWTAIIVGY---------------------------- 514

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
                  + +G VE G+ YF +M +++G++P   HYACM+DLL R+G I  A  +++ M 
Sbjct: 515 -------AQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMD 567

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              + +IW +LL+ CR+H  +++ +   K L     +++  Y LLSN+++  G W++   
Sbjct: 568 VEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAH 627

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +R  M+  G+ K PGYS I
Sbjct: 628 IRRAMKTMGINKEPGYSWI 646



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 278/604 (46%), Gaps = 41/604 (6%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I +YA +G+L  +R +F+     +S  W+ L+  Y  N    E +  + +M  +    S
Sbjct: 74  MISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            +   SVLRACS+L  L +G+ +H   IK   + +  + T ++  Y +  CL +A  +F 
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193

Query: 155 KMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
            +  R + V W++++  Y  N +  + ++ F  M  +G+E +  T  S+  AC  + +  
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             R +HG ++      +  + ++ + MY+KCGDL SA      +E      W +MI    
Sbjct: 254 FGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV 313

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
             G+ ++AL  F KM       +  T  +VL S A    L+ G+SVH   I+ G      
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA-CK 372

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL++ YA+ G +S    V + I +++++SW  L++ Y   G  ++AL+L   M+T 
Sbjct: 373 TVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTA 432

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
            +  D F VA   SAC  +  ++ G Q+H + IK         ++SLI MY+KCG    A
Sbjct: 433 RVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDA 492

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ ++ ++V+ W ++I G+ QNG      + F  M                      
Sbjct: 493 IRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESM---------------------- 530

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAM 571
              EK          YG++        + D+  + G +  A+ + + M  E +   W ++
Sbjct: 531 ---EK---------VYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSL 578

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKP-NEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           +    +HG L       K ++   ++P N + ++ +    S +G  E+      AM+  G
Sbjct: 579 LSACRVHGNLELGERAGKNLIK--LEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMG 636

Query: 631 VEPD 634
           +  +
Sbjct: 637 INKE 640



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 223/482 (46%), Gaps = 38/482 (7%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C+ L  L     +H + +   L  +   +T L++ Y++   L  +  +F +  +  
Sbjct: 140 VLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRK 199

Query: 60  SFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +++ W  ++  Y  N    ++I  + +M  +    ++F +PS+L AC+S+     G +VH
Sbjct: 200 NYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVH 259

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G II  GF  +  +Q++++  Y + G L  AR + D M   DVV W+S+I     +  + 
Sbjct: 260 GCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYME 319

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L +FH M    +  D  T  S+ ++     +L+   S+H   ++        + N+ +
Sbjct: 320 EALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALV 379

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G+L  A   F KI  +   SWT++++ Y  +G+ +KAL+ F  M   + + +  
Sbjct: 380 DMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQF 439

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            +  V  +CA L  +  G+ VH   I+   G        +LI  YA+CG + +  +V  +
Sbjct: 440 VVACVFSACAELTVIEFGRQVHANFIKSSAGSLLS-AENSLITMYAKCGCLEDAIRVFDS 498

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVA-------------- 403
           +  RN++SW  +I  YA+ G+ +        M+  +G+ P S   A              
Sbjct: 499 METRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINE 558

Query: 404 ------------------SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSK 445
                             S LSAC   G+L+LG +   ++IK++  +      L +M+S 
Sbjct: 559 AEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSV 618

Query: 446 CG 447
            G
Sbjct: 619 AG 620



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 21/242 (8%)

Query: 474 FYQNGNSLEAINLF--HQMYLNCLE--------MDEVTFLTAIQACSNIGQLEKGKWVHH 523
           ++Q  N     N    H +++ C+         +D    L+ +   S  G++++ +    
Sbjct: 5   YFQTSNFFTKCNFHFKHPLFIRCIHGIAHYSSNLDSNQLLSEL---SKNGRVDEAR---- 57

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
           KL      +D Y    +   YA  G+L  A+++F+    +N ++WS+++  Y  +G   +
Sbjct: 58  KLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVE 117

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
               F QM   G KP++ T  ++L ACS    +  GK          +E ++     +VD
Sbjct: 118 GLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVD 177

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE--KELSVTGTNDN 701
           + S+   +  A  +  S+P   N   W A+L G    +  + +K I+  KE+   G   N
Sbjct: 178 MYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTG--YAQNGESLKAIQCFKEMRNQGMESN 235

Query: 702 GY 703
            +
Sbjct: 236 HF 237


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 176/545 (32%), Positives = 286/545 (52%), Gaps = 34/545 (6%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T   L +       L+  R++H  ++   ++ +  LG   +  Y+   D+ +A + F +I
Sbjct: 42  TAFMLGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEI 101

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +R       MI  Y  +G++++ ++ F  M     +P+  T   VL +C+  G +  GK
Sbjct: 102 PERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGK 161

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H    + G+     ++G  L+  Y +CG +SE   V+  +  R+++SWN L++ YA+ 
Sbjct: 162 KIHGSATKVGLSSTL-FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQN 220

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS 437
               +ALE+  +M++  +  D+ ++AS L A  N  +  +                    
Sbjct: 221 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-------------------- 260

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
               MY K         +F ++ +KS+V WN MI  + +N   +EA+ L+  M  +  E 
Sbjct: 261 ----MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEP 308

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D V+  + + AC +   L  GK +H  +    +  ++ ++ AL DMYAKCG L  A+ VF
Sbjct: 309 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVF 368

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           ++M  R+VVSW+AMI  YG  G+  DA +LF +M DSG+ P+ + F+  L ACSH+G +E
Sbjct: 369 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLE 428

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EG+  F  M   + + P L+H ACMVDLL R+G ++ A+K I  MP   N  +WGALL  
Sbjct: 429 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGA 488

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+H   D+      +L       +GYY LLSNIYA+ G W+E   +R+IM+  GLKK P
Sbjct: 489 CRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 548

Query: 737 GYSTI 741
           G S +
Sbjct: 549 GASNV 553



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 205/460 (44%), Gaps = 73/460 (15%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L+ L  +H+ ++   L Y+     +L+ +YA +  + ++R VFD   E +  +  V+I+
Sbjct: 55  DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK----- 123
            Y+ N F+ E I ++  M        ++ +P VL+ACS  G++  G+K+HG   K     
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSS 174

Query: 124 --------------CGF-----------DKDDVIQ-TSILCTYGEFGCLDDARKV----- 152
                         CGF            + DV+   S++  Y +    DDA +V     
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREME 234

Query: 153 --------------------------------FDKMTSRDVVSWSSIIASYFDNADVSEG 180
                                           F KM  + +VSW+ +I  Y  NA   E 
Sbjct: 235 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 294

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++++  M  +G EPD V++ S+  ACG+  +L   + IHG++ R+K+  +  L N+ I M
Sbjct: 295 VELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 354

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L  A   F  ++ R   SWTAMIS Y  SG    A+  F KM +    P+ I  
Sbjct: 355 YAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAF 414

Query: 301 ITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +T L +C+  G L EG+S          + P  ++L   +++     GK+ E  K I  +
Sbjct: 415 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA-CMVDLLGRAGKVKEAYKFIQEM 473

Query: 360 G-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
             E N   W  L+   A +  S   + LL   + + L P+
Sbjct: 474 PMEPNERVWGALLG--ACRVHSNTDIGLLAADKLFQLAPE 511


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 212/752 (28%), Positives = 350/752 (46%), Gaps = 16/752 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   C  L  L    R+H  +L  G+        RL+  Y + GS   +R VF   ++  
Sbjct: 46  LIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKS 105

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI     +   +E+  L+ +M  +    ++  Y +VL AC    ++   + +  
Sbjct: 106 VVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV---DTIRA 162

Query: 120 RIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           R+  CG  + D ++ T+++  YG+ G LD A  VFD +  RD   W+++I+    +    
Sbjct: 163 RVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGD 222

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L++F  M   GV P+  T ++   AC        A  IH          D  +  + +
Sbjct: 223 EALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALV 282

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY K G +  AE  F +I++R   SW AM++    +G+  KA + F +ML V E P+ I
Sbjct: 283 NMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRI 342

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD--YLGPALIEFYAEC----GKMSEC 352
           T + +L +C     L+ G  V    +  G G E     +G A++  Y+ C       S  
Sbjct: 343 TYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSS 402

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             +     + +I+ WN ++S Y      +EA  +   M   G+  D+ S+ +  +ACG+ 
Sbjct: 403 LLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSS 462

Query: 413 GSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
            SL+ G  IH  + + +  +   VQ++L+ MY++ G    A  +F+ +  ++V+ W +M+
Sbjct: 463 ASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMV 522

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
               Q G + EA+ +F  + L  +  +EVTF   + AC N+  +   K V   L   G  
Sbjct: 523 GVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFF 582

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            ++ +   L     KCG L+     F  M+ +N VSW+  I     HG       LF+ M
Sbjct: 583 GNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTM 642

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGD 650
              GI    VT + +L +CSH+G V +G  YF  M + +G   + +HY+C++DLLSR+G 
Sbjct: 643 QLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGW 702

Query: 651 IEGAFKMIHSMPFPANGSI-WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
           +E A + +  +PF       W  LL GC++H  ++      + +        G Y ++ N
Sbjct: 703 LEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHN 762

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +YA  G W E   VR  M   G KK PG S I
Sbjct: 763 LYAGAGKWPEAAAVRKSMVELGPKKEPGLSWI 794



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 170/616 (27%), Positives = 296/616 (48%), Gaps = 22/616 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + +++  C+ L DL  G ++HG I++ G +  D +   +L  Y + G  ++AR VF  + 
Sbjct: 43  FAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQ 102

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG---ELCSLRP 214
            + VV+W+S+I     +    E   +F  M  +GV P+ VT +++  ACG   E+ ++R 
Sbjct: 103 DKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRA 162

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
                G      +++D  +  + +  Y KCGDL SA   F  I  R    W AMIS    
Sbjct: 163 RVEACG-----SLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVA 217

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
                +ALE F +M      PN  T +  L +C       E   +H    R+  G     
Sbjct: 218 HEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHA-FARELAGDADTV 276

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  AL+  Y + GK+ + E++   I ER+++SWN +++  A  G   +A +   +M   G
Sbjct: 277 VQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVG 336

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ----SSLIDMYSKCGFKN 450
            +P   +  + L+AC     L+ G  +    ++  C  E V     +++++MYS+C    
Sbjct: 337 ELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPK 396

Query: 451 LAY----LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
            A+    LL +   Q S++MWN+++  + +N    EA  +F  M L  + +D V+ +T  
Sbjct: 397 SAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVF 456

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            AC +   LEKGKW+H  L    + +   +  AL  MYA+ G L+ A+ +FD+M+ RNV+
Sbjct: 457 NACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVI 516

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW+AM+  +   G   +A  +F+ +L  G+ PNEVTF  +L AC +  S+   K     +
Sbjct: 517 SWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACL 576

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH----KR 682
              G   +++    ++  L + G +E        M    N   W   +     H    + 
Sbjct: 577 SETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK-NQVSWNTAIAANAQHGNGVRG 635

Query: 683 IDVMKTIEKELSVTGT 698
           +++ +T++ E   TG+
Sbjct: 636 VELFQTMQLEGIDTGS 651



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 227/478 (47%), Gaps = 17/478 (3%)

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T  +L   C  L  L   R IHG +LR  I++   LG   + MY KCG    A   F
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             I+ +   +WT++I    RSG  ++A   F +M      PN +T + VLG+C G  W  
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC-GHPW-- 155

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           E  ++  ++   G       +  A++  Y +CG +     V   I  R+   WN +IS  
Sbjct: 156 EVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDE 433
                  EALEL  QM+  G+ P+  +  ++L+AC +       L+IH    ++    D 
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADT 275

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            VQ++L++MY K G  + A  +FERIQ++ VV WN+M+     NG   +A   F +M L 
Sbjct: 276 VVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLV 335

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV---RKDIYIDTALTDMYAKCGDL 550
                 +T++  + AC     L+ G +V    +  G      D+ + TA+ +MY++C   
Sbjct: 336 GELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRC--- 392

Query: 551 QTAQRVFDS-------MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           ++ +  F S         + +++ W+ ++  Y  + Q  +A ++F+ ML  G+  + V+ 
Sbjct: 393 KSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSL 452

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           M +  AC  S S+E+GK+  + +    +         +V + +R G +E A ++  +M
Sbjct: 453 MTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAM 510



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 105/211 (49%), Gaps = 3/211 (1%)

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
           Y +    D  TF   I  C+ +  L +G+ +H  ++  G+    ++   L  MY KCG  
Sbjct: 32  YFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSP 91

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           + A+ VF  + +++VV+W+++I      G   +A  LF++M   G+ PN+VT++ +L AC
Sbjct: 92  EEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC 151

Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
            H   V+  +    A     +E D+     +++   + GD++ A+ +   +    + ++W
Sbjct: 152 GHPWEVDTIRARVEACG--SLELDVIVATAVMNAYGKCGDLDSAWGVFDGI-LVRDAAVW 208

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
            A+++    H++ D    + +++ + G   N
Sbjct: 209 NAMISLLVAHEQGDEALELFRQMRLGGVTPN 239


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 187/589 (31%), Positives = 315/589 (53%), Gaps = 26/589 (4%)

Query: 177 VSEGLKMFHSMVREGV----EPDFVTMLS------LAEACGELCSLRPARSIHGHVLRRK 226
           V  G +  HS+++  V    EP   T +       L + C +      AR IHGH+++  
Sbjct: 29  VGVGFQKNHSLIQLNVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTG 88

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
              D  +    + +YSKCG + SA + F  + +R   +WT +++ Y ++     AL+ F+
Sbjct: 89  FHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFI 148

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAE 345
           KMLE    P+  TL  VL +C+ L  +  GK VH  +I+  +  ++D  +G +L  FY++
Sbjct: 149 KMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHI--DFDTSIGNSLSSFYSK 206

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
             ++    K    I E++++SW  +IS     G +  +L   + M + G+ P+ +++ S 
Sbjct: 207 FRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSV 266

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
           LSAC  + +L LG QIH   IK+       +++S++ +Y KCG+   A  LFE ++  ++
Sbjct: 267 LSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNL 326

Query: 465 VMWNSMICGFYQNGNSLE-----------AINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           V WN+MI G  +  +  E           A+ +F ++Y + ++ D  TF + +  CSN+ 
Sbjct: 327 VTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLV 386

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LE+G+ +H ++I  GV  D+ + TAL  MY KCG +  A + F  M  R ++SW++MI 
Sbjct: 387 ALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMIT 446

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
            +  HG    A  LF+ M   GIKPN+VTF+ +L ACSH+G  +E  +YF  M + + ++
Sbjct: 447 GFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIK 506

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P + H+AC++D+  R G +E AF ++H M F  N +IW  L+ GCR H + D+     ++
Sbjct: 507 PVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQ 566

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L      D   Y  L N++   G W +  KVR +M+   + K+  +S I
Sbjct: 567 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWI 615



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 272/529 (51%), Gaps = 19/529 (3%)

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           S++ +P +L+ C           +HG I+K GF +D  + T ++  Y + G ++ A KVF
Sbjct: 58  SSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 116

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D +  R+V +W++++  Y  N+     L++F  M+  G  P   T+  +  AC  L S+ 
Sbjct: 117 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE 176

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             + +H ++++  I  D  +GNS    YSK   L  A + F  I+++   SWT++IS   
Sbjct: 177 FGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 236

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
            +G   ++L  F+ ML    +PN  TL +VL +C  +  L  G  +H   I+ G G    
Sbjct: 237 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSI- 295

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR-----------KGMSKE 382
            +  +++  Y +CG + E +K+   +   N+++WN +I+ +A+                 
Sbjct: 296 LIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGST 355

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
           AL +  ++   G+ PD F+ +S LS C N+ +L+ G QIHG +IK     D  V ++L+ 
Sbjct: 356 ALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVS 415

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY+KCG  + A   F  +  ++++ W SMI GF ++G S +A+ LF  M L  ++ ++VT
Sbjct: 416 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVT 475

Query: 502 FLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           F+  + ACS+ G  ++  +    +   Y ++  +     L DMY + G ++ A  V   M
Sbjct: 476 FVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKM 535

Query: 561 S-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV-TFMNIL 607
           + E N   WS +I     HG+ +      +Q+L   +KP +V T++++L
Sbjct: 536 NFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLL 582



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 179/655 (27%), Positives = 295/655 (45%), Gaps = 85/655 (12%)

Query: 2   PLFRSCT--NLRKLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           PL + C   NL    R+ H H++ TG H D    T L+  Y++ G + S+  VFD     
Sbjct: 63  PLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRR 122

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +   W  L+  Y+ N+    ++ L+ KM+   A  SN+    VL ACSSL  +  G++VH
Sbjct: 123 NVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 182

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +IK   D D  I  S+   Y +F  L+ A K F  +  +DV+SW+S+I+S  DN   +
Sbjct: 183 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 242

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L  F  M+ +G++P+  T+ S+  AC  + +L     IH   ++        + NS +
Sbjct: 243 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 302

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY-------------NRSGWFQKALESF 285
            +Y KCG L+ A++ F  +E     +W AMI+ +             ++SG    AL  F
Sbjct: 303 YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG--STALAMF 360

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
            K+     +P+L T  +VL  C+ L  L +G+ +H QII+ G+  +   +G AL+  Y +
Sbjct: 361 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADV-VVGTALVSMYNK 419

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
           CG + +  K    +  R ++SW  +I+ +AR G+S++AL+L   M+  G+ P+  +    
Sbjct: 420 CGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGV 479

Query: 406 LSACGNVGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           LSAC + G     L     + K        D F  + LIDMY + G          R++ 
Sbjct: 480 LSACSHAGLADEALYYFELMQKQYNIKPVMDHF--ACLIDMYLRLG----------RVE- 526

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
                               EA ++ H+M     E +E  +   I  C + G+ + G + 
Sbjct: 527 --------------------EAFDVVHKMN---FEPNETIWSMLIAGCRSHGKSDLGFYA 563

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
             +L+     KD+    +L +M+   G  +   +V   M E  V             G+L
Sbjct: 564 AEQLLKLK-PKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKV-------------GKL 609

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY---FNAMRIFGVEP 633
            D + +  +      KPN+          SH  S+E  K      N ++  G EP
Sbjct: 610 KDWSWISIKEKVYSFKPNDK---------SHCQSLEMYKLLETVLNEVKALGYEP 655


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 198/658 (30%), Positives = 349/658 (53%), Gaps = 22/658 (3%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM--TS 158
           +L+ C    +   G+ +H ++       D ++  S++  Y +      A  +F  M  + 
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARS 217
           RDVVS+SSII+ + +N +  + ++MF  ++ ++GV P+     ++  AC +    +    
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177

Query: 218 IHGHVLRRK-IKIDGPLGNSFIVMYSK---CGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
           + G VL+         +G   I M+ K     DL SA + F K+ ++   +WT MI+   
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237

Query: 274 RSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           + G+  +A++ F++ML      P+  TL  ++  CA + +L  GK +H  +IR G+  + 
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG--MSKEALELLVQM 390
             +G +L++ YA+CG + E  KV   + E N++SW  L++ Y R G    +EA+ +   M
Sbjct: 298 -CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNM 356

Query: 391 QTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-----IDCKDEFVQSSLIDMYS 444
              G + P+ F+ +  L AC ++     G Q+HG  IK     IDC    V + L+ +Y+
Sbjct: 357 LLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDC----VGNGLVSVYA 412

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           K G    A   F+ + +K++V    +     ++ N     +L  ++      +   T+ +
Sbjct: 413 KSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYAS 472

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            +   + IG + KG+ +H  ++  G R D+ ++ AL  MY+KCG+ + A +VF+ M + N
Sbjct: 473 LLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCN 532

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           V++W+++I+ +  HG  + A  LF  ML++G+KPN+VT++ +L ACSH G ++E   +F 
Sbjct: 533 VITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFT 592

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           +MR   G+ P ++HYACMVDLL RSG +  A + I+SMPF A+  +W   L  CR+H+  
Sbjct: 593 SMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNT 652

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + +   K +     +D   Y LLSN+YA EG W++   +R  M+   + K  G S I
Sbjct: 653 KLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWI 710



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 161/586 (27%), Positives = 288/586 (49%), Gaps = 19/586 (3%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP--DSFMWAV 65
           T+L KL  LH  L  + L  D      LI  Y++     ++  +F + +    D   ++ 
Sbjct: 68  THLGKL--LHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSS 125

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
           +I C+  N    +++ ++ +++ +     N + + +V+RAC   G   +G  + G ++K 
Sbjct: 126 IISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKT 185

Query: 125 GFDKDDVIQTSILCTYGEFGC----LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           G+    V     L      GC    L+ ARKVFDKM  ++VV+W+ +I          E 
Sbjct: 186 GYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEA 245

Query: 181 LKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           + +F  M V  G  PD  T+  L   C E+  L   + +H  V+R  + +D  +G S + 
Sbjct: 246 IDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVD 305

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR--SGWFQKALESFVKM-LEVKEEPN 296
           MY+KCG +  A + F  + +    SWTA+++ Y R   G+ ++A+  F  M L+    PN
Sbjct: 306 MYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPN 365

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T   VL +CA L     G+ VH Q I+ G+    D +G  L+  YA+ G+M    K  
Sbjct: 366 CFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSA-IDCVGNGLVSVYAKSGRMESARKCF 424

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             + E+N++S  ++     +        +L  +++  G    SF+ AS LS    +G++ 
Sbjct: 425 DVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIG 484

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G QIH  V+KI  + +  V ++LI MYSKCG K  A  +F  ++  +V+ W S+I GF 
Sbjct: 485 KGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFA 544

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKD 533
           ++G + +A+ LF+ M    ++ ++VT++  + ACS++G +++  W H   +  ++G+   
Sbjct: 545 KHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEA-WKHFTSMRDNHGIVPR 603

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
           +     + D+  + G L  A    +SM  + + + W   +    +H
Sbjct: 604 MEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVH 649



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 185/377 (49%), Gaps = 9/377 (2%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   C  ++ L+    LH+ ++ +GL  D      L++ YA+ G ++ +R VFD  +E +
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHN 327

Query: 60  SFMWAVLIKCYM--WNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEK 116
              W  L+  Y+     +  E++ ++  M+ +     N F +  VL+AC+SL D   GE+
Sbjct: 328 VMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQ 387

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           VHG+ IK G    D +   ++  Y + G ++ ARK FD +  +++VS + +  +   + +
Sbjct: 388 VHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFN 447

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           ++    +   +   G      T  SL      + ++     IH  V++   + D  + N+
Sbjct: 448 LNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNA 507

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MYSKCG+  +A + F  +E     +WT++I+ + + G+  KALE F  MLE   +PN
Sbjct: 508 LISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPN 567

Query: 297 LITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
            +T I VL +C+ +G + E  K         G+ P  ++    +++     G +SE  + 
Sbjct: 568 DVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYA-CMVDLLGRSGLLSEAIEF 626

Query: 356 IHAIG-ERNILSWNMLI 371
           I+++  + + L W   +
Sbjct: 627 INSMPFDADALVWRTFL 643


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 207/687 (30%), Positives = 336/687 (48%), Gaps = 52/687 (7%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
           +F   S L AC++L    SG ++H   I+ G      +  ++L  Y +   L   ++VF+
Sbjct: 53  HFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFN 112

Query: 155 KMTSRDVVSWSS-------------------------------IIASYFDNADVSEGLKM 183
           ++ + DV SW++                               II    +N      L +
Sbjct: 113 EIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNL 172

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  M + GV  D  T  S+   C  L  L   R +H  V++    +   + N+ + MY  
Sbjct: 173 FREMHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLTMYFN 231

Query: 244 CGDLLSAERTFVKIEKRC--TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            G +  A   F + E       ++  MI      G  ++AL  F +M E    P  +T +
Sbjct: 232 SGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFV 291

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP---ALIEFYAECGKMSECEKVIHA 358
           +V+ SC+     R    VH Q I+ G    ++   P   A +  Y+ CG +     V   
Sbjct: 292 SVMSSCSSA---RVSHQVHAQAIKMG----FEACTPVSNAAMTMYSSCGNLHAVHMVFDR 344

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E++++SWN++I  YA+    + A+   +QMQ  G+ PD F++ S L++     SL++ 
Sbjct: 345 LEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSE---SLEIV 401

Query: 419 LQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
                 V K  ++ K E V ++L+  +SK G    AY +F  +   +++ WN++I GF  
Sbjct: 402 KMFQALVSKNGLNSKIE-VSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLF 460

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG +L+ +  F+++ ++ L+ +  T    +  C++I  L  GK +H  ++  GV     +
Sbjct: 461 NGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSL 520

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS-G 595
             AL  MYAKCGDL  + R+F+ M+ R++VSW+AMI  Y  HG+  +A   FK M DS G
Sbjct: 521 GNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGG 580

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           +KP++ TF  +L ACSH+G V++G   FN+M   +G EP   H +C+VDLL R+G +E A
Sbjct: 581 VKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEA 640

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
            ++I+S       SIW  L + C  H  + + + +   L     ND   Y LLSNIYA  
Sbjct: 641 ERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAA 700

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G W+E    R +M+ T + K PG S I
Sbjct: 701 GQWEEAANTRDLMQKTRVAKQPGCSWI 727



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/616 (24%), Positives = 298/616 (48%), Gaps = 48/616 (7%)

Query: 6   SCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +C NLR      +LHA+ + TGL         L+  YA+   L S + VF+  + PD + 
Sbjct: 62  ACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYS 121

Query: 63  WAVLIK-----------CYM-----------WNNFF---------EESILLYHKMIREQA 91
           W  L+            C++           WN            E ++ L+ +M +   
Sbjct: 122 WTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGV 181

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
               + + SVL  C SL  L  G +VH  +IK GF     +  ++L  Y   G + DA +
Sbjct: 182 RHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYE 240

Query: 152 VFDKM--TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
           VF++   T  D ++++ +I          E L MF  M    + P  +T +S+  +C   
Sbjct: 241 VFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS-- 298

Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
            S R +  +H   ++   +   P+ N+ + MYS CG+L +    F ++E++   SW  +I
Sbjct: 299 -SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIII 357

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
             Y +  +++ A+ +F++M     EP+  T+ ++L S   L  ++  +++   + + G+ 
Sbjct: 358 MNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQAL---VSKNGLN 414

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            + + +  AL+  +++ G++ +  +V + +   N++SWN +IS +   G + + LE   +
Sbjct: 415 SKIE-VSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYE 473

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGF 448
           +    L P++++++  LS C ++ +L+ G QIHG++++        + ++LI MY+KCG 
Sbjct: 474 LLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGD 533

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQ 507
            + +  +F  +  + +V WN+MI  + Q+G   EA++ F  M     ++ D+ TF   + 
Sbjct: 534 LDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLS 593

Query: 508 ACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
           ACS+ G ++ G  + + +++ YG        + + D+  + G L+ A+R+ +S   + V 
Sbjct: 594 ACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVS 653

Query: 567 S-WSAMIDCYGMHGQL 581
           S W  +      HG L
Sbjct: 654 SIWWTLFSACAAHGNL 669



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 238/533 (44%), Gaps = 59/533 (11%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           ++PD  T+ S   AC  L        +H + ++  +K    +GN+ +  Y+K  DL+S +
Sbjct: 49  LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 108

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWF-------------------------------QK 280
           R F +IE     SWT ++S   + G                                 + 
Sbjct: 109 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEI 168

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           AL  F +M ++    +  T  +VL  C+ L  L  G+ VH  +I+ G       +  AL+
Sbjct: 169 ALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVIN-ALL 226

Query: 341 EFYAECGKMS-------ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
             Y   GK++       E E  +H     + +++N++I   A  G  +EAL +  +MQ  
Sbjct: 227 TMYFNSGKVADAYEVFEEAESTVH-----DDITFNVMIGGLASVGRDEEALIMFKEMQEA 281

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLA 452
            L P   +  S +S+C    S ++  Q+H   IK+  +    V ++ + MYS CG  +  
Sbjct: 282 CLRPTELTFVSVMSSC---SSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAV 338

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
           +++F+R+++K ++ WN +I  + Q      AI  F QM    +E DE T  + + +  + 
Sbjct: 339 HMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSES- 397

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             LE  K     +   G+   I +  AL   ++K G ++ A +VF++MS  N++SW+ +I
Sbjct: 398 --LEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTII 455

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             +  +G        F ++L S +KPN  T   +L  C+   ++  GK     +   GV 
Sbjct: 456 SGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVF 515

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS---IWGALLNGCRIHKR 682
                   ++ + ++ GD++ + ++ + M    NG     W A+++    H +
Sbjct: 516 SVTSLGNALITMYAKCGDLDWSLRIFNVM----NGRDIVSWNAMISAYAQHGK 564



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 142/284 (50%), Gaps = 38/284 (13%)

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVG--------- 413
           ++  N L++E  R   +  +++L VQ+ +   L PD F+++S+L+AC N+          
Sbjct: 17  LIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLH 76

Query: 414 --SLQLGLQIHGHV---------------------IKIDCKDEFVQSSLIDMYSKCGFKN 450
             S+Q GL+ + HV                      +I+  D +  ++L+   +K G   
Sbjct: 77  AYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIG 136

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  LF +  +   V+WN++I G  +N ++  A+NLF +M+   +  D+ TF + +  CS
Sbjct: 137 YACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS 196

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV---VS 567
            +  L+ G+ VH  +I  G      +  AL  MY   G +  A  VF+  +E  V   ++
Sbjct: 197 -LELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEE-AESTVHDDIT 254

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           ++ MI      G+  +A  +FK+M ++ ++P E+TF++++ +CS
Sbjct: 255 FNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS 298



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 103/205 (50%), Gaps = 1/205 (0%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  S  +L  +    A +   GL+     S  L+ ++++ G +  +  VF+    P+   
Sbjct: 391 LLASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLIS 450

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  +I  +++N F  + +  +++++      + +    VL  C+S+  L  G+++HG I+
Sbjct: 451 WNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYIL 510

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G      +  +++  Y + G LD + ++F+ M  RD+VSW+++I++Y  +    E + 
Sbjct: 511 RSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVH 570

Query: 183 MFHSMVRE-GVEPDFVTMLSLAEAC 206
            F +M    GV+PD  T  ++  AC
Sbjct: 571 FFKAMQDSGGVKPDQATFTAVLSAC 595



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 5/186 (2%)

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           + ++  N ++    ++ ++  ++ LF Q++  N L+ D  T  + + AC+N+     G  
Sbjct: 15  EQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQ 74

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H   I  G++   ++   L   YAK  DL + QRVF+ +   +V SW+ ++      GQ
Sbjct: 75  LHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQ 134

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
           +  A  LF Q     + P  V +  I+  C+ +   E     F  M   GV  D   +A 
Sbjct: 135 IGYACHLFNQ--TPRMIP--VVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFAS 190

Query: 641 MVDLLS 646
           ++ L S
Sbjct: 191 VLSLCS 196


>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
 gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
          Length = 763

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 214/699 (30%), Positives = 348/699 (49%), Gaps = 20/699 (2%)

Query: 28  DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
           D  A   L+  YA+ GSL  +R  F+  +  D+  W  LI  Y  N    E++ L+ +M 
Sbjct: 66  DSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMA 125

Query: 88  REQATISNFIYPSVLRACSSLGD-LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL 146
            E        Y + L AC+SL   L  G  VH +    G D    +  +++  Y + G L
Sbjct: 126 DEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSL 185

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
            DA+KVFD   +RD V+W++++  Y +N +    L +F  M ++G   +     SL   C
Sbjct: 186 LDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLREC 245

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
               +L     IH  ++  +   D  +GN  + MY+KCGDL  A + F  IE+R + SWT
Sbjct: 246 ISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWT 305

Query: 267 AMISCYNRSGWFQKALESFVKM-LE-VKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
            M++ Y   G  ++ L  F  M LE  + + +  TL  VL +C+ LG   EG+++H +++
Sbjct: 306 VMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLV 365

Query: 325 RKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
               G E D  L  AL+  YA+C  + E  +V   I +++ +SW  +IS Y +     E+
Sbjct: 366 --ACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDES 423

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV---IKIDCKDE--FVQSS 438
           L++ + M   G+ PD  ++++  +AC  +     GL +   V   I++   D+   V ++
Sbjct: 424 LKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTA 483

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+ MY++CG    A  +F ++  K VV WN+M+    + G + EA+ L  +M    +  D
Sbjct: 484 LVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPD 543

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
             TF   + ACS +      + VH ++ + G+       TAL  MYAKCG L  A  VF+
Sbjct: 544 AATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFE 603

Query: 559 SMSERNVV---SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
            M   +V+   +W++++     HG    A   F+ M  + ++P+ +T   +L ACSHSG 
Sbjct: 604 RMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGL 663

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           +  G  YF +M   FG+ P  +HYAC++DLL R+G    A ++I  MPF  +   W  LL
Sbjct: 664 LATGLDYFLSMLHDFGLAPAAEHYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLL 723

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTND---NGYYTLLSNI 710
             C+  K  D  +     + +   +    +  Y LLSNI
Sbjct: 724 ASCQTSK--DAGRGSRAAMQLIRMDPLLHDSSYVLLSNI 760



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 165/578 (28%), Positives = 286/578 (49%), Gaps = 16/578 (2%)

Query: 10  LRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           LR L R   +H+    +G    P  +  LI+ Y++ GSL  ++ VFD+ +  D+  W  +
Sbjct: 147 LRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAM 206

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           +  Y  N   E ++ L+  M ++    +   Y S+LR C S   L  G ++H R+I    
Sbjct: 207 MLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGARIHARLIAIEK 266

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
           DKD  I   ++  Y + G L  ARK F  +  R+ VSW+ ++A+Y D+    +GL +FH+
Sbjct: 267 DKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHT 326

Query: 187 MVREGVEPDF--VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
           M  EG + D    T+  +  AC  L +    ++IH  ++    ++D PL N+ + MY+KC
Sbjct: 327 MDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKC 386

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
             L  A R F  I+ +   SWT++IS Y +     ++L+ F+ M     +P+ +TL  + 
Sbjct: 387 HCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALC 446

Query: 305 GSCAGL----GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
            +C  L      L  G+ VH + IR     +   +G AL+  YA CG + E   V + + 
Sbjct: 447 AACCQLEDRGRGLAVGRGVHTR-IRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLT 505

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
            ++++SWN +++     G ++EAL L  +M+  G+MPD+ + A  ++AC  +        
Sbjct: 506 PKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRA 565

Query: 421 IHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVV---MWNSMICGFYQ 476
           +H  V         V  ++L+ MY+KCG  + A  +FER+Q+ SV+    WNS++    +
Sbjct: 566 VHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAK 625

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIY 535
           +G+   A+  F  M +  ++ D +T    + ACS+ G L  G  +    L  +G+     
Sbjct: 626 HGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFLSMLHDFGLAPAAE 685

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
               L D+  + G    A+ V   M    + V+W  ++
Sbjct: 686 HYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLL 723



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 261/543 (48%), Gaps = 52/543 (9%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV--------------- 161
           +H   ++ G + D  +  +++  +   G L +AR VFD+M  RDV               
Sbjct: 17  LHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNSLVNM 76

Query: 162 ----------------------VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
                                 VSW+++I +Y +N    E L++F  M  EG  PD  T 
Sbjct: 77  YAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTY 136

Query: 200 LSLAEACGELCSLRP-ARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDLLSAERTFVK 256
           L+   AC  L  LR   R +  H   R    D    + N+ I MYSKCG LL A++ F  
Sbjct: 137 LAALVACASL--LRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDS 194

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
            + R   +WTAM+  Y  +G  ++AL  F  M +     N     ++L  C     L  G
Sbjct: 195 TQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERG 254

Query: 317 KSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
             +H ++I   +  + D  +G  L++ YA+CG +    K  ++I  RN +SW ++++ Y 
Sbjct: 255 ARIHARLI--AIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYI 312

Query: 376 RKGMSKEALELLVQMQTWGLMP--DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
             G  ++ L L   M   G     D+F+++  LSAC ++G+   G  IH  ++    + D
Sbjct: 313 DHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELD 372

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             +Q++L+ MY+KC     A  +F+ IQ KS V W S+I  + Q+    E++ +F  M L
Sbjct: 373 IPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNL 432

Query: 493 NCLEMDEVTFLTAIQACSNIGQ----LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           + ++ DE+T      AC  +      L  G+ VH ++   G  ++  + TAL  MYA+CG
Sbjct: 433 DGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCG 492

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  A  VF+ ++ ++VVSW+AM+      G+  +A  L ++M   G+ P+  TF  ++ 
Sbjct: 493 CLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVA 552

Query: 609 ACS 611
           ACS
Sbjct: 553 ACS 555



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 218/429 (50%), Gaps = 13/429 (3%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L R C + R L    R+HA L+      D      L++ YA+ G L  +R  F + +  +
Sbjct: 241 LLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRN 300

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKV 117
           S  W V++  Y+ +   E+ + L+H M  E  QA +  F    VL ACSSLG    G+ +
Sbjct: 301 SVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAI 360

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H R++ CG++ D  +Q +++  Y +  CL++AR+VFD +  +  VSW+SII++Y  +   
Sbjct: 361 HARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERG 420

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGEL----CSLRPARSIHGHVLRRKIKIDGPL 233
            E LKMF +M  +G++PD +T+ +L  AC +L      L   R +H  +       +  +
Sbjct: 421 DESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVV 480

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
           G + + MY++CG LL A   F K+  +   SW AM++    +G  ++AL    +M     
Sbjct: 481 GTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGV 540

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            P+  T   V+ +C+ L      ++VH ++  +G+   +   G AL+  YA+CG++ +  
Sbjct: 541 MPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDG-HPVSGTALVCMYAKCGRLDDAT 599

Query: 354 KVIHAIGERNIL---SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
            V   +   ++L   +WN +++  A+ G    A+E    M    + PD  ++   L AC 
Sbjct: 600 TVFERMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACS 659

Query: 411 NVGSLQLGL 419
           + G L  GL
Sbjct: 660 HSGLLATGL 668



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 196/401 (48%), Gaps = 6/401 (1%)

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECG 347
           +E+  E +     TV+   +  G L   ++V  +++R+ +    D Y   +L+  YA+CG
Sbjct: 22  VEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNSLVNMYAKCG 81

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            + E       +  R+ +SW  LI  Y   G   EALEL  +M   G +PD  +  ++L 
Sbjct: 82  SLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTYLAALV 141

Query: 408 ACGNV-GSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           AC ++   L+ G+ +H       C    FV ++LIDMYSKCG    A  +F+  Q +  V
Sbjct: 142 ACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQARDAV 201

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            W +M+ G+ +NG +  A++LF  M       +   + + ++ C +   LE+G  +H +L
Sbjct: 202 AWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGARIHARL 261

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
           I+    KD  I   L  MYAKCGDL  A++ F S+  RN VSW+ M+  Y  HG+     
Sbjct: 262 IAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGL 321

Query: 586 SLFKQMLDSGIKP--NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
            LF  M   G +   +  T   +L ACS  G+  EG+     +   G E D+     +V 
Sbjct: 322 CLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVT 381

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           + ++   +E A ++  ++   +  S W ++++    H+R D
Sbjct: 382 MYAKCHCLEEARRVFDNIQDKSRVS-WTSIISAYVQHERGD 421



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 27/236 (11%)

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW-- 568
            +  L+K   +H   +  G   D ++   + D++++CG L  A+ VFD M  R+VVSW  
Sbjct: 7   KVASLDKCCALHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWND 66

Query: 569 ----SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
               +++++ Y   G L +A + F+++     + + V++  ++ A + +G   E    F+
Sbjct: 67  SYALNSLVNMYAKCGSLVEARAEFEKLQ----RRDAVSWTTLILAYTENGRGGEALELFS 122

Query: 625 AMRIFGVEPDLQHY-------ACMVDLLSRSGDIEGAFKM--IHSMPFPANGSIWGALLN 675
            M   G  PD + Y       A ++  L R  D+    +     S+PF AN  I      
Sbjct: 123 RMADEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLI------ 176

Query: 676 GCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
              ++ +   +   +K    T   D   +T +   YAE G  +    + + ME  G
Sbjct: 177 --DMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQG 230


>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/608 (30%), Positives = 326/608 (53%), Gaps = 19/608 (3%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L DA  +FD+M  +++V+W+S ++    N      +  F  MV  GV P+     +  
Sbjct: 41  GSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNAAL 100

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC +  +LR    +H   +R     D  +G+S + +YS+CGDL +A+  F ++E     
Sbjct: 101 AACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVV 160

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
            +T+++S + RSG F+ A+++  +ML    EPN  T+ ++LGSC        G+ VH  +
Sbjct: 161 GYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPFVL---GEQVHAYM 217

Query: 324 IRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I+  G+  +  Y   ALI+FY+   +    + V + +  +N+++W  ++  + R G  ++
Sbjct: 218 IKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPED 277

Query: 383 ALELLVQMQTWGLM-PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
           AL++   M + G++ P+ F+ + +L AC   GS+ LG Q+H   IK +   +  V ++L+
Sbjct: 278 ALQVFDDMISEGVVEPNEFAFSIALGAC---GSIALGRQLHSSAIKRNLTSDLRVSNALL 334

Query: 441 DMYSK-CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
            MY + C  + L  +L + I+   +V W + I   +QNG S +AI L   ++   L  ++
Sbjct: 335 SMYGRICHVQELEAVL-KDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPND 393

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
             F +A+ +C+++  L++G+  H   +  G    I    AL ++Y+KCG +  A+  FD 
Sbjct: 394 YAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDV 453

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSHSGSVEE 618
           M  R+V SW+++I  Y  HG  + A  +F +M    G +P+E +F+ +L AC+H+G V E
Sbjct: 454 MDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNE 513

Query: 619 GKFYFNAM---RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           G   F A+      G  P   HYAC+VD++ RSG  + A +++  MPF     IW  LL 
Sbjct: 514 GVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLA 573

Query: 676 GCRIHKRIDVMKTIEK---ELSVTGTN-DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
            CR+H  ++  +   +   ELS  G + D+  Y L+S I+A  G W +  +VR  M+  G
Sbjct: 574 SCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIHAMRGEWRDAYRVRRRMDEAG 633

Query: 732 LKKVPGYS 739
           ++K  G S
Sbjct: 634 VRKEAGCS 641



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 273/557 (49%), Gaps = 20/557 (3%)

Query: 34  RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
           RL++S    GSL  +  +FD     +   W   +     N   E ++  +  M+      
Sbjct: 36  RLMKS----GSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAP 91

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           ++F + + L AC+    L +GE+VH   ++ GF  D  + +S++  Y   G L  A+ VF
Sbjct: 92  NDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVF 151

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D+M S DVV ++S+++++  + +    +   H M+R+GVEP+  TM S+  +C   C   
Sbjct: 152 DRMESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSC---CPFV 208

Query: 214 PARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
               +H ++++        +   ++ I  YS+  +   A+  F  +  +   +W +M+  
Sbjct: 209 LGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQL 268

Query: 272 YNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           + R G  + AL+ F  M+ E   EPN       LG+C   G +  G+ +H   I++ +  
Sbjct: 269 HIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGAC---GSIALGRQLHSSAIKRNLTS 325

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
           +   +  AL+  Y     + E E V+  I   +I+SW   IS   + G S++A+ LL  +
Sbjct: 326 DL-RVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSML 384

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFK 449
            + GLMP+ ++ +S+LS+C ++  L  G Q H   +K+ C  +    ++LI++YSKCG  
Sbjct: 385 HSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQI 444

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQA 508
             A L F+ +  + V  WNS+I G+ Q+G++  A+ +F +M  +   E DE +FL  + A
Sbjct: 445 APAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAA 504

Query: 509 CSNIGQLEKGKWVHHKLIS---YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-N 564
           C++ G + +G  +   + S   +G          + DM  + G    A R+ + M  R  
Sbjct: 505 CNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPG 564

Query: 565 VVSWSAMIDCYGMHGQL 581
            + W  ++    +HG L
Sbjct: 565 ALIWKTLLASCRLHGNL 581



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 251/540 (46%), Gaps = 27/540 (5%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR   ++H+  +  G   D    + L+E Y+  G L +++ VFD  + PD   +  L+  
Sbjct: 109 LRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSA 168

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC-GFDK 128
           +  +  FE ++   H+M+R+    +     S+L +C        GE+VH  +IK  G   
Sbjct: 169 FCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCP---FVLGEQVHAYMIKAMGLHS 225

Query: 129 DDVIQTSILCT-YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
             +  +S L   Y      D A+ VF+ +  ++VV+W S++  +  +    + L++F  M
Sbjct: 226 QSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDM 285

Query: 188 VREG-VEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           + EG VEP +F   ++L  ACG   S+   R +H   ++R +  D  + N+ + MY +  
Sbjct: 286 ISEGVVEPNEFAFSIALG-ACG---SIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRIC 341

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVL 304
            +   E     IE     SWT  IS   ++G+ +KA+ + + ML  +   PN     + L
Sbjct: 342 HVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAI-ALLSMLHSRGLMPNDYAFSSAL 400

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            SCA L  L +G+  HC  ++ G   +    G ALI  Y++CG+++  +     +  R++
Sbjct: 401 SSCADLALLDQGRQFHCLALKLGCDLKI-CTGNALINLYSKCGQIAPAKLAFDVMDHRDV 459

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSACGNVGSLQLGL---- 419
            SWN LI  YA+ G +  AL++  +M++  G  PD  S    L+AC + G +  G+    
Sbjct: 460 TSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFR 519

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            I  H            + ++DM  + G F +   L+ E   +   ++W +++     +G
Sbjct: 520 AIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHG 579

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW-----VHHKLISYGVRKD 533
           N LE   L  +  +   E  E     +    S I  + +G+W     V  ++   GVRK+
Sbjct: 580 N-LETGELAAERLMELSEGGEDRDSASYVLMSGIHAM-RGEWRDAYRVRRRMDEAGVRKE 637



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 7/182 (3%)

Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
           DCK        +D   K G    A  LF+R+ +K++V W S + G  +NG    A+  F 
Sbjct: 30  DCKR-------LDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFA 82

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
            M  + +  ++  F  A+ AC++   L  G+ VH   +  G   D ++ ++L ++Y++CG
Sbjct: 83  DMVASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCG 142

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
           DL  A+ VFD M   +VV +++++  +   G+   A     QML  G++PNE T  +IL 
Sbjct: 143 DLGAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILG 202

Query: 609 AC 610
           +C
Sbjct: 203 SC 204



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 1/202 (0%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           +C ++    +LH+  +   L  D   S  L+  Y  +  ++    V    + PD   W  
Sbjct: 304 ACGSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTT 363

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
            I     N F E++I L   +       +++ + S L +C+ L  L  G + H   +K G
Sbjct: 364 AISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLG 423

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            D       +++  Y + G +  A+  FD M  RDV SW+S+I  Y  + D S  L++F 
Sbjct: 424 CDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFG 483

Query: 186 SMVR-EGVEPDFVTMLSLAEAC 206
            M    G EPD  + L +  AC
Sbjct: 484 EMRSIRGTEPDESSFLGVLAAC 505



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 62/132 (46%)

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           ++  D    D   K G L  A  +FD M  +N+V+W++ +     +G+   A + F  M+
Sbjct: 26  EVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMV 85

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
            SG+ PN+  F   L AC+ + ++  G+   +     G   D    + +V+L SR GD+ 
Sbjct: 86  ASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLG 145

Query: 653 GAFKMIHSMPFP 664
            A  +   M  P
Sbjct: 146 AAKGVFDRMESP 157


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 185/548 (33%), Positives = 303/548 (55%), Gaps = 14/548 (2%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY---SKCGDLLSAERTFV 255
           +LSL E C  +  L+    IH  +LR  + +D P   S IV +      G L  A   F 
Sbjct: 44  LLSL-EKCTTMSQLK---QIHAQMLRTCLFVD-PFSASKIVAFCALHDSGSLPYARLVFN 98

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +I    T +  ++I  Y      ++A+  +  M+    +P+  T  ++  SC   G L E
Sbjct: 99  QIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCE 155

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +HC   + G   +  Y+   L+  Y+ CG +    KV   +  ++++SW  +I  YA
Sbjct: 156 GKQLHCHSTKLGFASD-AYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 214

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
           +  +  EA++L  +M+   + P+  ++ + L+AC     L+   Q+H ++ +       V
Sbjct: 215 QWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTV 274

Query: 436 -QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
             S+L+D+Y KCG   LA  LF ++ +K++  WN MI G  ++ +  EA++LF++M L+ 
Sbjct: 275 LTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 334

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           ++ D+VT  + + AC+++G LE GKW+H  +    +  D+ + TAL DMYAKCG +++A 
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
           RVF  M E++V++W+A+I    M GQ   A  LF +M  S +KP+ +TF+ +L ACSH+G
Sbjct: 395 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 454

Query: 615 SVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            V EG  YFN+M   +G++P ++HY CMVD+L R+G I  A  +I +MP   +  +   L
Sbjct: 455 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 514

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ CRIH  + V +   ++L      + G Y LLSNIY+   NW+   K+R +M    +K
Sbjct: 515 LSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 574

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 575 KPPGCSAI 582



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 256/497 (51%), Gaps = 12/497 (2%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL--CTYGEFGCLDDARKVFDKMTSR 159
           L  C+++  L   +++H ++++     D    + I+  C   + G L  AR VF+++ + 
Sbjct: 47  LEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNP 103

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
              + +SII  Y +     + +  +  M+ +G++PD  T  SL ++CG LC     + +H
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLH 160

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
            H  +     D  + N+ + MYS CG L+SA + F K+  +   SW  MI  Y +     
Sbjct: 161 CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPH 220

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           +A++ F +M     +PN ITL+ VL +CA    L   K VH  I   G+G  +  L  AL
Sbjct: 221 EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIG-FHTVLTSAL 279

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
           ++ Y +CG       + + + E+N+  WN++I+ +      +EAL L  +MQ  G+  D 
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 339

Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFER 458
            ++AS L AC ++G+L+LG  +H ++ K   + D  + ++L+DMY+KCG    A  +F+ 
Sbjct: 340 VTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 399

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           + +K V+ W ++I G    G  L+A+ LFH+M ++ ++ D +TF+  + ACS+ G + +G
Sbjct: 400 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 459

Query: 519 -KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYG 576
             + +     YG++  I     + DM  + G +  A+ +  +M    +      ++    
Sbjct: 460 IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACR 519

Query: 577 MHGQLNDAASLFKQMLD 593
           +HG L  A    +Q+++
Sbjct: 520 IHGNLVVAERAAQQLIE 536



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 272/566 (48%), Gaps = 43/566 (7%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYA--EMGSLRSSRLVFDTFKEPDSF 61
              CT + +L ++HA +L T L  DP ++++++   A  + GSL  +RLVF+    P +F
Sbjct: 47  LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTF 106

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
               +I+ Y   N   ++IL Y  M+ +      F +PS+ ++C   G L  G+++H   
Sbjct: 107 TCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHS 163

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            K GF  D  IQ +++  Y   GCL  ARKVFDKM ++ VVSW+++I +Y       E +
Sbjct: 164 TKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAI 223

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           K+F  M    V+P+ +T++++  AC     L  A+ +H ++    I     L ++ + +Y
Sbjct: 224 KLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVY 283

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KCG    A   F K+ ++    W  MI+ +     +++AL  F +M     + + +T+ 
Sbjct: 284 CKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 343

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIG 360
           ++L +C  LG L  GK +H  I ++ +  E D  LG AL++ YA+CG +    +V   + 
Sbjct: 344 SLLIACTHLGALELGKWLHVYIEKEKI--EVDVALGTALVDMYAKCGSIESAMRVFQEMP 401

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E+++++W  LI   A  G   +ALEL  +MQ   + PD+ +    L+AC + G +  G+ 
Sbjct: 402 EKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGI- 460

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
                           +    M +K G             Q S+  +  M+    + G  
Sbjct: 461 ----------------AYFNSMPNKYGI------------QPSIEHYGCMVDMLGRAGRI 492

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK-DIYIDTA 539
            EA +L   M    +  D    +  + AC   G L   +    +LI    +    Y+   
Sbjct: 493 AEAEDLIQNMP---MAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYV--L 547

Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNV 565
           L+++Y+   + + A+++ + M ERN+
Sbjct: 548 LSNIYSSMKNWEAAKKMRELMVERNI 573



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 217/461 (47%), Gaps = 40/461 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF+SC  L +  +LH H    G   D      L+  Y+  G L S+R VFD         
Sbjct: 146 LFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVS 205

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           WA +I  Y   +   E+I L+ +M       +     +VL AC+   DL + ++VH  I 
Sbjct: 206 WATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYID 265

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G     V+ ++++  Y + GC   AR +F+KM  +++  W+ +I  + +++D  E L 
Sbjct: 266 ETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALS 325

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F+ M   GV+ D VTM SL  AC  L +L   + +H ++ + KI++D  LG + + MY+
Sbjct: 326 LFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYA 385

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG + SA R F ++ ++   +WTA+I      G   KALE F +M   + +P+ IT + 
Sbjct: 386 KCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVG 445

Query: 303 VLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           VL +C+  G + EG +    +  K G+ P  ++ G  +++     G+++E E +I     
Sbjct: 446 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYG-CMVDMLGRAGRIAEAEDLI----- 499

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
                                        Q   + PD F +   LSAC   G+L +  + 
Sbjct: 500 -----------------------------QNMPMAPDYFVLVGLLSACRIHGNLVVAERA 530

Query: 422 HGHVIKIDCKDEFVQSSLIDMYSKC----GFKNLAYLLFER 458
              +I++D K+      L ++YS        K +  L+ ER
Sbjct: 531 AQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 571


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 197/649 (30%), Positives = 330/649 (50%), Gaps = 25/649 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +  +L  C+   DL  G+ +H ++++ G      +  S++  Y + G +  A+ VF+ +T
Sbjct: 13  FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT 72

Query: 158 SRDVVSWSSIIASYFDNADV--SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           ++DVVSW+ +I  Y     V  S  +++F  M  E   P+  T   +  A          
Sbjct: 73  NKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
              H   ++     D  +G+S I MY K G +L A + F  I +R T SW  +IS Y   
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
               +A E F+ M   +   +     +VL +      +  GK +HC  ++ G+      +
Sbjct: 193 RMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGL-LSIASV 251

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
           G AL+  Y +CG + +  K     G+++ ++W+ +I+ YA+ G S EAL L   M   G 
Sbjct: 252 GNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNLAY 453
            P  F+    ++AC ++G+L+ G QIHG+ +K   +C+  F +     + +KCG    A 
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYF-RKGFDYLKAKCGSLVDAR 370

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
             F+ +++  +V+W S                   +M +  +   E+T  + ++ACS++ 
Sbjct: 371 KGFDYLKEPDIVLWTSC------------------RMQMERIMPHELTMASVLRACSSLA 412

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            LE+GK +H + I YG   ++ I +AL+ MYAKCG L+    VF  M  R++++W+AMI 
Sbjct: 413 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 472

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVE 632
               +G+   A  LF+++     KP+ VTF+N+L ACSH G VE GK YF  M   FG+ 
Sbjct: 473 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGII 532

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P ++HYACMVD+LSR+G +    + I S        +W  LL  CR ++  ++     ++
Sbjct: 533 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 592

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L   G+ ++  Y LLS+IY   G  D+  +VR +M++ G+ K PG S I
Sbjct: 593 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWI 641



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 169/576 (29%), Positives = 270/576 (46%), Gaps = 46/576 (7%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   CT   +L+K   +HA LL TG       +  L+  YA+ GS+  ++LVF++    D
Sbjct: 16  LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75

Query: 60  SFMWAVLIKCYMWNNFFEESIL--LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
              W  LI  Y        S +  L+ +M  E    +   +  V  A SS  +   G + 
Sbjct: 76  VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   IK     D  + +S++  Y + GC+ DARKVFD +  R+ VSW++II+ Y      
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E  ++F  M RE    D     S+  A      +   + IH   L+  +     +GN+ 
Sbjct: 196 FEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCG L  A +TF     +   +W+AMI+ Y ++G   +AL  F  M     +P+ 
Sbjct: 256 VTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSE 315

Query: 298 ITLITVLGSCAGLGWLREGKSVH---------CQI-IRKGMGPEYDYLGPALIEFYAECG 347
            T + V+ +C+ +G L EGK +H         CQI  RKG    +DYL        A+CG
Sbjct: 316 FTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKG----FDYLK-------AKCG 364

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            + +  K    + E +I+ W                     +MQ   +MP   ++AS L 
Sbjct: 365 SLVDARKGFDYLKEPDIVLWTS------------------CRMQMERIMPHELTMASVLR 406

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC ++ +L+ G QIH   IK     E  + S+L  MY+KCG      L+F R+  + ++ 
Sbjct: 407 ACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMT 466

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKL 525
           WN+MI G  QNG  L+A+ LF ++     + D VTF+  + ACS++G +E+GK +    L
Sbjct: 467 WNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMML 526

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
             +G+   +     + D+ ++ G L   +   +S +
Sbjct: 527 DEFGIIPRVEHYACMVDILSRAGKLHETKEFIESAT 562



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 173/329 (52%), Gaps = 4/329 (1%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P   + + +L  C     L++GK++H Q++R G      YL  +L+  YA+CG + + + 
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSV-YLTNSLVNLYAKCGSIVKAKL 66

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEA--LELLVQMQTWGLMPDSFSVASSLSACGNV 412
           V  +I  ++++SWN LI+ Y++KG    +  +EL  +M+    +P+  + +   +A  + 
Sbjct: 67  VFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSS 126

Query: 413 GSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
                GLQ H   IK  +  D FV SSLI+MY K G    A  +F+ I +++ V W ++I
Sbjct: 127 PETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G+     + EA  LF  M       D+  + + + A +    +  GK +H   +  G+ 
Sbjct: 187 SGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLL 246

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
               +  AL  MY KCG L  A + F+   +++ ++WSAMI  Y   G  ++A +LF  M
Sbjct: 247 SIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM 306

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGK 620
             +G KP+E TF+ ++ ACS  G++EEGK
Sbjct: 307 HLNGNKPSEFTFVGVINACSDIGALEEGK 335



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 25/200 (12%)

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M L  L     +F+  +  C+    L+KGK +H +L+  G    +Y+  +L ++YAKCG 
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA--ASLFKQMLDSGIKPNEVTFMNIL 607
           +  A+ VF+S++ ++VVSW+ +I+ Y   G +  +    LF++M      PN  TF  + 
Sbjct: 61  IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120

Query: 608 WACS-----------HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
            A S           H+ +++   FY           D+   + ++++  + G +  A K
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFY-----------DVFVGSSLINMYCKIGCMLDARK 169

Query: 657 MIHSMPFPANGSIWGALLNG 676
           +  ++P   N   W  +++G
Sbjct: 170 VFDTIP-ERNTVSWATIISG 188


>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 183/570 (32%), Positives = 318/570 (55%), Gaps = 41/570 (7%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS--KCGDLLSAERTFVKIEKRCTTSWTAM 268
           S++  + I   +LR      G   N F+V  +    G+L  AER F  I+      +  +
Sbjct: 44  SMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLV 103

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I  + ++G F+KA+  F ++ E    P+  T   V  +   LG +REG+ V+  +++ G+
Sbjct: 104 IKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGL 163

Query: 329 GPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
             E+D Y+  +L++ YAE G++    +V   + +R+++SWN+LIS Y +    ++A+++ 
Sbjct: 164 --EFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVF 221

Query: 388 VQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKC 446
            +MQ    L P+  +V S+LSAC  +  L+LG +IH +V +       + ++L+DMY KC
Sbjct: 222 RRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKC 281

Query: 447 GFKNLA---------------------YL----------LFERIQQKSVVMWNSMICGFY 475
           G  ++A                     Y+          LFER   + VV+W +MI G+ 
Sbjct: 282 GHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYV 341

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           Q     +A+ LF +M +  +  D  T +  +  C+ +G LE+GKW+H  +    +  D  
Sbjct: 342 QFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAV 401

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           + TAL +MYAKCG ++ +  +F+ + E++  SW+++I    M+G+ + A  LF +M+ +G
Sbjct: 402 VGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTG 461

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGA 654
           +KP+++TF+ +L ACSH G VEEG+ +F +M  ++ +EP L+HY C++DLL R+G ++ A
Sbjct: 462 VKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEA 521

Query: 655 FKMIHSMPFPANGSI---WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIY 711
            ++I   P   N  I   +GALL+ CR H  +++ + + K L    + D+  +TLL+NIY
Sbjct: 522 EELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIY 581

Query: 712 AEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           A    W++  KVR  M+  G+KKVPG S++
Sbjct: 582 ASADRWEDVTKVRRKMKDLGVKKVPGCSSV 611



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 167/646 (25%), Positives = 293/646 (45%), Gaps = 90/646 (13%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEPDS 60
           L ++C +++ L ++   +L TG H       + +   +   +G+L  +  +F+    P  
Sbjct: 38  LLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGL 97

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           F++ ++IK +  N  F +++LL+ ++  E  +  NF YP V +A   LG++  GEKV+G 
Sbjct: 98  FIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGF 157

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K G + D  +  S++  Y E G + + R+VF++M  RDVVSW+ +I+ Y       + 
Sbjct: 158 VVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDA 217

Query: 181 LKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           + +F  M ++  + P+  T++S   AC  L  L   + IH +V R ++     +GN+ + 
Sbjct: 218 VDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIGNALVD 276

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF-------------- 285
           MY KCG L  A   F  +  +    WT+M+S Y   G   +A E F              
Sbjct: 277 MYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAM 336

Query: 286 ----------------VKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
                            + +++K   P+  TL+ +L  CA LG L +GK +H  I    +
Sbjct: 337 INGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKI 396

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             +   +G ALIE YA+CG + +  ++ + + E++  SW  +I   A  G + +ALEL  
Sbjct: 397 MIDA-VVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFA 455

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYSK 445
           +M   G+ PD  +    LSAC + G ++ G    +    V +I+ K E     LID+  +
Sbjct: 456 EMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHY-GCLIDLLGR 514

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
            G  + A    E + +KS  + N +I   Y                              
Sbjct: 515 AGQLDEA----EELIEKSPNVNNEVIVPLYG---------------------------AL 543

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRK-DIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
           + AC   G +E G+ V  +L+  G+   D  + T L ++YA     +   +V   M +  
Sbjct: 544 LSACRTHGNVEMGERVAKRLV--GIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLG 601

Query: 565 V--VSWSAMIDCYGM----------HGQLNDAASLFKQMLDSGIKP 598
           V  V   + ++  G+          H ++ +  S    MLDS  KP
Sbjct: 602 VKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYS----MLDSIAKP 643


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 222/760 (29%), Positives = 382/760 (50%), Gaps = 27/760 (3%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEM-------GSLRSSRLVFDTFK 56
            R+C  L     L   + + GL    P ++ ++ S   M        S+  +R VF+  K
Sbjct: 147 LRACQELGP-NMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIK 205

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS----NFIYPSVLRACSSLGDLG 112
              S  W  +I  Y        +  L+  M RE   ++     + + S++    SL D G
Sbjct: 206 MKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCG 265

Query: 113 SG--EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
               E++  RI K  F KD  + ++++  +  +G +D A+ +F++M  R+ V+ + ++  
Sbjct: 266 LTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVG 325

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL----RPARSIHGHVLRRK 226
                   E  K+F  M ++ VE +  +   L  A  E  +L    R  + +H +++R  
Sbjct: 326 LARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNA 384

Query: 227 -IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
            + +   +GN+ + +Y+KC  + +A   F  +  + T SW ++IS  + +  F++A+  F
Sbjct: 385 LVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACF 444

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
             M      P+  ++I+ L SCA LGW+  G+ +H + I+ G+  +   +  AL+  YAE
Sbjct: 445 HTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS-VSNALLTLYAE 503

Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK-EALELLVQMQTWGLMPDSFSVAS 404
              M E +KV   + E + +SWN  I   A    S  +A++  ++M   G  P+  +  +
Sbjct: 504 TDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFIN 563

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERI-QQK 462
            LSA  ++  L+LG QIH  ++K    D+  ++++L+  Y KC       ++F R+ +++
Sbjct: 564 ILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERR 623

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
             V WN+MI G+  NG   +A+ L   M      +D+ T  T + AC+++  LE+G  VH
Sbjct: 624 DEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVH 683

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
              I   +  ++ + +AL DMYAKCG +  A R F+ M  RN+ SW++MI  Y  HG   
Sbjct: 684 ACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGG 743

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
            A  LF QM   G  P+ VTF+ +L ACSH G V+EG  +F +M  ++ + P ++H++CM
Sbjct: 744 KALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCM 803

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHKR-IDVMKTIEKELSVTGTN 699
           VDLL R+GD++   + I +MP   N  IW  +L   CR + R  ++ +   K L      
Sbjct: 804 VDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPL 863

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +   Y LLSN++A  G W++  + R  M    +KK  G S
Sbjct: 864 NAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCS 903



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 187/694 (26%), Positives = 333/694 (47%), Gaps = 20/694 (2%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           +R    +    +LH  +  TGL  D      L+  +   G+L S++ +FD   + +   W
Sbjct: 49  YRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSW 108

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD--LGSGEKVHGRI 121
           + L+  Y  N   +E+ +L+  +I      +++   S LRAC  LG   L  G ++HG I
Sbjct: 109 SCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLI 168

Query: 122 IKCGFDKDDVIQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            K  +  D V+   ++  Y      +DDAR+VF+++  +   SW+SII+ Y    D    
Sbjct: 169 SKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISA 228

Query: 181 LKMFHSMVREGVE----PDFVTMLSLAEACGEL--CSLRPARSIHGHVLRRKIKIDGPLG 234
            K+F SM RE  E    P+  T  SL      L  C L     +   + +     D  +G
Sbjct: 229 FKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVG 288

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ +  +++ G + SA+  F +++ R   +   ++    R    ++A + F +M ++  E
Sbjct: 289 SALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLV-E 347

Query: 295 PNLITLITVLGSCAGLGWLREGK----SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
            N  +   +L +      L+EGK     VH  +IR  +   +  +G AL+  YA+C  + 
Sbjct: 348 INASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAID 407

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               +   +  ++ +SWN +IS        +EA+     M+  G++P  FSV S+LS+C 
Sbjct: 408 NARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCA 467

Query: 411 NVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           ++G + LG QIHG  IK     D  V ++L+ +Y++         +F  + +   V WNS
Sbjct: 468 SLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNS 527

Query: 470 MICGFYQNGNS-LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
            I     +  S L+AI  F +M     + + VTF+  + A S++  LE G+ +H  ++ +
Sbjct: 528 FIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKH 587

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASL 587
            V  D  I+  L   Y KC  ++  + +F  MSE R+ VSW+AMI  Y  +G L+ A  L
Sbjct: 588 SVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGL 647

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLS 646
              M+  G + ++ T   +L AC+   ++E G + +  A+R   +E ++   + +VD+ +
Sbjct: 648 VWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC-LEAEVVVGSALVDMYA 706

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           + G I+ A +    MP   N   W ++++G   H
Sbjct: 707 KCGKIDYASRFFELMPVR-NIYSWNSMISGYARH 739



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 200/398 (50%), Gaps = 40/398 (10%)

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           + +   +H QI + G+  +  +    L+  +   G +   +K+   + ++N++SW+ L+S
Sbjct: 55  VEDAHQLHLQIYKTGLTSDV-FWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS--LQLGLQIHGHVIKIDC 430
            YA+ GM  EA  L   + + GL+P+ +++ S+L AC  +G   L+LG++IHG + K   
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173

Query: 431 KDEFVQSS-LIDMYSKCGFK-NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             + V S+ L+ MYS C    + A  +FE I+ K+   WNS+I  + + G+++ A  LF 
Sbjct: 174 ASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFS 233

Query: 489 QMY-----LNCLEMDEVTFLTAIQ-ACSNI-----------GQLEKGKWVHHKLISYGVR 531
            M      LNC   +E TF + +  ACS +            ++EK  +V          
Sbjct: 234 SMQREATELNC-RPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFV---------- 282

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           KD+Y+ +AL   +A+ G + +A+ +F+ M +RN V+ + ++       Q  +AA +FK+M
Sbjct: 283 KDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM 342

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY-----ACMVDLLS 646
            D  ++ N  ++  +L A +   +++EGK     +  + +   L          +V+L +
Sbjct: 343 KDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYA 401

Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           +   I+ A  +   MP     S W ++++G   ++R +
Sbjct: 402 KCNAIDNARSIFQLMPSKDTVS-WNSIISGLDHNERFE 438


>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
          Length = 697

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 182/605 (30%), Positives = 322/605 (53%), Gaps = 10/605 (1%)

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE--GVEPDFVTMLS 201
           G L  AR+VFDKM  RD+ SW++I+  Y       E L +F +M  +  GV  D   +  
Sbjct: 42  GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
             +ACG+  ++    S+H +  +  +     +G++ + MY + G +  + R F ++  R 
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVH 320
           + +WTA I+    +G   + L  F +M   K+   +       L +CA L  ++ G+ +H
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
             +I KG      ++  +L   Y ECG+M +  ++  ++ ER+++ W  LI+ Y R G  
Sbjct: 222 THVIVKGFAAIL-WVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQE 280

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSL 439
           ++A+   + M+   + P+  + AS+ +AC ++  L  G Q+HG+V  +   D   V +S+
Sbjct: 281 EKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSM 340

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           + MYS C   + A +LF+ ++ + ++ W+++I G+ Q     E    F  M     +  +
Sbjct: 341 MKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTD 400

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
               + +     +  LE+G+ VH   +  G+ ++  I +AL +MY+KCG +  A +VF+ 
Sbjct: 401 FALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEE 460

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
               ++VS +AMI+ Y  HG+  +A  LF++ L    +P++VTF+++L ACSHSG ++ G
Sbjct: 461 KDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLG 520

Query: 620 KFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
             YFN M+  + + P  +HY CMVDLL R+G +  A KMI+ MP+  +  +W  LL  C+
Sbjct: 521 FQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACK 580

Query: 679 IHKRIDVMKTIEKELSVTGTNDNGYYTL--LSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
             ++ DV +       +   +   + TL  L+NI++  GNW E   VR  M+  G+ K P
Sbjct: 581 --EKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKEP 638

Query: 737 GYSTI 741
           G+S+I
Sbjct: 639 GWSSI 643



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 289/613 (47%), Gaps = 40/613 (6%)

Query: 25  LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYH 84
           +H +   +   ++   + G LR +R VFD     D   W  ++K Y+     EE+++L+ 
Sbjct: 24  MHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFS 83

Query: 85  KMIREQATIS--NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
            M  +   +S   ++    L+AC    ++  GE +H    K        + +++L  Y  
Sbjct: 84  AMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMR 143

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLS 201
            G +D + +VF +M  R+ V+W++ I          EGL+ F  M R + +  D      
Sbjct: 144 IGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAI 203

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
             +AC +L  ++  R IH HV+ +       + NS   MY++CG++    R F  + +R 
Sbjct: 204 ALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERD 263

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
              WT++I+ Y R G  +KA+ +F+ M   +  PN  T  +   +CA L  L  G+ +H 
Sbjct: 264 VVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHG 323

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            +   G+G     +  ++++ Y+ C K+     +   +  R+I+SW+ +I  Y++    +
Sbjct: 324 NVFSLGLGDSLS-VSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGE 382

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLI 440
           E  +    M+  G  P  F++AS LS  G +  L+ G Q+H   + +   ++  ++S+LI
Sbjct: 383 ECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALI 442

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           +MYSKCG    A  +FE   +  +V   +MI G+ ++G   EAI+LF +        D+V
Sbjct: 443 NMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDV 502

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           TF++ + ACS+ GQL+ G         + + ++ Y             +++ A+  +  M
Sbjct: 503 TFISVLTACSHSGQLDLG------FQYFNLMQENY-------------NMRPAKEHYGCM 543

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
                      +D     G+LNDA  +  +M     K ++V +  +L AC   G VE G+
Sbjct: 544 -----------VDLLCRAGRLNDAEKMINEM---PWKKDDVVWTTLLRACKEKGDVERGR 589

Query: 621 FYFNAMRIFGVEP 633
               A RI  ++P
Sbjct: 590 --RAAQRILELDP 600



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 232/527 (44%), Gaps = 16/527 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LHA+   T L       + L++ Y  +G +  S  VF      +S  W   I   +    
Sbjct: 118 LHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGL 177

Query: 76  FEESILLYHKMIR-EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             E +  + +M R +Q +   F +   L+AC+ L  +  G ++H  +I  GF     +  
Sbjct: 178 HYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVAN 237

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S+   Y E G + D  ++F+ M+ RDVV W+S+I +Y       + +  F  M    V P
Sbjct: 238 SLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSP 297

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           +  T  S   AC  L  L     +HG+V    +     + NS + MYS C  L SA   F
Sbjct: 298 NEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLF 357

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
             +  R   SW+ +I  Y+++ + ++  + F  M +   +P    L ++L     +  L 
Sbjct: 358 QGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLE 417

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
           +G+ VH   +  G+  +   +  ALI  Y++CG + E  KV       +I+S   +I+ Y
Sbjct: 418 QGRQVHALALYLGL-EQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGY 476

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ----IHGHVIKIDC 430
           A  G  +EA++L  +       PD  +  S L+AC + G L LG Q    +  +      
Sbjct: 477 AEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPA 536

Query: 431 KDEFVQSSLIDMYSKCGFKNLA-YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
           K+ +    ++D+  + G  N A  ++ E   +K  V+W +++    + G+    +    +
Sbjct: 537 KEHY--GCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGD----VERGRR 590

Query: 490 MYLNCLEMDEVTFLTAIQAC---SNIGQLEKGKWVHHKLISYGVRKD 533
                LE+D  +F T +      S+ G  ++   V   + S GV K+
Sbjct: 591 AAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKE 637



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 200/420 (47%), Gaps = 18/420 (4%)

Query: 4   FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            ++C +LR++     +H H++V G       +  L   Y E G ++    +F++  E D 
Sbjct: 205 LKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDV 264

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            +W  LI  Y+     E+++  +  M   Q + +   + S   AC+SL  L  GE++HG 
Sbjct: 265 VLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGN 324

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +   G      +  S++  Y     LD A  +F  M  RD++SWS+II  Y   A   E 
Sbjct: 325 VFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEEC 384

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            K F  M + G +P    + SL    G +  L   R +H   L   ++ +  + ++ I M
Sbjct: 385 FKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINM 444

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           YSKCG ++ A + F + ++    S TAMI+ Y   G  ++A++ F K L++   P+ +T 
Sbjct: 445 YSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTF 504

Query: 301 ITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           I+VL +C+  G L  G +  +       M P  ++ G  +++     G++++ EK+I+ +
Sbjct: 505 ISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYG-CMVDLLCRAGRLNDAEKMINEM 563

Query: 360 G-ERNILSWNMLISEYARKG---MSKEALELLVQMQTWGLMPDSFSVASSL----SACGN 411
             +++ + W  L+     KG     + A + ++++      P SF+   +L    S+ GN
Sbjct: 564 PWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELD-----PTSFTTLVTLANIHSSTGN 618


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 288/479 (60%), Gaps = 5/479 (1%)

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W  ++S ++R+G    AL  F + L     PN  T    L +CA LG L   +SV  +  
Sbjct: 76  WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
             G G +  ++  AL+  Y+ CG M E  +V   +  ++ ++W+ +++ +   G   EAL
Sbjct: 135 AAGYGHDV-FVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEAL 193

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
            +  +M+  G+  D   +   + AC + G+ ++G  +HG +++   + D    +SL+ MY
Sbjct: 194 AMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMY 253

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           +K G  ++A  +F  +  ++ V W+++I GF QNG ++EA++LF ++  + L+      +
Sbjct: 254 AKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALV 313

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
           +A+ AC+++G L+ GK +H   I   +     + TA+ DMY+KCG L++A+++F+ +S R
Sbjct: 314 SALLACASVGFLKLGKSIH-GFILRRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSR 372

Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYF 623
           ++V W+A+I C G HG  +DA +LF+++ ++GIKP+  TF ++L A SHSG VEEGKF+F
Sbjct: 373 DLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWF 432

Query: 624 NAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           + M + FG+EP  +HY C+VDLL+RSG +E A  M+ SM      +IW  LL+GC  +K+
Sbjct: 433 DRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKK 492

Query: 683 IDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +++ +TI K++      D G   L+SN+YA    WD+  ++R +M+ +G KKVPGYS I
Sbjct: 493 LELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 551



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 235/480 (48%), Gaps = 11/480 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  S T L  LTRLHA L+V+   +   +          + +  S+ L            
Sbjct: 17  LSSSRTTLATLTRLHALLVVSSSQHILSSLAAAYARAGALDAAEST-LAASPSSPSSIAA 75

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L+  +        ++ ++ + +   A  ++  +   L AC+ LGDL + E V  R  
Sbjct: 76  WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
             G+  D  + +++L  Y   G +++A +VFD M  +D V+WS+++A +       E L 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           M+  M   GV  D V M+ + +AC    + R   S+HG +LR  +++D     S + MY+
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           K G L  A + F  +  R   +W+A+IS + ++G   +AL+ F ++     +P    L++
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGE 361
            L +CA +G+L+ GKS+H  I+R+    E+   LG A+++ Y++CG +    K+ + +  
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR---LEWQCILGTAVLDMYSKCGSLESARKLFNKLSS 371

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R+++ WN +I+     G   +AL L  ++   G+ PD  + AS LSA  + G ++ G   
Sbjct: 372 RDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 431

Query: 422 HGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQN 477
              +IK   I+  ++     ++D+ ++ G    A  +   +Q + ++ +W  ++ G   N
Sbjct: 432 FDRMIKEFGIEPAEKHY-VCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNN 490


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 180/611 (29%), Positives = 318/611 (52%), Gaps = 7/611 (1%)

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++ ++   G + DA       +S D    + +I  + D       L  + +M+  G  P
Sbjct: 48  SLVLSHAAAGRMHDALAAVR--SSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARP 105

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERT 253
           D  T   + + C  L +L   R+ H   +R   +  +   GNS +  Y+K G +  AER 
Sbjct: 106 DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERV 165

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-VKEEPNLITLITVLGSCAGLGW 312
           F  +  R   +W +M+  Y  +G    AL+ F +M E ++ + + + +I  L +C     
Sbjct: 166 FDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSA 225

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           L +G+ VH  +IR G+  +   +G +L++ Y +CG ++  E +   +  R +++WN +I 
Sbjct: 226 LMQGREVHAYVIRHGLEQDVK-VGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIG 284

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            YA  G  +EA +  VQM+  G   +  +  + L+AC    S   G  +HG+V +     
Sbjct: 285 GYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLP 344

Query: 433 EFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
             V +++L++MYSK G    +  +F ++  K++V WN+MI  +       EAI LF ++ 
Sbjct: 345 HVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELL 404

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
              L  D  T    + A   +G L + + +H  ++     ++  +  A+  MYA+CGD+ 
Sbjct: 405 NQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVV 464

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           +++++FD M+ ++V+SW+ +I  Y +HGQ   A  +F +M  +G++PNE TF+++L ACS
Sbjct: 465 SSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACS 524

Query: 612 HSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
            SG  +EG   FN M R +G+ P ++HY CM DLL R+GD+    K I S+P      IW
Sbjct: 525 VSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIW 584

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
           G+LL   R    ID+ +   + +     ++ G Y +LS++YA+ G W++  ++RS M   
Sbjct: 585 GSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEK 644

Query: 731 GLKKVPGYSTI 741
           GL++    S +
Sbjct: 645 GLRRTDARSIV 655



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 6/382 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM---IREQA 91
           L+  YA++G +  +  VFD     D   W  ++  Y+ N     ++  + +M   ++ Q 
Sbjct: 149 LLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQH 208

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
                I  + L AC     L  G +VH  +I+ G ++D  + TS+L  Y + G +  A  
Sbjct: 209 DGVGII--AALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEG 266

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +F  M SR VV+W+ +I  Y  N    E    F  M  EG + + VT ++L  AC +  S
Sbjct: 267 MFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTES 326

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
               RS+HG+V R +      L  + + MYSK G + S+E  F ++  +   SW  MI+ 
Sbjct: 327 SLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAA 386

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y     + +A+  F+++L     P+  T+  V+ +   LG LR+ + +H  I+R   G E
Sbjct: 387 YMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYG-E 445

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +  A++  YA CG +    K+   +  ++++SWN +I  YA  G  K ALE+  +M+
Sbjct: 446 NTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMK 505

Query: 392 TWGLMPDSFSVASSLSACGNVG 413
           + GL P+  +  S L+AC   G
Sbjct: 506 SNGLQPNESTFVSVLTACSVSG 527



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 174/346 (50%), Gaps = 4/346 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA+++  GL  D    T L++ Y + G++ S+  +F T        W  +I  Y  N  
Sbjct: 232 VHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGC 291

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE+   + +M  E   +      ++L AC+       G  VHG + +  F    V++T+
Sbjct: 292 PEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETA 351

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y + G +  +  +F +MT++ +VSW+++IA+Y      +E + +F  ++ + + PD
Sbjct: 352 LLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPD 411

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           + TM ++  A   L  LR  R +H +++R     +  + N+ + MY++CGD++S+ + F 
Sbjct: 412 YFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFD 471

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+  +   SW  +I  Y   G  + ALE F +M     +PN  T ++VL +C+  G   E
Sbjct: 472 KMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADE 531

Query: 316 GKSVHCQIIRKGMG--PEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           G  +   ++++  G  P+ ++ G  + +     G + E  K I +I
Sbjct: 532 GW-IQFNLMQRDYGIIPQIEHYG-CMTDLLGRAGDLREVLKFIESI 575


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 173/542 (31%), Positives = 297/542 (54%), Gaps = 36/542 (6%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           N+ +  YSK G +   E  F  + +R   SW ++IS Y   G   ++++++  ML+    
Sbjct: 79  NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138

Query: 295 PNL--ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE------- 345
            NL  IT  T+L   +  G ++ G+ +H  +++ G    Y ++G  L++ Y++       
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGF-MSYVFVGSPLVDMYSKMGMISCA 197

Query: 346 ------------------------CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
                                   CG++ + +++   + ER+ +SW  +I+ + + G+ +
Sbjct: 198 RKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDR 257

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLI 440
           +A+++  +M+   L  D ++  S L+ACG V +LQ G Q+H ++I+ D KD  FV S+L+
Sbjct: 258 DAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALV 317

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMY KC     A  +F+++  K+VV W +M+ G+ QNG S EA+  F  M    +E D+ 
Sbjct: 318 DMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDF 377

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T  + I +C+N+  LE+G   H + ++ G+   I +  AL  +Y KCG ++ + R+F+ +
Sbjct: 378 TLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI 437

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           S ++ V+W+A++  Y   G+ N+   LF+ ML  G+KP++VTF+ +L ACS +G VE+G 
Sbjct: 438 SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGN 497

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
             F +M    G+ P   HY CM+DL SR+G IE A   I+ MPF  +   W  LL+ CR 
Sbjct: 498 QIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRF 557

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +  +D+ K   + L     ++   Y LLS++YA +G W+E  ++R  M   GL+K PG S
Sbjct: 558 YGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCS 617

Query: 740 TI 741
            I
Sbjct: 618 WI 619



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 270/559 (48%), Gaps = 82/559 (14%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++L+ C    +    + +H  IIK     +  +  +++ +Y + G +  A KVFD+M 
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REGVEPD--------------------- 195
             ++ SW++I+++Y     VSE   +F +M  R+GV  +                     
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 196 --------------FVTMLSLAEACGELCSLRPARSIHGHVLR----------------- 224
                         F T+L LA   G    ++  R IHGHV++                 
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRG---CVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY 188

Query: 225 ---------RKIKIDGPLGNSFIVMYS-------KCGDLLSAERTFVKIEKRCTTSWTAM 268
                    RK+  + P  N  +VMY+       +CG +  ++R F ++ +R + SWT+M
Sbjct: 189 SKMGMISCARKVFDELPEKN--VVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 246

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           I+ + ++G  + A++ F +M     + +  T  +VL +C G+  L+EGK VH  IIR   
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 306

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
                ++  AL++ Y +C  +   E V   +  +N++SW  ++  Y + G S+EA++   
Sbjct: 307 KDNI-FVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCG 447
            MQ +G+ PD F++ S +S+C N+ SL+ G Q H   +         V ++L+ +Y KCG
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               ++ LF  I  K  V W +++ G+ Q G + E I LF  M  + L+ D+VTF+  + 
Sbjct: 426 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485

Query: 508 ACSNIGQLEKGKWVHHKLIS-YGVR--KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ER 563
           ACS  G +EKG  +   +I+ +G+   +D Y  T + D++++ G ++ A+   + M    
Sbjct: 486 ACSRAGLVEKGNQIFESMINEHGIVPIQDHY--TCMIDLFSRAGRIEEARNFINKMPFSP 543

Query: 564 NVVSWSAMIDCYGMHGQLN 582
           + +SW+ ++     +G ++
Sbjct: 544 DAISWATLLSSCRFYGNMD 562



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/657 (23%), Positives = 280/657 (42%), Gaps = 137/657 (20%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           N  K   LH+H++ T  + +      LI SYA++GS+  +  VFD    P+ + W  ++ 
Sbjct: 24  NFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILS 83

Query: 69  CYM----------------------WNNFFE---------ESILLYHKMIREQAT--ISN 95
            Y                       WN+            +S+  Y+ M++   +  ++ 
Sbjct: 84  AYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNR 143

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD- 154
             + ++L   S  G +  G ++HG ++K GF     + + ++  Y + G +  ARKVFD 
Sbjct: 144 ITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDE 203

Query: 155 ------------------------------KMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
                                         +M  RD +SW+S+I  +  N    + + +F
Sbjct: 204 LPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 263

Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
             M  E ++ D  T  S+  ACG + +L+  + +H +++R   K +  + ++ + MY KC
Sbjct: 264 REMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKC 323

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
            ++ SAE  F K+  +   SWTAM+  Y ++G+ ++A+++F  M +   EP+  TL +V+
Sbjct: 324 KNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVI 383

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            SCA L  L EG   H + +  G+   +  +  AL+  Y +CG + +  ++ + I  ++ 
Sbjct: 384 SSCANLASLEEGAQFHARALTSGL-ISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDE 442

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           ++W  L+S YA+ G + E + L   M   GL PD  +    LSAC   G ++ G QI   
Sbjct: 443 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFES 502

Query: 425 VIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           +I     +  +D +  + +ID++S+ G          RI+                    
Sbjct: 503 MINEHGIVPIQDHY--TCMIDLFSRAG----------RIE-------------------- 530

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            EA N  ++M  +    D +++ T + +C   G ++ GKW    L+              
Sbjct: 531 -EARNFINKMPFS---PDAISWATLLSSCRFYGNMDIGKWAAEFLM-------------- 572

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
                              +   N  S+  +   Y   G+  + A L K M D G++
Sbjct: 573 ------------------ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLR 611



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 223/435 (51%), Gaps = 44/435 (10%)

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           F KA      +++    P    L  ++ S A LG +       C++  +   P   Y   
Sbjct: 25  FTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYA----CKVFDQMPHPNL-YSWN 79

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM---SKEALELLVQMQ-TW 393
            ++  Y++ G++SE E +  A+  R+ +SWN LIS YA  G+   S +A  L+++   ++
Sbjct: 80  TILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSF 139

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLA 452
            L   +FS    L++    G ++LG QIHGHV+K       FV S L+DMYSK G  + A
Sbjct: 140 NLNRITFSTLLILAS--KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCA 197

Query: 453 YLLFERIQQKSVVM-------------------------------WNSMICGFYQNGNSL 481
             +F+ + +K+VVM                               W SMI GF QNG   
Sbjct: 198 RKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDR 257

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           +AI++F +M L  L+MD+ TF + + AC  +  L++GK VH  +I    + +I++ +AL 
Sbjct: 258 DAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALV 317

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           DMY KC ++++A+ VF  M+ +NVVSW+AM+  YG +G   +A   F  M   GI+P++ 
Sbjct: 318 DMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDF 377

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           T  +++ +C++  S+EEG  +       G+   +     +V L  + G IE + ++ + +
Sbjct: 378 TLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI 437

Query: 662 PFPANGSIWGALLNG 676
            F  +   W AL++G
Sbjct: 438 SF-KDEVTWTALVSG 451



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 144/336 (42%), Gaps = 66/336 (19%)

Query: 406 LSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCG--------FKNLAY--- 453
           L  C    +      +H H+IK +   + F+ ++LI  Y+K G        F  + +   
Sbjct: 16  LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNL 75

Query: 454 --------------------LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
                                LF+ + ++  V WNS+I G+   G   +++  ++ M  N
Sbjct: 76  YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 135

Query: 494 --CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
                ++ +TF T +   S  G ++ G+ +H  ++ +G    +++ + L DMY+K G + 
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195

Query: 552 TAQRVFDSMSERNVV-------------------------------SWSAMIDCYGMHGQ 580
            A++VFD + E+NVV                               SW++MI  +  +G 
Sbjct: 196 CARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGL 255

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
             DA  +F++M    ++ ++ TF ++L AC    +++EGK     +     + ++   + 
Sbjct: 256 DRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASA 315

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +VD+  +  +I+ A  +   M    N   W A+L G
Sbjct: 316 LVDMYCKCKNIKSAEAVFKKMTC-KNVVSWTAMLVG 350



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 89/240 (37%), Gaps = 44/240 (18%)

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++ C       K K +H  +I      + ++   L   YAK G +  A +VFD M   N+
Sbjct: 16  LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNL 75

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQML--------------------------------- 592
            SW+ ++  Y   G++++   LF  M                                  
Sbjct: 76  YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 135

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
           D     N +TF  +L   S  G V+ G+     +  FG    +   + +VD+ S+ G I 
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS----------VTGTNDNG 702
            A K+   +P   N  ++  L+ G     R++  K +  E+           +TG   NG
Sbjct: 196 CARKVFDELP-EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254


>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 170/469 (36%), Positives = 268/469 (57%), Gaps = 6/469 (1%)

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           +  AL  F +M+ +   P+  T      SCA L  L    + H  + +  +  +  +   
Sbjct: 103 YPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSD-PHTAH 161

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLM 396
           +LI  YA CG ++   KV   I  R+ +SWN +I+ YA+ G ++EA+E+  +M +  G  
Sbjct: 162 SLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFE 221

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLL 455
           PD  S+ S L ACG +G L+LG  + G V++     + ++ S+LI MY+KCG    A  +
Sbjct: 222 PDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRI 281

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ +  + V+ WN++I G+ QNG + EAI LFH M  +C+  +++T    + AC+ IG L
Sbjct: 282 FDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGAL 341

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + GK +       G + DI++ TAL DMYAK G L  AQRVF  M ++N  SW+AMI   
Sbjct: 342 DLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISAL 401

Query: 576 GMHGQLNDAASLFKQMLDS--GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVE 632
             HG+  +A SLF+ M D   G +PN++TF+ +L AC H+G V+EG   F+ M  +FG+ 
Sbjct: 402 AAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLV 461

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P ++HY+CMVDLL+R+G +  A+ +I  MP   +    GALL  CR  K +D+ + + + 
Sbjct: 462 PKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRM 521

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +     +++G Y + S IYA    W++  ++R +M   G+ K PG S I
Sbjct: 522 ILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWI 570



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 241/474 (50%), Gaps = 24/474 (5%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEPDSF 61
           L + C++ + L ++H  ++V    + P  +  L+     + +   S L+F      P+ +
Sbjct: 30  LAKQCSSTKTLQQVHTQMVVNSSIHTP--NNHLLSKAIHLKNFPYSSLLFSHIAPHPNDY 87

Query: 62  MWAVLIKCYM--WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + ++I+     W+N+   ++ L+H+M+    T  NF +P    +C++L  L      H 
Sbjct: 88  AFNIMIRALTTTWHNY-PLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHS 146

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + K     D     S++  Y   G +  ARKVFD++  RD VSW+S+IA Y       E
Sbjct: 147 LLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCARE 206

Query: 180 GLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            +++F  M  R+G EPD ++++SL  ACGEL  L   R + G V+ R + ++  +G++ I
Sbjct: 207 AVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALI 266

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG+L SA R F  +  R   +W A+IS Y ++G   +A+  F  M E     N I
Sbjct: 267 SMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKI 326

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           TL  VL +CA +G L  GK +     ++G   ++D ++  ALI+ YA+ G +   ++V  
Sbjct: 327 TLTAVLSACATIGALDLGKQIDEYASQRGF--QHDIFVATALIDMYAKSGSLDNAQRVFK 384

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSL 415
            + ++N  SWN +IS  A  G +KEAL L   M  +  G  P+  +    LSAC + G +
Sbjct: 385 DMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLV 444

Query: 416 QLGLQ-------IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
             G +       + G V KI+       S ++D+ ++ G    A+ L  ++ +K
Sbjct: 445 DEGYRLFDMMSTLFGLVPKIEH-----YSCMVDLLARAGHLYEAWDLIRKMPEK 493


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 181/541 (33%), Positives = 296/541 (54%), Gaps = 15/541 (2%)

Query: 211 SLRPARSIHGHV-----LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           SL  A  +H HV     LRR       L       Y+ CG +  A+  F +I  + +  W
Sbjct: 37  SLTQALQLHAHVTTGGTLRRNTY----LATKLAACYAVCGHMPYAQHIFDQIVLKNSFLW 92

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            +MI  Y  +    +AL  ++KML   ++P+  T   VL +C  L     G+ VH  ++ 
Sbjct: 93  NSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVV 152

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G+  E  Y+G +++  Y + G +     V   +  R++ SWN ++S + + G ++ A E
Sbjct: 153 GGL-EEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFE 211

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID----CKDEFVQSSLID 441
           +   M+  G + D  ++ + LSACG+V  L++G +IHG+V++        + F+ +S+ID
Sbjct: 212 VFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIID 271

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           MY  C   + A  LFE ++ K VV WNS+I G+ + G++ +A+ LF +M +     DEVT
Sbjct: 272 MYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVT 331

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            ++ + AC+ I  L  G  V   ++  G   ++ + TAL  MYA CG L  A RVFD M 
Sbjct: 332 VISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMP 391

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK- 620
           E+N+ + + M+  +G+HG+  +A S+F +ML  G+ P+E  F  +L ACSHSG V+EGK 
Sbjct: 392 EKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKE 451

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            ++   R + VEP   HY+C+VDLL R+G ++ A+ +I +M    N  +W ALL+ CR+H
Sbjct: 452 IFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLH 511

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
           + + +     ++L     +    Y  LSNIYA E  W++   VR+++    L+K P YS 
Sbjct: 512 RNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSF 571

Query: 741 I 741
           +
Sbjct: 572 V 572



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 258/491 (52%), Gaps = 21/491 (4%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L +S TN + LT+   LHAH+   G L  +   +T+L   YA  G +  ++ +FD     
Sbjct: 28  LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +SF+W  +I+ Y  NN    ++ LY KM+       NF YP VL+AC  L     G KVH
Sbjct: 88  NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVH 147

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             ++  G ++D  +  SIL  Y +FG ++ AR VFD+M  RD+ SW+++++ +  N +  
Sbjct: 148 ALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEAR 207

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK---IDGPLGN 235
              ++F  M R+G   D  T+L+L  ACG++  L+  + IHG+V+R        +G L N
Sbjct: 208 GAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMN 267

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S I MY  C  +  A + F  +  +   SW ++IS Y + G   +ALE F +M+ V   P
Sbjct: 268 SIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVP 327

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +T+I+VL +C  +  LR G +V   ++++G       +G ALI  YA CG +    +V
Sbjct: 328 DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNV-VVGTALIGMYANCGSLVCACRV 386

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
              + E+N+ +  ++++ +   G  +EA+ +  +M   G+ PD     + LSAC + G +
Sbjct: 387 FDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLV 446

Query: 416 QLGLQIHGHVIKIDCKDEFVQ------SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWN 468
             G +I   +     +D  V+      S L+D+  + G+ + AY + E ++ K +  +W 
Sbjct: 447 DEGKEIFYKMT----RDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWT 502

Query: 469 SMI--CGFYQN 477
           +++  C  ++N
Sbjct: 503 ALLSACRLHRN 513



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 200/423 (47%), Gaps = 6/423 (1%)

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           T+L S      L +   +H  +   G      YL   L   YA CG M   + +   I  
Sbjct: 27  TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           +N   WN +I  YA       AL L ++M  +G  PD+F+    L ACG++   ++G ++
Sbjct: 87  KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146

Query: 422 HGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H  V+     +D +V +S++ MY K G    A ++F+R+  + +  WN+M+ GF +NG +
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI---YID 537
             A  +F  M  +    D  T L  + AC ++  L+ GK +H  ++  G    +   ++ 
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLM 266

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            ++ DMY  C  +  A+++F+ +  ++VVSW+++I  Y   G    A  LF +M+  G  
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV 326

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+EVT +++L AC+   ++  G    + +   G   ++     ++ + +  G +  A ++
Sbjct: 327 PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRV 386

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG-TNDNGYYTLLSNIYAEEGN 716
              MP   N      ++ G  IH R     +I  E+   G T D G +T + +  +  G 
Sbjct: 387 FDEMP-EKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGL 445

Query: 717 WDE 719
            DE
Sbjct: 446 VDE 448



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 2/225 (0%)

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLL 455
           DS    + L +  N  SL   LQ+H HV       ++ ++ + L   Y+ CG    A  +
Sbjct: 21  DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F++I  K+  +WNSMI G+  N +   A+ L+ +M     + D  T+   ++AC ++   
Sbjct: 81  FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLR 140

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           E G+ VH  ++  G+ +D+Y+  ++  MY K GD++ A+ VFD M  R++ SW+ M+  +
Sbjct: 141 EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGF 200

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
             +G+   A  +F  M   G   +  T + +L AC     ++ GK
Sbjct: 201 VKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGK 245


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 184/554 (33%), Positives = 298/554 (53%), Gaps = 17/554 (3%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV-KIE 258
           ++  ++C +  +L   + +H  ++        P   S I MYSKCG +  A   F     
Sbjct: 15  VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
           +R   ++ A+IS +  +G   K  + + KM      P+  T   V+ +C     + E K 
Sbjct: 75  ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCC---EVMEVKK 131

Query: 319 VHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
           +H  +++  MG E D ++G AL+  Y + G M + +KV   +  R+++ WN +I+ YA+ 
Sbjct: 132 IHGCLLK--MGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKI 189

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQ 436
           G   EALE+  +M   G+ P  F++   LS   + G L  G  +HG V+K+       V 
Sbjct: 190 GCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVS 249

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           ++LIDMY KC     A ++FE I +K +  WNS+I    Q G+    + LF +M  + + 
Sbjct: 250 NALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGIL 309

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD--------IYIDTALTDMYAKCG 548
            D VT  T + ACS++  L  G+ +H  +I  G+ KD        + +  A+ DMYAKCG
Sbjct: 310 PDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCG 369

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  A ++FDSMS+++V SW+ MI  YGMHG   +A  +F QM ++  KPNEVT + +L 
Sbjct: 370 SMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLS 429

Query: 609 ACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           AC+H+G V  G+ +   M   FGV P ++HY C++D+L R+G +E A++++  MP  AN 
Sbjct: 430 ACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANP 489

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            +W ALL  CR+H   ++ +   +++        G Y L+SN+Y   G ++E  +VR  M
Sbjct: 490 VVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTM 549

Query: 728 EVTGLKKVPGYSTI 741
           +   +KK PG S I
Sbjct: 550 KEQNVKKTPGCSWI 563



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 261/508 (51%), Gaps = 22/508 (4%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF-DKMTS 158
           + L++C+   +L  G+++H  +I  GF       TS++  Y + G + +A  VF D    
Sbjct: 16  AFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHE 75

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           R+V ++++II+ +  N   S+G + +  M  EGV PD  T   +   C   C +   + I
Sbjct: 76  RNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC---CEVMEVKKI 132

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           HG +L+  +++D  +G++ +  Y K G +  A++ F ++  R    W AMI+ Y + G  
Sbjct: 133 HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCL 192

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YL 335
            +ALE F +M      P+  T+  +L   A  G L  GK+VH  +++ G    YD    +
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMG----YDSGVSV 248

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             ALI+ Y +C  + +   +   I E++I SWN +IS + + G     L L  +M   G+
Sbjct: 249 SNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGI 308

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVI--KIDCKDE-------FVQSSLIDMYSKC 446
           +PD  ++ + L AC ++ +L  G +IHG++I   +   DE        V ++++DMY+KC
Sbjct: 309 LPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKC 368

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  N A  +F+ + +K V  WN MI G+  +G +LEA+ +F QM     + +EVT +  +
Sbjct: 369 GSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVL 428

Query: 507 QACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERN 564
            AC++ G +  G+    ++ S +GV   I   T + DM  + G L+ A  +   M  + N
Sbjct: 429 SACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQAN 488

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQML 592
            V W A++    +HG    A    +Q+L
Sbjct: 489 PVVWRALLGACRLHGNAELAEIAARQVL 516



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 247/499 (49%), Gaps = 27/499 (5%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVF-DTFK 56
           +   +SC    NL K  +LH+ ++  G    PP+ T LI  Y++ G +  + LVF D   
Sbjct: 15  VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           E + F +  +I  ++ N    +    Y KM  E      + +P V+R C  + ++   +K
Sbjct: 75  ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KK 131

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +HG ++K G + D  + ++++ TY + G ++DA+KVF +++ RDVV W+++I  Y     
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
           + E L++F  M  +GV P   T+  +         L   +++HG V++        + N+
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNA 251

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I MY KC  +  A   F  I ++   SW ++IS + + G     L  F KML     P+
Sbjct: 252 LIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPD 311

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-------YLGPALIEFYAECGKM 349
           L+T+ TVL +C+ L  L  G+ +H  +I  G+G + +        +  A+++ YA+CG M
Sbjct: 312 LVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSM 371

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
           +   K+  ++ ++++ SWN++I  Y   G + EAL +  QM      P+  ++   LSAC
Sbjct: 372 NNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSAC 431

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEFV-------QSSLIDMYSKCGFKNLAYLLFERIQ-Q 461
            + G +      HG +     +  F         + +IDM  + G    AY + +++  Q
Sbjct: 432 NHAGFVS-----HGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQ 486

Query: 462 KSVVMWNSMICGFYQNGNS 480
            + V+W +++     +GN+
Sbjct: 487 ANPVVWRALLGACRLHGNA 505



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 202/395 (51%), Gaps = 15/395 (3%)

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N+   +  L SCA    L +GK +H  +I  G  P    +  +LI  Y++CG+M E   V
Sbjct: 10  NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSI-TSLINMYSKCGQMGEAILV 68

Query: 356 IH-AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
            +    ERN+ ++N +IS +   G++ +  +   +M+  G+MPD ++    +  C  V  
Sbjct: 69  FYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVME 128

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           ++   +IHG ++K+  + D FV S+L++ Y K G    A  +F  +  + VV+WN+MI G
Sbjct: 129 VK---KIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMING 185

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + + G   EA+ +F +M++  +     T    +   ++ G L+ GK VH  ++  G    
Sbjct: 186 YAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSG 245

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           + +  AL DMY KC  +  A  +F+ ++E+++ SW+++I  +   G  +    LF +ML 
Sbjct: 246 VSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 305

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA--------CMVDLL 645
           SGI P+ VT   +L ACSH  ++  G+     M I G+  D ++ A         ++D+ 
Sbjct: 306 SGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMY 365

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           ++ G +  A K+  SM      S W  ++ G  +H
Sbjct: 366 AKCGSMNNALKIFDSMSKKDVAS-WNIMIMGYGMH 399


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 315/612 (51%), Gaps = 8/612 (1%)

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++ +    G +D+A +    +   D    + +I  + D    +  L  +  M+ +G  P
Sbjct: 46  SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T   + + C  L  L   R+ HG V++  ++ D    NS +  Y+K G +  AER F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM---LEVKEEPNLITLITVLGSCAGLG 311
             +  R   +W  M+  Y  +G    AL  F +M   LEV+ +   + +I  L +C    
Sbjct: 166 DGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDS--VGIIAALAACCLEV 223

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
              +GK +H  +IR G+  +   +G +L++ Y +CG+++    V   +  R +++WN +I
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIK-VGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMI 282

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA      EA +  +QM+  GL  +  +  + L+AC    S   G  +HG+V++    
Sbjct: 283 GGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFL 342

Query: 432 DEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
              V +++L++MY K G    +  +F +I  K++V WN+MI  +       EAI LF ++
Sbjct: 343 PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL 402

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               L  D  T  T + A   +G L   + +H  +I  G  ++  I  A+  MYA+ GD+
Sbjct: 403 LNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDV 462

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             ++ +FD M  ++V+SW+ MI  Y +HGQ   A  +F +M  +G++PNE TF+++L AC
Sbjct: 463 VASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTAC 522

Query: 611 SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           S SG V+EG  +FN M + +G+ P ++HY CM DLL R GD+    + I SMP      +
Sbjct: 523 SVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRV 582

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           WG+LL   R    ID+ +   + +     ++ G Y +LS++YA+ G W++  +VR +M+ 
Sbjct: 583 WGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKE 642

Query: 730 TGLKKVPGYSTI 741
            GL++    S +
Sbjct: 643 KGLRRTEPISLV 654



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 286/540 (52%), Gaps = 11/540 (2%)

Query: 29  PP---ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           PP   +S  L+ S A  G +  +       + PD+F+  V+I+ +        ++  Y  
Sbjct: 38  PPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRG 97

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+ + A    F +P V++ C+ LG L  G   HG +IK G + D     S++  Y + G 
Sbjct: 98  MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTML-SLA 203
           ++DA +VFD M  RD+V+W++++  Y  N   S  L  F  M     V+ D V ++ +LA
Sbjct: 158 VEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA 217

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
             C E+ S++  + IHG+V+R  ++ D  +G S + MY KCG++  A   F  +  R   
Sbjct: 218 ACCLEVSSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVV 276

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           +W  MI  Y  +    +A + F++M     +  ++T I +L +CA       G+SVH  +
Sbjct: 277 TWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYV 336

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           +R+   P +  L  AL+E Y + GK+   EK+   I  + ++SWN +I+ Y  K M  EA
Sbjct: 337 VRRQFLP-HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEA 395

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDM 442
           + L +++    L PD F++++ + A   +GSL+   QIH ++I +   ++  + ++++ M
Sbjct: 396 ITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHM 455

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y++ G    +  +F+++  K V+ WN+MI G+  +G    A+ +F +M  N L+ +E TF
Sbjct: 456 YARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTF 515

Query: 503 LTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           ++ + ACS  G +++G W+H  L+   YG+   I     +TD+  + GDL+   +  +SM
Sbjct: 516 VSVLTACSVSGLVDEG-WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 205/423 (48%), Gaps = 13/423 (3%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFF 76
           H  ++  GL +D      L+  YA++G +  +  VFD     D   W  ++  Y+ N   
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLG 189

Query: 77  EESILLYHKM---IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             ++  + +M   +  Q      I  + L AC        G+++HG +I+ G ++D  + 
Sbjct: 190 SLALACFQEMHDALEVQHDSVGII--AALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVG 247

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           TS+L  Y + G +  AR VF  M  R VV+W+ +I  Y  N    E    F  M  EG++
Sbjct: 248 TSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQ 307

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            + VT ++L  AC +  S    RS+HG+V+RR+      L  + + MY K G + S+E+ 
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F KI  +   SW  MI+ Y     + +A+  F+++L     P+  T+ TV+ +   LG L
Sbjct: 368 FGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSL 427

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           R  + +H  II  G   E   +  A++  YA  G +    ++   +  ++++SWN +I  
Sbjct: 428 RHCRQIHSYIIGLGYA-ENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMG 486

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG-------LQIHGHVI 426
           YA  G  K ALE+  +M+  GL P+  +  S L+AC   G +  G       LQ +G + 
Sbjct: 487 YAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIP 546

Query: 427 KID 429
           +I+
Sbjct: 547 QIE 549



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 172/345 (49%), Gaps = 2/345 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H +++  GL  D    T L++ Y + G +  +R VF T        W  +I  Y  N  
Sbjct: 231 IHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER 290

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E+   + +M  E   +      ++L AC+       G  VHG +++  F    V++T+
Sbjct: 291 PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETA 350

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  YG+ G ++ + K+F K+ ++ +VSW+++IA+Y      +E + +F  ++ + + PD
Sbjct: 351 LLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPD 410

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           + TM ++  A   L SLR  R IH +++      +  + N+ + MY++ GD++++   F 
Sbjct: 411 YFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFD 470

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+  +   SW  MI  Y   G  + ALE F +M     +PN  T ++VL +C+  G + E
Sbjct: 471 KMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDE 530

Query: 316 G-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           G    +  +   GM P+ ++ G  + +     G + E  + I ++
Sbjct: 531 GWMHFNLMLQEYGMIPQIEHYG-CMTDLLGREGDLREVLQFIESM 574



 Score = 39.7 bits (91), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 51/114 (44%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P F    +LR   ++H++++  G   +      ++  YA  G + +SR +FD     D 
Sbjct: 418 VPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDV 477

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W  +I  Y  +   + ++ ++ +M       +   + SVL ACS  G +  G
Sbjct: 478 ISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 200/639 (31%), Positives = 332/639 (51%), Gaps = 19/639 (2%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFG--CLDDARKVFDKM--TSRDVVSWSSIIA 169
           GE +H   +K G      +  S++  Y  F    L  A  VF  +   +RDV SW+S++ 
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90

Query: 170 SYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
               +  ++  L  F SM+    + P   +  +   A     S      +H        K
Sbjct: 91  PLSHHRPLA-ALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHA----LACK 145

Query: 229 IDGPLGNSFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           +     N F+      MY K G +  A+  F ++  R   SW AM++ Y      Q+A E
Sbjct: 146 LPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFE 205

Query: 284 SFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
            F +ML E     N      VL + +    L  G  VH  +++ GM   +  +  +L+  
Sbjct: 206 LFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGM-VGFVSVENSLVTM 264

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           YA+ G M     V  +  ERN ++W+ +I+ Y++ G ++ A+ +  QM   G  P  F++
Sbjct: 265 YAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTL 324

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
              L+AC +VG+L  G Q HG ++K+  + + +V+S+L+DMY+KCG    A   F +  +
Sbjct: 325 VGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSE 384

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
             +V+W +M+ G  QNG   +A+ L+ +M    +  + +T  + ++AC+ +  LE GK +
Sbjct: 385 LDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQL 444

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H +++ +G      + +AL+ MY+KCG+L+    VF  M  R+V++W+++I  +  +G+ 
Sbjct: 445 HTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRG 504

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYAC 640
           NDA +LF++M   G  P+ VTF+N+L ACSH G V+ G  YF +M + +G+ P L HYAC
Sbjct: 505 NDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYAC 564

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVD+LSR+G +  A   I S+       +W  +L  CR  +  DV     ++L   GT D
Sbjct: 565 MVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGD 624

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +  Y LLSNIYA +  W++  +VR +M++ G+ K PG S
Sbjct: 625 SAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCS 663



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 223/433 (51%), Gaps = 8/433 (1%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           ST L+  Y ++G +  ++LVFD     +   WA ++  Y      +E+  L+ +M+ E  
Sbjct: 156 STALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECP 215

Query: 92  TISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
              N F+  +VL A S    L  G +VHG ++K G      ++ S++  Y + GC+D A 
Sbjct: 216 LHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAF 275

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            VF+    R+ ++WS++I  Y  N +    ++MF  M   G  P   T++ +  AC ++ 
Sbjct: 276 HVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVG 335

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           +L   +  HG +++   ++   + ++ + MY+KCG +  A+  F +  +     WTAM++
Sbjct: 336 TLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVT 395

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            + ++G F++AL  + +M +    PN +T+ ++L +CAGL  L  GK +H QI++ G G 
Sbjct: 396 GHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGL 455

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
               +G AL   Y++CG + +   V   +  R++++WN +IS +++ G   +A+ L  +M
Sbjct: 456 GAS-VGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEM 514

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKC 446
           +  G  PD  +  + L AC ++G +  G      +IK        D +  + ++D+ S+ 
Sbjct: 515 KLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHY--ACMVDILSRA 572

Query: 447 GFKNLAYLLFERI 459
           G  + A    E I
Sbjct: 573 GMLSEAKDFIESI 585



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 237/494 (47%), Gaps = 11/494 (2%)

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL--SAERTFVKIEK--RCTTSWTAM 268
           R   ++H   L+       P+ NS I  YS    L   +A   F  I    R   SW ++
Sbjct: 29  RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88

Query: 269 ISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           ++  +       AL  F  ML      P+  +      + A       G  VH    +  
Sbjct: 89  LNPLSHHRPL-AALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLP 147

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                 ++  AL+  Y + G + + + V   +  RN +SW  +++ YA +  S+EA EL 
Sbjct: 148 SASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELF 207

Query: 388 VQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV--QSSLIDMYS 444
            QM     L  + F   + LSA      L +G+Q+HG V+K D    FV  ++SL+ MY+
Sbjct: 208 RQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVK-DGMVGFVSVENSLVTMYA 266

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           K G  + A+ +FE  ++++ + W++MI G+ QNGN+  A+ +F QM+       E T + 
Sbjct: 267 KAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVG 326

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + ACS++G L +GK  H  ++  G    +Y+ +AL DMYAKCG +  A+  F+  SE +
Sbjct: 327 VLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELD 386

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           +V W+AM+  +  +G+   A  L+ +M   G+ PN +T  ++L AC+   ++E GK    
Sbjct: 387 IVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHT 446

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
            +  FG        + +  + S+ G++E    +   MP   +   W ++++G   + R +
Sbjct: 447 QILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPH-RDVIAWNSIISGFSQNGRGN 505

Query: 685 VMKTIEKELSVTGT 698
               + +E+ + GT
Sbjct: 506 DAINLFEEMKLEGT 519


>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 171/469 (36%), Positives = 273/469 (58%), Gaps = 6/469 (1%)

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           +  AL  F +M+ +   PN  T      SCA L  L   ++ H  + +  +  +  +   
Sbjct: 97  YPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSD-PHTTH 155

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLM 396
           +LI  Y+ CG+++   KV   I  R+++SWN +I+ YA+ G ++EA+E+  +M +  G  
Sbjct: 156 SLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFE 215

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLL 455
           PD  S+ S L ACG +G L+LG  + G V++     + ++ S+LI MY+KCG    A  +
Sbjct: 216 PDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRI 275

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ +  + V+ WN++I G+ QNG + EAI+LFH M  +C+  +++T    + AC+ IG L
Sbjct: 276 FDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGAL 335

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           + GK +       G + DI++ TAL DMYAKCG L +AQRVF  M ++N  SW+AMI   
Sbjct: 336 DLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISAL 395

Query: 576 GMHGQLNDAASLFKQMLD--SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVE 632
             HG+  +A SLF+ M D   G +PN++TF+ +L AC H+G V EG   F+ M  +FG+ 
Sbjct: 396 ASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLV 455

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P ++HY+CMVDLL+R+G +  A+ +I  MP   +    GALL  CR  K +D+ + + + 
Sbjct: 456 PKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRM 515

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +     +++G Y + S IYA    W++  ++R +M   G+ K PG S I
Sbjct: 516 ILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWI 564



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 247/474 (52%), Gaps = 24/474 (5%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTF-KEPDSF 61
           L + C++ + L ++HA ++V    + P  +  L+     + +   + L+F      P+ +
Sbjct: 24  LAKQCSSSKTLQQVHAQMVVKSSIHSP--NNHLLSKAIHLKNFTYASLLFSHIAPHPNDY 81

Query: 62  MWAVLIKCYM--WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            + ++I+     W+++   ++ L+H+M+    + +NF +P    +C++L  L      H 
Sbjct: 82  AFNIMIRALTTTWHHY-PLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHS 140

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            + K     D     S++  Y   G +  ARKVFD++  RD+VSW+S+IA Y       E
Sbjct: 141 LVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCARE 200

Query: 180 GLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
            +++F  M  R+G EPD ++++S+  ACGEL  L   R + G V+ R + ++  +G++ I
Sbjct: 201 AVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALI 260

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCGDL SA R F  +  R   +W A+IS Y ++G   +A+  F  M E     N I
Sbjct: 261 SMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKI 320

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIH 357
           TL  VL +CA +G L  GK +     ++G   ++D ++  ALI+ YA+CG ++  ++V  
Sbjct: 321 TLTAVLSACATIGALDLGKQIDEYASQRGF--QHDIFVATALIDMYAKCGSLASAQRVFK 378

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSL 415
            + ++N  SWN +IS  A  G +KEAL L   M  +  G  P+  +    LSAC + G +
Sbjct: 379 EMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLV 438

Query: 416 QLGLQ-------IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
             G +       + G V KI+       S ++D+ ++ G    A+ L E++ +K
Sbjct: 439 NEGYRLFDMMSTLFGLVPKIEH-----YSCMVDLLARAGHLYEAWDLIEKMPEK 487



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 226/450 (50%), Gaps = 48/450 (10%)

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +FH M+   + P+  T      +C  L  L PAR+ H  V +  +  D    +S I 
Sbjct: 100 ALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLIT 159

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLI 298
           MYS+CG +  A + F +I +R   SW +MI+ Y ++G  ++A+E F +M      EP+ +
Sbjct: 160 MYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEM 219

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           +L++VLG+C  LG L  G+ V   ++ +GM     Y+G ALI  YA+CG +    ++   
Sbjct: 220 SLVSVLGACGELGDLELGRWVEGFVVERGMTLN-SYIGSALISMYAKCGDLGSARRIFDG 278

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R++++WN +IS YA+ GM+ EA+ L   M+   +  +  ++ + LSAC  +G+L LG
Sbjct: 279 MAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLG 338

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
            QI  +  +   + D FV ++LIDMY+KCG    A  +F+ + QK+   WN+MI     +
Sbjct: 339 KQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASH 398

Query: 478 GNSLEAINLFHQMYLN--CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
           G + EA++LF  M         +++TF+  + AC + G + +G                 
Sbjct: 399 GKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEG----------------- 441

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSE-----RNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
                              R+FD MS        +  +S M+D     G L +A  L ++
Sbjct: 442 ------------------YRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEK 483

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           M +   KP++VT   +L AC    +V+ G+
Sbjct: 484 MPE---KPDKVTLGALLGACRSKKNVDIGE 510


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 179/490 (36%), Positives = 277/490 (56%), Gaps = 3/490 (0%)

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F +I++     W  MI     +  F  A+E +  M      PN  T   VL +CA L  L
Sbjct: 69  FHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDL 128

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           + G  +H  +++ G   +  ++  +L+  YA+CG + +  KV   I ++N++SW  +IS 
Sbjct: 129 QLGVKIHTLVVKGGFDCDV-FVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKD 432
           Y   G  +EA+++  ++    L PDSF++   LSAC  +G L  G  IH  ++++   ++
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
            FV +SL+DMY+KCG    A  +F+ + +K +V W +MI G+  NG   EAI+LF QM  
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             ++ D  T +  + AC+ +G LE G+WV   +       +  + TAL D+YAKCG +  
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR 367

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A  VF  M E++ V W+A+I    M+G +  +  LF Q+   GIKP+  TF+ +L  C+H
Sbjct: 368 AWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTH 427

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G V+EG+ YFN+M R F + P ++HY CMVDLL R+G ++ A ++I +MP  AN  +WG
Sbjct: 428 AGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWG 487

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL  CRIH+   + +   K+L      ++G Y LLSNIY+    WDE  KVR  M    
Sbjct: 488 ALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKR 547

Query: 732 LKKVPGYSTI 741
           ++K PG S I
Sbjct: 548 IQKPPGCSWI 557



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 236/454 (51%), Gaps = 10/454 (2%)

Query: 24  GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
           GL +D      ++    +      +R +F   K+P+ F+W  +I+  + N+ F+++I  Y
Sbjct: 41  GLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFY 100

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
             M  E    +NF +P VL+AC+ L DL  G K+H  ++K GFD D  ++TS++C Y + 
Sbjct: 101 GLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC 160

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G L+DA KVFD +  ++VVSW++II+ Y       E + MF  ++   + PD  T++ + 
Sbjct: 161 GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVL 220

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC +L  L     IH  ++   +  +  +G S + MY+KCG++  A   F  + ++   
Sbjct: 221 SACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIV 280

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW AMI  Y  +G  ++A++ F++M     +P+  T++ VL +CA LG L  G+ V   +
Sbjct: 281 SWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV 340

Query: 324 IRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            R     E+ Y   LG ALI+ YA+CG MS   +V   + E++ + WN +IS  A  G  
Sbjct: 341 DRN----EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYV 396

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SS 438
           K +  L  Q++  G+ PD  +    L  C + G +  G +    + +       ++    
Sbjct: 397 KISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGC 456

Query: 439 LIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMI 471
           ++D+  + G  + A+ L   +  + + ++W +++
Sbjct: 457 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 198/352 (56%), Gaps = 8/352 (2%)

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           + H I + NI  WN +I          +A+E    M++ G +P++F+    L AC  +  
Sbjct: 68  LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127

Query: 415 LQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           LQLG++IH  V+K   DC D FV++SL+ +Y+KCG+   A+ +F+ I  K+VV W ++I 
Sbjct: 128 LQLGVKIHTLVVKGGFDC-DVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIIS 186

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
           G+   G   EAI++F ++    L  D  T +  + AC+ +G L  G+W+H  ++  G+ +
Sbjct: 187 GYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVR 246

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           ++++ T+L DMYAKCG+++ A+ VFD M E+++VSW AMI  Y ++G   +A  LF QM 
Sbjct: 247 NVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQ 306

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM--RIFGVEPDLQHYACMVDLLSRSGD 650
              +KP+  T + +L AC+  G++E G++    +    F   P L     ++DL ++ G 
Sbjct: 307 RENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYAKCGS 364

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
           +  A+++   M    +  +W A+++G  ++  + +   +  ++   G   +G
Sbjct: 365 MSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDG 415


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 181/567 (31%), Positives = 295/567 (52%), Gaps = 19/567 (3%)

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           DV E +    +M+ EG        + L   C E+ SL  AR++HGH+ +     D  +  
Sbjct: 62  DVQEAM----TMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVAT 117

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S +  Y +CG    A R F  + +R   +WTA+++ Y  +      LE FV+MLE+   P
Sbjct: 118 SLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +  TL   L +C     +  GK VH   I+ G       +G +L   YA+ G +    + 
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIKYG-AESITSMGNSLCSLYAKLGSLDSALRA 236

Query: 356 IHAIGERNILSWNMLISEYARKGMSKE-ALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
              I E+N+++W  +IS  A      E  L L + M   G+MP+ F++ S +S CG    
Sbjct: 237 FWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLD 296

Query: 415 LQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L LG Q+     KI C+    V++S + +Y + G  + A  LFE+++  S++ WN+MI G
Sbjct: 297 LNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISG 356

Query: 474 FYQNGNS-----------LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           + Q  +S            +A+ +F  +  + ++ D  TF + +  CS +  LE+G+ +H
Sbjct: 357 YAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIH 416

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
            + I  G   D+ +++AL +MY KCG +Q A + F  M  R  V+W++MI  Y  HGQ  
Sbjct: 417 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACM 641
           +A  LF++M  +G++PNE+TF+++L ACS++G VEE + YF+ M+  + +EP + HY CM
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCM 536

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           +D+  R G +E AF  I    F  N +IW +L+ GCR H  +++      +L        
Sbjct: 537 IDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGI 596

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIME 728
             Y LL N+Y     W +  +VR +M+
Sbjct: 597 ETYILLLNMYISTERWQDVARVRKLMK 623



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 159/562 (28%), Positives = 270/562 (48%), Gaps = 51/562 (9%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+ E   + + +Y  +L  C  +G LG+   VHG + K G   D  + TS++  Y   G 
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
             DAR++FD M  R+VV+W++++  Y  N+  + GL++F  M+  G  P   T+ +   A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C   C +   + +HG+ ++   +    +GNS   +Y+K G L SA R F +I ++   +W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 266 TAMIS-CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           T MIS C       +  L  F+ ML     PN  TL +V+  C     L  GK V  Q  
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV--QAF 306

Query: 325 RKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR------- 376
              +G E +  +  + +  Y   G+  E  ++   + + +I++WN +IS YA+       
Sbjct: 307 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD 366

Query: 377 ----KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CK 431
               +    +AL +   ++   + PD F+ +S LS C  + +L+ G QIH   IK     
Sbjct: 367 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 426

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V S+L++MY+KCG    A   F  +  ++ V W SMI G+ Q+G   EAI LF +M 
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L  +  +E+TF++ + ACS  G +E+ +  H+    + + K  Y    + D Y       
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAE--HY----FDMMKKEYCIEPVVDHYG------ 534

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
                              MID +   G++ DA S  K+   +G +PNE  + +++  C 
Sbjct: 535 ------------------CMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAGCR 573

Query: 612 HSGSVEEGKFYFNAMRIFGVEP 633
             G++E    ++ A ++  ++P
Sbjct: 574 SHGNMELA--FYAADKLLELKP 593



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 264/580 (45%), Gaps = 38/580 (6%)

Query: 1   MPLFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL   C  +  L     +H H+  TG   D   +T L+ +Y   G+ R +R +FD   E
Sbjct: 82  VPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPE 141

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W  L+  Y  N+     + ++ +M+      S++   + L AC +  D+  G++V
Sbjct: 142 RNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQV 201

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG  IK G +    +  S+   Y + G LD A + F ++  ++V++W+++I++  ++ + 
Sbjct: 202 HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEEC 261

Query: 178 SE-GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            E GL +F  M+ +GV P+  T+ S+   CG    L   + +     +   + + P+ NS
Sbjct: 262 VELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNS 321

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY------------NRSGWFQKALES 284
            + +Y + G+   A R F ++E     +W AMIS Y             RS  FQ AL  
Sbjct: 322 TMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ-ALTI 380

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F  +     +P+L T  ++L  C+ +  L +G+ +H Q I+ G   +   +  AL+  Y 
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV-VVNSALVNMYN 439

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG + +  K    +  R  ++W  +IS Y++ G  +EA++L  +M+  G+ P+  +  S
Sbjct: 440 KCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVS 499

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-Q 461
            LSAC   G ++        + K  C +  V     +IDM+ + G    A+   +R   +
Sbjct: 500 LLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFE 559

Query: 462 KSVVMWNSMICGFYQNGN-----------------SLEAINLFHQMYLNCLEMDEVTFLT 504
            +  +W+S++ G   +GN                  +E   L   MY++     +V  + 
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVR 619

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            +    ++G L    W+  K   Y  R +       T++Y
Sbjct: 620 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELY 659


>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
 gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
          Length = 564

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 302/548 (55%), Gaps = 15/548 (2%)

Query: 140 YGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVT 198
           YG+ G +++AR VF+ +      SW+ ++ +Y +N    + L++F  MV   G+  D VT
Sbjct: 2   YGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVT 61

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
            ++ A AC  + SL   +  H   +   ++    L ++ + MY +CG    A + F +I 
Sbjct: 62  FVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIP 121

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
            +    W  MI+ Y ++G F +ALE +  M     +P+ +T + VL +C     L  G+ 
Sbjct: 122 VKNVVCWNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHACT----LESGRL 174

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +H  ++  G+  +  ++G AL+  + +CG +S+ ++V   I  R+++SWN L+S Y ++G
Sbjct: 175 IHQDVVSAGLERD-KFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQG 233

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQS 437
             KEA EL  +M   GL P+S +  S L AC ++  L+   +IH  +      +DE V +
Sbjct: 234 HRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLR---EIHQELADQGLEQDEQVGN 290

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           +LI  Y+K   ++ +  +FER++++SVV W  MI G  ++G    A++L+ +M +  +  
Sbjct: 291 TLITAYNKFSLED-SVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP 349

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D V  + A+ AC+++  L +G+ +H  +    +  D+++ TA+ +MY KCG    A+ VF
Sbjct: 350 DAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVF 409

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             M    V +W+++I  Y  HG   DA  L+++M  SG +P+ VT +  L+ACSH G ++
Sbjct: 410 QGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLD 469

Query: 618 EGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             + FY   +  + VE    H+ C+VDL  R+G I+ A ++I SMP   + S W ALLN 
Sbjct: 470 RAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNA 529

Query: 677 CRIHKRID 684
           C+ H  ++
Sbjct: 530 CKAHNDME 537



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 300/551 (54%), Gaps = 16/551 (2%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI- 97
           Y + GS+  +R VF++ K    F W +++  Y  N   ++++ L+ +M+      ++ + 
Sbjct: 2   YGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVT 61

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + +   ACS +G L  G++ H R ++ G +   ++ ++++  YG  G  ++ARK+FD++ 
Sbjct: 62  FVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIP 121

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            ++VV W+ +IA+Y  N   SE L++++ M    ++PD VT L++  A    C+L   R 
Sbjct: 122 VKNVVCWNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHA----CTLESGRL 174

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  V+   ++ D  +GN+ + M+ KCG L  A+R F +I  R   SW A++S Y + G 
Sbjct: 175 IHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGH 234

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            ++A E F +M +   +PN +T +++L +C+ L  LRE   +H ++  +G+  + + +G 
Sbjct: 235 RKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLRE---IHQELADQGLEQD-EQVGN 290

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            LI  Y +   + +   V   +  R+++SW  +I      G    AL+L  +M   G+ P
Sbjct: 291 TLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP 349

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           D+ ++  +L AC +V +L  G +IH  V       D FV +++++MY KCG    A  +F
Sbjct: 350 DAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVF 409

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           + ++  +V  WNS+I  + Q+G++ +A+ L+ +M L+    D VT L A+ ACS++G L+
Sbjct: 410 QGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLD 469

Query: 517 KGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDC 574
           + +  +  ++  Y V         L D++ + G +  A+ +  SM  R ++ +W+A+++ 
Sbjct: 470 RAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNA 529

Query: 575 YGMHGQLNDAA 585
              H  +   A
Sbjct: 530 CKAHNDMERGA 540



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 241/476 (50%), Gaps = 18/476 (3%)

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLI 298
           MY KCG +  A   F  I++    SW  M+  Y  +G   +ALE F +M++V     + +
Sbjct: 1   MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T +T   +C+ +G L EGK  H + +  G+      L  AL+  Y  CG   E  K+   
Sbjct: 61  TFVTAATACSLVGSLEEGKQFHSRFVESGLESSL-ILDSALMNMYGRCGSAEEARKIFDR 119

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           I  +N++ WN++I+ YA+ G   EALEL   M    L PD  +  + L AC    +L+ G
Sbjct: 120 IPVKNVVCWNVMIAAYAQNGHFSEALELYYDMN---LKPDRVTFLNVLHAC----TLESG 172

Query: 419 LQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             IH  V+     +D+FV ++L++M+ KCG  + A  +F+RI  + V+ WN+++  + Q 
Sbjct: 173 RLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQ 232

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G+  EA  LF +M    L+ + VT+L+ + ACS++ QL +   +H +L   G+ +D  + 
Sbjct: 233 GHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLRE---IHQELADQGLEQDEQVG 289

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
             L   Y K   L+ +  VF+ M  R+VVSW+ MI     HG    A  L+++M+  G++
Sbjct: 290 NTLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVR 348

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
           P+ V  +  L AC+   ++ EG+     +    +  D+     +V++  + G    A  +
Sbjct: 349 PDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAV 408

Query: 658 IHSMPFPANGSIWGALLNGCRIHKR-IDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
              M      + W +L+     H    D +K  E+ + ++GT  +G  TLL  ++A
Sbjct: 409 FQGMK-TTTVATWNSLIGAYAQHGHATDALKLYER-MELSGTRPDG-VTLLCALFA 461



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 239/467 (51%), Gaps = 17/467 (3%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L +  + H+  + +GL       + L+  Y   GS   +R +FD     +   W V+I 
Sbjct: 74  SLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIA 133

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  N  F E++ LY+ M  +   ++   + +VL AC+    L SG  +H  ++  G ++
Sbjct: 134 AYAQNGHFSEALELYYDMNLKPDRVT---FLNVLHACT----LESGRLIHQDVVSAGLER 186

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  +  +++  +G+ G L DA++VFD++  RDV+SW+++++ Y       E  ++F  M 
Sbjct: 187 DKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMD 246

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           + G++P+ VT LSL  AC    SL   R IH  +  + ++ D  +GN+ I  Y+K   L 
Sbjct: 247 KAGLQPNSVTYLSLLPACS---SLEQLREIHQELADQGLEQDEQVGNTLITAYNKF-SLE 302

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            +   F ++++R   SWT MI      G+  +AL+ + +M+     P+ + L+  L +C 
Sbjct: 303 DSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVCALDACT 362

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +  L EG+ +H  +    M  +  ++  A++  Y +CGK +E E V   +    + +WN
Sbjct: 363 SVENLAEGRKIHRLVEGTTMVTDV-FVATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWN 421

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            LI  YA+ G + +AL+L  +M+  G  PD  ++  +L AC ++G L    + +  +++ 
Sbjct: 422 SLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFYSGMVE- 480

Query: 429 DCKDEFVQSS---LIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMI 471
           D + E V +    L+D++ + G+ + A  L   +  +  +  W +++
Sbjct: 481 DYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALL 527



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 3/272 (1%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L  +C++L +L  +H  L   GL  D      LI +Y +  SL  S  VF+  K    
Sbjct: 258 LSLLPACSSLEQLREIHQELADQGLEQDEQVGNTLITAYNKF-SLEDSVAVFERMKRRSV 316

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I   + + +   ++ LY +M+ E            L AC+S+ +L  G K+H  
Sbjct: 317 VSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVCALDACTSVENLAEGRKIHRL 376

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +       D  + T+++  YG+ G   +A  VF  M +  V +W+S+I +Y  +   ++ 
Sbjct: 377 VEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWNSLIGAYAQHGHATDA 436

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH-GHVLRRKIKIDGPLGNSFIV 239
           LK++  M   G  PD VT+L    AC  L  L  AR  + G V   +++         + 
Sbjct: 437 LKLYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFYSGMVEDYQVEAVPAHFGCLVD 496

Query: 240 MYSKCGDLLSAERTFVKIEKRC-TTSWTAMIS 270
           ++ + G +  AE     +  R   ++WTA+++
Sbjct: 497 LFCRAGWIDEAEELIASMPVRPHISAWTALLN 528


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 204/745 (27%), Positives = 363/745 (48%), Gaps = 23/745 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  +    L  D      L+  Y + G L  ++ +FD  +  +   W +L+  +  N  
Sbjct: 252 IHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGR 311

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE-KVHGRIIKCGFDKDDVIQT 134
             E+  L   M  E       +  ++L  CSS G L       H  I+  G D++ V+ T
Sbjct: 312 RRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVAT 371

Query: 135 SILCTYGEFGCLDDARKVFDKM---TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           ++L  +   G +D AR++F+K+   +++ +  W+++I +Y       E L +  S+  +G
Sbjct: 372 ALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQG 431

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V+P+ +T +S   AC    SL+  R++H  +       +  + N+ + MY KCG LL + 
Sbjct: 432 VKPNCITFISSLGACS---SLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSA 488

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F ++ ++   SW + I+ ++  G   + ++   +M         +T +T L SC    
Sbjct: 489 KLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPA 548

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            L++G  +H +I++ G   +   +  A+I  Y  CG +    ++   +   +++ W  ++
Sbjct: 549 SLQDGVLMHEKIVQCGYEADT-VVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGML 607

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG--SLQLGLQIHGHVIKID 429
           + Y + G +K+ +E    M   GL P   ++ + ++   + G    + G+ I     +  
Sbjct: 608 TVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESG 667

Query: 430 CKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA-INLF 487
            + E  V +SLI+M+S+    + A  +F+R  +KSV +  +M+  + +     EA + LF
Sbjct: 668 LESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLF 727

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            +M L  LE   VT +TA+ AC  +      K VH +    G+  +  +   L DMY K 
Sbjct: 728 ARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKA 787

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           GD+ TA+ +FD    RNV +W+AM   Y   G       L + M   G +P+ VTF+++L
Sbjct: 788 GDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLL 847

Query: 608 WACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH--SMPFP 664
             C HSG +EE ++ F AMR  FG++P  +HY+C++DLL+R+G+++ A   I   S+  P
Sbjct: 848 SVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSP 907

Query: 665 ANGSIWGALLNGCR--------IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGN 716
           A+  +W ALL  CR          +       +EK    +  + +  +  L+NI A  GN
Sbjct: 908 ASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGN 967

Query: 717 WDEFGKVRSIMEVTGLKKVPGYSTI 741
           WDE   +R  M   GL+K PG S I
Sbjct: 968 WDEALSIRKAMAEKGLRKEPGRSLI 992



 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/634 (29%), Positives = 316/634 (49%), Gaps = 26/634 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTR-------LIESYAEMGSLRSSRLVF 52
           L + C  L  L    RLHA +  +GL  D    +        L++ Y + G    ++  F
Sbjct: 20  LLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 79

Query: 53  DTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG 112
           D+    + F W  ++  Y       +++  +H+MI+        +Y  +L+ C  LGDL 
Sbjct: 80  DSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLA 139

Query: 113 SGEKVHGRIIKCGFDKDDVIQTS-------ILCTYGEFGCLDDARKVFDKMTSRDVVSWS 165
            G+++H +I + G   DD  ++        ++  YG+ G  D+A++ FD +  +++ SW+
Sbjct: 140 QGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWT 199

Query: 166 SIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           SI+ +YF     ++ L+ FH M++ GVEPD +  L+    CG L  L     IH  +  +
Sbjct: 200 SILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDK 259

Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
            +  D  +GN+ + MY KCG L  A+  F  +E+R   SWT ++S +  +G  ++     
Sbjct: 260 PLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLL 319

Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGK-SVHCQIIRKGMGPEYDYLGPALIEFYA 344
             M     +P+ + L+T+L  C+  G L E     H  I+  G+  E   +  AL+  +A
Sbjct: 320 RSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREA-VVATALLSMFA 378

Query: 345 ECGKMSECEKVIHAIGERN---ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            CG++ +  ++   + + +   I  WN +I+ YA +G SKEAL LL  +Q  G+ P+  +
Sbjct: 379 RCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCIT 438

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQ 460
             SSL AC    SLQ G  +H  + +     E  V ++L+ MY KCG    +  LF  + 
Sbjct: 439 FISSLGACS---SLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMA 495

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           +K +  WNS I     +G S E I L  QM       ++VTFLTA+ +C++   L+ G  
Sbjct: 496 EKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVL 555

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H K++  G   D  + +A+ +MY +CG L  A+ +F  +   +V+ W+ M+  Y   G+
Sbjct: 556 MHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGR 615

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
                  F+ ML  G+KP  VT +N++   + SG
Sbjct: 616 TKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSG 649



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 163/577 (28%), Positives = 303/577 (52%), Gaps = 25/577 (4%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS-------ILCTYGEFGCLDDAR 150
           Y  +L+ C  LGDL  G+++H +I + G   DD  ++        ++  YG+ G  D+A+
Sbjct: 17  YARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQ 76

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
           + FD +  +++ SW+SI+ +YF     ++ L+ FH M++ GVEPD +    L + CG L 
Sbjct: 77  RAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLG 136

Query: 211 SLRPARSIHGHVLRRKIKIDGP-------LGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            L   + +H  +    + +D         LGN  + MY KCG    A+R F  I  +   
Sbjct: 137 DLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIF 196

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SWT+++  Y  +G   +ALE F +M++   EP+ +  +  L  C  L  L +G  +H QI
Sbjct: 197 SWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQI 256

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
             K +  + + +G AL+  Y +CG++   +++   +  RN++SW +L+S +A  G  +E 
Sbjct: 257 QDKPLDSDLE-IGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRET 315

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSL-QLGLQIHGHVI--KIDCKDEFVQSSLI 440
             LL  M   G+ PD   + + L+ C + G L +     H +++   +D ++  V ++L+
Sbjct: 316 WGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLD-REAVVATALL 374

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVM---WNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
            M+++CG  + A  +FE++   S  +   WN+MI  +   G S EA+ L   + L  ++ 
Sbjct: 375 SMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKP 434

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           + +TF++++ ACS+   L+ G+ +H  +   G  +++ +  AL  MY KCG L  + ++F
Sbjct: 435 NCITFISSLGACSS---LQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLF 491

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             M+E+++ SW++ I  +  HG+ ++   L  QM   G    +VTF+  L +C+   S++
Sbjct: 492 SEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQ 551

Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGA 654
           +G      +   G E D    + ++++  R G ++ A
Sbjct: 552 DGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRA 588



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 255/520 (49%), Gaps = 22/520 (4%)

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-------LGN 235
           M  ++ R GV+    +   L + CG L  L   + +H  +    + +D         LGN
Sbjct: 1   MRAAISRSGVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGN 60

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
             + MY KCG    A+R F  I  +   SWT+++  Y  +G   +ALE F +M++   EP
Sbjct: 61  CLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEP 120

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGM------GPEYDYLGPALIEFYAECGKM 349
           + +    +L  C  LG L +GK +H QI   G+           +LG  L++ Y +CG+ 
Sbjct: 121 DRLVYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRT 180

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
            E ++   +I  +NI SW  ++  Y   G+  +ALE   QM   G+ PD     ++L+ C
Sbjct: 181 DEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVC 240

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
           G +  L+ G  IH  +       +  + ++L+ MY KCG  +LA  LF+ +++++V+ W 
Sbjct: 241 GILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWT 300

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK-LIS 527
            ++  F +NG   E   L   M +  ++ D+V  LT +  CS+ G L++  W+ H  ++ 
Sbjct: 301 ILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVG 360

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN---VVSWSAMIDCYGMHGQLNDA 584
            G+ ++  + TAL  M+A+CG +  A+ +F+ +++ +   +  W+AMI  Y   G   +A
Sbjct: 361 GGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEA 420

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDL 644
             L   +   G+KPN +TF++ L ACS   S+++G+     +   G + ++     +V +
Sbjct: 421 LFLLDSLQLQGVKPNCITFISSLGACS---SLQDGRALHLLIHESGFDQEVSVANALVTM 477

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
             + G +  + K+   M      S W + +     H R D
Sbjct: 478 YGKCGSLLDSAKLFSEMAEKDLAS-WNSAIAAHSYHGRSD 516


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 315/612 (51%), Gaps = 8/612 (1%)

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++ +    G +D+A +    +   D    + +I  + D    +  L  +  M+ +G  P
Sbjct: 46  SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T   + + C  L  L   R+ HG V++  ++ D    NS +  Y+K G +  AER F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM---LEVKEEPNLITLITVLGSCAGLG 311
             +  R   +W  M+  Y  +G    AL  F +M   LEV+ +   + +I  L +C    
Sbjct: 166 DGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDS--VGIIAALAACCLEF 223

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
              +GK +H  +IR G+  +   +G +L++ Y +CG+++    V   +  R +++WN +I
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIK-VGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMI 282

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA      EA +  +QM+  GL  +  +  + L+AC    S   G  +HG+V++    
Sbjct: 283 GGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFL 342

Query: 432 DEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
              V +++L++MY K G    +  +F +I  K++V WN+MI  +       EAI LF ++
Sbjct: 343 PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL 402

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               L  D  T  T + A   +G L   + +H  +I  G  ++  I  A+  MYA+ GD+
Sbjct: 403 LNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDV 462

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             ++ +FD M  ++V+SW+ MI  Y +HGQ   A  +F +M  +G++PNE TF+++L AC
Sbjct: 463 VASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTAC 522

Query: 611 SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           S SG V+EG  +FN M + +G+ P ++HY CM DLL R GD+    + I SMP      +
Sbjct: 523 SVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRV 582

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           WG+LL   R    ID+ +   + +     ++ G Y +LS++YA+ G W++  +VR +M+ 
Sbjct: 583 WGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKE 642

Query: 730 TGLKKVPGYSTI 741
            GL++    S +
Sbjct: 643 KGLRRTEPISLV 654



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 284/540 (52%), Gaps = 11/540 (2%)

Query: 29  PP---ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           PP   +S  L+ S A  G +  +       + PD+F+  V+I+ +        ++  Y  
Sbjct: 38  PPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRG 97

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+ + A    F +P V++ C+ LG L  G   HG +IK G + D     S++  Y + G 
Sbjct: 98  MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTML-SLA 203
           ++DA +VFD M  RD+V+W+ ++  Y  N   S  L  F  M     V+ D V ++ +LA
Sbjct: 158 VEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA 217

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
             C E  S++  + IHG+V+R  ++ D  +G S + MY KCG++  A   F  +  R   
Sbjct: 218 ACCLEFSSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVV 276

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           +W  MI  Y  +    +A + F++M     +  ++T I +L +CA       G+SVH  +
Sbjct: 277 TWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYV 336

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           +R+   P +  L  AL+E Y + GK+   EK+   I  + ++SWN +I+ Y  K M  EA
Sbjct: 337 VRRQFLP-HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEA 395

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDM 442
           + L +++    L PD F++++ + A   +GSL+   QIH ++I +   ++  + ++++ M
Sbjct: 396 ITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHM 455

Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
           Y++ G    +  +F+++  K V+ WN+MI G+  +G    A+ +F +M  N L+ +E TF
Sbjct: 456 YARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTF 515

Query: 503 LTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           ++ + ACS  G +++G W+H  L+   YG+   I     +TD+  + GDL+   +  +SM
Sbjct: 516 VSVLTACSVSGLVDEG-WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 206/423 (48%), Gaps = 13/423 (3%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFF 76
           H  ++  GL +D      L+  YA++G +  +  VFD     D   W +++  Y+ N   
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLG 189

Query: 77  EESILLYHKM---IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             ++  + +M   +  Q      I  + L AC        G+++HG +I+ G ++D  + 
Sbjct: 190 SLALACFQEMHDALEVQHDSVGII--AALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVG 247

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           TS+L  Y + G +  AR VF  M  R VV+W+ +I  Y  N    E    F  M  EG++
Sbjct: 248 TSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQ 307

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
            + VT ++L  AC +  S    RS+HG+V+RR+      L  + + MY K G + S+E+ 
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
           F KI  +   SW  MI+ Y     + +A+  F+++L     P+  T+ TV+ +   LG L
Sbjct: 368 FGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSL 427

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           R  + +H  II  G   E   +  A++  YA  G +    ++   +  ++++SWN +I  
Sbjct: 428 RHCRQIHSYIIGLGYA-ENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMG 486

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG-------LQIHGHVI 426
           YA  G  K ALE+  +M+  GL P+  +  S L+AC   G +  G       LQ +G + 
Sbjct: 487 YAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIP 546

Query: 427 KID 429
           +I+
Sbjct: 547 QIE 549



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 172/345 (49%), Gaps = 2/345 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H +++  GL  D    T L++ Y + G +  +R VF T        W  +I  Y  N  
Sbjct: 231 IHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER 290

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            +E+   + +M  E   +      ++L AC+       G  VHG +++  F    V++T+
Sbjct: 291 PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETA 350

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  YG+ G ++ + K+F K+ ++ +VSW+++IA+Y      +E + +F  ++ + + PD
Sbjct: 351 LLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPD 410

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           + TM ++  A   L SLR  R IH +++      +  + N+ + MY++ GD++++   F 
Sbjct: 411 YFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFD 470

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+  +   SW  MI  Y   G  + ALE F +M     +PN  T ++VL +C+  G + E
Sbjct: 471 KMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDE 530

Query: 316 G-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           G    +  +   GM P+ ++ G  + +     G + E  + I ++
Sbjct: 531 GWMHFNLMLQEYGMIPQIEHYG-CMTDLLGREGDLREVLQFIESM 574



 Score = 39.7 bits (91), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 51/114 (44%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P F    +LR   ++H++++  G   +      ++  YA  G + +SR +FD     D 
Sbjct: 418 VPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDV 477

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             W  +I  Y  +   + ++ ++ +M       +   + SVL ACS  G +  G
Sbjct: 478 ISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 189/560 (33%), Positives = 297/560 (53%), Gaps = 50/560 (8%)

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
           G  GN  + +Y+K  +L  A + F +I +    SWT +IS + R G     L  F KM +
Sbjct: 321 GIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQD 380

Query: 291 VKEEPNLITLITVLGSCA-GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
               PN  TL  VL SC+  +   R GK +H  I+R G+  +   L  +++++Y +C   
Sbjct: 381 QGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLD-AVLNNSILDYYVKCRCF 439

Query: 350 SECEKVIHAIGERNILSWNMLISEY-------------------------------ARKG 378
              EK+   + E++ +SWN+++S Y                                R G
Sbjct: 440 GYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNG 499

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQS 437
             + ALELL +M   G   +  + + +L    ++  L LG QIH  V+K+   D+ FV++
Sbjct: 500 CERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRN 559

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVM---------------WNSMICGFYQNGNSLE 482
           SLIDMY KCG    A ++F+ + Q+S +M               W+SM+ G+ QNG   +
Sbjct: 560 SLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFED 619

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
           A+  F  M  + +E+D+ T  + + AC++ G LE G+ VH  +   G   D+++ +++ D
Sbjct: 620 ALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIID 679

Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
           MY KCG L  A  +F+   +RNVV W++MI    +HGQ  +A  LF+ M++ GI PNEV+
Sbjct: 680 MYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVS 739

Query: 603 FMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           F+ +L ACSH+G +EEG  YF  MR ++G+ P  +H+ CMVDL  R+G +    + IH+ 
Sbjct: 740 FVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNN 799

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
                 S+W + L+ CR+HK I++   + K+L      D G Y L S+I A E  W+E  
Sbjct: 800 AISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAA 859

Query: 722 KVRSIMEVTGLKKVPGYSTI 741
           K+RS+M+  G+KK P  S I
Sbjct: 860 KIRSLMQQRGVKKNPSQSWI 879



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 229/497 (46%), Gaps = 54/497 (10%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           F    N      LHA L+  G          L+  YA+  +L  +  +F+   + D F W
Sbjct: 298 FSDSMNYPNSEVLHAKLIKNGC--VGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSW 355

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS-LGDLGSGEKVHGRII 122
            VLI  +       + + L+ KM  +    + F    VL++CSS + D   G+ +HG I+
Sbjct: 356 TVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWIL 415

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           + G D D V+  SIL  Y +  C   A K+F  M  +D VSW+ +++SY    D+ + + 
Sbjct: 416 RNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVD 475

Query: 183 MFHSM---------------VREGVEPDFVTMLSLAEACG----------------ELCS 211
           +F  +               +R G E   + +L    A G                 L  
Sbjct: 476 LFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSV 535

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL---------LSAERTFVKIEKRC- 261
           L   + IH  VL+  +  DG + NS I MY KCG++         L  E + +  E+ C 
Sbjct: 536 LGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCD 595

Query: 262 -----TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
                + SW++M+S Y ++G F+ AL++F  M+  + E +  TL +V+ +CA  G L  G
Sbjct: 596 DAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELG 655

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           + VH  I + G G +  +LG ++I+ Y +CG +++   + +   +RN++ W  +IS  A 
Sbjct: 656 RQVHGYIQKIGHGLDV-FLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCAL 714

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKDE 433
            G  +EA+ L   M   G+ P+  S    L+AC + G L+ G    ++   V  I    E
Sbjct: 715 HGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAE 774

Query: 434 FVQSSLIDMYSKCGFKN 450
              + ++D+Y + G  N
Sbjct: 775 HF-TCMVDLYGRAGRLN 790



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 201/411 (48%), Gaps = 54/411 (13%)

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           +H ++I+ G        G  L+  YA+   + +  K+   I + ++ SW +LIS +AR G
Sbjct: 310 LHAKLIKNGC---VGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIG 366

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACG-NVGSLQLGLQIHGHVIK--IDCKDEFV 435
           +S + L L  +MQ  G+ P+ F+++  L +C  NV   ++G  IHG +++  +D  D  +
Sbjct: 367 LSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDL-DAVL 425

Query: 436 QSSLIDMYSKC---GFKNL------------------AYL----------LFERIQQKSV 464
            +S++D Y KC   G+                     +YL          LF ++  K  
Sbjct: 426 NNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDA 485

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
             WN+MI G  +NG    A+ L ++M       +++TF  A+   S++  L  GK +H +
Sbjct: 486 ASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQ 545

Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN---------------VVSWS 569
           ++  GV  D ++  +L DMY KCG+++ A  +F  + + +                VSWS
Sbjct: 546 VLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWS 605

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
           +M+  Y  +G+  DA   F  M+ S ++ ++ T  +++ AC+ +G +E G+     ++  
Sbjct: 606 SMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKI 665

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           G   D+   + ++D+  + G +  A+ +I +     N  +W ++++GC +H
Sbjct: 666 GHGLDVFLGSSIIDMYVKCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALH 715



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 160/343 (46%), Gaps = 25/343 (7%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           ++ SY ++G ++ S  +F      D+  W  +I   M N     ++ L +KM+      +
Sbjct: 460 MMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFN 519

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
              +   L   SSL  LG G+++H +++K G   D  ++ S++  Y + G ++ A  +F 
Sbjct: 520 KLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFK 579

Query: 155 KMTSR---------------DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
            +                  + VSWSS+++ Y  N    + LK F  M+   VE D  T+
Sbjct: 580 HLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTL 639

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
            S+  AC     L   R +HG++ +    +D  LG+S I MY KCG L  A   F + + 
Sbjct: 640 TSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKD 699

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           R    WT+MIS     G  ++A+  F  M+     PN ++ + VL +C+  G L EG   
Sbjct: 700 RNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG--- 756

Query: 320 HCQIIR-----KGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            C+  R      G+ P  ++    +++ Y   G+++E ++ IH
Sbjct: 757 -CKYFRLMREVYGIRPGAEHF-TCMVDLYGRAGRLNEIKEFIH 797



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 4/170 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H ++   G   D    + +I+ Y + GSL  + L+F+  K+ +  +W  +I     + 
Sbjct: 657 QVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHG 716

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK--CGFDKDDVI 132
              E++ L+  MI E  T +   +  VL ACS  G L  G K + R+++   G       
Sbjct: 717 QGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCK-YFRLMREVYGIRPGAEH 775

Query: 133 QTSILCTYGEFGCLDDARK-VFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
            T ++  YG  G L++ ++ + +   S+    W S ++S   + ++  G+
Sbjct: 776 FTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGI 825


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 198/582 (34%), Positives = 305/582 (52%), Gaps = 46/582 (7%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLGN--SFIVMYSKCGDLLSAERTFVK 256
           LSL   C  L SLR    IH  +++  +   +  L     F V+      L  A   F  
Sbjct: 6   LSLLHNCKTLQSLR---IIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           I++     W  M   +  S     AL  +V M+ +   PN  T   +L +CA     REG
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122

Query: 317 KSVHCQIIRKG-----------------------------MGPEYDYLG-PALIEFYAEC 346
           + +H  +++ G                                  D +   ALI+ YA  
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G +   +K+   I  ++++SWN LIS YA  G  KEALEL  +M    + PD  ++ + L
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242

Query: 407 SACGNVGSLQLGLQIHG----HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
           SAC    S++LG Q+H     H    + K   + ++LID+Y KCG    A  LFE +  K
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLK---IVNALIDLYIKCGEVETASGLFEGLSYK 299

Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            V+ WN++I G+       EA+ LF +M  +    +EVT L+ + AC+++G ++ G+W+H
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIH 359

Query: 523 HKLISY--GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
             +     GV     + T+L DMYAKCGD++ AQ+VFDSM  R++ SW+AMI  + MHG+
Sbjct: 360 VYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGR 419

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYA 639
            N A  +F +M   GI+P+++TF+ +L ACSHSG ++ G+  F +M   + + P L+HY 
Sbjct: 420 ANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYG 479

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
           CM+DLL  SG  + A +MI+SM    +G IW +LL  C++H  +++ ++  + L      
Sbjct: 480 CMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPK 539

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++G Y LLSNIYA  G W+E  K R+++   G+KKVPG S+I
Sbjct: 540 NSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSI 581



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 253/518 (48%), Gaps = 40/518 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYA---EMGSLRSSRLVFDTFKE 57
           + L  +C  L+ L  +HA ++ TGLH    A ++LIE          L  +  VFD+ +E
Sbjct: 6   LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           P+  +W  + + +  ++    ++ LY  MI      +++ +P +L+AC+       G+++
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR------------------ 159
           HG ++K G D D  + TS++  Y + G  +DARKVFD+ + R                  
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185

Query: 160 -------------DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
                        DVVSW+++I+ Y +  +  E L++F  M++  V+PD  TM+++  AC
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
            +  S+   R +H  +       +  + N+ I +Y KCG++ +A   F  +  +   SW 
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWN 305

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
            +I  Y     +++AL  F +ML   E PN +T++++L +CA LG +  G+ +H  I ++
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKR 365

Query: 327 GMG-PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
             G      L  +LI+ YA+CG +   ++V  ++  R++ SWN +I  +A  G +  A +
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFD 425

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---KIDCKDEFVQSSLIDM 442
           +  +M+  G+ PD  +    LSAC + G L LG  I   +    KI  K E     +ID+
Sbjct: 426 IFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHY-GCMIDL 484

Query: 443 YSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
               G FK    ++         V+W S++     +GN
Sbjct: 485 LGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGN 522



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 201/424 (47%), Gaps = 36/424 (8%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H D  + T LI+ YA  G + S++ +FD     D   W  LI  Y     ++E++ L+ +
Sbjct: 166 HRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKE 225

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M++           +VL AC+    +  G +VH  I   GF  +  I  +++  Y + G 
Sbjct: 226 MMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           ++ A  +F+ ++ +DV+SW+++I  Y       E L +F  M+R G  P+ VTMLS+  A
Sbjct: 286 VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPA 345

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGP--LGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           C  L ++   R IH ++ +R   +  P  L  S I MY+KCGD+ +A++ F  +  R  +
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW AMI  +   G    A + F +M +   EP+ IT + +L +C+  G L  G+      
Sbjct: 406 SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRH----- 460

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I + M  +Y  + P L E Y  C                       +I      G+ KEA
Sbjct: 461 IFRSMTEDYK-ITPKL-EHYG-C-----------------------MIDLLGHSGLFKEA 494

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
            E++  M+   + PD     S L AC   G+++LG     ++IKI+ K+      L ++Y
Sbjct: 495 EEMINSME---MDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIY 551

Query: 444 SKCG 447
           +  G
Sbjct: 552 ATAG 555


>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 985

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 195/652 (29%), Positives = 332/652 (50%), Gaps = 15/652 (2%)

Query: 101 VLRACSSLGDLGSGEKVHGRII---KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           +L+ C     L    ++H  ++        K   +  +I+  Y   G L+DA +VFDKM 
Sbjct: 285 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMP 344

Query: 158 SRDVVSWSSIIASYFDNADVSE-----GLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
            R  VS+++++A+Y   + VSE        ++  M   G+ P  +T+ SL +A      L
Sbjct: 345 QRTHVSYNALLAAY---SRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGDL 401

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
                +H   L+     D  +  S + MYS C DL SAE  F  + +R   +W ++I  Y
Sbjct: 402 LIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGY 461

Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
            ++   +K +  F++M+ V   P + T   +L +C+ L     G+ +H ++I   + P+ 
Sbjct: 462 LKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDL 521

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            +L  AL++ Y   G       +   + + +++SWN +IS Y      ++A+ L VQ++ 
Sbjct: 522 -HLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKA 580

Query: 393 WGL-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKN 450
                PD ++ A  +SA G       G  +HG VIK    +  FV S+L+ MY K     
Sbjct: 581 LCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETE 640

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F  I  K  ++W  MI G+ +  + + AI  F +M+    E+D+      +  C+
Sbjct: 641 AALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCA 700

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +  L +G+ +H      G   ++ +  +L DMYAK G+L+ A  VF  +S  ++  W++
Sbjct: 701 YLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNS 760

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
           M+  +  HG ++DA  LF++++  G+ P++VTF+++L ACSHS  VE+GK  +N M   G
Sbjct: 761 MLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIG 820

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF-PANGSIWGALLNGCRIHKRIDVMKTI 689
           + P  +HY+CMV LLSR+  +E A ++I+  P+   N  +W  LL+ C I+K + V    
Sbjct: 821 LVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRA 880

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +E+      D     LLSN+YA  G WDE  ++R  M+   ++K PG S I
Sbjct: 881 AEEVLRFNAEDGPTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPGLSWI 932



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 161/579 (27%), Positives = 270/579 (46%), Gaps = 14/579 (2%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPAS---TRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           R  T+L++  +LHA LL T       ++     +I  Y+  GSL  +  VFD   +    
Sbjct: 290 RITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMPQRTHV 349

Query: 62  MWAVLIKCYMWNNFFEESIL----LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +  L+  Y  +   E+  +    LY +M       SN    S+L+A S  GDL  G  +
Sbjct: 350 SYNALLAAY--SRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLL 407

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H + +K GF  D  +QTS+L  Y     L  A  VF  M  RD V+W+S+I  Y  N  +
Sbjct: 408 HAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKI 467

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            +G+ +F  M+  G  P   T   +  AC  L      R IH  V+   +  D  L N+ 
Sbjct: 468 EKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNAL 527

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEPN 296
           + MY   GD  +A   F ++EK    SW +MIS Y  +   +KA+  FV++  +   +P+
Sbjct: 528 VDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPD 587

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T   ++ +         GK +H Q+I+ G      ++G  L+  Y +  +     +V 
Sbjct: 588 DYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSV-FVGSTLVSMYFKNQETEAALRVF 646

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
            +I  ++ + W  +I+ Y++      A+    +M       D + ++  LS C  +  L+
Sbjct: 647 CSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILR 706

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G  IH +  K+    E  V  SLIDMY+K G    AYL+F ++    +  WNSM+ GF 
Sbjct: 707 QGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFS 766

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
            +G   +A+ LF ++    L  D+VTFL+ + ACS+   +E+GK + + + S G+     
Sbjct: 767 HHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPK 826

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAMI 572
             + +  + ++   L+ A+ + +     E NV  W  ++
Sbjct: 827 HYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLL 865


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 196/657 (29%), Positives = 330/657 (50%), Gaps = 17/657 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD--ARKVFDK 155
           Y  +LR+C++L  + +   VH  I +        ++ S+L  Y   G      A ++ D+
Sbjct: 5   YLDLLRSCTALPHVAA---VHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDE 61

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRP 214
           M  R+ VS++ +I+SY         L+ F       G+  D  T  +   AC     LR 
Sbjct: 62  MPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRT 121

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            +++H   +   +     L NS   MY+ CG++  A R F   E+    SW +++S Y R
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVR 181

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCA-GLGWLRE-GKSVHCQIIRKGMGPEY 332
           +G  ++ L+ F  M       N   L +++  CA G    R   ++VH  +++ G+  + 
Sbjct: 182 AGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADL 241

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR------KGMSKEALEL 386
            +L  A+I+ YA+ G ++    +  ++ + N++ +N +I+ + R      K +S+EAL L
Sbjct: 242 -FLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSL 300

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSK 445
             +MQ+ G+ P  F+ +S L AC   G    G QIHG V+K     D+++ S+LID+YS 
Sbjct: 301 YSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSD 360

Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
            G     Y  F  + ++ +V W SMI G  QN    +A+ LF +     L+ D  T  + 
Sbjct: 361 SGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSV 420

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           + AC+++     G+ +    I YG  +   +  +   M A+ GD+    R F  M  R+V
Sbjct: 421 MNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDV 480

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           VSWSA+I  +  HG   DA  +F +M+++ + PNEVTF+N+L ACSH G V++G  Y+  
Sbjct: 481 VSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEI 540

Query: 626 MRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M+  +G+ P ++H  C+VDLL R+G +  A   I    F  +  +W +LL  CRIH  ++
Sbjct: 541 MKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDME 600

Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             + +  ++       +  Y +L N+Y + G      K R +M+  G+KK PG S I
Sbjct: 601 RGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWI 657



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 159/627 (25%), Positives = 298/627 (47%), Gaps = 27/627 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPAS----TRLIESYAEMG---SLRSSRLVFD 53
           + L RSCT L  +  +HAH+        P AS      L+ +Y  +G    L ++RL+ D
Sbjct: 6   LDLLRSCTALPHVAAVHAHIA----RAHPTASLFLRNSLLAAYCRLGVGAPLHAARLI-D 60

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLG 112
                ++  + +LI  Y        ++  + +        +  F Y + L ACS   DL 
Sbjct: 61  EMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLR 120

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           +G+ VH   +  G      +  S+   Y   G + +AR+VFD     D VSW+S+++ Y 
Sbjct: 121 TGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYV 180

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC--GELCSLRPARSIHGHVLRRKIKID 230
                 E LK+F  M   G+  +   + S+ + C  G       A ++HG V++  +  D
Sbjct: 181 RAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDAD 240

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF------QKALES 284
             L ++ I MY+K G L +A   F  +       + AMI+ + R          ++AL  
Sbjct: 241 LFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSL 300

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           + +M     +P+  T  ++L +C   G    GK +H Q+++     + DY+G ALI+ Y+
Sbjct: 301 YSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDD-DYIGSALIDLYS 359

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           + G M +  +   ++ +++I++W  +IS   +  + ++AL L  +   +GL PD F+++S
Sbjct: 360 DSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSS 419

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            ++AC ++   + G QI    IK    +   + +S I M ++ G  +     F+ ++ + 
Sbjct: 420 VMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRD 479

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVH 522
           VV W+++I    Q+G + +A+ +F++M    +  +EVTFL  + ACS+ G ++ G ++  
Sbjct: 480 VVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYE 539

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR-VFDSMSERNVVSWSAMIDCYGMHGQL 581
                YG+   I   T + D+  + G L  A+  + DS    + V W +++    +HG +
Sbjct: 540 IMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDM 599

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILW 608
                +  Q++D  ++P       IL+
Sbjct: 600 ERGQLVADQIMD--LEPTSSASYVILY 624



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 155/391 (39%), Gaps = 75/391 (19%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +L    H D    + LI+ Y++ G +      F +  + D   W  +I   + N 
Sbjct: 334 QIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNE 393

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            FE+++ L+ + I        F   SV+ AC+SL    +GE++    IK GF++   +  
Sbjct: 394 LFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGN 453

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S +      G +D   + F +M SRDVVSWS++I+S+  +    + L++F+ M+   V P
Sbjct: 454 SFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAP 513

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF------------IVMYS 242
           + VT L++  AC            HG ++   ++    + N +            + +  
Sbjct: 514 NEVTFLNVLTACS-----------HGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLG 562

Query: 243 KCGDLLSAERTFVK------------------------------------IEKRCTTSWT 266
           + G L  AE  F++                                    +E   + S+ 
Sbjct: 563 RAGRLADAE-AFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYV 621

Query: 267 AMISCYNRSGWFQKALESFVKMLE--VKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
            + + Y  +G    A ++   M E  VK+EP             GL W+     VH  + 
Sbjct: 622 ILYNMYLDAGELSLASKTRDLMKERGVKKEP-------------GLSWIELRSGVHSFVA 668

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
                PE + +   L E  ++  K++  +  
Sbjct: 669 GDKSHPESNAIYKKLAEMLSKIEKLANTDNA 699


>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
 gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 183/513 (35%), Positives = 290/513 (56%), Gaps = 5/513 (0%)

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV- 291
           L    +  Y + G    A   F ++ +R   +WT MIS Y     + +A   FV M++  
Sbjct: 46  LATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNG 105

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG-KMS 350
            + PN  T+ +VL +C G+  +  G+ VH   I++     + Y+  AL++ YA CG  M 
Sbjct: 106 NDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMR 165

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +   V H I E+N++SW  LI+ Y  +G    AL++  +M   G+  +  S++ ++ AC 
Sbjct: 166 DACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACA 225

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
           ++GS   G QIH  VIK   + +  V +S++DMY +CG  + A   F  + +K ++ WN+
Sbjct: 226 SIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNT 285

Query: 470 MICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG 529
           +I G Y+  +S+E   +F QM       +  TF + + AC+N   L+ G+ VH  +   G
Sbjct: 286 LIAG-YERSDSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRG 344

Query: 530 VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
           +  ++ +  AL DMYAKCG++  +Q+ F  MS  N+VSW++M+  YG HG   +A  LF 
Sbjct: 345 LDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFD 404

Query: 590 QMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRS 648
           +M+ SGI+P++V FM +L ACSH+G V++G  Y N M   + ++P+ + Y C+VDLL R 
Sbjct: 405 EMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRP 464

Query: 649 GDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLS 708
           G +E A+++I SMPF A+ S+WGALL  C+ H    + K   K+      N    Y +LS
Sbjct: 465 GRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYVMLS 524

Query: 709 NIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           NIYA EG W E  ++R +M+  G +KV G S I
Sbjct: 525 NIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWI 557



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 238/440 (54%), Gaps = 17/440 (3%)

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           ++ T +L +Y E G    AR +FD+M  RDVV+W+++I+ Y    + ++   +F  MV+ 
Sbjct: 45  ILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKN 104

Query: 191 GVE-PDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-----IKIDGPLGNSFIVMYSKC 244
           G + P+  T+ S+ +AC  +  +   R +HG  ++R+     I +D    N+ + MY+ C
Sbjct: 105 GNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVD----NALMDMYASC 160

Query: 245 G-DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           G  +  A   F  I+++   SWT +I+ Y   G   +AL+ F +ML      N  ++   
Sbjct: 161 GVGMRDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIA 220

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           + +CA +G    G+ +H  +I+ G   +   +  ++++ Y  CG +SE  K  + + E++
Sbjct: 221 VRACASIGSQNFGRQIHTAVIKHGFESDLP-VTNSILDMYCRCGCLSEANKYFNDMTEKD 279

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
           +++WN LI+ Y R   S E   +  QM++ G  P+ F+  S ++AC N  +LQ G Q+HG
Sbjct: 280 LITWNTLIAGYERSD-SIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHG 338

Query: 424 HVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
            + +  +D   E   ++LIDMY+KCG    +   F  +   ++V W SM+ G+  +G   
Sbjct: 339 GIFRRGLDGNLELA-NALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGK 397

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTAL 540
           EA+ LF +M  + +  D+V F+  + ACS+ G +++G ++++  +  Y ++ +  I   +
Sbjct: 398 EAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCV 457

Query: 541 TDMYAKCGDLQTAQRVFDSM 560
            D+  + G ++ A ++  SM
Sbjct: 458 VDLLGRPGRVEDAYQLIRSM 477



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 216/439 (49%), Gaps = 19/439 (4%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           +T L++SY E G    +R +FD   E D   W  +I  Y   N + ++  ++  M++   
Sbjct: 47  ATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGN 106

Query: 92  TISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQTSILCTYGEFGC-LDD 148
              N F   SVL+AC  +  +  G  VHG  IK  F +  + +  +++  Y   G  + D
Sbjct: 107 DPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRD 166

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A  VF  +  ++VVSW+++IA Y    + +  L++F  M+ +GV  +  ++     AC  
Sbjct: 167 ACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACAS 226

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAM 268
           + S    R IH  V++   + D P+ NS + MY +CG L  A + F  + ++   +W  +
Sbjct: 227 IGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTL 286

Query: 269 ISCYNRSGWFQKALESFVKMLEVKEE---PNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
           I+ Y RS     ++E F    +++ E   PN  T  +++ +CA    L+ G+ VH  I R
Sbjct: 287 IAGYERS----DSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFR 342

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
           +G+    + L  ALI+ YA+CG + + +K    +   N++SW  ++  Y   G  KEA+E
Sbjct: 343 RGLDGNLE-LANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVE 401

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ-----IHGHVIKIDCKDEFVQSSLI 440
           L  +M   G+ PD     + L AC + G +  GL+     I+ + IK    ++ +   ++
Sbjct: 402 LFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIK---PNQEIYGCVV 458

Query: 441 DMYSKCGFKNLAYLLFERI 459
           D+  + G    AY L   +
Sbjct: 459 DLLGRPGRVEDAYQLIRSM 477



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 71/162 (43%), Gaps = 10/162 (6%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +   GL  +   +  LI+ YA+ G++  S+  F      +   W  ++  Y  + 
Sbjct: 335 QVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHG 394

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD-----KD 129
           + +E++ L+ +M+R        ++ +VL ACS  G +  G     R I C  +      +
Sbjct: 395 YGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGL----RYINCMINDYHIKPN 450

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIAS 170
             I   ++   G  G ++DA ++   M    D   W +++ +
Sbjct: 451 QEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGA 492


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 187/617 (30%), Positives = 322/617 (52%), Gaps = 12/617 (1%)

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S++ ++   G +DDA++      SRD    + +I    D       L  + +M+  G  P
Sbjct: 47  SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERT 253
           D  T   + + C  L +L   R+ H   +R  +   D   GNS +  Y++ G +  AER 
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGW 312
           F  +  R   +W +M+  Y  +G    AL  F +M E  E + + + +I  L +C     
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESA 226

Query: 313 LREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
           L +G+ VH  +IR GM  E+D  +G ++++ Y +CG ++  E V   +  R +++WN +I
Sbjct: 227 LMQGREVHAYVIRHGM--EHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
             YA     +EA +  VQM+  G   +  +  + L+AC    S   G  +HG++ +    
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344

Query: 432 DEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
              V +++L++MYSK G    +  +F ++  K++V WN+MI  +      +EAI LF  +
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               L  D  T    + A   +G L + + +H  +I  G  ++  I  A+  MYA+CGD+
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDV 464

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
            +++ +FD M+ ++V+SW+ MI  Y +HGQ   A  +F +M  +G++PNE TF+++L AC
Sbjct: 465 LSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTAC 524

Query: 611 SHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           S SG  +EG   FN+M R +G+ P ++HY CM DLL R+GD++   + I +MP      +
Sbjct: 525 SVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRV 584

Query: 670 WGALLNGCRIHKRIDVM-----KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
           WG+LL   R    ID+      +  + E      ++ G Y L+S++YA+ G W +  +++
Sbjct: 585 WGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIK 644

Query: 725 SIMEVTGLKKVPGYSTI 741
           S+ME  GL++    S +
Sbjct: 645 SLMEEKGLRRTDPRSIV 661



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 187/382 (48%), Gaps = 6/382 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY---HKMIREQA 91
           L+  YA +G +  +  VFD     D   W  ++  Y+ N     +++ +   H+ +  Q 
Sbjct: 150 LLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQH 209

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
                I  + L AC     L  G +VH  +I+ G + D  + TSIL  Y + G +  A  
Sbjct: 210 DGVGII--AALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEG 267

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VF  M SR VV+W+ +I  Y  N    E    F  M  EG + + VT ++L  AC +  S
Sbjct: 268 VFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTES 327

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
               RS+HG++ RR+      L  + + MYSK G + S+E+ F ++  +   SW  MI+ 
Sbjct: 328 SLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAA 387

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y     + +A+  F+ +L     P+  T+  V+ +   LG LR+ + +H  IIR G G E
Sbjct: 388 YMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYG-E 446

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +  A++  YA CG +    ++   +  ++++SWN +I  YA  G  + ALE+  +M+
Sbjct: 447 NTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMK 506

Query: 392 TWGLMPDSFSVASSLSACGNVG 413
             GL P+  +  S L+AC   G
Sbjct: 507 CNGLRPNESTFVSVLTACSVSG 528



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 169/342 (49%), Gaps = 2/342 (0%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HA+++  G+ +D    T +++ Y + G + S+  VF T        W  +I  Y  N  
Sbjct: 233 VHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNER 292

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
            EE+   + +M  E   +      ++L AC+       G  VHG I +  F    V++T+
Sbjct: 293 PEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETA 352

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L  Y + G +  + KVF +MT++ +VSW+++IA+Y       E + +F  ++ + + PD
Sbjct: 353 LLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPD 412

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           + TM ++  A   L  LR  R +H +++R     +  + N+ + MY++CGD+LS+   F 
Sbjct: 413 YFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFD 472

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           K+  +   SW  MI  Y   G  + ALE F +M      PN  T ++VL +C+  G   E
Sbjct: 473 KMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDE 532

Query: 316 GKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           G +    + R  GM P+ ++ G  + +     G + E  + I
Sbjct: 533 GWTQFNSMQRDYGMIPQIEHYG-CMTDLLGRAGDLKEVMQFI 573



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 48/109 (44%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P F     LR+  ++H++++  G   +      ++  YA  G + SSR +FD     D 
Sbjct: 420 VPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDV 479

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W  +I  Y  +     ++ ++ +M       +   + SVL ACS  G
Sbjct: 480 ISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSG 528


>gi|302782183|ref|XP_002972865.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
 gi|300159466|gb|EFJ26086.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
          Length = 597

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/580 (31%), Positives = 305/580 (52%), Gaps = 18/580 (3%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H  I + G      +   I+  YG+ G +DDA  VF  + +R+V SW+ IIA++  N  
Sbjct: 1   LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGH 60

Query: 177 VSEGLKMFHSMVREGVEPDFV-TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
               + +F  M+RE  EP  + T ++   A  +L +L   R IH   +   ++ D  +G 
Sbjct: 61  PERSVALFWRMIRE--EPGIIPTRITFLHALEKLKNLAEGRKIHELAITVGLESDPAVGT 118

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + + MY K   L  A+R F ++++R   +WTA+I+ Y ++G  ++AL+ +  M      P
Sbjct: 119 AIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVAP 178

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           N  T   V+ +CA LG L  G ++H +I   G+   +  +  +LI  Y  C ++ + E++
Sbjct: 179 NQYTFTIVIDACAELGRLDVGIAIHARITAAGL-ESWIEVANSLINLYGNCKRLRDAERI 237

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP-DSFSVASSLSACGNVGS 414
              +  R+ +SWN +I+ YA  G   +A++L  +M+  G +  D  +  + L AC +   
Sbjct: 238 FQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQED 297

Query: 415 LQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L  G  IH   I        V  S+ + MY +CG    +   FER++ K  V W+++I  
Sbjct: 298 LAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAA 357

Query: 474 FYQNGNSLEAINLFHQM-YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
             QNG S  A++ + +M + +    +E TF++ ++ACS     ++G  +H  ++  G+  
Sbjct: 358 LAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFA---DEGIKIHQHIVDSGIVH 414

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSM-------SERNVVSWSAMIDCYGMHGQLNDAA 585
              I TA+ +MYAKCG L  A+ +F SM          N VSW  MI     HG +++A 
Sbjct: 415 STMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEAL 474

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDL 644
            LF++M   G KP+E+ F++IL  CSHSG++E+G  +F AM +  G+ P ++HY C++DL
Sbjct: 475 ELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGLGHFLAMIQDHGLAPRVEHYGCLIDL 534

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           L R G ++ A  ++  MPF  +   W   L  CR+H   D
Sbjct: 535 LGRGGHLDLAQDLVDQMPFEPDARAWSNFLGSCRLHSDRD 574



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 279/568 (49%), Gaps = 23/568 (4%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           S  +++ Y + GS+  + +VF + +  + F W ++I  +  N   E S+ L+ +MIRE+ 
Sbjct: 17  SNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVALFWRMIREEP 76

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
            I      + L A   L +L  G K+H   I  G + D  + T+I+  YG+   L DA++
Sbjct: 77  GIIP-TRITFLHALEKLKNLAEGRKIHELAITVGLESDPAVGTAIVTMYGKSRSLADAKR 135

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VFD++  RDVV+W+++I +Y  N    E L ++ SM  +GV P+  T   + +AC EL  
Sbjct: 136 VFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVAPNQYTFTIVIDACAELGR 195

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L    +IH  +    ++    + NS I +Y  C  L  AER F ++ +R + SW +MI+ 
Sbjct: 196 LDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERIFQRMPRRSSVSWNSMIAA 255

Query: 272 YNRSGWFQKALESFVKML---EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
           Y  +G    A++ + +M     VK +P  +T + VLG+C     L  G+S+H   I +G+
Sbjct: 256 YAHNGHPGDAIDLYKRMRGDGSVKLDP--VTFVNVLGACYSQEDLAAGRSIHRDAIARGL 313

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
           G     L  A +  Y  CG + E       +  ++ ++W+ +I+  A+ G S  AL    
Sbjct: 314 GSHL-VLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAALAQNGESSSALHFYR 372

Query: 389 QMQTW--GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
           +M  W     P+  +  S L AC        G++IH H++         + +++ +MY+K
Sbjct: 373 RM-IWSSSARPNEATFISVLEACSFADE---GIKIHQHIVDSGIVHSTMISTAIFNMYAK 428

Query: 446 CGFKNLAYLLFERI-------QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           CG  + A  +F  +       Q  + V W +MI    ++G+  EA+ LF +M L   +  
Sbjct: 429 CGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEALELFREMRLEGGKPS 488

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           E+ F++ +  CS+ G +E+G      +I  +G+   +     L D+  + G L  AQ + 
Sbjct: 489 EIVFISILHGCSHSGTMEQGLGHFLAMIQDHGLAPRVEHYGCLIDLLGRGGHLDLAQDLV 548

Query: 558 DSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
           D M  E +  +WS  +    +H   + A
Sbjct: 549 DQMPFEPDARAWSNFLGSCRLHSDRDRA 576



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 28/494 (5%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL +  ++H   +  GL  DP   T ++  Y +  SL  ++ VFD  K  D   W  LI 
Sbjct: 94  NLAEGRKIHELAITVGLESDPAVGTAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALIT 153

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  N   EE++ LY  M  +    + + +  V+ AC+ LG L  G  +H RI   G + 
Sbjct: 154 AYTQNGHCEEALDLYSSMDPDGVAPNQYTFTIVIDACAELGRLDVGIAIHARITAAGLES 213

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
              +  S++  YG    L DA ++F +M  R  VSW+S+IA+Y  N    + + ++  M 
Sbjct: 214 WIEVANSLINLYGNCKRLRDAERIFQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMR 273

Query: 189 REG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
            +G V+ D VT +++  AC     L   RSIH   + R +     L ++ + MY +CG +
Sbjct: 274 GDGSVKLDPVTFVNVLGACYSQEDLAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSV 333

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGS 306
             +  TF ++E +   +W+A+I+   ++G    AL  + +M+      PN  T I+VL +
Sbjct: 334 EESMATFERMEIKDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEA 393

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI------- 359
           C+   +  EG  +H  I+  G+      +  A+   YA+CG++    ++  ++       
Sbjct: 394 CS---FADEGIKIHQHIVDSGI-VHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRGSF 449

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              N +SW  +IS  AR G   EALEL  +M+  G  P      S L  C + G+++ GL
Sbjct: 450 QSANDVSWMNMISALARHGSIDEALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGL 509

Query: 420 -------QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
                  Q HG   +++         LID+  + G  +LA  L +++  +     W++ +
Sbjct: 510 GHFLAMIQDHGLAPRVEH-----YGCLIDLLGRGGHLDLAQDLVDQMPFEPDARAWSNFL 564

Query: 472 --CGFYQNGNSLEA 483
             C  + + +  EA
Sbjct: 565 GSCRLHSDRDRAEA 578



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 9/179 (5%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFD------- 53
           + +  +C+   +  ++H H++ +G+ +    ST +   YA+ G L  +R +F        
Sbjct: 388 ISVLEACSFADEGIKIHQHIVDSGIVHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRG 447

Query: 54  TFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
           +F+  +   W  +I     +   +E++ L+ +M  E    S  ++ S+L  CS  G +  
Sbjct: 448 SFQSANDVSWMNMISALARHGSIDEALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQ 507

Query: 114 G-EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIAS 170
           G       I   G          ++   G  G LD A+ + D+M    D  +WS+ + S
Sbjct: 508 GLGHFLAMIQDHGLAPRVEHYGCLIDLLGRGGHLDLAQDLVDQMPFEPDARAWSNFLGS 566


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 206/651 (31%), Positives = 337/651 (51%), Gaps = 19/651 (2%)

Query: 104 ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTS--R 159
           A SS+    +G+ +HG  +K G      +  S++  Y       L  A  VF  + +  R
Sbjct: 23  AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLR 82

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVR--EGVEPDFVTMLSLAEACGELCSLRPARS 217
           DV SW+S++     +  ++  L  F SM+   + V P   +  ++  A   + S      
Sbjct: 83  DVASWNSLLNPLSRHQPLA-ALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAV 141

Query: 218 IHGHVLRRKIKIDGPLGNSFIV-----MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
            H      K+       N F+      MY K G +  A R F ++  R   SW AM+S Y
Sbjct: 142 AHAFAC--KLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGY 199

Query: 273 NRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
                 ++A E F  ML E   E N      VL + +    L  G  +H  +++ G+   
Sbjct: 200 ATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGL-VG 258

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           +  +  +L+  YA+   M     V  +  ERN ++W+ +I+ YA+ G +  A  + +QM 
Sbjct: 259 FVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMH 318

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKN 450
           + G  P  F+    L+A  ++G+L +G Q HG ++K+  + + +V+S+L+DMY+KCG   
Sbjct: 319 SAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTG 378

Query: 451 LAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            A   F ++     VV+W +MI G  QNG   EA+ L+ +M    +    +T  + ++AC
Sbjct: 379 DAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRAC 438

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           + +  LE GK +H +++  G      + TAL+ MY+KCG+L+ +  VF  M +R+++SW+
Sbjct: 439 ACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWN 498

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
           ++I  +  HG+  DA  LF++M   GI P+ +TF+N+L ACSH G V+ G FYF AM + 
Sbjct: 499 SIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKD 558

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           +G+ P L HYAC+VD+LSR+G ++ A   I S+       +W  +L  CR  +  DV   
Sbjct: 559 YGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAY 618

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
             ++L   GT D+  Y LLSNIYA +  W++  +VR +M + G+ K PG S
Sbjct: 619 AGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCS 669



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 202/389 (51%), Gaps = 3/389 (0%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           ST L+  Y ++G++  +R VFD     ++  WA ++  Y      EE+  L+  M++E  
Sbjct: 161 STALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECP 220

Query: 92  TISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
              N F+  +VL A S    L  G ++HG ++K G      ++ S++  Y +  C+D A 
Sbjct: 221 LEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAM 280

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            VF     R+ ++WS++I  Y  N +      MF  M   G  P   T + +  A  ++ 
Sbjct: 281 AVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMG 340

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWTAMI 269
           +L   +  HG +++   +    + ++ + MY+KCG    A+  F ++ +      WTAMI
Sbjct: 341 ALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMI 400

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
           + + ++G  ++AL  + +M +    P+ +T+ +VL +CA L  L  GK +H QI++ G G
Sbjct: 401 TGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFG 460

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
                +G AL   Y++CG + +   V   + +R+I+SWN +IS +++ G  ++AL+L  +
Sbjct: 461 LG-GSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEE 519

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           M+  G+ PD  +  + L AC ++G +  G
Sbjct: 520 MKLEGIAPDHITFINVLCACSHMGLVDRG 548



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 181/348 (52%), Gaps = 3/348 (0%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            +LH  +L  GL         L+  YA+   + ++  VF + KE +S  W+ +I  Y  N
Sbjct: 245 VQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQN 304

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
              + +  ++ +M     + + F +  +L A S +G L  G++ HG ++K GF++   ++
Sbjct: 305 GEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVK 364

Query: 134 TSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           ++++  Y + GC  DA+  F ++    DVV W+++I  +  N +  E L ++  M +EGV
Sbjct: 365 SALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGV 424

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P ++T+ S+  AC  L +L P + +H  +L+    + G +G +   MYSKCG+L  +  
Sbjct: 425 MPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMV 484

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F ++  R   SW ++IS +++ G  + AL+ F +M      P+ IT I VL +C+ +G 
Sbjct: 485 VFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGL 544

Query: 313 LREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +  G      + +  G+ P+ D+    +++  +  G++ E +  I +I
Sbjct: 545 VDRGWFYFRAMSKDYGLIPKLDHYA-CIVDILSRAGQLKEAKDFIESI 591


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 305/548 (55%), Gaps = 4/548 (0%)

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           D  T+  L +       L   + +H  ++R     +  L N F+ +YSKCG+L    + F
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            K+ +R   SWT++I+ +  +  FQ+AL SF +M    E      L +VL +C  LG ++
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G  VHC +++ G G E  ++G  L + Y++CG++S+  K    +  ++ + W  +I  +
Sbjct: 194 FGTQVHCLVVKCGFGCEL-FVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE- 433
            + G  K+AL   ++M T  +  D   + S+LSAC  + +   G  +H  ++K+  + E 
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFE-RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           F+ ++L DMYSK G    A  +F+      S+V   ++I G+ +     +A++ F  +  
Sbjct: 313 FIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR 372

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +E +E TF + I+AC+N  +LE G  +H +++ +  ++D ++ + L DMY KCG    
Sbjct: 373 RGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDH 432

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           + ++FD +   + ++W+ ++  +  HG   +A   F  M+  G+KPN VTF+N+L  CSH
Sbjct: 433 SIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSH 492

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G VE+G  YF++M +I+GV P  +HY+C++DLL R+G ++ A   I++MPF  N   W 
Sbjct: 493 AGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWC 552

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           + L  C+IH  ++  K    +L      ++G + LLSNIYA+E  W++   +R +++   
Sbjct: 553 SFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGN 612

Query: 732 LKKVPGYS 739
           + K+PGYS
Sbjct: 613 MNKLPGYS 620



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 249/480 (51%), Gaps = 7/480 (1%)

Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
           +L  G+++H  +I+ G   +  +    L  Y + G LD   K+FDKM+ R++VSW+SII 
Sbjct: 90  ELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIIT 149

Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
            +  N+   E L  F  M  EG       + S+ +AC  L +++    +H  V++     
Sbjct: 150 GFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGC 209

Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
           +  +G++   MYSKCG+L  A + F ++  +    WT+MI  + ++G F+KAL +++KM+
Sbjct: 210 ELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMV 269

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGK 348
                 +   L + L +C+ L     GKS+H  I++  +G EY+ ++G AL + Y++ G 
Sbjct: 270 TDDVFIDQHVLCSTLSACSALKASSFGKSLHATILK--LGFEYETFIGNALTDMYSKSGD 327

Query: 349 MSECEKVIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
           M     V     +  +I+S   +I  Y      ++AL   V ++  G+ P+ F+  S + 
Sbjct: 328 MVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIK 387

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           AC N   L+ G Q+HG V+K + K D FV S+L+DMY KCG  + +  LF+ I+    + 
Sbjct: 388 ACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIA 447

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKL 525
           WN+++  F Q+G    AI  F+ M    L+ + VTF+  ++ CS+ G +E G  +     
Sbjct: 448 WNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSME 507

Query: 526 ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
             YGV       + + D+  + G L+ A+   ++M  E NV  W + +    +HG +  A
Sbjct: 508 KIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA 567



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 218/442 (49%), Gaps = 6/442 (1%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L K  +LHA L+  G   +   S   +  Y++ G L  +  +FD   + +   W  +I  
Sbjct: 91  LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITG 150

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           +  N+ F+E++  + +M  E    + F   SVL+AC+SLG +  G +VH  ++KCGF  +
Sbjct: 151 FAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE 210

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             + +++   Y + G L DA K F++M  +D V W+S+I  +  N D  + L  +  MV 
Sbjct: 211 LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT 270

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           + V  D   + S   AC  L +    +S+H  +L+   + +  +GN+   MYSK GD++S
Sbjct: 271 DDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVS 330

Query: 250 AERTFVKIEKRCTT--SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
           A   F +I   C +  S TA+I  Y      +KAL +FV +     EPN  T  +++ +C
Sbjct: 331 ASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKAC 389

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           A    L  G  +H Q+++     +  ++   L++ Y +CG      ++   I   + ++W
Sbjct: 390 ANQAKLEHGSQLHGQVVKFNFKRD-PFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAW 448

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N L+  +++ G+ + A+E    M   GL P++ +  + L  C + G ++ GL     + K
Sbjct: 449 NTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEK 508

Query: 428 I--DCKDEFVQSSLIDMYSKCG 447
           I      E   S +ID+  + G
Sbjct: 509 IYGVVPKEEHYSCVIDLLGRAG 530



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 140/268 (52%), Gaps = 3/268 (1%)

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYL 454
           + D+ +VA  +        L  G Q+H  +I+  C  + F+ +  +++YSKCG  +    
Sbjct: 72  LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           LF+++ Q+++V W S+I GF  N    EA++ F QM +      +    + +QAC+++G 
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           ++ G  VH  ++  G   ++++ + LTDMY+KCG+L  A + F+ M  ++ V W++MID 
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDG 251

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
           +  +G    A + + +M+   +  ++    + L ACS   +   GK     +   G E +
Sbjct: 252 FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYE 311

Query: 635 LQHYACMVDLLSRSGDIEGAFKM--IHS 660
                 + D+ S+SGD+  A  +  IHS
Sbjct: 312 TFIGNALTDMYSKSGDMVSASNVFQIHS 339


>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240-like [Glycine max]
          Length = 563

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 184/557 (33%), Positives = 302/557 (54%), Gaps = 18/557 (3%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSF-IVMYSKCGDLLSAERTFV 255
           T+LSL   C    S+R  + +HG ++    IK   PL       + S+ GD+  A+    
Sbjct: 6   TILSLLAKCK---SMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLR 62

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +I       W +MI  +  S   + ++  + +M+E    P+  T   VL +C  +     
Sbjct: 63  QIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDC 122

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           GK +H  I++ G   +  Y    L+  Y  C  M    KV   I + N+++W  LI+ Y 
Sbjct: 123 GKCIHSCIVKSGFEAD-AYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYV 181

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
           +     EAL++   M  W + P+  ++ ++L AC +   +  G  +H  + K    D F+
Sbjct: 182 KNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAG-YDPFM 240

Query: 436 QSS---------LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
            +S         +++MY+KCG   +A  LF ++ Q+++V WNSMI  + Q     EA++L
Sbjct: 241 STSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDL 300

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           F  M+ + +  D+ TFL+ +  C++   L  G+ VH  L+  G+  DI + TAL DMYAK
Sbjct: 301 FFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAK 360

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNEVTFMN 605
            G+L  AQ++F S+ +++VV W++MI+   MHG  N+A S+F+ M  DS + P+ +T++ 
Sbjct: 361 TGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIG 420

Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L+ACSH G VEE K +F  M  ++G+ P  +HY CMVDLLSR+G    A +++ +M   
Sbjct: 421 VLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQ 480

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            N +IWGALLNGC+IH+ + V   ++  L       +G + LLSNIYA+ G W+E    R
Sbjct: 481 PNIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNVTR 540

Query: 725 SIMEVTGLKKVPGYSTI 741
            +M+   + K  G+S++
Sbjct: 541 KVMKHKRITKTIGHSSV 557



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 244/499 (48%), Gaps = 30/499 (6%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEP 58
           + L   C ++R+L +LH  ++ T         ++LI+    +E G +  + LV      P
Sbjct: 8   LSLLAKCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHNP 67

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
             ++W  +I+ ++ ++    S+LLY +MI    +  +F +P VL+AC  + D   G+ +H
Sbjct: 68  SVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIH 127

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             I+K GF+ D    T +L  Y     +    KVFD +   +VV+W+ +IA Y  N    
Sbjct: 128 SCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPY 187

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG------- 231
           E LK+F  M    VEP+ +TM++   AC     +   R +H  +  RK   D        
Sbjct: 188 EALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRI--RKAGYDPFMSTSNS 245

Query: 232 --PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
              L  + + MY+KCG L  A   F K+ +R   SW +MI+ YN+    Q+AL+ F  M 
Sbjct: 246 NIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMW 305

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
                P+  T ++VL  CA    L  G++VH  +++ G+  +   L  AL++ YA+ G++
Sbjct: 306 TSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDIS-LATALLDMYAKTGEL 364

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT-WGLMPDSFSVASSLSA 408
              +K+  ++ +++++ W  +I+  A  G   EAL +   MQ    L+PD  +    L A
Sbjct: 365 GNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFA 424

Query: 409 CGNVG-------SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQ 460
           C +VG         +L  +++G V     ++ +    ++D+ S+ G F+    L+     
Sbjct: 425 CSHVGLVEEAKKHFRLMTEMYGMV---PGREHY--GCMVDLLSRAGHFREAERLMETMTV 479

Query: 461 QKSVVMWNSMI--CGFYQN 477
           Q ++ +W +++  C  ++N
Sbjct: 480 QPNIAIWGALLNGCQIHEN 498


>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 723

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 210/653 (32%), Positives = 341/653 (52%), Gaps = 25/653 (3%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           F++P V +AC+ L  L  G           F+    +  SI   Y + G L    + FD 
Sbjct: 46  FVFPIVFKACAKLSWLLQG-----------FESYVSVGNSIADFYMKCGDLCSGLRAFDC 94

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M SRD VSW+ I+    D+    EGL  F  +   G EP+  T++ +  AC  L      
Sbjct: 95  MNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNVSTLVLVIHACRSL--WFDG 152

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             IHG+V+R        + NS + +YS+  D LSA + F ++ +R   SW+ +I  Y +S
Sbjct: 153 EKIHGYVIRSGFWRISSVQNSILCLYSEF-DSLSARKLFDEMSERDVISWSVVIRSYVQS 211

Query: 276 GWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
                 LE F +M+ E K EP+ +T+ +VL +CA L  +  G+SVH   IR+G      +
Sbjct: 212 QEPVLGLELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVF 271

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +LI+ Y++        +V      RNI+SWN +++ +       EALE+   M+   
Sbjct: 272 VRNSLIDMYSKGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEA 331

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           L  D  ++ S L  C           IHG +I+   + +E   SSL+D Y+ C   + A 
Sbjct: 332 LEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDAR 391

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            +F+ +  K VV  ++MI G  + G S EAI++F QM     + + +T ++ + ACS   
Sbjct: 392 TVFDSMSYKDVVSCSTMISGLGRCGRSDEAISIFCQMRD---KPNAITVISLLSACSVSA 448

Query: 514 QLEKGKWVHHKLISYGVR-KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
            L   KW H   I  G+   DI +DT++ D YAKCG +  A+R FD ++E+++VSW+ +I
Sbjct: 449 VLRTSKWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVII 508

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             Y ++G  + A + F +M      PN VT++  L AC+H G V++G   F +M     +
Sbjct: 509 SAYAINGLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQK 568

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALLNGC--RIHKRIDVMKT 688
           P LQHY+C+VD+LSR+G+I+ A ++I ++P    A  S WGA+L+GC  R+   I   + 
Sbjct: 569 PSLQHYSCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSGCRNRLKSGIITSEV 628

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + L +     +GY  L S+++A E +W +   +R +++   ++ V GYS +
Sbjct: 629 VAEVLELEPLCSSGYL-LASSVFAAEKSWVDVAMMRRLVKERNVRVVAGYSMV 680



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 174/566 (30%), Positives = 290/566 (51%), Gaps = 23/566 (4%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           +F++C  L          L+ G          + + Y + G L S    FD     DS  
Sbjct: 51  VFKACAKL--------SWLLQGFESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVS 102

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           W V++   + + F EE +  + K+     +  +S  +   V+ AC SL     GEK+HG 
Sbjct: 103 WNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNVSTLVL--VIHACRSL--WFDGEKIHGY 158

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           +I+ GF +   +Q SILC Y EF  L  ARK+FD+M+ RDV+SWS +I SY  + +   G
Sbjct: 159 VIRSGFWRISSVQNSILCLYSEFDSL-SARKLFDEMSERDVISWSVVIRSYVQSQEPVLG 217

Query: 181 LKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK-IDGPLGNSFI 238
           L++F  MVRE   EPD VT+ S+ +AC  L  +   RS+HG  +RR    +D  + NS I
Sbjct: 218 LELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLI 277

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MYSK  D  SA R F +   R   SW ++++ +  +  + +ALE F  M +   E + +
Sbjct: 278 DMYSKGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEV 337

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL+++L  C         KS+H  IIR+G       L  +L++ Y  C  + +   V  +
Sbjct: 338 TLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALS-SLMDAYTSCSLVDDARTVFDS 396

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  ++++S + +IS   R G S EA+ +  QM+     P++ +V S LSAC     L+  
Sbjct: 397 MSYKDVVSCSTMISGLGRCGRSDEAISIFCQMRD---KPNAITVISLLSACSVSAVLRTS 453

Query: 419 LQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
              HG  I+  +   D  V +S++D Y+KCG  ++A   F++I +KS+V W  +I  +  
Sbjct: 454 KWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAI 513

Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
           NG   +A+  F +M  +    + VT+L A+ AC++ G ++KG  +   ++    +  +  
Sbjct: 514 NGLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQKPSLQH 573

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSE 562
            + + DM ++ G++ TA  +  ++ E
Sbjct: 574 YSCIVDMLSRAGEIDTAMELIKNLPE 599



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 246/465 (52%), Gaps = 10/465 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H +++ +G          ++  Y+E  SL S+R +FD   E D   W+V+I+ Y+ + 
Sbjct: 154 KIHGYVIRSGFWRISSVQNSILCLYSEFDSL-SARKLFDEMSERDVISWSVVIRSYVQSQ 212

Query: 75  FFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-I 132
                + L+ +M+RE  T  + +   SVL+AC+ L D+  G  VHG  I+ GFD  DV +
Sbjct: 213 EPVLGLELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFV 272

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           + S++  Y +    D A +VFD+ T R++VSW+SI+A +  N    E L+MF  M +E +
Sbjct: 273 RNSLIDMYSKGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEAL 332

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           E D VT++SL + C       P +SIHG ++RR  + +    +S +  Y+ C  +  A  
Sbjct: 333 EADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDART 392

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
            F  +  +   S + MIS   R G   +A+  F +M   +++PN IT+I++L +C+    
Sbjct: 393 VFDSMSYKDVVSCSTMISGLGRCGRSDEAISIFCQM---RDKPNAITVISLLSACSVSAV 449

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           LR  K  H   IR+G+      +  ++++ YA+CG +    +    I E++I+SW ++IS
Sbjct: 450 LRTSKWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIIS 509

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            YA  G+  +AL    +M+     P++ +  ++LSAC + G ++ GL I   +++ D K 
Sbjct: 510 AYAINGLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQKP 569

Query: 433 EFVQ-SSLIDMYSKCGFKNLAYLLFERIQQK---SVVMWNSMICG 473
                S ++DM S+ G  + A  L + + +        W +++ G
Sbjct: 570 SLQHYSCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSG 614


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 165/467 (35%), Positives = 264/467 (56%), Gaps = 7/467 (1%)

Query: 275 SGWFQKALESFVKMLEVKEEPNLI-TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +G  +  L+S V   E+   P L  +LIT   +CA    L + +++H  +          
Sbjct: 45  TGIIRDTLDS-VDARELAATPRLYHSLIT---ACARYRSLDDARAIHAHLAGSQFAGSV- 99

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +L  +LI  Y +CG +++  +V   +  R++ SW  LI+ YA+  M  EAL LL  M   
Sbjct: 100 FLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLA 452
              P+ F+ AS L A G   S  +G QIH   +K D  D+ +V S+L+DMY++CG  ++A
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F++++ K+ V WN++I GF + G+    + +F +M  N  E    T+ +   A + I
Sbjct: 220 IAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGI 279

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G LE+GKWVH  +I  G R   ++   + DMYAK G +  A++VFD + +++VV+W++M+
Sbjct: 280 GALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSML 339

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             +  +G   +A + F++M   G+  N++TF++IL ACSH G V+EGK YF+ M+ + +E
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE 399

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P++ HY  +VDLL R+G +  A   I  MP     ++WGALL  CR+HK   + +     
Sbjct: 400 PEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADH 459

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +     +D G   LL NIYA  G WD   +VR +M+ TG+KK P  S
Sbjct: 460 VFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACS 506



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 222/453 (49%), Gaps = 15/453 (3%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           RE A     +Y S++ AC+    L     +H  +    F     +  S++  Y + G + 
Sbjct: 58  RELAATPR-LYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVA 116

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DAR+VFD M +RD+ SW+S+IA Y  N    E L +   M+R   +P+  T  SL +A G
Sbjct: 117 DARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG 176

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
              S      IH   ++     D  +G++ + MY++CG +  A   F ++E +   SW A
Sbjct: 177 ASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNA 236

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I+ + R G  +  L  F +M     E    T  +V  + AG+G L +GK VH  +I+ G
Sbjct: 237 LIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG 296

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                 ++G  +++ YA+ G M +  KV   + ++++++WN +++ +A+ G+ +EA+   
Sbjct: 297 ERLSA-FVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHF 355

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKC 446
            +M+  G+  +  +  S L+AC + G ++ G Q    + + + + E     +++D+  + 
Sbjct: 356 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRA 415

Query: 447 GFKNLAYL-LFERIQQKSVVMWNSMI--CGFYQNGNSLEAINLFHQMYLNCLEMDEV--- 500
           G  N A + +F+   + +  +W +++  C  ++N      I  F   ++  L+ D+    
Sbjct: 416 GLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK----IGQFAADHVFELDPDDTGPP 471

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             L  I A +  GQ +    V   + + GV+K+
Sbjct: 472 VLLYNIYAST--GQWDAAARVRKMMKATGVKKE 502



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 203/448 (45%), Gaps = 38/448 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C   R L     +HAHL  +           LI  Y + G++  +R VFD     D
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  Y  N+  +E++ L   M+R +   + F + S+L+A  +    G GE++H 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K  +  D  + +++L  Y   G +D A  VFD++ S++ VSW+++IA +    D   
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L MF  M R G E    T  S+  A   + +L   + +H H+++   ++   +GN+ + 
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K G ++ A + F +++K+   +W +M++ + + G  ++A+  F +M +     N IT
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++L +C+  G ++EGK     +    + PE D+                         
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDH------------------------- 404

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                  +  ++    R G+  +AL  + +M    + P +    + L +C    + ++G 
Sbjct: 405 -------YVTVVDLLGRAGLLNDALVFIFKMP---MKPTAAVWGALLGSCRMHKNAKIGQ 454

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
               HV ++D  D      L ++Y+  G
Sbjct: 455 FAADHVFELDPDDTGPPVLLYNIYASTG 482


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 176/535 (32%), Positives = 289/535 (54%), Gaps = 12/535 (2%)

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HG +L+     D  LGN+ I MY+KCG+L  A   F  + +R   SWTA++  + R G 
Sbjct: 26  LHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGD 85

Query: 278 FQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            ++ L     M  + +  PN  TL   L +C  +G +  G  +H   +R G    +  + 
Sbjct: 86  ARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGF-EGHHVVA 144

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW--- 393
            +L+  Y++ G++ +  +V      RN+++WN +IS YA  G  +++L +  +MQ     
Sbjct: 145 NSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQE 204

Query: 394 --GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI---KIDCKDEFVQSSLIDMYSKCG- 447
                PD F+ AS L ACG++G+ + G Q+H  ++        +  +  +L+DMY KC  
Sbjct: 205 EEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRC 264

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
              +A  +F R++QK+ + W ++I G  Q G   EA+ LF + + + +  D     + + 
Sbjct: 265 LLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVG 324

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
             ++   +E+G+ VH   +      D+ +  +L DMY KCG    A R F  +  RNVVS
Sbjct: 325 VFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVS 384

Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
           W+AMI+  G HG   +A  +F++M   G++P+EV ++ +L ACSHSG VEE + YF+A+R
Sbjct: 385 WTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIR 444

Query: 628 -IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
               + P  +HYACMVDLL R+G++  A  ++ +MP      +W  LL+ CR+HK + V 
Sbjct: 445 HDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVG 504

Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +   + L     ++   Y +LSNI+AE G+W E  +VR  M   GL+K  G S +
Sbjct: 505 REAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWV 559



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 272/554 (49%), Gaps = 26/554 (4%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           +   +LRA ++   +  G ++HG ++K GF  D ++  +++  Y + G L  A +VF  M
Sbjct: 6   MIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM 65

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPA 215
             R+VVSW++++  +  + D  E L++  +M     V P+  T+ +  +ACG +  +   
Sbjct: 66  PERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             IHG  +R   +    + NS +++YSK G +  A R F     R   +W AMIS Y  +
Sbjct: 126 VWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185

Query: 276 GWFQKALESFVKMLEVKEE-----PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
           G  + +L  F +M + ++E     P+  T  ++L +C  LG  REG  VH  ++ +G+  
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVST 245

Query: 331 EYD-YLGPALIEFYAECG-KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             +  L  AL++ Y +C   +    +V + + ++N + W  +I  +A++G  KEA+EL  
Sbjct: 246 ASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFG 305

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCG 447
           +  + G+  D   ++S +    +   ++ G Q+H + +K     D  V +SLIDMY KCG
Sbjct: 306 RFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCG 365

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
             + A   F  +  ++VV W +MI G  ++G+  EAI++F +M    +E DEV +L  + 
Sbjct: 366 LTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLS 425

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYID------TALTDMYAKCGDLQTAQRVFDSMS 561
           ACS+ G +E+ +    +  S  +R D  +         + D+  + G+L  A+ +  +M 
Sbjct: 426 ACSHSGLVEECR----RYFS-AIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMP 480

Query: 562 ERNVVS-WSAMIDCYGMHGQLNDAASLFKQML--DSGIKPNEVTFMNILWACSHSGSVEE 618
               V  W  ++    +H  +       + +L  D     N V   NI    + +G   E
Sbjct: 481 MAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIF---AEAGDWRE 537

Query: 619 GKFYFNAMRIFGVE 632
            +    AMR  G+ 
Sbjct: 538 CQRVRGAMRRRGLR 551



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 201/412 (48%), Gaps = 10/412 (2%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            +LH  LL  G   D      LI+ YA+ G LR +  VF    E +   W  L+  ++ +
Sbjct: 24  AQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRH 83

Query: 74  NFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
               E + L   M        N F   + L+AC  +GD+ +G  +HG  ++ GF+   V+
Sbjct: 84  GDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVV 143

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR--- 189
             S++  Y + G + DAR+VFD    R++V+W+++I+ Y       + L +F  M +   
Sbjct: 144 ANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQ 203

Query: 190 --EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI--DGPLGNSFIVMYSKCG 245
             E  +PD  T  SL +ACG L + R    +H  ++ R +    +  L  + + MY KC 
Sbjct: 204 EEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCR 263

Query: 246 DLLS-AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
            LL  A + F ++E++    WT +I  + + G  ++A+E F +        +   L +V+
Sbjct: 264 CLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVV 323

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
           G  A    + +G+ VHC  ++   G +   +  +LI+ Y +CG   E  +    +  RN+
Sbjct: 324 GVFADFALVEQGRQVHCYTVKTPAGLDVS-VANSLIDMYHKCGLTDEAARRFREVPARNV 382

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           +SW  +I+   + G  +EA+ +  +M+  G+ PD  +  + LSAC + G ++
Sbjct: 383 VSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVE 434



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 160/350 (45%), Gaps = 10/350 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   +  G       +  L+  Y++ G +  +R VFD     +   W  +I  Y     
Sbjct: 128 IHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGH 187

Query: 76  FEESILLYHKMIR-----EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD--K 128
             +S+L++ +M +     E      F + S+L+AC SLG    G +VH  ++  G     
Sbjct: 188 GRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTAS 247

Query: 129 DDVIQTSILCTYGEFGCL-DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           + ++  ++L  Y +  CL   A +VF+++  ++ + W+++I  +     V E +++F   
Sbjct: 248 NAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRF 307

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
              GV  D   + S+     +   +   R +H + ++    +D  + NS I MY KCG  
Sbjct: 308 WSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLT 367

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A R F ++  R   SWTAMI+   + G  Q+A+  F +M     EP+ +  + +L +C
Sbjct: 368 DEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSAC 427

Query: 308 AGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +  G + E +     I   + + P  ++    +++     G++SE + ++
Sbjct: 428 SHSGLVEECRRYFSAIRHDRRLRPRAEHY-ACMVDLLGRAGELSEAKDLV 476



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 2/172 (1%)

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           ++A +    +  G  +H  L+  G   D  +   L DMYAKCG+L+ A  VF  M ERNV
Sbjct: 11  LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNV 70

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLD-SGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           VSW+A++  +  HG   +   L   M   S + PNE T    L AC   G +  G +   
Sbjct: 71  VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHG 130

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           A    G E        +V L S+ G I  A ++     F  N   W A+++G
Sbjct: 131 ACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFR-NLVTWNAMISG 181


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 165/467 (35%), Positives = 264/467 (56%), Gaps = 7/467 (1%)

Query: 275 SGWFQKALESFVKMLEVKEEPNLI-TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           +G  +  L+S V   E+   P L  +LIT   +CA    L + +++H  +          
Sbjct: 45  TGIIRDTLDS-VDARELAATPRLYHSLIT---ACARYRSLDDARAIHAHLAGSQFAGSV- 99

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           +L  +LI  Y +CG +++  +V   +  R++ SW  LI+ YA+  M  EAL LL  M   
Sbjct: 100 FLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLA 452
              P+ F+ AS L A G   S  +G QIH   +K D  D+ +V S+L+DMY++CG  ++A
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F++++ K+ V WN++I GF + G+    + +F +M  N  E    T+ +   A + I
Sbjct: 220 IAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGI 279

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G LE+GKWVH  +I  G R   ++   + DMYAK G +  A++VFD + +++VV+W++M+
Sbjct: 280 GALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSML 339

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             +  +G   +A + F++M   G+  N++TF++IL ACSH G V+EGK YF+ M+ + +E
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE 399

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
           P++ HY  +VDLL R+G +  A   I  MP     ++WGALL  CR+HK   + +     
Sbjct: 400 PEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADH 459

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           +     +D G   LL NIYA  G WD   +VR +M+ TG+KK P  S
Sbjct: 460 VFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACS 506



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 222/453 (49%), Gaps = 15/453 (3%)

Query: 88  REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
           RE A     +Y S++ AC+    L     +H  +    F     +  S++  Y + G + 
Sbjct: 58  RELAATPR-LYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVA 116

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DAR+VFD M +RD+ SW+S+IA Y  N    E L +   M+R   +P+  T  SL +A G
Sbjct: 117 DARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG 176

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
              S      IH   ++     D  +G++ + MY++CG +  A   F ++E +   SW A
Sbjct: 177 ASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNA 236

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I+ + R G  +  L  F +M     E    T  +V  + AG+G L +GK VH  +I+ G
Sbjct: 237 LIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG 296

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
                 ++G  +++ YA+ G M +  KV   + ++++++WN +++ +A+ G+ +EA+   
Sbjct: 297 ERLSA-FVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHF 355

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKC 446
            +M+  G+  +  +  S L+AC + G ++ G Q    + + + + E     +++D+  + 
Sbjct: 356 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRA 415

Query: 447 GFKNLAYL-LFERIQQKSVVMWNSMI--CGFYQNGNSLEAINLFHQMYLNCLEMDEV--- 500
           G  N A + +F+   + +  +W +++  C  ++N      I  F   ++  L+ D+    
Sbjct: 416 GLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK----IGQFAADHVFELDPDDTGPP 471

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             L  I A +  GQ +    V   + + GV+K+
Sbjct: 472 VLLYNIYAST--GQWDAAARVRKMMKATGVKKE 502



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 203/448 (45%), Gaps = 38/448 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  +C   R L     +HAHL  +           LI  Y + G++  +R VFD     D
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  LI  Y  N+  +E++ L   M+R +   + F + S+L+A  +    G GE++H 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             +K  +  D  + +++L  Y   G +D A  VFD++ S++ VSW+++IA +    D   
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L MF  M R G E    T  S+  A   + +L   + +H H+++   ++   +GN+ + 
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           MY+K G ++ A + F +++K+   +W +M++ + + G  ++A+  F +M +     N IT
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            +++L +C+  G ++EGK     +    + PE D+                         
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDH------------------------- 404

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
                  +  ++    R G+  +AL  + +M    + P +    + L +C    + ++G 
Sbjct: 405 -------YVTVVDLLGRAGLLNDALVFIFKMP---MKPTAAVWGALLGSCRMHKNAKIGQ 454

Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
               HV ++D  D      L ++Y+  G
Sbjct: 455 FAADHVFELDPDDTGPPVLLYNIYASTG 482


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 181/496 (36%), Positives = 280/496 (56%), Gaps = 12/496 (2%)

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           ++K    SW ++I+   RSG   +AL +F  M ++   P   +    + +C+ L  +  G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K  H Q    G   +  ++  ALI  Y+ CGK+ +  KV   I +RNI+SW  +I  Y  
Sbjct: 96  KQTHQQAFVFGYQSDI-FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154

Query: 377 KGMSKEALELLVQM------QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
            G + +A+ L   +          +  DS  + S +SAC  V +  L   IH  VIK   
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 431 -KDEFVQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
            +   V ++L+D Y+K G   +A    +F++I  K  V +NS++  + Q+G S EA  +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274

Query: 488 HQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
            ++  N  +  + +T  T + A S+ G L  GK +H ++I  G+  D+ + T++ DMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG ++TA++ FD M  +NV SW+AMI  YGMHG    A  LF  M+DSG++PN +TF+++
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 607 LWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSH+G   EG  +FNAM+  FGVEP L+HY CMVDLL R+G ++ A+ +I  M    
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           +  IW +LL  CRIHK +++ +     L    +++ GYY LLS+IYA+ G W +  +VR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514

Query: 726 IMEVTGLKKVPGYSTI 741
           IM+  GL K PG+S +
Sbjct: 515 IMKNRGLVKPPGFSLL 530



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 225/441 (51%), Gaps = 27/441 (6%)

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D F W  +I     +    E++L +  M +     +   +P  ++ACSSL D+ SG++
Sbjct: 38  KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
            H +    G+  D  + ++++  Y   G L+DARKVFD++  R++VSW+S+I  Y  N +
Sbjct: 98  THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157

Query: 177 VSEGLKMFHSMVREGVEPDFVTML------SLAEACGELCSLRPARSIHGHVLRRKIKID 230
             + + +F  ++ +  + D    L      S+  AC  + +     SIH  V++R     
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217

Query: 231 GPLGNSFIVMYSKCGD--LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
             +GN+ +  Y+K G+  +  A + F +I  +   S+ +++S Y +SG   +A E F ++
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277

Query: 289 LEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAEC 346
           ++ K    N ITL TVL + +  G LR GK +H Q+IR  MG E D + G ++I+ Y +C
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR--MGLEDDVIVGTSIIDMYCKC 335

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G++    K    +  +N+ SW  +I+ Y   G + +ALEL   M   G+ P+  +  S L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSL------IDMYSKCGFKNLAYLLFERI 459
           +AC +      GL + G       K  F V+  L      +D+  + GF   AY L +R+
Sbjct: 396 AACSHA-----GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 460 QQK-SVVMWNSMI--CGFYQN 477
           + K   ++W+S++  C  ++N
Sbjct: 451 KMKPDSIIWSSLLAACRIHKN 471



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 200/418 (47%), Gaps = 48/418 (11%)

Query: 5   RSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           ++C++L  +    + H    V G   D   S+ LI  Y+  G L  +R VFD   + +  
Sbjct: 84  KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY------PSVLRACSSLGDLGSGE 115
            W  +I+ Y  N    +++ L+  ++ ++    + ++       SV+ ACS +   G  E
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
            +H  +IK GFD+   +  ++L  Y  G  G +  ARK+FD++  +D VS++SI++ Y  
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263

Query: 174 NADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
           +   +E  ++F  +V+  V   + +T+ ++  A     +LR  + IH  V+R  ++ D  
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           +G S I MY KCG + +A + F +++ +   SWTAMI+ Y   G   KALE F  M++  
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383

Query: 293 EEPNLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             PN IT ++VL +C+  G   EG +  +    R G+ P  ++ G               
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG--------------- 428

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
                             ++    R G  ++A +L+ +M+   + PDS   +S L+AC
Sbjct: 429 -----------------CMVDLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAAC 466



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 6/169 (3%)

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
           +NL  L    + +  V  WNS+I    ++G+S EA+  F  M    L     +F  AI+A
Sbjct: 26  QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           CS++  +  GK  H +   +G + DI++ +AL  MY+ CG L+ A++VFD + +RN+VSW
Sbjct: 86  CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145

Query: 569 SAMIDCYGMHGQLNDAASLFKQML------DSGIKPNEVTFMNILWACS 611
           ++MI  Y ++G   DA SLFK +L      D  +  + +  ++++ ACS
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194


>gi|302755014|ref|XP_002960931.1| hypothetical protein SELMODRAFT_74762 [Selaginella moellendorffii]
 gi|300171870|gb|EFJ38470.1| hypothetical protein SELMODRAFT_74762 [Selaginella moellendorffii]
          Length = 643

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 193/645 (29%), Positives = 330/645 (51%), Gaps = 25/645 (3%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC-GFDKDDVIQTSILCTYGEFG 144
           M R ++  +   Y +VLR C+    L  G+++H  I K  G  +D  +   +   YG+ G
Sbjct: 1   MERAKSQAAPSTYAAVLRRCADDRALEQGQRIHDHIRKFHGLSQDRFLANCLADMYGKCG 60

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS-EGLKMFHSMVREGVEPDFVTMLSLA 203
             D++RK+FD +  ++V SW+ +IA++ ++AD   E L +   M + GV P+  T +S+ 
Sbjct: 61  RPDESRKIFDAIADKNVFSWTILIAAFSESADRRWEALHLLRFMDQSGVAPNAATFVSVL 120

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC EL  L    ++H  +    + ++  +G + +  Y KCG +  A   F K+ ++ + 
Sbjct: 121 VACSELRCLDAVIALHARIASLGLDLEIVVGTALVNAYGKCGSVDRARNAFAKMPRKNSI 180

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG--LGWLREGKSVHC 321
            WTA+I+   ++G F  A+E + +M+    +P+ +T ++ L +CA          ++V  
Sbjct: 181 CWTAVITANAQNGRFGPAMELYERMVLEGLKPDRVTFVSALDACASSPRSPPPRYRAVAA 240

Query: 322 QIIR----------KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
           Q I            G  P    +  AL+  Y + G++    ++ H++ ERN + WN++I
Sbjct: 241 QRIASLAAAVAASGHGSSP---IVAAALLNMYGKLGELDRAREIFHSLPERNAVMWNVMI 297

Query: 372 SEYARKGMSKEALELLVQMQTWGLM-PDSFSVASSLSACGNVG-SLQLGLQIHGHVIKID 429
           +  ++ G   EAL     M   G   PD  +  S +SAC   G    L ++IHG ++   
Sbjct: 298 AVSSQAGAIHEALGFFWAMNLDGAARPDGSTFTSIISACAAGGVPPDLAVRIHGALLSSG 357

Query: 430 CK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
              D+ + ++L+ +Y+KC   + A  +F  I +K VV W ++I     +G S +A+    
Sbjct: 358 VTLDDQLLTALLGLYAKCSRTDDARRVFSEIWEKGVVPWTALISALAADGRSSDAVAALR 417

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           +M L  +  +E TF+ AI+A S +G +  G+ +H +  S G+  D ++   +  MYA CG
Sbjct: 418 RMELEGVRPNEYTFVAAIEAASQLG-IAHGRSLHARATSAGLDSDPFVANTVMAMYASCG 476

Query: 549 DLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            +  A+ VFD M   RN+VSW+ MI+    HG   ++  L+ +M   G+ P+  TF+++L
Sbjct: 477 SIAEARAVFDGMGHRRNLVSWNCMIEALARHGHSLESLELYSEMELDGVPPSAATFVSVL 536

Query: 608 WACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
            ACSH G VE G  YF A R  +G++ + +H  C+VDLL R+G ++ A   I S+P    
Sbjct: 537 AACSHVGEVELGYHYFVAFRRDYGIQAEAEHIGCVVDLLGRAGWLDSAESFIQSLPAADL 596

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEK-ELSVTGTNDNGYYTLLSNI 710
            S W  LL  C+ H        +    L V G  D   Y  +SN+
Sbjct: 597 SSSWAVLLGACKTHGDATRGARVAGWALGVDG-QDAASYVTVSNL 640



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 168/633 (26%), Positives = 304/633 (48%), Gaps = 35/633 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLL-VTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           + R C + R L    R+H H+    GL  D   +  L + Y + G    SR +FD   + 
Sbjct: 16  VLRRCADDRALEQGQRIHDHIRKFHGLSQDRFLANCLADMYGKCGRPDESRKIFDAIADK 75

Query: 59  DSFMWAVLIKCYMWNNFFE-ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           + F W +LI  +  +     E++ L   M +     +   + SVL ACS L  L +   +
Sbjct: 76  NVFSWTILIAAFSESADRRWEALHLLRFMDQSGVAPNAATFVSVLVACSELRCLDAVIAL 135

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H RI   G D + V+ T+++  YG+ G +D AR  F KM  ++ + W+++I +   N   
Sbjct: 136 HARIASLGLDLEIVVGTALVNAYGKCGSVDRARNAFAKMPRKNSICWTAVITANAQNGRF 195

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL---- 233
              ++++  MV EG++PD VT +S  +AC       P R  +  V  ++I          
Sbjct: 196 GPAMELYERMVLEGLKPDRVTFVSALDACASSPRSPPPR--YRAVAAQRIASLAAAVAAS 253

Query: 234 --GNSFIV------MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             G+S IV      MY K G+L  A   F  + +R    W  MI+  +++G   +AL  F
Sbjct: 254 GHGSSPIVAAALLNMYGKLGELDRAREIFHSLPERNAVMWNVMIAVSSQAGAIHEALGFF 313

Query: 286 VKM-LEVKEEPNLITLITVLGSCAGLGWLRE-GKSVHCQIIRKGMGPEYDYLGPALIEFY 343
             M L+    P+  T  +++ +CA  G   +    +H  ++  G+  + D L  AL+  Y
Sbjct: 314 WAMNLDGAARPDGSTFTSIISACAAGGVPPDLAVRIHGALLSSGVTLD-DQLLTALLGLY 372

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
           A+C +  +  +V   I E+ ++ W  LIS  A  G S +A+  L +M+  G+ P+ ++  
Sbjct: 373 AKCSRTDDARRVFSEIWEKGVVPWTALISALAADGRSSDAVAALRRMELEGVRPNEYTFV 432

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQ 461
           +++ A   +G +  G  +H          D FV ++++ MY+ CG    A  +F+ +  +
Sbjct: 433 AAIEAASQLG-IAHGRSLHARATSAGLDSDPFVANTVMAMYASCGSIAEARAVFDGMGHR 491

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           +++V WN MI    ++G+SLE++ L+ +M L+ +     TF++ + ACS++G++E G   
Sbjct: 492 RNLVSWNCMIEALARHGHSLESLELYSEMELDGVPPSAATFVSVLAACSHVGEVELG--- 548

Query: 522 HHKLIS----YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV-VSWSAMIDCYG 576
           +H  ++    YG++ +      + D+  + G L +A+    S+   ++  SW+ ++    
Sbjct: 549 YHYFVAFRRDYGIQAEAEHIGCVVDLLGRAGWLDSAESFIQSLPAADLSSSWAVLLGACK 608

Query: 577 MHGQLNDAASLFKQML--DSGIKPNEVTFMNIL 607
            HG     A +    L  D     + VT  N+L
Sbjct: 609 THGDATRGARVAGWALGVDGQDAASYVTVSNLL 641


>gi|297810965|ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319203|gb|EFH49625.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 210/787 (26%), Positives = 393/787 (49%), Gaps = 68/787 (8%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + ++C ++ +LT    LH  +   G       S  ++  YA+   +   + +F     
Sbjct: 25  LDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQMDS 84

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEK 116
            D  +W +++   +  +   E++  +  M   ++   S+  +  +L  C  LGD  +G+ 
Sbjct: 85  VDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKS 143

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +H  IIK G +KD ++  +++  Y +FG  + DA   FD +  +DVVSW++IIA + +N 
Sbjct: 144 MHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENK 203

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEAC---GELCSLRPARSIHGHVLRRK-IKIDG 231
            +++  + F  M++E  EP++ T+ ++   C   G+  + R  R IH +V++R  ++   
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHV 263

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF---VKM 288
            + NS +  Y + G +  A   F ++  +   SW  +I+ Y  +  + KAL+ F   V+ 
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQK 323

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
            +V  +P  +T++++L  CA L  L  GK +H  I+R     E   +G ALI FYA  G 
Sbjct: 324 GDVSLDP--VTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
            S        +  ++I+SWN ++  +A      + L LL  +    +  DS ++ S L  
Sbjct: 382 TSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKF 441

Query: 409 CGNVGSLQLGLQIHGHVIKI----DCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKS 463
           C NV  +    ++HG+ +K     + ++  + ++L+D Y+KCG    A+ +F+ + ++++
Sbjct: 442 CTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRT 501

Query: 464 VVMWNSMICGFYQNGN-------------------SL------------EAINLFHQMYL 492
           +V +NS++ G+  +G+                   SL            EAI +F ++  
Sbjct: 502 LVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQA 561

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +  + VT +  +  C+ +  L   +  H  +I  G   DI +   L D+YAKCG L+ 
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR-GRLGDIRLKGTLLDVYAKCGSLKH 620

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A  VF S + R++V ++AM+  Y +HG+  +A  +F  M+DS IKP+            H
Sbjct: 621 AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPD------------H 668

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
            G     + Y +   + G++P ++ YAC VDLL+R G ++ A+  I  MP   N +IWG 
Sbjct: 669 DGL----QIYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNANIWGT 724

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           LL  C  + R+D+  ++   L    +++ G + L+SN+YA +  W+   ++R++M+   +
Sbjct: 725 LLRACTTYNRMDLGHSVANHLLQAESDETGNHVLISNMYAADAKWEGVMELRNLMKKKEM 784

Query: 733 KKVPGYS 739
           KK  G S
Sbjct: 785 KKPAGCS 791



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 158/629 (25%), Positives = 309/629 (49%), Gaps = 46/629 (7%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           ++  V++AC+S+ +L SG  +HG + K G      +  S+L  Y +   +DD +K+F +M
Sbjct: 23  VFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQM 82

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPA 215
            S D V W +I+ +    +   E ++ F +M   +  +P  VT   L   C  L      
Sbjct: 83  DSVDPVVW-NIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNG 141

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNR 274
           +S+H ++++  ++ D  +GN+ + MY+K G ++  A   F  I  +   SW A+I+ ++ 
Sbjct: 142 KSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSE 201

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG---WLREGKSVHCQIIRKGMGPE 331
           +     A  SF  ML+   EPN  T+  VL  CA +G     R G+ +H  ++++     
Sbjct: 202 NKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQT 261

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM- 390
           + ++  +L+ FY   G++ E   +   +G ++++SWN++I+ YA      +AL+L   + 
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLV 321

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGF 448
           Q   +  D  ++ S L  C  +  L  G +IH ++++     +D  V ++LI  Y++ G 
Sbjct: 322 QKGDVSLDPVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
            + AY  F  +  K ++ WN+++  F  +    + +NL H ++   + +D VT L+ ++ 
Sbjct: 382 TSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKF 441

Query: 509 CSNIGQLEKGKWVHHKLISYGV---RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-- 563
           C+N+  + K K VH   +  G+    ++  +  AL D YAKCG+++ A ++F  +SER  
Sbjct: 442 CTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRT 501

Query: 564 ------------------------------NVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
                                         ++ +WS M+  Y      N+A  +F+++  
Sbjct: 502 LVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQA 561

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            G++PN VT MN+L  C+   S+   +   +   I G   D++    ++D+ ++ G ++ 
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVR-QCHGYIIRGRLGDIRLKGTLLDVYAKCGSLKH 620

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKR 682
           A+ +  S     +  ++ A++ G  +H R
Sbjct: 621 AYSVFQS-DARRDLVMFTAMVAGYAVHGR 648



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 263/568 (46%), Gaps = 29/568 (5%)

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G   D    L + +AC  +  L   R++HG V +        +  S + MY+KC  +   
Sbjct: 16  GFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDC 75

Query: 251 ERTFVKIEKRCTTSWTAM-----ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           ++ F +++      W  +     +SC   +  F KA+         + +P+ +T   +L 
Sbjct: 76  QKMFRQMDSVDPVVWNIVLTGLSVSCGRETMRFFKAMH-----FADEPKPSSVTFAILLP 130

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGK-MSECEKVIHAIGERN 363
            C  LG    GKS+H  II+ G+  E D L G AL+  YA+ G  + +       I +++
Sbjct: 131 VCVRLGDSYNGKSMHSYIIKTGL--EKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKD 188

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQLGLQ 420
           ++SWN +I+ ++   M  +A      M      P+  ++A+ L  C ++G   + + G Q
Sbjct: 189 VVSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQ 248

Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
           IH +V++        FV +SL+  Y + G    A  LF R+  K +V WN +I G+  N 
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNH 308

Query: 479 NSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYI 536
             L+A+ LFH +     + +D VT L+ +  C+ +  L  GK +H  ++ +  + +D  +
Sbjct: 309 EWLKALQLFHNLVQKGDVSLDPVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSV 368

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             AL   YA+ GD   A   F  MS ++++SW+A++D +    +     +L   + +  I
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAI 428

Query: 597 KPNEVTFMNILWACSHS---GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
             + VT +++L  C++    G V+E   Y     +   E + +    ++D  ++ G++E 
Sbjct: 429 TLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEY 488

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A K+   +        + +LL+G       D  + +  E+S   T D   ++L+  IYAE
Sbjct: 489 AHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMS---TTDLTTWSLMVRIYAE 545

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               +E   V   ++  G++  P   TI
Sbjct: 546 SCFPNEAIGVFREIQARGMR--PNTVTI 571


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 202/670 (30%), Positives = 336/670 (50%), Gaps = 72/670 (10%)

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           K+ V   S++  + + G + DAR++FD M  R++VSW+S+IA+Y  N  V E  ++F  M
Sbjct: 44  KNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKM 103

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
               +   +  M++     GEL   R   ++  +      K +    N+ +  Y+K    
Sbjct: 104 PTRDLY-SWTLMITCYTRNGELAKARNLFNLLPY------KWNPVCCNAMVAGYAKNRQF 156

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK--------------- 292
             A R F  +  +   SW +M++ Y R+G  +  L+ F +M E                 
Sbjct: 157 DEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVG 216

Query: 293 ------------EEPNLITLITVLGSCAGLGWLREGKSVHCQI-IRKGMGPEYDYLGPAL 339
                         PN ++ +T+L   A  G + E + +  Q+ IR  +         A+
Sbjct: 217 DLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWN------AM 270

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-------QT 392
           I  Y +   + E   +   + E+N +SW  +I+ Y R G   EA +LL QM       QT
Sbjct: 271 IAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQT 330

Query: 393 WGL--------MPDSFSVASSLS----ACGNV--------GSLQLGLQIHGHVIKIDCKD 432
             +        M D+  + + +S     C N         G +   L +   ++K   KD
Sbjct: 331 AMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVK---KD 387

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
               ++++  Y++ G  + A  +FE +++K++V WNS+I G  QNG+ L+A+  F  M  
Sbjct: 388 IVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGH 447

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
              + D+ TF   + +C+++  L+ GK +H  ++  G   D+++  AL  MYAKCG + +
Sbjct: 448 EGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISS 507

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A+ +F  +   +VVSW+++I  Y ++G   +A  LF +M   G+ P+EVTF+ IL ACSH
Sbjct: 508 AELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSH 567

Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
            G +++G   F  M + + +EP  +HYACMVDLL R+G +E AF+++  M   AN  IWG
Sbjct: 568 VGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWG 627

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL  CRIH  +++ K   ++L     +    Y LLSN+ AE G WDE  +VR +M+  G
Sbjct: 628 ALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKG 687

Query: 732 LKKVPGYSTI 741
            +K PG+S I
Sbjct: 688 AEKQPGWSWI 697



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 155/631 (24%), Positives = 289/631 (45%), Gaps = 85/631 (13%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H +      +I ++A+ G +  +R +FD   + +   W  +I  Y+ N+  EE+  L+ K
Sbjct: 43  HKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDK 102

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M     T   + +  ++   +  G+L     +   +    +  + V   +++  Y +   
Sbjct: 103 M----PTRDLYSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQ 155

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
            D+AR++FD M ++D+VSW+S++  Y  N ++  GL+ F  M     E D V+   + + 
Sbjct: 156 FDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEM----AERDVVSWNLMVDG 211

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM---YSKCGDLLSAERTFVKIEKRCT 262
             E+  L  +            KI  P   S++ M   +++ G +  A R F ++  R  
Sbjct: 212 FVEVGDLNSSWEFFE-------KIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNV 264

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
            +W AMI+ Y ++    +A+  F++M     E N I+  TV+     +G L E + +  Q
Sbjct: 265 VAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSISWTTVINGYVRMGKLDEARQLLNQ 320

Query: 323 IIRKGMGPEYDYLG--------------------------PALIEFYAECGKMSECEKVI 356
           +  + +  +   +                             +I  Y++CG+M E   + 
Sbjct: 321 MPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLF 380

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-----TW------------------ 393
             + +++I+SWN +++ YA+ G    A+++  +M+     +W                  
Sbjct: 381 KQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALK 440

Query: 394 --------GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYS 444
                   G  PD  + A  LS+C ++ +LQ+G Q+H  V+K     D FV ++LI MY+
Sbjct: 441 SFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYA 500

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KCG  + A LLF+ I    VV WNS+I  +  NGN  EA+ LFH+M +  +  DEVTF+ 
Sbjct: 501 KCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVG 560

Query: 505 AIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-E 562
            + ACS++G +++G K     + +Y +         + D+  + G L+ A ++   M   
Sbjct: 561 ILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKIN 620

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            N   W A++    +HG L  A    +++L+
Sbjct: 621 ANAGIWGALLGACRIHGNLELAKFAAEKLLE 651



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 138/595 (23%), Positives = 254/595 (42%), Gaps = 104/595 (17%)

Query: 27  YDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKM 86
           ++P     ++  YA+      +R +FD     D   W  ++  Y  N      +  + +M
Sbjct: 138 WNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEM 197

Query: 87  IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL 146
                   N +    +     +GDL S  +   +I     + + V   ++LC +  FG +
Sbjct: 198 AERDVVSWNLMVDGFV----EVGDLNSSWEFFEKIP----NPNTVSWVTMLCGFARFGKI 249

Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG------VEPDFVTML 200
            +AR++FD+M  R+VV+W+++IA+Y  N  V E + +F  M  +       V   +V M 
Sbjct: 250 AEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMG 309

Query: 201 SLAEACGELCSLRPARSIHG---------------------------------------- 220
            L EA  +L +  P R++                                          
Sbjct: 310 KLDEA-RQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYS 368

Query: 221 ---------HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
                    H+ ++ +K D    N+ +  Y++ G + +A + F +++++   SW ++IS 
Sbjct: 369 QCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISG 428

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
             ++G +  AL+SF+ M    ++P+  T    L SCA L  L+ GK +H  +++ G   +
Sbjct: 429 LTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATD 488

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
             ++  ALI  YA+CG +S  E +   I   +++SWN LI+ YA  G  +EAL+L  +M+
Sbjct: 489 L-FVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKME 547

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFK 449
             G+ PD  +    LSAC +VG +  GL++   +++    +   +  + ++D+  + G  
Sbjct: 548 VEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAG-- 605

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
                   R++                     EA  L   M +N    +   +   + AC
Sbjct: 606 --------RLE---------------------EAFQLVRGMKINA---NAGIWGALLGAC 633

Query: 510 SNIGQLEKGKWVHHKLISYGVRK-DIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
              G LE  K+   KL+ +   K   Y+   L++M A+ G      RV   M E+
Sbjct: 634 RIHGNLELAKFAAEKLLEFEPHKTSNYV--LLSNMQAEAGRWDEVARVRRLMKEK 686



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 96/191 (50%)

Query: 19  HLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEE 78
           HL    +  D  +   ++ SYA++G + ++  +F+  KE +   W  LI     N  + +
Sbjct: 378 HLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLD 437

Query: 79  SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILC 138
           ++  +  M  E        +   L +C+ L  L  G+++H  ++K G+  D  +  +++ 
Sbjct: 438 ALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALIT 497

Query: 139 TYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVT 198
            Y + G +  A  +F  +   DVVSW+S+IA+Y  N +  E LK+FH M  EGV PD VT
Sbjct: 498 MYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVT 557

Query: 199 MLSLAEACGEL 209
            + +  AC  +
Sbjct: 558 FVGILSACSHV 568



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 18/244 (7%)

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           F  +  I    K G  + A  +F+ +  K+ V  NSMI  F +NG   +A  LF  M   
Sbjct: 16  FRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMP-- 73

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
             + + V++ + I A  +  ++E+ + +  K+ +    +D+Y  T +   Y + G+L  A
Sbjct: 74  --QRNIVSWNSMIAAYLHNDRVEEARQLFDKMPT----RDLYSWTLMITCYTRNGELAKA 127

Query: 554 QRVFDSMSER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           + +F+ +  + N V  +AM+  Y  + Q ++A  LF  M    +    V++ ++L   + 
Sbjct: 128 RNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDL----VSWNSMLTGYTR 183

Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           +G +  G  +F  M     E D+  +  MVD     GD+  +++    +P P N   W  
Sbjct: 184 NGEMRLGLQFFEEM----AERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNP-NTVSWVT 238

Query: 673 LLNG 676
           +L G
Sbjct: 239 MLCG 242



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 6   SCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC +L  L    +LH  ++ +G   D   S  LI  YA+ GS+ S+ L+F      D   
Sbjct: 463 SCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVS 522

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           W  LI  Y  N    E++ L+HKM  E        +  +L ACS +G +  G K+
Sbjct: 523 WNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKL 577



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 21/223 (9%)

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
           K+  +   K+     ++   +AK G +  A+++FD M +RN+VSW++MI  Y  + ++ +
Sbjct: 36  KVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEE 95

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC--- 640
           A  LF +M      P    +   L    ++ + E  K    A  +F + P   +  C   
Sbjct: 96  ARQLFDKM------PTRDLYSWTLMITCYTRNGELAK----ARNLFNLLPYKWNPVCCNA 145

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MV   +++   + A ++  +MP     S W ++L G   + R   M+   +        D
Sbjct: 146 MVAGYAKNRQFDEARRLFDAMPAKDLVS-WNSMLTG---YTRNGEMRLGLQFFEEMAERD 201

Query: 701 NGYYTLLSNIYAEEGN----WDEFGKVRSIMEVTGLKKVPGYS 739
              + L+ + + E G+    W+ F K+ +   V+ +  + G++
Sbjct: 202 VVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFA 244


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 304/554 (54%), Gaps = 9/554 (1%)

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAE 251
            PD  T  SL  A     S   A  +H   LR   ++       S +  Y + G +  A 
Sbjct: 67  RPDGFTFPSLIRAAPSNAS---AAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAY 123

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
           + F ++ +R   +W AM+S   R+    +A+  F +M+      + +T+ +VL  C  LG
Sbjct: 124 KVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLG 183

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
                  +H   ++ G+  E  ++  ALI+ Y + G + E + V H +  R++++WN +I
Sbjct: 184 DQVLALVMHVYAVKHGLDKEL-FVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSII 242

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI--D 429
           S   ++G +  AL++   M+  G+ PD  ++ S  SA    G  +    +H +V++   D
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD 302

Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF-H 488
             D    ++++DMY+K      A  +F+ +  +  V WN++I G+ QNG + EA+  + H
Sbjct: 303 VDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGH 362

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
                 L+  + TF++ + A S++G L++G  +H   I  G+  D+Y+ T L D+YAKCG
Sbjct: 363 MQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCG 422

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            L  A  +F+ M  R+   W+A+I   G+HG   +A +LF +M   GIKP+ VTF+++L 
Sbjct: 423 KLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLA 482

Query: 609 ACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
           ACSH+G V++G+ +F+ M++ + + P  +HYACM D+L R+G ++ AF  I +MP   + 
Sbjct: 483 ACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDS 542

Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
           ++WGALL  CRIH  +++ K   + L      + GYY L+SN+YA+ G WD   +VRS++
Sbjct: 543 AVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLV 602

Query: 728 EVTGLKKVPGYSTI 741
               L+K PG+S+I
Sbjct: 603 RRQNLQKTPGWSSI 616



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 163/562 (29%), Positives = 289/562 (51%), Gaps = 42/562 (7%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT-SILCTYGEFGCLDDARKVFD 154
           F +PS++RA  S     S  ++H   ++ G  +  V  + S++  Y  FG + +A KVFD
Sbjct: 71  FTFPSLIRAAPSNA---SAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFD 127

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M+ RDV +W+++++    NA  +E + +F  MV EGV  D VT+ S+   C  L     
Sbjct: 128 EMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVL 187

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
           A  +H + ++  +  +  + N+ I +Y K G L  A+  F  +E R   +W ++IS   +
Sbjct: 188 ALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQ 247

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
            G    AL+ F  M      P+++TL+++  + A  G  R  KS+HC ++R+G   +   
Sbjct: 248 RGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDII 307

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW- 393
            G A+++ YA+   +   +++  ++  ++ +SWN LI+ Y + G++ EA+E    MQ   
Sbjct: 308 AGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHE 367

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
           GL     +  S L A  ++G+LQ G+++H   IKI    D +V + LID+Y+KCG    A
Sbjct: 368 GLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEA 427

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
            LLFE++ ++S   WN++I G   +G+  EA+ LF +M    ++ D VTF++ + ACS+ 
Sbjct: 428 MLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHA 487

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G +++G+        + V +  Y    +   YA                         M 
Sbjct: 488 GLVDQGRSF------FDVMQVTYDIVPIAKHYA------------------------CMA 517

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
           D  G  GQL++A +  + M    IKP+   +  +L AC   G+VE GK    +  +F ++
Sbjct: 518 DMLGRAGQLDEAFNFIQNM---PIKPDSAVWGALLGACRIHGNVEMGK--VASQNLFELD 572

Query: 633 PD-LQHYACMVDLLSRSGDIEG 653
           P+ + +Y  M ++ ++ G  +G
Sbjct: 573 PENVGYYVLMSNMYAKVGKWDG 594



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 241/489 (49%), Gaps = 19/489 (3%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPP--ASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           L R+  +     +LHA  L  GL   P    S  L+ +Y   G +  +  VFD   E D 
Sbjct: 76  LIRAAPSNASAAQLHACALRLGL-VRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDV 134

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++     N    E++ L+ +M+ E          SVL  C  LGD      +H  
Sbjct: 135 PAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVY 194

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +K G DK+  +  +++  YG+ G L++A+ VF  M  RD+V+W+SII+        +  
Sbjct: 195 AVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAA 254

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL-GNSFIV 239
           LKMF  M   GV PD +T++SLA A  +    R A+S+H +V+RR   +D  + GN+ + 
Sbjct: 255 LKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVD 314

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI- 298
           MY+K  ++ +A+R F  +  + + SW  +I+ Y ++G   +A+E +  M +  E    I 
Sbjct: 315 MYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM-QKHEGLKAIQ 373

Query: 299 -TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T ++VL + + LG L++G  +H   I+ G+  +  Y+G  LI+ YA+CGK++E   +  
Sbjct: 374 GTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDV-YVGTCLIDLYAKCGKLAEAMLLFE 432

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
            +  R+   WN +IS     G   EAL L  +MQ  G+ PD  +  S L+AC + G +  
Sbjct: 433 KMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQ 492

Query: 418 G------LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSM 470
           G      +Q+   ++ I        + + DM  + G  + A+   + +  K    +W ++
Sbjct: 493 GRSFFDVMQVTYDIVPIAKH----YACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGAL 548

Query: 471 ICGFYQNGN 479
           +     +GN
Sbjct: 549 LGACRIHGN 557



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 4/183 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  R+HA  +  GL+ D    T LI+ YA+ G L  + L+F+      +
Sbjct: 380 LPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRST 439

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I     +    E++ L+ +M +E     +  + S+L ACS  G +  G      
Sbjct: 440 GPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD- 498

Query: 121 IIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADV 177
           +++  +D   + +    +    G  G LD+A      M  + D   W +++ +   + +V
Sbjct: 499 VMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNV 558

Query: 178 SEG 180
             G
Sbjct: 559 EMG 561


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 194/583 (33%), Positives = 308/583 (52%), Gaps = 48/583 (8%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI---VMYSKCGDLLSAERTFVK 256
           LSL   C  L SLR    IH  +++  +       +  +   V+      L  A   F  
Sbjct: 6   LSLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           I++     W  M   +  S     AL+ +V M+ +   PN  T   +L SCA     +EG
Sbjct: 63  IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV--------------------- 355
           + +H Q+++ G   +  Y+  +LI  Y + G++ + +KV                     
Sbjct: 123 QQLHGQVLKFGFDLDL-YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYAS 181

Query: 356 ----------IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASS 405
                        I  ++++SWN  IS YA  G  KEALEL  +M    + PD  ++ + 
Sbjct: 182 RGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTV 241

Query: 406 LSACGNVGSLQLGLQIHG----HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
           LSAC   GS++LG Q+H     H    + K   + ++LID+YSKCG    A  LF+ +  
Sbjct: 242 LSACAQSGSIELGRQVHSWINDHGFGXNLK---IVNALIDLYSKCGELETACGLFQGLSN 298

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K V+ WN++I G+       EA+ LF  M  +  + ++VT L+ + AC+++G ++ G+W+
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWI 358

Query: 522 HHKLISY--GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
           H  +     GV     + T+L DMYAKCGD++ AQ+VFDSM  R++ SW+AMI  + MHG
Sbjct: 359 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG 418

Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHY 638
           + N A  +F +M  +GI+P+++TF+ +L ACSHSG ++ G+  F +M R + + P L+HY
Sbjct: 419 RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHY 478

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
            CM+DL   SG  + A KMI++M    +G IW +LL  C++H  +++ ++  + L     
Sbjct: 479 GCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEP 538

Query: 699 NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            + G Y LLSNIYA    W+E  K R+++   G+KKVPG S+I
Sbjct: 539 ENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSI 581



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 257/521 (49%), Gaps = 46/521 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIES---YAEMGSLRSSRLVFDTFKE 57
           + L   C  L+ L  +HA ++ TGLH    A ++L+E          L  +  VFDT +E
Sbjct: 6   LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           P   +W  + + +  ++    ++ LY  M+      +++ +P +L++C+       G+++
Sbjct: 66  PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY------ 171
           HG+++K GFD D  I TS++  Y + G L+DA+KV DK + RDVVS++++I  Y      
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185

Query: 172 ------FD----------NADVS---------EGLKMFHSMVREGVEPDFVTMLSLAEAC 206
                 FD          NA +S         E L++F  M++  V PD  TM+++  AC
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
            +  S+   R +H  +       +  + N+ I +YSKCG+L +A   F  +  +   SW 
Sbjct: 246 AQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWN 305

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
            +I  Y     +++AL  F  ML   E+PN +T++++L +CA LG +  G+ +H  I ++
Sbjct: 306 TLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKR 365

Query: 327 GMG-PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
             G      L  +LI+ YA+CG +   ++V  ++  R++ SWN +I  +A  G +  A +
Sbjct: 366 LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSL------ 439
           +  +M+  G+ PD  +    LSAC + G L LG     H+ +   +D  +   L      
Sbjct: 426 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR----HIFRSMTRDYKLMPKLEHYGCM 481

Query: 440 IDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           ID+    G FK    ++     +   V+W S++     +GN
Sbjct: 482 IDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGN 522


>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 584

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 183/557 (32%), Positives = 291/557 (52%), Gaps = 14/557 (2%)

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
           ++ +LS A       SLR    IH   +   +  +       +   + C  L  A R F 
Sbjct: 20  YIGLLSAAGVPSSSSSLRALLPIHARAVLLGVAANPAFATRLLAAAAPC-SLAYARRVFD 78

Query: 256 KIEKRCTTSWTAMISCYNRS-----GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
              +R    W  ++  +  +          AL+ + +M      P+  T   VL +CA  
Sbjct: 79  AAPRRDAYMWNTLLRAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAA 138

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI---HAIGERNILSW 367
              R G++ H   +R  +  E  ++  ALI  Y + G +++ E+V     A+G R ++SW
Sbjct: 139 RAPRLGRAAHGDAVRFALA-EDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSW 197

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
             +++ YA+  +  +A+ +   M   G++P+  ++ S L        L  G  +HG V+K
Sbjct: 198 TAMVAGYAQNCLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVK 257

Query: 428 I--DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           +  D     V ++LI MY KCG    A  LF+ +   +VV WN+M+  + QNG+ + AI 
Sbjct: 258 LGFDANLPLV-NALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIK 316

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
            FH+M    +  D VT ++ + AC+  G LE GKWVH    S G+  D  I   L DMYA
Sbjct: 317 FFHRMLSEKVGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYA 376

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           KCG++  A++ FD + E  VVSWSAMI  Y  HG+  +A +LF  M D G+KPN  T   
Sbjct: 377 KCGEIAYARQAFDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTA 436

Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
           +L AC HSG V+EG   FN++ R + + P L++YACMVD+L R+G +  A+++I  M   
Sbjct: 437 VLVACGHSGLVDEGLAIFNSIVRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQ 496

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
            +  IWGA L GCR+H  +++ + + K+L  +G+ND  +Y L++N+Y E G  ++  + R
Sbjct: 497 PDKCIWGAFLGGCRLHGNLELAEFVAKDLFQSGSNDVTFYVLMANMYFEAGMLEDAERTR 556

Query: 725 SIMEVTGLKKVPGYSTI 741
             M+   LKK  G+S +
Sbjct: 557 RAMKEMELKKTAGHSLV 573



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 153/569 (26%), Positives = 269/569 (47%), Gaps = 59/569 (10%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR L  +HA  ++ G+  +P  +TRL+ + A   SL  +R VFD     D++MW  L++ 
Sbjct: 36  LRALLPIHARAVLLGVAANPAFATRLLAAAAPC-SLAYARRVFDAAPRRDAYMWNTLLRA 94

Query: 70  YMWNNFFEES-----ILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
           +        S     + LY +M         + YP VL AC++      G   HG  ++ 
Sbjct: 95  HAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRF 154

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVF---DKMTSRDVVSWSSIIASYFDNADVSEGL 181
              +D  + ++++  Y + G + DA +VF     + +R VVSW++++A Y  N    + +
Sbjct: 155 ALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAV 214

Query: 182 KMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            +F +MV +G+ P+ +T++S      G+ C L     +HG V++     + PL N+ I M
Sbjct: 215 TVFGAMVAQGMLPNEITLISFLPCLQGQEC-LAAGEMVHGFVVKLGFDANLPLVNALIAM 273

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG + +A+  F  +      SW  M++ Y ++G   +A++ F +ML  K   + +TL
Sbjct: 274 YGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTL 333

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++VL +C   G L  GK VH     +G+  +   +G  L++ YA+CG+++   +    + 
Sbjct: 334 VSVLSACTRQGALETGKWVHELARSRGLDTDAR-IGNVLVDMYAKCGEIAYARQAFDGLR 392

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E  ++SW+ +IS YA  G  +EAL L   M+  G+ P+SF++ + L ACG+ G +  GL 
Sbjct: 393 EPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLA 452

Query: 421 IHGHVIKIDCKDEFVQSSL------IDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
           I   ++    +D  +  +L      +DM  + G    AY +   +  Q    +W + + G
Sbjct: 453 IFNSIV----RDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGG 508

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
              +GN               LE+ E       Q+ SN                     D
Sbjct: 509 CRLHGN---------------LELAEFVAKDLFQSGSN---------------------D 532

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           +     + +MY + G L+ A+R   +M E
Sbjct: 533 VTFYVLMANMYFEAGMLEDAERTRRAMKE 561



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 239/500 (47%), Gaps = 19/500 (3%)

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +H R +  G   +    T +L        L  AR+VFD    RD   W++++ ++  +A 
Sbjct: 42  IHARAVLLGVAANPAFATRLLAAAAPCS-LAYARRVFDAAPRRDAYMWNTLLRAH-AHAQ 99

Query: 177 VSEG------LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
              G      L+++  M   GV PD  T   +  AC    + R  R+ HG  +R  +  D
Sbjct: 100 APAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFALAED 159

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFV---KIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
           G + ++ I MY + GD+  AE+ F+    +  R   SWTAM++ Y ++  F +A+  F  
Sbjct: 160 GFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVTVFGA 219

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M+     PN ITLI+ L    G   L  G+ VH  +++ G       +  ALI  Y +CG
Sbjct: 220 MVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVN-ALIAMYGKCG 278

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
            ++  +++   +    ++SWN +++ Y + G    A++   +M +  +  D+ ++ S LS
Sbjct: 279 SIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLS 338

Query: 408 ACGNVGSLQLGLQIH--GHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
           AC   G+L+ G  +H       +D  D  + + L+DMY+KCG    A   F+ +++  VV
Sbjct: 339 ACTRQGALETGKWVHELARSRGLD-TDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVV 397

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            W++MI  +  +G   EA+NLF  M    ++ +  T    + AC + G +++G  + + +
Sbjct: 398 SWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSI 457

Query: 526 I-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLND 583
           +  Y +   +     + DM  + G L  A  +   MS + +   W A +    +HG L  
Sbjct: 458 VRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLEL 517

Query: 584 AASLFKQMLDSGIKPNEVTF 603
           A  + K +  SG   N+VTF
Sbjct: 518 AEFVAKDLFQSG--SNDVTF 535


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 188/606 (31%), Positives = 313/606 (51%), Gaps = 66/606 (10%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           SL + C E  +   A+ +H  +L+   + +  L N+ I  Y K G+L  A   F  I + 
Sbjct: 10  SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69

Query: 261 CTTSWTAMISCYNRSGWFQKALESF-----------------------------VKMLEV 291
              SW  ++S Y++ G   +  + F                             V  L +
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 292 KEEP---NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE--- 345
           K+     N IT  T+L  C+    +  G+ ++ QI++ G G +  ++G  L++ Y +   
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDV-FVGSPLVDMYTKLGL 188

Query: 346 ----------------------------CGKMSECEKVIHAIGERNILSWNMLISEYARK 377
                                       CG + E +++   + ER+ +SW ++I+   + 
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQ 436
           G+ +EAL++  +M+  G   D F+  S L+ACG++ +L  G QIH +VI+ D KD  FV 
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           S+L+DMYSKC     A  +F+R+ QK+V+ W +M+ G+ QNG S EA+ +F +M  N +E
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D+ T  + I +C+N+  LE+G   H + +  G+   I +  AL  +Y KCG  + + R+
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           F  M+ R+ VSW+A++  Y   G+ N+   LF++ML  G+KP+ VTF+ +L ACS +G V
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488

Query: 617 EEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           E+G  YF +M +  G+ P + H  C++DLL R+G +E A   I++MP   +   W  LL+
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548

Query: 676 GCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKV 735
            CR+H  +++ K     L      +   Y LLS++YA +G WD+  ++R  M    ++K 
Sbjct: 549 SCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKE 608

Query: 736 PGYSTI 741
           PGYS I
Sbjct: 609 PGYSWI 614



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 261/536 (48%), Gaps = 51/536 (9%)

Query: 85  KMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG 144
           K I++  T   F+  +++ A   LG+L     V   I +           +IL  Y + G
Sbjct: 33  KTIKQPET---FLSNNLITAYYKLGNLAYAHHVFDHIPQPNL----FSWNTILSVYSKLG 85

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV----EPDFVTML 200
            L   +++F+ M  RD VSW+  I+ Y +    S+ ++++  M+++         F TML
Sbjct: 86  LLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTML 145

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK----------------- 243
            L   C +   +   R I+G +L+     D  +G+  + MY+K                 
Sbjct: 146 IL---CSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPER 202

Query: 244 --------------CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
                         CG +  ++R F  +++R + SWT MI+   ++G  ++AL+ F +M 
Sbjct: 203 NVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMR 262

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
                 +  T  +VL +C  L  L EGK +H  +IR        ++G AL++ Y++C  +
Sbjct: 263 LAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV-FVGSALVDMYSKCRSI 321

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
              E V   + ++N++SW  ++  Y + G S+EA+++  +MQ  G+ PD F++ S +S+C
Sbjct: 322 KSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSC 381

Query: 410 GNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
            N+ SL+ G Q H   + +     F  V ++LI +Y KCG    ++ LF  +  +  V W
Sbjct: 382 ANLASLEEGAQFHCRAL-VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSW 440

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLI 526
            +++ G+ Q G + E I LF +M  + L+ D VTF+  + ACS  G +EKG ++    + 
Sbjct: 441 TALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIK 500

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
            +G+   +   T + D+  + G L+ A+   ++M    +VV W+ ++    +HG +
Sbjct: 501 EHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDM 556



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 185/379 (48%), Gaps = 8/379 (2%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I      G +  S+ +F   KE DS  W ++I   M N    E++ ++ +M      + 
Sbjct: 210 MITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMD 269

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            F + SVL AC SL  LG G+++H  +I+     +  + ++++  Y +   +  A  VF 
Sbjct: 270 QFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFK 329

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M  ++V+SW++++  Y  N    E +K+F  M R GVEPD  T+ S+  +C  L SL  
Sbjct: 330 RMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEE 389

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
               H   L   +     + N+ I +Y KCG   ++ R F ++  R   SWTA+++ Y +
Sbjct: 390 GAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQ 449

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYD 333
            G   + +  F +ML    +P+ +T I VL +C+  G + +G      +I++ G+ P  D
Sbjct: 450 FGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVD 509

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKG---MSKEALELLVQ 389
           +    +I+     G++ E    I+ +    +++ W  L+S     G   + K A + L+ 
Sbjct: 510 HC-TCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIA 568

Query: 390 MQTWGLMPDSFSVASSLSA 408
           ++     P S+ + SSL A
Sbjct: 569 LEPQN--PASYVLLSSLYA 585



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 102/192 (53%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA+++ T    +    + L++ Y++  S++S+  VF    + +   W  ++  Y  N 
Sbjct: 291 QIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNG 350

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
           F EE++ ++ +M R      +F   SV+ +C++L  L  G + H R +  G      +  
Sbjct: 351 FSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN 410

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  YG+ G  +++ ++F +M  RD VSW++++A Y      +E + +F  M+  G++P
Sbjct: 411 ALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKP 470

Query: 195 DFVTMLSLAEAC 206
           D VT + +  AC
Sbjct: 471 DGVTFIGVLSAC 482



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 32/193 (16%)

Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
           + + ++ C       + K +H  ++    + + ++   L   Y K G+L  A  VFD + 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 562 ERNV-------------------------------VSWSAMIDCYGMHGQLNDAASLFKQ 590
           + N+                               VSW+  I  Y  +G  +DA  ++K 
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 591 ML-DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
           ML D+ +  N +TF  +L  CS    V+ G+     +  FG   D+   + +VD+ ++ G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 650 DIEGAFKMIHSMP 662
            I  A +    MP
Sbjct: 188 LIYDAKRYFDEMP 200


>gi|302767314|ref|XP_002967077.1| hypothetical protein SELMODRAFT_87452 [Selaginella moellendorffii]
 gi|300165068|gb|EFJ31676.1| hypothetical protein SELMODRAFT_87452 [Selaginella moellendorffii]
          Length = 653

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 191/646 (29%), Positives = 332/646 (51%), Gaps = 25/646 (3%)

Query: 85  KMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC-GFDKDDVIQTSILCTYGEF 143
           +M R ++  +   Y +VLR C+    L  G+++H  I K  G  +D  +   +   YG+ 
Sbjct: 10  EMERAKSQAAPSTYAAVLRRCADDRALEQGQRIHDHIRKFHGLSQDRFLANCLADMYGKC 69

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS-EGLKMFHSMVREGVEPDFVTMLSL 202
           G  D++RK+FD +  ++V SW+ +IA++ ++ D   E L +   M + GV P+  T +S+
Sbjct: 70  GRPDESRKIFDAIADKNVFSWTILIAAFSESVDRRWEALHLLRFMDQSGVAPNAATFVSV 129

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
             AC EL  L    ++H  +    + ++  +G + +  Y KCG +  A+  F K+  + +
Sbjct: 130 LVACSELRCLDAVIALHARIASLGLDLEIVVGTALVNAYGKCGSVDRAKNAFAKMPIKNS 189

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK--SVH 320
             WTA+I+   ++G F  A+E + +M+    +P+ +T ++ L +CA        +  +V 
Sbjct: 190 ICWTAVITANAQNGHFGPAMELYERMVLEGLKPDRVTFVSALDACASSPRSPPPRYRAVV 249

Query: 321 CQIIR----------KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
            Q I            G  P    +  AL+  Y + G++    ++ H++ ERN + WN++
Sbjct: 250 AQRIASLAAAVAASGHGSSP---IVAAALLNMYGKLGELDRAREIFHSLPERNAVMWNVM 306

Query: 371 ISEYARKGMSKEALELLVQMQTWGLM-PDSFSVASSLSACGNVG-SLQLGLQIHGHVIKI 428
           I+  ++ G   EAL     M   G   PD  +  S +SAC   G    L ++IH  ++  
Sbjct: 307 IAASSQAGAIHEALGFFWAMNLDGAARPDGSTFTSIISACAAGGVPPDLAVRIHAALLSS 366

Query: 429 DCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
               D+ + ++L+ +Y+KCG  + A  +F  I++K VV W +++     +G S +A+   
Sbjct: 367 GVTLDDPLLTALLGLYAKCGRTDDARRVFSEIREKGVVPWTALVSALAADGRSSDAVAAL 426

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            +M L  +  +E TF+ AI+A S +G +  G+ +H +  S G+  D ++   +  MYA C
Sbjct: 427 RRMELEGVRPNEYTFVAAIEAASQLG-IAHGRSLHARATSAGLDSDPFVANTVMAMYASC 485

Query: 548 GDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           G +  A+ VFD M   RN+VSW+ MI+    HG   ++ +L+ +M   G+ P+  TF+++
Sbjct: 486 GSIAEARAVFDGMGHRRNLVSWNCMIEALARHGHSLESLALYSEMELDGVPPSAATFVSV 545

Query: 607 LWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSH G VE G  YF A R  +G++ + +H  C+VDLL R+G ++ A   I S+P   
Sbjct: 546 LAACSHVGEVELGYHYFVAFRRDYGIQAEAEHIGCVVDLLGRAGWLDSAESFIQSLPAAD 605

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEK-ELSVTGTNDNGYYTLLSNI 710
             S W  LL  C+ H        +    L V G  D   Y  +SN+
Sbjct: 606 LSSSWAVLLGACKTHGDATRGARVAGWALGVDG-QDAASYVTVSNL 650



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 167/633 (26%), Positives = 307/633 (48%), Gaps = 35/633 (5%)

Query: 3   LFRSCTNLRKL---TRLHAHLL-VTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           + R C + R L    R+H H+    GL  D   +  L + Y + G    SR +FD   + 
Sbjct: 26  VLRRCADDRALEQGQRIHDHIRKFHGLSQDRFLANCLADMYGKCGRPDESRKIFDAIADK 85

Query: 59  DSFMWAVLIKCYMWN-NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           + F W +LI  +  + +   E++ L   M +     +   + SVL ACS L  L +   +
Sbjct: 86  NVFSWTILIAAFSESVDRRWEALHLLRFMDQSGVAPNAATFVSVLVACSELRCLDAVIAL 145

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H RI   G D + V+ T+++  YG+ G +D A+  F KM  ++ + W+++I +   N   
Sbjct: 146 HARIASLGLDLEIVVGTALVNAYGKCGSVDRAKNAFAKMPIKNSICWTAVITANAQNGHF 205

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL---- 233
              ++++  MV EG++PD VT +S  +AC       P R  +  V+ ++I          
Sbjct: 206 GPAMELYERMVLEGLKPDRVTFVSALDACASSPRSPPPR--YRAVVAQRIASLAAAVAAS 263

Query: 234 --GNSFIV------MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             G+S IV      MY K G+L  A   F  + +R    W  MI+  +++G   +AL  F
Sbjct: 264 GHGSSPIVAAALLNMYGKLGELDRAREIFHSLPERNAVMWNVMIAASSQAGAIHEALGFF 323

Query: 286 VKM-LEVKEEPNLITLITVLGSCAGLGWLRE-GKSVHCQIIRKGMGPEYDYLGPALIEFY 343
             M L+    P+  T  +++ +CA  G   +    +H  ++  G+  + D L  AL+  Y
Sbjct: 324 WAMNLDGAARPDGSTFTSIISACAAGGVPPDLAVRIHAALLSSGVTLD-DPLLTALLGLY 382

Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
           A+CG+  +  +V   I E+ ++ W  L+S  A  G S +A+  L +M+  G+ P+ ++  
Sbjct: 383 AKCGRTDDARRVFSEIREKGVVPWTALVSALAADGRSSDAVAALRRMELEGVRPNEYTFV 442

Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQ 461
           +++ A   +G +  G  +H          D FV ++++ MY+ CG    A  +F+ +  +
Sbjct: 443 AAIEAASQLG-IAHGRSLHARATSAGLDSDPFVANTVMAMYASCGSIAEARAVFDGMGHR 501

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           +++V WN MI    ++G+SLE++ L+ +M L+ +     TF++ + ACS++G++E G   
Sbjct: 502 RNLVSWNCMIEALARHGHSLESLALYSEMELDGVPPSAATFVSVLAACSHVGEVELG--- 558

Query: 522 HHKLIS----YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV-VSWSAMIDCYG 576
           +H  ++    YG++ +      + D+  + G L +A+    S+   ++  SW+ ++    
Sbjct: 559 YHYFVAFRRDYGIQAEAEHIGCVVDLLGRAGWLDSAESFIQSLPAADLSSSWAVLLGACK 618

Query: 577 MHGQLNDAASLFKQML--DSGIKPNEVTFMNIL 607
            HG     A +    L  D     + VT  N+L
Sbjct: 619 THGDATRGARVAGWALGVDGQDAASYVTVSNLL 651


>gi|222629606|gb|EEE61738.1| hypothetical protein OsJ_16261 [Oryza sativa Japonica Group]
          Length = 767

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 217/729 (29%), Positives = 356/729 (48%), Gaps = 47/729 (6%)

Query: 19  HLLVTGLHYDPP---ASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           H  V      PP    ST+L+  YA  G + ++R VFD         W  ++  Y  N  
Sbjct: 80  HGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGR 139

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
             E++ L+  M    A  + F Y S   AC+  G   SGE+VH    K  F  D  +Q++
Sbjct: 140 PREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSA 199

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  +   G ++DAR++F +M  +DV   SS               +     +R      
Sbjct: 200 LMDMHLRCGSVEDARQLFAEMGKKDVCCISS--------------WQFPERQIRSTAGSP 245

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            VT         +L     AR + G V     K   P                   R  +
Sbjct: 246 PVTAFP-----PDLHLRHQARHLLGAV---SAKSPPP------------------ARCSM 279

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
           +   R   SWTAM+S Y R+G  ++ALE F  M      PN  T  +   +CAG G  R 
Sbjct: 280 ECPHRSLVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARS 339

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
           G+ VH     KG      ++  AL++ +  CG + +  ++   +G+++++SWN LI  + 
Sbjct: 340 GEQVHA-CAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFV 398

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-F 434
            +G   +AL L   M    ++PD +++ S+L ACG VG       IH  +IK+   DE  
Sbjct: 399 ERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKV 458

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMYLN 493
           V  SLI+ Y+KC   + A ++++ I +  +V   ++I G+  + N S +A+ LF +++  
Sbjct: 459 VIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRK 518

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            L +D V   + +  C+++     G  +H  +       DI +D AL DMYAK G+   A
Sbjct: 519 GLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDA 578

Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
           +R FD M  RNV+SW+++I   G +G   DA +LF +M++ G++PN+VTF+++L AC H 
Sbjct: 579 KRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHC 638

Query: 614 GSVEEGKFYFNA-MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
           G   +G  YF + M  +G++P  +HY+  +DLL+R G +E A+K++       N S+ GA
Sbjct: 639 GLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGA 698

Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
           +L  C++H  + + +T  K L       +  Y +L+N+YAE   W++  + R +++ T  
Sbjct: 699 MLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTD 758

Query: 733 KKVPGYSTI 741
            K  G+S I
Sbjct: 759 GKEVGFSVI 767



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 161/396 (40%), Gaps = 52/396 (13%)

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           + +++E+        L+  + SCA     R+GKSVH ++      P   +L   L+ FYA
Sbjct: 49  YCRLVELNLNIFRFLLLCCISSCA----FRQGKSVHGRVAAASASPPDLHLSTKLVIFYA 104

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
             G ++   KV   +  R+++SW  ++S YAR G  +EALEL   M+  G  P+ F+  S
Sbjct: 105 RFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGS 164

Query: 405 SLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
           + SAC   G  + G Q+H    K     D FVQS+L+DM+ +CG    A  LF  + +K 
Sbjct: 165 AASACAGAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKD 224

Query: 464 VV---MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           V     W            S         ++   L       L A+ A S        + 
Sbjct: 225 VCCISSWQFPERQIRSTAGSPPVTAFPPDLH---LRHQARHLLGAVSAKSPPPARCSMEC 281

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
            H  L+S+         TA+   YA+                               +G+
Sbjct: 282 PHRSLVSW---------TAMVSGYAR-------------------------------NGR 301

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
             +A  LF  M  SG +PN+ T+ +   AC+ +G    G+             D+   + 
Sbjct: 302 PREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSA 361

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           ++D+  R G +E A ++   M    +   W AL+ G
Sbjct: 362 LMDMHLRCGSVEDARQLFAEMG-KKDVVSWNALIRG 396



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 1/174 (0%)

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK-DIYIDTALTDMYAKC 547
             Y   +E++   F   +  C +     +GK VH ++ +      D+++ T L   YA+ 
Sbjct: 47  HFYCRLVELNLNIFRFLLLCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARF 106

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
           GD+  A++VFD M  R+VVSW+AM+  Y  +G+  +A  LF  M  SG +PN+ T+ +  
Sbjct: 107 GDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAA 166

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
            AC+ +G    G+             D+   + ++D+  R G +E A ++   M
Sbjct: 167 SACAGAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEM 220



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 2/160 (1%)

Query: 206 CGELCSLRPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
           C   C+ R  +S+HG V        D  L    ++ Y++ GD+ +A + F  +  R   S
Sbjct: 67  CISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVS 126

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           WTAM+S Y R+G  ++ALE F  M      PN  T  +   +CAG G  R G+ VH    
Sbjct: 127 WTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHA-CA 185

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
            KG      ++  AL++ +  CG + +  ++   +G++++
Sbjct: 186 AKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDV 225



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 1/154 (0%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L  S  + R  T++HA++       D      L++ YA+ G    ++  FD     +   
Sbjct: 533 LCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVIS 592

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG-EKVHGRI 121
           W  LI     N   E+++ L+++M+ +    ++  + S+L AC   G    G E     +
Sbjct: 593 WTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMEYFTSMM 652

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
            + G D      +S +      G L+DA K+  K
Sbjct: 653 SRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQK 686


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 195/653 (29%), Positives = 339/653 (51%), Gaps = 10/653 (1%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y  +++  S  G    G+  H  +IK  F+    +  + L  Y ++G + +A+K+FD+M+
Sbjct: 12  YTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMS 71

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R V+S++ +I+ Y       + + +F       ++ D  +   +  ACG++      + 
Sbjct: 72  ERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKV 131

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IHG  +   +     L N  I MY KC  +  A   F   ++    SW ++I+ Y R G 
Sbjct: 132 IHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGA 191

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSC--AGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           +++ L+  VKM       N  TL + L SC       +  GK++H   +++G+  +   +
Sbjct: 192 YEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDI-VV 250

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR-----KGMSKEALELLVQM 390
           G AL++ YA+ G + +  ++      +N++ +N +I+ + +     K  + EAL+L  QM
Sbjct: 251 GTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQM 310

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
           Q  G+ P  F+ +S +  C ++ + + G QIH H+ K + + DEF+ S+LI++YS  G  
Sbjct: 311 QRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGST 370

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
                 F    +  +V W +MI G+ QNG    A+ LF+++  +  + DE    T + AC
Sbjct: 371 EDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSAC 430

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
           +++     G+ VH   +  G+     +  +   MYAK G+L +A+  F+ +   +VVSWS
Sbjct: 431 ADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWS 490

Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI- 628
            MI     HG   DA +LF+ M   GI PN++TF+ +L ACSH G VEEG  Y+ +M+  
Sbjct: 491 VMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKD 550

Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
           + ++ +++H  C+VDLLSR+G +  A   I +  F  +  +W  LL+GCRI+K I   K 
Sbjct: 551 YDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKH 610

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + ++L      ++  Y LL NIY + G      K+R +M+  G++K PG S I
Sbjct: 611 VAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWI 663



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 279/568 (49%), Gaps = 15/568 (2%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFF 76
           HAH++ T  +         +  Y++ G + +++ +FD   E     + +LI  Y    F+
Sbjct: 32  HAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFY 91

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
            ++I L+ +       +  F Y  VL AC  + D   G+ +HG  I CG  +   +   +
Sbjct: 92  HKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLL 151

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  Y +   +D AR +F+     D VSW+S+I  Y       E LK+   M   G+  + 
Sbjct: 152 IDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNA 211

Query: 197 VTMLSLAEAC----GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            T+ S  ++C      + S    +++HG+ +++ + +D  +G + + MY+K G L  A +
Sbjct: 212 FTLGSALKSCYLNLNNMVSY--GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQ 269

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQK-----ALESFVKMLEVKEEPNLITLITVLGSC 307
            F     +    + AMI+ + ++    K     AL+ F +M     +P+  T  +++  C
Sbjct: 270 LFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKIC 329

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
             +     GK +H  I +  +  + +++G  LIE Y+  G   +  K  ++  + +I+SW
Sbjct: 330 NHIEAFEYGKQIHAHICKHNIQSD-EFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSW 388

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
             +I+ YA+ G  + AL L  ++   G  PD F + + LSAC +V + + G Q+HG+ +K
Sbjct: 389 TTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVK 448

Query: 428 IDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                   VQ+S I MY+K G  + A + FE I+   VV W+ MIC   Q+G++ +AINL
Sbjct: 449 TGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINL 508

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYA 545
           F  M    +  +++TFL  + ACS+ G +E+G ++       Y ++ ++   T + D+ +
Sbjct: 509 FELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLS 568

Query: 546 KCGDLQTAQR-VFDSMSERNVVSWSAMI 572
           + G L  A+  + +S    + V W  ++
Sbjct: 569 RAGRLLDAKNFILNSGFGDHPVMWRTLL 596



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 238/471 (50%), Gaps = 17/471 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H   +V GL      +  LI+ Y +   +  +RL+F++  E D+  W  LI  Y     
Sbjct: 132 IHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGA 191

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLGS-GEKVHGRIIKCGFDKDDVIQ 133
           +EE + L  KM      ++ F   S L++C  +L ++ S G+ +HG  +K G D D V+ 
Sbjct: 192 YEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVG 251

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS-----EGLKMFHSMV 188
           T++L  Y + G L DA ++F    +++VV ++++IA +    D+      E LK+F  M 
Sbjct: 252 TALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQ 311

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R+G++P   T  S+ + C  + +    + IH H+ +  I+ D  +G++ I +YS  G   
Sbjct: 312 RQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTE 371

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
              + F    K    SWT MI+ Y ++G F+ AL  F ++L   ++P+   + T+L +CA
Sbjct: 372 DQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACA 431

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +   R G+ VH   ++ G+G     +  + I  YA+ G +   +     I   +++SW+
Sbjct: 432 DVAAERSGEQVHGYAVKTGIGT-LAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWS 490

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH-----G 423
           ++I   A+ G +K+A+ L   M+++G+ P+  +    L+AC + G ++ GL+ +      
Sbjct: 491 VMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKD 550

Query: 424 HVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICG 473
           + +KI+ K     + ++D+ S+ G   +    +         VMW +++ G
Sbjct: 551 YDMKINVKH---CTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 98/192 (51%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HAH+    +  D    + LIE Y+ +GS       F++  + D   W  +I  Y  N 
Sbjct: 340 QIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNG 399

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            FE ++ L+++++        FI  ++L AC+ +    SGE+VHG  +K G     ++Q 
Sbjct: 400 QFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQN 459

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S +  Y + G LD A+  F+++ + DVVSWS +I S   +    + + +F  M   G+ P
Sbjct: 460 SQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHP 519

Query: 195 DFVTMLSLAEAC 206
           + +T L +  AC
Sbjct: 520 NQITFLGVLTAC 531



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C ++   R   ++H + + TG+          I  YA+ G+L S+++ F+  K PD
Sbjct: 426 MLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPD 485

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
              W+V+I     +   +++I L+  M       +   +  VL ACS  G +  G
Sbjct: 486 VVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG 540


>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
 gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
          Length = 662

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 186/610 (30%), Positives = 317/610 (51%), Gaps = 9/610 (1%)

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           +L +Y   G   DA  +  +M     VS S+ +   +     +      +S +R     D
Sbjct: 51  LLGSYCACGRPFDAHNLLVQMPQPPPVSVSNTLLRSYTGLGFNRQALALYSQMRAF---D 107

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
            +T    A+AC +L   R  R++HG  L      DG + N+ + MY +C D++SAE  F 
Sbjct: 108 HLTFTFAAKACADLRRRRHGRAVHGRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAVFG 167

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
            +  R T SW  +I+   + G  ++ALE F  M+      +  T+++VL +CA    L  
Sbjct: 168 ALRSRTTVSWNTVITGCVKDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDLHM 227

Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEY 374
           G++VH   + +G+G  Y  +  ALI+ Y +C  + + ++V      +++++SW  +I  Y
Sbjct: 228 GRAVHRLAVVRGLG-NYAAVKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGAY 286

Query: 375 ARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KD 432
                + +A  L  +M  T    P++ ++   LSAC ++ S +     H   I++    D
Sbjct: 287 VLNDHASKAFALGSEMLVTSEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGSD 346

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
             V+++L+D Y+KCG+  +  ++ E+  +++   WN+ I G+       +A+ LF QM  
Sbjct: 347 TVVETALVDCYAKCGYMGMIDMVVEKGSRRTET-WNAAISGYTHREQGKKALALFKQMLA 405

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
             +  D  T  + I A +    L + K +H  L+  G      I T L ++YAK GDL  
Sbjct: 406 ESVRPDSATMASVIPAYAESADLVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAGDLGV 465

Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
           A  +F  + E++VV+W+ +I  YGMHG    A  L+ +M++ G+ PN VT  +++++CSH
Sbjct: 466 AWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSH 525

Query: 613 SGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
           +G V+EG   FN MR + G+ P+ +HY C+VD+L R+G IE A+++I  MPF  + S+W 
Sbjct: 526 AGMVDEGLRLFNDMRGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWS 585

Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
           ALL  C +H+ ++  +   K L     ++ G Y LL  +YA    W +   +  +ME  G
Sbjct: 586 ALLGACVLHENVEFGEVAAKHLFELEPDNVGNYVLLGKVYAAADRWSDVQDLWRVMEGRG 645

Query: 732 LKKVPGYSTI 741
           L K PG S +
Sbjct: 646 LHKDPGSSVV 655



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 164/596 (27%), Positives = 282/596 (47%), Gaps = 18/596 (3%)

Query: 14  TRLHAHLLVTG--LHYDPPASTRLIESYAEMG-SLRSSRLVFDTFKEPDSFMWAVLIKCY 70
            +LHA LL +G  LH D  +   L+ SY   G    +  L+    + P   +   L++ Y
Sbjct: 30  AQLHALLLKSGHLLHCD--SIHLLLGSYCACGRPFDAHNLLVQMPQPPPVSVSNTLLRSY 87

Query: 71  MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
               F  +++ LY +M        +  +    +AC+ L     G  VHGR +  GF  D 
Sbjct: 88  TGLGFNRQALALYSQM----RAFDHLTFTFAAKACADLRRRRHGRAVHGRALTAGFGGDG 143

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
            +Q +++  Y     +  A  VF  + SR  VSW+++I     +      L++F +MV  
Sbjct: 144 YVQNALVSMYMRCRDVVSAEAVFGALRSRTTVSWNTVITGCVKDGRAERALEVFETMVGR 203

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           GV  D  T++S+  AC +   L   R++H   + R +     + N+ I MY KC  L  A
Sbjct: 204 GVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAAVKNALIDMYGKCRSLEDA 263

Query: 251 ERTFVKIE-KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCA 308
           +R F +    +   SWTAMI  Y  +    KA     +ML   E +PN +T++ +L +C 
Sbjct: 264 KRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVTSEAQPNAVTMVHLLSACT 323

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            L   +  K  H   IR G+G +   +  AL++ YA+CG M   + V+   G R   +WN
Sbjct: 324 SLLSGKHAKCTHALCIRLGLGSD-TVVETALVDCYAKCGYMGMIDMVVEK-GSRRTETWN 381

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
             IS Y  +   K+AL L  QM    + PDS ++AS + A      L     IH  ++  
Sbjct: 382 AAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYAESADLVQAKNIHCCLLIR 441

Query: 429 DC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
            C     + + LI++Y+K G   +A+ LF+ + +K VV W ++I G+  +G++  AI L+
Sbjct: 442 GCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAILLY 501

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAK 546
            +M    +  + VT  + + +CS+ G +++G  + + +   +G+  +      L DM  +
Sbjct: 502 SRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRLFNDMRGVHGLMPNAEHYLCLVDMLGR 561

Query: 547 CGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
            G ++ A R+   M  E +   WSA++    +H  +       K + +  ++P+ V
Sbjct: 562 AGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHENVEFGEVAAKHLFE--LEPDNV 615



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +    +L +   +H  LL+ G       +T LI  YA+ G L  +  +F    E D 
Sbjct: 419 IPAYAESADLVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKDV 478

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
             W  +I  Y  +   + +ILLY +MI    T +     S++ +CS  G +  G ++
Sbjct: 479 VAWTTVIAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRL 535


>gi|302785287|ref|XP_002974415.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
 gi|300158013|gb|EFJ24637.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
          Length = 659

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 186/665 (27%), Positives = 338/665 (50%), Gaps = 25/665 (3%)

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           M+  LI  Y  +N    +  L  +M  +    +      +L AC++L  +  G+++H  I
Sbjct: 3   MYTALIGAYARSNDPSAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQWI 62

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           I  G  +D V+ T++L T+   G LD A+  F  +  +D+++W++II +   +    E L
Sbjct: 63  IDLGLHRDSVLGTALLTTFARSGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHEAL 122

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVM 240
            +F  M  +G+ P+ +T++++     E  S   AR++H   +   +      +GNS + M
Sbjct: 123 DLFRRMQLDGIHPNAITLVAVLSIFQE--SSTDARAVHSLAMESAMDESSVAVGNSIVNM 180

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y++C DL  A   F +I+ +   SW  MIS +++       L  F  M+    + +  T 
Sbjct: 181 YARCRDLDRARLAFARIQSKNVVSWNVMISAHSQLDRLHP-LAMFHAMMLEGIKADATTF 239

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIH 357
           + +    A    LR+G+ +H      G G    Y   L  +L+  +A+CG ++    + H
Sbjct: 240 VNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARDIFH 299

Query: 358 A---IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                 ERN + WN +I+   +     +AL L   MQ  G+  D+ +  S++ AC  +  
Sbjct: 300 ENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDACTALED 359

Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
              G  +HG + +   + D  V ++L++ YSK    + A   F+RI +  +V WN +I  
Sbjct: 360 FSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIPEPDLVAWNVLIAA 419

Query: 474 FYQNGNSLEAINL-FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
              N +S  A+ + FH+M    L+ D +TF+T + AC     L  G+ +H ++   G+  
Sbjct: 420 HVDNADSSTALEIFFHRME---LKPDRITFITTLAACVTASALPLGRRLHEQIRQRGLHS 476

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           D+ + +AL DMY+KCG L+ A +VF +M+  RN  +W+A+I  +  HG    A SL ++M
Sbjct: 477 DVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVREM 536

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM---RIFGVEPDLQHYACMVDLLSRS 648
              G++P+ +T++ +L ACSH+G +E+G  +F A+   +   V+   +HY C+VDLL R+
Sbjct: 537 QLEGVEPDSLTYVGLLLACSHAGLLEDGCKFFAALVEDKRLAVKE--EHYGCVVDLLGRA 594

Query: 649 GDIEGAFKMI----HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
           G +  A + +     +MP  A+ ++W +LL+ C +H  +++ +   + +          +
Sbjct: 595 GKLAEAEEFLLGLRRAMPVAASAAMWTSLLSACGVHGDMELARRAARRVLDLEPRHPAAF 654

Query: 705 TLLSN 709
            +LSN
Sbjct: 655 VVLSN 659



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 161/617 (26%), Positives = 283/617 (45%), Gaps = 39/617 (6%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +CT L  +    R+H  ++  GLH D    T L+ ++A  GSL  ++  F      D
Sbjct: 42  ILSACTALHSIHLGDRIHQWIIDLGLHRDSVLGTALLTTFARSGSLDRAKAAFTAIARKD 101

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL----GSGE 115
              W  +I     +N   E++ L+ +M  +       I+P+ +   + L           
Sbjct: 102 LIAWNAIITATSHSNRSHEALDLFRRMQLDG------IHPNAITLVAVLSIFQESSTDAR 155

Query: 116 KVHGRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
            VH   ++   D+  V +  SI+  Y     LD AR  F ++ S++VVSW+ +I+++   
Sbjct: 156 AVHSLAMESAMDESSVAVGNSIVNMYARCRDLDRARLAFARIQSKNVVSWNVMISAH-SQ 214

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR----RKIKID 230
            D    L MFH+M+ EG++ D  T ++LA        LR    +H         R +  D
Sbjct: 215 LDRLHPLAMFHAMMLEGIKADATTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYD 274

Query: 231 GPLGNSFIVMYSKCGDLLSAERTF---VKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
             L  S + M++KCG +  A   F       +R    W A+I+   ++  F  AL  F  
Sbjct: 275 AVLATSLVTMFAKCGSVAHARDIFHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRT 334

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAEC 346
           M       + IT ++ + +C  L     G+++H  I    +  E D +   AL+ FY++ 
Sbjct: 335 MQLQGVPSDAITFVSTIDACTALEDFSTGRALHGIISESSL--ETDTIVATALVNFYSKS 392

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
            ++         I E ++++WN+LI+ +     S  ALE+        L PD  +  ++L
Sbjct: 393 RRLDAATAAFQRIPEPDLVAWNVLIAAHVDNADSSTALEIFFHRME--LKPDRITFITTL 450

Query: 407 SACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSV 464
           +AC    +L LG ++H  + +     D  V S+L+DMYSKCG    AY +F  +  +++ 
Sbjct: 451 AACVTASALPLGRRLHEQIRQRGLHSDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNS 510

Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
             WN++I G  Q+G S  A +L  +M L  +E D +T++  + ACS+ G LE G      
Sbjct: 511 ATWNALIAGHAQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACSHAGLLEDGCKFFAA 570

Query: 525 LIS---YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-----WSAMIDCYG 576
           L+      V+++ Y    + D+  + G L  A+     +     V+     W++++   G
Sbjct: 571 LVEDKRLAVKEEHY--GCVVDLLGRAGKLAEAEEFLLGLRRAMPVAASAAMWTSLLSACG 628

Query: 577 MHGQLNDAASLFKQMLD 593
           +HG +  A    +++LD
Sbjct: 629 VHGDMELARRAARRVLD 645



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 257/549 (46%), Gaps = 13/549 (2%)

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
           V  ++++I +Y  + D S    +   M  +G+ P+ +T++ +  AC  L S+     IH 
Sbjct: 1   VAMYTALIGAYARSNDPSAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQ 60

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
            ++   +  D  LG + +  +++ G L  A+  F  I ++   +W A+I+  + S    +
Sbjct: 61  WIIDLGLHRDSVLGTALLTTFARSGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHE 120

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           AL+ F +M      PN ITL+ VL          + ++VH   +   M      +G +++
Sbjct: 121 ALDLFRRMQLDGIHPNAITLVAVLSIFQESS--TDARAVHSLAMESAMDESSVAVGNSIV 178

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             YA C  +         I  +N++SWN++IS +++       L +   M   G+  D+ 
Sbjct: 179 NMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQLD-RLHPLAMFHAMMLEGIKADAT 237

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKID-----CKDEFVQSSLIDMYSKCGFKNLAYLL 455
           +  +  S       L+ G  +H    ++        D  + +SL+ M++KCG    A  +
Sbjct: 238 TFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARDI 297

Query: 456 FE---RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
           F       +++ V+WN++I    QN +  +A+ LF  M L  +  D +TF++ I AC+ +
Sbjct: 298 FHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDACTAL 357

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
                G+ +H  +    +  D  + TAL + Y+K   L  A   F  + E ++V+W+ +I
Sbjct: 358 EDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIPEPDLVAWNVLI 417

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             +  +   + A  +F   ++  +KP+ +TF+  L AC  + ++  G+     +R  G+ 
Sbjct: 418 AAHVDNADSSTALEIFFHRME--LKPDRITFITTLAACVTASALPLGRRLHEQIRQRGLH 475

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
            D+   + +VD+ S+ G +E A+K+  +M    N + W AL+ G   H       ++ +E
Sbjct: 476 SDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVRE 535

Query: 693 LSVTGTNDN 701
           + + G   +
Sbjct: 536 MQLEGVEPD 544


>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
 gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 192/636 (30%), Positives = 335/636 (52%), Gaps = 10/636 (1%)

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEF--GCLDDARKVFDKMTSRDVVSWSSIIASYF 172
            ++H  ++  G+    V+   ++  Y     G L  A +VFD M +R+  +W+++I    
Sbjct: 61  RRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNAVIKGLV 120

Query: 173 DNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHV----LRRKI 227
           D    SE L+ +  MV +G V  D  T   + +AC  L  +   R +  +V     R   
Sbjct: 121 DAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEADIARGIA 180

Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
           K +  +  + + M++KCG L  A   F  +E R   +WTAMI      G + + +    +
Sbjct: 181 KCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKR 240

Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
           M      P+ + L TV+ +C  +  LR G ++H  +++ G+G +   L  AL++ Y +C 
Sbjct: 241 MKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLN-ALVDMYCKCA 299

Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
           ++     +  +I  ++++SW+ +I+ +++      ++ L  +M   G+ P+S ++AS L 
Sbjct: 300 RLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILP 359

Query: 408 ACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           +   +   + G +IH   ++   +  EF+ S+LID YS+ G    A ++FE   +  +V+
Sbjct: 360 SLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVV 419

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
            NSMI G+  N +S  A+ L   +    L  D VT ++ +  C+   +L +GK +H   I
Sbjct: 420 SNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAI 479

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
            + +     +  ALTDMY KCG L+ A  +F  M+ERN V+++ +I   G HG    A  
Sbjct: 480 RHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFF 539

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLL 645
           LF  M   G+ P++VTF+ +L  CSH G +++G  ++++M R + + PD +HY+C+VDL 
Sbjct: 540 LFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDLY 599

Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYT 705
           SRSG ++ A+  I ++       + G LL+ CR H R+D+ + + + +     ND GY+ 
Sbjct: 600 SRSGRLDAAWSFIANLQEVPEIDVLGCLLSACREHNRMDIAELVAERIFEQNPNDPGYHI 659

Query: 706 LLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           LLSNIYA  G W E  ++R+++E   LKK  G S I
Sbjct: 660 LLSNIYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 695



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 296/568 (52%), Gaps = 10/568 (1%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEM--GSLRSSRLVFDTFKEPDSF 61
            +S   L ++ RLHA LLV G       + +L+ +YA +  G L  +  VFD     +SF
Sbjct: 51  LQSGPALTEVRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSF 110

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGR 120
            W  +IK  +    F E++  Y  M+ + + +++ F YP VL+AC++LG +  G KV   
Sbjct: 111 AWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQEN 170

Query: 121 I---IKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +   I  G  K +V +Q +++  + + GCL +AR VF+ M  RD+ +W+++I       D
Sbjct: 171 VEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGD 230

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
             E + +   M  EG  PD + + ++  ACG++  LR   ++HG V++  + +D  + N+
Sbjct: 231 WLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNA 290

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            + MY KC  L  A   F  I+ +   SW+ +I+ ++++  +  ++  F +M+    +PN
Sbjct: 291 LVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPN 350

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             TL ++L S + L   R GK +HC  +R G+    ++L  ALI+FY+  G + E E V 
Sbjct: 351 STTLASILPSLSELRLFRYGKEIHCFSLRNGL-EHSEFLASALIDFYSRQGSIKEAEIVF 409

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
               + +++  N +I  Y     S+ AL LL  +   GL PD  +V S L  C     L 
Sbjct: 410 EFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLL 469

Query: 417 LGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
            G ++H + I+ +      V ++L DMY KCG   LA+ +F  + +++ V +N++I    
Sbjct: 470 QGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLG 529

Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDI 534
           ++G++ +A  LF  M  + +  D+VTF+  +  CS+ G ++KG   +  ++  Y +  D 
Sbjct: 530 KHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDK 589

Query: 535 YIDTALTDMYAKCGDLQTAQRVFDSMSE 562
              + + D+Y++ G L  A     ++ E
Sbjct: 590 EHYSCIVDLYSRSGRLDAAWSFIANLQE 617



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 164/350 (46%), Gaps = 2/350 (0%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P       LR  T LH  ++  G+  D      L++ Y +   L  +  +F +    D 
Sbjct: 257 IPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDV 316

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W+ +I  +  N  +  S+ L+ +M+      ++    S+L + S L     G+++H  
Sbjct: 317 ISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCF 376

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            ++ G +  + + ++++  Y   G + +A  VF+     D+V  +S+I  Y  N D    
Sbjct: 377 SLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESA 436

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L++  ++++EG+ PD VT++S+   C +   L   + +H + +R  I     + N+   M
Sbjct: 437 LRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDM 496

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG L  A   F+ + +R T ++  +IS   + G  ++A   F  M      P+ +T 
Sbjct: 497 YCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTF 556

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKM 349
           + +L  C+  G + +G   +  ++R   + P+ ++    +++ Y+  G++
Sbjct: 557 VALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHYS-CIVDLYSRSGRL 605


>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
 gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
          Length = 673

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 181/560 (32%), Positives = 306/560 (54%), Gaps = 22/560 (3%)

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARS-------IHGHVLRRKIKIDGPLGNSFIV 239
           M  +G  P+ V    L EAC       P +S       I   V+      D  +  + I 
Sbjct: 1   MELDGCRPNAVIFTRLLEACAR----SPEKSDRSRLAEIQFRVVATGFDADVTVATALIS 56

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
             ++CGDL  A   F +I  +   SW +MI+  N  G F +ALE + +M     +P+ I+
Sbjct: 57  ALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDIS 116

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            I  L SC+GL  L +GKS+H ++   G   +  ++G AL+  Y++C ++    +    I
Sbjct: 117 YIHALCSCSGLRDLEQGKSIHDRVATDGFDTQV-FVGNALVNMYSKCRRLDLAREAFERI 175

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLG 418
             ++++SWN +I+ +++ G S EALE   +M     L P   ++  +L A  ++ S    
Sbjct: 176 DSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDT 235

Query: 419 LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
             +    I++  + D  V S+L+    KCG  + A  +F+R+++++VV W+ +I    ++
Sbjct: 236 KLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEH 295

Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
           G   +AI LFH+M L+ ++ +EVT L+ ++AC++ G + +G+  H ++   G   +  + 
Sbjct: 296 GRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVA 355

Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            AL +MY KCG L +A+ VFD+M+ RNVVSW+AM+  Y  HG   +A  +FK M   GI+
Sbjct: 356 NALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQ 415

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
           PN +TF+++L+ CSH+G V +G   F+ M   FG+ P  +HY C++DLL R+G +E A +
Sbjct: 416 PNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEE 475

Query: 657 MIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK---ELSVTGTNDNGYYTLLSNIYAE 713
           ++ +MP   + + W +LL  C++H   D  K I K   +L++     +  Y LLSN+Y +
Sbjct: 476 LLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFA--SAPYVLLSNMYTD 533

Query: 714 EGNWD--EFGKVRSIMEVTG 731
           E      E  +  S++EV G
Sbjct: 534 EEQQSDPEEDQCSSLIEVKG 553



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 263/505 (52%), Gaps = 10/505 (1%)

Query: 97  IYPSVLRACS---SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
           I+  +L AC+      D     ++  R++  GFD D  + T+++      G L+ AR+ F
Sbjct: 12  IFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGAREAF 71

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D++ +++VVSW+S+IA+  ++   +  L+++  M  EGV+P  ++ +    +C  L  L 
Sbjct: 72  DRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLE 131

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             +SIH  V          +GN+ + MYSKC  L  A   F +I+ +   SW +MI+ ++
Sbjct: 132 QGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHS 191

Query: 274 RSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
           + G   +ALE++ +M+ E + EP  ITL+  LG+   L    + K +    IR G+  E 
Sbjct: 192 QLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGL--EG 249

Query: 333 DYL-GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
           D L G AL+    +CG + +   V   +  RN++SW+ LI+  A  G  ++A+EL  +M 
Sbjct: 250 DLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMD 309

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKN 450
             G+ P+  ++ S L AC + G++  G + H  V     + E  V ++L++MY KCG   
Sbjct: 310 LDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLG 369

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
            A  +F+ +  ++VV W +M+ G+  +G++ EA  +F  M L  ++ + +TF++ +  CS
Sbjct: 370 SARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCS 429

Query: 511 NIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSW 568
           + G +  G    H ++  +G+         + D+  + G L+ A+ +  +M  E +  +W
Sbjct: 430 HAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAW 489

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLD 593
           ++++    +H   + A  + K   D
Sbjct: 490 NSLLGACKVHSHTDRAKRIAKLACD 514



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 229/473 (48%), Gaps = 15/473 (3%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++  +L  +   ++ TG   D   +T LI + A  G L  +R  FD     +   W  +I
Sbjct: 27  SDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMI 86

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
                +  F  ++ +Y +M  E    S+  Y   L +CS L DL  G+ +H R+   GFD
Sbjct: 87  AALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFD 146

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
               +  +++  Y +   LD AR+ F+++ S+DVVSW+S+IA++       E L+ +  M
Sbjct: 147 TQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRM 206

Query: 188 V-REGVEPDFVTMLSLAEACGELCSLRPA---RSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           +  E +EP   T ++L  A G   SLR A   + +    +R  ++ D  +G++ +    K
Sbjct: 207 IGEERLEP---TKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGK 263

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
           CG L  A   F ++E+R   SW+ +I+     G  + A+E F +M     +PN +TL++V
Sbjct: 264 CGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSV 323

Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
           L +CA  G + EG+  H ++   G   E + +  AL+  Y +CG +     V  A+  RN
Sbjct: 324 LEACASTGAIAEGRRTHARVSGCGFEAETN-VANALVNMYGKCGHLGSARTVFDAMTWRN 382

Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL-QIH 422
           ++SW  +++ YA  G ++EA  +   M   G+ P+  +  S L  C + G +  GL Q H
Sbjct: 383 VVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFH 442

Query: 423 ---GHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
              G    +   + +    +ID+  + G+   A  L   +  +     WNS++
Sbjct: 443 IMVGDFGIVPVTEHY--GCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLL 493



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 183/372 (49%), Gaps = 7/372 (1%)

Query: 6   SCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC+ LR L +   +H  +   G          L+  Y++   L  +R  F+     D   
Sbjct: 123 SCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVS 182

Query: 63  WAVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           W  +I  +      +E++  Y +MI  E+   +       L A  SL   G  + +    
Sbjct: 183 WNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDA 242

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           I+ G + D ++ ++++   G+ GCLD AR VFD+M  R+VVSWS +IA+  ++    + +
Sbjct: 243 IRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAI 302

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
           ++FH M  +G++P+ VT+LS+ EAC    ++   R  H  V     + +  + N+ + MY
Sbjct: 303 ELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMY 362

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KCG L SA   F  +  R   SWTAM++ Y   G  ++A   F  M     +PN+IT +
Sbjct: 363 GKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFV 422

Query: 302 TVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +VL +C+  G + +G +  H  +   G+ P  ++ G  +I+     G + E E+++  + 
Sbjct: 423 SVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYG-CVIDLLGRAGWLEEAEELLRTMP 481

Query: 361 -ERNILSWNMLI 371
            E +  +WN L+
Sbjct: 482 VEPDKAAWNSLL 493


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 188/537 (35%), Positives = 295/537 (54%), Gaps = 20/537 (3%)

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  + R  +     L N  ++M +K G L  A   F  I+ +   SW  +IS Y   G 
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI-IRKGMGPEYDYLG 336
              AL  F KM      P  +T  T L +C+ LG L+ G+ +H +I   +G+ P    L 
Sbjct: 123 PSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSV-ILD 178

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK-EALELLVQMQTWGL 395
            A+   YA+CG +S  + V   I  +N++SWN LI+ YA+ G S  +AL+L  +M   G+
Sbjct: 179 TAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGV 238

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVI----KIDCKDEFVQSSLIDMYSKCGFKNL 451
            P   +    L AC +V SL+   +IH  ++    + D +D  VQ++L++MY+KCG   +
Sbjct: 239 RPCRATFVGVLGACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEV 295

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F ++Q++  V  N MI  F Q G   E+I +F +M L  L  D+ TF + I ACS 
Sbjct: 296 ARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSC 355

Query: 512 IGQLEKGKWVHHKLISYGV-RK----DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            G LE GK +H +++   + RK    ++ ++TAL  MY KCG L+ A+ VF +M+ +N V
Sbjct: 356 CGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSV 415

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           SW+AM+      GQ ++AA+  +     G++ +  +F+++L ACSHSG +E    +F  M
Sbjct: 416 SWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLM 475

Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
              F + P  ++Y CMVDLL+RSG +  A ++++SMPF  +   W  LL GCR+   ++ 
Sbjct: 476 LSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLEN 535

Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK-VPGYSTI 741
             +  ++       +   YTLLS++Y+  G  DE  ++RS M+  GL+K VPG S I
Sbjct: 536 AASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVI 592



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 255/523 (48%), Gaps = 25/523 (4%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           + + +R+C    D  S   +H +I + G      +   ++    + G L +AR +FD + 
Sbjct: 47  FAAAIRSCK---DSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQ 103

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            +++ SW+ II++Y      S  L +F  M    V P  +T  +   AC  L  L+  R 
Sbjct: 104 HKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGRE 160

Query: 218 IHGHV-LRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           IH  +   R I+    L  +   MY+KCGDL +A+  F +I  +   SW A+I+ Y +SG
Sbjct: 161 IHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSG 220

Query: 277 W-FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
               +AL+ F KM E    P   T + VLG+C  +  L +   +H +I+  G+  +   +
Sbjct: 221 HSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEK---IHARIVETGLQFDVRDV 277

Query: 336 G--PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
           G   AL+  YA+CG +     +   +  R+ +S N++I+ +A++G+ KE++++  +M   
Sbjct: 278 GVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLE 337

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI------KIDCKDEFVQSSLIDMYSKCG 447
           GL  D  + AS ++AC   G+L+ G +IH  V+      K    +  V+++L+ MY KCG
Sbjct: 338 GLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCG 397

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
               A  +F+ +  K+ V WN+M+      G   EA           +E+D  +F++ + 
Sbjct: 398 TLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLI 457

Query: 508 ACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERN 564
           ACS+ G LE   + H +L+   + +         + D+ A+ G L  A  + +SM    +
Sbjct: 458 ACSHSGMLEVA-YDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPD 516

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
            ++W  ++    + G L +AAS  +Q  +  ++P       +L
Sbjct: 517 AIAWRTLLGGCRVQGSLENAASAAEQAFN--LEPQNTAPYTLL 557



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 17/425 (4%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
            RSC +   ++ +H  +   GL      +  L+   A+ GSL  +R +FD  +  + F W
Sbjct: 51  IRSCKDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSW 110

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
            ++I  Y        ++ L+ KM       +   + + L ACSSLGDL  G ++H RI  
Sbjct: 111 NIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKA 167

Query: 124 C-GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV-SEGL 181
             G     ++ T+I   Y + G L  A+ VFD++ +++VVSW+++IA+Y  +     + L
Sbjct: 168 SRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQAL 227

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNSFI 238
            +F  M   GV P   T + +  AC ++ SL     IH  ++   ++ D     + N+ +
Sbjct: 228 DLFEKMAEHGVRPCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNALL 284

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG L  A   F K+++R   S   MI+ + + G  +++++ F +M       +  
Sbjct: 285 NMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDT 344

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMG-----PEYDYLGPALIEFYAECGKMSECE 353
           T  +V+ +C+  G L  GK +H +++   +G     P    +  AL+  Y +CG + + +
Sbjct: 345 TFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNV-VVETALVSMYGKCGTLEQAK 403

Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            V  A+  +N +SWN +++  A +G   EA   L      G+  DS S  S L AC + G
Sbjct: 404 AVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSG 463

Query: 414 SLQLG 418
            L++ 
Sbjct: 464 MLEVA 468



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 196/433 (45%), Gaps = 33/433 (7%)

Query: 6   SCTNLRKLTR---LHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           +C++L  L R   +HA +  + G+       T +   YA+ G L +++ VFD     +  
Sbjct: 148 ACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVV 207

Query: 62  MWAVLIKCYMWNNFFEESIL-LYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            W  LI  Y  +       L L+ KM           +  VL AC+   D+ S EK+H R
Sbjct: 208 SWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACN---DVTSLEKIHAR 264

Query: 121 IIKCG--FDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           I++ G  FD  DV +Q ++L  Y + G L+ AR +F KM  RD VS + +IA++      
Sbjct: 265 IVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLG 324

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN-- 235
            E +++F  M  EG+  D  T  S+  AC    +L   + IH  V+   +     L N  
Sbjct: 325 KESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVV 384

Query: 236 ---SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
              + + MY KCG L  A+  F  +  + + SW AM++     G   +A           
Sbjct: 385 VETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEG 444

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA-----LIEFYAECG 347
            E +  + I+VL +C+  G L E    H Q+    M  ++D +  A     +++  A  G
Sbjct: 445 VELDSASFISVLIACSHSGML-EVAYDHFQL----MLSDFDLVPAAENYRCMVDLLARSG 499

Query: 348 KMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS---FSVA 403
           ++ + +++++++    + ++W  L+     +G  + A       Q + L P +   +++ 
Sbjct: 500 RLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAAS--AAEQAFNLEPQNTAPYTLL 557

Query: 404 SSL-SACGNVGSL 415
           SSL SA G    L
Sbjct: 558 SSLYSATGKKDEL 570


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 172/498 (34%), Positives = 291/498 (58%), Gaps = 7/498 (1%)

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A + F K+ +R   +WT MI+ + + G  + A++ F+ M      P+  T  +VL +C  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC---GKMSECEKVIHAIGERNILS 366
           LG L  GK +H ++IR G+  +   +G +L++ YA+C   G + +  KV   + E N++S
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDV-CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122

Query: 367 WNMLISEYARKG-MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           W  +I+ YA+ G   KEA+EL  +M +  + P+ FS +S L ACGN+     G Q++ + 
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 426 IKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K+       V +SLI MY++ G    A   F+ + +K++V +N+++ G+ +N  S EA 
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF+++    + +   TF + +   ++IG + KG+ +H +L+  G + +  I  AL  MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           ++CG+++ A +VF+ M +RNV+SW++MI  +  HG    A  +F +ML++G KPNE+T++
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +L ACSH G + EG+ +FN+M +  G+ P ++HYACMVDLL RSG +  A + I+SMP 
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
            A+  +W  LL  CR+H   ++ +   + +     +D   Y LLSN++A  G W +  K+
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R  M+   L K  G S I
Sbjct: 483 RKSMKERNLIKEAGCSWI 500



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 233/439 (53%), Gaps = 8/439 (1%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A KVFDKM  R++V+W+ +I  +       + + +F  M   G  PD  T  S+  AC E
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC---GDLLSAERTFVKIEKRCTTSW 265
           L  L   + +H  V+R  + +D  +G S + MY+KC   G +  + + F ++ +    SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 266 TAMISCYNRSGWFQK-ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           TA+I+ Y +SG   K A+E F KM+     PN  +  +VL +C  L     G+ V+   +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
           + G+    + +G +LI  YA  G+M +  K    + E+N++S+N ++  YA+   S+EA 
Sbjct: 184 KLGIA-SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
            L  ++   G+   +F+ AS LS   ++G++  G QIHG ++K   K ++ + ++LI MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           S+CG    A+ +F  ++ ++V+ W SMI GF ++G +  A+ +FH+M     + +E+T++
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362

Query: 504 TAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS- 561
             + ACS++G + +G K  +     +G+   +     + D+  + G L  A    +SM  
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422

Query: 562 ERNVVSWSAMIDCYGMHGQ 580
             + + W  ++    +HG 
Sbjct: 423 MADALVWRTLLGACRVHGN 441



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 246/520 (47%), Gaps = 38/520 (7%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VFD   E +   W ++I  +       ++I L+  M         F Y SVL AC+ LG 
Sbjct: 7   VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF---GCLDDARKVFDKMTSRDVVSWSSI 167
           L  G+++H R+I+ G   D  +  S++  Y +    G +DD+RKVF++M   +V+SW++I
Sbjct: 67  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126

Query: 168 IASYFDNADVS-EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           I +Y  + +   E +++F  M+   + P+  +  S+ +ACG L        ++ + ++  
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           I     +GNS I MY++ G +  A + F  + ++   S+ A++  Y ++   ++A   F 
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           ++ +     +  T  ++L   A +G + +G+ +H ++++ G       +  ALI  Y+ C
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN-QCICNALISMYSRC 305

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G +    +V + + +RN++SW  +I+ +A+ G +  ALE+  +M   G  P+  +  + L
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           SAC +VG +  G                 Q     MY + G       +  R++      
Sbjct: 366 SACSHVGMISEG-----------------QKHFNSMYKEHG-------IVPRMEH----- 396

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           +  M+    ++G  +EA+   + M L     D + + T + AC   G  E G+    ++I
Sbjct: 397 YACMVDLLGRSGLLVEAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGRHA-AEMI 452

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
                 D      L++++A  G  +   ++  SM ERN++
Sbjct: 453 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 492



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 216/453 (47%), Gaps = 43/453 (9%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEM---GSLRSSRLVFDTFK 56
           +  +CT L  L    +LH+ ++  GL  D      L++ YA+    GS+  SR VF+   
Sbjct: 57  VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 116

Query: 57  EPDSFMWAVLIKCYMWNNFFE-ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           E +   W  +I  Y  +   + E+I L+ KMI      ++F + SVL+AC +L D  +GE
Sbjct: 117 EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 176

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +V+   +K G    + +  S++  Y   G ++DARK FD +  +++VS+++I+  Y  N 
Sbjct: 177 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 236

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E   +F+ +   G+     T  SL      + ++     IHG +L+   K +  + N
Sbjct: 237 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 296

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + I MYS+CG++ +A + F ++E R   SWT+MI+ + + G+  +ALE F KMLE   +P
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 356

Query: 296 NLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           N IT + VL +C+ +G + EG K  +      G+ P         +E YA          
Sbjct: 357 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR--------MEHYA---------- 398

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                          ++    R G+  EA+E +  M    LM D+    + L AC   G+
Sbjct: 399 --------------CMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGN 441

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            +LG      +++ +  D      L ++++  G
Sbjct: 442 TELGRHAAEMILEQEPDDPAAYILLSNLHASAG 474


>gi|302818178|ref|XP_002990763.1| hypothetical protein SELMODRAFT_132289 [Selaginella moellendorffii]
 gi|300141501|gb|EFJ08212.1| hypothetical protein SELMODRAFT_132289 [Selaginella moellendorffii]
          Length = 661

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 190/610 (31%), Positives = 319/610 (52%), Gaps = 35/610 (5%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD---DVIQTSILCTYGEFGCLDDARKVFD 154
           Y  +L+AC+ L  L  G+++H  I+           ++   ++  YG+ G +++AR VF 
Sbjct: 17  YARLLQACARLKALSQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFA 76

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLR 213
            M   ++VSW++IIA++    D    L +F +M  E  V PD V+  S+A ACG   S R
Sbjct: 77  SMEHPNLVSWNTIIAAHAAAGDGRGALAVFRAMQLEASVVPDRVSFTSVANACG---SAR 133

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC--TTSWTAMISC 271
            AR IH  V  R    D  +  + I  Y +CG L  A  TF  +  R     +WTA+I+ 
Sbjct: 134 EARIIHASVAARGFLDDVIVCTALITAYCRCGSLGEARATFDAMAPRARNVVTWTALIAG 193

Query: 272 YNRSGWFQKALESFVKMLEVKE--------EPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           Y +SG  ++AL+ F  M E            PN +T++TV+  CA    L +GK++H + 
Sbjct: 194 YAQSGHLEEALDLFWSMAEHDGGGGETWSVAPNAVTIVTVVNLCAEFAALDQGKAIHDRC 253

Query: 324 IRKG-MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
           I    +  +   +G +L+  YA+CG + +   V  ++ ERN +SWN ++S Y++ G   +
Sbjct: 254 IHAAAIRDDPVQIGTSLVTMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYSQHGHGAQ 313

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD---------E 433
            L L   M   G+ P++ ++   ++AC ++  L+    IHG ++ +  +D          
Sbjct: 314 LLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLRQADDIHGRIV-LQSRDTPALSLRTNA 372

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
            V  +L  MY++CG  + A  +F  ++Q++VV WN+MI  + Q+G    A+ +F  M  +
Sbjct: 373 VVGCALCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRGRLALAVFGGMQQH 432

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
            ++ D +T ++ + AC+  G   +G  VH   +   +R    +D A  +MYAK G +  A
Sbjct: 433 GVKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQLRS-AALDNAAVNMYAKSGRVAAA 491

Query: 554 QRVFDSM--SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
           + VF++M    R ++SWSAM+  Y   G   +A  LF  M   G++PN VT ++IL ACS
Sbjct: 492 REVFEAMDSQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACS 551

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH---SMPFPANG 667
           H+G ++ G   F +M   +GV P  +H  C+VD+L R+G +E A +++    +     + 
Sbjct: 552 HAGMLQAGCSCFASMAADYGVWPREEHTGCVVDMLGRAGWVEQAHRLVQRSGAGGGGGDA 611

Query: 668 SIWGALLNGC 677
             W A+L  C
Sbjct: 612 QAWMAVLGAC 621



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 162/584 (27%), Positives = 290/584 (49%), Gaps = 31/584 (5%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPAS---TRLIESYAEMGSLRSSRLVFDTFK 56
           L ++C  L+ L+   R+HAH+L +       ++     LI  Y + G +  +R VF + +
Sbjct: 20  LLQACARLKALSQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFASME 79

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGE 115
            P+   W  +I  +        ++ ++  M  E + + + + + SV  AC S  +     
Sbjct: 80  HPNLVSWNTIIAAHAAAGDGRGALAVFRAMQLEASVVPDRVSFTSVANACGSARE---AR 136

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFD 173
            +H  +   GF  D ++ T+++  Y   G L +AR  FD M   +R+VV+W+++IA Y  
Sbjct: 137 IIHASVAARGFLDDVIVCTALITAYCRCGSLGEARATFDAMAPRARNVVTWTALIAGYAQ 196

Query: 174 NADVSEGLKMFHSMVRE--------GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
           +  + E L +F SM            V P+ VT++++   C E  +L   ++IH   +  
Sbjct: 197 SGHLEEALDLFWSMAEHDGGGGETWSVAPNAVTIVTVVNLCAEFAALDQGKAIHDRCIHA 256

Query: 226 KIKIDGP--LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
               D P  +G S + MY+KCG +  A   F  + +R   SW AM+S Y++ G   + L 
Sbjct: 257 AAIRDDPVQIGTSLVTMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYSQHGHGAQLLH 316

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG-PEYD-----YLGP 337
            F  ML+   +PN +TL+ V+ +C+ L  LR+   +H +I+ +    P         +G 
Sbjct: 317 LFRAMLQGGVQPNAVTLLPVVNACSSLAQLRQADDIHGRIVLQSRDTPALSLRTNAVVGC 376

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL   YA CG + E   V   + +RN++SWN +I  YA+ G  + AL +   MQ  G+ P
Sbjct: 377 ALCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRGRLALAVFGGMQQHGVKP 436

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           D+ ++ S L AC   G  + G Q+HG  +++  +   + ++ ++MY+K G    A  +FE
Sbjct: 437 DAITLISVLDACAGAGDARRGSQVHGWSLQLQLRSAALDNAAVNMYAKSGRVAAAREVFE 496

Query: 458 RI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
            +  Q+++++ W++M+  +   G++ EA  LFH M    +  + VT ++ + ACS+ G L
Sbjct: 497 AMDSQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACSHAGML 556

Query: 516 EKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           + G      + + YGV         + DM  + G ++ A R+  
Sbjct: 557 QAGCSCFASMAADYGVWPREEHTGCVVDMLGRAGWVEQAHRLVQ 600



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 249/502 (49%), Gaps = 39/502 (7%)

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG---NSFIVMYSKCG 245
           R GV  +  T   L +AC  L +L   + IH H+L              N  I MY KCG
Sbjct: 7   RSGVAAEASTYARLLQACARLKALSQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCG 66

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVL 304
            +  A   F  +E     SW  +I+ +  +G  + AL  F  M LE    P+ ++  +V 
Sbjct: 67  RVEEARAVFASMEHPNLVSWNTIIAAHAAAGDGRGALAVFRAMQLEASVVPDRVSFTSVA 126

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG--ER 362
            +C   G  RE + +H  +  +G   +   +  ALI  Y  CG + E      A+    R
Sbjct: 127 NAC---GSAREARIIHASVAARGFLDDV-IVCTALITAYCRCGSLGEARATFDAMAPRAR 182

Query: 363 NILSWNMLISEYARKGMSKEALELLVQM--------QTWGLMPDSFSVASSLSACGNVGS 414
           N+++W  LI+ YA+ G  +EAL+L   M        +TW + P++ ++ + ++ C    +
Sbjct: 183 NVVTWTALIAGYAQSGHLEEALDLFWSMAEHDGGGGETWSVAPNAVTIVTVVNLCAEFAA 242

Query: 415 LQLGLQIHGHVIKIDC-KDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           L  G  IH   I     +D+ VQ  +SL+ MY+KCG    A L+F+ + +++ V WN+M+
Sbjct: 243 LDQGKAIHDRCIHAAAIRDDPVQIGTSLVTMYAKCGSIEDARLVFDSMAERNEVSWNAML 302

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI----- 526
            G+ Q+G+  + ++LF  M    ++ + VT L  + ACS++ QL +   +H +++     
Sbjct: 303 SGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLRQADDIHGRIVLQSRD 362

Query: 527 --SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
             +  +R +  +  AL  MYA+CG +  A  VF  M +RNVVSW+AMI  Y  HG+   A
Sbjct: 363 TPALSLRTNAVVGCALCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRGRLA 422

Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD- 643
            ++F  M   G+KP+ +T +++L AC+ +G    G       ++ G    LQ  +  +D 
Sbjct: 423 LAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGS------QVHGWSLQLQLRSAALDN 476

Query: 644 ----LLSRSGDIEGAFKMIHSM 661
               + ++SG +  A ++  +M
Sbjct: 477 AAVNMYAKSGRVAAAREVFEAM 498



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 186/360 (51%), Gaps = 35/360 (9%)

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           M++C  RSG   +A  ++ ++L+               +CA L  L +G+ +H  I+   
Sbjct: 1   MVACVERSGVAAEA-STYARLLQ---------------ACARLKALSQGQRIHAHILSSH 44

Query: 328 MGPEY--DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
                    +   LI  Y +CG++ E   V  ++   N++SWN +I+ +A  G  + AL 
Sbjct: 45  SSSGSSSTLVLNHLINMYGKCGRVEEARAVFASMEHPNLVSWNTIIAAHAAAGDGRGALA 104

Query: 386 LLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMY 443
           +   MQ    ++PD  S  S  +ACG+    ++   IH  V      D+  V ++LI  Y
Sbjct: 105 VFRAMQLEASVVPDRVSFTSVANACGSAREARI---IHASVAARGFLDDVIVCTALITAY 161

Query: 444 SKCGFKNLAYLLFERI--QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN-------- 493
            +CG    A   F+ +  + ++VV W ++I G+ Q+G+  EA++LF  M  +        
Sbjct: 162 CRCGSLGEARATFDAMAPRARNVVTWTALIAGYAQSGHLEEALDLFWSMAEHDGGGGETW 221

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKD-IYIDTALTDMYAKCGDLQ 551
            +  + VT +T +  C+    L++GK +H + I +  +R D + I T+L  MYAKCG ++
Sbjct: 222 SVAPNAVTIVTVVNLCAEFAALDQGKAIHDRCIHAAAIRDDPVQIGTSLVTMYAKCGSIE 281

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+ VFDSM+ERN VSW+AM+  Y  HG       LF+ ML  G++PN VT + ++ ACS
Sbjct: 282 DARLVFDSMAERNEVSWNAMLSGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACS 341


>gi|347954486|gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
          Length = 734

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 202/706 (28%), Positives = 354/706 (50%), Gaps = 48/706 (6%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + + C   R L+   ++HA +L  G  Y  +    T+L+  YA+   L  S  +F   + 
Sbjct: 57  ILQGCVYDRDLSTGKQIHARVLKNGEFYSRNEYIETKLVVFYAKCDDLEISESLFSRLRI 116

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            + F WA ++       F E+++  + +M+  + +  NF+ P+V +AC  L     G  V
Sbjct: 117 RNVFSWAAIVGVRSRIGFSEDALTGFVEMLETEISPDNFVVPNVCKACGVLRWSRFGRSV 176

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K        + +S+   YG+ G LDDARKVFD++  R+VV+W++++  Y  N   
Sbjct: 177 HGFVMKSRLHDCVFVASSLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYVQNGMN 236

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            E +++   M  EG+EP  VT+     A   +  +   +  H   +   +++D  LG S 
Sbjct: 237 EEAIRLLSDMKEEGIEPTRVTVSMCLSASANIGGIEEGKQSHAVAIVNGLEMDNILGTSL 296

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPN 296
           +  Y K G +  AE  F ++  +   +W  +IS Y + G  + A++   +++ V+  + +
Sbjct: 297 LNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVENAID-MCRLMRVENLKFD 355

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            +TL T++   A    L+ GK V C  IR     +   L    ++ YAECG + + +KV 
Sbjct: 356 CVTLSTLMSVAARTRDLKLGKEVLCYCIRHSFESDIG-LASTAVDMYAECGSVVDAKKVF 414

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS---VASSLSACGNVG 413
            A  +++++ WN L++ Y   G S EAL L  +MQ   + P+  +   +  SL   G V 
Sbjct: 415 DATVQKDLILWNALLAAYTESGHSGEALRLFYEMQLQSVPPNVITRNLIMRSLLGNGQVS 474

Query: 414 SLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
                          + K+ F Q     M S   F NL             + W +M+ G
Sbjct: 475 ---------------EAKEMFSQ-----MQSSGIFPNL-------------ISWTTMMNG 501

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRK 532
             QNG S EAI    +M  +    + V+   A+ AC+N+  L  G  +H  +I +     
Sbjct: 502 LVQNGCSEEAILFLRKMLESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRNQQHSS 561

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDS--MSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
            + +DT+L DMYAKCGD+  A+RVF S   SE  +  + AMI  Y ++G+L +A +L++ 
Sbjct: 562 SVLVDTSLVDMYAKCGDINKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAVTLYRN 621

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           + + GI+P++ T  ++L AC ++G  ++    F  M    G++P L+HY+ MV+LL+ +G
Sbjct: 622 LEEIGIEPDDKTITSLLSACKNAGDTKQAIEIFAGMVSKHGMKPCLEHYSLMVELLASAG 681

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           ++E A +++  MP+  +  +  +LL+ C    + ++M+ I K L V
Sbjct: 682 EVEKALRLVEEMPYKPDARVIQSLLDSCNKQHKTELMEYISKHLVV 727



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 154/326 (47%), Gaps = 7/326 (2%)

Query: 357 HAIGERNILS---WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
           H    RN LS   +   +S  ++ G   EAL L+ +M    L          L  C    
Sbjct: 6   HDDQSRNPLSTTSYFHRVSSLSKNGEINEALRLVTEMDFRNLRIGPEIFGEILQGCVYDR 65

Query: 414 SLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
            L  G QIH  V+K      ++E++++ L+  Y+KC    ++  LF R++ ++V  W ++
Sbjct: 66  DLSTGKQIHARVLKNGEFYSRNEYIETKLVVFYAKCDDLEISESLFSRLRIRNVFSWAAI 125

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           +    + G S +A+  F +M    +  D        +AC  +     G+ VH  ++   +
Sbjct: 126 VGVRSRIGFSEDALTGFVEMLETEISPDNFVVPNVCKACGVLRWSRFGRSVHGFVMKSRL 185

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
              +++ ++L DMY K G L  A++VFD + ERNVV+W+AM+  Y  +G   +A  L   
Sbjct: 186 HDCVFVASSLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSD 245

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGD 650
           M + GI+P  VT    L A ++ G +EEGK       + G+E D      +++   + G 
Sbjct: 246 MKEEGIEPTRVTVSMCLSASANIGGIEEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGL 305

Query: 651 IEGAFKMIHSMPFPANGSIWGALLNG 676
           IE A +M+       +   W  L++G
Sbjct: 306 IEYA-EMVFDRMIGKDVVTWNLLISG 330


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 172/498 (34%), Positives = 291/498 (58%), Gaps = 7/498 (1%)

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A + F K+ +R   +WT MI+ + + G  + A++ F+ M      P+  T  +VL +C  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC---GKMSECEKVIHAIGERNILS 366
           LG L  GK +H ++IR G+  +   +G +L++ YA+C   G + +  KV   + E N++S
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDV-CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127

Query: 367 WNMLISEYARKG-MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           W  +I+ YA+ G   KEA+EL  +M +  + P+ FS +S L ACGN+     G Q++ + 
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 426 IKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           +K+       V +SLI MY++ G    A   F+ + +K++V +N+++ G+ +N  S EA 
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF+++    + +   TF + +   ++IG + KG+ +H +L+  G + +  I  AL  MY
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           ++CG+++ A +VF+ M +RNV+SW++MI  +  HG    A  +F +ML++G KPNE+T++
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367

Query: 605 NILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
            +L ACSH G + EG+ +FN+M +  G+ P ++HYACMVDLL RSG +  A + I+SMP 
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427

Query: 664 PANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
            A+  +W  LL  CR+H   ++ +   + +     +D   Y LLSN++A  G W +  K+
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487

Query: 724 RSIMEVTGLKKVPGYSTI 741
           R  M+   L K  G S I
Sbjct: 488 RKSMKERNLIKEAGCSWI 505



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 259/524 (49%), Gaps = 52/524 (9%)

Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
           A KVFDKM  R++V+W+ +I  +       + + +F  M   G  PD  T  S+  AC E
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC---GDLLSAERTFVKIEKRCTTSW 265
           L  L   + +H  V+R  + +D  +G S + MY+KC   G +  + + F ++ +    SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 266 TAMISCYNRSGWFQK-ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           TA+I+ Y +SG   K A+E F KM+     PN  +  +VL +C  L     G+ V+   +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
           + G+    + +G +LI  YA  G+M +  K    + E+N++S+N ++  YA+   S+EA 
Sbjct: 189 KLGIA-SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMY 443
            L  ++   G+   +F+ AS LS   ++G++  G QIHG ++K   K ++ + ++LI MY
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           S+CG    A+ +F  ++ ++V+ W SMI GF ++G +  A+ +FH+M     + +E+T++
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM-SE 562
             + ACS++G + +G                                   Q+ F+SM  E
Sbjct: 368 AVLSACSHVGMISEG-----------------------------------QKHFNSMYKE 392

Query: 563 RNVVS----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
             +V     ++ M+D  G  G L +A      M    +  + + +  +L AC   G+ E 
Sbjct: 393 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHGNTEL 449

Query: 619 GKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           G+    A  I   EP D   Y  + +L + +G  +   K+  SM
Sbjct: 450 GR--HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 491



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 246/520 (47%), Gaps = 38/520 (7%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VFD   E +   W ++I  +       ++I L+  M         F Y SVL AC+ LG 
Sbjct: 12  VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF---GCLDDARKVFDKMTSRDVVSWSSI 167
           L  G+++H R+I+ G   D  +  S++  Y +    G +DD+RKVF++M   +V+SW++I
Sbjct: 72  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131

Query: 168 IASYFDNADV-SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
           I +Y  + +   E +++F  M+   + P+  +  S+ +ACG L        ++ + ++  
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
           I     +GNS I MY++ G +  A + F  + ++   S+ A++  Y ++   ++A   F 
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
           ++ +     +  T  ++L   A +G + +G+ +H ++++ G       +  ALI  Y+ C
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN-QCICNALISMYSRC 310

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G +    +V + + +RN++SW  +I+ +A+ G +  ALE+  +M   G  P+  +  + L
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
           SAC +VG +  G                 Q     MY + G       +  R++      
Sbjct: 371 SACSHVGMISEG-----------------QKHFNSMYKEHG-------IVPRMEH----- 401

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           +  M+    ++G  +EA+   + M L     D + + T + AC   G  E G+    ++I
Sbjct: 402 YACMVDLLGRSGLLVEAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGRHA-AEMI 457

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
                 D      L++++A  G  +   ++  SM ERN++
Sbjct: 458 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 497



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 216/453 (47%), Gaps = 43/453 (9%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEM---GSLRSSRLVFDTFK 56
           +  +CT L  L    +LH+ ++  GL  D      L++ YA+    GS+  SR VF+   
Sbjct: 62  VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 121

Query: 57  EPDSFMWAVLIKCYMWNNFFE-ESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           E +   W  +I  Y  +   + E+I L+ KMI      ++F + SVL+AC +L D  +GE
Sbjct: 122 EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 181

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +V+   +K G    + +  S++  Y   G ++DARK FD +  +++VS+++I+  Y  N 
Sbjct: 182 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 241

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
              E   +F+ +   G+     T  SL      + ++     IHG +L+   K +  + N
Sbjct: 242 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 301

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + I MYS+CG++ +A + F ++E R   SWT+MI+ + + G+  +ALE F KMLE   +P
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 361

Query: 296 NLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           N IT + VL +C+ +G + EG K  +      G+ P         +E YA          
Sbjct: 362 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR--------MEHYA---------- 403

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
                          ++    R G+  EA+E +  M    LM D+    + L AC   G+
Sbjct: 404 --------------CMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGN 446

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
            +LG      +++ +  D      L ++++  G
Sbjct: 447 TELGRHAAEMILEQEPDDPAAYILLSNLHASAG 479


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 180/496 (36%), Positives = 280/496 (56%), Gaps = 12/496 (2%)

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           ++K    SW ++I+   RSG   +AL +F  M ++   P   +    + +C+ L  +  G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K  H Q    G   +  ++  ALI  Y+ CGK+ +  KV   I +R+I+SW  +I  Y  
Sbjct: 96  KQTHQQAFVFGYQSDI-FVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDL 154

Query: 377 KGMSKEALELLVQM------QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
            G + +A+ L   +          +  DS  + S +SAC  V +  L   IH  VIK   
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 431 -KDEFVQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
            +   V ++L+D Y+K G   +A    +F++I  K  V +NS++  + Q+G S EA  +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274

Query: 488 HQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
            ++  N  +  + +T  T + A S+ G L  GK +H ++I  G+  D+ + T++ DMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG ++TA++ FD M  +NV SW+AMI  YGMHG    A  LF  M+DSG++PN +TF+++
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 607 LWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSH+G   EG  +FNAM+  FGVEP L+HY CMVDLL R+G ++ A+ +I  M    
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
           +  IW +LL  CRIHK +++ +     L    +++ GYY LLS+IYA+ G W +  +VR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514

Query: 726 IMEVTGLKKVPGYSTI 741
           IM+  GL K PG+S +
Sbjct: 515 IMKNRGLVKPPGFSLL 530



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 225/441 (51%), Gaps = 27/441 (6%)

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
           + D F W  +I     +    E++L +  M +     +   +P  ++ACSSL D+ SG++
Sbjct: 38  KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
            H +    G+  D  + ++++  Y   G L+DARKVFD++  RD+VSW+S+I  Y  N +
Sbjct: 98  THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGN 157

Query: 177 VSEGLKMFHSMVREGVEPDFVTML------SLAEACGELCSLRPARSIHGHVLRRKIKID 230
             + + +F  ++ +  + D    L      S+  AC  + +     SIH  V++R     
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217

Query: 231 GPLGNSFIVMYSKCGD--LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
             +GN+ +  Y+K G+  +  A + F +I  +   S+ +++S Y +SG   +A E F ++
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277

Query: 289 LEVKEEP-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAEC 346
           ++ K    N ITL TVL + +  G LR GK +H Q+IR  MG E D + G ++I+ Y +C
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR--MGLEDDVIVGTSIIDMYCKC 335

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
           G++    K    +  +N+ SW  +I+ Y   G + +ALEL   M   G+ P+  +  S L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSL------IDMYSKCGFKNLAYLLFERI 459
           +AC +      GL + G       K  F V+  L      +D+  + GF   AY L +R+
Sbjct: 396 AACSHA-----GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 460 QQK-SVVMWNSMI--CGFYQN 477
           + K   ++W+S++  C  ++N
Sbjct: 451 KMKPDSIIWSSLLAACRIHKN 471



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 96/169 (56%), Gaps = 6/169 (3%)

Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
           +NL  L    + +  V  WNS+I    ++G+S EA+  F  M    L     +F  AI+A
Sbjct: 26  QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           CS++  +  GK  H +   +G + DI++ +AL  MY+ CG L+ A++VFD + +R++VSW
Sbjct: 86  CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSW 145

Query: 569 SAMIDCYGMHGQLNDAASLFKQML------DSGIKPNEVTFMNILWACS 611
           ++MI  Y ++G   DA SLFK +L      D  +  + +  ++++ ACS
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 108/194 (55%), Gaps = 3/194 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAE--MGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           +H+ ++  G          L+++YA+   G +  +R +FD   + D   +  ++  Y  +
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 74  NFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
               E+  ++ ++++ +    N I   +VL A S  G L  G+ +H ++I+ G + D ++
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
            TSI+  Y + G ++ ARK FD+M +++V SW+++IA Y  +   ++ L++F +M+  GV
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 193 EPDFVTMLSLAEAC 206
            P+++T +S+  AC
Sbjct: 385 RPNYITFVSVLAAC 398



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 10/161 (6%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H  ++  GL  D    T +I+ Y + G + ++R  FD  K  +   W  +I  Y  +  
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG----EKVHGRI-IKCGFDKDD 130
             +++ L+  MI      +   + SVL ACS  G    G      + GR  ++ G +   
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH-- 426

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
                ++   G  G L  A  +  +M  + D + WSS++A+
Sbjct: 427 --YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 192/629 (30%), Positives = 327/629 (51%), Gaps = 6/629 (0%)

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +K G   D     +IL  Y +   L  A  +FD+M  RD VSW+++IA + +  ++
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
                +   M   G E D  T  S+ +           + +H  +++     +   G++ 
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY+KC  L  A  +F+ I K  T SW AMI+ Y ++G  + A      M +  E+ + 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T   +L       +      +H +II+ G+    + +  ALI  Y++CG + + +++  
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGL-ELVNTMCNALITSYSKCGSLDDAKRIFD 259

Query: 358 A-IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           +  G R++++WN L++ Y  +     A +LL+ MQ  G  PD +S  S +SAC N     
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL--AYLLFERIQQKSVVMWNSMICG 473
            G  +HG VIK   +    + ++LI MY K  + ++  A  +FE ++ K  V WNS++ G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             Q G+S +A+  F  M    +++D  +F   +++CS++   + G+ +H   + YG+  +
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESN 439

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            ++ ++L  MY+KCG ++ A+R F+  S+ + ++W+A++  Y  HGQ N A  LF  M +
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEE 499

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIE 652
             +K + +TF+ +L ACSH G VE+G  +   M   +GV P ++HYAC VDL  RSG +E
Sbjct: 500 KKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLE 559

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A  +I  MPF  + ++W   L  CR    I++   +   L      ++  Y LLSN+Y 
Sbjct: 560 EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYG 619

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               WDE  KV+ +M+  G+KKVPG+S I
Sbjct: 620 NLMRWDEKAKVKRLMKERGVKKVPGWSWI 648



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 296/611 (48%), Gaps = 18/611 (2%)

Query: 2   PLFRSCTNLRKLTRL---HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           PL    T+ R L  L   H+  +  G   D      ++  Y +   LRS+ ++FD     
Sbjct: 3   PLSAVGTSFRALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMR 62

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           DS  W  +I  ++     E S  +   M      +  + + S+L+  +  G    G++VH
Sbjct: 63  DSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVH 122

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             IIK G+ ++    +++L  Y +   L+DA   F  ++  + VSW+++I  Y    D  
Sbjct: 123 SIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRE 182

Query: 179 EGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
               +   M +EG + D   +  +L L +   + C+L     +HG +++  +++   + N
Sbjct: 183 TAFWLLDCMEQEGEKVDDGTYAPLLPLLDD-ADFCNL--TSQLHGKIIKHGLELVNTMCN 239

Query: 236 SFIVMYSKCGDLLSAERTF-VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           + I  YSKCG L  A+R F      R   +W ++++ Y        A +  + M E   E
Sbjct: 240 ALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFE 299

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY--AECGKMSEC 352
           P+L +  +++ +C        G+S+H  +I++G       +  ALI  Y  ++ G M E 
Sbjct: 300 PDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVP-ISNALISMYLKSDYGSMKEA 358

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             +  ++  ++ +SWN +++  ++ G S++A++  + M++  +  D +S ++ L +C ++
Sbjct: 359 LCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDL 418

Query: 413 GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
            + QLG QIH   +K   + +EFV SSLI MYSKCG    A   FE   + S + WN+++
Sbjct: 419 ATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALM 478

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGV 530
            G+ Q+G    A++LF  M    ++MD +TF+  + ACS+IG +E+G K++      YGV
Sbjct: 479 FGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGV 538

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFK 589
              +       D+Y + G L+ A+ + + M  + +   W   +      G +  A  +  
Sbjct: 539 PPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAG 598

Query: 590 QMLDSGIKPNE 600
            +L+  ++P E
Sbjct: 599 HLLE--MEPEE 607



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 206/446 (46%), Gaps = 37/446 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PD 59
           +PL          ++LH  ++  GL         LI SY++ GSL  ++ +FD+     D
Sbjct: 207 LPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRD 266

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  L+  Y+  +  + +  L   M         + Y S++ AC +     +G  +HG
Sbjct: 267 LVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHG 326

Query: 120 RIIKCGFDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
            +IK GF++   I  +++  Y   ++G + +A  +F+ +  +D VSW+SI+         
Sbjct: 327 LVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSS 386

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + +K F  M    ++ D  +  ++  +C +L + +  + IH   L+  ++ +  + +S 
Sbjct: 387 EDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSL 446

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKCG +  A R+F +  K  + +W A++  Y + G    AL+ F  M E K + + 
Sbjct: 447 IFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDH 506

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           IT + VL +C+ +G + +G    C+ +R     E DY  P  +E YA C           
Sbjct: 507 ITFVAVLTACSHIGLVEQG----CKFLR---CMESDYGVPPRMEHYA-CA---------- 548

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                        +  Y R G  +EA  L+ +M      PD+    + L AC + G+++L
Sbjct: 549 -------------VDLYGRSGRLEEAKALIEEMP---FKPDTTVWKTFLGACRSCGNIEL 592

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMY 443
             Q+ GH+++++ ++      L +MY
Sbjct: 593 ACQVAGHLLEMEPEEHCTYVLLSNMY 618


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 175/517 (33%), Positives = 283/517 (54%), Gaps = 45/517 (8%)

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W  M+     S      LE +V+M+     PN  T   +L SCA      EG+ +H Q++
Sbjct: 51  WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110

Query: 325 RKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHA------------------------- 358
           +  +G E D Y   +LI  YA  G++ +  KV                            
Sbjct: 111 K--LGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSA 168

Query: 359 ------IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
                 I ER+++SWN +I+ Y      +EALEL  +M    + PD  ++ S LSAC   
Sbjct: 169 RKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQS 228

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-----VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
           GS++LG +IH     +D    F     + ++ I +YSKCG   +A  LFE +  K VV W
Sbjct: 229 GSIELGREIH---TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSW 285

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
           N++I G+       EA+ LF +M  +    ++VT L+ + AC+++G ++ G+W+H  +  
Sbjct: 286 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK 345

Query: 528 Y--GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAA 585
              GV     + T+L DMYAKCGD++ A +VF+SM  +++ SW+AMI  + MHG+ N A 
Sbjct: 346 RLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAF 405

Query: 586 SLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDL 644
            LF +M  +GI+P+++T + +L ACSHSG ++ G+  F ++ + + + P L+HY CM+DL
Sbjct: 406 DLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDL 465

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
           L  +G  + A ++IH MP   +G IW +LL  C++H  +++ ++  ++L      ++G Y
Sbjct: 466 LGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSY 525

Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            LLSNIYA  G W++  ++R ++   G+KKVPG S+I
Sbjct: 526 VLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSI 562



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 263/563 (46%), Gaps = 56/563 (9%)

Query: 17  HAHLLVTGLHYDPPASTRLIE---SYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           HA ++ TGLH    A ++L+E          L  +  VF+T +EP+  +W  +++    +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
           +     + +Y +M+      + + +P +L++C+       G ++H +++K G + D    
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 134 TSILCTYGEFGCLDDA-------------------------------RKVFDKMTSRDVV 162
           TS++  Y   G L+DA                               RKVFD +T RDVV
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 163 SWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG-- 220
           SW+++I  Y +N    E L++F  M+R  V PD  T++S+  AC +  S+   R IH   
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 221 ---HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
              H     +KI     N+FI +YSKCGD+  A   F  +  +   SW  +I  Y     
Sbjct: 242 DDHHGFGSSLKI----VNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNL 297

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG-PEYDYLG 336
           +++AL  F +ML   E PN +T+++VL +CA LG +  G+ +H  I ++  G      L 
Sbjct: 298 YKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALR 357

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +LI+ YA+CG +    +V +++  +++ SWN +I  +A  G +  A +L  +M+  G+ 
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIE 417

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSL------IDMYSKCG-FK 449
           PD  ++   LSAC + G L LG     H+ K   +D  +   L      ID+    G FK
Sbjct: 418 PDDITLVGLLSACSHSGLLDLGR----HIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFK 473

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
               ++     +   V+W S++     +GN LE    F Q  +     +  +++      
Sbjct: 474 EAEEIIHMMPMEPDGVIWCSLLKACKMHGN-LELAESFAQKLMEIEPENSGSYVLLSNIY 532

Query: 510 SNIGQLEKGKWVHHKLISYGVRK 532
           +  G+ E    +   L   G++K
Sbjct: 533 ATAGRWEDVARIREVLNGKGMKK 555



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 35/263 (13%)

Query: 448 FKNLAYLL--FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           F  L Y +  FE  Q+ ++++WN+M+ G   + + +  + ++ +M       +  TF   
Sbjct: 30  FDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFL 89

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK------------------- 546
           +++C+     E+G+ +H +++  G   D Y  T+L  MYA+                   
Sbjct: 90  LKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDV 149

Query: 547 --C----------GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS 594
             C          GD+++A++VFD ++ER+VVSW+AMI  Y  +    +A  LFK+M+ +
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209

Query: 595 GIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEG 653
            ++P+E T +++L AC+ SGS+E G+     +    G    L+     + L S+ GD+E 
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEI 269

Query: 654 AFKMIHSMPFPANGSIWGALLNG 676
           A  +   +      S W  L+ G
Sbjct: 270 ASGLFEGLSCKDVVS-WNTLIGG 291



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKC------GDLQTAQRVFDSMSERNVVSWSAMIDC 574
            H +++  G+    Y   AL+ +   C        L  A  VF++  E N++ W+ M+  
Sbjct: 1   THAQMVKTGLHNTNY---ALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRG 57

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
                 L     ++ +M+  G  PN  TF  +L +C+ S + EEG+     +   G E D
Sbjct: 58  LASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELD 117

Query: 635 LQHYACMVDLLSRSGDIEGAFKM 657
              +  ++ + +R+G +E A K+
Sbjct: 118 RYAHTSLISMYARNGRLEDARKV 140


>gi|6735376|emb|CAB68197.1| putative protein [Arabidopsis thaliana]
          Length = 810

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 206/686 (30%), Positives = 337/686 (49%), Gaps = 59/686 (8%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY--------MWNNFFEESILLYHKM 86
           +I  Y ++G +  +  VFD   E +   +  +IK Y         W  F E   + Y   
Sbjct: 124 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE---MRYFGY 180

Query: 87  IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGC 145
           +  Q+T+S  +      +C+SL D+ +G ++HG  +K G F  D  + T +LC YG    
Sbjct: 181 LPNQSTVSGLL------SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 233

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L+ A +VF+ M  + + +W+ +++       + E +  F  +VR G      + L + + 
Sbjct: 234 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 293

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
              +  L  ++ +H    ++ +  +  + NS I  Y KCG+   AER F         SW
Sbjct: 294 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 353

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            A+I    +S    KAL+ FV M E    PN  T ++VLG  + +  L  G+ +H  +I+
Sbjct: 354 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 413

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G       LG ALI+FYA+CG + +       I ++NI+ WN L+S YA K      L 
Sbjct: 414 NGCETGI-VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLS 471

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYS 444
           L +QM   G  P  ++ +++L +C  V  LQ   Q+H  ++++  +D ++V SSL+  Y+
Sbjct: 472 LFLQMLQMGFRPTEYTFSTALKSCC-VTELQ---QLHSVIVRMGYEDNDYVLSSLMRSYA 527

Query: 445 KCGFKNLAYLLFE--------------------------------RIQQKSVVMWNSMIC 472
           K    N A LL +                                 ++Q   V WN  I 
Sbjct: 528 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 587

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR- 531
              ++    E I LF  M  + +  D+ TF++ +  CS +  L  G  +H  +       
Sbjct: 588 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC 647

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            D ++   L DMY KCG +++  +VF+   E+N+++W+A+I C G+HG   +A   FK+ 
Sbjct: 648 ADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKET 707

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           L  G KP+ V+F++IL AC H G V+EG   F  M+ +GVEP++ HY C VDLL+R+G +
Sbjct: 708 LSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYL 767

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGC 677
           + A  +I  MPFPA+  +W   L+GC
Sbjct: 768 KEAEHLIREMPFPADAPVWRTFLDGC 793



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 277/607 (45%), Gaps = 46/607 (7%)

Query: 6   SCTNL--RKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC +L  R  T+LH   L  GL   D    T L+  Y  +  L  +  VF+         
Sbjct: 192 SCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET 251

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++       F +E +  + +++R  A+++   +  VL+  S + DL   +++H    
Sbjct: 252 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSAT 311

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G D +  +  S++  YG+ G    A ++F    S D+VSW++II +   + +  + LK
Sbjct: 312 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALK 371

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F SM   G  P+  T +S+      +  L   R IHG +++   +    LGN+ I  Y+
Sbjct: 372 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA 431

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCY-NRSGWFQKALESFVKMLEVKEEPNLITLI 301
           KCG+L  +   F  I  +    W A++S Y N+ G     L  F++ML++   P   T  
Sbjct: 432 KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFS 489

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC--------------- 346
           T L SC     + E + +H  I+R G   + DY+  +L+  YA+                
Sbjct: 490 TALKSCC----VTELQQLHSVIVRMGY-EDNDYVLSSLMRSYAKNQLMNDALLLLDWASG 544

Query: 347 -----------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
                            G+  E  K+I  + + + +SWN+ I+  +R    +E +EL   
Sbjct: 545 PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKH 604

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCG 447
           M    + PD ++  S LS C  +  L LG  IHG + K D  C D FV + LIDMY KCG
Sbjct: 605 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 664

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
                  +FE  ++K+++ W ++I     +G   EA+  F +      + D V+F++ + 
Sbjct: 665 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 724

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           AC + G +++G  +  K+  YGV  ++       D+ A+ G L+ A+ +   M    +  
Sbjct: 725 ACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAP 784

Query: 567 SWSAMID 573
            W   +D
Sbjct: 785 VWRTFLD 791



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 274/622 (44%), Gaps = 54/622 (8%)

Query: 100 SVLRACSSLGDLGSGEKVHG-RIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMT 157
           S+L  C         + +H   I  C      V +  +I+  Y + G +  A KVFD+M 
Sbjct: 86  SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 145

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+ VS+++II  Y    DV +   +F  M   G  P+  T+  L  +C  L  +R    
Sbjct: 146 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQ 203

Query: 218 IHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           +HG  L+  + + D  +G   + +Y +   L  AE+ F  +  +   +W  M+S     G
Sbjct: 204 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 263

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + ++ +  F +++ +       + + VL   + +  L   K +HC   +KG+  E   + 
Sbjct: 264 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 323

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +LI  Y +CG     E++    G  +I+SWN +I   A+     +AL+L V M   G  
Sbjct: 324 -SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 382

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLL 455
           P+  +  S L     V  L  G QIHG +IK  C+   V  ++LID Y+KCG    + L 
Sbjct: 383 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 442

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ I+ K++V WN+++ G Y N +    ++LF QM        E TF TA+++C  + +L
Sbjct: 443 FDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VTEL 500

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKC---------------------------- 547
           ++   +H  ++  G   + Y+ ++L   YAK                             
Sbjct: 501 QQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 557

Query: 548 ----GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
               G    + ++  ++ + + VSW+  I          +   LFK ML S I+P++ TF
Sbjct: 558 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 617

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDL---QHYAC--MVDLLSRSGDIEGAFKMI 658
           ++IL  CS    +  G    +++     + D      + C  ++D+  + G I    K+ 
Sbjct: 618 VSILSLCSKLCDLTLG----SSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVF 673

Query: 659 HSMPFPANGSIWGALLNGCRIH 680
                  N   W AL++   IH
Sbjct: 674 EETR-EKNLITWTALISCLGIH 694


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 183/585 (31%), Positives = 307/585 (52%), Gaps = 45/585 (7%)

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+   + +L  A  +   +  AR +   + +R +       N+ +  YSK   L   ER 
Sbjct: 42  PEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYS----WNTLLSSYSKLACLPEMERV 97

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGW 312
           F  +  R   SW ++IS Y   G+  ++++++  ML       N I L T+L   +  G 
Sbjct: 98  FHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGC 157

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE--------------------------- 345
           +  G  VH  +++ G    Y ++G  L++ Y++                           
Sbjct: 158 VHLGLQVHGHVVKFGF-QSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIA 216

Query: 346 ----CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
               C ++ +  ++ + + E++ +SW  +I+ + + G+ +EA++L  +M+   L  D ++
Sbjct: 217 GLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYT 276

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ 460
             S L+ACG V +LQ G Q+H ++I+ D +D  FV S+L+DMY KC     A  +F ++ 
Sbjct: 277 FGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMN 336

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            K+VV W +M+ G+ QNG S EA+ +F  M  N +E D+ T  + I +C+N+  LE+G  
Sbjct: 337 CKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQ 396

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
            H + +  G+   I +  AL  +Y KCG ++ + R+F  MS  + VSW+A++  Y   G+
Sbjct: 397 FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGK 456

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM----RIFGVEPDLQ 636
            N+   LF+ ML  G KP++VTF+ +L ACS +G V++G   F +M    RI  +E    
Sbjct: 457 ANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIE---D 513

Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
           HY CM+DL SR+G +E A K I+ MPF  +   W +LL+ CR H+ +++ K   + L   
Sbjct: 514 HYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKL 573

Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
             ++   Y LLS+IYA +G W+E   +R  M   GL+K PG S I
Sbjct: 574 EPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWI 618



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 218/435 (50%), Gaps = 68/435 (15%)

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPE-------------YDYLGPA--------------- 338
           C  L   R+ K +HC II+    PE             +D +  A               
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 339 --LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM---SKEALELLVQMQTW 393
             L+  Y++   + E E+V HA+  R+++SWN LIS YA +G    S +A  L++    +
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLA 452
            L  +  ++++ L      G + LGLQ+HGHV+K   +   FV S L+DMYSK G    A
Sbjct: 139 NL--NRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCA 196

Query: 453 YLLFERIQQKSVVM-------------------------------WNSMICGFYQNGNSL 481
              F+ + +K+VVM                               W +MI GF QNG   
Sbjct: 197 RQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           EAI+LF +M L  LEMD+ TF + + AC  +  L++GK VH  +I    + +I++ +AL 
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV 316

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           DMY KC  +++A+ VF  M+ +NVVSW+AM+  YG +G   +A  +F  M ++GI+P++ 
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDF 376

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           T  +++ +C++  S+EEG  +     + G+   +     +V L  + G IE + ++   M
Sbjct: 377 TLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM 436

Query: 662 PFPANGSIWGALLNG 676
            +    S W AL++G
Sbjct: 437 SYVDEVS-WTALVSG 450



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 260/549 (47%), Gaps = 79/549 (14%)

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
           C  L      +K+H  IIK   + +  +  +++  Y +F  +  AR+VFD+M  R++ SW
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 165 SSIIASYFDNADVSEGLKMFHSM-VREGVEPD---------------------------- 195
           +++++SY   A + E  ++FH+M  R+ V  +                            
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 196 ------FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
                   TML LA   G    +     +HGHV++   +    +G+  + MYSK G +  
Sbjct: 139 NLNRIALSTMLILASKQG---CVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFC 195

Query: 250 AERTFVKIEK--------------RC-----------------TTSWTAMISCYNRSGWF 278
           A + F ++ +              RC                 + SWTAMI+ + ++G  
Sbjct: 196 ARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLD 255

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
           ++A++ F +M     E +  T  +VL +C G+  L+EGK VH  IIR        ++G A
Sbjct: 256 REAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI-FVGSA 314

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L++ Y +C  +   E V   +  +N++SW  ++  Y + G S+EA+++   MQ  G+ PD
Sbjct: 315 LVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPD 374

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAYLLF 456
            F++ S +S+C N+ SL+ G Q H   + +     F  V ++L+ +Y KCG    ++ LF
Sbjct: 375 DFTLGSVISSCANLASLEEGAQFHCRAL-VSGLISFITVSNALVTLYGKCGSIEDSHRLF 433

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
             +     V W +++ G+ Q G + E + LF  M  +  + D+VTF+  + ACS  G ++
Sbjct: 434 SEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQ 493

Query: 517 KGKWVHHKLISYGVRKDIYID---TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMI 572
           KG  +   +I     + I I+   T + D++++ G L+ A++  + M    + + W++++
Sbjct: 494 KGNQIFESMIKE--HRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLL 551

Query: 573 DCYGMHGQL 581
                H  +
Sbjct: 552 SSCRFHRNM 560



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 226/482 (46%), Gaps = 42/482 (8%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA-TI 93
           L+ SY+++  L     VF      D   W  LI  Y    F  +S+  Y+ M+      +
Sbjct: 81  LLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNL 140

Query: 94  SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC-------- 145
           +     ++L   S  G +  G +VHG ++K GF     + + ++  Y + G         
Sbjct: 141 NRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAF 200

Query: 146 -----------------------LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
                                  ++D+R++F  M  +D +SW+++IA +  N    E + 
Sbjct: 201 DEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAID 260

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M  E +E D  T  S+  ACG + +L+  + +H +++R   + +  +G++ + MY 
Sbjct: 261 LFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYC 320

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KC  + SAE  F K+  +   SWTAM+  Y ++G+ ++A++ F  M     EP+  TL +
Sbjct: 321 KCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGS 380

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           V+ SCA L  L EG   HC+ +  G+   +  +  AL+  Y +CG + +  ++   +   
Sbjct: 381 VISSCANLASLEEGAQFHCRALVSGL-ISFITVSNALVTLYGKCGSIEDSHRLFSEMSYV 439

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           + +SW  L+S YA+ G + E L L   M   G  PD  +    LSAC   G +Q G QI 
Sbjct: 440 DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIF 499

Query: 423 GHVIK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFY 475
             +IK    I  +D +  + +ID++S+ G    A     ++      + W S++  C F+
Sbjct: 500 ESMIKEHRIIPIEDHY--TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557

Query: 476 QN 477
           +N
Sbjct: 558 RN 559



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 175/360 (48%), Gaps = 14/360 (3%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           LI        +  SR +F   +E DS  W  +I  +  N    E+I L+ +M  E   + 
Sbjct: 214 LIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMD 273

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            + + SVL AC  +  L  G++VH  II+  +  +  + ++++  Y +   +  A  VF 
Sbjct: 274 QYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFR 333

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           KM  ++VVSW++++  Y  N    E +K+F  M   G+EPD  T+ S+  +C  L SL  
Sbjct: 334 KMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE 393

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
               H   L   +     + N+ + +Y KCG +  + R F ++      SWTA++S Y +
Sbjct: 394 GAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQ 453

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG-MGPEYD 333
            G   + L  F  ML    +P+ +T I VL +C+  G +++G  +   +I++  + P  D
Sbjct: 454 FGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIED 513

Query: 334 YLGPALIEFYAECGKMSECEKVIH-------AIGERNILS-----WNMLISEYARKGMSK 381
           +    +I+ ++  G++ E  K I+       AIG  ++LS      NM I ++A + + K
Sbjct: 514 HY-TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLK 572



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 155/326 (47%), Gaps = 18/326 (5%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L++  ++HA+++ T    +    + L++ Y +  S++S+  VF      +   W  ++  
Sbjct: 290 LQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVG 349

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           Y  N + EE++ ++  M        +F   SV+ +C++L  L  G + H R +  G    
Sbjct: 350 YGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF 409

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             +  +++  YG+ G ++D+ ++F +M+  D VSW+++++ Y      +E L++F SM+ 
Sbjct: 410 ITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLA 469

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM---YSKCGD 246
            G +PD VT + +  AC     ++    I   +++    I  P+ + +  M   +S+ G 
Sbjct: 470 HGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRII--PIEDHYTCMIDLFSRAGR 527

Query: 247 LLSAERTFVKIE-KRCTTSWTAMISC--YNRSGWFQK-ALESFVKMLEVKEEPNLITLIT 302
           L  A +   K+        W +++S   ++R+    K A ES +K+     EP+      
Sbjct: 528 LEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKL-----EPHNTASYI 582

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGM 328
           +L S     +  +GK      +RKGM
Sbjct: 583 LLSSI----YAAKGKWEEVANLRKGM 604



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 13/174 (7%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC NL  L    + H   LV+GL      S  L+  Y + GS+  S  +F      D   
Sbjct: 384 SCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVS 443

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  L+  Y       E++ L+  M+          +  VL ACS  G +  G ++   +I
Sbjct: 444 WTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMI 503

Query: 123 KCGFDKDDVIQ-----TSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIAS 170
           K    +  +I      T ++  +   G L++ARK  +KM  S D + W+S+++S
Sbjct: 504 K----EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSS 553


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 179/567 (31%), Positives = 293/567 (51%), Gaps = 19/567 (3%)

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           DV E +    +M+ EG        + L   C E  SL  AR++HGH+ +     D  +  
Sbjct: 62  DVQEAM----TMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVAT 117

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           S +  Y +C     A R F  + +R   +WTA+++ Y  +      LE FV+MLE+   P
Sbjct: 118 SLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           +  TL   L +C     +  GK VH   I+ G       +G +L   YA+ G +    + 
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIKYG-AESITSMGNSLCSLYAKLGSLDSALRA 236

Query: 356 IHAIGERNILSWNMLISEYARKGMSKE-ALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
              I E+N+++W  +IS  A      E  + L + M   G+MP+ F++ S +S CG    
Sbjct: 237 FWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLD 296

Query: 415 LQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L LG Q+     KI C+    V++S + +Y + G  + A  LFE+++  S++ WN+MI G
Sbjct: 297 LNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISG 356

Query: 474 FYQNGNS-----------LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
           + Q  +S            +A+ +F  +  + ++ D  TF + +  CS +  LE+G+ +H
Sbjct: 357 YAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIH 416

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
            + I  G   D+ +++AL +MY KCG +Q A + F  M  R  V+W++MI  Y  HGQ  
Sbjct: 417 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACM 641
           +A  LF++M  +G++PNE+TF+++L ACS++G VEE + YF+ M+  + +EP + HY CM
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCM 536

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           +D+  R G +E AF  I    F  N +IW +L+ GCR H  +++      +L        
Sbjct: 537 IDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGI 596

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIME 728
             Y LL N+Y     W +  +VR +M+
Sbjct: 597 ETYILLLNMYISTERWQDVARVRKLMK 623



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 268/562 (47%), Gaps = 51/562 (9%)

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M+ E   + + +Y  +L  C   G LG+   VHG + K G   D  + TS++  Y     
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
             DAR++FD M  R+VV+W++++  Y  N+  + GL++F  M+  G  P   T+ +   A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           C   C +   + +HG+ ++   +    +GNS   +Y+K G L SA R F +I ++   +W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 266 TAMIS-CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           T MIS C       +  +  F+ ML     PN  TL +V+  C     L  GK V  Q  
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV--QAF 306

Query: 325 RKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR------- 376
              +G E +  +  + +  Y   G+  E  ++   + + +I++WN +IS YA+       
Sbjct: 307 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD 366

Query: 377 ----KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CK 431
               +    +AL +   ++   + PD F+ +S LS C  + +L+ G QIH   IK     
Sbjct: 367 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 426

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D  V S+L++MY+KCG    A   F  +  ++ V W SMI G+ Q+G   EAI LF +M 
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
           L  +  +E+TF++ + ACS  G +E+ +  H+    + + K  Y    + D Y       
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAE--HY----FDMMKKEYCIEPVVDHYG------ 534

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
                              MID +   G++ DA S  K+   +G +PNE  + +++  C 
Sbjct: 535 ------------------CMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAGCR 573

Query: 612 HSGSVEEGKFYFNAMRIFGVEP 633
             G++E    ++ A ++  ++P
Sbjct: 574 SHGNMELA--FYAADKLLELKP 593



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/580 (24%), Positives = 263/580 (45%), Gaps = 38/580 (6%)

Query: 1   MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           +PL   C    +L     +H H+  TG   D   +T L+ +Y    + R +R +FD   E
Sbjct: 82  VPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPE 141

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W  L+  Y  N+     + ++ +M+      S++   + L AC +  D+  G++V
Sbjct: 142 RNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQV 201

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG  IK G +    +  S+   Y + G LD A + F ++  ++V++W+++I++  ++ + 
Sbjct: 202 HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEEC 261

Query: 178 SE-GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            E G+ +F  M+ +GV P+  T+ S+   CG    L   + +     +   + + P+ NS
Sbjct: 262 VELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNS 321

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY------------NRSGWFQKALES 284
            + +Y + G+   A R F ++E     +W AMIS Y             RS  FQ AL  
Sbjct: 322 TMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ-ALTI 380

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F  +     +P+L T  ++L  C+ +  L +G+ +H Q I+ G   +   +  AL+  Y 
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV-VVNSALVNMYN 439

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG + +  K    +  R  ++W  +IS Y++ G  +EA++L  +M+  G+ P+  +  S
Sbjct: 440 KCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVS 499

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-Q 461
            LSAC   G ++        + K  C +  V     +IDM+ + G    A+   +R   +
Sbjct: 500 LLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFE 559

Query: 462 KSVVMWNSMICGFYQNGN-----------------SLEAINLFHQMYLNCLEMDEVTFLT 504
            +  +W+S++ G   +GN                  +E   L   MY++     +V  + 
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVR 619

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            +    ++G L    W+  K   Y  R +       T++Y
Sbjct: 620 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELY 659


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 170/497 (34%), Positives = 286/497 (57%), Gaps = 14/497 (2%)

Query: 257  IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
            ++K    SW ++I+   R G   +AL +F  + ++   P   +    + SC+ L  L  G
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 1161

Query: 317  KSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
            +  H Q    G   E D ++  ALI+ Y++CG++ +   +   I  RN++SW  +I+ Y 
Sbjct: 1162 RMSHQQAFVFGF--ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYV 1219

Query: 376  RKGMSKEALELL-------VQMQTWGLMP-DSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
            +   +  AL L         +++    +P DS  + S LSAC  V    +   +HG V+K
Sbjct: 1220 QNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVK 1279

Query: 428  IDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                    V ++L+D Y+KCG   ++  +F+ +++K  + WNSMI  + Q+G S EA+ +
Sbjct: 1280 KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEV 1339

Query: 487  FHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
            FH M  +  +  + VT    + AC++ G L  GK +H ++I   +  ++ + T++ DMY 
Sbjct: 1340 FHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 1399

Query: 546  KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
            KCG ++ A++ FD M E+NV SW+AM+  YGMHG+  +A  +F +M+ +G+KPN +TF++
Sbjct: 1400 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 1459

Query: 606  ILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
            +L ACSH+G VEEG  +FNAM+  + +EP ++HY CMVDL  R+G +  A+ +I  M   
Sbjct: 1460 VLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMK 1519

Query: 665  ANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
             +  +WG+LL  CRIHK +D+ +   ++L     ++ GYY LLSN+YA+ G W +  ++R
Sbjct: 1520 PDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMR 1579

Query: 725  SIMEVTGLKKVPGYSTI 741
             +M+   L K PG+S +
Sbjct: 1580 MLMKNRQLVKPPGFSLV 1596



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 203/387 (52%), Gaps = 37/387 (9%)

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +C     LR+   +H +IIR G+  +   L   LI  Y+  G+++    + + I   
Sbjct: 33  LLQNCKNFKHLRQ---IHAKIIRSGLSND-QLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
              +WN++I      G+S++AL L   M   G+  D F+    + AC N  S+ LG  +H
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148

Query: 423 GHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFER----------------------- 458
           G +IK     D FVQ++LID Y KCG    A  +FE+                       
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208

Query: 459 --------IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
                   I  K+VV W +MI G+ +N    EA+ LF +M    +  +E T ++ I+AC+
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G L  G+ +H   I   +   +Y+ TAL DMY+KCG ++ A  VF++M  +++ +W++
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI   G+HG   +A +LF +M    +KP+ +TF+ +L AC H  +V+EG  YF  M + +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFK 656
           G+ P  +HY CM +L +RS +++ AFK
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 265/507 (52%), Gaps = 50/507 (9%)

Query: 160  DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
            +V SW+S+IA      D  E L+ F S+ + G+ P   +     ++C  LC L   R  H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 220  GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
                    + D  + ++ I MYSKCG L  A   F +I  R   SWT+MI+ Y ++    
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225

Query: 280  KALESFVKMLEVKEE-------P-NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
             AL  F   LE + E       P + + +++VL +C+ +      + VH  +++KG    
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285

Query: 332  YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM- 390
               +G  L++ YA+CG+    +KV   + E++ +SWN +I+ YA+ G+S EALE+   M 
Sbjct: 1286 IG-VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344

Query: 391  QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
            +  G+  ++ ++++ L AC + G+L+ G  IH  VIK+D + +  V +S+IDMY KCG  
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404

Query: 450  NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             +A   F+R+++K+V  W +M+ G+  +G + EA+++F++M    ++ + +TF++ + AC
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464

Query: 510  SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            S+ G +E+G W  H   +   + DI                           E  +  + 
Sbjct: 1465 SHAGLVEEG-W--HWFNAMKHKYDI---------------------------EPGIEHYG 1494

Query: 570  AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF 629
             M+D +G  G LN+A +L K+M    +KP+ V + ++L AC    +V+ G+    A ++F
Sbjct: 1495 CMVDLFGRAGCLNEAYNLIKRM---KMKPDFVVWGSLLGACRIHKNVDLGE--IAAQKLF 1549

Query: 630  GVEPD-LQHYACMVDLLSRSG---DIE 652
             ++PD   +Y  + +L + +G   D+E
Sbjct: 1550 ELDPDNCGYYVLLSNLYADAGRWADVE 1576



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 219/415 (52%), Gaps = 21/415 (5%)

Query: 98   YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
            +P  +++CS+L DL SG   H +    GF+ D  + ++++  Y + G L DAR +FD++ 
Sbjct: 1145 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 1204

Query: 158  SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE-------P-DFVTMLSLAEACGEL 209
             R+VVSW+S+I  Y  N      L +F   + E  E       P D V M+S+  AC  +
Sbjct: 1205 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 1264

Query: 210  CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
                    +HG V+++       +GN+ +  Y+KCG  L +++ F  +E++   SW +MI
Sbjct: 1265 SGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMI 1324

Query: 270  SCYNRSGWFQKALESFVKMLE-VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
            + Y +SG   +ALE F  M+  V    N +TL  VL +CA  G LR GK +H Q+I+  M
Sbjct: 1325 AVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK--M 1382

Query: 329  GPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
              EY+  +G ++I+ Y +CG++   +K    + E+N+ SW  +++ Y   G +KEAL++ 
Sbjct: 1383 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIF 1442

Query: 388  VQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYS 444
             +M   G+ P+  +  S L+AC + G ++ G        H   I+   E     ++D++ 
Sbjct: 1443 YKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY-GCMVDLFG 1501

Query: 445  KCGFKNLAYLLFERIQQKS-VVMWNSMI--CGFYQNGN--SLEAINLFHQMYLNC 494
            + G  N AY L +R++ K   V+W S++  C  ++N +   + A  LF     NC
Sbjct: 1502 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNC 1556



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 33/390 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L ++C N + L ++HA ++ +GL  D   + +LI  Y+  G +  + L+F   + P +F 
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W ++I+    N   E++++LY  M+ +      F +P V++AC++   +  G+ VHG +I
Sbjct: 93  WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152

Query: 123 KCGFDKDDVIQTSIL-----CTYGEF--------------------------GCLDDARK 151
           K GF  D  +Q +++     C +  F                          G L +AR+
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +FD++ S++VVSW+++I  Y  N    E L++F  M  E + P+  TM+SL +AC E+  
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   R IH + ++  I+I   LG + I MYSKCG +  A   F  + ++   +W +MI+ 
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGP 330
               G  Q+AL  F +M  V  +P+ IT I VL +C  +  ++EG +   ++ +  G+ P
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             ++    + E YA    + E  K    +G
Sbjct: 393 IPEHY-ECMTELYARSNNLDEAFKSTKEVG 421



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 176/324 (54%), Gaps = 12/324 (3%)

Query: 5    RSCTNLRKLT--RL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
            +SC+ L  L   R+ H    V G   D   S+ LI+ Y++ G L+ +R +FD     +  
Sbjct: 1150 KSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVV 1209

Query: 62   MWAVLIKCYMWNNFFEESILLYHKMIREQATISN--------FIYPSVLRACSSLGDLGS 113
             W  +I  Y+ N   + ++LL+   + E+  + +         +  SVL ACS +   G 
Sbjct: 1210 SWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGI 1269

Query: 114  GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
             E VHG ++K GFD    +  +++  Y + G    ++KVFD M  +D +SW+S+IA Y  
Sbjct: 1270 TEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQ 1329

Query: 174  NADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
            +    E L++FH MVR  GV  + VT+ ++  AC    +LR  + IH  V++  ++ +  
Sbjct: 1330 SGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVC 1389

Query: 233  LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
            +G S I MY KCG +  A++TF +++++   SWTAM++ Y   G  ++AL+ F KM+   
Sbjct: 1390 VGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG 1449

Query: 293  EEPNLITLITVLGSCAGLGWLREG 316
             +PN IT ++VL +C+  G + EG
Sbjct: 1450 VKPNYITFVSVLAACSHAGLVEEG 1473



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 177/372 (47%), Gaps = 36/372 (9%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R IH  ++R  +  D  L    I +YS  G +  A   F +I+  CT +W  +I     +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  ++AL  +  M+      +  T   V+ +C     +  GK VH  +I+ G   +  ++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDV-FV 162

Query: 336 GPALIEFYAECG-------------------------------KMSECEKVIHAIGERNI 364
              LI+FY +CG                                + E  ++   I  +N+
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SW  +I+ Y R    +EALEL  +MQ   + P+ +++ S + AC  +G L LG  IH +
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 425 VIKIDCKD--EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            IK +C +   ++ ++LIDMYSKCG    A  +FE + +KS+  WNSMI     +G   E
Sbjct: 283 AIK-NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQE 341

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALT 541
           A+NLF +M    ++ D +TF+  + AC +I  +++G     ++   YG+         +T
Sbjct: 342 ALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMT 401

Query: 542 DMYAKCGDLQTA 553
           ++YA+  +L  A
Sbjct: 402 ELYARSNNLDEA 413



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 8/170 (4%)

Query: 450  NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            NLA   ++ + + +V  WNS+I    + G+S+EA+  F  +    L     +F   I++C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152

Query: 510  SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            S +  L  G+  H +   +G   D+++ +AL DMY+KCG L+ A+ +FD +  RNVVSW+
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212

Query: 570  AMIDCYGMHGQLNDAASLFKQMLD--------SGIKPNEVTFMNILWACS 611
            +MI  Y  + Q ++A  LFK  L+        + +  + V  +++L ACS
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 1262



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 4/171 (2%)

Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
           +Q C N   L +   +H K+I  G+  D  +   L  +Y+  G +  A  +F  +     
Sbjct: 34  LQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
            +W+ +I    ++G    A  L+K M+  GI  ++ TF  ++ AC++  S++ GK    +
Sbjct: 91  FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150

Query: 626 MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +  +G   D+     ++D   + G    A K+   M    N   W  +++G
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV-RNVVSWTTVISG 200


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 183/558 (32%), Positives = 306/558 (54%), Gaps = 14/558 (2%)

Query: 111 LGSGEKVHGRIIK----CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
           L  G+ +H +IIK    C +     I  S++  Y +   L +A+ VF+++ ++DVVSW+ 
Sbjct: 22  LQKGKALHAQIIKSSSSCVY-----IANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNC 76

Query: 167 IIASYFDN--ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
           II  Y  +  +  S  +++F  M  E   P+  T   +  A   L      R  H   ++
Sbjct: 77  IINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIK 136

Query: 225 RKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
                D  +G+S + MY K G    A + F  + +R + SW  MIS Y       +AL  
Sbjct: 137 MDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGL 196

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F  M   +E  N     +VL +      +  GK +HC  ++ G+      +G AL+  YA
Sbjct: 197 FRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGL-LSIVSVGNALVTMYA 255

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG + +  +      ++N ++W+ +I+  A+ G S +AL+L   M   G+ P  F+   
Sbjct: 256 KCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVG 315

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            ++AC ++G+   G Q+H +++K+  + + +V ++L+DMY+KC     A   F+ +Q+  
Sbjct: 316 VINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPD 375

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           +V+W SMI G+ QNG + +A++L+ +M +  +  +E+T  + ++ACS++  LE+GK +H 
Sbjct: 376 IVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHA 435

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
           + + YG   ++ I +AL+ MYAKCG L+    VF  M  R+V+SW+AMI     +G   +
Sbjct: 436 RTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKE 495

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMV 642
           A  LF++M   G KP+ VTF+NIL ACSH G VE G  YF  M   FG++P ++HYACMV
Sbjct: 496 ALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMV 555

Query: 643 DLLSRSGDIEGAFKMIHS 660
           D+LSR+G ++ A +   S
Sbjct: 556 DILSRAGKLKEAIEFTES 573



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 182/633 (28%), Positives = 305/633 (48%), Gaps = 41/633 (6%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L+K   LHA ++ +       A++ L+  YA+   LR ++ VF+  +  D   W  +I 
Sbjct: 21  SLQKGKALHAQIIKSSSSCVYIANS-LVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79

Query: 69  CYMWNNFFEES--ILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
            Y  +     S  + L+ +M  E    +   +  V  A S+L D   G   H   IK   
Sbjct: 80  GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
            +D  + +S++  Y + G   +ARKVFD M  R+ VSW+++I+ Y      +E L +F  
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M RE    +     S+  A      +   + IH   ++  +     +GN+ + MY+KCG 
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L  A +TF     + + +W+AMI+   +SG   KAL+ F  M      P+  T + V+ +
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C+ LG   EGK VH  +++ G   +  Y+  AL++ YA+C  + +  K    + E +I+ 
Sbjct: 320 CSDLGAAWEGKQVHDYLLKLGFESQI-YVMTALVDMYAKCSSIVDARKGFDYLQEPDIVL 378

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  +I  Y + G +++AL L  +M+  G++P+  ++AS L AC ++ +L+ G QIH   +
Sbjct: 379 WTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438

Query: 427 KIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
           K     E  + S+L  MY+KCG      L+F R+  + V+ WN+MI G  QNG   EA+ 
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALE 498

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI--SYGVRKDIYIDTALTDM 543
           LF +M L   + D VTF+  + ACS++G +E+G W + +++   +G+   +     + D+
Sbjct: 499 LFEEMQLEGTKPDYVTFVNILSACSHMGLVERG-WGYFRMMFDEFGMDPRVEHYACMVDI 557

Query: 544 YAKCGDLQTA-----------------QRVFDSMSERNV-----VSW-------SAMIDC 574
            ++ G L+ A                 +RV   M  R V      SW          +  
Sbjct: 558 LSRAGKLKEAIEFTESATIDHGMWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVK 617

Query: 575 YGMHGQLNDA----ASLFKQMLDSGIKPNEVTF 603
             MH Q+ D       L KQM D G +P   +F
Sbjct: 618 DQMHPQIGDIHVELRQLSKQMKDEGYEPATDSF 650



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/475 (30%), Positives = 238/475 (50%), Gaps = 11/475 (2%)

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           SL+  +++H  +++        + NS + +Y+KC  L  A+  F +I+ +   SW  +I+
Sbjct: 21  SLQKGKALHAQIIKSSSSCV-YIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79

Query: 271 CYNRSG--WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
            Y++ G       +E F +M      PN  T   V  + + L     G+  H   I+  M
Sbjct: 80  GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIK--M 137

Query: 329 GPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
               D ++G +L+  Y + G   E  KV   + ERN +SW  +IS YA + ++ EAL L 
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKC 446
             M+      + F   S LSA      +  G QIH   +K        V ++L+ MY+KC
Sbjct: 198 RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  + A   FE    K+ + W++MI G  Q+G+S +A+ LF  M+L+ +   E TF+  I
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
            ACS++G   +GK VH  L+  G    IY+ TAL DMYAKC  +  A++ FD + E ++V
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIV 377

Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
            W++MI  Y  +G+  DA SL+ +M   GI PNE+T  ++L ACS   ++E+GK      
Sbjct: 378 LWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHART 437

Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP----FPANGSIWGALLNGC 677
             +G   ++   + +  + ++ G ++    +   MP       N  I G   NGC
Sbjct: 438 VKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGC 492



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 3/283 (1%)

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLL 455
           +P + S  ++L    +  SLQ G  +H  +IK      ++ +SL+++Y+KC     A  +
Sbjct: 3   LPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 456 FERIQQKSVVMWNSMICGFYQNG--NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           FERIQ K VV WN +I G+ Q+G   S   + LF +M       +  TF     A S + 
Sbjct: 63  FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
               G+  H   I     +D+++ ++L +MY K G    A++VFD+M ERN VSW+ MI 
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMIS 182

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            Y       +A  LF+ M       NE  F ++L A +    V  GK         G+  
Sbjct: 183 GYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLS 242

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            +     +V + ++ G ++ A +   +     N   W A++ G
Sbjct: 243 IVSVGNALVTMYAKCGSLDDALQTFETSS-DKNSITWSAMITG 284



 Score = 45.4 bits (106), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C++L  L    ++HA  +  G   + P  + L   YA+ G L+   LVF      D
Sbjct: 417 VLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
              W  +I     N   +E++ L+ +M  E        + ++L ACS +G
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 195/658 (29%), Positives = 334/658 (50%), Gaps = 19/658 (2%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD--DARKVFDK 155
           Y   LR+C+SL    +   VHG I +        ++ ++L  Y   G  D   AR++ D+
Sbjct: 16  YLHHLRSCASLPQAAA---VHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDE 72

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           M  R+ VS++ +I +Y       E L+ F H+     V+ D  T  +   AC     L+ 
Sbjct: 73  MPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKE 132

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
            + +H   +   +     + NS + MY++CGD+  A R F   E+R   SW +++S Y R
Sbjct: 133 GKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLR 192

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG-LGWLRE-GKSVHCQIIRKGMGPEY 332
            G  ++ L  F  M       N   L +V+  C+G  G +R   ++VH  +++ G+  + 
Sbjct: 193 VGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL 252

Query: 333 DYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR------KGMSKEALEL 386
            +L  A+++ YA+ G +SE   +  ++ + N++ +N +I+   R      K + +EAL L
Sbjct: 253 -FLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSL 311

Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYS 444
             ++Q+ G+ P  F+ +S + AC   G ++ G QIHG V+K  C   D+F+ S+LID+Y 
Sbjct: 312 YSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLK-HCFQGDDFIGSALIDLYF 370

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
                   +  F  + ++ VV W +MI G  QN     A+ LFH++    L+ D  T  +
Sbjct: 371 NSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISS 430

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            + AC+++  +  G+ +       G  +   +  +   MYA+ G+++ A + F  M   +
Sbjct: 431 VMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHD 490

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
           VVSWSA+I  +  HG    A   F +M+ + + PNE+TF+ +L ACSH G V+EG  Y+ 
Sbjct: 491 VVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYE 550

Query: 625 AMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
            M++ +G+ P ++H  C+VDLL R+G +  A   I    F     +W +LL  CRIH+ +
Sbjct: 551 IMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDM 610

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           +  + +   +       +G Y  L N+Y + G      K+R +M+  G+KK PG S I
Sbjct: 611 ERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWI 668



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 150/592 (25%), Positives = 284/592 (47%), Gaps = 21/592 (3%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTR--LIESYAEMGS--LRSSRLVFDTFKEPD 59
            RSC +L +   +H H  +   H  P    R  L+ +Y  +G+     +R + D     +
Sbjct: 20  LRSCASLPQAAAVHGH--IARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRN 77

Query: 60  SFMWAVLIKCYMWNNFFEESILLY-HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +  + +LI  Y      EES+  + H     +     F Y + L ACS  G L  G+ VH
Sbjct: 78  AVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVH 137

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +  G  +   +  S++  Y   G + +AR+VFD    RD VSW+S+++ Y       
Sbjct: 138 ALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHE 197

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRP-ARSIHGHVLRRKIKIDGPLGNS 236
           E L++F  M R  +  +   + S+ + C G   S+R  A ++HG V++  +  D  L ++
Sbjct: 198 EMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASA 257

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS--CYNRSG----WFQKALESFVKMLE 290
            + MY+K G L  A   F  +       + AMI+  C + +       ++AL  + ++  
Sbjct: 258 MVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQS 317

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              EP   T  +V+ +C   G +  GK +H Q+++     + D++G ALI+ Y     M 
Sbjct: 318 RGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGD-DFIGSALIDLYFNSACME 376

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +  +   ++ ++++++W  +IS   +  + + AL L  ++   GL PD F+++S ++AC 
Sbjct: 377 DGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACA 436

Query: 411 NVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
           ++  ++ G Q+     K    D F    +S I MY++ G    A   F+ ++   VV W+
Sbjct: 437 SLAVVRTGEQMQCFATK-SGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWS 495

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLIS 527
           ++I    Q+G + +A+  F++M    +  +E+TFL  + ACS+ G +++G ++     + 
Sbjct: 496 AIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKME 555

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQR-VFDSMSERNVVSWSAMIDCYGMH 578
           YG+   +   T + D+  + G L  A+  + DS+     V W +++    +H
Sbjct: 556 YGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIH 607



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 152/358 (42%), Gaps = 40/358 (11%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +L      D    + LI+ Y     +      F +  + D   W  +I   + N 
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNE 404

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            FE ++ L+H+++        F   SV+ AC+SL  + +GE++     K GFD+   +  
Sbjct: 405 LFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGN 464

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S +  Y   G ++ A + F +M S DVVSWS+II+S+  +    + L+ F+ MV   V P
Sbjct: 465 SCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVP 524

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + +T L +  AC            HG ++   ++                 +++  E   
Sbjct: 525 NEITFLGVLTACS-----------HGGLVDEGLRYY---------------EIMKMEYGL 558

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
               K C    T ++    R+G    A E+F++     +EP  +   ++LGSC     + 
Sbjct: 559 CPTVKHC----TCVVDLLGRAGRLADA-EAFIRDSIFHDEP--VVWQSLLGSCRIHRDME 611

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI-----LSW 367
            G+ V  +I+   + P        L   Y + G++S   K+   + ER +     LSW
Sbjct: 612 RGQLVADRIME--LQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSW 667


>gi|302814700|ref|XP_002989033.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
 gi|300143134|gb|EFJ09827.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
          Length = 806

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 188/711 (26%), Positives = 356/711 (50%), Gaps = 9/711 (1%)

Query: 23  TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
            GL  D      L+  Y    S+  +  VFD+ +E  S  W V++  +     F+ S+++
Sbjct: 88  AGLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQERTSVSWNVMLSAHARQGNFQMSLIV 147

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           +  M  +        + +VL +C+++G L +G+ VH  I +   + D  +  +++  YG+
Sbjct: 148 FRLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVHSNIQEQIGELDPQVGDAVVNMYGK 207

Query: 143 FGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
            G +++A +VFD+    R VVSW+S+IA++F N  + E  + F +M  EG  P+F T ++
Sbjct: 208 CGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLLEEAFRCFRTMQLEGFHPNFATFVN 267

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L   C +L +L    +++G V   +   +  +  + + MYS CG+ L A    ++     
Sbjct: 268 LLHGCTDLEALAEGDAVYGMVAETEFHSEPGIEIALVNMYSSCGE-LDAAYQILQGRDDV 326

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
           +  W++ +    R G+  + L    ++      PN   L++ L +C   G+LR G  +H 
Sbjct: 327 SLPWSSFLRATARYGYSNETLAVLRRIQLNGIFPNTTALVSGLSACVAPGFLRSGTGIHE 386

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            ++  G+   +  +  AL   Y +C  +     +   + +R+ ++WN ++S Y+  G  +
Sbjct: 387 LVLEAGI-QHHLVVATALFVMYGKCKSLDHARLLFDGMVQRDSVAWNAIMSLYSSYGRHE 445

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLI 440
             +EL   M   G+  +  S    LS+      L +G  +H   I+ +  +D+ V  +L+
Sbjct: 446 GVIELFRSMLQEGVRFNRASFCIVLSSLVYPAMLLIGESVHSMAIQKNYDEDDVVAGALV 505

Query: 441 DMYSKCGFKNLAYLLFERIQQK--SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
            MY++ G    A  +F+R+  K  S  +W +MI    ++    + + L+HQM L     D
Sbjct: 506 TMYARLGKLEKAREIFDRVSAKEPSTALWTAMISACVEHREHHQGLALYHQMLLEGYRPD 565

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           +V+ L A+  CS++  L+ G+ +H +++  G+  D  + +AL DMY KCG L+ ++ VF 
Sbjct: 566 KVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKCGGLEASRAVFQ 625

Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
              +++ V W++++      G   D   LF  M   G++ +  +F+++L ACSH+G  ++
Sbjct: 626 RSEKQDPVLWNSLLAVEARCG--GDTMRLFHWMQQDGLRSDGASFVSLLAACSHAGVEDK 683

Query: 619 GKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
              YF AM+  FGV P  +H+ CMVDLL+R+G +E A ++I       +  +W  LL  C
Sbjct: 684 AWDYFAAMKWDFGVVPASEHFGCMVDLLARTGKLEAAEELIFKSRLRLDSRLWITLLAAC 743

Query: 678 RIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
             +  +  ++       V    ++G Y  L N++A  G   +   +R+ ++
Sbjct: 744 NANGDVSRVERAGMNALVLDPQNSGLYVTLGNMFAAAGREQDARNMRAALD 794



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 173/643 (26%), Positives = 314/643 (48%), Gaps = 20/643 (3%)

Query: 43  GSLRSSRLVFDTFKEPDSFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSV 101
           G L  +R +F  F  P + + W  +I     +  F E+I L+H+   E   +    + +V
Sbjct: 6   GRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKTSFLAV 65

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           + AC+  G+L +G      + + G + D V+  +++  YG    +D+A  VFD +  R  
Sbjct: 66  VNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQERTS 125

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           VSW+ +++++    +    L +F  M  +G +P+ +T L++ E+C  + SL   + +H +
Sbjct: 126 VSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVHSN 185

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF-VKIEKRCTTSWTAMISCYNRSGWFQK 280
           +  +  ++D  +G++ + MY KCG +  A R F  +  +R   SW +MI+ +  +   ++
Sbjct: 186 IQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLLEE 245

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-----L 335
           A   F  M      PN  T + +L  C  L  L EG +V+      GM  E ++     +
Sbjct: 246 AFRCFRTMQLEGFHPNFATFVNLLHGCTDLEALAEGDAVY------GMVAETEFHSEPGI 299

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNI-LSWNMLISEYARKGMSKEALELLVQMQTWG 394
             AL+  Y+ CG++    +++   G  ++ L W+  +   AR G S E L +L ++Q  G
Sbjct: 300 EIALVNMYSSCGELDAAYQILQ--GRDDVSLPWSSFLRATARYGYSNETLAVLRRIQLNG 357

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAY 453
           + P++ ++ S LSAC   G L+ G  IH  V++   +    V ++L  MY KC   + A 
Sbjct: 358 IFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHAR 417

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           LLF+ + Q+  V WN+++  +   G     I LF  M    +  +  +F   + +     
Sbjct: 418 LLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYPA 477

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS--ERNVVSWSAM 571
            L  G+ VH   I     +D  +  AL  MYA+ G L+ A+ +FD +S  E +   W+AM
Sbjct: 478 MLLIGESVHSMAIQKNYDEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTAM 537

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           I     H + +   +L+ QML  G +P++V+ +  L  CS   S++ G+     +   G+
Sbjct: 538 ISACVEHREHHQGLALYHQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGL 597

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           EPD    + +VD+  + G +E A + +       +  +W +LL
Sbjct: 598 EPDEVVASALVDMYGKCGGLE-ASRAVFQRSEKQDPVLWNSLL 639



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 179/361 (49%), Gaps = 28/361 (7%)

Query: 10  LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           LR  T +H  +L  G+ +    +T L   Y +  SL  +RL+FD   + DS  W  ++  
Sbjct: 378 LRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHARLLFDGMVQRDSVAWNAIMSL 437

Query: 70  YMWNNFFEESILLYHKMIREQA---------TISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           Y      E  I L+  M++E            +S+ +YP++L           GE VH  
Sbjct: 438 YSSYGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYPAMLLI---------GESVHSM 488

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS--WSSIIASYFDNADVS 178
            I+  +D+DDV+  +++  Y   G L+ AR++FD++++++  +  W+++I++  ++ +  
Sbjct: 489 AIQKNYDEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTAMISACVEHREHH 548

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           +GL ++H M+ EG  PD V++L+    C  L SL+  R IH  V+   ++ D  + ++ +
Sbjct: 549 QGLALYHQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALV 608

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY KCG L ++   F + EK+    W ++++   R G     +  F  M +     +  
Sbjct: 609 DMYGKCGGLEASRAVFQRSEKQDPVLWNSLLAVEARCG--GDTMRLFHWMQQDGLRSDGA 666

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRK---GMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + +++L +C+  G   E K+       K   G+ P  ++ G  +++  A  GK+   E++
Sbjct: 667 SFVSLLAACSHAGV--EDKAWDYFAAMKWDFGVVPASEHFG-CMVDLLARTGKLEAAEEL 723

Query: 356 I 356
           I
Sbjct: 724 I 724



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 1/217 (0%)

Query: 442 MYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           MY  CG    A  +F      S VV W  +I    ++G+  EAI+LFH+  L  + +D+ 
Sbjct: 1   MYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKT 60

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           +FL  + AC++ G L  G+     +   G+  D+ +   L +MY  C  +  A  VFDS+
Sbjct: 61  SFLAVVNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSI 120

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            ER  VSW+ M+  +   G    +  +F+ M   G KP  +TF+ +L +C+  GS+E GK
Sbjct: 121 QERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGK 180

Query: 621 FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
              + ++    E D Q    +V++  + G +E A ++
Sbjct: 181 LVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARV 217


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 189/598 (31%), Positives = 315/598 (52%), Gaps = 39/598 (6%)

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
           ++  K+   +++    P+     +L  A  +L ++  AR    HV  +  + +    N+ 
Sbjct: 22  TQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYAR----HVFDKMPQPNSFSWNTM 77

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPN 296
           +  YSK GDL + +  F  +  R   SW ++IS Y   G   +A++++  M++      N
Sbjct: 78  LSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLN 137

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
            IT  T+L   +  G +  G+ +H QI++ G G  Y ++G +L++ YA+ G +S   +V 
Sbjct: 138 RITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGA-YVFVGSSLVDMYAKMGLVSVASQVF 196

Query: 357 HAIGERNILSWNMLISEYARKGMSK-------------------------------EALE 385
             + ERN++ +N +I+   R GM K                               EA++
Sbjct: 197 DEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMD 256

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYS 444
           L   M+  G+  D ++  S L+ACG + +L+ G +IH  +I+     + FV S+L+DMY 
Sbjct: 257 LFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYC 316

Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
           KC     A  +F+R+  K+VV W +M+ G+ QNG S EA+ +F  M  N +E D+ T  +
Sbjct: 317 KCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGS 376

Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
            I +C+N+  LE+G   H + +  G+   I +  AL  +Y KCG ++ + ++FD MS R+
Sbjct: 377 VISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRD 436

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
            VSW+A++  Y   G+ N+   LF++ML  G+KP+ VTF+ +L ACS +G VE G+ YF 
Sbjct: 437 EVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFE 496

Query: 625 AM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRI 683
           +M +  G+ P   HY CM+DL  R+G +E A   I+ MPF  +   W  LL+ CR++   
Sbjct: 497 SMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNE 556

Query: 684 DVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++ K   + L      +   Y LLS+IYA +G W    ++R  M   G +K PG+S I
Sbjct: 557 EIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWI 614



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 261/552 (47%), Gaps = 83/552 (15%)

Query: 103 RACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK------- 155
           + C    +    +K+H  IIK   + +  +  +++  Y + G +  AR VFDK       
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 156 ------------------------MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
                                   M +RD VSW+S+I+ Y     V E +K ++SM+++G
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132

Query: 192 V----EPDFVTMLSL--AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
           V       F TML L  ++ C +L      R IHG +++        +G+S + MY+K G
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDL-----GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMG 187

Query: 246 DLLSAERTFVKIEKRC-------------------------------TTSWTAMISCYNR 274
            +  A + F ++++R                                + SWT MI+   +
Sbjct: 188 LVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQ 247

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +G   +A++ F  M +     +  T  +VL +C GL  L+EGK +H  IIR G      +
Sbjct: 248 NGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNV-F 306

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +G AL++ Y +C  +   E V   +  +N++SW  ++  Y + G S+EA+ +   MQ  G
Sbjct: 307 VGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG 366

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLA 452
           + PD F++ S +S+C N+ SL+ G Q H   + +     F  V ++LI +Y KCG    +
Sbjct: 367 IEPDDFTLGSVISSCANLASLEEGAQFHCQAL-VSGLISFITVSNALITLYGKCGSIEDS 425

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             LF+ +  +  V W +++ G+ Q G + E I+LF +M +  L+ D VTF+  + ACS  
Sbjct: 426 NQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRA 485

Query: 513 GQLEKG-KWVHHKLISYGV--RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSW 568
           G +E+G ++    L  +G+    D Y  T + D++ + G L+ A+   + M    + + W
Sbjct: 486 GLVERGQQYFESMLKDHGIIPFSDHY--TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGW 543

Query: 569 SAMIDCYGMHGQ 580
           + ++    ++G 
Sbjct: 544 ATLLSSCRLYGN 555



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/623 (24%), Positives = 276/623 (44%), Gaps = 107/623 (17%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           N  +  +LH  ++ +  + +      LI +Y+++G++  +R VFD   +P+SF W  ++ 
Sbjct: 20  NQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLS 79

Query: 69  CYM----------------------WNNFFE---------ESILLYHKMIREQA-TISNF 96
            Y                       WN+            E++  Y+ M+++    ++  
Sbjct: 80  AYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRI 139

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK- 155
            + ++L   SS G +  G ++HG+I+K GF     + +S++  Y + G +  A +VFD+ 
Sbjct: 140 TFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEV 199

Query: 156 ------------------------------MTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
                                         M  RD +SW+++I     N   +E + +F 
Sbjct: 200 QERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFR 259

Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
            M +EG+  D  T  S+  ACG L +L+  + IH  ++R     +  +G++ + MY KC 
Sbjct: 260 DMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCR 319

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
            +  AE  F ++  +   SWTAM+  Y ++G+ ++A+  F  M     EP+  TL +V+ 
Sbjct: 320 SVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVIS 379

Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
           SCA L  L EG   HCQ +  G+   +  +  ALI  Y +CG + +  ++   +  R+ +
Sbjct: 380 SCANLASLEEGAQFHCQALVSGL-ISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEV 438

Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
           SW  L+S YA+ G + E ++L  +M   GL PD+ +  + LSAC   G ++ G Q    +
Sbjct: 439 SWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESM 498

Query: 426 IK----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           +K    I   D +  + +ID++ + G          R++                     
Sbjct: 499 LKDHGIIPFSDHY--TCMIDLFGRAG----------RLE--------------------- 525

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI-YIDTAL 540
           EA N  ++M  +    D + + T + +C   G  E GKW    L+    +    YI   L
Sbjct: 526 EAKNFINKMPFSP---DSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYI--LL 580

Query: 541 TDMYAKCGDLQTAQRVFDSMSER 563
           + +YA  G      ++   M E+
Sbjct: 581 SSIYAAKGKWSNVAQLRRGMREK 603



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 197/398 (49%), Gaps = 12/398 (3%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I      G ++ S+ +F   KE DS  W  +I   + N    E++ L+  M +E   + 
Sbjct: 210 MITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMD 269

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            + + SVL AC  L  L  G+++H  II+ G++ +  + ++++  Y +   +  A  VF 
Sbjct: 270 QYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFK 329

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           +M +++VVSW++++  Y  N    E +++F  M R G+EPD  T+ S+  +C  L SL  
Sbjct: 330 RMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEE 389

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
               H   L   +     + N+ I +Y KCG +  + + F ++  R   SWTA++S Y +
Sbjct: 390 GAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQ 449

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYD 333
            G   + ++ F +ML    +P+ +T I VL +C+  G +  G+     +++  G+ P  D
Sbjct: 450 FGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSD 509

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISE---YARKGMSKEALELLVQ 389
           +    +I+ +   G++ E +  I+ +    + + W  L+S    Y  + + K A E L++
Sbjct: 510 HY-TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLE 568

Query: 390 MQTWGLMPDSFSVASSLSAC----GNVGSLQLGLQIHG 423
           +      P  + + SS+ A      NV  L+ G++  G
Sbjct: 569 LDPQN--PAGYILLSSIYAAKGKWSNVAQLRRGMREKG 604



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 165/367 (44%), Gaps = 46/367 (12%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           +  +C  LR L     +H  ++ +G +++    + L++ Y +  S+R +  VF      +
Sbjct: 276 VLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKN 335

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  ++  Y  N F EE++ ++  M R      +F   SV+ +C++L  L  G + H 
Sbjct: 336 VVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHC 395

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + +  G      +  +++  YG+ G ++D+ ++FD+M+ RD VSW+++++ Y      +E
Sbjct: 396 QALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANE 455

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  M+ +G++PD VT +++  AC          S  G V R +   +  L +  I+
Sbjct: 456 TIDLFERMLVQGLKPDAVTFIAVLSAC----------SRAGLVERGQQYFESMLKDHGII 505

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
            +S                      +T MI  + R+G  ++A ++F+  +     P+ I 
Sbjct: 506 PFSD--------------------HYTCMIDLFGRAGRLEEA-KNFINKMPF--SPDSIG 542

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA----LIEFYAECGKMSECEKV 355
             T+L SC   G    GK     ++      E D   PA    L   YA  GK S   ++
Sbjct: 543 WATLLSSCRLYGNEEIGKWAAESLL------ELDPQNPAGYILLSSIYAAKGKWSNVAQL 596

Query: 356 IHAIGER 362
              + E+
Sbjct: 597 RRGMREK 603



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
           C       + K +H  +I      + ++   L + Y+K G++  A+ VFD M + N  SW
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE--VTFMNILWACSHSGSVEEGKFYFNAM 626
           + M+  Y   G L+    +F       I PN   V++ +++      GSV E    +N+M
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFS------IMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSM 128

Query: 627 RIFGV-EPDLQHYACMVDLLSRSGDIE 652
              GV   +   ++ M+ L+S  G ++
Sbjct: 129 MKDGVLNLNRITFSTMLLLVSSQGCVD 155


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 171/488 (35%), Positives = 277/488 (56%), Gaps = 13/488 (2%)

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVLGSCAGLGWLREGKSV 319
           T  +  ++  +  +G  + AL  F++ML        +  T    L SC+ +  L  G+ V
Sbjct: 83  TPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGV 142

Query: 320 HCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGM 379
               +++G+  +   L  +LI  YA CG ++    V  A  E  ++ WN +++ Y + G 
Sbjct: 143 QAYAVKRGLVADRFVLS-SLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSS 438
             E +E+   M   G+  D  ++ S ++ACG +G  +LG  + GHV +    ++  + ++
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           L+DMY+KCG    A  LF+ +Q + VV W++MI G+ Q     EA+ LF +M L  +E +
Sbjct: 262 LMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPN 321

Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDI----YIDTALTDMYAKCGDLQTAQ 554
           +VT ++ + AC+ +G LE GKWVH    SY  RK +     + TAL D YAKCG +  A 
Sbjct: 322 DVTMVSVLSACAVLGALETGKWVH----SYVRRKRLSLTTILGTALVDFYAKCGCIDDAV 377

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
             F+SM  +N  +W+A+I     +G+  +A  LF  M ++GI+P +VTF+ +L ACSHS 
Sbjct: 378 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSC 437

Query: 615 SVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            VEEG+ +F++M R +G++P ++HY CMVDLL R+G ++ A++ I +MP   N  IW AL
Sbjct: 438 LVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRAL 497

Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
           L+ C +H+ + + +   K++     + +G Y LLSNIYA  G W +   VR  M+  G++
Sbjct: 498 LSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIE 557

Query: 734 KVPGYSTI 741
           K PG S I
Sbjct: 558 KTPGCSLI 565



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 181/330 (54%), Gaps = 7/330 (2%)

Query: 359 IGERNILS---WNMLISEYARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVG 413
           +G R  LS   +N+L+  +   G  ++AL L ++M         D  + A +L +C  + 
Sbjct: 75  LGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMC 134

Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           +L +G  +  + +K     D FV SSLI MY+ CG    A L+F+  ++  VVMWN+++ 
Sbjct: 135 ALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVA 194

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            + +NG+ +E + +F  M    +  DEVT ++ + AC  IG  + GKWV   +   G+ +
Sbjct: 195 AYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLAR 254

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +  + TAL DMYAKCG++  A+R+FD M  R+VV+WSAMI  Y    Q  +A  LF +M 
Sbjct: 255 NPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQ 314

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIE 652
            + ++PN+VT +++L AC+  G++E GK+  + +R   +         +VD  ++ G I+
Sbjct: 315 LARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCID 374

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
            A +   SMP   N   W AL+ G   + R
Sbjct: 375 DAVEAFESMPV-KNSWTWTALIKGMATNGR 403



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 150/567 (26%), Positives = 272/567 (47%), Gaps = 22/567 (3%)

Query: 13  LTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRL-VFDTFKEP--DSFMWAVLIK 68
           L +LHA L+ +G L     +   L+E+ A   +L    + +F     P   +  + VL++
Sbjct: 32  LPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMR 91

Query: 69  CYMWNNFFEESILLYHKMIREQAT--ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
            ++     E+++ L+ +M+   +            L++CS +  L  G  V    +K G 
Sbjct: 92  AFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGL 151

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             D  + +S++  Y   G +  AR VFD      VV W++I+A+Y  N D  E ++MF  
Sbjct: 152 VADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKG 211

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
           M+  GV  D VT++S+  ACG +   +  + + GHV    +  +  L  + + MY+KCG+
Sbjct: 212 MLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGE 271

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +  A R F  ++ R   +W+AMIS Y ++   ++AL  F +M   + EPN +T+++VL +
Sbjct: 272 IGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSA 331

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA LG L  GK VH  + RK +      LG AL++FYA+CG + +  +   ++  +N  +
Sbjct: 332 CAVLGALETGKWVHSYVRRKRLS-LTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWT 390

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  LI   A  G  +EALEL   M+  G+ P   +    L AC +   ++ G +    + 
Sbjct: 391 WTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMA 450

Query: 427 KIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN-GNS 480
           +       V+    ++D+  + G  + AY     +  + + V+W +++  C  ++N G  
Sbjct: 451 RDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIG 510

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-----IY 535
            EA+     + LN     +   L+ I A +  GQ +    V  ++   G+ K      I 
Sbjct: 511 EEALKQI--ISLNPSHSGDYVLLSNIYASA--GQWKDAAMVRKEMKDRGIEKTPGCSLIE 566

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSE 562
           +D  + + +A+  D    + ++  + E
Sbjct: 567 LDGVVFEFFAEDSDHPELREIYQKVEE 593



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 9/396 (2%)

Query: 4   FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
            +SC+ +  L     + A+ +  GL  D    + LI  YA  G + ++RLVFD  +E   
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGV 186

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
            MW  ++  Y+ N  + E + ++  M+            SV+ AC  +GD   G+ V G 
Sbjct: 187 VMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGH 246

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           + + G  ++  + T+++  Y + G +  AR++FD M SRDVV+WS++I+ Y       E 
Sbjct: 247 VDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREA 306

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           L +F  M    VEP+ VTM+S+  AC  L +L   + +H +V R+++ +   LG + +  
Sbjct: 307 LGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDF 366

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG +  A   F  +  + + +WTA+I     +G  ++ALE F  M E   EP  +T 
Sbjct: 367 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTF 426

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           I VL +C+    + EG+     + R  G+ P  ++ G  +++     G + E  + I  +
Sbjct: 427 IGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYG-CMVDLLGRAGLVDEAYQFIRTM 485

Query: 360 G-ERNILSWNMLISEYA---RKGMSKEALELLVQMQ 391
             E N + W  L+S  A     G+ +EAL+ ++ + 
Sbjct: 486 PIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLN 521


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 177/541 (32%), Positives = 300/541 (55%), Gaps = 5/541 (0%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           SL + C  + S+     I  H L+R       LGN  I  Y KCG ++ A + F ++  R
Sbjct: 82  SLIQQCIGIKSITDITKIQSHALKRGFH--HSLGNKLIDAYLKCGSVVYARKVFDEVPHR 139

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
              +W +MI+ Y R+G  ++A++ + +M+     P+  T  +V  + + LG + EG+  H
Sbjct: 140 HIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAH 199

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            Q +  G+G    ++G AL++ YA+ GKM +   V   +  ++++ +  LI  Y+  G  
Sbjct: 200 GQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGED 259

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSL 439
            E+L++   M   G+  + ++++S L  CGN+  L  G  IHG ++K   +     Q+SL
Sbjct: 260 GESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSL 319

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           + MY +CG  + +  +F++    + V W S+I G  QNG    A+  F QM  + +  + 
Sbjct: 320 LTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNS 379

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            T  + ++ACS++  LE+GK +H  ++ +G+  D Y+  AL D Y KCG  + A+ VF+ 
Sbjct: 380 FTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNG 439

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
           + E +VVS ++MI  Y  +G  ++A  LF  M D+G++PN VT++ +L AC+++G +EEG
Sbjct: 440 LLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEG 499

Query: 620 KFYFNAMRIFG-VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
              F++ R  G +E    HYACMVDLL R+G ++ A  +I+ +   ++  IW  LL+ CR
Sbjct: 500 CHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACR 558

Query: 679 IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
           IH  +++ K +   +      D G + LLSN+YA  GNW +  +++S M    LKK P  
Sbjct: 559 IHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAM 618

Query: 739 S 739
           S
Sbjct: 619 S 619



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 254/486 (52%), Gaps = 15/486 (3%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L + C  ++ +T   ++ +H L  G H+      +LI++Y + GS+  +R VFD      
Sbjct: 83  LIQQCIGIKSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCGSVVYARKVFDEVPHRH 140

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  +I  Y+ N   +E+I +Y +M+ +      F + SV +A S LG +  G++ HG
Sbjct: 141 IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG 200

Query: 120 RIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           + +  G    +V + ++++  Y +FG + DAR V D++  +DVV ++++I  Y  + +  
Sbjct: 201 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 260

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L++F +M ++G+E +  T+ S+   CG L  L   R IHG +++  ++       S +
Sbjct: 261 ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLL 320

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY +CG +  + + F +       +WT++I    ++G  + AL  F +ML     PN  
Sbjct: 321 TMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSF 380

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL +VL +C+ L  L +GK +H  +++ G+  +  Y+G ALI+FY +CG       V + 
Sbjct: 381 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDID-KYVGAALIDFYGKCGSTEIARSVFNG 439

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           + E +++S N +I  YA+ G   EAL+L   M+  GL P++ +    LSAC N G L+ G
Sbjct: 440 LLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEG 499

Query: 419 LQIHGHV-----IKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
             I         I++  KD +  + ++D+  + G    A +L  ++    VV+W +++  
Sbjct: 500 CHIFSSARNSGNIEL-TKDHY--ACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSA 556

Query: 474 FYQNGN 479
              +G+
Sbjct: 557 CRIHGD 562



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 273/562 (48%), Gaps = 16/562 (2%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           F +S +   K+   +   S  +Y S+++ C  +  +    K+    +K GF     +   
Sbjct: 58  FSQSNIKIRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNK 115

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  Y + G +  ARKVFD++  R +V+W+S+IASY  N    E + ++  MV +G+ PD
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 175

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-LGNSFIVMYSKCGDLLSAERTF 254
             T  S+ +A  +L  +   +  HG  +   + +    +G++ + MY+K G +  A    
Sbjct: 176 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 235

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  +    +TA+I  Y+  G   ++L+ F  M +   E N  TL +VL  C  L  L 
Sbjct: 236 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 295

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            G+ +H  I++ G+         +L+  Y  CG + +  KV       N ++W  +I   
Sbjct: 296 SGRLIHGLIVKAGLESAVAS-QTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGL 354

Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
            + G  + AL    QM    + P+SF+++S L AC ++  L+ G QIH  V+K     D+
Sbjct: 355 VQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDK 414

Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
           +V ++LID Y KCG   +A  +F  + +  VV  NSMI  + QNG   EA+ LF  M   
Sbjct: 415 YVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDT 474

Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG---VRKDIYIDTALTDMYAKCGDL 550
            LE + VT+L  + AC+N G LE+G  +     + G   + KD Y    + D+  + G L
Sbjct: 475 GLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHY--ACMVDLLGRAGRL 532

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE----VTFMNI 606
           + A+ + + ++  +VV W  ++    +HG +  A  +  +++D  + P +    V   N+
Sbjct: 533 KEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID--LAPEDGGTHVLLSNL 590

Query: 607 LWACSHSGSVEEGKFYFNAMRI 628
             +  +   V E K     MR+
Sbjct: 591 YASTGNWSKVIEMKSAMREMRL 612


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 196/642 (30%), Positives = 331/642 (51%), Gaps = 19/642 (2%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC--LDDARKVFDKMTSRDVVSWSSIIAS 170
           +  + H  ++K GF         +L  Y       L  AR+VFD++  RD VSW++++A+
Sbjct: 9   AAARSHASLLKSGFAAP-TPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAA 67

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA--RSIHGHVLRRKIK 228
           +  +    E  ++  +M  +G+  +   + S   +     + RPA    +    L+  + 
Sbjct: 68  HAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAA--VARRPAIGAQLQSLALKSGLA 125

Query: 229 IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM 288
            +    ++ + +Y+KCG +  A + F  + +R T SW A+I+ Y  SG    ALE F++M
Sbjct: 126 NNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEM 185

Query: 289 LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
                 P+  T  ++L +  G       + +H +I++ G       L  A I  Y++CG 
Sbjct: 186 EREGLVPDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAA-ITAYSQCGS 243

Query: 349 MSECEKVIHAIGE-RNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSL 406
           + +  ++   IG+ R+++SWN ++  Y   GM  EA++  V+M Q  G+ PD +S  S +
Sbjct: 244 LKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSII 303

Query: 407 SACGNVG-SLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSK----CGFKNLAYLLFERIQ 460
           S+C   G     G  IHG VIK   +    V ++LI MY++    C  ++ AY  F  + 
Sbjct: 304 SSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMED-AYKCFNSLV 362

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
            K  V WNSM+ G+ Q+G S +A+  F  M    +  DE  F  A+++ S +  L+ GK 
Sbjct: 363 LKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQ 422

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H  +I  G   + ++ ++L  MY+K G +  A++ F+   + + V W+AMI  Y  HGQ
Sbjct: 423 IHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQ 482

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYA 639
             +   LF +ML      + +TF+ ++ +CSH+G V+EG    N M   +GV   ++HYA
Sbjct: 483 AENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYA 542

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
           C VDL  R+G ++ A K+I SMPF  +  +W  LL  CRIH  +++   +   L V    
Sbjct: 543 CGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPR 602

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            +  Y LLS++Y+  G W +   V+ +M+  GL KVPG+S I
Sbjct: 603 QHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLI 644



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 299/591 (50%), Gaps = 16/591 (2%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGS--LRSSRLVFDTFKEPDSFMWAVLIKCYM 71
            R HA LL +G    P    +L+ +Y+      L ++R VFD     D   W  L+  + 
Sbjct: 11  ARSHASLLKSGF-AAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHA 69

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            +    E+  L   M  +    + F   S LR+ +       G ++    +K G   +  
Sbjct: 70  ASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVF 129

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
             +++L  Y + G + DAR+VFD M  R+ VSW+++IA Y ++ D++  L++F  M REG
Sbjct: 130 AASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG 189

Query: 192 VEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           + PD  T  SL  A  G  C L     +HG +++    +   + N+ I  YS+CG L  +
Sbjct: 190 LVPDEATFASLLTAVEGPSCFL--MHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDS 247

Query: 251 ERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCA 308
            R F  I + R   SW AM+  Y  +G   +A++ FV+M+ E    P++ +  +++ SC+
Sbjct: 248 RRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCS 307

Query: 309 GLGW-LREGKSVHCQIIR---KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
             G    +G+ +H  +I+   +G+ P  + L  A+   Y E   M +  K  +++  ++ 
Sbjct: 308 EHGHDDHQGRVIHGLVIKSALEGVTPVCNAL-IAMYTRYNENCMMEDAYKCFNSLVLKDT 366

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SWN +++ Y++ G+S +AL+    M +  +  D ++ +++L +   +  LQLG QIHG 
Sbjct: 367 VSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGL 426

Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           VI      ++FV SSLI MYSK G  + A   FE   + S V WN+MI G+ Q+G +   
Sbjct: 427 VIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENV 486

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTD 542
             LF++M      +D +TF+  I +CS+ G +++G  + + +   YGV   +       D
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546

Query: 543 MYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +Y + G L  A+++ DSM  E + + W  ++    +HG +  A+ +   + 
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLF 597


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 183/534 (34%), Positives = 294/534 (55%), Gaps = 49/534 (9%)

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           S  G+L  A   F  IE+     W  MI   + S     A++ +V+ML    EPN  T  
Sbjct: 77  SPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFP 136

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE-------- 353
            +L SCA +G  +EGK +H  +++ G+  +  ++  +LI  YA+ G++   E        
Sbjct: 137 FLLKSCAKVGATQEGKQIHGHVLKLGLESD-PFVHTSLINMYAQNGELGYAELVFSKSSL 195

Query: 354 -----------------------KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
                                  ++   I  R+ +SWN +I+ YA+ G  +EAL    +M
Sbjct: 196 RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLG----LQIHGHVIKIDCKDEFVQSSLIDMYSKC 446
           +   + P+  ++ + LSAC   GSL+LG      I  H +  + +   + ++LIDMYSKC
Sbjct: 256 KRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLR---LVNALIDMYSKC 312

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G  + A  LFE I +K ++ WN MI G+    +  EA+ LF +M  + +E ++VTF++ +
Sbjct: 313 GDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSIL 372

Query: 507 QACSNIGQLEKGKWVHHKLISYGVRK-----DIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
            AC+ +G L+ GKW+H    +Y  +K     +  + T+L DMYAKCG+++ A++VF  M 
Sbjct: 373 PACAYLGALDLGKWIH----AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK 428

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
            +++ SW+AMI    MHG  N A  LF+QM D G +P+++TF+ +L ACSH+G VE G+ 
Sbjct: 429 PKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQ 488

Query: 622 YFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
            F++M   + + P LQHY CM+DLL R+G  + A  ++ +M    +G+IWG+LL  CR+H
Sbjct: 489 CFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVH 548

Query: 681 KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             +++ +   K L      + G Y LLSNIYA  G WD+  ++R+ +   G+KK
Sbjct: 549 GNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 164/574 (28%), Positives = 284/574 (49%), Gaps = 41/574 (7%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEP 58
           + L  +C + + L ++H+ ++ TGLH    A ++LIE  + +  G+L  + L+F++ ++P
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + F+W  +I+    ++    +I  Y +M+      +++ +P +L++C+ +G    G+++H
Sbjct: 96  NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155

Query: 119 GRIIKCGFDKDDVIQTSILCTY---GEFG----------------------------CLD 147
           G ++K G + D  + TS++  Y   GE G                            CLD
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           DAR++F+++  RD VSW+++IA Y  +    E L  F  M R  V P+  TM+++  AC 
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
           +  SL     +   +    +  +  L N+ I MYSKCGDL  A   F  I ++   SW  
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  Y+    +++AL  F KM +   EPN +T +++L +CA LG L  GK +H  I +K 
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +G     L  +LI+ YA+CG +   ++V   +  +++ SWN +IS  A  G +  ALEL 
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELF 455

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQ-SSLIDMYSK 445
            QM+  G  PD  +    LSAC + G ++LG Q    +++  D   +      +ID+  +
Sbjct: 456 RQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGR 515

Query: 446 CGFKNLAYLLFERIQQKSV-VMWNSMICGFYQNGN-SLEAINLFHQMYLNCLEMDEVTFL 503
            G  + A  L + ++ K    +W S++     +GN  L      H   L          L
Sbjct: 516 AGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLL 575

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRK--DIY 535
           + I A +  G+ +    +  KL   G++K  DIY
Sbjct: 576 SNIYATA--GRWDDVARIRTKLNDKGMKKXQDIY 607



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 167/575 (29%), Positives = 272/575 (47%), Gaps = 84/575 (14%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL--CTYGEFGCLDDARKVFDKMT 157
           ++L  C S  +L   +++H +IIK G        + ++  C    FG L  A  +F+ + 
Sbjct: 37  TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             +   W+++I     ++     +  +  M+  GVEP+  T   L ++C ++ + +  + 
Sbjct: 94  QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE-------------------------- 251
           IHGHVL+  ++ D  +  S I MY++ G+L  AE                          
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213

Query: 252 -----RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
                R F +I  R   SW AMI+ Y +SG F++AL  F +M      PN  T++TVL +
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           CA  G L  G  V   I   G+G     +  ALI+ Y++CG + +   +   I E++I+S
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVN-ALIDMYSKCGDLDKARDLFEGICEKDIIS 332

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN++I  Y+     KEAL L  +MQ   + P+  +  S L AC  +G+L LG  IH ++ 
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392

Query: 427 K--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
           K  +   +  + +SLIDMY+KCG    A  +F  ++ KS+  WN+MI G   +G++  A+
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMAL 452

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
            LF QM     E D++TF+  + ACS+ G +E G+                         
Sbjct: 453 ELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR------------------------- 487

Query: 545 AKCGDLQTAQRVFDSMSERNVVS-----WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
                     + F SM E   +S     +  MID  G  G  ++A +L K M    +KP+
Sbjct: 488 ----------QCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNM---EMKPD 534

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
              + ++L AC   G+VE G+  F A  +F +EP+
Sbjct: 535 GAIWGSLLGACRVHGNVELGE--FAAKHLFELEPE 567



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 233/456 (51%), Gaps = 48/456 (10%)

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
           FQ   +   K+L+    P+L    T+L +C     L   K +H QII+ G+     +   
Sbjct: 19  FQPTSDPPYKLLQ--NHPSL----TLLSTCKSFQNL---KQIHSQIIKTGLH-NTQFALS 68

Query: 338 ALIEFYA--ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            LIEF A    G +S    +  +I + N   WN +I   +       A++  V+M   G+
Sbjct: 69  KLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGV 128

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYL 454
            P+S++    L +C  VG+ Q G QIHGHV+K+  + D FV +SLI+MY++ G    A L
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188

Query: 455 -------------------------------LFERIQQKSVVMWNSMICGFYQNGNSLEA 483
                                          LFE I  +  V WN+MI G+ Q+G   EA
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEA 248

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           +  F +M    +  +E T +T + AC+  G LE G WV   +  +G+  ++ +  AL DM
Sbjct: 249 LAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDM 308

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y+KCGDL  A+ +F+ + E++++SW+ MI  Y       +A +LF++M  S ++PN+VTF
Sbjct: 309 YSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTF 368

Query: 604 MNILWACSHSGSVEEGKFY--FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
           ++IL AC++ G+++ GK+   +   +  G+  +   +  ++D+ ++ G+IE A ++   M
Sbjct: 369 VSILPACAYLGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGNIEAAKQVFAGM 427

Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
              + GS W A+++G  +H   ++   + +++   G
Sbjct: 428 KPKSLGS-WNAMISGLAMHGHANMALELFRQMRDEG 462


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/629 (29%), Positives = 323/629 (51%), Gaps = 8/629 (1%)

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           + H ++I+ G+  D    T +     + G    AR +F  +   D+  ++ +I  +  + 
Sbjct: 26  ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP 85

Query: 176 DVSEGLKMFHSMVREGVEPD-FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           D S      H +    + PD F    +++ +  +   +     +H H +      +  + 
Sbjct: 86  DASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGM----CLHAHAVVDGFDSNLFVA 141

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           ++ + +Y K   +  A + F K+  R T  W  MI+   R+  +  +++ F  M+     
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
            +  T+ TVL + A +  ++ G  + C  ++ G   + DY+   LI  +++C  +     
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFD-DYVLTGLISVFSKCEDVDTARL 260

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   I + +++S+N LIS ++  G ++ A++   ++   G    S ++   +      G 
Sbjct: 261 LFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGH 320

Query: 415 LQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L L   I G  +K        V ++L  +YS+    +LA  LF+   +K+V  WN+MI G
Sbjct: 321 LHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + Q+G +  AI+LF +M       + VT  + + AC+ +G L  GK VH  + S  + ++
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQN 440

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           IY+ TAL DMYAKCG++  A ++FD  SE+N V+W+ MI  YG+HG  ++A  LF +ML 
Sbjct: 441 IYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLH 500

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIE 652
            G +P+ VTF+++L+ACSH+G V EG   F+AM   + +EP  +HYACMVD+L R+G +E
Sbjct: 501 LGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLE 560

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A + I  MP     ++WG LL  C IHK  ++ +   + L      + GYY LLSNIY+
Sbjct: 561 KALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYS 620

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            E N+ +   VR  ++   L K PG + I
Sbjct: 621 VERNFPKAASVREAVKKRNLSKTPGCTLI 649



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 300/610 (49%), Gaps = 18/610 (2%)

Query: 5   RSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWA 64
           ++CT    L   HA L+  G  +D    T+L +   ++G+ R +R +F +  +PD F++ 
Sbjct: 17  KACT-FPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFN 75

Query: 65  VLIKCYMWNNFFEESILLYHKMIREQATIS--NFIYPSVLRACSSLGDLGSGEKVHGRII 122
           VLIK + ++   + S + ++  + +  T+S  NF Y     A S+  D   G  +H   +
Sbjct: 76  VLIKGFSFSP--DASSISFYTHLLKNTTLSPDNFTYAF---AISASPDDNLGMCLHAHAV 130

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
             GFD +  + ++++  Y +F  +  ARKVFDKM  RD V W+++I     N    + ++
Sbjct: 131 VDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQ 190

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  MV +GV  D  T+ ++  A  E+  ++    I    L+     D  +    I ++S
Sbjct: 191 VFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFS 250

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KC D+ +A   F  I K    S+ A+IS ++ +G  + A++ F ++L   +  +  T++ 
Sbjct: 251 KCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVG 310

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKG--MGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           ++   +  G L     +    ++ G  + P    +  AL   Y+   ++    ++     
Sbjct: 311 LIPVSSPFGHLHLACCIQGFCVKSGTILQPS---VSTALTTIYSRLNEIDLARQLFDESS 367

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E+ + +WN +IS YA+ G+++ A+ L  +M T    P+  ++ S LSAC  +G+L  G  
Sbjct: 368 EKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKS 427

Query: 421 IHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
           +H  +   + +   +V ++LIDMY+KCG  + A  LF+   +K+ V WN+MI G+  +G 
Sbjct: 428 VHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGY 487

Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDT 538
             EA+ LF++M     +   VTFL+ + ACS+ G + +G  + H +++ Y +        
Sbjct: 488 GDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYA 547

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            + D+  + G L+ A      M  E     W  ++    +H   N A    +++ +  + 
Sbjct: 548 CMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFE--LD 605

Query: 598 PNEVTFMNIL 607
           P  V +  +L
Sbjct: 606 PGNVGYYVLL 615


>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
          Length = 638

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 188/591 (31%), Positives = 309/591 (52%), Gaps = 7/591 (1%)

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M  R+ ++W+S+I  Y D+ +    L +   M + G   +  T   + +AC         
Sbjct: 1   MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           +  H  V++     +  +G S I MY++      AE+ F  +  +    +  MI  Y R+
Sbjct: 61  QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  +KA+  F+ ML    +PN  T   ++ +C G   + EG+       + G   E   +
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETS-I 179

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
           G A+I  Y + G   E E++  A+ +RN++SW  LIS Y R G  K+A++  +++   G+
Sbjct: 180 GNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGV 239

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAY 453
             DS  + + L  C    +L+LGLQIHG VIK+   C    + ++L+D+Y+KCG    A 
Sbjct: 240 NFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVN-IGTALVDLYAKCGNLMSAR 298

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLE--AINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           ++F+ +  K +  +N+++ GF +N    E   I LF+   L+ ++ D VTF   +   +N
Sbjct: 299 MVFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSAN 358

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
              L +G+  H   I  G   D+ +  A+  MYAKCG ++ A R+F+ M++ + +SW+AM
Sbjct: 359 HSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAM 418

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FG 630
           I  Y +HGQ      LF++M+     P+E+T ++IL AC++SG   +G   FN M   +G
Sbjct: 419 ISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYG 478

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
           ++P L+HYACMVDLL R+G +  A  +I+  PF  +  +W  L+N C++    +  K   
Sbjct: 479 IKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLAS 538

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           K L      + G Y L+SN+YA E   DE  KVR++M    L K  G S I
Sbjct: 539 KYLLELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWI 589



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 258/530 (48%), Gaps = 8/530 (1%)

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           ++  W  LIK Y+ +N FE ++ +  +M +    ++      +L+ACSS      G++ H
Sbjct: 5   NTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQFH 64

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             +IKCGFD++ V+ TS++  Y       DA KVFD M  +DV  ++ +I  Y    +  
Sbjct: 65  CFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNGE 124

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           + +++F +M+  G++P+  T  ++  AC     +       G   +     +  +GN+ I
Sbjct: 125 KAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAII 184

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY K G    AER F  +  R   SWTA+IS Y RSG  +KA+++F+++       +  
Sbjct: 185 NMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSS 244

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            L T+L  C+    L  G  +H  +I+ G     + +G AL++ YA+CG +     V   
Sbjct: 245 LLTTILDGCSECRNLELGLQIHGLVIKLGYACAVN-IGTALVDLYAKCGNLMSARMVFDG 303

Query: 359 IGERNILSWNMLIS---EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
           +  + I S+N +++   E +R G  ++ + L    +  G+ PD  + +  LS   N  +L
Sbjct: 304 LSSKRIASFNAILAGFMENSRDG-EEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTL 362

Query: 416 QLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
             G   H + IK   + D  V +++I MY+KCG    A+ +F  +     + WN+MI  +
Sbjct: 363 GRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAY 422

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKD 533
             +G   + + LF +M       DE+T L+ +QAC+  G    G  + + +   YG++  
Sbjct: 423 ALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPL 482

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFD-SMSERNVVSWSAMIDCYGMHGQLN 582
           +     + D+  + G L  A  + + S   ++ + W  +++   + G  N
Sbjct: 483 LEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRN 532



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 190/411 (46%), Gaps = 7/411 (1%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           + H  ++  G   +    T LI  Y        +  VFD+    D   +  +I  Y    
Sbjct: 62  QFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAG 121

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLG--SGEKVHGRIIKCGFDKDDVI 132
             E++I ++  M+      +++ + +++ AC   GDLG   GE+  G   K GF  +  I
Sbjct: 122 NGEKAIRVFINMLNAGLQPNDYTFTNIISACD--GDLGIEEGEQFLGLSFKYGFLNETSI 179

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             +I+  YG+ G   +A ++F  MT R+++SW+++I+ Y  + D  + +  F  +   GV
Sbjct: 180 GNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGV 239

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
             D   + ++ + C E  +L     IHG V++        +G + + +Y+KCG+L+SA  
Sbjct: 240 NFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARM 299

Query: 253 TFVKIEKRCTTSWTAMISCY--NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
            F  +  +   S+ A+++ +  N     +  +  F        +P+++T   +L   A  
Sbjct: 300 VFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANH 359

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L  G+  H   I+ G   +   +  A+I  YA+CG + E  ++ + + + + +SWN +
Sbjct: 360 STLGRGRCYHAYAIKTGFEADLS-VANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAM 418

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           IS YA  G   + L L  +M      PD  ++ S L AC   G  + G+ +
Sbjct: 419 ISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISL 469



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 104/202 (51%), Gaps = 2/202 (0%)

Query: 7   CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
           C NL    ++H  ++  G        T L++ YA+ G+L S+R+VFD         +  +
Sbjct: 256 CRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIASFNAI 315

Query: 67  IKCYMWN--NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
           +  +M N  +  E+ I+L++    +        +  +L   ++   LG G   H   IK 
Sbjct: 316 LAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKT 375

Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
           GF+ D  +  +++  Y + G +++A ++F+ M   D +SW+++I++Y  +   ++ L +F
Sbjct: 376 GFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLF 435

Query: 185 HSMVREGVEPDFVTMLSLAEAC 206
             M+++   PD +T+LS+ +AC
Sbjct: 436 EEMIKKEFAPDEITILSILQAC 457


>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
          Length = 711

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/572 (31%), Positives = 303/572 (52%), Gaps = 4/572 (0%)

Query: 171 YFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKID 230
           YF +       ++F   V++  +    +       C +  + +    IH H++      D
Sbjct: 126 YFADLSTESARELFTEFVKDWNKQKLESKYYEGILCIDKKAKKQGHLIHTHLITNGFGSD 185

Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
             L    I+ Y K GD+++A   F  + +R   SWTAM+S Y+++G F+KA   F  M  
Sbjct: 186 LHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRH 245

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
              + N  T  + L +C  L  L  G  V    I+KG   E  ++  AL++F+++CGKM 
Sbjct: 246 CGVKANQFTYGSALRACTSLRCLDMGIQVQ-GCIQKGRFVENLFVKSALVDFHSKCGKME 304

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
           +   +   + ER+++SWN +I  YA +G + ++  +   M   GL+PD +++ S L A  
Sbjct: 305 DASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 364

Query: 411 NVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
             G L +  QIHG + ++     + V   LI+ Y+K G    A  L + + +K +    +
Sbjct: 365 EGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTA 424

Query: 470 MICGFYQNG-NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           +I G+   G  S++A++LF +M    + MD+V   + +  C+N+     G  +H   + Y
Sbjct: 425 LITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKY 484

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
               D+ +  AL DMYAK G+++ A+R FD M E+NV+SW+++I  Y  HG  + A SL+
Sbjct: 485 QPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLY 544

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSR 647
           K+M   G KPN+VTF+++L+ACSH+G   EG   FN M   + ++P  +HY+CMVDL +R
Sbjct: 545 KKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFAR 604

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLL 707
            G +E A+ ++  +    N S+WGA+L    I+  + + K     L      ++  Y +L
Sbjct: 605 QGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVL 664

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           ++IY+  G WD+  K+R +ME    KK  GYS
Sbjct: 665 ASIYSAAGLWDDAWKIRKLMEERSTKKNAGYS 696



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 232/461 (50%), Gaps = 7/461 (1%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H HL+  G   D   +T+LI  Y ++G + ++R VFD   E     W  ++  Y  N  
Sbjct: 173 IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 232

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
           FE++ +L+  M       + F Y S LRAC+SL  L  G +V G I K  F ++  ++++
Sbjct: 233 FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSA 292

Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
           ++  + + G ++DA  +F  M  RDVVSW+++I  Y       +   MF SM+R G+ PD
Sbjct: 293 LVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPD 352

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
             T+ S+  A  E   L  A  IHG + +        +    I  Y+K G L SA+    
Sbjct: 353 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 412

Query: 256 KIEKRCTTSWTAMISCYNRSGWFQ-KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            + K+   S TA+I+ Y   G +   AL+ F +M ++    + + L ++L  CA L    
Sbjct: 413 GMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFA 472

Query: 315 EGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
            G  +H   ++    P YD  +G ALI+ YA+ G++ + ++    + E+N++SW  LIS 
Sbjct: 473 LGTQIHAFALK--YQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISG 530

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI-KIDCKD 432
           YA+ G    A+ L  +M++ G  P+  +  S L AC + G    G +   +++ K + K 
Sbjct: 531 YAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKP 590

Query: 433 EFVQ-SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI 471
                S ++D++++ G    AY L  +I  K +  +W +++
Sbjct: 591 RAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAIL 631



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 247/505 (48%), Gaps = 11/505 (2%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
           G  +H  +I  GF  D  + T ++  Y + G +  AR VFD M  R VVSW+++++ Y  
Sbjct: 170 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 229

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
           N    +   +F  M   GV+ +  T  S   AC  L  L     + G + + +   +  +
Sbjct: 230 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFV 289

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            ++ +  +SKCG +  A   F  + +R   SW AMI  Y   G+   +   F  ML    
Sbjct: 290 KSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 349

Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
            P+  TL +VL + A  G L     +H  I + G G  YD +   LI  YA+ G +   +
Sbjct: 350 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS-YDIVTGLLINAYAKNGSLRSAK 408

Query: 354 KVIHAIGERNILSWNMLISEYARKGM-SKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            +   + ++++ S   LI+ YA +G+ S +AL+L  +M    +  D   + S L+ C N+
Sbjct: 409 DLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANL 468

Query: 413 GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
            S  LG QIH   +K     D  + ++LIDMY+K G    A   F+ +++K+V+ W S+I
Sbjct: 469 ASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLI 528

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGV 530
            G+ ++G    A++L+ +M     + ++VTFL+ + ACS+ G   +G    + +++ Y +
Sbjct: 529 SGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNI 588

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN----DAA 585
           +      + + D++A+ G L+ A  +   +  + N   W A++    ++G ++     A+
Sbjct: 589 KPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAAS 648

Query: 586 SLFKQMLDSGIKPNEVTFMNILWAC 610
           +LF    ++ +  N V   +I  A 
Sbjct: 649 NLFNMQPENSV--NYVVLASIYSAA 671



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%)

Query: 7   CTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           C NL      T++HA  L     YD      LI+ YA+ G +  ++  FD  +E +   W
Sbjct: 465 CANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISW 524

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
             LI  Y  + +   ++ LY KM  +    ++  + S+L ACS  G    G
Sbjct: 525 TSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 575


>gi|30694836|ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g58590
 gi|332646281|gb|AEE79802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 206/686 (30%), Positives = 337/686 (49%), Gaps = 59/686 (8%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY--------MWNNFFEESILLYHKM 86
           +I  Y ++G +  +  VFD   E +   +  +IK Y         W  F E   + Y   
Sbjct: 55  IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE---MRYFGY 111

Query: 87  IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGC 145
           +  Q+T+S  +      +C+SL D+ +G ++HG  +K G F  D  + T +LC YG    
Sbjct: 112 LPNQSTVSGLL------SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L+ A +VF+ M  + + +W+ +++       + E +  F  +VR G      + L + + 
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
              +  L  ++ +H    ++ +  +  + NS I  Y KCG+   AER F         SW
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            A+I    +S    KAL+ FV M E    PN  T ++VLG  + +  L  G+ +H  +I+
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G       LG ALI+FYA+CG + +       I ++NI+ WN L+S YA K      L 
Sbjct: 345 NGCETGI-VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLS 402

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYS 444
           L +QM   G  P  ++ +++L +C  V  LQ   Q+H  ++++  +D ++V SSL+  Y+
Sbjct: 403 LFLQMLQMGFRPTEYTFSTALKSCC-VTELQ---QLHSVIVRMGYEDNDYVLSSLMRSYA 458

Query: 445 KCGFKNLAYLLFE--------------------------------RIQQKSVVMWNSMIC 472
           K    N A LL +                                 ++Q   V WN  I 
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR- 531
              ++    E I LF  M  + +  D+ TF++ +  CS +  L  G  +H  +       
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC 578

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            D ++   L DMY KCG +++  +VF+   E+N+++W+A+I C G+HG   +A   FK+ 
Sbjct: 579 ADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKET 638

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           L  G KP+ V+F++IL AC H G V+EG   F  M+ +GVEP++ HY C VDLL+R+G +
Sbjct: 639 LSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYL 698

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGC 677
           + A  +I  MPFPA+  +W   L+GC
Sbjct: 699 KEAEHLIREMPFPADAPVWRTFLDGC 724



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 277/607 (45%), Gaps = 46/607 (7%)

Query: 6   SCTNL--RKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC +L  R  T+LH   L  GL   D    T L+  Y  +  L  +  VF+         
Sbjct: 123 SCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET 182

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++       F +E +  + +++R  A+++   +  VL+  S + DL   +++H    
Sbjct: 183 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSAT 242

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G D +  +  S++  YG+ G    A ++F    S D+VSW++II +   + +  + LK
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALK 302

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F SM   G  P+  T +S+      +  L   R IHG +++   +    LGN+ I  Y+
Sbjct: 303 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA 362

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCY-NRSGWFQKALESFVKMLEVKEEPNLITLI 301
           KCG+L  +   F  I  +    W A++S Y N+ G     L  F++ML++   P   T  
Sbjct: 363 KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFS 420

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC--------------- 346
           T L SC     + E + +H  I+R G   + DY+  +L+  YA+                
Sbjct: 421 TALKSCC----VTELQQLHSVIVRMGY-EDNDYVLSSLMRSYAKNQLMNDALLLLDWASG 475

Query: 347 -----------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
                            G+  E  K+I  + + + +SWN+ I+  +R    +E +EL   
Sbjct: 476 PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKH 535

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCG 447
           M    + PD ++  S LS C  +  L LG  IHG + K D  C D FV + LIDMY KCG
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
                  +FE  ++K+++ W ++I     +G   EA+  F +      + D V+F++ + 
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           AC + G +++G  +  K+  YGV  ++       D+ A+ G L+ A+ +   M    +  
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAP 715

Query: 567 SWSAMID 573
            W   +D
Sbjct: 716 VWRTFLD 722



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 274/622 (44%), Gaps = 54/622 (8%)

Query: 100 SVLRACSSLGDLGSGEKVHG-RIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMT 157
           S+L  C         + +H   I  C      V +  +I+  Y + G +  A KVFD+M 
Sbjct: 17  SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+ VS+++II  Y    DV +   +F  M   G  P+  T+  L  +C  L  +R    
Sbjct: 77  ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQ 134

Query: 218 IHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           +HG  L+  + + D  +G   + +Y +   L  AE+ F  +  +   +W  M+S     G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + ++ +  F +++ +       + + VL   + +  L   K +HC   +KG+  E   + 
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +LI  Y +CG     E++    G  +I+SWN +I   A+     +AL+L V M   G  
Sbjct: 255 -SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLL 455
           P+  +  S L     V  L  G QIHG +IK  C+   V  ++LID Y+KCG    + L 
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ I+ K++V WN+++ G Y N +    ++LF QM        E TF TA+++C  + +L
Sbjct: 374 FDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VTEL 431

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKC---------------------------- 547
           ++   +H  ++  G   + Y+ ++L   YAK                             
Sbjct: 432 QQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488

Query: 548 ----GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
               G    + ++  ++ + + VSW+  I          +   LFK ML S I+P++ TF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDL---QHYAC--MVDLLSRSGDIEGAFKMI 658
           ++IL  CS    +  G    +++     + D      + C  ++D+  + G I    K+ 
Sbjct: 549 VSILSLCSKLCDLTLG----SSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVF 604

Query: 659 HSMPFPANGSIWGALLNGCRIH 680
                  N   W AL++   IH
Sbjct: 605 EETR-EKNLITWTALISCLGIH 625


>gi|302809912|ref|XP_002986648.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
 gi|300145536|gb|EFJ12211.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
          Length = 623

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/599 (31%), Positives = 313/599 (52%), Gaps = 32/599 (5%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD---DVIQTSILCTYGEFGCLDDARKVFD 154
           Y  +L+AC+ L  L  G+++H  I+           ++   ++  YG+ G +++AR VF 
Sbjct: 5   YARLLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFA 64

Query: 155 KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLR 213
            M   ++VSW++IIA++    D    L +F +M  E  V PD V+  S+A ACG   S R
Sbjct: 65  SMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANACG---SAR 121

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
            AR IH  V  R    D  +G S I MY+KCG +  A   F  + +R   SW AM+S Y+
Sbjct: 122 EARIIHASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYS 181

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G   + L  F  ML+   +PN +TL+ V+ +C+ L  LR+     C +       E  
Sbjct: 182 QHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLRQADE--CGV------EEEV 233

Query: 334 YLGPALIEFYAECGKMSECEKVIHA-IGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            +  A I  +A+ G +     +  + +  R+++SWN++++ YA  G   EA+ LL QM+ 
Sbjct: 234 AVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAGYANAGRGDEAVVLLRQMEQ 293

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD---------EFVQSSLIDMY 443
            G  PD  +  + L+AC     ++ G  IHG ++ +  +D           V  SL  MY
Sbjct: 294 HGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIV-LQSRDTPALSLRTNAVVGCSLCSMY 352

Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
           ++CG  + A  +F  ++Q++VV WN+MI  + Q+G +  A+ +F  M  + ++ D +T +
Sbjct: 353 ARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRARLALAVFGGMQQHGVKPDAITLI 412

Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM--S 561
           + + AC+  G   +G  VH   +   +R    +D A  +MYAK G +  A+ VF++M   
Sbjct: 413 SVLDACAGAGDARRGSQVHGWSLQLQLRS-AALDNAAVNMYAKSGRVAAAREVFEAMDAQ 471

Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
            R ++SWSAM+  Y   G   +A  LF  M   G++PN VT ++IL ACSH+G ++ G  
Sbjct: 472 RRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACSHAGMLQAGCS 531

Query: 622 YFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIH--SMPFPANGSIWGALLNGC 677
            F +M   +GV P  +H  C+VD+L R+G +E A +++         +   W A+L  C
Sbjct: 532 CFASMAADYGVWPREEHTGCVVDMLGRAGWVEQAHRLVQRSGAGGGGDAQAWMAVLGAC 590



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 285/573 (49%), Gaps = 27/573 (4%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPAS---TRLIESYAEMGSLRSSRLVFDTFK 56
           L ++C  L+ L    R+HAH+L +       ++     LI  Y + G +  +R VF + +
Sbjct: 8   LLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFASME 67

Query: 57  EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGE 115
            P+   W  +I  +        ++ ++  M  E + + + + + SV  AC S  +     
Sbjct: 68  HPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANACGSARE---AR 124

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H  +   GF  D +I TS++  Y + G ++DAR VFD M  R+ VSW+++++ Y  + 
Sbjct: 125 IIHASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYSQHG 184

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
             ++ L +F +M++ GV+P+ VT+L +  AC  L  LR A           ++ +  + N
Sbjct: 185 HGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLRQADEC-------GVEEEVAVRN 237

Query: 236 SFIVMYSKCGDLLSAERTFVK-IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           + I M++K GD+  A   F   +  R   SW  M++ Y  +G   +A+    +M +    
Sbjct: 238 ACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAGYANAGRGDEAVVLLRQMEQHGFH 297

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG-PEYD-----YLGPALIEFYAECGK 348
           P+ +T +  L +C     +  G+S+H +I+ +    P         +G +L   YA CG 
Sbjct: 298 PDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDTPALSLRTNAVVGCSLCSMYARCGS 357

Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           + E   V   + +RN++SWN +I  YA+ G ++ AL +   MQ  G+ PD+ ++ S L A
Sbjct: 358 IDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRARLALAVFGGMQQHGVKPDAITLISVLDA 417

Query: 409 CGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVM 466
           C   G  + G Q+HG  +++  +   + ++ ++MY+K G    A  +FE +  Q+++++ 
Sbjct: 418 CAGAGDARRGSQVHGWSLQLQLRSAALDNAAVNMYAKSGRVAAAREVFEAMDAQRRTIMS 477

Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
           W++M+  +   G++ EA  LFH M    +  + VT ++ + ACS+ G L+ G      + 
Sbjct: 478 WSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACSHAGMLQAGCSCFASMA 537

Query: 527 S-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
           + YGV         + DM  + G ++ A R+  
Sbjct: 538 ADYGVWPREEHTGCVVDMLGRAGWVEQAHRLVQ 570



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 234/482 (48%), Gaps = 35/482 (7%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG---NSFIVMYSKCGDLLSAERTF 254
           T   L +AC  L +L   + IH H+L              N  I MY KCG +  A   F
Sbjct: 4   TYARLLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVF 63

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWL 313
             +E     SW  +I+ +   G  + AL  F  M LE    P+ ++  +V  +C   G  
Sbjct: 64  ASMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANAC---GSA 120

Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
           RE + +H  +  +G   +   +G +LI  YA+CG + +   V  ++ ERN +SWN ++S 
Sbjct: 121 REARIIHASVAARGFLDDV-IIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAMLSG 179

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE 433
           Y++ G   + L L   M   G+ P++ ++   ++AC ++  L+          +   ++E
Sbjct: 180 YSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLR-------QADECGVEEE 232

Query: 434 F-VQSSLIDMYSKCGFKNLAYLLFER-IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
             V+++ I+M++K G  + A  +F   +  + V+ WN M+ G+   G   EA+ L  QM 
Sbjct: 233 VAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAGYANAGRGDEAVVLLRQME 292

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-------SYGVRKDIYIDTALTDMY 544
            +    D VT++  + AC     +E G+ +H +++       +  +R +  +  +L  MY
Sbjct: 293 QHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDTPALSLRTNAVVGCSLCSMY 352

Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
           A+CG +  A  VF  M +RNVVSW+AMI  Y  HG+   A ++F  M   G+KP+ +T +
Sbjct: 353 ARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRARLALAVFGGMQQHGVKPDAITLI 412

Query: 605 NILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD-----LLSRSGDIEGAFKMIH 659
           ++L AC+ +G    G       ++ G    LQ  +  +D     + ++SG +  A ++  
Sbjct: 413 SVLDACAGAGDARRGS------QVHGWSLQLQLRSAALDNAAVNMYAKSGRVAAAREVFE 466

Query: 660 SM 661
           +M
Sbjct: 467 AM 468



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 15/284 (5%)

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD----EFVQSSLIDMYSKCGFKNLAY 453
           ++ + A  L AC  + +L  G +IH H++            V + LI+MY KCG    A 
Sbjct: 1   EASTYARLLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEAR 60

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNI 512
            +F  ++  ++V WN++I      G+   A+ +F  M L   +  D V+F +   AC   
Sbjct: 61  AVFASMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANAC--- 117

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G   + + +H  + + G   D+ I T+L  MYAKCG ++ A+ VFDSM+ERN VSW+AM+
Sbjct: 118 GSAREARIIHASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAML 177

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             Y  HG       LF+ ML  G++PN VT + ++ ACS    + +           GVE
Sbjct: 178 SGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLRQADE-------CGVE 230

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
            ++      +++ ++ GD++ A  +  SM    +   W  ++ G
Sbjct: 231 EEVAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAG 274


>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 704

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 190/650 (29%), Positives = 341/650 (52%), Gaps = 9/650 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRII----KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           ++++ C+++  L    ++H  I+       + +   +  +++  Y   G   DA+K+FD+
Sbjct: 9   ALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLFDR 68

Query: 156 MTSRDVVSWSSIIASYF-DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
           M  ++ +S++++IA+Y  D++  +   K+F  M  + + P+  T  SL + C  L     
Sbjct: 69  MPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDWFL 128

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
             ++HG VL+     D  +    + MYS CGDL SA + F    ++    W +MIS Y +
Sbjct: 129 GSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLK 188

Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
           +   +++L  F +M+         T    L +C+ LG+  +G+ +H Q+I   + P+   
Sbjct: 189 NDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPD-SA 247

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           L  AL++ Y  CG       +   I   +++SWN +IS +A+    ++A+ L V++    
Sbjct: 248 LQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMS 307

Query: 395 L-MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
              PD ++  + +SA G   +   G  +H  VIK   +   F+ ++L+ MY +      A
Sbjct: 308 TCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAA 367

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F  +++K VV+W  MI G  + G+   AI LF +M     + D      A+  C+++
Sbjct: 368 RGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADL 427

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L++G+ +H + +  G   +I +  +L DMYAK G+LQ AQ +F  +   ++  W++MI
Sbjct: 428 AILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMI 487

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             Y  HG   +A  LF ++L+ G+ P++VTF+++L AC+HSG VE+GKF ++ M+  G+ 
Sbjct: 488 GGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGIT 547

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMI-HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
           P  +HY+CMV LLSR+G ++ A ++I  S     +  +W  LL+ C   + + V     K
Sbjct: 548 PGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSSCVNRRNLTVGARAAK 607

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           ++      D+  Y LLSN+YA  G WD   ++R  +    L+K PG S I
Sbjct: 608 QVLRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGLMLEKDPGVSWI 657



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/603 (28%), Positives = 299/603 (49%), Gaps = 15/603 (2%)

Query: 3   LFRSCT---NLRKLTRLHAHLLVT----GLHYDPPASTRLIESYAEMGSLRSSRLVFDTF 55
           L + CT   +L+K  +LHA +L T         P  +  LI  YA  GS   ++ +FD  
Sbjct: 10  LIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLFDRM 69

Query: 56  KEPDSFMWAVLIKCYMWNNFFEE-SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
              ++  +  LI  Y  ++ +E  S  L+  M  ++   +   + S+L+ C  L D   G
Sbjct: 70  PRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDWFLG 129

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             +HG++++ G+  D  +QT +L  Y + G L+ A KVF     +D V W+S+I+ Y  N
Sbjct: 130 STLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLKN 189

Query: 175 ADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
             + E L +F  MVR G +   F   ++L  AC +L      R IH  V+   I  D  L
Sbjct: 190 DRIKESLSLFGEMVRSGTIFTQFTCSMAL-NACSKLGYYSQGRIIHAQVIVSNILPDSAL 248

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
            N+ + MY  CGD  +A   F +I+     SW +MIS + ++   +KA+  FVK+L +  
Sbjct: 249 QNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMST 308

Query: 294 -EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            +P+  T   ++ +         G+ +H Q+I+ G+     ++G AL+  Y     +   
Sbjct: 309 CKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSV-FIGNALLSMYFRNSDVEAA 367

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             V   + E++++ W  +I  + R G  + A++L  +M+  G   DSF+++ +LS C ++
Sbjct: 368 RGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADL 427

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             L+ G  +H   +K  C+ E  V  SL+DMY+K G    A L+F ++    +  WNSMI
Sbjct: 428 AILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMI 487

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G+  +G + EA+ LF ++    L  D+VTFL+ + AC++ G +EKGK++   +   G+ 
Sbjct: 488 GGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGIT 547

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVF--DSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
                 + +  + ++ G L  A+ +    + SE ++  W  ++        L   A   K
Sbjct: 548 PGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSSCVNRRNLTVGARAAK 607

Query: 590 QML 592
           Q+L
Sbjct: 608 QVL 610


>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 176/529 (33%), Positives = 296/529 (55%), Gaps = 7/529 (1%)

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +H   L+     +  + NS I MY K  D+ SA + F  +  R   +W ++I+ Y  +G+
Sbjct: 73  LHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGY 132

Query: 278 FQKALESF--VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
            ++ALE+   V +L +  +P L  L +V+  C      + G+ +H  ++      +  +L
Sbjct: 133 LEEALEALNDVYLLGLVPKPEL--LASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFL 190

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
             AL++FY  CG      +V   +  +N++SW  +IS         EA      MQ  G+
Sbjct: 191 STALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGV 250

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFK-NLAY 453
            P+  +  + LSAC   G ++ G +IHG+  +   +      S+L++MY +CG   +LA 
Sbjct: 251 CPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAE 310

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
           L+FE    + VV+W+S+I  F + G+S +A+ LF++M    +E + VT L  I AC+N+ 
Sbjct: 311 LIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLS 370

Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
            L+ G  +H  +  +G    I +  AL +MYAKCG L  ++++F  M  R+ V+WS++I 
Sbjct: 371 SLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLIS 430

Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
            YG+HG    A  +F +M + G+KP+ +TF+ +L AC+H+G V EG+  F  +R     P
Sbjct: 431 AYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIP 490

Query: 634 -DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
             ++HYAC+VDLL RSG +E A ++  +MP   +  IW +L++ C++H R+D+ + +  +
Sbjct: 491 LTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQ 550

Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           L  +  N+ G YTLL+ IYAE G+W +  +VR  M++  LKK  G+S I
Sbjct: 551 LIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRI 599



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 281/558 (50%), Gaps = 25/558 (4%)

Query: 67  IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
           IK ++    + +++ L+ ++     +  +F  PSV++A SS      G ++H   +K G 
Sbjct: 23  IKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGS 82

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             + V+  SI+  Y +F  +  AR+VFD M  RD ++W+S+I  Y  N  + E L+  + 
Sbjct: 83  HSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALND 142

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH-VLRRKIKIDGPLGNSFIVMYSKCG 245
           +   G+ P    + S+   CG     +  R IH   V+  +I     L  + +  Y +CG
Sbjct: 143 VYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCG 202

Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
           D L A R F  +E +   SWT MIS       + +A   F  M      PN +T I +L 
Sbjct: 203 DSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLS 262

Query: 306 SCAGLGWLREGKSVHCQIIRKGMG--PEYDYLGPALIEFYAECGK-MSECEKVIHAIGER 362
           +CA  G+++ GK +H    R G    P +     AL+  Y +CG+ M   E +      R
Sbjct: 263 ACAEPGFVKHGKEIHGYAFRHGFESCPSFS---SALVNMYCQCGEPMHLAELIFEGSSFR 319

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           +++ W+ +I  ++R+G S +AL+L  +M+T  + P+  ++ + +SAC N+ SL+ G  +H
Sbjct: 320 DVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLH 379

Query: 423 GHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
           G++ K   C    V ++LI+MY+KCG  N +  +F  +  +  V W+S+I  +  +G   
Sbjct: 380 GYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGE 439

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID---- 537
           +A+ +F++M    ++ D +TFL  + AC++ G + +G+ +  +     VR D  I     
Sbjct: 440 QALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQ-----VRADCEIPLTIE 494

Query: 538 --TALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMHGQLNDAASLFKQMLDS 594
               L D+  + G L+ A  +  +M  +     WS+++    +HG+L+ A  L  Q++ S
Sbjct: 495 HYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRS 554

Query: 595 GIKPNEV---TFMNILWA 609
             +PN     T +N ++A
Sbjct: 555 --EPNNAGNYTLLNTIYA 570



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 225/465 (48%), Gaps = 10/465 (2%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           T+LH   L TG H +   S  +I  Y +   + S+R VFDT    D   W  LI  Y+ N
Sbjct: 71  TQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHN 130

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            + EE++   + +          +  SV+  C        G ++H  ++        +  
Sbjct: 131 GYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFL 190

Query: 134 TSILCTYGEFGCLDD--ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           ++ L  +  F C D   A +VFD M  ++VVSW+++I+    + D  E    F +M  EG
Sbjct: 191 STALVDF-YFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEG 249

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS-A 250
           V P+ VT ++L  AC E   ++  + IHG+  R   +      ++ + MY +CG+ +  A
Sbjct: 250 VCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLA 309

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
           E  F     R    W+++I  ++R G   KAL+ F KM   + EPN +TL+ V+ +C  L
Sbjct: 310 ELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNL 369

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L+ G  +H  I + G       +G ALI  YA+CG ++   K+   +  R+ ++W+ L
Sbjct: 370 SSLKHGCGLHGYIFKFGFCFSIS-VGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSL 428

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
           IS Y   G  ++AL++  +M   G+ PD+ +  + LSAC + G +  G +I   V + DC
Sbjct: 429 ISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQV-RADC 487

Query: 431 KDEFV---QSSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMI 471
           +        + L+D+  + G    A  +   +  K S  +W+S++
Sbjct: 488 EIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLV 532



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 35/417 (8%)

Query: 32  STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
           ST L++ Y   G    +  VFD  +  +   W  +I   + +  ++E+   +  M  E  
Sbjct: 191 STALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGV 250

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDAR 150
             +     ++L AC+  G +  G+++HG   + GF+      ++++  Y + G  +  A 
Sbjct: 251 CPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAE 310

Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC 210
            +F+  + RDVV WSSII S+    D  + LK+F+ M  E +EP++VT+L++  AC  L 
Sbjct: 311 LIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLS 370

Query: 211 SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS 270
           SL+    +HG++ +        +GN+ I MY+KCG L  + + F+++  R   +W+++IS
Sbjct: 371 SLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLIS 430

Query: 271 CYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGP 330
            Y   G  ++AL+ F +M E   +P+ IT + VL +C   G + EG+ +  Q+       
Sbjct: 431 AYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQV------- 483

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
             D   P  IE YA                         L+    R G  + ALE+    
Sbjct: 484 RADCEIPLTIEHYA------------------------CLVDLLGRSGKLEYALEI---R 516

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
           +T  + P +   +S +SAC   G L +   +   +I+ +  +    + L  +Y++ G
Sbjct: 517 RTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSEPNNAGNYTLLNTIYAEHG 573



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 7/277 (2%)

Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK-GKWVHHKLI 526
           ++ I  F   G   + + LF +++L C       FL ++   S+  Q    G  +H   +
Sbjct: 20  SNQIKSFLSKGLYHQTLQLFSELHL-CGHSSISFFLPSVIKASSSAQCHTFGTQLHCLAL 78

Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
             G   +  +  ++  MY K  D+ +A++VFD+M  R+ ++W+++I+ Y  +G L +A  
Sbjct: 79  KTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALE 138

Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG--VEPDLQHYACMVDL 644
               +   G+ P      +++  C      + G+   +A+ +    +   +     +VD 
Sbjct: 139 ALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGR-QIHALVVVNERIGQSMFLSTALVDF 197

Query: 645 LSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYY 704
             R GD   A ++   M    N   W  +++GC  H+  D      + +   G   N   
Sbjct: 198 YFRCGDSLMALRVFDGMEV-KNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVT 256

Query: 705 TL-LSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
           ++ L +  AE G      ++       G +  P +S+
Sbjct: 257 SIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSS 293


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 177/621 (28%), Positives = 320/621 (51%), Gaps = 11/621 (1%)

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D  + +S++  Y   G L+ A  VF K+  + +V W+ +I++Y      +  + +FH +
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           ++EG+  D +  +S+  AC     L   R IH   +   + +   + ++ + MY +CG L
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 248 LSAERTFVKIEKRC-TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
             A   F  +E+      W AMI+  +++G  ++ALE F +ML++   P+L+T ++V  +
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 307 CAGLGWLREG--KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
           C+    LR    K  H  +   G+G +   +  AL+  YA CG++    +   A+ ERN 
Sbjct: 240 CSSSPSLRASQVKGFHTCLDETGLGSDV-VVATALVNAYARCGEIDCAREFFAAMPERNA 298

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SW  +I+ +A+ G    A+E    M   G++P   ++ ++L  C ++ + +L ++    
Sbjct: 299 VSWTSMIAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARL-VEAIAQ 356

Query: 425 VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS--VVMWNSMICGFYQNGNSLE 482
            I +   D  + + L+  Y++C  +  A  +F   ++      +  +MI  + Q  +   
Sbjct: 357 EIGV-ATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRS 415

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALT 541
              L+       +  D + ++TA+ AC+++  L +G+ +H  + +   + +D+ +  A+ 
Sbjct: 416 TFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIV 475

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
            MY +CG L+ A+  FD M  R+ +SW+AM+     HG++ D   LF+ ML  G     V
Sbjct: 476 SMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERV 535

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
            F+N+L AC+H+G VE G  +F+AM    GV P  +HY CMVDLL R G +  A  ++ +
Sbjct: 536 AFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQA 595

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MP P + + W AL+  CRI+   +  +   + +     N    Y  L NIY+  G W++ 
Sbjct: 596 MPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDA 655

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
             VR IM   GL+K+PG S+I
Sbjct: 656 AAVRKIMADLGLRKIPGVSSI 676



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 165/662 (24%), Positives = 298/662 (45%), Gaps = 51/662 (7%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           L R C ++ +   LH+ +  +     D   ++ L+  Y   GSL S+  VF         
Sbjct: 35  LVRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIV 94

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
           +W VLI  Y+       +I L+H++++E   +   ++ SVL ACSS   L +G  +H   
Sbjct: 95  LWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCA 154

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVSEG 180
           ++ G    +++ ++++  YG  G L DA  +F  +    DVV W+++I +   N    E 
Sbjct: 155 VEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREA 214

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA--RSIHGHVLRRKIKIDGPLGNSFI 238
           L++F+ M++ G+ PD VT +S+ +AC    SLR +  +  H  +    +  D  +  + +
Sbjct: 215 LEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALV 274

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
             Y++CG++  A   F  + +R   SWT+MI+ + + G    A+E+F  ML     P   
Sbjct: 275 NAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLLEGVVPTRS 333

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           TL   L  C  L   R  +++  +I   G+  +   +   L+  YA C    +  +V  A
Sbjct: 334 TLFAALEGCEDLHTARLVEAIAQEI---GVATDVAIVTD-LVMAYARCDGQEDAIRVFSA 389

Query: 359 I--GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
              GE +      +I+ YA+    +   +L       G+ PD     ++L AC ++ +L 
Sbjct: 390 REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALS 449

Query: 417 LGLQIHGHVI---KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
            G QIH  V    ++D +D  + ++++ MY +CG    A   F+ +  +  + WN+M+  
Sbjct: 450 EGRQIHACVAADRRLD-RDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSA 508

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             Q+G   +  +LF  M     + + V FL  + AC++ G +E G    H          
Sbjct: 509 SAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAG--CEH---------- 556

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
                  + M    G +   +             +  M+D  G  G+L DA  + + M  
Sbjct: 557 ------FSAMTGDHGVVPATEH------------YGCMVDLLGRKGRLADAHGIVQAM-- 596

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSGDIE 652
             + P+  T+M ++ AC   G  E G+  F A R+  +  +    Y  + ++ S +G  E
Sbjct: 597 -PVPPDAATWMALMGACRIYGDTERGR--FAAERVLELRANHTAAYVALCNIYSAAGRWE 653

Query: 653 GA 654
            A
Sbjct: 654 DA 655


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 185/573 (32%), Positives = 296/573 (51%), Gaps = 10/573 (1%)

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           + S   +  ++E  + F  M + GV     +   L EAC EL SL   R +H    R ++
Sbjct: 53  LVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHN---RMRM 109

Query: 228 KIDGP---LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALES 284
            I+ P   L N  + MY +CG L  A++ F ++      S T MIS Y   G   KA+  
Sbjct: 110 GIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGL 169

Query: 285 FVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
           F +MLE  ++P      T+L S      L  G+ +H  +IR G+      +   ++  Y 
Sbjct: 170 FSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNAS-IETGIVNMYV 228

Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
           +CG +   ++V   +  +  ++W  L+  Y + G +++AL+L V + T G+  DSF  + 
Sbjct: 229 KCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSV 288

Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
            L AC ++  L+ G QIH  V K+  + E  V + L+D Y KC     A   F+ I++ +
Sbjct: 289 VLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 348

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
            V W+++I G+ Q     EA+  F  +   N + ++  T+ +  QACS +     G  VH
Sbjct: 349 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVH 408

Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
              I   +    Y ++AL  MY+KCG L  A  VF+SM   ++V+W+A I  +  +G  +
Sbjct: 409 ADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNAS 468

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
           +A  LF++M+  G+KPN VTF+ +L ACSH+G VE+GK Y + M R + V P + HY CM
Sbjct: 469 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCM 528

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           +D+ +RSG ++ A + + +MPF  +   W   L+GC  HK +++ K   +EL      D 
Sbjct: 529 IDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDT 588

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             Y L  N+Y   G W+E  +V  +M    LKK
Sbjct: 589 AGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKK 621



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 258/511 (50%), Gaps = 7/511 (1%)

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-IQT 134
             E+   + +M +   ++S + Y  +  AC  L  L  G  +H R ++ G +   V +Q 
Sbjct: 62  LNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNR-MRMGIENPSVLLQN 120

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
            +L  Y E G L+DA K+FD+M+  + VS +++I++Y +   + + + +F  M+  G +P
Sbjct: 121 CVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKP 180

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
                 +L ++     +L   R IH HV+R  +  +  +    + MY KCG L+ A+R F
Sbjct: 181 PSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVF 240

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            ++  +   +WT ++  Y ++G  + AL+ FV ++    E +      VL +CA L  LR
Sbjct: 241 DQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELR 300

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
            GK +H  + + G+  E   +G  L++FY +C       +    I E N +SW+ +IS Y
Sbjct: 301 FGKQIHACVAKLGLECEVS-VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY 359

Query: 375 ARKGMSKEALELLVQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKD 432
            +    +EA++    +++   ++ +SF+  S   AC  +    +G Q+H   IK      
Sbjct: 360 CQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGS 419

Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
           ++ +S+LI MYSKCG  + A+ +FE +    +V W + I G    GN+ EA+ LF +M  
Sbjct: 420 QYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 479

Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGK-WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
             ++ + VTF+  + ACS+ G +E+GK ++   L  Y V   I     + D+YA+ G L 
Sbjct: 480 CGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 539

Query: 552 TAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
            A R   +M  E + +SW   +     H  L
Sbjct: 540 EALRFMKNMPFEPDAMSWKCFLSGCWTHKNL 570



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 237/493 (48%), Gaps = 26/493 (5%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIES-----YAEMGSLRSSRLVFDTFKE 57
           LF +C  LR L+  H  LL   +       + L+++     Y E GSL  +  +FD   +
Sbjct: 87  LFEACRELRSLS--HGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSD 144

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            ++     +I  Y      ++++ L+ +M+       + +Y ++L++  +   L  G ++
Sbjct: 145 LNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQI 204

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  +I+ G   +  I+T I+  Y + G L  A++VFD+M  +  V+W+ ++  Y      
Sbjct: 205 HAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRA 264

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + LK+F  ++ EGVE D      + +AC  L  LR  + IH  V +  ++ +  +G   
Sbjct: 265 RDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPL 324

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP-- 295
           +  Y KC    SA R F +I +    SW+A+IS Y +   F++A+++F K L  K     
Sbjct: 325 VDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF-KSLRSKNAVVL 383

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGM-GPEYDYLGPALIEFYAECGKMSECEK 354
           N  T  ++  +C+ L     G  VH   I++ + G +Y     ALI  Y++CG + +  +
Sbjct: 384 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG--ESALITMYSKCGCLDDAHE 441

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V  ++   +I++W   IS +A  G + EAL L  +M + G+ P+S +  + L+AC + G 
Sbjct: 442 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 501

Query: 415 LQLG-------LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVM 466
           ++ G       L+ +     ID  D      +ID+Y++ G  + A    + +  +   + 
Sbjct: 502 VEQGKHYLDTMLRKYNVAPTIDHYD-----CMIDIYARSGLLDEALRFMKNMPFEPDAMS 556

Query: 467 WNSMICGFYQNGN 479
           W   + G + + N
Sbjct: 557 WKCFLSGCWTHKN 569



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 79/163 (48%)

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           +I  K   + N  +    ++G   EA   F +M    + +   ++    +AC  +  L  
Sbjct: 40  KISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSH 99

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ +H+++        + +   +  MY +CG L+ A ++FD MS+ N VS + MI  Y  
Sbjct: 100 GRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAE 159

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
            G L+ A  LF +ML+SG KP    +  +L +  +  +++ G+
Sbjct: 160 QGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGR 202


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 172/547 (31%), Positives = 286/547 (52%), Gaps = 38/547 (6%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T+  L +       +R  R++H  ++   ++ +  LG   +  Y+   D+ SA + F +I
Sbjct: 41  TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +R       MI  Y  +G++ + ++ F  M      P+  T   VL +C+  G +  G+
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGR 160

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H    + G+     ++G  L+  Y +CG +SE   V+  +  R+++SWN L+  YA+ 
Sbjct: 161 KIHGSATKVGLSSTL-FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS 437
               +ALE+  +M++  +  D+ ++AS L A  N  +                       
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT----------------------- 256

Query: 438 SLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
                      +N+ Y+  +F ++ +KS+V WN MI  + +N   +EA+ L+ +M  +  
Sbjct: 257 -----------ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           E D V+  + + AC +   L  GK +H  +    +  ++ ++ AL DMYAKCG L+ A+ 
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VF++M  R+VVSW+AMI  YG  G+  DA +LF ++ DSG+ P+ + F+  L ACSH+G 
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425

Query: 616 VEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           +EEG+  F  M   + + P L+H ACMVDLL R+G ++ A++ I  M    N  +WGALL
Sbjct: 426 LEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CR+H   D+      +L       +GYY LLSNIYA+ G W+E   +R+IM+  GLKK
Sbjct: 486 GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545

Query: 735 VPGYSTI 741
            PG S +
Sbjct: 546 NPGASNV 552



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 203/460 (44%), Gaps = 73/460 (15%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           ++R L  +H+ +++  L  +     +L+ +YA +  + S+R VFD   E +  +  V+I+
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK----- 123
            Y+ N F+ E + ++  M        ++ +P VL+ACS  G +  G K+HG   K     
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173

Query: 124 --------------CGF-----------DKDDVIQ-TSILCTYGEFGCLDDARKV----- 152
                         CGF            + DV+   S++  Y +    DDA +V     
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 153 --------------------------------FDKMTSRDVVSWSSIIASYFDNADVSEG 180
                                           F KM  + +VSW+ +I  Y  NA   E 
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++++  M  +G EPD V++ S+  ACG+  +L   + IHG++ R+K+  +  L N+ I M
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L  A   F  ++ R   SWTAMIS Y  SG    A+  F K+ +    P+ I  
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413

Query: 301 ITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +T L +C+  G L EG+S          + P  ++L   +++     GK+ E  + I  +
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA-CMVDLLGRAGKVKEAYRFIQDM 472

Query: 360 G-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
             E N   W  L+   A +  S   + LL   + + L P+
Sbjct: 473 SMEPNERVWGALLG--ACRVHSDTDIGLLAADKLFQLAPE 510



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 8/214 (3%)

Query: 495 LEMD-----EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           LE+D     E  FL   Q       +   + VH ++I   +R +  +   L   YA   D
Sbjct: 31  LELDQKSPQETVFLLG-QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKD 89

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           + +A++VFD + ERNV+  + MI  Y  +G   +   +F  M    ++P+  TF  +L A
Sbjct: 90  VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           CS SG++  G+    +    G+   L     +V +  + G +  A  ++  M      S 
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS- 208

Query: 670 WGALLNGCRIHKRIDVMKTIEKEL-SVTGTNDNG 702
           W +L+ G   ++R D    + +E+ SV  ++D G
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 192/629 (30%), Positives = 326/629 (51%), Gaps = 6/629 (0%)

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H   +K G   D     +IL  Y +   L  A  +FD+M  RD VSW+++IA + +  ++
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
                +   M   G E D  T  S+ +           + +H  +++     +   G++ 
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY+KC  L  A  +F+ I K  T SW AMI+ Y ++G  + A      M +  E+ + 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
            T   +L       +      +H +II+ G+    + +  ALI  Y++CG + + +++  
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGL-ELVNTMCNALITSYSKCGSLDDAKRIFD 259

Query: 358 A-IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           +  G R++++WN L++ Y  +     A +LL+ MQ  G  PD +S  S +SAC N     
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL--AYLLFERIQQKSVVMWNSMICG 473
            G  +HG VIK   +    + ++LI MY K  + ++  A  +FE ++ K  V WNS++ G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             Q G+S +A+  F  M    +++D  +F   +++CS++   + G+ +H   + YG+  +
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESN 439

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            ++ ++L  MY+KCG ++ A+R F+  S+ + ++W+A++  Y  HGQ N A  LF  M  
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEX 499

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIE 652
             +K + +TF+ +L ACSH G VE+G  +   M   +GV P ++HYAC VDL  RSG +E
Sbjct: 500 KKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLE 559

Query: 653 GAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
            A  +I  MPF  + ++W   L  CR    I++   +   L      ++  Y LLSN+Y 
Sbjct: 560 EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYG 619

Query: 713 EEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
               WDE  KV+ +M+  G+KKVPG+S I
Sbjct: 620 NLMRWDEKAKVKRLMKERGVKKVPGWSWI 648



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 296/611 (48%), Gaps = 18/611 (2%)

Query: 2   PLFRSCTNLRKLTRL---HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           PL    T+ R L  L   H+  +  G   D      ++  Y +   LRS+ ++FD     
Sbjct: 3   PLSAVGTSFRALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMR 62

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           DS  W  +I  ++     E S  +   M      +  + + S+L+  +  G    G++VH
Sbjct: 63  DSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVH 122

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
             IIK G+ ++    +++L  Y +   L+DA   F  ++  + VSW+++I  Y    D  
Sbjct: 123 SIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRE 182

Query: 179 EGLKMFHSMVREGVEPD---FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
               +   M +EG + D   +  +L L +   + C+L     +HG +++  +++   + N
Sbjct: 183 TAFWLLDCMEQEGEKVDDGTYAPLLPLLDD-ADFCNL--TSQLHGKIIKHGLELVNTMCN 239

Query: 236 SFIVMYSKCGDLLSAERTFVKIEK-RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
           + I  YSKCG L  A+R F      R   +W ++++ Y        A +  + M E   E
Sbjct: 240 ALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFE 299

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY--AECGKMSEC 352
           P+L +  +++ +C        G+S+H  +I++G       +  ALI  Y  ++ G M E 
Sbjct: 300 PDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVP-ISNALISMYLKSDYGSMKEA 358

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
             +  ++  ++ +SWN +++  ++ G S++A++  + M++  +  D +S ++ L +C ++
Sbjct: 359 LCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDL 418

Query: 413 GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
            + QLG QIH   +K   + +EFV SSLI MYSKCG    A   FE   + S + WN+++
Sbjct: 419 ATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALM 478

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGV 530
            G+ Q+G    A++LF  M    ++MD +TF+  + ACS+IG +E+G K++      YGV
Sbjct: 479 FGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGV 538

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFK 589
              +       D+Y + G L+ A+ + + M  + +   W   +      G +  A  +  
Sbjct: 539 PPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAG 598

Query: 590 QMLDSGIKPNE 600
            +L+  ++P E
Sbjct: 599 HLLE--MEPEE 607



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 205/446 (45%), Gaps = 37/446 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE-PD 59
           +PL          ++LH  ++  GL         LI SY++ GSL  ++ +FD+     D
Sbjct: 207 LPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRD 266

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W  L+  Y+  +  + +  L   M         + Y S++ AC +     +G  +HG
Sbjct: 267 LVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHG 326

Query: 120 RIIKCGFDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
            +IK GF++   I  +++  Y   ++G + +A  +F+ +  +D VSW+SI+         
Sbjct: 327 LVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSS 386

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + +K F  M    ++ D  +  ++  +C +L + +  + IH   L+  ++ +  + +S 
Sbjct: 387 EDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSL 446

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           I MYSKCG +  A R+F +  K  + +W A++  Y + G    AL+ F  M   K + + 
Sbjct: 447 IFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDH 506

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
           IT + VL +C+ +G + +G    C+ +R     E DY  P  +E YA C           
Sbjct: 507 ITFVAVLTACSHIGLVEQG----CKFLR---CMESDYGVPPRMEHYA-CA---------- 548

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
                        +  Y R G  +EA  L+ +M      PD+    + L AC + G+++L
Sbjct: 549 -------------VDLYGRSGRLEEAKALIEEMP---FKPDTTVWKTFLGACRSCGNIEL 592

Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMY 443
             Q+ GH+++++ ++      L +MY
Sbjct: 593 ACQVAGHLLEMEPEEHCTYVLLSNMY 618


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/485 (35%), Positives = 274/485 (56%), Gaps = 25/485 (5%)

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           AL ++  M ++  E +   + +VL +C+ +   R GK +H   ++ G+  +  ++  AL+
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDV-FVVNALM 151

Query: 341 EFYAECG----------KMSECEKV------------IHAIGERNILSWNMLISEYARKG 378
           + Y+ECG          KMSE + V             +   +R+I+SW  +I+ Y R  
Sbjct: 152 QMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCN 211

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQS 437
             +E   L V+M    + P+  ++ S + +CG VG++QLG ++H ++++        + +
Sbjct: 212 DLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALAT 271

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
           +L+DMY KCG    A  +F+ ++ K V+ W +MI  + Q      A  LF QM  N +  
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           +E+T ++ +  C+  G L+ GKW H  +   GV  D+ + TAL DMYAKCGD+  AQR+F
Sbjct: 332 NELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
               +R++ +W+ M+  YGMHG    A  LF +M   G+KPN++TF+  L ACSH+G V 
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451

Query: 618 EGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EGK  F  M   FG+ P ++HY CMVDLL R+G ++ A+KMI SMP   N +IWGA+L  
Sbjct: 452 EGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           C+IHK  ++ +   +EL      + GY  L+SNIYA    W++   +R  ++ TG+KK P
Sbjct: 512 CKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEP 571

Query: 737 GYSTI 741
           G S+I
Sbjct: 572 GMSSI 576



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 226/430 (52%), Gaps = 40/430 (9%)

Query: 83  YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
           Y  M +    + +FI PSVL+ACS +     G+++HG  +K G   D  +  +++  Y E
Sbjct: 97  YTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSE 156

Query: 143 FGCLDDARKVFDKMTSRDVVSWSS----------------------IIASYFDNADVSEG 180
            G L  AR +FDKM+ RDVVSWS+                      +IA Y    D+ EG
Sbjct: 157 CGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEG 216

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            ++F  M+ E V P+ +TMLSL  +CG + +++  + +H ++LR    +   L  + + M
Sbjct: 217 ERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDM 276

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG++ SA   F  ++ +   +WTAMIS Y ++     A + FV+M +    PN +T+
Sbjct: 277 YGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTM 336

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAI 359
           +++L  CA  G L  GK  H  I ++G+  E D  L  ALI+ YA+CG +S  +++    
Sbjct: 337 VSLLSLCAVNGALDMGKWFHAYIDKQGV--EVDVILKTALIDMYAKCGDISGAQRLFSEA 394

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG- 418
            +R+I +WN++++ Y   G  ++AL+L  +M+T G+ P+  +   +L AC + G +  G 
Sbjct: 395 IDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGK 454

Query: 419 ----LQIH--GHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI 471
                 IH  G V K++         ++D+  + G  + AY + E +    ++ +W +M+
Sbjct: 455 GLFEKMIHDFGLVPKVEH-----YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509

Query: 472 --CGFYQNGN 479
             C  ++N N
Sbjct: 510 AACKIHKNSN 519



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 233/463 (50%), Gaps = 27/463 (5%)

Query: 145 CLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAE 204
           CLD  +++   +T         +  S F+ +     L  +  M +  +E D   + S+ +
Sbjct: 59  CLDQTQQLHAHITRTHFNHAQQVSFSPFE-SHPRYALNTYTYMRKLDIEVDSFIIPSVLK 117

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI------- 257
           AC ++   R  + IHG  ++  +  D  + N+ + MYS+CG L+SA   F K+       
Sbjct: 118 ACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVS 177

Query: 258 ---------------EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
                           +R   SWTAMI+ Y R    ++    FV+M+E    PN IT+++
Sbjct: 178 WSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLS 237

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           ++ SC  +G ++ GK +H  I+R G G     L  AL++ Y +CG++     +  ++  +
Sbjct: 238 LIISCGFVGAVQLGKRLHAYILRNGFGMSLA-LATALVDMYGKCGEIRSARAIFDSMKNK 296

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
           ++++W  +IS YA+      A +L VQM+  G+ P+  ++ S LS C   G+L +G   H
Sbjct: 297 DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFH 356

Query: 423 GHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
            ++ K   + D  ++++LIDMY+KCG  + A  LF     + +  WN M+ G+  +G   
Sbjct: 357 AYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGE 416

Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTAL 540
           +A+ LF +M    ++ +++TF+ A+ ACS+ G + +GK +  K+I  +G+   +     +
Sbjct: 417 KALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCM 476

Query: 541 TDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLN 582
            D+  + G L  A ++ +SM    N+  W AM+    +H   N
Sbjct: 477 VDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSN 519



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 203/397 (51%), Gaps = 28/397 (7%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + ++C+ +   R    +H   +  GL  D      L++ Y+E GSL S+RL+FD   E D
Sbjct: 115 VLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERD 174

Query: 60  SFMWAVLIKCYM-------------WN---------NFFEESILLYHKMIREQATISNFI 97
              W+ +I+ Y+             W          N  EE   L+ +MI E    ++  
Sbjct: 175 VVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDIT 234

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
             S++ +C  +G +  G+++H  I++ GF     + T+++  YG+ G +  AR +FD M 
Sbjct: 235 MLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMK 294

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           ++DV++W+++I++Y     +    ++F  M   GV P+ +TM+SL   C    +L   + 
Sbjct: 295 NKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKW 354

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
            H ++ ++ +++D  L  + I MY+KCGD+  A+R F +   R   +W  M++ Y   G+
Sbjct: 355 FHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGY 414

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLG 336
            +KAL+ F +M  +  +PN IT I  L +C+  G + EGK +  ++I   G+ P+ ++ G
Sbjct: 415 GEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYG 474

Query: 337 PALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLIS 372
             +++     G + E  K+I ++    NI  W  +++
Sbjct: 475 -CMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 179/571 (31%), Positives = 300/571 (52%), Gaps = 45/571 (7%)

Query: 180 GLKMFHSMVREGVEPDFV--TMLSLAEACGELCSLRP----ARSIHGHV-LRRKIKIDGP 232
            +K   ++V    +P F    ++     CG++    P     + +H  + +   +  +  
Sbjct: 13  AVKQLQTLVLSIQKPKFTQQNVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPS 72

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           LG   +  Y+ CG+  S    F +I K+    +  MI  Y  +  +  AL  F  M    
Sbjct: 73  LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 132

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            +P+  T   VL + +G   L  G  +H  ++R G+     ++G  LI  Y +CG + E 
Sbjct: 133 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNV-FVGNGLISMYGKCGCLVEA 191

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            +V+  +  R+++SWN L++  AR G   +ALE+  +M+  GL PD+ ++AS L A  N 
Sbjct: 192 CRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT 251

Query: 413 GSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL--LFERIQQKSVVMWNSM 470
                            C D                 N++++  +F ++  KS+V WN M
Sbjct: 252 -----------------CLD-----------------NVSFVKEMFMKLANKSLVSWNVM 277

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           I  +  N    EA+++F QM  + ++ D ++  + + AC ++  L  G+ +H  ++   +
Sbjct: 278 IAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRL 337

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
           + ++ ++ AL DMYAKCG L+ A+ VFD M  R+VVSW++MI  YGM+G+  DA SLF +
Sbjct: 338 QPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSR 397

Query: 591 MLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
           M D G+ P+ + F+++L ACSH+G ++EG++YF  M     + P ++H+ CMVDLL R+G
Sbjct: 398 MQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAG 457

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
            ++ A+  I  MP   N  +WGALL+ CR++  + +      +L       +GYY LLSN
Sbjct: 458 QVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSN 517

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
           IYA+ G W++   VRSIM+  G+KK+PG S 
Sbjct: 518 IYAKAGRWEDVTTVRSIMKTKGIKKMPGVSN 548



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 241/479 (50%), Gaps = 48/479 (10%)

Query: 9   NLRKLTRLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           +++ L +LH+ + +   LH +P    +L+ +YA  G   S+R +FD   + +   + V+I
Sbjct: 50  DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 109

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
           + Y+ N+ + +++L++  M        ++ YP VL+A S   DL  G ++H  +++ G D
Sbjct: 110 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 169

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
            +  +   ++  YG+ GCL +A +V D+M  RDVVSW+S++A    N    + L++   M
Sbjct: 170 LNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 229

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN-SFIVMYSKCGD 246
              G++PD  TM SL  A    C                      L N SF+        
Sbjct: 230 ELLGLKPDAGTMASLLPAVTNTC----------------------LDNVSFV-------- 259

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
               +  F+K+  +   SW  MI+ Y  +    +A++ F++M +   +P+ I++ +VL +
Sbjct: 260 ----KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPA 315

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C  L  L  G+ +H  ++RK + P    L  ALI+ YA+CG +    +V   +  R+++S
Sbjct: 316 CGDLSALLLGRRIHEYVVRKRLQPNL-LLENALIDMYAKCGCLEYAREVFDQMKFRDVVS 374

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           W  +IS Y   G  ++A+ L  +MQ  GL PDS +  S LSAC + G L  G + +  ++
Sbjct: 375 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEG-RYYFKLM 433

Query: 427 KIDCK-----DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
             +CK     + FV   ++D+  + G  + AY   +++  + +  +W +++  C  Y N
Sbjct: 434 TEECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 490



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 178/394 (45%), Gaps = 54/394 (13%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++HA ++  GL  +      LI  Y + G L  +  V D     D   W  L+     N 
Sbjct: 158 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNG 217

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            F+++                      L  C  +  LG               K D    
Sbjct: 218 QFDDA----------------------LEVCKEMELLGL--------------KPDAGTM 241

Query: 135 SILCTYGEFGCLDDA---RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           + L       CLD+    +++F K+ ++ +VSW+ +IA Y +N+  +E + +F  M    
Sbjct: 242 ASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 301

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
           V+PD +++ S+  ACG+L +L   R IH +V+R++++ +  L N+ I MY+KCG L  A 
Sbjct: 302 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 361

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
             F +++ R   SWT+MIS Y  +G  + A+  F +M ++   P+ I  ++VL +C+  G
Sbjct: 362 EVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAG 421

Query: 312 WLREGK------SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNI 364
            L EG+      +  C+I+     P  ++    +++     G++ E    I  +  E N 
Sbjct: 422 LLDEGRYYFKLMTEECKIV-----PRIEHF-VCMVDLLGRAGQVDEAYGFIKQMPMEPNE 475

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
             W  L+S  A +  S   + LL   Q + L P+
Sbjct: 476 RVWGALLS--ACRVYSNMIIGLLAADQLFQLCPE 507


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 173/545 (31%), Positives = 285/545 (52%), Gaps = 34/545 (6%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T+  L +       +R  R++H  ++   ++ +  LG   +  Y+   D+ SA + F +I
Sbjct: 41  TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +R       MI  Y  +G++ + ++ F  M      P+  T   VL +C+  G +  G+
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGR 160

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H    + G+     ++G  L+  Y +CG +SE   V+  +  R+++SWN L+  YA+ 
Sbjct: 161 KIHGSATKVGLSSTL-FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS 437
               +ALE+  +M++  +  D+ ++AS L A  N  +  +                    
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-------------------- 259

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
               MY K         +F ++ +KS+V WN MI  + +N   +EA+ L+ +M  +  E 
Sbjct: 260 ----MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           D V+  + + AC +   L  GK +H  +    +  ++ ++ AL DMYAKCG L+ A+ VF
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           ++M  R+VVSW+AMI  YG  G+  DA +LF ++ DSG+ P+ + F+  L ACSH+G +E
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           EG+  F  M   + + P L+H ACMVDLL R+G ++ A++ I  M    N  +WGALL  
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+H   D+      +L       +GYY LLSNIYA+ G W+E   +R+IM+  GLKK P
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 547

Query: 737 GYSTI 741
           G S +
Sbjct: 548 GASNV 552



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 203/460 (44%), Gaps = 73/460 (15%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           ++R L  +H+ +++  L  +     +L+ +YA +  + S+R VFD   E +  +  V+I+
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK----- 123
            Y+ N F+ E + ++  M        ++ +P VL+ACS  G +  G K+HG   K     
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173

Query: 124 --------------CGF-----------DKDDVIQ-TSILCTYGEFGCLDDARKV----- 152
                         CGF            + DV+   S++  Y +    DDA +V     
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 153 --------------------------------FDKMTSRDVVSWSSIIASYFDNADVSEG 180
                                           F KM  + +VSW+ +I  Y  NA   E 
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           ++++  M  +G EPD V++ S+  ACG+  +L   + IHG++ R+K+  +  L N+ I M
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y+KCG L  A   F  ++ R   SWTAMIS Y  SG    A+  F K+ +    P+ I  
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413

Query: 301 ITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           +T L +C+  G L EG+S          + P  ++L   +++     GK+ E  + I  +
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA-CMVDLLGRAGKVKEAYRFIQDM 472

Query: 360 G-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
             E N   W  L+   A +  S   + LL   + + L P+
Sbjct: 473 SMEPNERVWGALLG--ACRVHSDTDIGLLAADKLFQLAPE 510



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 8/217 (3%)

Query: 492 LNCLEMD-----EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           L  LE+D     E  FL   Q       +   + VH ++I   +R +  +   L   YA 
Sbjct: 28  LPKLELDQKSPQETVFLLG-QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYAS 86

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
             D+ +A++VFD + ERNV+  + MI  Y  +G   +   +F  M    ++P+  TF  +
Sbjct: 87  LKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCV 146

Query: 607 LWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN 666
           L ACS SG++  G+    +    G+   L     +V +  + G +  A  ++  M     
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206

Query: 667 GSIWGALLNGCRIHKRIDVMKTIEKEL-SVTGTNDNG 702
            S W +L+ G   ++R D    + +E+ SV  ++D G
Sbjct: 207 VS-WNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242


>gi|110739166|dbj|BAF01499.1| hypothetical protein [Arabidopsis thaliana]
          Length = 741

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 206/686 (30%), Positives = 336/686 (48%), Gaps = 59/686 (8%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY--------MWNNFFEESILLYHKM 86
           +I  Y ++G +  +  VFD   E +   +  +IK Y         W  F E   + Y   
Sbjct: 55  IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE---MRYFGY 111

Query: 87  IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGC 145
           +  Q+T+S  +      +C+SL D+ +G ++HG  +K G F  D  + T +LC YG    
Sbjct: 112 LPNQSTVSGLL------SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L+ A +VF+ M  + + +W+ +++       + E +  F  +VR G      + L + + 
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
              +  L  ++ +H    ++ +  +  + NS I  Y KCG+   AER F         SW
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284

Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
            A+I    +S    KAL+ FV M E    PN  T ++VLG  + +  L  G+ +H  +I+
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344

Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
            G       LG ALI+FYA+CG + +       I ++NI+ WN L+S YA K      L 
Sbjct: 345 NGCETGI-VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLS 402

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYS 444
           L +QM   G  P  ++ +++L +C  V  LQ   Q+H  ++++  +D ++V SSL+  Y+
Sbjct: 403 LFLQMLQMGFRPTEYTFSTALKSCC-VTELQ---QLHSVIVRMGYEDNDYVLSSLMRSYA 458

Query: 445 KCGFKNLAYLLFE--------------------------------RIQQKSVVMWNSMIC 472
           K    N A LL +                                 ++Q   V WN  I 
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR- 531
              ++    E I LF  M  + +  D+ TF++ +  CS +  L  G  +H  +       
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC 578

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
            D ++   L DMY KCG +++  +VF+   E+N+++W+A+I C G+HG   +A   FK+ 
Sbjct: 579 ADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKET 638

Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
           L  G KP+ V+F++IL AC H G V+EG   F  M+ +GVEP + HY C VDLL+R+G +
Sbjct: 639 LSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPGMDHYRCAVDLLARNGYL 698

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGC 677
           + A  +I  MPFPA+  +W   L+GC
Sbjct: 699 KEAEHLIREMPFPADAPVWRTFLDGC 724



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 276/607 (45%), Gaps = 46/607 (7%)

Query: 6   SCTNL--RKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC +L  R  T+LH   L  GL   D    T L+  Y  +  L  +  VF+         
Sbjct: 123 SCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET 182

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W  ++       F +E +  + +++R  A+++   +  VL+  S + DL   +++H    
Sbjct: 183 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSAT 242

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G D +  +  S++  YG+ G    A ++F    S D+VSW++II +   + +  + LK
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALK 302

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F SM   G  P+  T +S+      +  L   R IHG +++   +    LGN+ I  Y+
Sbjct: 303 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA 362

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCY-NRSGWFQKALESFVKMLEVKEEPNLITLI 301
           KCG+L  +   F  I  +    W A++S Y N+ G     L  F++ML++   P   T  
Sbjct: 363 KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFS 420

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC--------------- 346
           T L SC     + E + +H  I+R G   + DY+  +L+  YA+                
Sbjct: 421 TALKSCC----VTELQQLHSVIVRMGY-EDNDYVLSSLMRSYAKNQLMNDALLLLDWASG 475

Query: 347 -----------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
                            G+  E  K+I  + + + +SWN+ I+  +R    +E +EL   
Sbjct: 476 PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKH 535

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCG 447
           M    + PD ++  S LS C  +  L LG  IHG + K D  C D FV + LIDMY KCG
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595

Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
                  +FE  ++K+++ W ++I     +G   EA+  F +      + D V+F++ + 
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655

Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVV 566
           AC + G +++G  +  K+  YGV   +       D+ A+ G L+ A+ +   M    +  
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPGMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAP 715

Query: 567 SWSAMID 573
            W   +D
Sbjct: 716 VWRTFLD 722



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 274/622 (44%), Gaps = 54/622 (8%)

Query: 100 SVLRACSSLGDLGSGEKVHG-RIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMT 157
           S+L  C         + +H   I  C      V +  +I+  Y + G +  A KVFD+M 
Sbjct: 17  SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+ VS+++II  Y    DV +   +F  M   G  P+  T+  L  +C  L  +R    
Sbjct: 77  ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQ 134

Query: 218 IHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           +HG  L+  + + D  +G   + +Y +   L  AE+ F  +  +   +W  M+S     G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
           + ++ +  F +++ +       + + VL   + +  L   K +HC   +KG+  E   + 
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +LI  Y +CG     E++    G  +I+SWN +I   A+     +AL+L V M   G  
Sbjct: 255 -SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKCGFKNLAYLL 455
           P+  +  S L     V  L  G QIHG +IK  C+   V  ++LID Y+KCG    + L 
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373

Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQL 515
           F+ I+ K++V WN+++ G Y N +    ++LF QM        E TF TA+++C  + +L
Sbjct: 374 FDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VTEL 431

Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKC---------------------------- 547
           ++   +H  ++  G   + Y+ ++L   YAK                             
Sbjct: 432 QQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488

Query: 548 ----GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
               G    + ++  ++ + + VSW+  I          +   LFK ML S I+P++ TF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548

Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDL---QHYAC--MVDLLSRSGDIEGAFKMI 658
           ++IL  CS    +  G    +++     + D      + C  ++D+  + G I    K+ 
Sbjct: 549 VSILSLCSKLCDLTLG----SSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVF 604

Query: 659 HSMPFPANGSIWGALLNGCRIH 680
                  N   W AL++   IH
Sbjct: 605 EETR-EKNLITWTALISCLGIH 625


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 168/496 (33%), Positives = 285/496 (57%), Gaps = 12/496 (2%)

Query: 257  IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
            ++K    SW ++I+   R G   +AL +F  + ++   P   +    + SC+ L  L  G
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 2034

Query: 317  KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
            +  H Q    G   +  ++  ALI+ Y++CG++ +   +   I  RN++SW  +I+ Y +
Sbjct: 2035 RMSHQQAFVFGFETDL-FVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 2093

Query: 377  KGMSKEALELL-------VQMQTWGLMP-DSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
               +  AL L         +++    +P DS  + S LSAC  V    +   +HG V+K 
Sbjct: 2094 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 2153

Query: 429  DCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
                   V ++L+D Y+KCG   ++  +F+ +++K  + WNSMI  + Q+G S EA+ +F
Sbjct: 2154 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 2213

Query: 488  HQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
            H M  +  +  + VT    + AC++ G L  GK +H ++I   +  ++ + T++ DMY K
Sbjct: 2214 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 2273

Query: 547  CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
            CG ++ A++ FD M E+NV SW+AM+  YGMHG+  +A  +F +M+ +G+KPN +TF+++
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 2333

Query: 607  LWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
            L ACSH+G VEEG  +FNAM+  + +EP ++HY CMVDL  R+G +  A+ +I  M    
Sbjct: 2334 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 2393

Query: 666  NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
            +  +WG+LL  CRIHK +D+ +   ++L     ++ GYY LLSN+YA+ G W +  ++R 
Sbjct: 2394 DFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRM 2453

Query: 726  IMEVTGLKKVPGYSTI 741
            +M+   L K PG+S +
Sbjct: 2454 LMKNRQLVKPPGFSLV 2469



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 203/387 (52%), Gaps = 37/387 (9%)

Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
           +L +C     LR+   +H +IIR G+  +   L   LI  Y+  G+++    + + I   
Sbjct: 33  LLQNCKNFKHLRQ---IHAKIIRSGLSND-QLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
              +WN++I      G+S++AL L   M   G+  D F+    + AC N  S+ LG  +H
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148

Query: 423 GHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFER----------------------- 458
           G +IK     D FVQ++LID Y KCG    A  +FE+                       
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208

Query: 459 --------IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
                   I  K+VV W +MI G+ +N    EA+ LF +M    +  +E T ++ I+AC+
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
            +G L  G+ +H   I   +   +Y+ TAL DMY+KCG ++ A  VF++M  +++ +W++
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
           MI   G+HG   +A +LF +M    +KP+ +TF+ +L AC H  +V+EG  YF  M + +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFK 656
           G+ P  +HY CM +L +RS +++ AFK
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 262/508 (51%), Gaps = 52/508 (10%)

Query: 160  DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
            +V SW+S+IA      D  E L+ F S+ + G+ P   +     ++C  LC L   R  H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038

Query: 220  GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
                    + D  + ++ I MYSKCG L  A   F +I  R   SWT+MI+ Y ++    
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098

Query: 280  KALESFVKMLEVKEEP--------NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
             AL  F   LE + E         + + +++VL +C+ +      + VH  +++KG    
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158

Query: 332  YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM- 390
               +G  L++ YA+CG+    +KV   + E++ +SWN +I+ YA+ G+S EALE+   M 
Sbjct: 2159 IG-VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 2217

Query: 391  QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
            +  G+  ++ ++++ L AC + G+L+ G  IH  VIK+D + +  V +S+IDMY KCG  
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 2277

Query: 450  NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
             +A   F+R+++K+V  W +M+ G+  +G + EA+++F++M    ++ + +TF++ + AC
Sbjct: 2278 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337

Query: 510  SNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
            S+ G +E+G  W +     Y +                               E  +  +
Sbjct: 2338 SHAGLVEEGWHWFNAMKHKYDI-------------------------------EPGIEHY 2366

Query: 569  SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI 628
              M+D +G  G LN+A +L K+M    +KP+ V + ++L AC    +V+ G+    A ++
Sbjct: 2367 GCMVDLFGRAGCLNEAYNLIKRM---KMKPDFVVWGSLLGACRIHKNVDLGE--IAAQKL 2421

Query: 629  FGVEPD-LQHYACMVDLLSRSG---DIE 652
            F ++PD   +Y  + +L + +G   D+E
Sbjct: 2422 FELDPDNCGYYVLLSNLYADAGRWADVE 2449



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 218/415 (52%), Gaps = 21/415 (5%)

Query: 98   YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
            +P  +++CS+L DL SG   H +    GF+ D  + ++++  Y + G L DAR +FD++ 
Sbjct: 2018 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 2077

Query: 158  SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP--------DFVTMLSLAEACGEL 209
             R+VVSW+S+I  Y  N      L +F   + E  E         D V M+S+  AC  +
Sbjct: 2078 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 2137

Query: 210  CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
                    +HG V+++       +GN+ +  Y+KCG  L +++ F  +E++   SW +MI
Sbjct: 2138 SGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMI 2197

Query: 270  SCYNRSGWFQKALESFVKMLE-VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
            + Y +SG   +ALE F  M+  V    N +TL  VL +CA  G LR GK +H Q+I+  M
Sbjct: 2198 AVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK--M 2255

Query: 329  GPEYDY-LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
              EY+  +G ++I+ Y +CG++   +K    + E+N+ SW  +++ Y   G +KEAL++ 
Sbjct: 2256 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIF 2315

Query: 388  VQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVIKIDCKDEFVQSSLIDMYS 444
             +M   G+ P+  +  S L+AC + G ++ G        H   I+   E     ++D++ 
Sbjct: 2316 YKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY-GCMVDLFG 2374

Query: 445  KCGFKNLAYLLFERIQQK-SVVMWNSMI--CGFYQNGN--SLEAINLFHQMYLNC 494
            + G  N AY L +R++ K   V+W S++  C  ++N +   + A  LF     NC
Sbjct: 2375 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNC 2429



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 33/390 (8%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L ++C N + L ++HA ++ +GL  D   + +LI  Y+  G +  + L+F   + P +F 
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W ++I+    N   E++++LY  M+ +      F +P V++AC++   +  G+ VHG +I
Sbjct: 93  WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152

Query: 123 KCGFDKDDVIQTSIL-----CTYGEF--------------------------GCLDDARK 151
           K GF  D  +Q +++     C +  F                          G L +AR+
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +FD++ S++VVSW+++I  Y  N    E L++F  M  E + P+  TM+SL +AC E+  
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   R IH + ++  I+I   LG + I MYSKCG +  A   F  + ++   +W +MI+ 
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GMGP 330
               G  Q+AL  F +M  V  +P+ IT I VL +C  +  ++EG +   ++ +  G+ P
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392

Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIG 360
             ++    + E YA    + E  K    +G
Sbjct: 393 IPEHY-ECMTELYARSNNLDEAFKSTKEVG 421



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 176/324 (54%), Gaps = 12/324 (3%)

Query: 5    RSCTNLRKLT--RL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
            +SC+ L  L   R+ H    V G   D   S+ LI+ Y++ G L+ +R +FD     +  
Sbjct: 2023 KSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVV 2082

Query: 62   MWAVLIKCYMWNNFFEESILLYHKMIREQATISN--------FIYPSVLRACSSLGDLGS 113
             W  +I  Y+ N   + ++LL+   + E+  + +         +  SVL ACS +   G 
Sbjct: 2083 SWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGI 2142

Query: 114  GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
             E VHG ++K GFD    +  +++  Y + G    ++KVFD M  +D +SW+S+IA Y  
Sbjct: 2143 TEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQ 2202

Query: 174  NADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
            +    E L++FH MVR  GV  + VT+ ++  AC    +LR  + IH  V++  ++ +  
Sbjct: 2203 SGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVC 2262

Query: 233  LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
            +G S I MY KCG +  A++TF +++++   SWTAM++ Y   G  ++AL+ F KM+   
Sbjct: 2263 VGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG 2322

Query: 293  EEPNLITLITVLGSCAGLGWLREG 316
             +PN IT ++VL +C+  G + EG
Sbjct: 2323 VKPNYITFVSVLAACSHAGLVEEG 2346



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 165/349 (47%), Gaps = 35/349 (10%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +L+ C +   L    ++H +II+ G   D ++   ++  Y   G +  A  +F ++ +  
Sbjct: 33  LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
             +W+ II +   N    + L ++ +MV +G+  D  T   + +AC    S+   + +HG
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCG-------------------------------DLLS 249
            +++     D  + N+ I  Y KCG                               DL  
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A R F +I  +   SWTAMI+ Y R+   ++ALE F +M      PN  T+++++ +C  
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           +G L  G+ +H   I+  +     YLG ALI+ Y++CG + +  +V   +  +++ +WN 
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGV-YLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +I+     G+ +EAL L  +M+   + PD+ +    L AC ++ +++ G
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 8/170 (4%)

Query: 450  NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
            NLA   ++ + + +V  WNS+I    + G+S+EA+  F  +    L     +F   I++C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025

Query: 510  SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
            S +  L  G+  H +   +G   D+++ +AL DMY+KCG L+ A+ +FD +  RNVVSW+
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085

Query: 570  AMIDCYGMHGQLNDAASLFKQMLD--------SGIKPNEVTFMNILWACS 611
            +MI  Y  + Q ++A  LFK  L+        + +  + V  +++L ACS
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 4/174 (2%)

Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           L  +Q C N   L +   +H K+I  G+  D  +   L  +Y+  G +  A  +F  +  
Sbjct: 31  LFLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN 87

Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
               +W+ +I    ++G    A  L+K M+  GI  ++ TF  ++ AC++  S++ GK  
Sbjct: 88  PCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVV 147

Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             ++  +G   D+     ++D   + G    A K+   M    N   W  +++G
Sbjct: 148 HGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV-RNVVSWTTVISG 200


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 184/561 (32%), Positives = 309/561 (55%), Gaps = 21/561 (3%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP---LGNSFIVMYSKCGDLL 248
           + PD  T   L  A     +  PA +   H    ++ +  P      S +  Y + G + 
Sbjct: 65  LRPDSFTFPPLVRA-----APGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVA 119

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
            A R F ++ +R   +W AM+S   R+     A+    +M+      + +TL +VL  C 
Sbjct: 120 EAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCV 179

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            LG       +H   ++ G+  E  ++  ALI+ Y + G ++E   V   +  R++++WN
Sbjct: 180 VLGDRALALVMHVYAVKHGLSGEL-FVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWN 238

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSF---SVASSLSACGNVGSLQLGLQ-IHGH 424
            +IS   + G    A+EL   M   G+ PD     S+AS+++ CG+    +LG + +H +
Sbjct: 239 SIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGD----ELGAKSVHCY 294

Query: 425 VIKI--DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
           V +   D  D    ++++DMY+K    + A  +F+ +  + VV WN++I G+ QNG + E
Sbjct: 295 VRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANE 354

Query: 483 AINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
           AI +++ M+ +  L+  + TF++ + A S +G L++G  +H   I  G+  D+Y+ T L 
Sbjct: 355 AIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLI 414

Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
           D+YAKCG L  A  +F+ M  R+   W+A+I   G+HG    A SLF QM    IKP+ V
Sbjct: 415 DLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHV 474

Query: 602 TFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
           TF+++L ACSH+G V++G+ +F+ M+ ++G+ P  +HY CMVD+L R+G ++ AF+ I S
Sbjct: 475 TFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQS 534

Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
           MP   + ++WGALL  CRIH  +++ K   + L      + GYY L+SN+YA+ G WD  
Sbjct: 535 MPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGV 594

Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
             VRS++    L+K PG+S++
Sbjct: 595 DAVRSLVRRQNLQKTPGWSSM 615



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 281/563 (49%), Gaps = 42/563 (7%)

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT-SILCTYGEFGCLDDARKVF 153
           +F +P ++RA        S  ++H   ++ G    +V  + S++  Y  FG + +A +VF
Sbjct: 69  SFTFPPLVRAAPGPA---SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVF 125

Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
           D+M  RDV +W+++++    N   ++ + +   MV EGV  D VT+ S+   C  L    
Sbjct: 126 DEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRA 185

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
            A  +H + ++  +  +  + N+ I +Y K G L  A   F  +  R   +W ++IS   
Sbjct: 186 LALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANE 245

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           + G    A+E F  M+E    P+++TL+++  + A  G     KSVHC + R+G      
Sbjct: 246 QGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDI 305

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
             G A+++ YA+  K+   +KV   + +R+++SWN LI+ Y + G++ EA+ +   M   
Sbjct: 306 IAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNH 365

Query: 394 -GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNL 451
            GL P   +  S L A   +G LQ G+++H   IK     D +V + LID+Y+KCG    
Sbjct: 366 EGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVE 425

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  LFE + ++S   WN++I G   +G+  +A++LF QM    ++ D VTF++ + ACS+
Sbjct: 426 AMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSH 485

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
            G +++G+        + + + +Y    +   Y                        + M
Sbjct: 486 AGLVDQGRSF------FDLMQTVYGIVPIAKHY------------------------TCM 515

Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
           +D  G  GQL++A    + M    IKP+   +  +L AC   G+VE GK    +  +F +
Sbjct: 516 VDMLGRAGQLDEAFEFIQSM---PIKPDSAVWGALLGACRIHGNVEMGK--VASQNLFEL 570

Query: 632 EPD-LQHYACMVDLLSRSGDIEG 653
           +P+ + +Y  M ++ ++ G  +G
Sbjct: 571 DPENVGYYVLMSNMYAKIGKWDG 593



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 234/491 (47%), Gaps = 21/491 (4%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           PL R+        +LHA  L  GL H +  AS  L+ +Y   G +  +  VFD   E D 
Sbjct: 74  PLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDV 133

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  ++     N    +++ L  +M+ E          SVL  C  LGD      +H  
Sbjct: 134 PAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVY 193

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +K G   +  +  +++  YG+ G L +A  VF  M  RD+V+W+SII++      V+  
Sbjct: 194 AVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAA 253

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIV 239
           +++FH M+  GV PD +T++SLA A  +      A+S+H +V RR   + D   GN+ + 
Sbjct: 254 VELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVD 313

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLI 298
           MY+K   + +A++ F  +  R   SW  +I+ Y ++G   +A+  +  M   +  +P   
Sbjct: 314 MYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQG 373

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T ++VL + + LG L++G  +H   I+ G+  +  Y+   LI+ YA+CGK+ E   +   
Sbjct: 374 TFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDV-YVTTCLIDLYAKCGKLVEAMFLFEH 432

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  R+   WN +I+     G   +AL L  QMQ   + PD  +  S L+AC + G +  G
Sbjct: 433 MPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQG 492

Query: 419 ------LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV----VMWN 468
                 +Q    ++ I        + ++DM  + G  + A   FE IQ   +     +W 
Sbjct: 493 RSFFDLMQTVYGIVPIAKH----YTCMVDMLGRAGQLDEA---FEFIQSMPIKPDSAVWG 545

Query: 469 SMICGFYQNGN 479
           +++     +GN
Sbjct: 546 ALLGACRIHGN 556



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 4/183 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  R+HA  + TGL+ D   +T LI+ YA+ G L  +  +F+      +
Sbjct: 379 LPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRST 438

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
             W  +I     +    +++ L+ +M +E+    +  + S+L ACS  G +  G      
Sbjct: 439 GPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFF-D 497

Query: 121 IIKCGFDKDDVIQ--TSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADV 177
           +++  +    + +  T ++   G  G LD+A +    M  + D   W +++ +   + +V
Sbjct: 498 LMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNV 557

Query: 178 SEG 180
             G
Sbjct: 558 EMG 560


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 199/663 (30%), Positives = 343/663 (51%), Gaps = 25/663 (3%)

Query: 90  QATISNFIYPSVLRAC----SSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           Q  I+ F + S L       S   +L +G  VH +II+ G          ++  Y + G 
Sbjct: 7   QTEINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQ 66

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG---LKMFHSMVREGVEPDFVTMLSL 202
           L  A  +F+ +  +DVVSW+S+I  Y  N  +S     +++F  M  + + P+  T+  +
Sbjct: 67  LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGI 126

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
            +A   L S    R  H  V++     D  +  S + MY K G             K   
Sbjct: 127 FKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG------------LKYLY 174

Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL--ITLITVLGSCAGLGWLREGKSVH 320
             +     CY +    ++ L+S +  LE KE+ +        VL S A   ++  G+ +H
Sbjct: 175 MVYYGFWLCYKKD-VLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIH 233

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
              ++ G+   +  L  AL+  Y++C  ++E  K+  + G+RN ++W+ +++ Y++ G S
Sbjct: 234 GITVKNGL-LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 292

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSL 439
            EA++L  +M + G+ P  +++   L+AC ++  L  G Q+H  ++K+  +   F  ++L
Sbjct: 293 LEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTAL 352

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDE 499
           +DMY+K G    A   F+ +Q++ V +W S+I G+ QN ++ EA+ L+ +M    +  ++
Sbjct: 353 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 412

Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
            T  + ++ACS++  LE GK VH   I +G   ++ I +AL+ MY KCG L+    VF  
Sbjct: 413 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRR 472

Query: 560 MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
              ++VVSW+AMI     +GQ ++A  LF++ML  G +P++VTF+NI+ ACSH G VE G
Sbjct: 473 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERG 532

Query: 620 KFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
             YF+ M   FG++P + HYACMVD+LSR+G ++   + I S        +W  LL+ C+
Sbjct: 533 WSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSACK 592

Query: 679 IHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
            H   ++     ++L   G+ ++  Y  L+ IY   G   +  +V  +M   G+ K  G 
Sbjct: 593 NHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWKLMRTNGVSKEVGC 652

Query: 739 STI 741
           S I
Sbjct: 653 SWI 655



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 184/717 (25%), Positives = 329/717 (45%), Gaps = 54/717 (7%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL     +HA ++ TG       +  L+  YA+ G L  +  +F+     D   W  LI 
Sbjct: 31  NLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLIT 90

Query: 69  CYMWNNFFEES--ILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
            Y  N     S  ++   + +R Q  + N +    + +A SSL     G + H  ++K  
Sbjct: 91  GYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMS 150

Query: 126 FDKDDVIQTSILCTYGEFGC--LDDARKVFDKMTSRDVV--SWSSIIASYFDNADVSEGL 181
              D  + TS++  Y + G   L      F     +DV+     S I    +    S+  
Sbjct: 151 SFGDIYVDTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKESDSD 210

Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
            +F +++       +V +                R IHG  ++  +     L N+ + MY
Sbjct: 211 YVFTAVLSSLAATVYVGL---------------GRQIHGITVKNGLLGFVALSNALVTMY 255

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
           SKC  L  A + F     R + +W+AM++ Y+++G   +A++ F +M     +P+  T++
Sbjct: 256 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIV 315

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            VL +C+ + +L EGK +H  +++ G    + +   AL++ YA+ G +++  K    + E
Sbjct: 316 GVLNACSDICYLVEGKQLHSFLLKLGF-ERHLFATTALVDMYAKAGCLADARKGFDCLQE 374

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           R++  W  LIS Y +   ++EAL L  +M+T G++P+  ++AS L AC ++ +L+LG Q+
Sbjct: 375 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 434

Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           HGH IK     E  + S+L  MY+KCG      L+F R   K VV WN+MI G   NG  
Sbjct: 435 HGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 494

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID--T 538
            EA+ LF +M     E D+VTF+  I ACS+ G +E+G W +  ++S     D  +D   
Sbjct: 495 DEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERG-WSYFHMMSDQFGLDPKVDHYA 553

Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
            + D+ ++ G L+  +   +S S +  +  W  ++     HG         ++++  G +
Sbjct: 554 CMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSR 613

Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            +  T++ +    +  G + + +  +  MR  GV  ++    C                 
Sbjct: 614 ESS-TYVQLAGIYTALGRMRDVERVWKLMRTNGVSKEV---GC----------------- 652

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
                + A  + W   + G  +H RI+  K +   +S     + G+ T+L++ Y EE
Sbjct: 653 ----SWIALKNQWHVFVVGDTMHPRIEETKDLVSLVS-RQMLEEGFVTVLNSSYVEE 704


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/577 (31%), Positives = 303/577 (52%), Gaps = 45/577 (7%)

Query: 174  NADVSEGLKMFHSMVREGVEPDFVTM-LSLAEA-CGELCSLRPA----RSIHGHV-LRRK 226
            +A     +K   ++V    +P F    + L E  CG++    P     + +H  + +   
Sbjct: 996  SASPPSAVKQLQTLVLSIQKPKFTQQXVVLTENLCGQILDKNPDIKYLKKLHSKICIDHD 1055

Query: 227  IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
            +  +  LG   +  Y+ CG+  S    F +I K+    +  MI  Y  +  +  AL  F 
Sbjct: 1056 LHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFK 1115

Query: 287  KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
             M     +P+  T   VL + +G   L  G  +H  ++R G+     ++G  LI  Y +C
Sbjct: 1116 NMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNV-FVGNGLISMYGKC 1174

Query: 347  GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
            G + E  +V+  +  R+++SWN L++  AR G   +ALE+  +M+  GL PD+ ++AS L
Sbjct: 1175 GCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLL 1234

Query: 407  SACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL--LFERIQQKSV 464
             A  N                  C D                 N++++  +F ++  KS+
Sbjct: 1235 PAVTNT-----------------CLD-----------------NVSFVKEMFMKLANKSL 1260

Query: 465  VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
            V WN MI  +  N    EA+++F QM  + ++ D ++  + + AC ++  L  G+ +H  
Sbjct: 1261 VSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEY 1320

Query: 525  LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
            ++   ++ ++ ++ AL DMYAKCG L+ A+ VFD M  R+VVSW++MI  YGM+G+  DA
Sbjct: 1321 VVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDA 1380

Query: 585  ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVD 643
             SLF +M D G+ P+ + F+++L ACSH+G ++EG++YF  M     + P ++H+ CMVD
Sbjct: 1381 VSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVD 1440

Query: 644  LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGY 703
            LL R+G ++ A+  I  MP   N  +WGALL+ CR++  + +      +L       +GY
Sbjct: 1441 LLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGY 1500

Query: 704  YTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYST 740
            Y LLSNIYA+ G W++   VRSIM+  G+KK+PG S 
Sbjct: 1501 YVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSN 1537



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 241/479 (50%), Gaps = 48/479 (10%)

Query: 9    NLRKLTRLHAHLLVT-GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
            +++ L +LH+ + +   LH +P    +L+ +YA  G   S+R +FD   + +   + V+I
Sbjct: 1039 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 1098

Query: 68   KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
            + Y+ N+ + +++L++  M        ++ YP VL+A S   DL  G ++H  +++ G D
Sbjct: 1099 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 1158

Query: 128  KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
             +  +   ++  YG+ GCL +A +V D+M  RDVVSW+S++A    N    + L++   M
Sbjct: 1159 LNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 1218

Query: 188  VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN-SFIVMYSKCGD 246
               G++PD  TM SL  A    C                      L N SF+        
Sbjct: 1219 ELLGLKPDAGTMASLLPAVTNTC----------------------LDNVSFV-------- 1248

Query: 247  LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
                +  F+K+  +   SW  MI+ Y  +    +A++ F++M +   +P+ I++ +VL +
Sbjct: 1249 ----KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPA 1304

Query: 307  CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
            C  L  L  G+ +H  ++RK + P    L  ALI+ YA+CG +    +V   +  R+++S
Sbjct: 1305 CGDLSALLLGRRIHEYVVRKRLQPNL-LLENALIDMYAKCGCLEYAREVFDQMKFRDVVS 1363

Query: 367  WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
            W  +IS Y   G  ++A+ L  +MQ  GL PDS +  S LSAC + G L  G + +  ++
Sbjct: 1364 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEG-RYYFKLM 1422

Query: 427  KIDCK-----DEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
              +CK     + FV   ++D+  + G  + AY   +++  + +  +W +++  C  Y N
Sbjct: 1423 TEECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 1479



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 156/309 (50%), Gaps = 19/309 (6%)

Query: 100  SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA---RKVFDKM 156
            S++  C+  G      +V   +   G   D     S+L       CLD+    +++F K+
Sbjct: 1197 SLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTN-TCLDNVSFVKEMFMKL 1255

Query: 157  TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
             ++ +VSW+ +IA Y +N+  +E + +F  M    V+PD +++ S+  ACG+L +L   R
Sbjct: 1256 ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 1315

Query: 217  SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
             IH +V+R++++ +  L N+ I MY+KCG L  A   F +++ R   SWT+MIS Y  +G
Sbjct: 1316 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 1375

Query: 277  WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK------SVHCQIIRKGMGP 330
              + A+  F +M ++   P+ I  ++VL +C+  G L EG+      +  C+I+     P
Sbjct: 1376 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIV-----P 1430

Query: 331  EYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQ 389
              ++    +++     G++ E    I  +  E N   W  L+S  A +  S   + LL  
Sbjct: 1431 RIEHFV-CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS--ACRVYSNMIIGLLAA 1487

Query: 390  MQTWGLMPD 398
             Q + L P+
Sbjct: 1488 DQLFQLCPE 1496


>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 213/704 (30%), Positives = 342/704 (48%), Gaps = 43/704 (6%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW---- 72
           HA ++V+G   D   +  L+  Y++ GSL  +  VFDT  E D   W  ++  Y      
Sbjct: 107 HARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERDLVTWNAILGAYASSVDS 166

Query: 73  NNFFEESILLYHKMIREQ-ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
           N+   +  L   +++RE   + +      VL+ CS+   L + + VHG  IK G   D  
Sbjct: 167 NDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAAKGVHGYAIKIGLVWDVF 226

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
           +  +++  Y + G + DAR +FD M  RDVV W+ ++  Y       E  ++F    R G
Sbjct: 227 VFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 286

Query: 192 VEPDFVTMLSLAEACGELCSLR---PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           + PD  ++  +     E+        A  +  +  +  +  D               D+ 
Sbjct: 287 LXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSLSDDN-------------XDVF 333

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
                           W   +S Y  +G    A+E FV M  +    + +TL+ VL + A
Sbjct: 334 C---------------WNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAAVA 378

Query: 309 -GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
            GL   R+   +H   ++     +  ++  ALI+ Y+  GKM E E +     + ++  W
Sbjct: 379 DGLNISRQ---IHVHALKTSNIAD-SFVATALIDVYSRSGKMEEAELLFQNKDDLDLACW 434

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N ++  Y       +AL L   +   G   D  ++A++  ACG +  L  G QIH HVIK
Sbjct: 435 NAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHVIK 494

Query: 428 ID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
                D +V S ++DMY KCG    A ++F  I     V W SMI G   NGN  +A+ +
Sbjct: 495 AGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 554

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
           +HQM  + +  DE TF T I+A S +  LE+G+ +H  +I      D ++ T+L DMYAK
Sbjct: 555 YHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 614

Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
           CG+++   R+F  M+ RN+V W+AM+     HG   +A +LFK M   GI+P+ V+F+ I
Sbjct: 615 CGNIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 674

Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACS +G   E   YF++M    G+EP+++HY+C+VD L  +G ++   K+I +MPF A
Sbjct: 675 LSACSLAGLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGXAGLVQEXDKVIETMPFKA 734

Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
           + S+  ALL  CRI   +++ K +   L      D+  Y   S+
Sbjct: 735 SASMNRALLGACRIQGDVEIGKRVAARLFALEPFDSAAYGFFSH 778



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 171/640 (26%), Positives = 283/640 (44%), Gaps = 75/640 (11%)

Query: 2   PLFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           P+ + C+N   L     +H + +  GL +D      L+  Y++ G +  +RL+FD  +E 
Sbjct: 195 PVLKLCSNSXCLWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRER 254

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGS--GE 115
           D  +W +++K Y+     +E+  L+ +  R       F    +L     +  D G    +
Sbjct: 255 DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWHAD 314

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
           +V     K     D+                             DV  W+  ++ Y    
Sbjct: 315 QVQAYXXKLSLSDDNX----------------------------DVFCWNKKLSEYLWAG 346

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGN 235
           D    ++ F +M    V  D VT+L +  A  +   L  +R IH H L+     D  +  
Sbjct: 347 DNWGAIECFVNMNGLNVXYDXVTLLEVLAAVAD--GLNISRQIHVHALKTSNIADSFVAT 404

Query: 236 SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEP 295
           + I +YS+ G +  AE  F   +      W AM+  Y  S    KAL  F  +    E+ 
Sbjct: 405 ALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKS 464

Query: 296 NLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV 355
           + ITL T   +C  L  L ZGK +H  +I+ G   +  Y+   +++ Y +CG M     V
Sbjct: 465 DQITLATAAKACGCLVLLDZGKQIHAHVIKAGFXSDL-YVNSGILDMYIKCGDMVNAGIV 523

Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
            + I   + ++W  +IS     G   +AL +  QM+  G+MPD ++ A+ + A   V +L
Sbjct: 524 FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTAL 583

Query: 416 QLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGF 474
           + G Q+H +VIK+DC  D FV +SL+DMY+KCG     Y LF+++  +++V+WN+M+ G 
Sbjct: 584 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVGI 643

Query: 475 YQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG-QLEKGKWVHHKLISYGVRKD 533
            Q+GN+ EA+NLF  M  + +E D V+F+  + ACS  G   E  ++ H      G+  +
Sbjct: 644 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSLAGLTSEAYEYFHSMPNDCGIEPE 703

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
           I   + L D     G +Q   +V ++M              +     +N A         
Sbjct: 704 IEHYSCLVDALGXAGLVQEXDKVIETMP-------------FKASASMNRA--------- 741

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEP 633
                       +L AC   G VE GK    A R+F +EP
Sbjct: 742 ------------LLGACRIQGDVEIGKRV--AARLFALEP 767



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 219/509 (43%), Gaps = 48/509 (9%)

Query: 212 LRPARSIHGHVLRR----KIKIDGPLG-----NSFIVMYSKCGDLLSAERTFVKIEKRCT 262
           LR A S H  +L +    +I + G  G     N+ + +YSKCG L  A + F    +R  
Sbjct: 91  LRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERDL 150

Query: 263 TSWTAMISCYNRS-----GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            +W A++  Y  S     G  Q+ L  F  + E       +TL  VL  C+    L   K
Sbjct: 151 VTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAAK 210

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            VH   I+ G+  +    G  L+  Y++CG+M +   +   + ER+++ WNM++  Y + 
Sbjct: 211 GVHGYAIKIGLVWDVFVFG-TLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYVQL 269

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ---LGLQIHGHVIKIDCKDEF 434
           G+ KEA +L  +    GL PD FSV   L+    V   +      Q+  +  K+   D+ 
Sbjct: 270 GLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSLSDD- 328

Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
                                        V  WN  +  +   G++  AI  F  M    
Sbjct: 329 --------------------------NXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLN 362

Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
           +  D VT L  + A ++   L   + +H   +      D ++ TAL D+Y++ G ++ A+
Sbjct: 363 VXYDXVTLLEVLAAVAD--GLNISRQIHVHALKTSNIADSFVATALIDVYSRSGKMEEAE 420

Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
            +F +  + ++  W+AM+  Y +    N A  LF  +  SG K +++T      AC    
Sbjct: 421 LLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLV 480

Query: 615 SVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            ++ZGK     +   G   DL   + ++D+  + GD+  A  + + +  P + + W +++
Sbjct: 481 LLDZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA-WTSMI 539

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGY 703
           +GC  +   D    I  ++  +G   + Y
Sbjct: 540 SGCVDNGNEDQALRIYHQMRQSGVMPDEY 568



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 34/330 (10%)

Query: 414 SLQLGLQIHGH-VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           +L LG   H   V+     D F+ ++L+ +YSKCG  + A  +F+   ++ +V WN+++ 
Sbjct: 99  NLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERDLVTWNAILG 158

Query: 473 GFY-----QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
            +       +GN+ E ++LF  +  +      +T    ++ CSN   L   K VH   I 
Sbjct: 159 AYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAAKGVHGYAIK 218

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
            G+  D+++   L ++Y+KCG +  A+ +FD M ER+VV W+ M+  Y   G   +A  L
Sbjct: 219 IGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYVQLGLEKEAFQL 278

Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIF----GVEPDLQHYACMVD 643
           F +   SG+ P+E +   IL       + +EGK++ + ++ +     +  D     C   
Sbjct: 279 FSEFHRSGLXPDEFSVQLILNGVFEV-NXDEGKWHADQVQAYXXKLSLSDDNXDVFCWNK 337

Query: 644 LLSR---SGDIEGAFKMIHSMPFPANG-----------SIWGALLNGCRIHKRIDVMKTI 689
            LS    +GD  GA +   +M    NG            +  A+ +G  I ++I V    
Sbjct: 338 KLSEYLWAGDNWGAIECFVNM----NGLNVXYDXVTLLEVLAAVADGLNISRQIHV---- 389

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
              L  +   D+   T L ++Y+  G  +E
Sbjct: 390 -HALKTSNIADSFVATALIDVYSRSGKMEE 418


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 169/542 (31%), Positives = 292/542 (53%), Gaps = 36/542 (6%)

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE- 293
           N+ +   +    L   E  F  + +R   S+ A+I+ ++  G   +A+  ++ +L+    
Sbjct: 76  NALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSS 135

Query: 294 -EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE------- 345
             P+ IT+ T++ + + LG    GK  HCQI+R G G    ++G  L++ YA+       
Sbjct: 136 VRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANA-FVGSPLVDMYAKMSLVGDA 194

Query: 346 ------------------------CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
                                   C  + E  ++   + +R+ ++W  +++ + + G+  
Sbjct: 195 KRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLES 254

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLI 440
           EALE+  +M+  G+  D ++  S L+ACG + +L+ G QIH ++I+    D  FV S+L+
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALV 314

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
           DMYSKC    LA  +F R+  K+++ W ++I G+ QNG S EA+ +F +M  + ++ D+ 
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDY 374

Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
           T  + I +C+N+  LE+G   H   +  G+   I +  AL  +Y KCG ++ A R+FD M
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434

Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           S  + VSW+A++  Y   G+  +   LF++ML  G+KP+ VTF+ +L ACS +G VE+G+
Sbjct: 435 SFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGR 494

Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
            YF++M +  G+ P   HY CM+DL SRSG ++ A + I  MP   +   WG LL+ CR+
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554

Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
              +++ K   + L      +   Y LL +++A +G W+E  ++R  M    +KK PG S
Sbjct: 555 RGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCS 614

Query: 740 TI 741
            I
Sbjct: 615 WI 616



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 255/549 (46%), Gaps = 78/549 (14%)

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR--EGV 192
           ++L T      L D   +F  MT RD+VS++++IA +      ++ ++++ ++++    V
Sbjct: 77  ALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSV 136

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P  +TM ++  A   L      +  H  +LR     +  +G+  + MY+K   +  A+R
Sbjct: 137 RPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKR 196

Query: 253 TFVKIEK--------------RC-----------------TTSWTAMISCYNRSGWFQKA 281
            F +++               RC                 + +WT M++ + ++G   +A
Sbjct: 197 AFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEA 256

Query: 282 LESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPA 338
           LE F +M       +  T  ++L +C  L  L +GK +H  IIR      YD   ++G A
Sbjct: 257 LEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT----RYDDNVFVGSA 312

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
           L++ Y++C  +   E V   +  +NI+SW  LI  Y + G S+EA+ +  +MQ  G+ PD
Sbjct: 313 LVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD 372

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFE 457
            +++ S +S+C N+ SL+ G Q H   +         V ++L+ +Y KCG    A+ LF+
Sbjct: 373 DYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFD 432

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            +     V W +++ G+ Q G + E I+LF +M    ++ D VTF+  + ACS  G +EK
Sbjct: 433 EMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEK 492

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+   H +     +KD  I   + D Y                        + MID Y  
Sbjct: 493 GRSYFHSM-----QKDHGI-VPIDDHY------------------------TCMIDLYSR 522

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
            G+L +A    KQM    + P+ + +  +L AC   G +E GK+    +    +E D Q+
Sbjct: 523 SGKLKEAEEFIKQM---PMHPDAIGWGTLLSACRLRGDMEIGKWAAENL----LEIDPQN 575

Query: 638 YACMVDLLS 646
            A  V L S
Sbjct: 576 PASYVLLCS 584



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 144/589 (24%), Positives = 260/589 (44%), Gaps = 85/589 (14%)

Query: 16  LHAHLLVTGLHYDPPAS--TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
           LH  +L T L + PP      L+ +Y + G    +R VFD    P+ F +  L+      
Sbjct: 27  LHCVILRT-LPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHA 85

Query: 74  NFFEESILLYHKMIRE-----QATISNF-----------IYPSVLRA------------- 104
               +   L+  M +       A I+ F           +Y ++L+A             
Sbjct: 86  RLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMST 145

Query: 105 ----CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK----- 155
                S+LGD   G++ H +I++ GF  +  + + ++  Y +   + DA++ FD+     
Sbjct: 146 MVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKN 205

Query: 156 --------------------------MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
                                     MT RD ++W++++  +  N   SE L++F  M  
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRF 265

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +G+  D  T  S+  ACG L +L   + IH +++R +   +  +G++ + MYSKC  +  
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKL 325

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           AE  F ++  +   SWTA+I  Y ++G  ++A+  F +M     +P+  TL +V+ SCA 
Sbjct: 326 AETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCAN 385

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           L  L EG   HC  +  G+   Y  +  AL+  Y +CG + +  ++   +   + +SW  
Sbjct: 386 LASLEEGAQFHCLALVSGL-MHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 444

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG------LQIHG 423
           L+S YA+ G +KE ++L  +M   G+ PD  +    LSAC   G ++ G      +Q   
Sbjct: 445 LVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDH 504

Query: 424 HVIKIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
            ++ ID  D +  + +ID+YS+ G  K     + +       + W +++      G+   
Sbjct: 505 GIVPID--DHY--TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD--- 557

Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            + +      N LE+D     + +  CS      KG+W     +  G+R
Sbjct: 558 -MEIGKWAAENLLEIDPQNPASYVLLCSM--HAAKGQWNEVAQLRRGMR 603



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 210/446 (47%), Gaps = 43/446 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEM--------------------------GSLR-- 46
           + H  +L  G   +    + L++ YA+M                          G LR  
Sbjct: 161 QFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCK 220

Query: 47  ---SSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLR 103
               +R +F+   + DS  W  ++  +  N    E++ ++ +M  +   I  + + S+L 
Sbjct: 221 MVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILT 280

Query: 104 ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
           AC +L  L  G+++H  II+  +D +  + ++++  Y +   +  A  VF +MT ++++S
Sbjct: 281 ACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS 340

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+++I  Y  N    E +++F  M R+G++PD  T+ S+  +C  L SL      H   L
Sbjct: 341 WTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLAL 400

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
              +     + N+ + +Y KCG +  A R F ++      SWTA++S Y + G  ++ ++
Sbjct: 401 VSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETID 460

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS-VHCQIIRKGMGPEYDYLGPALIEF 342
            F KML    +P+ +T I VL +C+  G++ +G+S  H      G+ P  D+    +I+ 
Sbjct: 461 LFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY-TCMIDL 519

Query: 343 YAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKG---MSKEALELLVQMQTWGLMPD 398
           Y+  GK+ E E+ I  +    + + W  L+S    +G   + K A E L+++      P 
Sbjct: 520 YSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQN--PA 577

Query: 399 SFSVASSLSAC----GNVGSLQLGLQ 420
           S+ +  S+ A       V  L+ G++
Sbjct: 578 SYVLLCSMHAAKGQWNEVAQLRRGMR 603



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 165/361 (45%), Gaps = 43/361 (11%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           + L +  ++HA+++ T    +    + L++ Y++  S++ +  VF      +   W  LI
Sbjct: 286 SALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALI 345

Query: 68  KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
             Y  N   EE++ ++ +M R+     ++   SV+ +C++L  L  G + H   +  G  
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLM 405

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
               +  +++  YG+ G ++DA ++FD+M+  D VSW+++++ Y       E + +F  M
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM 465

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           + +GV+PD VT + +  AC     +   RS + H +++                      
Sbjct: 466 LAKGVKPDGVTFIGVLSACSRAGFVEKGRS-YFHSMQK---------------------- 502

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
              +   V I+      +T MI  Y+RSG  ++A E F+K + +   P+ I   T+L +C
Sbjct: 503 ---DHGIVPIDDH----YTCMIDLYSRSGKLKEA-EEFIKQMPM--HPDAIGWGTLLSAC 552

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPA----LIEFYAECGKMSECEKVIHAIGERN 363
              G +  GK     ++      E D   PA    L   +A  G+ +E  ++   + +R 
Sbjct: 553 RLRGDMEIGKWAAENLL------EIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQ 606

Query: 364 I 364
           +
Sbjct: 607 V 607



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 5/170 (2%)

Query: 6   SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           SC NL  L    + H   LV+GL +    S  L+  Y + GS+  +  +FD     D   
Sbjct: 382 SCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS 441

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK-VHGRI 121
           W  L+  Y      +E+I L+ KM+ +        +  VL ACS  G +  G    H   
Sbjct: 442 WTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQ 501

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
              G    D   T ++  Y   G L +A +   +M    D + W +++++
Sbjct: 502 KDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 157/446 (35%), Positives = 253/446 (56%), Gaps = 1/446 (0%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+      +L  C  LG + +G+ VH  ++       +  L   ++  YA+CG + +  +
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   +  +++++W  LI+ +++    ++AL L  QM   GL P+ F+++S L A G+   
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204

Query: 415 LQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L  G Q+H   +K   +   +V S+L+DMY++CG  + A L F+ +  KS V WN++I G
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             + G    A++L  +M     +    T+ +   AC++IG LE+GKWVH  +I  G++  
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            +I   L DMYAK G +  A+RVFD + + +VVSW+ M+     HG   +    F+QML 
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            GI+PNE++F+ +L ACSHSG ++EG +YF  M+ + VEPD+ HY   VDLL R G ++ 
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A + I  MP     ++WGALL  CR+HK +++     +       +D+G   LLSNIYA 
Sbjct: 445 AERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYAS 504

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYS 739
            G W +  KVR +M+ +G+KK P  S
Sbjct: 505 AGRWRDVAKVRKMMKESGVKKQPACS 530



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 210/412 (50%), Gaps = 6/412 (1%)

Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP- 232
            +D   GL     + R  + PD+     L + C  L  +   R +H H++     +D   
Sbjct: 65  QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHL 123

Query: 233 -LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            L N  + MY+KCG L  A R F ++  +   +WTA+I+ ++++   + AL  F +ML +
Sbjct: 124 VLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRL 183

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +PN  TL ++L +      L  G  +H   ++ G      Y+G AL++ YA CG M  
Sbjct: 184 GLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV-YVGSALVDMYARCGHMDA 242

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
            +     +  ++ +SWN LIS +ARKG  + AL LL +MQ     P  F+ +S  SAC +
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302

Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
           +G+L+ G  +H H+IK   K   F+ ++L+DMY+K G  + A  +F+R+ +  VV WN+M
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362

Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
           + G  Q+G   E ++ F QM    +E +E++FL  + ACS+ G L++G +    +  Y V
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKV 422

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
             D+       D+  + G L  A+R    M  E     W A++    MH  +
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNM 474



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 211/398 (53%), Gaps = 7/398 (1%)

Query: 86  MIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVIQTSILCTYGEF 143
           +I+  + + ++ +Y  +L+ C+ LG +  G  VH  ++   F D   V+Q  I+  Y + 
Sbjct: 77  LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           GCLDDAR++FD+M ++D+V+W+++IA +  N    + L +F  M+R G++P+  T+ SL 
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +A G    L P   +H   L+   +    +G++ + MY++CG + +A+  F  +  +   
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW A+IS + R G  + AL    KM     +P   T  +V  +CA +G L +GK VH  +
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHM 316

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I+ G+     ++G  L++ YA+ G + + ++V   + + +++SWN +++  A+ G+ KE 
Sbjct: 317 IKSGLK-LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDM 442
           L+   QM   G+ P+  S    L+AC + G L  GL     + K   + +     + +D+
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDL 435

Query: 443 YSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
             + G  + A      +  + +  +W +++  C  ++N
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L + CT L K+ +   +HAHL+ +  L         ++  YA+ G L  +R +FD     
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  LI  +  NN   +++LL+ +M+R     ++F   S+L+A  S   L  G ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +K G+     + ++++  Y   G +D A+  FD M ++  VSW+++I+ +    +  
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L +   M R+  +P   T  S+  AC  + +L   + +H H+++  +K+   +GN+ +
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G +  A+R F ++ K    SW  M++   + G  ++ L+ F +ML +  EPN I
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 299 TLITVLGSCAGLGWLREG 316
           + + VL +C+  G L EG
Sbjct: 393 SFLCVLTACSHSGLLDEG 410



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 161/315 (51%), Gaps = 6/315 (1%)

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           ++L    +  G    AL+L+   Q   L+PD    +  L  C  +G ++ G  +H H++ 
Sbjct: 59  DLLRKSQSDGGTGLYALDLI---QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVD 115

Query: 428 IDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
               D    +Q+ +++MY+KCG  + A  +F+ +  K +V W ++I GF QN    +A+ 
Sbjct: 116 SHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALL 175

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF QM    L+ +  T  + ++A  +   L+ G  +H   + YG +  +Y+ +AL DMYA
Sbjct: 176 LFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYA 235

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           +CG +  AQ  FD M  ++ VSW+A+I  +   G+   A  L  +M     +P   T+ +
Sbjct: 236 RCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSS 295

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           +  AC+  G++E+GK+    M   G++        ++D+ +++G I+ A ++   +  P 
Sbjct: 296 VFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPD 355

Query: 666 NGSIWGALLNGCRIH 680
             S W  +L GC  H
Sbjct: 356 VVS-WNTMLTGCAQH 369


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 199/640 (31%), Positives = 333/640 (52%), Gaps = 21/640 (3%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFG--CLDDARKVFDKM--TSRDVVSWSSIIA 169
           GE +H   +K G      +  S++  Y       L  A  VFD +   +RDV SW+S++ 
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90

Query: 170 SYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
               +  + + L  F SM+    V P   +  +   A     S     + H        K
Sbjct: 91  PLSGHRPL-DALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHA----LACK 145

Query: 229 IDGPLGN-----SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           I   + N     S + MY K G +  A R F  + +R + SW+ M++ Y      ++A +
Sbjct: 146 IPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFD 205

Query: 284 SFVKMLE--VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
            F  MLE    E+   +    +      LG L  G+ +H  I++ G+  ++  +  +L+ 
Sbjct: 206 LFRLMLEECPSEKSEFVATAVLSAVSVPLGLLM-GEQMHGLIVKDGL-LDFVSVENSLVT 263

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            YA+ G M     V  +  ERN ++W+ +I+ YA+ G +  A+ +  QM   G  P  F+
Sbjct: 264 MYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFT 323

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ 460
               L+A  ++G+L +G Q HG ++K+  + + +V+S+L+DMY+KCG    A   F+++ 
Sbjct: 324 FVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLY 383

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           +  +V+W +M+ G  QNG   EA+ L+ +M    +   + T  + ++AC+ I  LE GK 
Sbjct: 384 EVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQ 443

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H +++ YG+     + +AL+ MY+KCG+L+    VF  + +R+V++W+++I  +  +G 
Sbjct: 444 LHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGC 503

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYA 639
            N A  LF++M   G  P+ +TF+NIL ACSH G V+ G  YF+ M + +G+ P L HYA
Sbjct: 504 GNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYA 563

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
           CMVD+LSR+G ++ A   I S+       +W  +L  CR  +  DV     + L   GT 
Sbjct: 564 CMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTG 623

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           D+  Y LLSNIYA +  W++  +VR +M + G+ K PG S
Sbjct: 624 DSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCS 663



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 206/387 (53%), Gaps = 2/387 (0%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QA 91
           T L+  Y ++G +  +R VFD   + +SF W+ ++  Y      EE+  L+  M+ E  +
Sbjct: 157 TSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPS 216

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
             S F+  +VL A S    L  GE++HG I+K G      ++ S++  Y + GC+  A  
Sbjct: 217 EKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFH 276

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VF+    R+ ++WS++I  Y  N +    + MF  M   G  P   T + +  A  +L +
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   +  HG +++   ++   + ++ + MY+KCG +  A+  F ++ +     WTAM+S 
Sbjct: 337 LAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSG 396

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           + ++G  ++AL  + +M +    P+  T+ + L +CAG+  L  GK +H QI++ G+G  
Sbjct: 397 HVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLG 456

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G AL   Y++CG + +   V   I +R++++WN +IS +++ G    AL+L  +M+
Sbjct: 457 AP-VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMK 515

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLG 418
             G +PD+ +  + L AC ++G +  G
Sbjct: 516 MEGTIPDNITFINILCACSHMGLVDRG 542



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 260/567 (45%), Gaps = 35/567 (6%)

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD--LLSAERT 253
           F+ +L    +C      R   ++H   L+       P+ NS I  YS      L +A   
Sbjct: 17  FIELLRRRASCP-----RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAV 71

Query: 254 FVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGL 310
           F  I    R  TSW ++++  +       AL  F  ML      P+  +      + A  
Sbjct: 72  FDDIPPAARDVTSWNSLLNPLSGHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARA 130

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
                G + H    +        Y+  +L+  Y + G +S+  +V   + +RN  SW+ +
Sbjct: 131 ASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTM 190

Query: 371 ISEYARKGMSKEALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           ++ YA +  S+EA +L  + ++        F   + LSA      L +G Q+HG ++K  
Sbjct: 191 VAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDG 250

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             D   V++SL+ MY+K G    A+ +FE  ++++ + W++MI G+ QNG +  A+++F 
Sbjct: 251 LLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFS 310

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           QM+       E TF+  + A S++G L  GK  H  ++  G    IY+ +AL DMYAKCG
Sbjct: 311 QMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCG 370

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  A+  FD + E ++V W+AM+  +  +G+  +A +L+ +M   GI P++ T  + L 
Sbjct: 371 CIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLR 430

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP----FP 664
           AC+   ++E GK     +  +G+       + +  + S+ G++E    +   +P      
Sbjct: 431 ACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA 490

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVT---------------GTNDNG--YYTLL 707
            N  I G   NGC  +  +D+ + ++ E ++                G  D G  Y++L+
Sbjct: 491 WNSIISGFSQNGCG-NGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLM 549

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           +  Y      D +  +  I+   G+ K
Sbjct: 550 TKDYGLTPRLDHYACMVDILSRAGMLK 576



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 183/346 (52%), Gaps = 2/346 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++  GL         L+  YA+ G + ++  VF++ +E +S  W+ +I  Y  N 
Sbjct: 241 QMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNG 300

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             + ++ ++ +M     T + F +  VL A S LG L  G++ HG ++K GF+    +++
Sbjct: 301 EADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKS 360

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + GC+ DA++ FD++   D+V W+++++ +  N +  E L ++  M +EG+ P
Sbjct: 361 ALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIP 420

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              T+ S   AC  + +L P + +H  +++  + +  P+G++   MYSKCG+L      F
Sbjct: 421 SKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVF 480

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +I  R   +W ++IS ++++G    AL+ F +M      P+ IT I +L +C+ +G + 
Sbjct: 481 RRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD 540

Query: 315 EGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            G      + +  G+ P  D+    +++  +  G + E +  I +I
Sbjct: 541 RGWEYFSLMTKDYGLTPRLDHYA-CMVDILSRAGMLKEAKDFIESI 585


>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
 gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
          Length = 616

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 179/576 (31%), Positives = 306/576 (53%), Gaps = 27/576 (4%)

Query: 169 ASYFDNADVSEG-----------LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
           +++FDN    +G           L    S  +E   P +  +L     CGEL +    + 
Sbjct: 35  STFFDNRRQQQGKSALPGGLDNALVWIDSHQQEDCAPAYGNLL---RDCGELAA---GKK 88

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH HV++     +  +GN  + MYSKCG L  A++ F  + +R + SW+ MI+ Y R G 
Sbjct: 89  IHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAGYVRHGL 148

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLG--WLREGKSVHCQIIRKGMGPEYDYL 335
            ++A++ +  M     +P+  T   VL +C+ LG   L  GK +H  + R  + P+  ++
Sbjct: 149 AREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKRIWLKPDV-FV 204

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM--QTW 393
             AL+  +A+CG + E  +V      +++L WN +I  Y++ G  +EA+EL   M   + 
Sbjct: 205 DSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSP 264

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLA 452
            + P++ +  + L+AC  V  L+ G ++H  ++    + D   ++SL++MY+KCG    A
Sbjct: 265 PVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEA 324

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ ++Q++VV W  +I  + + G+  EA++L+ +M    +E + +TF + + ACS++
Sbjct: 325 REVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSL 384

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
           G LE+GK VH ++ + G + D+ +  AL  +Y KCG + +A++VFD M  RNVVSW+AMI
Sbjct: 385 GALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMI 444

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGV 631
             Y  H    +A  L+K M   G++ +   +  +L ACS +G +E  + YF  + R  G 
Sbjct: 445 SAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGCLTRDCGA 504

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEK 691
              L+ Y CM  +L R+G +  A +++  MPF A    W  LL  C+ H  ++    + +
Sbjct: 505 PAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKAHNDVERGARVAE 564

Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
            L      +   Y LLSNIY   G  +E  +VR  M
Sbjct: 565 VLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKM 600



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 262/498 (52%), Gaps = 16/498 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y ++LR C   G+L +G+K+H  ++K G+ ++  +   ++  Y + G L+DA+KVFD M 
Sbjct: 73  YGNLLRDC---GELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMR 129

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC--SLRPA 215
            RD +SWS +IA Y  +    E +K++ +M    ++PD  T  ++  AC  L   +L   
Sbjct: 130 RRDSISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVG 186

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           + IH H+ R  +K D  + ++ + M++KCG L  +   F     +    W +MI  Y++S
Sbjct: 187 KEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQS 246

Query: 276 GWFQKALESFVKMLEVKE--EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
           G  ++A+E F  M       EPN IT  TVL +C+ +  L +GK VH Q++  G   ++D
Sbjct: 247 GHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGF--QFD 304

Query: 334 YLGP-ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
                +L+  YA+CG ++E  +V   + +R ++SW  +IS Y RKG  +EAL+L  +M +
Sbjct: 305 AAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGS 364

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL 451
            G+ P+  + AS LSAC ++G+L+ G  +H  +     K +  V ++L+ +Y KCG  + 
Sbjct: 365 EGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDS 424

Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
           A  +F+R++ ++VV W +MI  +  + +S EAI L+  M L  ++     + T + ACS 
Sbjct: 425 ARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQ 484

Query: 512 IGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWS 569
            G LE  +     L    G    +     +  +  + G L  A+ +   M  E   V+W 
Sbjct: 485 AGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWM 544

Query: 570 AMIDCYGMHGQLNDAASL 587
            ++     H  +   A +
Sbjct: 545 GLLAACKAHNDVERGARV 562



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 224/432 (51%), Gaps = 9/432 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           L R C  L    ++H H++  G + +      L++ Y++ GSL  ++ VFD  +  DS  
Sbjct: 76  LLRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSIS 135

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD--LGSGEKVHGR 120
           W+ +I  Y+ +    E+I LY  M  +      F + +VL ACSSLG   L  G+++H  
Sbjct: 136 WSKMIAGYVRHGLAREAIKLYKAMAIDP---DGFTFSAVLNACSSLGPRALEVGKEIHAH 192

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           + +     D  + ++++  + + G L ++R+VFD    +DV+ W+S+I +Y  +    E 
Sbjct: 193 MKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREA 252

Query: 181 LKMFHSMVREG--VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           +++F SM      VEP+ +T  ++  AC  +  L   + +H  ++    + D    NS +
Sbjct: 253 IELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLV 312

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+KCG +  A   F  +++R   SWT +IS Y R G  ++AL+ + KM     EPN I
Sbjct: 313 NMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGI 372

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  +VL +C+ LG L EGK+VH Q+   G  P+   +  AL+  Y +CG +    KV   
Sbjct: 373 TFASVLSACSSLGALEEGKAVHAQMKAAGYKPDL-AVANALVSLYGKCGSVDSARKVFDR 431

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +  RN++SW  +IS YA    S+EA++L   M   G+   SF   + L+AC   G L+  
Sbjct: 432 MKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESA 491

Query: 419 LQIHGHVIKIDC 430
               G + + DC
Sbjct: 492 RHYFGCLTR-DC 502



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 185/363 (50%), Gaps = 9/363 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +HAH+    L  D    + L+  +A+ GSL+ SR VFD  +  D   W  +I  Y  +  
Sbjct: 189 IHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGH 248

Query: 76  FEESILLYHKMIREQATI--SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
             E+I L+  M      +  +   Y +VL ACS++ DL  G++VH +++  GF  D   +
Sbjct: 249 PREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAE 308

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
            S++  Y + G + +AR+VFD M  R VVSW+ II++Y       E L ++  M  EGVE
Sbjct: 309 NSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVE 368

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
           P+ +T  S+  AC  L +L   +++H  +     K D  + N+ + +Y KCG + SA + 
Sbjct: 369 PNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKV 428

Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGW 312
           F +++ R   SWTAMIS Y      ++A++ +  M LE  +  + I   TVL +C+  G 
Sbjct: 429 FDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFI-YGTVLTACSQAGL 487

Query: 313 LREGKSVHCQIIRKGMGPEY--DYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNM 369
           L   +     + R    P    DY+  A +      G+++E E+++  +  E   ++W  
Sbjct: 488 LESARHYFGCLTRDCGAPAKLEDYVCMATV--LGRAGRLAEAEELLAVMPFEAEFVAWMG 545

Query: 370 LIS 372
           L++
Sbjct: 546 LLA 548


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 318/605 (52%), Gaps = 53/605 (8%)

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           A  S  LK F         P    ++SL E C  +  L+    +H   +++ +  +  L 
Sbjct: 26  AATSSALKSF--------SPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQ 74

Query: 235 NSFIVM--YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           N  +      + GD   A R F +I +     W  MI  Y+R  + Q  +  +++ML   
Sbjct: 75  NRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG 134

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSE 351
            +P+  T   +         L  G+ +H  +++ G+  +Y+ ++  AL++ Y  CG++  
Sbjct: 135 VKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGL--QYNVFVHTALVQMYLLCGQLDT 192

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              V     + ++++WNM+IS Y + G  +E+  L + M+   ++P + ++   LSAC  
Sbjct: 193 ARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 252

Query: 412 VGSLQLGLQIHGHVIKIDCKDE---FVQSSLIDMYSKCG--------------------- 447
           +  L+ G ++H +V   +CK E    +++++IDMY+ CG                     
Sbjct: 253 LKDLRTGKKVHSYVK--NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWT 310

Query: 448 -----FKNLAYL-----LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
                F NL  +      F+++ +K  V W +MI G+ ++    EA+ LF  M    ++ 
Sbjct: 311 TIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKP 370

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           DE T ++ + AC+++G LE G+W+   +    ++ D+++  AL DMY KCGD+  A+ +F
Sbjct: 371 DEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIF 430

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             MS+R+  +W+AMI    ++G    A  +F  ML + I P+E+T++ +L AC+H+G V+
Sbjct: 431 REMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVD 490

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +G+ YF  M    G+EP++ HY C+VDLL+R+G ++ A+++I +MP  AN  +WGALL G
Sbjct: 491 KGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 550

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+++  D+ + + K++     ++   Y LL NIYA    W++  ++R +M   G+KK P
Sbjct: 551 CRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXP 610

Query: 737 GYSTI 741
           G S I
Sbjct: 611 GCSLI 615



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/560 (28%), Positives = 283/560 (50%), Gaps = 48/560 (8%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL--CTYGEFGCLDDARKVFDKMT 157
           S+L  C S+  L   ++VH + IK G + + V+Q  ++  C   E+G    AR++FD++ 
Sbjct: 44  SLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP 100

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             ++  W+++I  Y        G+ ++  M+R GV+PD  T   L +      +L   R 
Sbjct: 101 EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 160

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HGHVL+  ++ +  +  + + MY  CG L +A   F    K    +W  +IS YN+ G 
Sbjct: 161 LHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK 220

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LG 336
           F+++   F+ M + +  P  +TL+ VL +C+ L  LR GK VH  +  K    E +  L 
Sbjct: 221 FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV--KNCKVESNLVLE 278

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS------------------------ 372
            A+I+ YA+CG+M     +  ++  R+I+SW  ++S                        
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 338

Query: 373 -------EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
                   Y R    KEALEL   MQ   + PD F++ S L+AC ++G+L+LG  I  ++
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398

Query: 426 IKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
            +   K D FV+++LIDMY KCG  + A  +F  + Q+    W +MI G   NG+  +A+
Sbjct: 399 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 458

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDM 543
           ++F  M    +  DE+T++  + AC++ G ++KG+    ++ S +G+  +I     L D+
Sbjct: 459 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 518

Query: 544 YAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE-- 600
            A+ G L+ A  V ++M  + N + W A++    ++ + + A  + KQ+L+  ++P+   
Sbjct: 519 LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGA 576

Query: 601 --VTFMNILWACSHSGSVEE 618
             V   NI  AC     + E
Sbjct: 577 VYVLLCNIYAACKRWNDLRE 596



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 249/528 (47%), Gaps = 55/528 (10%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEPDS 60
           L  +C ++ +L ++H   +  GL+ +P    R++      E G  + +R +FD   EP+ 
Sbjct: 45  LLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNL 104

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
           F+W  +I+ Y   +F +  + LY +M+R       + +P + +  +    L  G ++HG 
Sbjct: 105 FIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGH 164

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
           ++K G   +  + T+++  Y   G LD AR VFD     DV++W+ II++Y       E 
Sbjct: 165 VLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEES 224

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
            ++F  M  + V P  VT++ +  AC +L  LR  + +H +V   K++ +  L N+ I M
Sbjct: 225 RRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDM 284

Query: 241 YSKCGDLLS-------------------------------AERTFVKIEKRCTTSWTAMI 269
           Y+ CG++ S                               A   F K+ ++   SWTAMI
Sbjct: 285 YADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMI 344

Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
             Y RS  F++ALE F  M     +P+  T+++VL +CA LG L  G+ +   I R  + 
Sbjct: 345 DGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK 404

Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
            +  ++  ALI+ Y +CG + + E +   + +R+  +W  +I   A  G  ++AL++   
Sbjct: 405 NDL-FVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 463

Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQ----------IHGHVIKIDCKDEFVQSSL 439
           M    ++PD  +    LSAC + G +  G +          I  ++    C        L
Sbjct: 464 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC--------L 515

Query: 440 IDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMI--CGFYQNGNSLEAI 484
           +D+ ++ G    AY + E +  K+  ++W +++  C  Y+  +  E +
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV 563



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 205/421 (48%), Gaps = 36/421 (8%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH H+L  GL Y+    T L++ Y   G L ++R VFD   + D   W ++I  Y    
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 219

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ- 133
            FEES  L+  M  +Q   +      VL ACS L DL +G+KVH  +  C  + + V++ 
Sbjct: 220 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 279

Query: 134 ------------------------------TSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
                                         T+I+  +   G +D AR  FDKM  +D VS
Sbjct: 280 AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVS 339

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+++I  Y  +    E L++F +M    V+PD  TM+S+  AC  L +L     I  ++ 
Sbjct: 340 WTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYID 399

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           R KIK D  + N+ I MY KCGD+  AE  F ++ +R   +WTAMI     +G  +KAL+
Sbjct: 400 RNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALD 459

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII-RKGMGPEYDYLGPALIEF 342
            F  ML+    P+ IT I VL +C   G + +G+    ++  + G+ P   + G  L++ 
Sbjct: 460 MFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG-CLVDL 518

Query: 343 YAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            A  G++ E  +VI  +  + N + W  L++   R     +  E++V+ Q   L PD+ +
Sbjct: 519 LARAGRLKEAYEVIENMPIKANSIVWGALLAG-CRVYRESDMAEMVVK-QILELEPDNGA 576

Query: 402 V 402
           V
Sbjct: 577 V 577


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 156/446 (34%), Positives = 253/446 (56%), Gaps = 1/446 (0%)

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+      +L  C  LG + +G+ VH  ++       +  L   ++  YA+CG + +  +
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           +   +  +++++W  LI+ +++    ++AL L  QM   G  P+ F+++S L A G+   
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 415 LQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
           L  G Q+H   +K   +   +V S+L+DMY++CG  + A L F+ +  KS V WN++I G
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
             + G    A++L  +M     +    T+ + + AC++IG LE+GKWVH  +I  G++  
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
            +I   L DMYAK G +  A+RVFD + + +VVSW+ M+     HG   +    F+QML 
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
            GI+PNE++F+ +L ACSHSG ++EG +YF  M+ + VEPD+ HY   VDLL R G ++ 
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444

Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
           A + I  MP     ++WGALL  CR+HK +++     +       +D+G   LLSNIYA 
Sbjct: 445 AERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYAS 504

Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYS 739
            G W +  KVR +M+ +G+KK P  S
Sbjct: 505 AGRWRDVAKVRKMMKESGVKKQPACS 530



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 211/411 (51%), Gaps = 6/411 (1%)

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP-- 232
           +D   GL     + R  + PD+     L + C  L  +   R +H H++     +D    
Sbjct: 66  SDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLV 124

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           L N  + MY+KCG L  A R F ++  +   +WTA+I+ ++++   + AL  F +ML + 
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            +PN  TL ++L +      L  G  +H   ++ G      Y+G AL++ YA CG M   
Sbjct: 185 FQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV-YVGSALVDMYARCGHMDAA 243

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
           +     +  ++ +SWN LIS +ARKG  + AL LL +MQ     P  F+ +S LSAC ++
Sbjct: 244 QLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASI 303

Query: 413 GSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
           G+L+ G  +H H+IK   K   F+ ++L+DMY+K G  + A  +F+R+ +  VV WN+M+
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
            G  Q+G   E ++ F QM    +E +E++FL  + ACS+ G L++G +    +  Y V 
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVE 423

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
            D+       D+  + G L  A+R    M  E     W A++    MH  +
Sbjct: 424 PDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNM 474



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 211/398 (53%), Gaps = 7/398 (1%)

Query: 86  MIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVIQTSILCTYGEF 143
           +I+  + + ++ +Y  +L+ C+ LG +  G  VH  ++   F D   V+Q  I+  Y + 
Sbjct: 77  LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           GCLDDAR++FD+M ++D+V+W+++IA +  N    + L +F  M+R G +P+  T+ SL 
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           +A G    L P   +H   L+   +    +G++ + MY++CG + +A+  F  +  +   
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW A+IS + R G  + AL    KM     +P   T  +VL +CA +G L +GK VH  +
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHM 316

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I+ G+     ++G  L++ YA+ G + + ++V   + + +++SWN +++  A+ G+ KE 
Sbjct: 317 IKSGLK-LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDM 442
           L+   QM   G+ P+  S    L+AC + G L  GL     + K   + +     + +D+
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDL 435

Query: 443 YSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
             + G  + A      +  + +  +W +++  C  ++N
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L + CT L K+ +   +HAHL+ +  L         ++  YA+ G L  +R +FD     
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           D   W  LI  +  NN   +++LL+ +M+R     ++F   S+L+A  S   L  G ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
              +K G+     + ++++  Y   G +D A+  FD M ++  VSW+++I+ +    +  
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
             L +   M R+  +P   T  S+  AC  + +L   + +H H+++  +K+   +GN+ +
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G +  A+R F ++ K    SW  M++   + G  ++ L+ F +ML +  EPN I
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 299 TLITVLGSCAGLGWLREG 316
           + + VL +C+  G L EG
Sbjct: 393 SFLCVLTACSHSGLLDEG 410



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 161/315 (51%), Gaps = 6/315 (1%)

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           ++L    +  G    AL+L+   Q   L+PD    +  L  C  +G ++ G  +H H++ 
Sbjct: 59  DLLRKSQSDGGTGLYALDLI---QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVD 115

Query: 428 IDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
               D    +Q+ +++MY+KCG  + A  +F+ +  K +V W ++I GF QN    +A+ 
Sbjct: 116 SHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALL 175

Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
           LF QM     + +  T  + ++A  +   L+ G  +H   + YG +  +Y+ +AL DMYA
Sbjct: 176 LFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYA 235

Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
           +CG +  AQ  FD M  ++ VSW+A+I  +   G+   A  L  +M     +P   T+ +
Sbjct: 236 RCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSS 295

Query: 606 ILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           +L AC+  G++E+GK+    M   G++        ++D+ +++G I+ A ++   +  P 
Sbjct: 296 VLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPD 355

Query: 666 NGSIWGALLNGCRIH 680
             S W  +L GC  H
Sbjct: 356 VVS-WNTMLTGCAQH 369


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 318/605 (52%), Gaps = 53/605 (8%)

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
           A  S  LK F         P    ++SL E C  +  L+    +H   +++ +  +  L 
Sbjct: 5   AATSSALKSF--------SPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQ 53

Query: 235 NSFIVM--YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           N  +      + GD   A R F +I +     W  MI  Y+R  + Q  +  +++ML   
Sbjct: 54  NRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG 113

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSE 351
            +P+  T   +         L  G+ +H  +++ G+  +Y+ ++  AL++ Y  CG++  
Sbjct: 114 VKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGL--QYNVFVHTALVQMYLLCGQLDT 171

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
              V     + ++++WNM+IS Y + G  +E+  L + M+   ++P + ++   LSAC  
Sbjct: 172 ARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 231

Query: 412 VGSLQLGLQIHGHVIKIDCKDE---FVQSSLIDMYSKCG--------------------- 447
           +  L+ G ++H +V   +CK E    +++++IDMY+ CG                     
Sbjct: 232 LKDLRTGKKVHSYVK--NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWT 289

Query: 448 -----FKNLAYL-----LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
                F NL  +      F+++ +K  V W +MI G+ ++    EA+ LF  M    ++ 
Sbjct: 290 TIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKP 349

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           DE T ++ + AC+++G LE G+W+   +    ++ D+++  AL DMY KCGD+  A+ +F
Sbjct: 350 DEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIF 409

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
             MS+R+  +W+AMI    ++G    A  +F  ML + I P+E+T++ +L AC+H+G V+
Sbjct: 410 REMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVD 469

Query: 618 EGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           +G+ YF  M    G+EP++ HY C+VDLL+R+G ++ A+++I +MP  AN  +WGALL G
Sbjct: 470 KGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 529

Query: 677 CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVP 736
           CR+++  D+ + + K++     ++   Y LL NIYA    W++  ++R +M   G+KK P
Sbjct: 530 CRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTP 589

Query: 737 GYSTI 741
           G S I
Sbjct: 590 GCSLI 594



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/560 (28%), Positives = 283/560 (50%), Gaps = 48/560 (8%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL--CTYGEFGCLDDARKVFDKMT 157
           S+L  C S+  L   ++VH + IK G + + V+Q  ++  C   E+G    AR++FD++ 
Sbjct: 23  SLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP 79

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
             ++  W+++I  Y        G+ ++  M+R GV+PD  T   L +      +L   R 
Sbjct: 80  EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 139

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           +HGHVL+  ++ +  +  + + MY  CG L +A   F    K    +W  +IS YN+ G 
Sbjct: 140 LHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK 199

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LG 336
           F+++   F+ M + +  P  +TL+ VL +C+ L  LR GK VH  +  K    E +  L 
Sbjct: 200 FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV--KNCKVESNLVLE 257

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS------------------------ 372
            A+I+ YA+CG+M     +  ++  R+I+SW  ++S                        
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 317

Query: 373 -------EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
                   Y R    KEALEL   MQ   + PD F++ S L+AC ++G+L+LG  I  ++
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377

Query: 426 IKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
            +   K D FV+++LIDMY KCG  + A  +F  + Q+    W +MI G   NG+  +A+
Sbjct: 378 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 437

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDM 543
           ++F  M    +  DE+T++  + AC++ G ++KG+    ++ S +G+  +I     L D+
Sbjct: 438 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 497

Query: 544 YAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE-- 600
            A+ G L+ A  V ++M  + N + W A++    ++ + + A  + KQ+L+  ++P+   
Sbjct: 498 LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGA 555

Query: 601 --VTFMNILWACSHSGSVEE 618
             V   NI  AC     + E
Sbjct: 556 VYVLLCNIYAACKRWNDLRE 575



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 250/530 (47%), Gaps = 55/530 (10%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIE--SYAEMGSLRSSRLVFDTFKEP 58
           + L  +C ++ +L ++H   +  GL+ +P    R++      E G  + +R +FD   EP
Sbjct: 22  ISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEP 81

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           + F+W  +I+ Y   +F +  + LY +M+R       + +P + +  +    L  G ++H
Sbjct: 82  NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLH 141

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G ++K G   +  + T+++  Y   G LD AR VFD     DV++W+ II++Y       
Sbjct: 142 GHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFE 201

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E  ++F  M  + V P  VT++ +  AC +L  LR  + +H +V   K++ +  L N+ I
Sbjct: 202 ESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMI 261

Query: 239 VMYSKCGDLLS-------------------------------AERTFVKIEKRCTTSWTA 267
            MY+ CG++ S                               A   F K+ ++   SWTA
Sbjct: 262 DMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTA 321

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           MI  Y RS  F++ALE F  M     +P+  T+++VL +CA LG L  G+ +   I R  
Sbjct: 322 MIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK 381

Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
           +  +  ++  ALI+ Y +CG + + E +   + +R+  +W  +I   A  G  ++AL++ 
Sbjct: 382 IKNDL-FVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMF 440

Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ----------IHGHVIKIDCKDEFVQS 437
             M    ++PD  +    LSAC + G +  G +          I  ++    C       
Sbjct: 441 SNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC------- 493

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMI--CGFYQNGNSLEAI 484
            L+D+ ++ G    AY + E +  K+  ++W +++  C  Y+  +  E +
Sbjct: 494 -LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV 542



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 205/421 (48%), Gaps = 36/421 (8%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           +LH H+L  GL Y+    T L++ Y   G L ++R VFD   + D   W ++I  Y    
Sbjct: 139 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 198

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ- 133
            FEES  L+  M  +Q   +      VL ACS L DL +G+KVH  +  C  + + V++ 
Sbjct: 199 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 258

Query: 134 ------------------------------TSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
                                         T+I+  +   G +D AR  FDKM  +D VS
Sbjct: 259 AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVS 318

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
           W+++I  Y  +    E L++F +M    V+PD  TM+S+  AC  L +L     I  ++ 
Sbjct: 319 WTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYID 378

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           R KIK D  + N+ I MY KCGD+  AE  F ++ +R   +WTAMI     +G  +KAL+
Sbjct: 379 RNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALD 438

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII-RKGMGPEYDYLGPALIEF 342
            F  ML+    P+ IT I VL +C   G + +G+    ++  + G+ P   + G  L++ 
Sbjct: 439 MFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG-CLVDL 497

Query: 343 YAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            A  G++ E  +VI  +  + N + W  L++   R     +  E++V+ Q   L PD+ +
Sbjct: 498 LARAGRLKEAYEVIENMPIKANSIVWGALLAG-CRVYRESDMAEMVVK-QILELEPDNGA 555

Query: 402 V 402
           V
Sbjct: 556 V 556


>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
 gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
          Length = 611

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 192/572 (33%), Positives = 304/572 (53%), Gaps = 34/572 (5%)

Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS-- 249
           + P+  T+LSL   C  L   + +   H  +L     I     N+ I+  SK  D     
Sbjct: 2   IHPN--TILSLLPKCKTLLQFKTS---HALILTTPTTI-----NTKIIPLSKLIDFCVDS 51

Query: 250 --------AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
                   A   F +I       + +MI  Y +S     +L  + +ML+    P+  T  
Sbjct: 52  HFDEYFNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFP 111

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
            VL +C+ +     GK VH  I++ G      Y+   L+  Y EC  M    KV   I +
Sbjct: 112 FVLKACSFIYDQVSGKCVHSCILKSGFEANV-YVATGLLNMYVECKNMESGLKVFDKIPK 170

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
            N+++W  LI+ Y      +EALE+  +M  WG+  +  ++ ++L AC     +  G  +
Sbjct: 171 WNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWV 230

Query: 422 HGHVIKIDCKDEFV---------QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
           H  V K    D FV          +++++MY+KCG+ N+A  LF ++ ++++V WN MI 
Sbjct: 231 HERVCKAG-YDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMIN 289

Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
            + Q     EA+ LF  M  N    D+ TFL+ +  C+    L  G+ VH  L+   + K
Sbjct: 290 AYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAK 349

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFD-SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
           DI + TAL DMYAK G+L +AQ++F+ S+ +++VV W++MI+   +HG  N+A SLF+ M
Sbjct: 350 DIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIM 409

Query: 592 L-DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSG 649
             DS + P+ +T++ +L+ACSH G VEE +  FN M + +G+ P+ +HY+CMVDLLSR+G
Sbjct: 410 QEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAG 469

Query: 650 DIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSN 709
               A K++ +M    N +IWGALLNGC+IH+ I V   ++  L+      +G Y LLSN
Sbjct: 470 HFREAEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSN 529

Query: 710 IYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           IYA  G W+E  + R +M+   + K  G+S++
Sbjct: 530 IYANSGKWEEVNRTRKMMKHKRIAKTIGHSSV 561



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 226/447 (50%), Gaps = 21/447 (4%)

Query: 48  SRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS 107
           + L+F     P+ +++  +IK Y  +N    S+ LY +M++   +  +F +P VL+ACS 
Sbjct: 60  ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSF 119

Query: 108 LGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSI 167
           + D  SG+ VH  I+K GF+ +  + T +L  Y E   ++   KVFDK+   +VV+W+ +
Sbjct: 120 IYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCL 179

Query: 168 IASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
           I  Y  N    E L++F  M R GVE + VTM++   AC     +   R +H  V +   
Sbjct: 180 INGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGY 239

Query: 228 -------KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
                    +  L  + + MY+KCG L  A   F K+ +R   +W  MI+ YN+   + +
Sbjct: 240 DPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNE 299

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           AL  F  ML     P+  T ++VL  CA    L  G++VH  +++  M  +   L  AL+
Sbjct: 300 ALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIA-LATALL 358

Query: 341 EFYAECGKMSECEKVI-HAIGERNILSWNMLISEYARKGMSKEALELLVQMQT-WGLMPD 398
           + YA+ G++   +K+  +++ +++++ W  +I+  A  G   EAL L   MQ    L+PD
Sbjct: 359 DMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPD 418

Query: 399 SFSVASSLSACGNVGSL-----QLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAY 453
             +    L AC +VG +     Q  L    + I  + K+ +  S ++D+ S+ G    A 
Sbjct: 419 HITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPE-KEHY--SCMVDLLSRAGHFREAE 475

Query: 454 LLFERIQ-QKSVVMWNSMI--CGFYQN 477
            L E +  + ++ +W +++  C  ++N
Sbjct: 476 KLMETMSIRPNIAIWGALLNGCQIHEN 502



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 184/368 (50%), Gaps = 12/368 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           +H+ +L +G   +   +T L+  Y E  ++ S   VFD   + +   W  LI  Y+ N+ 
Sbjct: 129 VHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQ 188

Query: 76  FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD-------K 128
             E++ ++ +M R     +     + L AC+   D+ +G  VH R+ K G+D        
Sbjct: 189 PREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNS 248

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           + ++ T+I+  Y + G L+ AR++F+KM  R++V+W+ +I +Y      +E L +F  M+
Sbjct: 249 NVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYML 308

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
             G  PD  T LS+   C   C L    ++H ++L+  +  D  L  + + MY+K G+L 
Sbjct: 309 ANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELG 368

Query: 249 SAERTFVK-IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGS 306
           SA++ F   +EK+    WT+MI+     G   +AL  F  M E     P+ IT I VL +
Sbjct: 369 SAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFA 428

Query: 307 CAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NI 364
           C+ +G + E  K  +      G+ PE ++    +++  +  G   E EK++  +  R NI
Sbjct: 429 CSHVGLVEEAQKQFNLMTKSYGILPEKEHYS-CMVDLLSRAGHFREAEKLMETMSIRPNI 487

Query: 365 LSWNMLIS 372
             W  L++
Sbjct: 488 AIWGALLN 495


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/551 (33%), Positives = 289/551 (52%), Gaps = 15/551 (2%)

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           L  A  +  SLR    +HG + +     D  LGN+ I MY+KCG+L  A   F  +  R 
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN 282

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGKSVH 320
             SWTA++  + + G     L    +M    E  PN  TL   L +C     +  G  +H
Sbjct: 283 VVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIH 342

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGM 379
              +R G    Y  +  +L+  Y++ G++ +  +V    G  R + +WN +IS YA  G 
Sbjct: 343 GLCVRTGYEEHY-VVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGH 401

Query: 380 SKEALELLVQMQTWGL------MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI---DC 430
            ++AL +  +M+           PD F+ AS L ACG +G+ + G Q+H  +        
Sbjct: 402 GRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTA 461

Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            +  +  +L+DMY KCG   +A  +FER+++K+ + W +++ G  Q G  +EA+ LF + 
Sbjct: 462 SNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRF 521

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
           + +    D     + +   ++   +E+G+ VH   +      D+    ++ DMY KCG  
Sbjct: 522 WRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLP 581

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
             A+R+F  +  RNVVSW+ MI+  G HG   +A ++F++M   G++P+EVT++ +L AC
Sbjct: 582 DEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSAC 641

Query: 611 SHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
           SH+G V+E + YF+ +R    V P  +HYACMVDLL R+G++  A  +I +MP      +
Sbjct: 642 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 701

Query: 670 WGALLNGCRIHKRIDVMKTI-EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
           W  LL+ CR+HK + V +   +  L++ G N   Y T LSN++AE G W E  KVR  M 
Sbjct: 702 WQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVT-LSNVFAEAGAWRECHKVRDAMR 760

Query: 729 VTGLKKVPGYS 739
             GLKK  G S
Sbjct: 761 RRGLKKQGGCS 771



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 263/547 (48%), Gaps = 19/547 (3%)

Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
           +LRA +    L  G ++HG + K GF  D ++  +++  Y + G LD A +VF  M  R+
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN 282

Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVE--PDFVTMLSLAEACGELCSLRPARSI 218
           VVSW++++  +  + D +  L++   M R   E  P+  T+ +  +AC     +     I
Sbjct: 283 VVSWTALMVGFLQHGDATGCLRLLGEM-RAASEAAPNEYTLSASLKACCVTEDMGAGVGI 341

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF-VKIEKRCTTSWTAMISCYNRSGW 277
           HG  +R   +    + +S +++YSK G +  A R F      R   +W AMIS Y  +G 
Sbjct: 342 HGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGH 401

Query: 278 FQKALESFVKML------EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            + AL  F +M       E + +P+  T  ++L +C GLG  REG  VH  +   G    
Sbjct: 402 GRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTA 461

Query: 332 YD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
            +  L  AL++ Y +CG++    +V   +  +N + W  ++  +A++G   EALEL  + 
Sbjct: 462 SNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRF 521

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFK 449
              G   D+  ++S +    +   ++ G Q+H + +K     D    +S++DMY KCG  
Sbjct: 522 WRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLP 581

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A  +F  I  ++VV W +MI G  ++G   EA+ +F +M    +E DEVT+L  + AC
Sbjct: 582 DEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSAC 641

Query: 510 SNIGQLEK-GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVS 567
           S+ G +++  ++         VR        + D+  + G+L+ A+ +  +M  E  V  
Sbjct: 642 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 701

Query: 568 WSAMIDCYGMHGQLNDAASLFKQML--DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           W  ++    +H  +         +L  D     N VT  N+    + +G+  E     +A
Sbjct: 702 WQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVF---AEAGAWRECHKVRDA 758

Query: 626 MRIFGVE 632
           MR  G++
Sbjct: 759 MRRRGLK 765



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 201/416 (48%), Gaps = 11/416 (2%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++LR   +LH  L   G   D      LI+ YA+ G L  +  VF   ++ +   W  L+
Sbjct: 231 SSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALM 290

Query: 68  KCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
             ++ +      + L  +M    +A  + +   + L+AC    D+G+G  +HG  ++ G+
Sbjct: 291 VGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGY 350

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFD-KMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
           ++  V+ +S++  Y + G + DAR+VFD     R + +W+++I+ Y       + L +F 
Sbjct: 351 EEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFR 410

Query: 186 SMV------REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI--DGPLGNSF 237
            M        +  +PD  T  SL +ACG L + R    +H  +         +  L  + 
Sbjct: 411 EMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGAL 470

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
           + MY KCG L  A + F ++E++    WT ++  + + G   +ALE F +        + 
Sbjct: 471 VDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADA 530

Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
             L +++G  A    + +G+ VHC  ++   G +    G ++++ Y +CG   E E++  
Sbjct: 531 HVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVS-AGNSIVDMYLKCGLPDEAERMFR 589

Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            I  RN++SW  +I+   + G+ +EA+ +  +M+  G+ PD  +  + LSAC + G
Sbjct: 590 EIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAG 645



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 167/368 (45%), Gaps = 12/368 (3%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF-MWAVLIKCYMWNN 74
           +H   + TG       ++ L+  Y++ G +  +R VFD          W  +I  Y    
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAG 400

Query: 75  FFEESILLYHKMI------REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD- 127
              +++L++ +M        +Q     F + S+L+AC  LG    G +VH  +   GF  
Sbjct: 401 HGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFST 460

Query: 128 -KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
             + ++  +++  Y + G L  A +VF+++  ++ + W++++  +     V E L++F  
Sbjct: 461 ASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRR 520

Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
             R G   D   + S+     +   +   R +H + ++     D   GNS + MY KCG 
Sbjct: 521 FWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGL 580

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
              AER F +I  R   SWT MI+   + G  ++A+  F +M     EP+ +T + +L +
Sbjct: 581 PDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSA 640

Query: 307 CAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNI 364
           C+  G + E +     I R + + P+ ++    +++     G++ E   +I  +  E  +
Sbjct: 641 CSHAGLVDECRRYFSCIRRDRTVRPKAEHYA-CMVDLLGRAGELREARDLIRTMPMEPTV 699

Query: 365 LSWNMLIS 372
             W  L+S
Sbjct: 700 GVWQTLLS 707



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 11/271 (4%)

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
           +A  L A     SL+ G+Q+HG + K+    D  + ++LIDMY+KCG  ++A  +F  ++
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGK 519
            ++VV W +++ GF Q+G++   + L  +M        +E T   +++AC     +  G 
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMH 578
            +H   +  G  +   + ++L  +Y+K G +  A+RVFD     R + +W+AMI  Y   
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 579 GQLNDAASLFKQML------DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI--FG 630
           G   DA  +F++M       +   +P+E TF ++L AC   G+  EG     AM    F 
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
              +      +VD+  + G +  A ++   +
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERL 490


>gi|15227389|ref|NP_179312.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|4584344|gb|AAD25139.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330251504|gb|AEC06598.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 206/653 (31%), Positives = 334/653 (51%), Gaps = 33/653 (5%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDK 155
           F++P V +AC+ L  L  G  +    +KCG           LC+           + FD 
Sbjct: 46  FVFPIVFKACAKLSWLFQGNSIADFYMKCG----------DLCS---------GLREFDC 86

Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
           M SRD VSW+ I+    D     EGL  F  +   G EP+  T++ +  AC  L      
Sbjct: 87  MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDG 144

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             IHG+V+R        + NS + MY+   D LSA + F ++ +R   SW+ +I  Y +S
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQS 203

Query: 276 GWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
                 L+ F +M+ E K EP+ +T+ +VL +C  +  +  G+SVH   IR+G      +
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263

Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
           +  +LI+ Y++   +    +V      RNI+SWN +++ +       EALE+   M    
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323

Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAY 453
           +  D  +V S L  C           IHG +I+   + +E   SSLID Y+ C   + A 
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383

Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
            + + +  K VV  ++MI G    G S EAI++F  M       + +T ++ + ACS   
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSA 440

Query: 514 QLEKGKWVHHKLISYGVR-KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
            L   KW H   I   +   DI + T++ D YAKCG ++ A+R FD ++E+N++SW+ +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             Y ++G  + A +LF +M   G  PN VT++  L AC+H G V++G   F +M     +
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 560

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMP--FPANGSIWGALLNGC--RIHKRIDVMKT 688
           P LQHY+C+VD+LSR+G+I+ A ++I ++P    A  S WGA+L+GC  R  K I   + 
Sbjct: 561 PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEV 620

Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + + L +     +GY  L S+ +A E +W++   +R +++   ++ V GYS +
Sbjct: 621 VAEVLELEPLCSSGYL-LASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 273/528 (51%), Gaps = 11/528 (2%)

Query: 39  YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIY 98
           Y + G L S    FD     DS  W V++   +   F EE +  + K+       +    
Sbjct: 71  YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
             V+ AC SL     GEK+HG +I+ GF     +Q SILC Y +   L  ARK+FD+M+ 
Sbjct: 131 VLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSE 187

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARS 217
           RDV+SWS +I SY  + +   GLK+F  MV E   EPD VT+ S+ +AC  +  +   RS
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRS 247

Query: 218 IHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
           +HG  +RR   + D  + NS I MYSK  D+ SA R F +   R   SW ++++ +  + 
Sbjct: 248 VHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQ 307

Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG 336
            + +ALE F  M++   E + +T++++L  C         KS+H  IIR+G       L 
Sbjct: 308 RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALS 367

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +LI+ Y  C  + +   V+ ++  ++++S + +IS  A  G S EA+ +   M+     
Sbjct: 368 -SLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---T 423

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYL 454
           P++ +V S L+AC     L+     HG  I+  +   D  V +S++D Y+KCG   +A  
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
            F++I +K+++ W  +I  +  NG   +A+ LF +M       + VT+L A+ AC++ G 
Sbjct: 484 TFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGL 543

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
           ++KG  +   ++    +  +   + + DM ++ G++ TA  +  ++ E
Sbjct: 544 VKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPE 591



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 245/465 (52%), Gaps = 10/465 (2%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H +++ +G          ++  YA+  SL S+R +FD   E D   W+V+I+ Y+ + 
Sbjct: 146 KIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSK 204

Query: 75  FFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV-I 132
                + L+ +M+ E  T  + +   SVL+AC+ + D+  G  VHG  I+ GFD  DV +
Sbjct: 205 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFV 264

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
             S++  Y +   +D A +VFD+ T R++VSW+SI+A +  N    E L+MFH MV+E V
Sbjct: 265 CNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAV 324

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
           E D VT++SL   C       P +SIHG ++RR  + +    +S I  Y+ C  +  A  
Sbjct: 325 EVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGT 384

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
               +  +   S + MIS    +G   +A+  F  M   ++ PN IT+I++L +C+    
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSAD 441

Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
           LR  K  H   IR+ +      +G ++++ YA+CG +    +    I E+NI+SW ++IS
Sbjct: 442 LRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIIS 501

Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD 432
            YA  G+  +AL L  +M+  G  P++ +  ++LSAC + G ++ GL I   +++ D K 
Sbjct: 502 AYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKP 561

Query: 433 EFVQ-SSLIDMYSKCGFKNLAYLLFERIQQK---SVVMWNSMICG 473
                S ++DM S+ G  + A  L + + +        W +++ G
Sbjct: 562 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 199/640 (31%), Positives = 333/640 (52%), Gaps = 21/640 (3%)

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFG--CLDDARKVFDKM--TSRDVVSWSSIIA 169
           GE +H   +K G      +  S++  Y       L  A  VFD +   +RDV SW+S++ 
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90

Query: 170 SYFDNADVSEGLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIK 228
               +  + + L  F SM+    V P   +  +   A     S     + H        K
Sbjct: 91  PLSRHRPL-DALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHA----LACK 145

Query: 229 IDGPLGN-----SFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
           I   + N     S + MY K G +  A R F  + +R + SW+ M++ Y      ++A +
Sbjct: 146 IPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFD 205

Query: 284 SFVKMLE--VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIE 341
            F  MLE    E+   +    +      LG L  G+ +H  I++ G+  ++  +  +L+ 
Sbjct: 206 LFRLMLEECPSEKSEFVATAVLSAVSVPLGLLM-GEQMHGLIVKDGL-LDFVSVENSLVT 263

Query: 342 FYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
            YA+ G M     V  +  ERN ++W+ +I+ YA+ G +  A+ +  QM   G  P  F+
Sbjct: 264 MYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFT 323

Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ 460
               L+A  ++G+L +G Q HG ++K+  + + +V+S+L+DMY+KCG    A   F+++ 
Sbjct: 324 FVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLY 383

Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
           +  +V+W +M+ G  QNG   EA+ L+ +M    +   + T  + ++AC+ I  LE GK 
Sbjct: 384 EVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQ 443

Query: 521 VHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           +H +++ YG+     + +AL+ MY+KCG+L+    VF  + +R+V++W+++I  +  +G 
Sbjct: 444 LHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGC 503

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYA 639
            N A  LF++M   G  P+ +TF+NIL ACSH G V+ G  YF+ M + +G+ P L HYA
Sbjct: 504 GNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYA 563

Query: 640 CMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTN 699
           CMVD+LSR+G ++ A   I S+       +W  +L  CR  +  DV     + L   GT 
Sbjct: 564 CMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTR 623

Query: 700 DNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
           D+  Y LLSNIYA +  W++  +VR +M + G+ K PG S
Sbjct: 624 DSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCS 663



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 206/387 (53%), Gaps = 2/387 (0%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QA 91
           T L+  Y ++G +  +R +FD   + +SF W+ ++  Y      EE+  L+  M+ E  +
Sbjct: 157 TSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPS 216

Query: 92  TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
             S F+  +VL A S    L  GE++HG I+K G      ++ S++  Y + GC+  A  
Sbjct: 217 EKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFH 276

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           VF+    R+ ++WS++I  Y  N +    + MF  M   G  P   T + +  A  +L +
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
           L   +  HG +++   ++   + ++ + MY+KCG +  A+  F ++ +     WTAM+S 
Sbjct: 337 LAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSG 396

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           + ++G  ++AL  + +M +    P+  T+ + L +CAG+  L  GK +H QI++ G+G  
Sbjct: 397 HVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLG 456

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
              +G AL   Y++CG + +   V   I +R++++WN +IS +++ G    AL+L  +M+
Sbjct: 457 AP-VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMK 515

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLG 418
             G +PD+ +  + L AC ++G +  G
Sbjct: 516 MEGTIPDNITFINILCACSHMGLVDRG 542



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/567 (25%), Positives = 260/567 (45%), Gaps = 35/567 (6%)

Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD--LLSAERT 253
           F+ +L    +C      R   ++H   L+       P+ NS I  YS      L +A   
Sbjct: 17  FIELLRRRASCP-----RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAV 71

Query: 254 FVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGL 310
           F  I    R   SW ++++  +R      AL  F  ML      P+  +      + A  
Sbjct: 72  FDDIPPAARDVASWNSLLNPLSRHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARA 130

Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
                G + H    +        Y+  +L+  Y + G +S+  ++   + +RN  SW+ +
Sbjct: 131 ASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTM 190

Query: 371 ISEYARKGMSKEALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           ++ YA +  S+EA +L  + ++        F   + LSA      L +G Q+HG ++K  
Sbjct: 191 VAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDG 250

Query: 430 CKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
             D   V++SL+ MY+K G    A+ +FE  ++++ + W++MI G+ QNG +  A+++F 
Sbjct: 251 LLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFS 310

Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
           QM+       E TF+  + A S++G L  GK  H  ++  G    IY+ +AL DMYAKCG
Sbjct: 311 QMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCG 370

Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
            +  A+  FD + E ++V W+AM+  +  +G+  +A +L+ +M   GI P++ T  + L 
Sbjct: 371 CIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLR 430

Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP----FP 664
           AC+   ++E GK     +  +G+       + +  + S+ G++E    +   +P      
Sbjct: 431 ACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA 490

Query: 665 ANGSIWGALLNGCRIHKRIDVMKTIEKELSVT---------------GTNDNG--YYTLL 707
            N  I G   NGC  +  +D+ + ++ E ++                G  D G  Y++L+
Sbjct: 491 WNSIISGFSQNGCG-NGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLM 549

Query: 708 SNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           +  Y      D +  +  I+   G+ K
Sbjct: 550 TKDYGLTPRLDHYACMVDILSRAGMLK 576



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 183/346 (52%), Gaps = 2/346 (0%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  ++  GL         L+  YA+ G + ++  VF++ +E +S  W+ +I  Y  N 
Sbjct: 241 QMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNG 300

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
             + ++ ++ +M     T + F +  VL A S LG L  G++ HG ++K GF+    +++
Sbjct: 301 EADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKS 360

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           +++  Y + GC+ DA++ FD++   D+V W+++++ +  N +  E L ++  M +EG+ P
Sbjct: 361 ALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIP 420

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
              T+ S   AC  + +L P + +H  +++  + +  P+G++   MYSKCG+L      F
Sbjct: 421 SKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVF 480

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
            +I  R   +W ++IS ++++G    AL+ F +M      P+ IT I +L +C+ +G + 
Sbjct: 481 RRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD 540

Query: 315 EGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
            G      + +  G+ P  D+    +++  +  G + E +  I +I
Sbjct: 541 RGWEYFSLMTKDYGLTPRLDHYA-CMVDILSRAGMLKEAKDFIESI 585


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 217/727 (29%), Positives = 355/727 (48%), Gaps = 43/727 (5%)

Query: 25  LHYDPPASTRLIESYAEMGSLR-SSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
            H  P +S + IES+A +GS+  SS  VF  +                 + F  ES+   
Sbjct: 20  FHMLPFSSRQSIESFATLGSVSLSSSQVFPAYS----------------STFLLESV--- 60

Query: 84  HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
                         Y  ++++ +  G L  G+ VH  +IK  F     +Q ++L  Y + 
Sbjct: 61  -------------DYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKC 107

Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
           G    A K+FDKM+  ++V+++S+I+ Y   +++ + + +F    R G++ D  T     
Sbjct: 108 GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGAL 167

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
            AC +  +L   + IHG +L   +     L NS I MYSKCG +  A   F   +K    
Sbjct: 168 TACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGV 227

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL--GWLREGKSVHC 321
           SW ++I+ Y ++G +++ L    KM +     N  TL + L +C+    G    G  +H 
Sbjct: 228 SWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHD 287

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN-----MLISEYAR 376
             I+ G+  +   +G AL++ YA+ G + +  ++   + ++N++ +N     +L  E   
Sbjct: 288 HAIKLGLHLDV-VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 346

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFV 435
              + +AL L  +M++ G+ P  F+ +S L AC  V   +   Q+H  + K     DE++
Sbjct: 347 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYI 406

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            S LID+YS  G    A L F  I   ++V   +MI G+ QNG    A++LF+++     
Sbjct: 407 GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEE 466

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           + DE    T + +C+N+G L  G+ +       G+ +      +   MYAK GDL  A  
Sbjct: 467 KPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 526

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
            F  M   ++VSWS MI     HG   +A   F+ M   GI+PN   F+ +L ACSH G 
Sbjct: 527 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 586

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           VEEG  YF+ M + + ++  ++H  C+VDLL R+G +  A  +I  + F     +W ALL
Sbjct: 587 VEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALL 646

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           + CRIHK     + + +++       +  Y LL NIY + GN     KVR++ME   +KK
Sbjct: 647 SACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKK 706

Query: 735 VPGYSTI 741
            PG S I
Sbjct: 707 EPGLSWI 713



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 156/607 (25%), Positives = 291/607 (47%), Gaps = 16/607 (2%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L +S T   KL     +H+H++ T           L+  Y + G  RS+  +FD   +
Sbjct: 63  VKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSK 122

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   +  LI  Y+  +  ++ ++L+ K  R    +  +     L ACS  G+L +G+ +
Sbjct: 123 SNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMI 182

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG I+  G     V+  S++  Y + G +D AR +FD     D VSW+S+IA Y  N   
Sbjct: 183 HGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKY 242

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGEL---CSLRPARSIHGHVLRRKIKIDGPLG 234
            E L +   M + G+  +  T+ S  +AC      C +     +H H ++  + +D  +G
Sbjct: 243 EELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMF-GTMLHDHAIKLGLHLDVVVG 301

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ-----KALESFVKML 289
            + + MY+K G L  A + F ++  +    + AM++   +    +     KAL  F +M 
Sbjct: 302 TALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMK 361

Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
               +P++ T  ++L +C  +   +  K VH  + + G+  + +Y+G  LI+ Y+  G M
Sbjct: 362 SCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSD-EYIGSILIDLYSVLGSM 420

Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
            +     ++I    I+    +I  Y + G  + AL L  ++ T+   PD F  ++ +S+C
Sbjct: 421 MDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSC 480

Query: 410 GNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            N+G L+ G QI GH  K+   +    Q+S I MY+K G    A L F++++   +V W+
Sbjct: 481 ANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWS 540

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLIS 527
           +MIC   Q+G+++EA+  F  M    +E +   FL  + ACS+ G +E+G ++       
Sbjct: 541 TMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKD 600

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAAS 586
           Y ++  +     + D+  + G L  A+ +   +  E   V W A++    +H     A  
Sbjct: 601 YKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQR 660

Query: 587 LFKQMLD 593
           + +++++
Sbjct: 661 VAQKVIE 667


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 171/547 (31%), Positives = 296/547 (54%), Gaps = 7/547 (1%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T+ SL   C +  +LR   S+H  VL+   + D  + N  + MY+KCG    A + F ++
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            ++   SW+AMIS Y+++G  Q A++ + +M  V   PN     +V+ +CA L  +  G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H + ++ G      ++  +LI  Y +C + S+   V     E N +S+N LI+ +   
Sbjct: 122 KIHSRSLKFGY-ESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQ 436
              +  LE    M+  GL+PD F+    L  C    +L+ G ++H   +K++     F+ 
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-L 495
           + +I MYS+      A   F  I++K V+ WN++I       +  + + +F  M     +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D+ TF +A+ AC+ +  +  GK +H  L+   + +D+ +  AL +MYAKCG +  A  
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +F  M   N+VSW+ +I  +G HG    A  LF+QM  SGI+P+ VTF+ +L AC+H+G 
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V++G+ YFN+M   +G+ PD++H++C++D+L R+G +  A + +   PF  +  +  +LL
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           +  R+H  + + + + K L          Y LLSN+YA +G WD   + R  ++ +GLKK
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540

Query: 735 VPGYSTI 741
            PG+S I
Sbjct: 541 EPGHSLI 547



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 229/459 (49%), Gaps = 7/459 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L  CS    L  G  +H  ++K G   D  +   +L  Y + G    AR+VFD+M  +
Sbjct: 8   SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEK 67

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           ++VSWS++I+ Y    +    + ++  M    + P+     S+  AC  L ++   + IH
Sbjct: 68  NLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIH 124

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              L+   +    + NS I MY KC     A   F    +    S+ A+I+ +  +   +
Sbjct: 125 SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLE 184

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           + LE F  M +    P+    + VLG C     L+ G  +HCQ ++  +     ++G  +
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST-PFIGNVI 243

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPD 398
           I  Y+E   + E EK    I E++++SWN LI+  +      + L +   M +   + PD
Sbjct: 244 ITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPD 303

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+  S+L+AC  + S+  G QIH H+++    +D  V ++L++MY+KCG    AY +F 
Sbjct: 304 DFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFS 363

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           ++   ++V WN++I GF  +G    A+ LF QM  + +  D VTF+  + AC++ G ++K
Sbjct: 364 KMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDK 423

Query: 518 GKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           G+   + +  +YG+  DI   + L DM  + G L  A+ 
Sbjct: 424 GQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEE 462



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 201/420 (47%), Gaps = 8/420 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   C+  + L     LHA +L TG   D   S  ++  YA+ G    +R VFD   E +
Sbjct: 9   LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y      + +I LY +M       + +++ SV+ AC+SL  +  G+K+H 
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHS 125

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R +K G++    +  S++  Y +     DA  VF      + VS++++I  + +N  +  
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           GL+ F  M ++G+ PD    + +   C    +L+    +H   ++  +     +GN  I 
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIIT 245

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
           MYS+   +  AE+ F  IE++   SW  +I+  +      K L  F  M  E    P+  
Sbjct: 246 MYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDF 305

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  + L +CAGL  +  GK +H  ++R  +  +   +G AL+  YA+CG +     +   
Sbjct: 306 TFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLG-VGNALVNMYAKCGCIGYAYDIFSK 364

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +   N++SWN +I+ +   G+ + A+EL  QM   G+ PDS +    L+AC + G +  G
Sbjct: 365 MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG 424


>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 201/640 (31%), Positives = 322/640 (50%), Gaps = 55/640 (8%)

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR---EGVEPDFVT--ML 200
           L+ A++ F  + +  + S  + +  +    ++ +  K   S++R        D +   + 
Sbjct: 120 LESAQETFTSVDASMIDSLLTSLKEFTSRGNLLDAFKTV-SLIRLHASSASQDLIVHPIS 178

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           SL  +C ++ SL   R +HGH++    +    L    +  YS    L+ A          
Sbjct: 179 SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNIL 238

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
               W  +IS Y R+G+ QKAL ++ +M++    P+  T  +VL +C     L  GK VH
Sbjct: 239 HPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH 298

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            + I          +  ALI  Y +CGK+     +   I ER+ +SWN +IS YA  GM 
Sbjct: 299 -ESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 357

Query: 381 KEA-----------------------------------LELLVQMQTWGLMPDSFSVASS 405
            EA                                   LELL QM+  G   DS ++   
Sbjct: 358 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIG 417

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
           L AC ++G  +LG +IH   I+  C  E   V++SLI MYS+C     AYLLF+ ++ KS
Sbjct: 418 LGACSHIGDAKLGKEIHSFAIR-SCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKS 476

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
           ++ WNS+I G      S EA  L  +M L+ +E + VT  + +  C+ +  L+ GK  H 
Sbjct: 477 LISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFH- 535

Query: 524 KLISYGVRKDIYID-----TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
               Y  R++ + D      AL DMYA+ G +  A+RVFD + ER+ +++++MI  YGM 
Sbjct: 536 ---CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQ 592

Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQH 637
           G+   A  LF++M +  IKP+ +T + +L ACSHSG V +G+  F  MR ++G+ P L+H
Sbjct: 593 GEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEH 652

Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
           +ACM DL  R+G +  A ++I +MP+    ++W  L+  CRIH+  ++ +   ++L    
Sbjct: 653 FACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMK 712

Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPG 737
             + GYY L++N+YA  G W++  KVR  M   G++K PG
Sbjct: 713 PENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPG 752



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 273/592 (46%), Gaps = 45/592 (7%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H  P AS   +ES  E  +   + ++         F      +  + + F   S++  H 
Sbjct: 110 HVHPSASCNALESAQETFTSVDASMIDSLLTSLKEFT----SRGNLLDAFKTVSLIRLHA 165

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
               Q  I + I  S+L +C+ +  L  G ++HG II  GF++  ++   ++  Y  F  
Sbjct: 166 SSASQDLIVHPI-SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNL 224

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L DA  + +         W+ +I+SY  N    + L  +  MV++G+ PD  T  S+ +A
Sbjct: 225 LVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKA 284

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
           CGE   L   + +H  +   +IK    + N+ I MY KCG +  A   F KI +R   SW
Sbjct: 285 CGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSW 344

Query: 266 TAMISCYN-----------------------------------RSGWFQKALESFVKMLE 290
            +MIS Y                                    R+G ++ ALE   +M +
Sbjct: 345 NSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRK 404

Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
                + + LI  LG+C+ +G  + GK +H   IR   G E D +  +LI  Y+ C  + 
Sbjct: 405 XGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFG-EVDTVKNSLITMYSRCKDLK 463

Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
               +   +  ++++SWN +IS       S+EA  LL +M   G+ P+  ++AS L  C 
Sbjct: 464 HAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCA 523

Query: 411 NVGSLQLGLQIHGHVIKI-DCKDEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
            V +LQ G + H ++ +  D KD  +  ++L+DMY++ G    A  +F+ + ++  + + 
Sbjct: 524 RVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYT 583

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS- 527
           SMI G+   G    A+ LF +M    ++ D +T +  + ACS+ G + +G+ +  K+ S 
Sbjct: 584 SMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSL 643

Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAMIDCYGMH 578
           YG+   +     +TD++ + G L  A+ +  +M  +   + W+ +I    +H
Sbjct: 644 YGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 695



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 242/518 (46%), Gaps = 43/518 (8%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L  SCT+++ L    +LH H++  G    P    +L+  Y+    L  + ++ +      
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 239

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            F W +LI  Y+ N F ++++  Y +M+++     NF YPSVL+AC    DLG G++VH 
Sbjct: 240 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHE 299

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
            I         ++  +++  YG+ G +  AR +FDK+  RD VSW+S+I+ Y      +E
Sbjct: 300 SINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNE 359

Query: 180 GLKMFHSMVREGVEPDFVTMLSLA-----------------------------------E 204
             ++F SM  E +E + +   ++A                                    
Sbjct: 360 AFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLG 419

Query: 205 ACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
           AC  +   +  + IH   +R        + NS I MYS+C DL  A   F  +E +   S
Sbjct: 420 ACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLIS 479

Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
           W ++IS        ++A     +ML    EPN +T+ +VL  CA +  L+ GK  HC + 
Sbjct: 480 WNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMT 539

Query: 325 RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
           R+    ++  L  AL++ YA  GK+ E  +V   +GER+ +++  +I+ Y  +G  + AL
Sbjct: 540 RREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAAL 599

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLIDM 442
           +L  +M  + + PD  ++ + LSAC + G +  G  +   +  +      ++  + + D+
Sbjct: 600 KLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDL 659

Query: 443 YSKCGFKNLAYLLFERIQQKSV-VMWNSMI--CGFYQN 477
           + + G  N A  +   +  K    MW ++I  C  ++N
Sbjct: 660 FGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRN 697


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 159/427 (37%), Positives = 253/427 (59%), Gaps = 3/427 (0%)

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
           K VH Q+   G+  +   +   L+   A+   +     + + + ER+ +SW+++I  + +
Sbjct: 20  KQVHAQVTTTGIIHDL-IVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVK 78

Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFV 435
            G  +   +   ++   G  PD+FS+   + AC +   L +G  IH  V+K     D FV
Sbjct: 79  NGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFV 138

Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
            S+L+DMY+KCG  + A  LF+R+ +K +V    MI G+ + G   E+  LF QM  +  
Sbjct: 139 CSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGF 198

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D+V  +T + AC+ +G + K + VH  + +     D+ + TA+ DMYAKCG + +++ 
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +FD M ++NV+SWSAMI  YG HGQ  +A  LF  ML+SGI PN +TF+++L+ACSH+G 
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318

Query: 616 VEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V++G   F+ M + +GV PD++HY CMVDLL R+G ++ A ++I +M    +  IW A L
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFL 378

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CRIH+++D+ +   K L    T + G+Y LLSNIYA  G W +  K+R++M    LKK
Sbjct: 379 GACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKK 438

Query: 735 VPGYSTI 741
           +PGY+ I
Sbjct: 439 IPGYTWI 445



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 224/411 (54%), Gaps = 9/411 (2%)

Query: 3   LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
           LF+ C N+ ++ ++HA +  TG+ +D   + +L+   A+   L ++ L+F+  +E D   
Sbjct: 10  LFK-CRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVS 68

Query: 63  WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
           W+V+I  ++ N  +E     + ++IR  +   NF  P V++AC     L  G  +H  ++
Sbjct: 69  WSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVL 128

Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
           K G   D+ + ++++  Y + G +D+A+++FD+M  +D+V+ + +IA Y +    +E   
Sbjct: 129 KNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWV 188

Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           +F  M R+G  PD V M+++  AC +L ++  AR +H +V  R+  +D  LG + I MY+
Sbjct: 189 LFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYA 248

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
           KCG + S+   F ++E++   SW+AMI  Y   G  ++ALE F  ML     PN IT I+
Sbjct: 249 KCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFIS 308

Query: 303 VLGSCAGLGWLREGKSVHCQI-IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG- 360
           +L +C+  G + +G  +   + +  G+ P+  +    +++     G++ +  ++I  +  
Sbjct: 309 LLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHY-TCMVDLLGRAGRLDQALRLIENMEV 367

Query: 361 ERNILSWNMLISE---YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
           E++   W   +     + +  ++++A +LL+ +QT    P  + + S++ A
Sbjct: 368 EKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQN--PGHYILLSNIYA 416


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 163/444 (36%), Positives = 256/444 (57%), Gaps = 5/444 (1%)

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +VL  C     +REG+ VH  +I+    P   YL   LI  Y +C  + +  +V+  + E
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPV-YLRTRLIVLYNKCRCLGDARRVLDEMPE 73

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           RN++SW  +IS Y+++G + EAL L V+M   G  P+ F+ A+ L++C +    QLG QI
Sbjct: 74  RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 133

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H  VIK   +   FV SSL+DMY+K G    A  +F+ + ++ VV   ++I G+ Q G  
Sbjct: 134 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 193

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            EA++LF ++    +  + VT+ + + A S +  L+ G+ VH  ++   +   + +  +L
Sbjct: 194 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 253

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPN 599
            DMY+KCG L  ++R+FDSM ER V+SW+AM+  Y  HG   +A  LFK M +   +KP+
Sbjct: 254 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313

Query: 600 EVTFMNILWACSHSGSVEEGK--FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            VTF+ +L  CSH G  + G   FY    +  G EP+++HY C+VDL  R+G +E AF+ 
Sbjct: 314 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 373

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MPF    +IWG+LL  CR+H+ + + + + + L    + + G Y +LSN+YA  G W
Sbjct: 374 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 433

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           D+   VR +M+   + K PG S I
Sbjct: 434 DDVRTVRELMKEKAVIKEPGRSWI 457



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 240/463 (51%), Gaps = 38/463 (8%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +G+E +F    S+   C    ++R  + +H H+++   +    L    IV+Y+KC  L  
Sbjct: 4   QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A R   ++ +R   SWTAMIS Y++ G+  +AL  FV+ML     PN  T  TVL SC  
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
               + G+ +H  +I+      + ++G +L++ YA+ GK+ E  +V   + ER+++S   
Sbjct: 124 SSGFQLGRQIHSLVIKTSF-ESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 182

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +IS YA+ G+ +EAL+L  ++Q  G+  +  + AS L+A   + +L  G Q+H HV++  
Sbjct: 183 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAK 242

Query: 430 CKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
                V Q+SLIDMYSKCG    +  +F+ + +++V+ WN+M+ G+ ++G   EA+ LF 
Sbjct: 243 LPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFK 302

Query: 489 QMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            M   N ++ D VTFL  +  CS+ G  ++G  + +++++   +KD +            
Sbjct: 303 LMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN---QKDGF------------ 347

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
                         E  +  +  ++D +G  G++ +A    K+M     +P    + ++L
Sbjct: 348 --------------EPEIEHYGCVVDLFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLL 390

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSG 649
            AC    +V  G+F   A R+  +E +   +Y  + +L + +G
Sbjct: 391 GACRVHQNVHIGEFV--ARRLLEIESENAGNYVILSNLYASAG 431



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 206/389 (52%), Gaps = 12/389 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y SVL  C S   +  G++VH  +IK  ++    ++T ++  Y +  CL DAR+V D+M 
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+VVSW+++I+ Y      SE L +F  M+  G  P+  T  ++  +C      +  R 
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  V++   +    +G+S + MY+K G +  A R F  + +R   S TA+IS Y + G 
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            ++AL+ F ++       N +T  +VL + +GL  L  G+ VH  ++R  + P Y  L  
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL-PFYVVLQN 251

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-LM 396
           +LI+ Y++CG ++   ++  ++ ER ++SWN ++  Y++ G+ +EA+EL   M+    + 
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS-----SLIDMYSKCGFKNL 451
           PDS +  + LS C + G    GL+I   +  ++ KD F         ++D++ + G    
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEM--VNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369

Query: 452 AYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
           A+   +++  + +  +W S++  C  +QN
Sbjct: 370 AFEFIKKMPFEPTAAIWGSLLGACRVHQN 398



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 186/356 (52%), Gaps = 8/356 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           S T +R+  R+HAH++ T   Y+PP    TRLI  Y +   L  +R V D   E +   W
Sbjct: 22  SQTAIREGQRVHAHMIKTC--YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 79

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y    +  E++ L+ +M+      + F + +VL +C+S      G ++H  +IK
Sbjct: 80  TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 139

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F+    + +S+L  Y + G + +AR+VFD +  RDVVS ++II+ Y       E L +
Sbjct: 140 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 199

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  + REG+  ++VT  S+  A   L +L   R +H HVLR K+     L NS I MYSK
Sbjct: 200 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 259

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEPNLITLIT 302
           CG L  + R F  + +R   SW AM+  Y++ G  ++A+E F  M E  K +P+ +T + 
Sbjct: 260 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 319

Query: 303 VLGSCAGLGWLREGKSVHCQII--RKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           VL  C+  G    G  +  +++  + G  PE ++ G  +++ +   G++ E  + I
Sbjct: 320 VLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG-CVVDLFGRAGRVEEAFEFI 374



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 91/173 (52%)

Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
           M +  LE++   + + +  C +   + +G+ VH  +I       +Y+ T L  +Y KC  
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
           L  A+RV D M ERNVVSW+AMI  Y   G  ++A  LF +ML SG  PNE TF  +L +
Sbjct: 61  LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120

Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           C+ S   + G+   + +     E  +   + ++D+ +++G I  A ++   +P
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173


>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 764

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 197/651 (30%), Positives = 326/651 (50%), Gaps = 16/651 (2%)

Query: 103 RACSSLGDLGSGEKVHGRIIKCGF---DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           R C S+  L    ++H  I+  G     +      +++  Y   G L+ ARK+FDKM  R
Sbjct: 15  RKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFDKMPER 74

Query: 160 DVVSWSSIIASYFDNAD-VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           +VVS++++ ++Y  N D  S    + + M  E ++P+  T  SL + C  L  +     +
Sbjct: 75  NVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGSLL 134

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  +++     +  +  S + MYS CGDL SA R F  +      +W  MI    R+   
Sbjct: 135 HSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKI 194

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE--GKSVHCQIIRKGMGPEYDYLG 336
           +  L  F  ML    +P   T   VL +C+ LG  R   GK +H ++I   +  +   + 
Sbjct: 195 EDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLP-VE 253

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL---LVQMQTW 393
            AL++ Y  CG M E   V   I   N++SWN +IS  +  G  ++A+ +   L+++ T 
Sbjct: 254 NALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRIST- 312

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLA 452
              PD ++ ++++ A         G  +HG V K+   +  FV ++L+ MY K G    A
Sbjct: 313 -PRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESA 371

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F  I ++ VV+W  MI G  + GNS  A+ LF +MY      D  +  + + ACS++
Sbjct: 372 QKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDM 431

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L +G+  H   I  G    + +  AL DMY K G  +TA+ +F  +S  ++  W++M+
Sbjct: 432 AMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSML 491

Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
             Y  HG +  A S F+Q+L++G  P+ VT++++L ACSH GS +EGKF +N M+  G+ 
Sbjct: 492 GAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGIT 551

Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN--GSIWGALLNGCRIHKRIDVMKTIE 690
              +HY+CMV L+S++G +  A ++I   P P N    +W  LL+ C   + + +     
Sbjct: 552 AGFKHYSCMVSLVSKAGLLGEALELIKQSP-PENNQAELWRTLLSACVNARNLQIGLYAA 610

Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
            ++      D   + LLSN+YA  G W +  ++R  +      K PG S I
Sbjct: 611 DQILKLDPEDTATHILLSNLYAVNGRWKDVAEMRRKIRGLASAKDPGLSWI 661



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 282/573 (49%), Gaps = 12/573 (2%)

Query: 3   LFRSC---TNLRKLTRLHAHLLVTGL---HYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
           L R C   T L++  +LHA +L  G       P  +  LI  Y   GSL  +R +FD   
Sbjct: 13  LTRKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFDKMP 72

Query: 57  EPDSFMWAVLIKCYMWN-NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGE 115
           E +   +  L   Y  N ++   +  L ++M  E    ++  + S+++ C+ L D+  G 
Sbjct: 73  ERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGS 132

Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
            +H +IIK G+  + V+QTS+L  Y   G L+ AR++F+ +   D V+W+++I   F N 
Sbjct: 133 LLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRND 192

Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA--RSIHGHVLRRKIKIDGPL 233
            + +GL +F SM+  GV+P   T   +  AC +L S R +  + IH  ++   I  D P+
Sbjct: 193 KIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPV 252

Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK- 292
            N+ + MY  CGD+  A   F KI      SW ++IS  + +G+ ++A+  + ++L +  
Sbjct: 253 ENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRIST 312

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
             P+  T    + + A       GK +H Q+ + G      ++G  L+  Y + G+    
Sbjct: 313 PRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSV-FVGTTLLSMYFKNGEAESA 371

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
           +KV   I ER+++ W  +I   +R G S+ A++L ++M       D FS++S L AC ++
Sbjct: 372 QKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDM 431

Query: 413 GSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
             L+ G   H   IK    +   V  +L+DMY K G    A  +F  +    +  WNSM+
Sbjct: 432 AMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSML 491

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
             + Q+G   +A + F Q+  N    D VT+L+ + ACS+ G  ++GK++ +++   G+ 
Sbjct: 492 GAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGIT 551

Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
                 + +  + +K G L  A  +       N
Sbjct: 552 AGFKHYSCMVSLVSKAGLLGEALELIKQSPPEN 584


>gi|449522919|ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 670

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 192/617 (31%), Positives = 324/617 (52%), Gaps = 39/617 (6%)

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           D  +   ++  Y   GCL++ARKVFD++     V  ++++  Y  N   ++ +++   M 
Sbjct: 88  DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 147

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
           R  +E D  T     +AC  L        + G  + + +     LG+S +          
Sbjct: 148 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSIL---------- 197

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
                F++                   G F++    F+ ML  K EP+ +T+I+++ SC 
Sbjct: 198 ----NFLE-------------------GLFREGYNLFLDMLYNKIEPSAVTMISLIQSCG 234

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
            +  L  GK +H  ++  GM  +   L   LI+ Y + G +     +   +  RN++SWN
Sbjct: 235 EMRNLTFGKCMHGFVLGFGMSRDTRVL-TTLIDMYCKSGDVESARWIFENMPSRNLVSWN 293

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
           ++IS Y + G+  E L L  ++    +  DS +V S +  C     L  G  +HG + + 
Sbjct: 294 VMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRR 353

Query: 429 DCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
                 V  ++++D+Y+KCG    A  +FER++ K+V+ W +M+ G  QNG++ +A+ LF
Sbjct: 354 GLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLF 413

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            QM    +  + +T ++ +  C+ +G L +G+ VH  L  +    ++ + TAL DMYAKC
Sbjct: 414 DQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKC 473

Query: 548 GDLQTAQRVFD-SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
             + +A+ VF   ++ ++V+ +++MI  YGMHG  + A  ++ +M   G++PNE TF+++
Sbjct: 474 SKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSL 533

Query: 607 LWACSHSGSVEEGKFYF-NAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
           L ACSHSG VEEG   F N ++     P  + YAC+VDLLSR+G +  A ++I+ MPF  
Sbjct: 534 LSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTP 593

Query: 666 NGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVR 724
              I   LLNGC +HK I++ +K  ++ LS+   N + Y T LSNIYA+   WD    VR
Sbjct: 594 TSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYIT-LSNIYAKASRWDSVKYVR 652

Query: 725 SIMEVTGLKKVPGYSTI 741
            +M    +KK+PGYS+I
Sbjct: 653 GLMMEQEIKKIPGYSSI 669



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 268/555 (48%), Gaps = 38/555 (6%)

Query: 10  LRKLTRLHAHLLVTGLHY-DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           L +L+  +  +++T   Y D     +L+ +Y+ +G L ++R VFD   +P + +   ++ 
Sbjct: 69  LDELSPSNREIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVN 128

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y+ N  + + I L   M R      ++     L+AC  L D   G +V G  +  G   
Sbjct: 129 GYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAG 188

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
              + +SIL                                  F      EG  +F  M+
Sbjct: 189 GRFLGSSIL---------------------------------NFLEGLFREGYNLFLDML 215

Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
              +EP  VTM+SL ++CGE+ +L   + +HG VL   +  D  +  + I MY K GD+ 
Sbjct: 216 YNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVE 275

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
           SA   F  +  R   SW  MIS Y ++G   + L  F K++      +  T+++++  C+
Sbjct: 276 SARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCS 335

Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
               L  GK +H  I R+G+      L  A+++ YA+CG ++    V   +  +N++SW 
Sbjct: 336 RTADLDGGKILHGFIYRRGLDLNL-VLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWT 394

Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
            ++   A+ G +++AL+L  QMQ   +  ++ ++ S +  C  +G L+ G  +H  + + 
Sbjct: 395 AMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRF 454

Query: 429 DCKDE-FVQSSLIDMYSKCGFKNLAYLLFER-IQQKSVVMWNSMICGFYQNGNSLEAINL 486
               E  V ++LIDMY+KC   N A ++F+  +  K V+++NSMI G+  +G   +A+ +
Sbjct: 455 HFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCV 514

Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYA 545
           +H+M    L+ +E TF++ + ACS+ G +E+G  +   ++  +       +   + D+ +
Sbjct: 515 YHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLS 574

Query: 546 KCGDLQTAQRVFDSM 560
           + G L+ A+ + + M
Sbjct: 575 RAGRLRQAEELINQM 589



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 184/363 (50%), Gaps = 4/363 (1%)

Query: 1   MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
           + L +SC  +R LT    +H  +L  G+  D    T LI+ Y + G + S+R +F+    
Sbjct: 227 ISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPS 286

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
            +   W V+I  Y+ N    E++ L+ K+I +     +    S+++ CS   DL  G+ +
Sbjct: 287 RNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKIL 346

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG I + G D + V+ T+I+  Y + G L  A  VF++M +++V+SW++++     N   
Sbjct: 347 HGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 406

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            + LK+F  M  E V  + +T++SL   C  L  LR  RS+H  + R     +  +  + 
Sbjct: 407 RDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTAL 466

Query: 238 IVMYSKCGDLLSAERTF-VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
           I MY+KC  + SAE  F   +  +    + +MIS Y   G   KAL  + +M     +PN
Sbjct: 467 IDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPN 526

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T +++L +C+  G + EG ++   +++       D L   +++  +  G++ + E++I
Sbjct: 527 ESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELI 586

Query: 357 HAI 359
           + +
Sbjct: 587 NQM 589


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 210/704 (29%), Positives = 354/704 (50%), Gaps = 21/704 (2%)

Query: 44  SLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR--EQATISNFIYPSV 101
           S +    +FD    P++  +  ++  Y+  +   +S+  +    R         F     
Sbjct: 22  SFQHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLA 81

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           L+AC     LG   ++HG +I  GF     +  S++  Y + G L+ A  VF  +   D+
Sbjct: 82  LKACCGFPKLG--RQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDI 139

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGH 221
           VSW++I++ +  + +    L     M   GV+ D VT  +    C +         +H  
Sbjct: 140 VSWNTILSGFEKSEN---ALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTL 196

Query: 222 VLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ-K 280
            L+   K D  +GN+ + MYS+   L+ A + F ++  R   SW+AMI+ Y + G    +
Sbjct: 197 ALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQ 256

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
           A+  FV+M+    + + + +   L  C     L  GK +HC  ++ G    +  +G  LI
Sbjct: 257 AILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGH-ETHTSVGNVLI 315

Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
             Y++C  + + + V   I +RN++SW  +IS Y      + A+ L  +M+  G+ P+  
Sbjct: 316 STYSKCEIIEDAKAVFELINDRNVISWTTMISLY-----EEGAVSLFNKMRLDGVYPNDV 370

Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERI 459
           +    L A      ++ GL +HG  IK D   E  V +SLI MY+K  F   A  +F  +
Sbjct: 371 TFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIEL 430

Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF---LTAIQACSNIGQLE 516
             + ++ WN++I G+ QN    EA+  F    +   + +E TF   L AI A  +I  L+
Sbjct: 431 PYREIISWNALISGYAQNALCQEALEAFLYAIME-YKPNEYTFGSVLNAISAGEDI-SLK 488

Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
            G+  H  LI  G+  D  I  AL DMYAK G +Q +QRVF+  S+++  +W+A+I  Y 
Sbjct: 489 HGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYA 548

Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDL 635
            HG       LF++M    IKP+ V F+++L ACS +  V+ G+ +FN M +   +EP+ 
Sbjct: 549 QHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEG 608

Query: 636 QHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSV 695
           +HY+CMVD+L R+G +E A +++  +P     S   +LL  CR H  +++ + I  +L  
Sbjct: 609 EHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMK 668

Query: 696 TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
               ++G Y L+SN+YA++G+W++  KVR  M   G+ K  G+S
Sbjct: 669 KEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFS 712



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 259/560 (46%), Gaps = 53/560 (9%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW-- 72
           +LH   L  G   D      L+  Y+    L  +R VFD     D   W+ +I  Y    
Sbjct: 192 QLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEG 251

Query: 73  NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
           +N   ++IL++ +M+RE     N      L  C    +L  G+++H   +K G +    +
Sbjct: 252 DNGL-QAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSV 310

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
              ++ TY +   ++DA+ VF+ +  R+V+SW+++I+ Y + A     + +F+ M  +GV
Sbjct: 311 GNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGA-----VSLFNKMRLDGV 365

Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
            P+ VT + L  A      +     +HG  ++     +  +GNS I MY+K   +  A R
Sbjct: 366 YPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASR 425

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS-CAGLG 311
            F+++  R   SW A+IS Y ++   Q+ALE+F+  + ++ +PN  T  +VL +  AG  
Sbjct: 426 VFIELPYREIISWNALISGYAQNALCQEALEAFLYAI-MEYKPNEYTFGSVLNAISAGED 484

Query: 312 W-LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
             L+ G+  H  +I+ G+  +   +  AL++ YA+ G + E ++V +   +++  +W  L
Sbjct: 485 ISLKHGQRCHSHLIKVGLNVD-PIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTAL 543

Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--- 427
           IS YA+ G  +  ++L  +M+   + PD+    S L+AC     + +G Q    +IK   
Sbjct: 544 ISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHM 603

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
           I+ + E   S ++DM  + G    A  +  RI                  G  + A+   
Sbjct: 604 IEPEGEHY-SCMVDMLGRAGRLEEAEEILARI----------------PGGPGVSALQ-- 644

Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY-GVRKDIYIDTALTDMYAK 546
                           + + AC   G +E  + + + L+    +    Y+   ++++YA+
Sbjct: 645 ----------------SLLGACRTHGNVEMAERIANDLMKKEPLESGPYV--LMSNLYAQ 686

Query: 547 CGDLQTAQRVFDSMSERNVV 566
            GD +   +V   M ER V+
Sbjct: 687 KGDWEKVAKVRKEMRERGVM 706



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 176/354 (49%), Gaps = 10/354 (2%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           NL    ++H   + TG          LI +Y++   +  ++ VF+   + +   W  +I 
Sbjct: 288 NLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS 347

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y      E ++ L++KM  +    ++  +  +L A +    +  G  VHG  IK  F  
Sbjct: 348 LYE-----EGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVS 402

Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
           +  +  S++  Y +F  + DA +VF ++  R+++SW+++I+ Y  NA   E L+ F   +
Sbjct: 403 ELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAI 462

Query: 189 REGVEPDFVTMLSLAEA--CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
            E  +P+  T  S+  A   GE  SL+  +  H H+++  + +D  +  + + MY+K G 
Sbjct: 463 ME-YKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGS 521

Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           +  ++R F +  K+   +WTA+IS Y + G ++  ++ F +M + + +P+ +  ++VL +
Sbjct: 522 IQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTA 581

Query: 307 CAGLGWLREGKSVHCQIIRKGM-GPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           C+    +  G+     +I+  M  PE ++    +++     G++ E E+++  I
Sbjct: 582 CSRNRMVDMGRQFFNMMIKDHMIEPEGEHYS-CMVDMLGRAGRLEEAEEILARI 634



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 11/161 (6%)

Query: 9   NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
           +L+   R H+HL+  GL+ DP  S  L++ YA+ GS++ S+ VF+   +   F W  LI 
Sbjct: 486 SLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALIS 545

Query: 69  CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
            Y  +  +E  I L+ +M +E+      I+ SVL ACS    +  G +    +I     K
Sbjct: 546 GYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMI-----K 600

Query: 129 DDVIQ------TSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
           D +I+      + ++   G  G L++A ++  ++     VS
Sbjct: 601 DHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVS 641


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 184/619 (29%), Positives = 314/619 (50%), Gaps = 43/619 (6%)

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D      ++  Y   G L +ARK+F++    + ++WSS+++ Y  N    EGL+ F  M
Sbjct: 66  RDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQM 125

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
             +G +P   T+ S+  AC  L  L   + IH + ++ +++ +  +    + MYSKC  L
Sbjct: 126 WSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCL 185

Query: 248 LSAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
           L AE  F  + +++    WTAM++ Y ++G   KA++ F +M     E N  T  ++L +
Sbjct: 186 LEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTA 245

Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
           C  +     G+ VH  II  G GP   Y+  AL++ YA+CG ++    ++  +   +++ 
Sbjct: 246 CTSISAYAFGRQVHGCIIWSGFGPNV-YVQSALVDMYAKCGDLASARMILDTMEIDDVVC 304

Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
           WN +I      G  +EAL L  +M    +  D F+  S L +  +  +L++G  +H   I
Sbjct: 305 WNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTI 364

Query: 427 KID---CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           K     CK   V ++L+DMY+K G  + A  +F +I  K V+ W S++ G+  NG   +A
Sbjct: 365 KTGFDACKT--VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKA 422

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           + LF  M    +++D+        AC+ +  +E G+ VH   I       +  + +L  M
Sbjct: 423 LQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITM 482

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG L+ A RV DSM  RNV+SW+A+I  Y                            
Sbjct: 483 YAKCGCLEDAIRVXDSMETRNVISWTAIIVGY---------------------------- 514

Query: 604 MNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
                  + +G VE G+ YF +M +++G++P    YACM+DLL R+G I  A  +++ M 
Sbjct: 515 -------AQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMD 567

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              + +IW +LL+ CR+H  +++ +   K L     +++  Y LLSN+++  G W++   
Sbjct: 568 VEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAH 627

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +R  M+  G+ + PGYS I
Sbjct: 628 IRRAMKTMGIXQEPGYSWI 646



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 269/568 (47%), Gaps = 10/568 (1%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           +I +YA +G+L  +R +F+     +S  W+ L+  Y  N    E +  + +M  +    S
Sbjct: 74  MISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133

Query: 95  NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFD 154
            +   SVLRACS+L  L +G+ +H   IK   + +  + T ++  Y +  CL +A  +F 
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193

Query: 155 KMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLR 213
            +  R + V W++++  Y  N +  + ++ F  M  +G+E +  T  S+  AC  + +  
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253

Query: 214 PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYN 273
             R +HG ++      +  + ++ + MY+KCGDL SA      +E      W +MI    
Sbjct: 254 FGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV 313

Query: 274 RSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
             G+ ++AL  F KM       +  T  +VL S A    L+ G+SVH   I+ G      
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA-CK 372

Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
            +  AL++ YA+ G +S    V + I +++++SW  L++ Y   G  ++AL+L   M+T 
Sbjct: 373 TVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTA 432

Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
            +  D F VA   SAC  +  ++ G Q+H + IK         ++SLI MY+KCG    A
Sbjct: 433 RVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDA 492

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM-YLNCLEMDEVTFLTAIQACSN 511
             + + ++ ++V+ W ++I G+ QNG      + F  M  +  ++     +   I     
Sbjct: 493 IRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGR 552

Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV---FDSMSERNVVSW 568
            G++ + +   H L    V  D  I  +L       G+L+  +R       +   N + +
Sbjct: 553 AGKINEAE---HLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPY 609

Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             + + + + G+  DAA + + M   GI
Sbjct: 610 VLLSNMFSVAGRWEDAAHIRRAMKTMGI 637



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 223/482 (46%), Gaps = 38/482 (7%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           + R+C+ L  L     +H + +   L  +   +T L++ Y++   L  +  +F +  +  
Sbjct: 140 VLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRK 199

Query: 60  SFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
           +++ W  ++  Y  N    ++I  + +M  +    ++F +PS+L AC+S+     G +VH
Sbjct: 200 NYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVH 259

Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
           G II  GF  +  +Q++++  Y + G L  AR + D M   DVV W+S+I     +  + 
Sbjct: 260 GCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYME 319

Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           E L +FH M    +  D  T  S+ ++     +L+   S+H   ++        + N+ +
Sbjct: 320 EALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALV 379

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
            MY+K G+L  A   F KI  +   SWT++++ Y  +G+ +KAL+ F  M   + + +  
Sbjct: 380 DMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQF 439

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
            +  V  +CA L  +  G+ VH   I+   G        +LI  YA+CG + +  +V  +
Sbjct: 440 VVACVFSACAELTVIEFGRQVHANFIKSSAGSLLS-AENSLITMYAKCGCLEDAIRVXDS 498

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVA-------------- 403
           +  RN++SW  +I  YA+ G+ +        M+  +G+ P S   A              
Sbjct: 499 METRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINE 558

Query: 404 ------------------SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSK 445
                             S LSAC   G+L+LG +   ++IK++  +      L +M+S 
Sbjct: 559 AEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSV 618

Query: 446 CG 447
            G
Sbjct: 619 AG 620



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 21/242 (8%)

Query: 474 FYQNGNSLEAINLF--HQMYLNCLE--------MDEVTFLTAIQACSNIGQLEKGKWVHH 523
           ++Q  N     N    H +++ C+         +D    L+ +   S  G++++ +    
Sbjct: 5   YFQTSNFFTKCNFHFKHPLFIRCIHGIAHYSSNLDSNQLLSEL---SKNGRVDEAR---- 57

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
           KL      +D Y    +   YA  G+L  A+++F+     N ++WS+++  Y  +G   +
Sbjct: 58  KLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVE 117

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
               F QM   G KP++ T  ++L ACS    +  GK          +E ++     +VD
Sbjct: 118 GLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVD 177

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE--KELSVTGTNDN 701
           + S+   +  A  +  S+P   N   W A+L G    +  + +K I+  KE+   G   N
Sbjct: 178 MYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTG--YAQNGESLKAIQCFKEMRNQGMESN 235

Query: 702 GY 703
            +
Sbjct: 236 HF 237


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 171/547 (31%), Positives = 296/547 (54%), Gaps = 7/547 (1%)

Query: 198 TMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI 257
           T+ SL   C +  +LR   S+H  VL+   + D  + N  + MY+KCG    A + F ++
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
            ++   SW+AMIS Y+++G  Q A++ + +M  V   PN     +V+ +CA L  +  G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
            +H + ++ G      ++  +LI  Y +C + S+   V     E N +S+N LI+ +   
Sbjct: 122 KIHSRSLKFGY-ESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180

Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQ 436
              +  LE    M+  GL+PD F+    L  C    +L+ G ++H   +K++     F+ 
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-L 495
           + +I MYS+      A   F  I++K V+ WN++I       +  + + +F  M     +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             D+ TF +A+ AC+ +  +  GK +H  L+   + +D+ +  AL +MYAKCG +  A  
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           +F  M   N+VSW+ +I  +G HG    A  LF+QM  SGI+P+ VTF+ +L AC+H+G 
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V++G+ YFN+M   +G+ PD++H++C++D+L R+G +  A + +   PF  +  +  +LL
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
           +  R+H  + + + + K L          Y LLSN+YA +G WD   + R  ++ +GLKK
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540

Query: 735 VPGYSTI 741
            PG+S I
Sbjct: 541 EPGHSLI 547



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 229/459 (49%), Gaps = 7/459 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L  CS    L  G  +H  ++K G   D  +   +L  Y + G    AR+VFD+M  +
Sbjct: 8   SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEK 67

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           ++VSWS++I+ Y    +    + ++  M    + P+     S+  AC  L ++   + IH
Sbjct: 68  NLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIH 124

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              L+   +    + NS I MY KC     A   F    +    S+ A+I+ +  +   +
Sbjct: 125 SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLE 184

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           + LE F  M +    P+    + VLG C     L+ G  +HCQ ++  +     ++G  +
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST-PFIGNVI 243

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPD 398
           I  Y+E   + E EK    I E++++SWN LI+  +      + L +   M +   + PD
Sbjct: 244 ITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPD 303

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+  S+L+AC  + S+  G QIH H+++    +D  V ++L++MY+KCG    AY +F 
Sbjct: 304 DFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFS 363

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           ++   ++V WN++I GF  +G    A+ LF QM  + +  D VTF+  + AC++ G ++K
Sbjct: 364 KMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDK 423

Query: 518 GKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           G+   + +  +YG+  DI   + L DM  + G L  A+ 
Sbjct: 424 GQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEE 462



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 201/420 (47%), Gaps = 8/420 (1%)

Query: 3   LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   C+  + L     LHA +L TG   D   S  ++  YA+ G    +R VFD   E +
Sbjct: 9   LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y      + +I LY +M       + +++ SV+ AC+SL  +  G+K+H 
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHS 125

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           R +K G++    +  S++  Y +     DA  VF      + VS++++I  + +N  +  
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           GL+ F  M ++G+ PD    + +   C    +L+    +H   ++  +     +GN  I 
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIIT 245

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLI 298
           MYS+   +  AE+ F  IE++   SW  +I+  +      K L  F  M  E    P+  
Sbjct: 246 MYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDF 305

Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
           T  + L +CAGL  +  GK +H  ++R  +  +   +G AL+  YA+CG +     +   
Sbjct: 306 TFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLG-VGNALVNMYAKCGCIGYAYDIFSK 364

Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
           +   N++SWN +I+ +   G+ + A+EL  QM   G+ PDS +    L+AC + G +  G
Sbjct: 365 MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG 424


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 196/587 (33%), Positives = 309/587 (52%), Gaps = 56/587 (9%)

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKI-KIDGPLGN--SFIVMYSKCGDLLSAERTFVK 256
           LSL   C  L SLR    IH  +++  +   +  L     F V+      L  A   F  
Sbjct: 6   LSLLHNCKTLQSLR---MIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           I++     W  M   +  S     AL  +V M+ +   PN  T   +L SCA     REG
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122

Query: 317 KSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECEKVIHAIGERNILS------- 366
           + +H  +++ G    YD   Y+  +LI  Y + G++ +  KV      R+++S       
Sbjct: 123 QQIHGHVLKLG----YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 178

Query: 367 ------------------------WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
                                   WN +IS YA  G +KEALEL  +M    + PD  ++
Sbjct: 179 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 238

Query: 403 ASSLSACGNVGSLQLGLQIHG----HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
            S +SAC    S++LG Q+H     H    + K   + ++LID+Y KCG    A  LFE 
Sbjct: 239 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLK---IVNALIDLYIKCGEVETACGLFEG 295

Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
           +  K V+ WN++I G+       EA+ LF +M  +    ++VT L+ + AC+++G +E G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 355

Query: 519 KWVH---HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
           +W+H   +K +  GV       T+L DMYAKCGD++ AQ+VFDS+  R++ SW+AMI  +
Sbjct: 356 RWIHVYINKRLK-GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGF 414

Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPD 634
            MHG+ N A  +F +M  + I+P+++TF+ +L ACSHSG ++ G+  F +M+  + + P 
Sbjct: 415 AMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPK 474

Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
           L+HY CM+DLL  SG  + A +MI++M    +G IW +LL  C+++  +++ ++  + L 
Sbjct: 475 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLI 534

Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                + G Y LLSNIYA  G W+E  K+R+++   G+KKVPG S+I
Sbjct: 535 KIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 581



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 254/519 (48%), Gaps = 44/519 (8%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIES---YAEMGSLRSSRLVFDTFKE 57
           + L  +C  L+ L  +HA ++ TGLH    A ++LIE          L  +  VF+T +E
Sbjct: 6   LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65

Query: 58  PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
           P+  +W  + + +  ++    ++ LY  MI      + + +P +L++C+       G+++
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR------------------ 159
           HG ++K G+D D  + TS++  Y + G L+DARKVFD+ + R                  
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185

Query: 160 -------------DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
                        DVVSW+++I+ Y +  +  E L++F  M++  V PD  TM+S+  AC
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245

Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
            +  S+   R +H  +       +  + N+ I +Y KCG++ +A   F  +  +   SW 
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305

Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR- 325
            +I  Y     +++AL  F +ML   E PN +T++++L +CA LG +  G+ +H  I + 
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 365

Query: 326 -KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
            KG+     +   +LI+ YA+CG +   ++V  +I  R++ SWN +I  +A  G +  A 
Sbjct: 366 LKGVANASSH-RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV---IKIDCKDEFVQSSLID 441
           ++  +M+   + PD  +    LSAC + G L LG  I   +    KI  K E     +ID
Sbjct: 425 DIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHY-GCMID 483

Query: 442 MYSKCG-FKNLAYLLFERIQQKSVVMWNSMI--CGFYQN 477
           +    G FK    ++     +   V+W S++  C  Y N
Sbjct: 484 LLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYAN 522



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 197/424 (46%), Gaps = 36/424 (8%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H D  + T LI  YA  G + S++ +FD     D   W  +I  Y      +E++ L+ +
Sbjct: 166 HRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKE 225

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M++           SV+ AC+    +  G +VH  I   GF  +  I  +++  Y + G 
Sbjct: 226 MMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           ++ A  +F+ ++ +DV+SW+++I  Y       E L +F  M+R G  P+ VTMLS+  A
Sbjct: 286 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 345

Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGN--SFIVMYSKCGDLLSAERTFVKIEKRCTT 263
           C  L ++   R IH ++ +R   +     +  S I MY+KCGD+ +A++ F  I  R  +
Sbjct: 346 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 405

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW AMI  +   G    A + F +M + + EP+ IT + +L +C+  G L  G+      
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH----- 460

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
           I + M  +Y  + P L E Y                          +I      G+ KEA
Sbjct: 461 IFRSMKEDYK-ITPKL-EHYG------------------------CMIDLLGHSGLFKEA 494

Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMY 443
            E++  M+   + PD     S L AC    +++LG     ++IKI+ K+      L ++Y
Sbjct: 495 EEMINTME---MEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIY 551

Query: 444 SKCG 447
           +  G
Sbjct: 552 ATAG 555


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 216/759 (28%), Positives = 361/759 (47%), Gaps = 56/759 (7%)

Query: 3   LFRSCTN-----LRKLTRLHAHLLVTGLHYDPPASTRLIESYAE--MGSLRSSRLVFDTF 55
           L R+C +     L   T++H  L  T    +      LI  Y    +G    ++ VFD  
Sbjct: 170 LLRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGT 229

Query: 56  KEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI----SNFIYPSVLRACS-SLGD 110
              D   W  L+  Y        +  L+  M RE + I    +   + S++ A S S G 
Sbjct: 230 PIRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGS 289

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIAS 170
               ++V   ++K G   D  + ++++  +   G +D+A+ +F  +  ++ V+ + +I  
Sbjct: 290 SAVLDQVFVSVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVG 349

Query: 171 YFDNADVSEGLKMF---HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI 227
                   E +K+F    + +    +   V + ++AE       LR  +  HGH+LR  +
Sbjct: 350 LVKQHCSEEAVKIFVGTRNTIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGL 409

Query: 228 K-IDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
             +   + N  + MY+KCG + SA + F  +E     SW  +IS  +++G          
Sbjct: 410 TDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALDQNG---------- 459

Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
                                  L  L  G+ VHC  ++ G+  +   +   L++ Y EC
Sbjct: 460 -----------------------LKLLSAGQQVHCDAVKWGLDLDTS-VSNVLVKMYGEC 495

Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYAR-KGMSKEALELLVQMQTWGLMPDSFSVASS 405
           G MS+C KV +++ + + +SWN ++   A  +    E +E+   M   GL+P+  +  + 
Sbjct: 496 GAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNL 555

Query: 406 LSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ-QKS 463
           L+A   +  L+LG Q H  V+K    D+  V ++LI  Y+K G  N    LF  +  ++ 
Sbjct: 556 LAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRD 615

Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
            V WNSMI G+  NG   EA++    M  +   MD  TF   + AC+++  LE+G  +H 
Sbjct: 616 AVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHA 675

Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
             I   +  D+ +++AL DMY+KCG +  A ++F+SM++RN  SW++MI  Y  HG    
Sbjct: 676 FGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRK 735

Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVD 643
           A   F++ML S   P+ VTF+++L ACSH+G VE G  YF  M   G+ P ++HY+C++D
Sbjct: 736 ALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVID 795

Query: 644 LLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK---RIDVMKTIEKELSVTGTND 700
           LL R+G I+   + I  MP   N  IW  +L  CR  K   +I++ +   + L      +
Sbjct: 796 LLGRAGKIDKIKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQN 855

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
              Y L SN +A  G W++  K R+ M    +KK  G S
Sbjct: 856 PVNYVLASNFHAATGMWEDTAKARAGMRQATVKKEAGRS 894



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 178/689 (25%), Positives = 315/689 (45%), Gaps = 64/689 (9%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
           LH  L+  GL++D   S  L+ SYA+   L ++  VFD   + ++  W  L+  Y+    
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141

Query: 76  FEESILLYHKMIREQAT---ISNFIYPSVLRACSSLGD--LGSGEKVHGRIIKCGFDKDD 130
            EE+  ++  M+RE       ++F + ++LRAC   G   LG   +VHG + K  +  + 
Sbjct: 142 TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNT 201

Query: 131 VIQTSILCTYGE--FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
            +  +++  YG    G    A++VFD    RD+++W+++++ Y    DV     +F  M 
Sbjct: 202 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQ 261

Query: 189 REG----VEPDFVTMLSLAEACGELCSLRPA--RSIHGHVLRRKIKIDGPLGNSFIVMYS 242
           RE     + P   T  SL  A   L S   A    +   VL+     D  +G++ +  ++
Sbjct: 262 REDSRIQLRPTEHTFGSLITAT-SLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFA 320

Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV---KMLEVKEEPNLIT 299
           + G +  A+  F+ ++++   +   +I    +    ++A++ FV     + V  +  ++ 
Sbjct: 321 RHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADTYVVL 380

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           L  +         LR+GK  H  ++R G+      +   L+  YA+CG +    K+   +
Sbjct: 381 LSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLM 440

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
              + +SWN +IS   + G+                                   L  G 
Sbjct: 441 EATDRISWNTIISALDQNGLKL---------------------------------LSAGQ 467

Query: 420 QIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
           Q+H   +K  +D  D  V + L+ MY +CG  +  + +F  +     V WNSM+     +
Sbjct: 468 QVHCDAVKWGLDL-DTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASS 526

Query: 478 GNSL-EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
              + E + +F+ M    L  ++VTF+  + A S +  LE GK  H  ++ +GV  D  +
Sbjct: 527 QAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVV 586

Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           D AL   YAK GD+ + + +F +MS  R+ VSW++MI  Y  +G L +A      ML SG
Sbjct: 587 DNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSG 646

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV----EPDLQHYACMVDLLSRSGDI 651
              +  TF  IL AC+   ++E G      M  FG+    E D+   + +VD+ S+ G +
Sbjct: 647 QIMDCCTFSIILNACASVAALERGM----EMHAFGIRSHLESDVVVESALVDMYSKCGRV 702

Query: 652 EGAFKMIHSMPFPANGSIWGALLNGCRIH 680
           + A K+ +SM    N   W ++++G   H
Sbjct: 703 DYASKLFNSMT-QRNEFSWNSMISGYARH 730



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/585 (25%), Positives = 271/585 (46%), Gaps = 58/585 (9%)

Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
           S E +H  +IK G + D  +   ++ +Y +   L  A +VFD+M  R+ VSW+ +++ Y 
Sbjct: 78  SPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYV 137

Query: 173 DNADVSEGLKMFHSMVRE---GVEPDFVTMLSLAEAC--GELCSLRPARSIHGHVLRRKI 227
                 E  ++F +M+RE   G  P   T  +L  AC  G    L  A  +HG + + + 
Sbjct: 138 LQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEY 197

Query: 228 KIDGPLGNSFIVMYSKC--GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
             +  + N+ I MY  C  G  + A+R F     R   +W A++S Y + G     + +F
Sbjct: 198 ASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKG---DVVSTF 254

Query: 286 VKMLEVKEEPNLITLIT---VLGSCAGLGWLREGKS-----VHCQIIRKGMGPEYDYLGP 337
              ++++ E + I L       GS      L  G S     V   +++ G   +  Y+G 
Sbjct: 255 TLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDL-YVGS 313

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLM 396
           AL+  +A  G + E + +  ++ E+N ++ N LI    ++  S+EA+++ V  + T  + 
Sbjct: 314 ALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVN 373

Query: 397 PDSFSVASSLSACGNVGS--LQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLA 452
            D++ V  S  A  ++    L+ G + HGH+++    D    V + L++MY+KCG  + A
Sbjct: 374 ADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSA 433

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
             +F+ ++    + WN++I    QNG  L                               
Sbjct: 434 SKIFQLMEATDRISWNTIISALDQNGLKL------------------------------- 462

Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
             L  G+ VH   + +G+  D  +   L  MY +CG +    +VF+SM++ + VSW++M+
Sbjct: 463 --LSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMM 520

Query: 573 DCYG-MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
                    +++   +F  M+  G+ PN+VTF+N+L A S    +E GK +  A+   GV
Sbjct: 521 GVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGV 580

Query: 632 EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
             D      ++   ++SGD+     +  +M    +   W ++++G
Sbjct: 581 MDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISG 625



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 170/402 (42%), Gaps = 56/402 (13%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK-EPDSFMWAVLIKCYMWN 73
           + HA +L  G+  D      LI  YA+ G + S   +F       D+  W  +I  Y++N
Sbjct: 570 QFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYN 629

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
            + +E++     M+     +    +  +L AC+S+  L  G ++H   I+   + D V++
Sbjct: 630 GYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVE 689

Query: 134 TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
           ++++  Y + G +D A K+F+ MT R+  SW+S+I+ Y  +    + L+ F  M+R    
Sbjct: 690 SALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRES 749

Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV----MYSKCGDLLS 249
           PD VT +S+  AC            H  ++ R ++    + +  I+     YS   DLL 
Sbjct: 750 PDHVTFVSVLSACS-----------HAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLG 798

Query: 250 AERTFVKIE--------KRCTTSW-TAMISCYNRSGWFQKAL--ESFVKMLEVK-EEPNL 297
                 KI+        K     W T +++C       +  L  E+   +LE++ + P  
Sbjct: 799 RAGKIDKIKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVN 858

Query: 298 ITLITVLGSCAGLGWLREGKS---VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
             L +   +  G+ W    K+   +    ++K  G  + YLG  +  F+    K + C  
Sbjct: 859 YVLASNFHAATGM-WEDTAKARAGMRQATVKKEAGRSWTYLGIQIFRFHF---KFTMCS- 913

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
                               A +  SK+ L +L+    WGL+
Sbjct: 914 --------------------AERSHSKQILRILIAQWNWGLV 935



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 12/291 (4%)

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           D F+ + L++ Y+K      A  +F+ + Q++ V W  ++ G+   G + EA  +F  M 
Sbjct: 94  DLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGITEEAFRVFRAML 153

Query: 492 LNC---LEMDEVTFLTAIQACSNIG--QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
                       TF T ++AC + G  +L     VH  L       +  +  AL  MY  
Sbjct: 154 REVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCNALISMYGS 213

Query: 547 C--GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML--DSGI--KPNE 600
           C  G    AQRVFD    R++++W+A++  Y   G +    +LF  M   DS I  +P E
Sbjct: 214 CTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDSRIQLRPTE 273

Query: 601 VTFMNILWACS-HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
            TF +++ A S  SGS       F ++   G   DL   + +V   +R G I+ A  +  
Sbjct: 274 HTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFL 333

Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNI 710
           S+      ++ G ++   + H   + +K      +    N + Y  LLS I
Sbjct: 334 SLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADTYVVLLSAI 384


>gi|413944451|gb|AFW77100.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 678

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 192/641 (29%), Positives = 320/641 (49%), Gaps = 14/641 (2%)

Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
           G+   VHG  IK G      +  ++L  Y       DAR++FD+M  R++VSWS +I+  
Sbjct: 23  GNPHSVHGVAIKLGCIVSTFLCNNLLYAYLRRQVPADARRLFDEMPRRNLVSWSVVISGS 82

Query: 172 FDNADVSEGLKMFHSMVREG-----VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
             +  ++E   +F  M+          PD  T+ +L   C     +     +H  V +  
Sbjct: 83  AHHGVLAEAFALFSHMLHGAGHGSWDRPDSFTLGALVAGCSRARDVDAGMQVHACVAKFG 142

Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY---NRSGWFQKALE 283
           +  D  +  + + MY+KCG + S+ R F    +R   SWT+MI+C      SG++  +L 
Sbjct: 143 VDEDDSVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYYDTSLL 202

Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEF 342
            F KML +K  P   T   +L        L  G  +H  +++  MG E D  LG AL+  
Sbjct: 203 LFKKMLALKVWPTNATYSCILKVFDTPDLLSVGMQLHGCLLK--MGTEVDTALGTALMTM 260

Query: 343 YAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSV 402
           Y  CG + E  ++   I   + LS   L+  YAR G + EA+ +  +M    +  D  ++
Sbjct: 261 YGRCGGVDEIPRLACRI-RHDALSRTALLGAYARTGYNAEAIGVFKEMIMKNMAIDQSAM 319

Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
              L  C + G L++  Q+H + +K   K D  + ++ I +Y +CG  N A  +F  +++
Sbjct: 320 TGMLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEE 379

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
             ++ W +++  + QNG   E +  F +M    L        + ++A S+I  L  G  +
Sbjct: 380 NDIISWTALLTCYTQNGLDEEVLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQI 439

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H + +  G+  D  +  AL  +YA CG +Q A ++F+SMS R++V+W+A++  +  HG  
Sbjct: 440 HSRTLKLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGSE 499

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYAC 640
             A  LF  M + GI P+  TF+ +L +CS  G V+EG  YFN M+  + +EP + HY C
Sbjct: 500 VAAIQLFDLMQEEGICPDAYTFVGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTC 559

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
           MVDLL+R+G    A   I +MP+  +  +W ALL  C++H  + + +   K++     +D
Sbjct: 560 MVDLLARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHGNLGLGRIAAKKILEITPHD 619

Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              Y +LS+I+A    WDE    R++ +    +K  G S I
Sbjct: 620 YSAYIILSSIHASVDMWDEKYWNRTVFDTQRARKDTGRSWI 660



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 153/604 (25%), Positives = 286/604 (47%), Gaps = 25/604 (4%)

Query: 35  LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
           L+ +Y        +R +FD     +   W+V+I     +    E+  L+  M+      S
Sbjct: 47  LLYAYLRRQVPADARRLFDEMPRRNLVSWSVVISGSAHHGVLAEAFALFSHMLHGAGHGS 106

Query: 95  -----NFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDA 149
                +F   +++  CS   D+ +G +VH  + K G D+DD +  +++  Y + G +D +
Sbjct: 107 WDRPDSFTLGALVAGCSRARDVDAGMQVHACVAKFGVDEDDSVAAALVDMYAKCGWVDSS 166

Query: 150 RKVFDKMTSRDVVSWSSIIA--------SYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
            + F     R V+SW+S+IA         Y+D +     L +F  M+   V P   T   
Sbjct: 167 WRAFTLAPQRSVLSWTSMIACLVNQGSSGYYDTS-----LLLFKKMLALKVWPTNATYSC 221

Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
           + +       L     +HG +L+   ++D  LG + + MY +CG +    R   +I +  
Sbjct: 222 ILKVFDTPDLLSVGMQLHGCLLKMGTEVDTALGTALMTMYGRCGGVDEIPRLACRI-RHD 280

Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
             S TA++  Y R+G+  +A+  F +M+      +   +  +L  C+  G LR  + VHC
Sbjct: 281 ALSRTALLGAYARTGYNAEAIGVFKEMIMKNMAIDQSAMTGMLQVCSSFGQLRMVRQVHC 340

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
             ++     +   L  A I  Y  CG ++  E V + + E +I+SW  L++ Y + G+ +
Sbjct: 341 YALKTFFKLDTLLLN-ATITVYGRCGDINSAETVFYLMEENDIISWTALLTCYTQNGLDE 399

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLI 440
           E L    +M   GL    F + S L A  ++ +L +GLQIH   +K+   D+  VQ++L+
Sbjct: 400 EVLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHSRTLKLGIDDDNSVQNALV 459

Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
            +Y+ CG   +A  +F  +  + +V WN+++  F Q+G+ + AI LF  M    +  D  
Sbjct: 460 TLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGSEVAAIQLFDLMQEEGICPDAY 519

Query: 501 TFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
           TF+  + +CS +G +++G ++ +     Y +   +   T + D+ A+ G    A    D+
Sbjct: 520 TFVGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTCMVDLLARAGRFCDAMDFIDA 579

Query: 560 MS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
           M  E + + W A++    +HG L       K++L+  I P++ +   IL +   S  + +
Sbjct: 580 MPYEPDQILWEALLASCKVHGNLGLGRIAAKKILE--ITPHDYSAYIILSSIHASVDMWD 637

Query: 619 GKFY 622
            K++
Sbjct: 638 EKYW 641



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 246/486 (50%), Gaps = 11/486 (2%)

Query: 3   LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   C+  R +    ++HA +   G+  D   +  L++ YA+ G + SS   F    +  
Sbjct: 118 LVAGCSRARDVDAGMQVHACVAKFGVDEDDSVAAALVDMYAKCGWVDSSWRAFTLAPQRS 177

Query: 60  SFMWAVLIKCYM---WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
              W  +I C +    + +++ S+LL+ KM+  +   +N  Y  +L+   +   L  G +
Sbjct: 178 VLSWTSMIACLVNQGSSGYYDTSLLLFKKMLALKVWPTNATYSCILKVFDTPDLLSVGMQ 237

Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
           +HG ++K G + D  + T+++  YG  G +D+  ++  ++   D +S ++++ +Y     
Sbjct: 238 LHGCLLKMGTEVDTALGTALMTMYGRCGGVDEIPRLACRI-RHDALSRTALLGAYARTGY 296

Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
            +E + +F  M+ + +  D   M  + + C     LR  R +H + L+   K+D  L N+
Sbjct: 297 NAEAIGVFKEMIMKNMAIDQSAMTGMLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNA 356

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
            I +Y +CGD+ SAE  F  +E+    SWTA+++CY ++G  ++ L  F KML       
Sbjct: 357 TITVYGRCGDINSAETVFYLMEENDIISWTALLTCYTQNGLDEEVLLFFRKMLRKGLGSP 416

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           +  + +VL + + +  L  G  +H + ++ G+  + + +  AL+  YA CG +    K+ 
Sbjct: 417 VFCITSVLRASSSISNLAVGLQIHSRTLKLGIDDD-NSVQNALVTLYANCGSVQVALKIF 475

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
           +++  R+I++WN L++ +++ G    A++L   MQ  G+ PD+++    LS+C  +G ++
Sbjct: 476 NSMSNRDIVTWNALLTSFSQHGSEVAAIQLFDLMQEEGICPDAYTFVGLLSSCSRMGLVK 535

Query: 417 LGLQIHGHVI-KIDCKDEFVQ-SSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMICG 473
            G +    +  K + + + V  + ++D+ ++ G F +    +     +   ++W +++  
Sbjct: 536 EGCEYFNEMKEKYNLEPKMVHYTCMVDLLARAGRFCDAMDFIDAMPYEPDQILWEALLAS 595

Query: 474 FYQNGN 479
              +GN
Sbjct: 596 CKVHGN 601


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 186/547 (34%), Positives = 293/547 (53%), Gaps = 50/547 (9%)

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
           F V+      L  A   F  I++     W  M   +  S     AL  +V M+ +   PN
Sbjct: 28  FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPN 87

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD---YLGPALIEFYAECGKMSECE 353
             T   +L SCA     REG+ +H  +++ G    YD   Y+  +LI  Y + G++ +  
Sbjct: 88  CYTFPFLLKSCAKSKAFREGQQIHGHVLKLG----YDLDLYVHTSLISMYVQNGRLEDAR 143

Query: 354 KVIHAIGERNILS-------------------------------WNMLISEYARKGMSKE 382
           KV      R+++S                               WN +IS YA  G +KE
Sbjct: 144 KVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKE 203

Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG----HVIKIDCKDEFVQSS 438
           ALEL  +M    + PD  ++ S +SAC    S++LG Q+H     H    + K   + ++
Sbjct: 204 ALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLK---IVNA 260

Query: 439 LIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMD 498
           LID+Y KCG    A  LFE +  K V+ WN++I G+       EA+ LF +M  +    +
Sbjct: 261 LIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPN 320

Query: 499 EVTFLTAIQACSNIGQLEKGKWVH---HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
           +VT L+ + AC+++G +E G+W+H   +K +  GV       T+L DMYAKCGD++ AQ+
Sbjct: 321 DVTMLSILPACAHLGAIEIGRWIHVYINKRLK-GVANASSHRTSLIDMYAKCGDIEAAQQ 379

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
           VFDS+  R++ SW+AMI  + MHG+ N A  +F +M  + I+P+++TF+ +L ACSHSG 
Sbjct: 380 VFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGM 439

Query: 616 VEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           ++ G+  F +M+  + + P L+HY CM+DLL  SG  + A +MI++M    +G IW +LL
Sbjct: 440 LDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 499

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             C++H  +++ ++  + L      + G Y LLSNIYA  G W+E  K+R+++   G+KK
Sbjct: 500 KACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKK 559

Query: 735 VPGYSTI 741
           VPG S+I
Sbjct: 560 VPGCSSI 566



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 248/507 (48%), Gaps = 42/507 (8%)

Query: 13  LTRLHAHLLVTGLHYDPPASTRLIES---YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           L  +HA ++ TGLH    A ++LIE          L  +  VF+T +EP+  +W  + + 
Sbjct: 3   LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
           +  ++    ++ LY  MI      + + +P +L++C+       G+++HG ++K G+D D
Sbjct: 63  HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSR------------------------------ 159
             + TS++  Y + G L+DARKVFD+ + R                              
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182

Query: 160 -DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
            DVVSW+++I+ Y +  +  E L++F  M++  V PD  TM+S+  AC +  S+   R +
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H  +       +  + N+ I +Y KCG++ +A   F  +  +   SW  +I  Y     +
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302

Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR--KGMGPEYDYLG 336
           ++AL  F +ML   E PN +T++++L +CA LG +  G+ +H  I +  KG+     +  
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR- 361

Query: 337 PALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
            +LI+ YA+CG +   ++V  +I  R++ SWN +I  +A  G +  A ++  +M+   + 
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHV---IKIDCKDEFVQSSLIDMYSKCG-FKNLA 452
           PD  +    LSAC + G L LG  I   +    KI  K E     +ID+    G FK   
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHY-GCMIDLLGHSGLFKEAE 480

Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGN 479
            ++     +   V+W S++     +GN
Sbjct: 481 EMINTMEMEPDGVIWCSLLKACKMHGN 507



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 208/407 (51%), Gaps = 41/407 (10%)

Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEF---YAECGKMSECEKVIHAIGERNILSWNMLISE 373
           + +H Q+I+ G+    +Y    LIEF         +     V   I E N+L WN +   
Sbjct: 4   RMIHAQMIKTGLH-NTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62

Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-D 432
           +A       AL L V M + GL+P+ ++    L +C    + + G QIHGHV+K+    D
Sbjct: 63  HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122

Query: 433 EFVQSSLIDMYSK--------------------------CGFKNLAYL-----LFERIQQ 461
            +V +SLI MY +                           G+ +  Y+     +F+ I  
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182

Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
           K VV WN+MI G+ + GN+ EA+ LF +M    +  DE T ++ + AC+    +E G+ V
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
           H  +  +G   ++ I  AL D+Y KCG+++TA  +F+ +S ++V+SW+ +I  Y      
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302

Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF---YFNAMRIFGVEPDLQHY 638
            +A  LF++ML SG  PN+VT ++IL AC+H G++E G++   Y N  R+ GV     H 
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK-RLKGVANASSHR 361

Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
             ++D+ ++ GDIE A ++  S+    + S W A++ G  +H R + 
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANA 407


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  311 bits (796), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 173/552 (31%), Positives = 300/552 (54%), Gaps = 9/552 (1%)

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAER 252
           D + +L L+    +  +L+  ++IH H++      +  +   NS I  Y+K   +  A  
Sbjct: 31  DLIKLLKLS---ADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHN 87

Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLG 311
            F ++ +R   SW+A+++ Y  +G+  K +     M+ E    PN   L   + SC   G
Sbjct: 88  LFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRG 147

Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
            + EG+  H  +++ G    ++Y+  AL+  Y++C  + +   V + +   +I+++N ++
Sbjct: 148 RVEEGRQCHGLLLKTGFS-FHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSIL 206

Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
           S     G  +E LE+L  M +  +  D  +  ++ S C ++  L+LGL +HG ++  D +
Sbjct: 207 SSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVE 266

Query: 432 -DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
            D +V S++I+MY KCG   +A  +F+ +Q ++VV+W +++   +QNG   EA+NLF +M
Sbjct: 267 CDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKM 326

Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
               ++ +E T+   + AC+ +     G  +H      G +  + +  AL +MYAK GD+
Sbjct: 327 EQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDI 386

Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
           + A++VF  M  R++++W+AMI  +  HG    A  +F+ ML +   PN VTF  +L AC
Sbjct: 387 EAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSAC 446

Query: 611 SHSGSVEEGKFYFNA-MRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
            H G V+EG +Y +  M+ FGV+P L+HY C+V LLS++G +  A   + + P   +   
Sbjct: 447 GHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVA 506

Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEV 729
           W  LLN C +H+   + + + + +     ND G YTLLSNIYA+E  WD   KVR +M  
Sbjct: 507 WRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRD 566

Query: 730 TGLKKVPGYSTI 741
             +KK PG S I
Sbjct: 567 KKIKKEPGVSWI 578



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 241/491 (49%), Gaps = 21/491 (4%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPP--ASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           + L     NL+    +H+HL+VT    +        LI  YA++  +  +  +FD   E 
Sbjct: 36  LKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPER 95

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKV 117
           +   W+ L+  Y+ N F  + I L   MI E     N +I    + +C   G +  G + 
Sbjct: 96  NVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQC 155

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           HG ++K GF   + ++ +++  Y +   + DA  V++++   D+V+++SI++S  +N  +
Sbjct: 156 HGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYL 215

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
            EGL++  SMV E V+ D VT ++    C  L  LR    +HG +L   ++ D  + ++ 
Sbjct: 216 REGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAI 275

Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTA-MISCYNRSGWFQKALESFVKMLEVKEEPN 296
           I MY KCG  L A   F  ++ R    WTA M SC+ ++G F++AL  F KM +   + N
Sbjct: 276 INMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCF-QNGCFEEALNLFSKMEQENVKSN 334

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T   +L +CAGL   R G  +H    + G    +  +G ALI  YA+ G +   +KV 
Sbjct: 335 EFTYAVLLNACAGLSARRNGSLLHGHSEKSGF-KHHVMVGNALINMYAKSGDIEAAKKVF 393

Query: 357 HAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQ 416
             +  R+I++WN +I  ++  G+ K+AL +   M      P+  +    LSACG++G +Q
Sbjct: 394 SDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQ 453

Query: 417 LGLQIHGHVIKIDCKDEF-VQSSL------IDMYSKCGFKNLAYLLFERIQQK-SVVMWN 468
            G     H++K     +F VQ  L      + + SK G  N A         K  VV W 
Sbjct: 454 EGFYYLHHLMK-----QFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWR 508

Query: 469 SMI--CGFYQN 477
           +++  C  +QN
Sbjct: 509 TLLNACHVHQN 519



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 186/379 (49%), Gaps = 6/379 (1%)

Query: 17  HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFF 76
           H  LL TG  +       L+  Y++   ++ +  V++     D   +  ++   + N + 
Sbjct: 156 HGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYL 215

Query: 77  EESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSI 136
            E + +   M+ E        + +    C+SL DL  G  VHG+++    + D  + ++I
Sbjct: 216 REGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAI 275

Query: 137 LCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDF 196
           +  YG+ G    AR VFD + SR+VV W++++AS F N    E L +F  M +E V+ + 
Sbjct: 276 INMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNE 335

Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
            T   L  AC  L + R    +HGH  +   K    +GN+ I MY+K GD+ +A++ F  
Sbjct: 336 FTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSD 395

Query: 257 IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREG 316
           +  R   +W AMI  ++  G  +KAL  F  ML  +E PN +T   VL +C  LG ++EG
Sbjct: 396 MMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEG 455

Query: 317 -KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-NILSWNMLISE- 373
              +H  + + G+ P  ++    ++   ++ G+++E    +     + ++++W  L++  
Sbjct: 456 FYYLHHLMKQFGVQPGLEHY-TCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNAC 514

Query: 374 --YARKGMSKEALELLVQM 390
             +   G+ +   E +++M
Sbjct: 515 HVHQNYGLGRWVAEFVLEM 533



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 13/311 (4%)

Query: 4   FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           F  C +L+ L     +H  +L + +  D   S+ +I  Y + G    +R VFD  +  + 
Sbjct: 241 FSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNV 300

Query: 61  FMW-AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
            +W AV+  C+  N  FEE++ L+ KM +E    + F Y  +L AC+ L    +G  +HG
Sbjct: 301 VLWTAVMASCFQ-NGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHG 359

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
              K GF    ++  +++  Y + G ++ A+KVF  M  RD+++W+++I  +  +    +
Sbjct: 360 HSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKK 419

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            L +F  M+     P++VT   +  ACG L  ++       H++++     G    + IV
Sbjct: 420 ALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIV 479

Query: 240 -MYSKCGDLLSAERTFVKIE--KRCTTSWTAMI-SCYNRSGWFQKALESFVKMLEVKEEP 295
            + SK G L  A R F++    K    +W  ++ +C+    +    L  +V    ++ +P
Sbjct: 480 SLLSKTGQLNEA-RNFMRTAPVKWDVVAWRTLLNACHVHQNY---GLGRWVAEFVLEMDP 535

Query: 296 NLITLITVLGS 306
           N +   T+L +
Sbjct: 536 NDVGTYTLLSN 546


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 319/607 (52%), Gaps = 16/607 (2%)

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L  AR+VFD++  RD VSW++++A+   +    E  ++  +M  +G+  +   + S   +
Sbjct: 43  LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102

Query: 206 CGELCSLRPA--RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
                + RPA    +    L+  +  +    ++ + +Y+KCG +  A + F  + +R T 
Sbjct: 103 AA--VARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTV 160

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW A+I+ Y  SG    ALE F++M      P+  T  ++L +  G       + +H +I
Sbjct: 161 SWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQ-LHGKI 219

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGMSKE 382
           ++ G       L  A I  Y++CG + +  ++   IG+ R+++SWN ++  Y   GM  E
Sbjct: 220 VKYGSALGLTVLNAA-ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDE 278

Query: 383 ALELLVQM-QTWGLMPDSFSVASSLSACGNVG-SLQLGLQIHGHVIKIDCKD-EFVQSSL 439
           A++  V+M Q  G+ PD +S  S +S+C   G     G  IHG VIK   +    V ++L
Sbjct: 279 AMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNAL 338

Query: 440 IDMYSK----CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
           I MY++    C  ++ AY  F  +  K  V WNSM+ G+ Q+G S +A+  F  M    +
Sbjct: 339 IAMYTRYNENCMMED-AYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENV 397

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             DE  F  A+++ S +  L+ GK +H  +I  G   + ++ ++L  MY+K G +  A++
Sbjct: 398 RTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARK 457

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
            F+   + + V W+AMI  Y  HGQ  +   LF +ML      + +TF+ ++ +CSH+G 
Sbjct: 458 SFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGL 517

Query: 616 VEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V+EG    N M   +GV   ++HYAC VDL  R+G ++ A K+I SMPF  +  +W  LL
Sbjct: 518 VDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLL 577

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CRIH  +++   +   L V     +  Y LLS++Y+  G W +   V+ +M+  GL K
Sbjct: 578 GACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSK 637

Query: 735 VPGYSTI 741
           VPG+S I
Sbjct: 638 VPGWSWI 644



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 284/558 (50%), Gaps = 13/558 (2%)

Query: 45  LRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRA 104
           L ++R VFD     D   W  L+     +    E+  L   M  +    + F   S LR+
Sbjct: 43  LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102

Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
            +       G ++    +K G   +    +++L  Y + G + DAR+VFD M  R+ VSW
Sbjct: 103 AAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSW 162

Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVL 223
           +++IA Y ++ D++  L++F  M REG+ PD  T  SL  A  G  C L     +HG ++
Sbjct: 163 NALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFL--MHQLHGKIV 220

Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWTAMISCYNRSGWFQKAL 282
           +    +   + N+ I  YS+CG L  + R F  I + R   SW AM+  Y  +G   +A+
Sbjct: 221 KYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAM 280

Query: 283 ESFVKML-EVKEEPNLITLITVLGSCAGLGW-LREGKSVHCQIIR---KGMGPEYDYLGP 337
           + FV+M+ E    P++ +  +++ SC+  G    +G+ +H  +I+   +G+ P  + L  
Sbjct: 281 KFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNAL-I 339

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           A+   Y E   M +  K  +++  ++ +SWN +++ Y++ G+S +AL+    M +  +  
Sbjct: 340 AMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRT 399

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
           D ++ +++L +   +  LQLG QIHG VI      ++FV SSLI MYSK G  + A   F
Sbjct: 400 DEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSF 459

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
           E   + S V WN+MI G+ Q+G +     LF++M      +D +TF+  I +CS+ G ++
Sbjct: 460 EEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVD 519

Query: 517 KGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDC 574
           +G  + + +   YGV   +       D+Y + G L  A+++ DSM  E + + W  ++  
Sbjct: 520 EGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGA 579

Query: 575 YGMHGQLNDAASLFKQML 592
             +HG +  A+ +   + 
Sbjct: 580 CRIHGNVELASDVASHLF 597



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 248/569 (43%), Gaps = 52/569 (9%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
            +L +  L +GL  +  A++ L++ YA+ G +R +R VFD   E ++  W  LI  Y  +
Sbjct: 113 AQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTES 172

Query: 74  NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQ 133
                ++ L+ +M RE        + S+L A           ++HG+I+K G      + 
Sbjct: 173 GDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLTVL 231

Query: 134 TSILCTYGEFGCLDDARKVFDKMTS-RDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-G 191
            + +  Y + G L D+R++FD +   RD++SW++++ +Y  N    E +K F  M++E G
Sbjct: 232 NAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESG 291

Query: 192 VEPDFVTMLSLAEACGELC-SLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD---L 247
           V PD  +  S+  +C E        R IHG V++  ++   P+ N+ I MY++  +   +
Sbjct: 292 VHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMM 351

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
             A + F  +  + T SW +M++ Y++ G    AL+ F  M       +       L S 
Sbjct: 352 EDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSS 411

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           + L  L+ GK +H  +I  G     D++  +LI  Y++ G + +  K      + + + W
Sbjct: 412 SELAVLQLGKQIHGLVIHSGFASN-DFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPW 470

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N +I  YA+ G ++    L  +M       D  +    +++C + G +  G +I      
Sbjct: 471 NAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI------ 524

Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG---FYQNGNSLEAI 484
                      L  M +K G          R++  +        CG   + + G   +A 
Sbjct: 525 -----------LNTMETKYGVP-------LRMEHYA--------CGVDLYGRAGQLDKAK 558

Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV-HHKLISYGVRKDIYIDTALTDM 543
            L   M     E D + ++T + AC   G +E    V  H  ++   +   Y+   L+ M
Sbjct: 559 KLIDSM---PFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYV--LLSSM 613

Query: 544 YAKCG---DLQTAQRVFDSMSERNVVSWS 569
           Y+  G   D  T QRV        V  WS
Sbjct: 614 YSGLGMWSDRATVQRVMKKRGLSKVPGWS 642


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 172/439 (39%), Positives = 265/439 (60%), Gaps = 15/439 (3%)

Query: 311 GWLREGKSVHCQIIRKGMGPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
           G L +GK +HC +++  +G E+D ++  +L+  Y+  G + +  K+   +  R+  SWN 
Sbjct: 8   GDLLDGKKIHCLVLK--LGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNA 65

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +IS Y + G + EAL++  +M+  G+  D+ +VAS L  C  VG +  G  IH +VIK  
Sbjct: 66  MISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHG 125

Query: 430 CKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
            + E FV ++LI+MY+K G    A  +F  +  K VV WN++I G+ QNG + EAI    
Sbjct: 126 LEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAI---- 180

Query: 489 QMYLNCLEMDEV-----TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
           ++YL   E +E+     T+++ + A S++G L++G  +H ++I   +  D+++ T L DM
Sbjct: 181 EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDM 240

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           Y KCG L  A  +F  +  +N V W+AMI CYG+HG    A  LF++M    +KP+ +TF
Sbjct: 241 YGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITF 300

Query: 604 MNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
           +++L ACSHSG V + ++ FN M   +G++P L+HY CMVDL  R+G++E AF  I  MP
Sbjct: 301 VSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP 360

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
              + S WGALLN CRIH  I++ K   + L    + + GYY LLSNIYA  G W+    
Sbjct: 361 IQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDD 420

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           VRS+    GL+K PG+S+I
Sbjct: 421 VRSLARDRGLRKNPGWSSI 439



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 210/388 (54%), Gaps = 15/388 (3%)

Query: 99  PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTS 158
           P V++AC   GDL  G+K+H  ++K GF+ D  +  S++  Y  FG + DARK+FD M +
Sbjct: 1   PPVVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57

Query: 159 RDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
           RD  SW+++I+ Y  N + +E L +   M  EGV+ D +T+ S+   C ++  +   + I
Sbjct: 58  RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117

Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
           H +V++  ++ +  + N+ I MY+K G L  A++ F  + K    SW  +I+ Y ++G  
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKD-VVSWNTLITGYAQNGLA 176

Query: 279 QKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            +A+E ++ M E +E  PN  T +++L + + +G L++G  +H Q+I+  +  +  ++G 
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDV-FVGT 235

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
            LI+ Y +CGK+ +   + + +  +N + WN +IS Y   G  ++ALEL  +M+   + P
Sbjct: 236 CLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKP 295

Query: 398 DSFSVASSLSACGNVGSLQ-----LGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLA 452
           D  +  S LSAC + G +        +    + IK   K       ++D++ + G   +A
Sbjct: 296 DHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKH---YGCMVDLFGRAGELEMA 352

Query: 453 YLLFERIQ-QKSVVMWNSMICGFYQNGN 479
           +   +++  Q     W +++     +GN
Sbjct: 353 FNFIKKMPIQPDASAWGALLNACRIHGN 380



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 212/447 (47%), Gaps = 36/447 (8%)

Query: 2   PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 61
           P+ ++C +L    ++H  +L  G  +D   +  L+  Y+  G +  +R +FD     D  
Sbjct: 2   PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
            W  +I  Y  N    E++ +  +M  E   +      SVL  C+ +GD+ SG+ +H  +
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121

Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
           IK G + +  +  +++  Y +FG L  A+KVF  +  +DVVSW+++I  Y  N   SE +
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAI 180

Query: 182 KMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
           +++  M   E + P+  T +S+  A   + +L+    IHG V++  +  D  +G   I M
Sbjct: 181 EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDM 240

Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
           Y KCG L  A   F ++ ++ +  W AMISCY   G  +KALE F +M   + +P+ IT 
Sbjct: 241 YGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITF 300

Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
           +++L +C+  G + + +                            C  M E E  I    
Sbjct: 301 VSLLSACSHSGLVSDAQW---------------------------CFNMMEEEYGI---- 329

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           + ++  +  ++  + R G  + A   + +M    + PD+ +  + L+AC   G+++LG  
Sbjct: 330 KPSLKHYGCMVDLFGRAGELEMAFNFIKKMP---IQPDASAWGALLNACRIHGNIELGKH 386

Query: 421 IHGHVIKIDCKDEFVQSSLIDMYSKCG 447
               + ++D ++      L ++Y+  G
Sbjct: 387 ASERLFEVDSENVGYYVLLSNIYANVG 413



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           +P +     L++  R+H  ++   L+ D    T LI+ Y + G L  +  +F      +S
Sbjct: 203 LPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNS 262

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG 109
             W  +I CY  +   E+++ L+ +M  E+    +  + S+L ACS  G
Sbjct: 263 VPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSG 311


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 319/607 (52%), Gaps = 16/607 (2%)

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           L  AR+VFD++  RD VSW++++A+   +    E  ++  +M  +G+  +   + S   +
Sbjct: 43  LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102

Query: 206 CGELCSLRPA--RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
                + RPA    +    L+  +  +    ++ + +Y+KCG +  A + F  + +R T 
Sbjct: 103 AA--VARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTV 160

Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
           SW A+I+ Y  SG    ALE F++M      P+  T  ++L +  G       + +H +I
Sbjct: 161 SWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQ-LHGKI 219

Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYARKGMSKE 382
           ++ G       L  A I  Y++CG + +  ++   IG+ R+++SWN ++  Y   GM  E
Sbjct: 220 VKYGSALGLTVLNAA-ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDE 278

Query: 383 ALELLVQM-QTWGLMPDSFSVASSLSACGNVG-SLQLGLQIHGHVIKIDCKD-EFVQSSL 439
           A++  V+M Q  G+ PD +S  S +S+C   G     G  IHG VIK   +    V ++L
Sbjct: 279 AMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNAL 338

Query: 440 IDMYSK----CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
           I MY++    C  ++ AY  F  +  K  V WNSM+ G+ Q+G S +A+  F  M    +
Sbjct: 339 IAMYTRYNENCMMED-AYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENV 397

Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
             DE  F  A+++ S +  L+ GK +H  +I  G   + ++ ++L  MY+K G +  A++
Sbjct: 398 RTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARK 457

Query: 556 VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGS 615
            F+   + + V W+AMI  Y  HGQ  +   LF +ML      + +TF+ ++ +CSH+G 
Sbjct: 458 SFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGL 517

Query: 616 VEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
           V+EG    N M   +GV   ++HYAC VDL  R+G ++ A K+I SMPF  +  +W  LL
Sbjct: 518 VDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLL 577

Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
             CRIH  +++   +   L V     +  Y LLS++Y+  G W +   V+ +M+  GL K
Sbjct: 578 GACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSK 637

Query: 735 VPGYSTI 741
           VPG+S I
Sbjct: 638 VPGWSWI 644



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 299/591 (50%), Gaps = 16/591 (2%)

Query: 14  TRLHAHLLVTGLHYDPPASTRLIESYAEMGS--LRSSRLVFDTFKEPDSFMWAVLIKCYM 71
            R HA LL +G+   P    +L+ +Y+      L ++R VFD     D   W  L+    
Sbjct: 11  ARSHASLLKSGV-AAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQA 69

Query: 72  WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
            +    E+  L   M  +    + F   S LR+ +       G ++    +K G   +  
Sbjct: 70  ASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVF 129

Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
             +++L  Y + G + DAR+VFD M  R+ VSW+++IA Y ++ D++  L++F  M REG
Sbjct: 130 AASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG 189

Query: 192 VEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           + PD  T  SL  A  G  C L     +HG +++    +   + N+ I  YS+CG L  +
Sbjct: 190 LAPDEATFASLLTAVEGPSCFL--MHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDS 247

Query: 251 ERTFVKI-EKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCA 308
            R F  I + R   SW AM+  Y  +G   +A++ FV+M+ E    P++ +  +++ SC+
Sbjct: 248 RRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCS 307

Query: 309 GLGW-LREGKSVHCQIIR---KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
             G    +G+ +H  +I+   +G+ P  + L  A+   Y E   M +  K  +++  ++ 
Sbjct: 308 EHGHDDHQGRVIHGLVIKSALEGVTPVCNAL-IAMYTRYNENCMMEDAYKCFNSLVLKDT 366

Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
           +SWN +++ Y++ G+S +AL+    M +  +  D ++ +++L +   +  LQLG QIHG 
Sbjct: 367 VSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGL 426

Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
           VI      ++FV SSLI MYSK G  + A   FE   + S V WN+MI G+ Q+G +   
Sbjct: 427 VIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENV 486

Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTD 542
             LF++M      +D +TF+  I +CS+ G +++G  + + +   YGV   +       D
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546

Query: 543 MYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           +Y + G L  A+++ DSM  E + + W  ++    +HG +  A+ +   + 
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLF 597



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 2/156 (1%)

Query: 522 HHKLISYGVRKDIYIDTALTDMYAKCGD-LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQ 580
           H  L+  GV      +  LT       D L  A+RVFD +  R+ VSW+A++      G 
Sbjct: 14  HASLLKSGVAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGA 73

Query: 581 LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYAC 640
             +A  L + M   G+  N     + L + + +     G    +     G+  ++   + 
Sbjct: 74  HPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASA 133

Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
           ++D+ ++ G +  A ++   MP   N   W AL+ G
Sbjct: 134 LLDVYAKCGRVRDARQVFDGMP-ERNTVSWNALIAG 168


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 201/648 (31%), Positives = 326/648 (50%), Gaps = 10/648 (1%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           ++ +++   S+L  L    + H +II  G   D V  T +         +D A  +F  +
Sbjct: 12  LFLTLINRVSTLHQL---NQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTI 68

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
            + D+  ++ +I ++  N   S  + ++ H      +EPD  T    A       SL   
Sbjct: 69  PNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTY---AFVISGASSLGLG 125

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
             +H H +      D  +G++ +  Y K   + +A + F  + +R T  W  M+S   ++
Sbjct: 126 LLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKN 185

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
             F +A+  F  M++     +  T+  VL   A L  L  G  + C  ++ G    + Y+
Sbjct: 186 SCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFH-SHAYV 244

Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
              L   Y++CG++     +   IG+ +++S+N +IS Y     ++ ++ L  ++   G 
Sbjct: 245 ITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGE 304

Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYL 454
             +S S+   +      G L L   IHG   K          ++L  +YS+      A L
Sbjct: 305 KVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARL 364

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           LF+   +KS+  WN+MI G+ QNG + +AI+LF +M    +  + VT  + + AC+ +G 
Sbjct: 365 LFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGA 424

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           L  GKWVH  +       +I++ TAL DMYAKCG +  AQR+F  M E+N V+W+AMI  
Sbjct: 425 LSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISG 484

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
           YG+HG  ++A +LF +ML S + P  VTF+++L+ACSH+G V EG   F +M    G EP
Sbjct: 485 YGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEP 544

Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
             +HYACMVDLL R+G+++ A   I  MP      +WGALL  C IHK  ++ +    +L
Sbjct: 545 LPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKL 604

Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
                 + GYY LLSNIY+   N+ E   VR +++   L K PG + I
Sbjct: 605 FELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLI 652



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/635 (26%), Positives = 298/635 (46%), Gaps = 15/635 (2%)

Query: 1   MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
           + L    + L +L + HA +++ GLH D    T+L    + + ++  + L+F T   PD 
Sbjct: 14  LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDL 73

Query: 61  FMWAVLIKCYMWNNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHG 119
           F++ VLI+ +  NN    ++ LY  + +       NF Y  V+   SSLG          
Sbjct: 74  FLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS- 132

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
             I  GF  D  + ++I+  Y +F  +  ARKVFD M  RD V W+++++    N+   E
Sbjct: 133 --IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDE 190

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
            + +F  MV+ G+  D  T+ ++     EL  L     I    ++        +      
Sbjct: 191 AILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLAC 250

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
           +YSKCG++ +A   F +I +    S+ AMIS Y  +   + ++  F ++L   E+ N  +
Sbjct: 251 LYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310

Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
           ++ ++      G L   + +H     K        +  AL   Y+   ++     +    
Sbjct: 311 IVGLIPVFFPFGHLHLTRCIH-GFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369

Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
            E+++ SWN +IS YA+ G++++A+ L  +MQ   + P+  +V S LSAC  +G+L LG 
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429

Query: 420 QIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
            +H  + +   +   FV ++LIDMY+KCG    A  LF  + +K+ V WN+MI G+  +G
Sbjct: 430 WVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHG 489

Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYID 537
              EA+NLF++M  + +    VTFL+ + ACS+ G + +G  +   ++  +G        
Sbjct: 490 YGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHY 549

Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
             + D+  + G+L  A      M  E     W A++    +H   N A     ++ +  +
Sbjct: 550 ACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFE--L 607

Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV 631
            P  V +  +L     S     G+ Y  A  + GV
Sbjct: 608 DPQNVGYYVLL-----SNIYSAGQNYPEAASVRGV 637


>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
          Length = 598

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 184/598 (30%), Positives = 321/598 (53%), Gaps = 28/598 (4%)

Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVE----PDFVTMLSLAEACGELCSLRPARSIH 219
           W ++I  +  +A+    +  F ++ R   E     D     SL +AC  L ++R  RSIH
Sbjct: 4   WLTMIRRHASDANPFHAISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREGRSIH 63

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT-------FVKIEKRCTTSWTAMISCY 272
            HVLR  +  +  + N+ + +YS      SAE++       F KI ++   +   MIS +
Sbjct: 64  CHVLRFGLDYNVNVLNALVYLYS------SAEKSMGCACALFDKIPEKTIVTVNCMISGF 117

Query: 273 NRSGWFQKALESFVKML----EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
            ++  F   +  F ++L    +++ +PN +TL+ ++  C   G    G S+H    +  +
Sbjct: 118 VKNKRFHAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSL 177

Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
             + + +  ALI  YAE   M    K+ H    R+++SWN +I+ YA+    + A  L  
Sbjct: 178 DLKNE-VRNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFR 236

Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV--QSSLIDMYSKC 446
           +M+   +  D  S+ S +SAC N   L +G  +H   IK+   +  +  +++LI+MYSKC
Sbjct: 237 EMRIGNVECDRVSLVSLISACTNXRDLHMGKAVHA-FIKVSGMEMMIHFETALINMYSKC 295

Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
           G   L   +F+ +  +++  WNSMI G+ + G ++EA++L++ +    ++ DEVT L  I
Sbjct: 296 GSIELGRKVFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLI 355

Query: 507 QACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
            AC + G L +G  ++  + S   +     +  AL DMYAKCG +  A+ VF  M  R+V
Sbjct: 356 SACRSSGDLHQGIQINSYIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDV 415

Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
           +SW+++I  Y ++G+  +A   F++M    I+PN VTF+ +L AC H+G V++GK  ++ 
Sbjct: 416 ISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDI 475

Query: 626 M-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
           M + + +EP ++H  CMVD+ +R+G +E A+K +  MP   N  +W  L+N CR+H   +
Sbjct: 476 MCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVWRMLINACRVHGDFN 535

Query: 685 V-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           + +  +   + V   +    + + SNI+AE G WD+  + RS+M      K+PG S+I
Sbjct: 536 LGLNLVSGLIDVKTEHGPEDHVISSNIFAEAGRWDDVLQERSLMVAQKAVKLPGKSSI 593



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 262/519 (50%), Gaps = 17/519 (3%)

Query: 88  REQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYG----E 142
           RE A + + F+Y S+++AC+ L  +  G  +H  +++ G D +  +  +++  Y      
Sbjct: 32  RENAPLDDHFVYASLIKACNRLSAIREGRSIHCHVLRFGLDYNVNVLNALVYLYSSAEKS 91

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG----VEPDFVT 198
            GC   A  +FDK+  + +V+ + +I+ +  N     G+ +F+ ++  G    V+P++VT
Sbjct: 92  MGC---ACALFDKIPEKTIVTVNCMISGFVKNKRFHAGVGLFNRVLGGGFDLRVKPNYVT 148

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           ++ L   C E        S+H +  +  + +   + N+ I +Y++   + +A + F +  
Sbjct: 149 LVILISGCVEFGRFSIGNSLHSYCCKTSLDLKNEVRNALIHLYAEFEYMDAAAKLFHETN 208

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKS 318
            R   SW  MI+ Y ++   + A   F +M     E + ++L++++ +C     L  GK+
Sbjct: 209 VRDLVSWNTMIAGYAKNNDCRNAFSLFREMRIGNVECDRVSLVSLISACTNXRDLHMGKA 268

Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
           VH  I   GM     +   ALI  Y++CG +    KV   + + NI SWN +I  Y   G
Sbjct: 269 VHAFIKVSGM-EMMIHFETALINMYSKCGSIELGRKVFDELADENIASWNSMIYGYVECG 327

Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQ 436
            + EAL L   +Q+  + PD  ++   +SAC + G L  G+QI+ ++   D       + 
Sbjct: 328 FNIEALSLWNVIQSRKIKPDEVTMLGLISACRSSGDLHQGIQINSYIESSDHLSGSTVLC 387

Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE 496
           ++LIDMY+KCG  + A  +F ++ ++ V+ W S+I G+  NG   EA+  F +M    +E
Sbjct: 388 NALIDMYAKCGSMDRAETVFSKMPRRDVISWTSIIVGYAINGEGEEALLAFRKMGAEKIE 447

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQR 555
            + VTFL  + AC + G ++KGK ++  +   Y +   I     + DM+A+ G L+ A +
Sbjct: 448 PNSVTFLGVLSACDHAGLVDKGKNLYDIMCKYYHIEPKIEHCGCMVDMHARAGMLEEAYK 507

Query: 556 VFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
               M  E N V W  +I+   +HG  N   +L   ++D
Sbjct: 508 FVKDMPVEPNAVVWRMLINACRVHGDFNLGLNLVSGLID 546



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 227/499 (45%), Gaps = 19/499 (3%)

Query: 3   LFRSCTNL---RKLTRLHAHLLVTGLHYDPPASTRLIESYAEM-GSLRSSRLVFDTFKEP 58
           L ++C  L   R+   +H H+L  GL Y+      L+  Y+    S+  +  +FD   E 
Sbjct: 46  LIKACNRLSAIREGRSIHCHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEK 105

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIR---EQATISNFIYPSVL-RACSSLGDLGSG 114
                  +I  ++ N  F   + L+++++    +     N++   +L   C   G    G
Sbjct: 106 TIVTVNCMISGFVKNKRFHAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCVEFGRFSIG 165

Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
             +H    K   D  + ++ +++  Y EF  +D A K+F +   RD+VSW+++IA Y  N
Sbjct: 166 NSLHSYCCKTSLDLKNEVRNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNTMIAGYAKN 225

Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
            D      +F  M    VE D V+++SL  AC     L   +++H  +    +++     
Sbjct: 226 NDCRNAFSLFREMRIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIKVSGMEMMIHFE 285

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
            + I MYSKCG +    + F ++      SW +MI  Y   G+  +AL  +  +   K +
Sbjct: 286 TALINMYSKCGSIELGRKVFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIK 345

Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
           P+ +T++ ++ +C   G L +G  ++  I           L  ALI+ YA+CG M   E 
Sbjct: 346 PDEVTMLGLISACRSSGDLHQGIQINSYIESSDHLSGSTVLCNALIDMYAKCGSMDRAET 405

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V   +  R+++SW  +I  YA  G  +EAL    +M    + P+S +    LSAC + G 
Sbjct: 406 VFSKMPRRDVISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGL 465

Query: 415 LQLGLQIHGHVIKIDCKDEFVQSS------LIDMYSKCGFKNLAYLLFERIQ-QKSVVMW 467
           +  G  ++     I CK   ++        ++DM+++ G    AY   + +  + + V+W
Sbjct: 466 VDKGKNLY----DIMCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVW 521

Query: 468 NSMICGFYQNGNSLEAINL 486
             +I     +G+    +NL
Sbjct: 522 RMLINACRVHGDFNLGLNL 540


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 184/547 (33%), Positives = 294/547 (53%), Gaps = 46/547 (8%)

Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPN 296
           F ++      L  A   F  I +     W  M   +  S     AL+ +V M+ +   PN
Sbjct: 15  FCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPN 74

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
             T   +L SCA     +EG+ +H  +++ G   +  Y+  +LI  YA+ G++ + +KV 
Sbjct: 75  FFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDL-YVHTSLISMYAQNGRLEDAQKVF 133

Query: 357 HAIGERNILS-------------------------------WNMLISEYARKGMSKEALE 385
                R+++S                               WN +IS YA  G  K+ALE
Sbjct: 134 DRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALE 193

Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG----HVIKIDCKDEFVQSSLID 441
           L  +M    + PD  ++A+ +SAC   GS++LG Q+H     H    + K   + ++LID
Sbjct: 194 LFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLK---IVNALID 250

Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
           +YSKCG    A  L E +  K V+ WN++I G+       EA+ LF +M  +    ++VT
Sbjct: 251 LYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 310

Query: 502 FLTAIQACSNIGQLEKGKWVH----HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
            L+ + AC+++G ++ G+W+H     KL    V     + T+L DMYAKCGD+  A +V 
Sbjct: 311 MLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVS 370

Query: 558 DSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           DS +  R++ +W+AMI  + MHG+ N A  +F +M  +GI+P+++TF+ +L ACSHSG +
Sbjct: 371 DSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 430

Query: 617 EEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           + G+  F +MR  + + P L+HY CM+DLL  SG  + A +MI++MP   +G IW +LL 
Sbjct: 431 DLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 490

Query: 676 GCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL-KK 734
            C+IH  +++ ++  K+L      + G Y LLSNIYA  G W+E  K+R+++   G+ KK
Sbjct: 491 ACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKK 550

Query: 735 VPGYSTI 741
           VPG S+I
Sbjct: 551 VPGCSSI 557



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 245/489 (50%), Gaps = 40/489 (8%)

Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
           F  L  A  VF+ +   + + W+ +   +  ++D    LK++  M+  G+ P+F T   L
Sbjct: 22  FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81

Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL--------------- 247
            ++C +  + +  + IHGHVL+    +D  +  S I MY++ G L               
Sbjct: 82  LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141

Query: 248 ----------------LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
                            SA++ F +I  +   SW AMIS Y  +G ++KALE F +M++ 
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +P+  T+ TV+ +CA  G +  G+ VH  I   G G     +  ALI+ Y++CG++  
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVN-ALIDLYSKCGEVET 260

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             +++  +  ++++SWN LI  Y    + KEAL L  +M   G  P+  ++ S L AC +
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 320

Query: 412 VGSLQLGLQIHGHVIK-----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVV 465
           +G++ +G  IH ++ K     +      +++SLIDMY+KCG  + A  + +     +S+ 
Sbjct: 321 LGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLS 380

Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
            WN+MI GF  +G +  A ++F +M  N +E D++TF+  + ACS+ G L+ G+ +   +
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 440

Query: 526 -ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLND 583
              Y +   +     + D+    G  + A+ + ++M  E + V W +++    +HG L  
Sbjct: 441 RQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLEL 500

Query: 584 AASLFKQML 592
             S  K+++
Sbjct: 501 GESFAKKLI 509



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 204/406 (50%), Gaps = 35/406 (8%)

Query: 51  VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGD 110
           VF+T  EP+  +W ++ + +  ++    ++ LY  MI      + F +P +L++C+    
Sbjct: 31  VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90

Query: 111 LGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR----------- 159
              G+++HG ++K GFD D  + TS++  Y + G L+DA+KVFD+ + R           
Sbjct: 91  FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150

Query: 160 --------------------DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTM 199
                               DVVSW+++I+ Y +  +  + L++F  M++  V+PD  TM
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210

Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEK 259
            ++  AC +  S+   R +H  +       +  + N+ I +YSKCG++ +A      +  
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSV 319
           +   SW  +I  Y     +++AL  F +ML   E PN +T++++L +CA LG +  G+ +
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 330

Query: 320 HCQIIRKGMG---PEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYA 375
           H  I +K  G        L  +LI+ YA+CG +    +V  +    R++ +WN +I  +A
Sbjct: 331 HVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFA 390

Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
             G +  A ++  +M+  G+ PD  +    LSAC + G L LG  I
Sbjct: 391 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 199/427 (46%), Gaps = 39/427 (9%)

Query: 26  HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
           H D  + T LI  YA  G + S++ +FD     D   W  +I  Y     +++++ L+ +
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197

Query: 86  MIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
           M++           +V+ AC+  G +  G +VH  I   GF  +  I  +++  Y + G 
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257

Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
           ++ A ++ + ++++DV+SW+++I  Y       E L +F  M+R G  P+ VTMLS+  A
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317

Query: 206 CGELCSLRPARSIHGHVLRR----KIKIDGPLGNSFIVMYSKCGDLLSAER-TFVKIEKR 260
           C  L ++   R IH ++ ++     +     L  S I MY+KCGD+ +A + +      R
Sbjct: 318 CAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNR 377

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
             ++W AMI  +   G    A + F +M +   EP+ IT + +L +C+  G L  G++  
Sbjct: 378 SLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRN-- 435

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
              I + M  +Y+ + P L E Y  C                       +I      G+ 
Sbjct: 436 ---IFRSMRQDYN-ITPKL-EHYG-C-----------------------MIDLLGHSGLF 466

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLI 440
           KEA E++    T  + PD     S L AC   G+L+LG      +IKI+ ++      L 
Sbjct: 467 KEAEEMI---NTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLS 523

Query: 441 DMYSKCG 447
           ++Y+  G
Sbjct: 524 NIYATAG 530


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 193/652 (29%), Positives = 321/652 (49%), Gaps = 19/652 (2%)

Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
           LR+CS+     +   VH  I++        ++ ++L  Y   G    AR++ D+M   + 
Sbjct: 24  LRSCSAPRHAAA---VHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNA 78

Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHG 220
           VS++ +I +Y         L+ F    R  GV  D  T  +   AC     LR  +++H 
Sbjct: 79  VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138

Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
             +   I     + NS + MY++CGD+  A + F   ++R   SW A++S Y R+G    
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDD 198

Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLG--WLREGKSVHCQIIRKGMGPEYDYLGPA 338
            L  F  M       N   L +V+  CAG     +    +VH  +++ G   +  +L  A
Sbjct: 199 MLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDV-FLASA 257

Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS------KEALELLVQMQT 392
           ++  YA+ G +SE   +  ++ + N++ +N +I+   R   +      +EAL L  ++Q+
Sbjct: 258 MVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQS 317

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKN 450
            G+ P  F+ +S + AC   G ++ G QIHG V+K  C   D+F+ S+LID+Y   G   
Sbjct: 318 RGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLK-HCFQGDDFIGSALIDLYLNSGCME 376

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
             +  F  + ++ VV W +MI G  QN     A+ LFH++    L+ D  T  + + AC+
Sbjct: 377 DGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACA 436

Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
           ++     G+ +       G  +   +  +   MYA+ GD+  A R F  M   ++VSWSA
Sbjct: 437 SLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSA 496

Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IF 629
           +I  +  HG   DA   F +M+D+ + PNE+TF+ +L ACSH G V+EG  Y+  M+  +
Sbjct: 497 VISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEY 556

Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
            + P ++H  C+VDLL R+G +  A   I    F     IW +LL  CRIH+ ++  + +
Sbjct: 557 ALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLV 616

Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
              +     + +  Y  L NIY + G      K+R +M+  G+KK PG S I
Sbjct: 617 ADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWI 668



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 155/649 (23%), Positives = 306/649 (47%), Gaps = 24/649 (3%)

Query: 4   FRSCTNLRKLTRLHAHLLVTGLHYDPPASTR--LIESYAEMGSLRSSRLVFDTFKEPDSF 61
            RSC+  R    +HAH++    H  P    R  L+ +Y  +G    +R + D     ++ 
Sbjct: 24  LRSCSAPRHAAAVHAHIVRA--HPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAV 79

Query: 62  MWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGR 120
            + +LI  Y      E S+  + +  R     ++ F Y + L ACS  G L  G+ VH  
Sbjct: 80  SFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHAL 139

Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
            +  G      +  S++  Y   G +  AR+VFD    RD VSW+++++ Y       + 
Sbjct: 140 SVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDM 199

Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACG--ELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
           L++F  M R G+  +   + S+ + C   +   +  A ++HG V++     D  L ++ +
Sbjct: 200 LRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMV 259

Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMIS--CYNRSG----WFQKALESFVKMLEVK 292
            MY+K G L  A   F  +       + AMI+  C + +       ++AL  + ++    
Sbjct: 260 GMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRG 319

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSEC 352
            EP   T  +V+ +C   G +  GK +H Q+++     + D++G ALI+ Y   G M + 
Sbjct: 320 MEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGD-DFIGSALIDLYLNSGCMEDG 378

Query: 353 EKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV 412
            +   ++ ++++++W  +IS   +  + + AL L  ++   GL PD F+++S ++AC ++
Sbjct: 379 FRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASL 438

Query: 413 GSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI 471
              + G QI     K    +   + +S I MY++ G  + A   F+ ++   +V W+++I
Sbjct: 439 AVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVI 498

Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGV 530
               Q+G + +A+  F++M    +  +E+TFL  + ACS+ G +++G K+       Y +
Sbjct: 499 SSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYAL 558

Query: 531 RKDIYIDTALTDMYAKCGDLQTAQR-VFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFK 589
              I   T + D+  + G L  A+  + DS+     V W +++    +H  +     +  
Sbjct: 559 SPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVAD 618

Query: 590 QMLDSGIKP-NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGV--EPDL 635
           ++++  ++P +  +++N+      +G +       + M+  GV  EP L
Sbjct: 619 RIME--LQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGL 665



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 148/358 (41%), Gaps = 40/358 (11%)

Query: 15  RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
           ++H  +L      D    + LI+ Y   G +      F +  + D   W  +I   + N 
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNE 404

Query: 75  FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
            FE ++ L+H+++        F   SV+ AC+SL    +GE++     K GF +   +  
Sbjct: 405 LFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGN 464

Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
           S +  Y   G +  A + F +M S D+VSWS++I+S+  +    + L+ F+ MV   V P
Sbjct: 465 SCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVP 524

Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
           + +T L +  AC            HG ++   +K                 + +  E   
Sbjct: 525 NEITFLGVLTACS-----------HGGLVDEGLKY---------------YETMKEEYAL 558

Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
               K CT     ++    R+G    A E+F++     +EP  +   ++L SC     + 
Sbjct: 559 SPTIKHCTC----VVDLLGRAGRLADA-EAFIRDSIFHDEP--VIWRSLLASCRIHRDME 611

Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI-----LSW 367
            G+ V  +I+         Y+   L   Y + G++S   K+   + ER +     LSW
Sbjct: 612 RGQLVADRIMELQPSSSASYVN--LYNIYLDAGELSLASKIRDVMKERGVKKEPGLSW 667


>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 218/739 (29%), Positives = 370/739 (50%), Gaps = 86/739 (11%)

Query: 87  IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG--FDKDDVIQTSILCTYGEFG 144
           + +   I   IY  +L+ C    DL  G ++H  +IK G  +  ++ +++ ++  Y +  
Sbjct: 95  LPQHTPIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCN 154

Query: 145 CLDDARKVF-DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
               A   F + + ++++ S+++I+     N    E L  +  M+ +G  PD   + +  
Sbjct: 155 LTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGL 214

Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDG--PLGNSFIVMYSKCGDLLSAERTFVKI--EK 259
           +ACG L  +   R IHG V++   + DG   +  S + MY KCG L  AE+ F ++   K
Sbjct: 215 KACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRK 274

Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKS 318
           R    W +MI  Y ++G   +A+  F KM  E   EP+ ++L     +CA L  + EGK 
Sbjct: 275 RNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQ 334

Query: 319 VHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGE-RNILSWNMLISEYAR 376
            H  +I   MG E +Y LG +++ FY++ G + E E V  ++   ++ ++WN++IS Y +
Sbjct: 335 GHALVIL--MGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQ 392

Query: 377 KGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEF 434
            GM ++ALE+   M +   L  D  +++S L+   +   ++LG ++HG  I+ +   D  
Sbjct: 393 FGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMA 452

Query: 435 VQSSLIDMYSKCGFKNLA--------------------------------YLLFERIQQK 462
           V S ++DMY+KCG  + A                                  LF ++Q +
Sbjct: 453 VLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQME 512

Query: 463 SV----VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT-------------- 504
           SV    V WNS+I GF++NG  +EA ++F +M L+ +  + +T+ T              
Sbjct: 513 SVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEA 572

Query: 505 ---------------------AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
                                A+ AC+N+  L  G+ +H  ++   +   + I T++ DM
Sbjct: 573 SRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDM 632

Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
           YAKCG+L  A+ VF   S + +  ++AMI  Y  HG+  +A +LF++++  GI P+ +TF
Sbjct: 633 YAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITF 692

Query: 604 MNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
            ++L ACSH   ++EG   F  M     ++P  +HY C+V LL+  G ++ A ++I +MP
Sbjct: 693 TSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMP 752

Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
            P +  I G+LL  C  +   ++   I K L     N+ G Y  LSN+YA  G WDE   
Sbjct: 753 SPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVSN 812

Query: 723 VRSIMEVTGLKKVPGYSTI 741
           +R  M+  GLKK+PG S I
Sbjct: 813 IRGFMKEKGLKKIPGCSWI 831


>gi|302756145|ref|XP_002961496.1| hypothetical protein SELMODRAFT_61782 [Selaginella moellendorffii]
 gi|300170155|gb|EFJ36756.1| hypothetical protein SELMODRAFT_61782 [Selaginella moellendorffii]
          Length = 570

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 174/570 (30%), Positives = 311/570 (54%), Gaps = 13/570 (2%)

Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
           H  + + G D+D  +   ++  YG+ G +++A  VF ++  R+V SW+ ++ +  +N   
Sbjct: 4   HRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLS 63

Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKI---KIDGPLG 234
              L++F  M+ EG+ PD V  L + +AC EL  L   R +   ++        +D  + 
Sbjct: 64  ELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFPSSLDPAVL 123

Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY---NRSGWFQKALESFVKMLEV 291
            S + +Y+ CG L +A R F    ++    W +M++ Y    ++G  ++ LE F KML  
Sbjct: 124 TSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTG--RQTLEFFQKMLLE 181

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
               N+++   V+G+C+      +G  VH QI   G+  +  +L  AL+  Y++CG++  
Sbjct: 182 GVAANVVSFTCVVGACSRPELSEQGTVVHEQITCSGLVAD-SFLAAALVNMYSKCGRLGS 240

Query: 352 CEKVIHAIGER-NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
             ++   +  + +++SWN +++ +A++    + LE+   +Q  GL P   ++ S L AC 
Sbjct: 241 AWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGACC 300

Query: 411 NVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWN 468
           +  +L++   I+  V ++     D F+ ++L+  +  CG    A  LF R+ + +   WN
Sbjct: 301 STQALRIVEHIYERVAQVGELSHDLFLGTALMTSFCDCGKLADAESLFYRLNRWNAASWN 360

Query: 469 SMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
           +MI G+ Q+G  L+A++L ++M L  ++ + VTFL  + ACS++  L   K VH ++ + 
Sbjct: 361 TMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISAS 420

Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLF 588
            V  D  + TA+  MYA C  L+ ++RVF+S+  R+ VSW+A+I  Y   G        F
Sbjct: 421 KVGLDTVLGTAIVSMYANCDSLEDSRRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLESF 480

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSR 647
           + M+  G+KP+  TF+ +L ACSH+GSVE+    FN++ R   + P +QHY C++DLL R
Sbjct: 481 RCMIHQGLKPDNDTFIFVLHACSHAGSVEQACDLFNSITRDHNLHPAIQHYVCVIDLLGR 540

Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGC 677
           +G +E A ++I+ MP+  N   W  LL  C
Sbjct: 541 AGWLENAHELINRMPYQPNSLAWSTLLGAC 570



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 224/470 (47%), Gaps = 17/470 (3%)

Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
           R+ H  + R  I  D  LGN  + MY KCG +  A   F +I+ R   SWT ++     +
Sbjct: 1   RAAHRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTEN 60

Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
           G  +  LE F +ML     P+ +  + VL +C+ L +L EG+ V   ++     P    L
Sbjct: 61  GLSELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFP--SSL 118

Query: 336 GPA----LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR-KGMSKEALELLVQM 390
            PA    L+  YA CG +    +V  +  E++++ WN +++ YA+ +   ++ LE   +M
Sbjct: 119 DPAVLTSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKM 178

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK----DEFVQSSLIDMYSKC 446
              G+  +  S    + AC      + G  +H    +I C     D F+ ++L++MYSKC
Sbjct: 179 LLEGVAANVVSFTCVVGACSRPELSEQGTVVHE---QITCSGLVADSFLAAALVNMYSKC 235

Query: 447 GFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
           G    A+ LF+R+  K S+V WNS++    Q  +  + + +F  + L  L+   VT ++ 
Sbjct: 236 GRLGSAWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISV 295

Query: 506 IQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
           + AC +   L   + ++ ++   G +  D+++ TAL   +  CG L  A+ +F  ++  N
Sbjct: 296 LGACCSTQALRIVEHIYERVAQVGELSHDLFLGTALMTSFCDCGKLADAESLFYRLNRWN 355

Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
             SW+ MI  Y  HG    A  L  +M   GIKPN VTF+ I+ ACS    +   K    
Sbjct: 356 AASWNTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHE 415

Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
            +    V  D      +V + +    +E + ++  S+      S W A++
Sbjct: 416 RISASKVGLDTVLGTAIVSMYANCDSLEDSRRVFESLDLRDTVS-WNAVI 464



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 245/483 (50%), Gaps = 13/483 (2%)

Query: 1   MPLFRSCTNLRKLT--RLHAHLLVTGLHY----DPPASTRLIESYAEMGSLRSSRLVFDT 54
           + + ++C+ LR L   R   +LLV+G  +    DP   T L+  YA  GSL ++R VF++
Sbjct: 86  LGVLKACSELRYLEEGREVENLLVSGSCFPSSLDPAVLTSLLNLYASCGSLENARRVFES 145

Query: 55  FKEPDSFMWAVLIKCYMWN-NFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS 113
           F E D   W  ++  Y  +     +++  + KM+ E    +   +  V+ ACS       
Sbjct: 146 FHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVVSFTCVVGACSRPELSEQ 205

Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYF 172
           G  VH +I   G   D  +  +++  Y + G L  A ++F ++  +  +VSW+SI+A++ 
Sbjct: 206 GTVVHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWELFQRVDVKMSLVSWNSILAAHA 265

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR-RKIKIDG 231
             AD+++ L++F  +  EG++P  VT++S+  AC    +LR    I+  V +  ++  D 
Sbjct: 266 QRADLTKVLEIFGMLQLEGLKPSGVTLISVLGACCSTQALRIVEHIYERVAQVGELSHDL 325

Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
            LG + +  +  CG L  AE  F ++ +    SW  MI+ Y + G+  +AL    +M   
Sbjct: 326 FLGTALMTSFCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQHGFDLQALHLLYEMDLE 385

Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
             +PN++T + ++ +C+ L  L   K+VH +I    +G +   LG A++  YA C  + +
Sbjct: 386 GIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGLD-TVLGTAIVSMYANCDSLED 444

Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
             +V  ++  R+ +SWN +I+ YA +G + + LE    M   GL PD+ +    L AC +
Sbjct: 445 SRRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQGLKPDNDTFIFVLHACSH 504

Query: 412 VGSLQLGLQIHGHVIKIDCKDEFVQS--SLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWN 468
            GS++    +   + +       +Q    +ID+  + G+   A+ L  R+  Q + + W+
Sbjct: 505 AGSVEQACDLFNSITRDHNLHPAIQHYVCVIDLLGRAGWLENAHELINRMPYQPNSLAWS 564

Query: 469 SMI 471
           +++
Sbjct: 565 TLL 567


>gi|302809930|ref|XP_002986657.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
 gi|300145545|gb|EFJ12220.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
          Length = 662

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 189/656 (28%), Positives = 341/656 (51%), Gaps = 22/656 (3%)

Query: 70  YMWNNFFE-ESILLYHKMIREQATISNFIYPSVLRACSSLG-DLGSGEKVHGRIIKCGFD 127
           +++  FF  +S+    K++  ++ ++N     ++R CSS   DL +   +H RI+  G D
Sbjct: 11  FLFKAFFSSDSLPSPPKVLPPRSLLAN-----LMRECSSTTRDLATARMIHSRIVSSGLD 65

Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
           +D  +   ++  Y + G L DAR+V D M +R  ++W++II++Y  + D  + + +FH +
Sbjct: 66  RDHHLGNQLVQMYLKCGSLADARRVLDAMPARGKLAWTAIISAYVHSGDFHQAIYLFHCL 125

Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
           + EGV PD V+ +++  A     S   A  +HG ++   ++ +  + N+ + MYSK  DL
Sbjct: 126 LLEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESGLEQELIVANALMSMYSKRLDL 185

Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
            S  + F ++ +R   SWT MI+ Y R G   +A+  F  M      PN IT  + L   
Sbjct: 186 RSCWKVFERMPERNVVSWTVMIASYARLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLF 245

Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSW 367
           +G   LR  K +H QI+  G G     +  A +   A CG ++   +V H++ ER+ +SW
Sbjct: 246 SGSKDLRAAKLIHEQIVGSGFG-AVTVVANACVGMLARCGDLAAAARVFHSMAERDEISW 304

Query: 368 NMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
           N++I+  A +G +     L ++M   G  PD  +  S LS+     +L        + + 
Sbjct: 305 NVMINAAAEEGEAPRVASLFMEMMAEGRRPDRATFLSILSSMEK--NLVDPPVPPFYQLV 362

Query: 428 IDCKDEF-------VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           ++C  E        V ++L+  Y KCG    A  +F  I    V+   ++I  F Q    
Sbjct: 363 LNCIAESGYQSSLQVTNALVSFYGKCGDVEGARRVFRSISSPDVISCTALIAAFSQRAQF 422

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            +A+ +F ++  + +  ++VTFL  + +C +   L  G W+H ++++ G + ++ +  AL
Sbjct: 423 QDALVVFRRLLHSGVRANQVTFLELLSSCRS---LSDGLWIHSQIVASGFQSEVDVAAAL 479

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM-LDSGIKPN 599
            +MY+ CG+L+ A+R +++++ +N+V  +  I     +G    A  LF +M  D G KP+
Sbjct: 480 VEMYSGCGNLKQAKRAYNAVAVKNLVLCNVYIAANAQNGNSERALKLFWEMQQDGGFKPD 539

Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
            +T   +L AC+H G V +G  YF  M+  + +  + QHY+C++DLL R+G ++ A K+ 
Sbjct: 540 GITLNAVLSACAHGGLVSQGCQYFAGMKCDYQLTCNSQHYSCLIDLLGRAGRLDIAEKVT 599

Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
            SMPFP + S+  A L  CR H   +      + +      D+  Y  LS+++A++
Sbjct: 600 TSMPFPPDQSVRMAFLGACRTHHDKERGSEAARRVLQLDPFDHSAYVALSHLHADQ 655



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 272/586 (46%), Gaps = 49/586 (8%)

Query: 3   LFRSCT----NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
           L R C+    +L     +H+ ++ +GL  D     +L++ Y + GSL  +R V D     
Sbjct: 38  LMRECSSTTRDLATARMIHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADARRVLDAMPAR 97

Query: 59  DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK-- 116
               W  +I  Y+ +  F ++I L+H ++ E       + P  +   + LG L   E   
Sbjct: 98  GKLAWTAIISAYVHSGDFHQAIYLFHCLLLEG------VIPDAVSFVAMLGALALDESQE 151

Query: 117 ----VHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
               VHG I++ G +++ ++  +++  Y +   L    KVF++M  R+VVSW+ +IASY 
Sbjct: 152 LATCVHGWIVESGLEQELIVANALMSMYSKRLDLRSCWKVFERMPERNVVSWTVMIASYA 211

Query: 173 DNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGP 232
              +++E +++F SM  EGV P+ +T  S          LR A+ IH  ++         
Sbjct: 212 RLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLFSGSKDLRAAKLIHEQIVGSGFGAVTV 271

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
           + N+ + M ++CGDL +A R F  + +R   SW  MI+     G   +    F++M+   
Sbjct: 272 VANACVGMLARCGDLAAAARVFHSMAERDEISWNVMINAAAEEGEAPRVASLFMEMMAEG 331

Query: 293 EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY---------------LGP 337
             P+  T +++L             S+   ++   + P Y                 +  
Sbjct: 332 RRPDRATFLSIL------------SSMEKNLVDPPVPPFYQLVLNCIAESGYQSSLQVTN 379

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
           AL+ FY +CG +    +V  +I   +++S   LI+ ++++   ++AL +  ++   G+  
Sbjct: 380 ALVSFYGKCGDVEGARRVFRSISSPDVISCTALIAAFSQRAQFQDALVVFRRLLHSGVRA 439

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLF 456
           +  +    LS+C    SL  GL IH  ++    + E  V ++L++MYS CG    A   +
Sbjct: 440 NQVTFLELLSSC---RSLSDGLWIHSQIVASGFQSEVDVAAALVEMYSGCGNLKQAKRAY 496

Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQL 515
             +  K++V+ N  I    QNGNS  A+ LF +M  +   + D +T    + AC++ G +
Sbjct: 497 NAVAVKNLVLCNVYIAANAQNGNSERALKLFWEMQQDGGFKPDGITLNAVLSACAHGGLV 556

Query: 516 EKG-KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
            +G ++       Y +  +    + L D+  + G L  A++V  SM
Sbjct: 557 SQGCQYFAGMKCDYQLTCNSQHYSCLIDLLGRAGRLDIAEKVTTSM 602


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 181/549 (32%), Positives = 282/549 (51%), Gaps = 9/549 (1%)

Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
           +  L  A     SLR    +HG + +     D  LGN+ I MY KCG+L  A   F  + 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 259 KRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGWLREGK 317
            R   SWTA++  + R G     L    +M    E  PN  TL   L +C  +G    G 
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYAR 376
            +H   +R G   E+D +  +L+  Y++ G++ +  +V    G    I +WN ++S YA 
Sbjct: 127 GIHGLCVRAGY-QEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH 185

Query: 377 KGMSKEALELLVQMQT--WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID---CK 431
            G  ++AL +  +M+       PD F+ AS L AC  +G+ + G Q+H  +         
Sbjct: 186 AGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS 245

Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
           +  +  +L+DMY KC    +A  +FER+++K+V+ W +++ G  Q G   EA+ LF + +
Sbjct: 246 NAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFW 305

Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
            +    D     + +   ++   +E+G+ VH   I      D+    ++ DMY KCG   
Sbjct: 306 RSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPD 365

Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
            A+R+F  M   NVVSW+ M++  G HG   +A +LF++M   G++P+EVT++ +L ACS
Sbjct: 366 EAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACS 425

Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
           H+G V+E + YF+ +R    V P  +HYACMVDLL R+G++  A  +I +MP      +W
Sbjct: 426 HAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVW 485

Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
             LL+ CR+HK + V +     L     ++   Y  LSN+ AE G W E  KVR  M   
Sbjct: 486 QTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRR 545

Query: 731 GLKKVPGYS 739
           GLKK  G S
Sbjct: 546 GLKKQGGCS 554



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 271/553 (49%), Gaps = 27/553 (4%)

Query: 97  IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
           +   +LRA +    L  G ++HG I K GF  D ++  +++  Y + G LD A +VF  M
Sbjct: 6   MIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGM 65

Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE--PDFVTMLSLAEACGELCSLRP 214
             R+VVSW++++  +  + D +  L++   M R   E  P+  T+ +  +AC  +     
Sbjct: 66  RDRNVVSWTALMVGFLRHGDATGCLRLLGEM-RTASEAAPNEYTLSASLKACCVVGDTAA 124

Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE-KRCTTSWTAMISCYN 273
              IHG  +R   +    + +S +++YSK G +  A R F          +W AM+S Y 
Sbjct: 125 GVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYA 184

Query: 274 RSGWFQKALESFVKML--EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            +G  + AL  F +M   E + +P+  T  ++L +C+GLG  REG  VH  +   G    
Sbjct: 185 HAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTA 244

Query: 332 YD-YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
            +  L  AL++ Y +C ++    +V   +  +N++ W  ++  +A++G   EALEL  + 
Sbjct: 245 SNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRF 304

Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFK 449
              G  PDS  ++S +    +   ++ G Q+H + IK     D    +S++DMY KCG  
Sbjct: 305 WRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLP 364

Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
           + A  +F  ++  +VV W +M+ G  ++G   EA+ LF +M    +E DEVT+L  + AC
Sbjct: 365 DEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSAC 424

Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYID------TALTDMYAKCGDLQTAQRVFDSMS-E 562
           S+ G +++ +    +  S  +R+D  +         + D+  + G+L+ A+ +  +M  E
Sbjct: 425 SHAGLVDECR----RYFSC-IRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPME 479

Query: 563 RNVVSWSAMIDCYGMHGQL---NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
             V  W  ++    +H  +    +A  +   M D     N VT  N+L   + +G   E 
Sbjct: 480 PTVGVWQTLLSACRVHKDVAVGREAGDVLLAM-DGDNPVNYVTLSNVL---AEAGEWREC 535

Query: 620 KFYFNAMRIFGVE 632
               +AMR  G++
Sbjct: 536 HKVRDAMRRRGLK 548



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 200/412 (48%), Gaps = 7/412 (1%)

Query: 8   TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
           ++LR   +LH  +   G   D      LI+ Y + G L  +  VF   ++ +   W  L+
Sbjct: 18  SSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALM 77

Query: 68  KCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
             ++ +      + L  +M    +A  + +   + L+AC  +GD  +G  +HG  ++ G+
Sbjct: 78  VGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGY 137

Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKMFH 185
            + DV+ +S++  Y + G + DAR+VFD       + +W+++++ Y       + L +F 
Sbjct: 138 QEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFR 197

Query: 186 SMVR-EGV-EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI--DGPLGNSFIVMY 241
            M R EG  +PD  T  SL +AC  L + R    +H  +         +  L  + + MY
Sbjct: 198 EMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMY 257

Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
            KC  L  A + F ++E++    WTA++  + + G   +ALE F +       P+   L 
Sbjct: 258 VKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLS 317

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +V+G  A    + +G+ VHC  I+   G +    G ++++ Y +CG   E E++   +  
Sbjct: 318 SVVGVLADFALVEQGRQVHCYGIKDPTGTDVS-AGNSIVDMYLKCGLPDEAERMFREMRA 376

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
            N++SW  +++   + G+ +EA+ L  +M+  G+ PD  +  + LSAC + G
Sbjct: 377 PNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAG 428



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 178/385 (46%), Gaps = 11/385 (2%)

Query: 16  LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF-MWAVLIKCYMWNN 74
           +H   +  G       ++ L+  Y++ G +  +R VFD          W  ++  Y    
Sbjct: 128 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 187

Query: 75  FFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD--KDD 130
              +++L++ +M R   Q     F + S+L+ACS LG    G +VH  +   GF    + 
Sbjct: 188 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 247

Query: 131 VIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE 190
           ++  +++  Y +   L  A +VF+++  ++V+ W++++  +     V+E L++F    R 
Sbjct: 248 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 307

Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
           G  PD   + S+     +   +   R +H + ++     D   GNS + MY KCG    A
Sbjct: 308 GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEA 367

Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGL 310
           ER F ++      SWT M++   + G  ++A+  F +M     EP+ +T + +L +C+  
Sbjct: 368 ERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHA 427

Query: 311 GWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWN 368
           G + E +     I R + + P+ ++    +++     G++ E   +I  +  E  +  W 
Sbjct: 428 GLVDECRRYFSCIRRDRTVRPKAEHY-ACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 486

Query: 369 MLISE---YARKGMSKEALELLVQM 390
            L+S    +    + +EA ++L+ M
Sbjct: 487 TLLSACRVHKDVAVGREAGDVLLAM 511


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 176/546 (32%), Positives = 301/546 (55%), Gaps = 11/546 (2%)

Query: 201 SLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKR 260
           SL   C ++ +     S+H   L+  +  D  + N  I +YSKCG+++ A R F ++  R
Sbjct: 8   SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67

Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVH 320
              SW+A+IS Y+++G    AL  F +M  V   PN     +V+ +CA L  L +G  VH
Sbjct: 68  NLVSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQGLQVH 124

Query: 321 CQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMS 380
            Q ++ G      ++  ALI  Y +CG  ++   V + + E N +S+N LI+ +      
Sbjct: 125 AQSLKLGC-VSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQP 183

Query: 381 KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSL 439
           ++ +E    M+  G  PD F+ +  L  C +      G+Q+H  +IK++ +D  F+ + +
Sbjct: 184 EKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVI 243

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMI--CGFYQNGNSLEAINLFHQMYLNC-LE 496
           I MYSK      A  +F  I++K ++ WN+++  C F ++     A+ +F  M   C ++
Sbjct: 244 ITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHE--RALRVFRDMLDVCFVK 301

Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
            D+ TF   + AC+ +  +  GK +H  LI     +D+ +  AL +MYAKCG ++ +  V
Sbjct: 302 PDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDV 361

Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV 616
           F   S+RN+VSW+ +I  +G HG    A   F++M   GI P+ VTF+ +L AC+H+G V
Sbjct: 362 FRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLV 421

Query: 617 EEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
           EEG+ YFN+M   +G+ P+++H++C++DLL R+G ++ A + +  +PF  +  I G+LL+
Sbjct: 422 EEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLS 481

Query: 676 GCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKV 735
            CR+H  + + + +  +L          Y LLSN+YA +  W    +   +++ +GLKK 
Sbjct: 482 ACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKE 541

Query: 736 PGYSTI 741
           PG+S I
Sbjct: 542 PGHSLI 547



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 244/497 (49%), Gaps = 8/497 (1%)

Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
           S+L  C+ +     G  +H   +K G   D ++   ++  Y + G +  AR++FD+M+ R
Sbjct: 8   SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67

Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
           ++VSWS+II+ Y         L +F  M    + P+     S+  AC  L +L     +H
Sbjct: 68  NLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQVH 124

Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
              L+        + N+ I MY KCG    A      + +    S+ A+I+ +  +   +
Sbjct: 125 AQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPE 184

Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
           K +E+F  M +    P+  T   +LG C        G  +HCQ+I+  +  +  ++G  +
Sbjct: 185 KGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNL-EDSAFIGNVI 243

Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM-QTWGLMPD 398
           I  Y++   + E EKV   I E++++SWN L++        + AL +   M     + PD
Sbjct: 244 ITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPD 303

Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
            F+ A  L+AC  + S++ G QIHGH+I+    +D  V ++L++MY+KCG    +Y +F 
Sbjct: 304 DFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFR 363

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
           R   +++V WN++I  F  +G    A+  F +M    +  D VTF+  + AC++ G +E+
Sbjct: 364 RTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEE 423

Query: 518 GKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCY 575
           G+   + +  +YG+  +I   + L D+  + G LQ A+   + +    + +   +++   
Sbjct: 424 GQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSAC 483

Query: 576 GMHGQLNDAASLFKQML 592
            +HG +     L  Q+L
Sbjct: 484 RLHGDMVIGEHLATQLL 500



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 211/424 (49%), Gaps = 16/424 (3%)

Query: 3   LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
           L   C  ++       LHA  L TG+  D   S  +I  Y++ G++  +R +FD   + +
Sbjct: 9   LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68

Query: 60  SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
              W+ +I  Y        ++ L+ +M   +   + +++ SV+ AC+SL  L  G +VH 
Sbjct: 69  LVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQVHA 125

Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
           + +K G      +  +++  Y + G   DA  V + M+  + VS++++IA + +N    +
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185

Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
           G++ F  M ++G  PD  T   L   C           +H  +++  ++    +GN  I 
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245

Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMIS--CYNRSGWFQKALESFVKMLEV-KEEPN 296
           MYSK   +  AE+ F  I+++   SW  +++  C+ +    ++AL  F  ML+V   +P+
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKD--HERALRVFRDMLDVCFVKPD 303

Query: 297 LITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG--PALIEFYAECGKMSECEK 354
             T   VL +CAGL  +R GK +H  +IR     +Y  +G   AL+  YA+CG +     
Sbjct: 304 DFTFAGVLAACAGLASIRHGKQIHGHLIRT---RQYQDVGVSNALVNMYAKCGSIKNSYD 360

Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
           V     +RN++SWN +I+ +   G+   ALE   +M+T G+ PDS +    L+AC + G 
Sbjct: 361 VFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGL 420

Query: 415 LQLG 418
           ++ G
Sbjct: 421 VEEG 424



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 170/352 (48%), Gaps = 5/352 (1%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
           S T L +  ++HA  L  G       S  LI  Y + G    + LV +   EP++  +  
Sbjct: 113 SLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNA 172

Query: 66  LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
           LI  ++ N   E+ I  +  M ++      F +  +L  C+S  D   G ++H ++IK  
Sbjct: 173 LIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLN 232

Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
            +    I   I+  Y +F  +++A KVF  +  +D++SW++++ +     D    L++F 
Sbjct: 233 LEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFR 292

Query: 186 SMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
            M+    V+PD  T   +  AC  L S+R  + IHGH++R +   D  + N+ + MY+KC
Sbjct: 293 DMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKC 352

Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
           G + ++   F +   R   SW  +I+ +   G   +ALE F KM  V   P+ +T + +L
Sbjct: 353 GSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLL 412

Query: 305 GSCAGLGWLREGKSVHCQIIRKGMG--PEYDYLGPALIEFYAECGKMSECEK 354
            +C   G + EG+ V+   + +  G  P  ++    LI+     G++ E E+
Sbjct: 413 TACNHAGLVEEGQ-VYFNSMEEAYGIFPNIEHFS-CLIDLLGRAGRLQEAEE 462


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 163/444 (36%), Positives = 256/444 (57%), Gaps = 5/444 (1%)

Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
           +VL  C     +REG+ VH  +I+    P   YL   LI  Y +C  + +  +V+  + E
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPV-YLRTRLIVLYNKCRCLGDARRVLDEMPE 540

Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
           RN++SW  +IS Y+++G + EAL L V+M   G  P+ F+ A+ L++C +    QLG QI
Sbjct: 541 RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 600

Query: 422 HGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
           H  VIK   +   FV SSL+DMY+K G    A  +F+ + ++ VV   ++I G+ Q G  
Sbjct: 601 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 660

Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
            EA++LF ++    +  + VT+ + + A S +  L+ G+ VH  ++   +   + +  +L
Sbjct: 661 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 720

Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPN 599
            DMY+KCG L  ++R+FDSM ER V+SW+AM+  Y  HG   +A  LFK M +   +KP+
Sbjct: 721 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780

Query: 600 EVTFMNILWACSHSGSVEEGK--FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKM 657
            VTF+ +L  CSH G  + G   FY    +  G EP+++HY C+VDL  R+G +E AF+ 
Sbjct: 781 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 840

Query: 658 IHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNW 717
           I  MPF    +IWG+LL  CR+H+ + + + + + L    + + G Y +LSN+YA  G W
Sbjct: 841 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 900

Query: 718 DEFGKVRSIMEVTGLKKVPGYSTI 741
           D+   VR +M+   + K PG S I
Sbjct: 901 DDVRTVRELMKEKAVIKEPGRSWI 924



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 240/463 (51%), Gaps = 38/463 (8%)

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
           +G+E +F    S+   C    ++R  + +H H+++   +    L    IV+Y+KC  L  
Sbjct: 471 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 530

Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
           A R   ++ +R   SWTAMIS Y++ G+  +AL  FV+ML     PN  T  TVL SC  
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 590

Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
               + G+ +H  +I+      + ++G +L++ YA+ GK+ E  +V   + ER+++S   
Sbjct: 591 SSGFQLGRQIHSLVIKTSF-ESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 649

Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
           +IS YA+ G+ +EAL+L  ++Q  G+  +  + AS L+A   + +L  G Q+H HV++  
Sbjct: 650 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAK 709

Query: 430 CKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
                V Q+SLIDMYSKCG    +  +F+ + +++V+ WN+M+ G+ ++G   EA+ LF 
Sbjct: 710 LPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFK 769

Query: 489 QMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
            M   N ++ D VTFL  +  CS+ G  ++G  + +++++   +KD +            
Sbjct: 770 LMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN---QKDGF------------ 814

Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
                         E  +  +  ++D +G  G++ +A    K+M     +P    + ++L
Sbjct: 815 --------------EPEIEHYGCVVDLFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLL 857

Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDLLSRSG 649
            AC    +V  G+F   A R+  +E +   +Y  + +L + +G
Sbjct: 858 GACRVHQNVHIGEFV--ARRLLEIESENAGNYVILSNLYASAG 898



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 206/389 (52%), Gaps = 12/389 (3%)

Query: 98  YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
           Y SVL  C S   +  G++VH  +IK  ++    ++T ++  Y +  CL DAR+V D+M 
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539

Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
            R+VVSW+++I+ Y      SE L +F  M+  G  P+  T  ++  +C      +  R 
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599

Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
           IH  V++   +    +G+S + MY+K G +  A R F  + +R   S TA+IS Y + G 
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659

Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
            ++AL+ F ++       N +T  +VL + +GL  L  G+ VH  ++R  + P Y  L  
Sbjct: 660 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL-PFYVVLQN 718

Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG-LM 396
           +LI+ Y++CG ++   ++  ++ ER ++SWN ++  Y++ G+ +EA+EL   M+    + 
Sbjct: 719 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 778

Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQS-----SLIDMYSKCGFKNL 451
           PDS +  + LS C + G    GL+I   +  ++ KD F         ++D++ + G    
Sbjct: 779 PDSVTFLAVLSGCSHGGMEDRGLEIFYEM--VNQKDGFEPEIEHYGCVVDLFGRAGRVEE 836

Query: 452 AYLLFERIQ-QKSVVMWNSMI--CGFYQN 477
           A+   +++  + +  +W S++  C  +QN
Sbjct: 837 AFEFIKKMPFEPTAAIWGSLLGACRVHQN 865



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 186/356 (52%), Gaps = 8/356 (2%)

Query: 6   SCTNLRKLTRLHAHLLVTGLHYDPPA--STRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
           S T +R+  R+HAH++ T   Y+PP    TRLI  Y +   L  +R V D   E +   W
Sbjct: 489 SQTAIREGQRVHAHMIKTC--YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 546

Query: 64  AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
             +I  Y    +  E++ L+ +M+      + F + +VL +C+S      G ++H  +IK
Sbjct: 547 TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 606

Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
             F+    + +S+L  Y + G + +AR+VFD +  RDVVS ++II+ Y       E L +
Sbjct: 607 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 666

Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
           F  + REG+  ++VT  S+  A   L +L   R +H HVLR K+     L NS I MYSK
Sbjct: 667 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 726

Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEPNLITLIT 302
           CG L  + R F  + +R   SW AM+  Y++ G  ++A+E F  M E  K +P+ +T + 
Sbjct: 727 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 786

Query: 303 VLGSCAGLGWLREGKSVHCQII--RKGMGPEYDYLGPALIEFYAECGKMSECEKVI 356
           VL  C+  G    G  +  +++  + G  PE ++ G  +++ +   G++ E  + I
Sbjct: 787 VLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG-CVVDLFGRAGRVEEAFEFI 841



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 177/326 (54%), Gaps = 16/326 (4%)

Query: 380 SKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQS 437
           +++  E L++M   GL  +     S L+ C +  +++ G ++H H+IK  C +   ++++
Sbjct: 458 NRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRT 516

Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEM 497
            LI +Y+KC     A  + + + +++VV W +MI G+ Q G + EA++LF +M ++    
Sbjct: 517 RLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP 576

Query: 498 DEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF 557
           +E TF T + +C++    + G+ +H  +I       I++ ++L DMYAK G +  A+RVF
Sbjct: 577 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 636

Query: 558 DSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
           D + ER+VVS +A+I  Y   G   +A  LF+++   G++ N VT+ ++L A S   +++
Sbjct: 637 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 696

Query: 618 EGKFYFNAMRIFGVEPDLQHYAC----MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
            G+   + +    +   L  Y      ++D+ S+ G +  + ++  SMP     S W A+
Sbjct: 697 HGRQVHSHV----LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS-WNAM 751

Query: 674 LNGCRIH----KRIDVMKTIEKELSV 695
           L G   H    + +++ K +++E  V
Sbjct: 752 LVGYSKHGLGREAVELFKLMKEENKV 777


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 214/745 (28%), Positives = 358/745 (48%), Gaps = 91/745 (12%)

Query: 33  TRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQAT 92
           T L+  YA  G +R +R VFD     ++  W  ++ CY+ N     +  L+  M      
Sbjct: 99  TILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAM------ 152

Query: 93  ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
                 PS                           +D     ++L  Y     +++AR +
Sbjct: 153 ------PS---------------------------RDVSSWNTMLTGYCHSQLMEEARNL 179

Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
           F++M  R+ VSW+ +I+ Y           MF +M+ EG+ P+   ++S+  A   L   
Sbjct: 180 FERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKP 239

Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISC 271
               SIH  V +   + D  +G + +  Y+K  ++L SA + F  +  R   +W+ +I+ 
Sbjct: 240 GILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAA 299

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
            +++G    A   + +   +K  P+  +++T        G  R G+    +I+   +   
Sbjct: 300 LSQAGRIDDAFAVYQRD-PLKSVPSRTSMLT--------GLARYGRIDDAKILFDQIHEP 350

Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
                 A+I  Y +   + E E + + +  RN +SW  +I+ YAR G S++AL  L  + 
Sbjct: 351 NVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALH 410

Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKN 450
             G++P   S+ SS  AC N+ +L+ G Q+H   +K  C+ + +V ++LI +Y K     
Sbjct: 411 RKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIG 470

Query: 451 LAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACS 510
               +F+R+  K  V +NS +    QN    EA ++F+ M       D V++ T I AC+
Sbjct: 471 SVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWTTIISACA 526

Query: 511 -----------------------------------NIGQLEKGKWVHHKLISYGVRKDIY 535
                                              N+G  + G+ +H   I  G+   + 
Sbjct: 527 QADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLV 586

Query: 536 IDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
           +  AL  MY KC    +  +VFDSM ER++ +W+ +I  Y  HG   +A  +++ M+ +G
Sbjct: 587 VANALVSMYFKCSSADSL-KVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAG 645

Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGA 654
           + PNEVTF+ +L ACSHSG V+EG  +F +M   +G+ P L+HYACMVDLL R+GD++GA
Sbjct: 646 VLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGA 705

Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
              I+ MP   +  IW ALL  C+IHK +++ +   ++L     ++ G Y +LSNIY+ +
Sbjct: 706 EHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQ 765

Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYS 739
           G WDE  KVR +M+  G+ K PG S
Sbjct: 766 GMWDEVAKVRKLMKERGVNKDPGCS 790



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 123/557 (22%), Positives = 242/557 (43%), Gaps = 67/557 (12%)

Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
           Q++ +   G  G L +AR+VFD M  RD+++W+S+I +Y +N     G  +  ++    +
Sbjct: 36  QSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNL 95

Query: 193 EPDFVTMLSLAEACGELCSLRPARSI-HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
               + +   A A      +R AR +  G  +R  +       N+ +  Y + GD+  A 
Sbjct: 96  RTGTILLSGYARA----GRVRDARRVFDGMGVRNTVAW-----NAMVTCYVQNGDITLAR 146

Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE--------------------- 290
           + F  +  R  +SW  M++ Y  S   ++A   F +M E                     
Sbjct: 147 KLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGR 206

Query: 291 -------------VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD-YLG 336
                          E+PNL+++++ +      G L   +S+H  + + G   E D  +G
Sbjct: 207 AWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGIL---ESIHVLVHKTGF--ERDVVVG 261

Query: 337 PALIEFYA-ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
            A++  Y  +   +    K    +  RN  +W+ +I+  ++ G   +A  +  Q      
Sbjct: 262 TAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY-QRDPLKS 320

Query: 396 MPDSFSVASSLSACGNVGSLQLGL-QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYL 454
           +P   S+ + L+  G +   ++   QIH   +          +++I  Y +    + A  
Sbjct: 321 VPSRTSMLTGLARYGRIDDAKILFDQIHEPNV-------VSWNAMITGYMQNEMVDEAED 373

Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
           LF R+  ++ + W  MI G+ +NG S +A+     ++   +     +  ++  ACSNI  
Sbjct: 374 LFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEA 433

Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
           LE GK VH   +  G + + Y+  AL  +Y K   + + +++FD M+ ++ VS+++ +  
Sbjct: 434 LETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSA 493

Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
              +   ++A  +F  M      P+ V++  I+ AC+ +    E    F +M     E +
Sbjct: 494 LVQNNLFDEARDVFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSML---HERE 546

Query: 635 LQHYACMVDLLSRSGDI 651
           L +   +  LL  SG++
Sbjct: 547 LPNPPILTILLGLSGNL 563



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 159/377 (42%), Gaps = 70/377 (18%)

Query: 30  PASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI-- 87
           P+ T ++   A  G +  ++++FD   EP+   W  +I  YM N   +E+  L+++M   
Sbjct: 322 PSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR 381

Query: 88  -----------------REQATIS------------NFIYPSVLRACSSLGDLGSGEKVH 118
                             EQA +S                 S   ACS++  L +G++VH
Sbjct: 382 NTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVH 441

Query: 119 GRIIKCG---------------------------FD----KDDVIQTSILCTYGEFGCLD 147
              +K G                           FD    KD V   S +    +    D
Sbjct: 442 SLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFD 501

Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
           +AR VF+ M S DVVSW++II++       +E +++F SM+ E   P+   +  L    G
Sbjct: 502 EARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSG 561

Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
            L + +  + IH   ++  +     + N+ + MY KC    S  + F  +E+R   +W  
Sbjct: 562 NLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSL-KVFDSMEERDIFTWNT 620

Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
           +I+ Y + G  ++A+  +  M+     PN +T + +L +C+  G + EG         K 
Sbjct: 621 IITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFF-----KS 675

Query: 328 MGPEYDYLGPALIEFYA 344
           M  +Y  L P L+E YA
Sbjct: 676 MSSDYG-LTP-LLEHYA 690


>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
 gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
 gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
 gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
 gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
          Length = 685

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/580 (32%), Positives = 297/580 (51%), Gaps = 72/580 (12%)

Query: 233 LGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF------- 285
           L N+ +  Y++ G L  A R F  +  R T S+ A++S   R G    AL  F       
Sbjct: 52  LLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPD 111

Query: 286 --------------------VKMLEVKEEPNLI----TLITVLGSCAGLGWLREGKSVHC 321
                               ++ L      + +    +  + L +CA     R G+ VH 
Sbjct: 112 QCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHA 171

Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
            + +   G +  Y+G AL++ YA+C +  E +KV  A+ ERNI+SWN LI+ Y + G   
Sbjct: 172 LVTKSSHGSDV-YIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVD 230

Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSL 439
           EAL L V+M   G +PD  ++AS +SAC  + + + G Q+H  ++K D   +D  + ++L
Sbjct: 231 EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNAL 290

Query: 440 IDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM--------- 490
           +DMY+KCG    A  +F+R+  +SVV   SMI G+ ++ N  +A  +F QM         
Sbjct: 291 VDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWN 350

Query: 491 -----YLNCLEMDEV-----------------TFLTAIQACSNIGQLEKGKWVHHKLISY 528
                Y +  E +E                  T+   + AC+N+  L+ G+  H  ++  
Sbjct: 351 VLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKE 410

Query: 529 GVR------KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
           G R       D+++  +L DMY K G +    +VF+ M+ R+ VSW+AMI  Y  +G+  
Sbjct: 411 GFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAK 470

Query: 583 DAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACM 641
           DA  LF++ML S  +P+ VT + +L AC HSG V+EG+ YF +M    G+ P   HY CM
Sbjct: 471 DALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCM 530

Query: 642 VDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDN 701
           +DLL R+G ++   ++I +MP   +  +W +LL  CR+HK ID+ +    +L     +++
Sbjct: 531 IDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNS 590

Query: 702 GYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
           G Y LLSN+YAE G W +  +VR  M+  G+ K PG S I
Sbjct: 591 GPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWI 630



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/614 (25%), Positives = 285/614 (46%), Gaps = 96/614 (15%)

Query: 96  FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD----KDDVIQTSILCTYGEFGCLDDARK 151
           F+  ++L A + LG L    +V        FD    ++     ++L      G  DDA  
Sbjct: 51  FLLNTLLSAYARLGSLHDARRV--------FDGMPHRNTFSYNALLSACARLGRADDALA 102

Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
           +F  +   D  S+++++A+   +    + L+   +M  +    +  +  S   AC    +
Sbjct: 103 LFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKA 162

Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
            R    +H  V +     D  +G + + MY+KC     A++ F  + +R   SW ++I+C
Sbjct: 163 SRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITC 222

Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
           Y ++G   +AL  FV+M++    P+ +TL +V+ +CAGL   REG+ VH ++++     E
Sbjct: 223 YEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFRE 282

Query: 332 YDYLGPALIEFYAECGK-------------------------------MSECEKVIHAIG 360
              L  AL++ YA+CG+                               + + + V   + 
Sbjct: 283 DMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMV 342

Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
           E+N+++WN+LI+ YA     +EAL L V+++   + P  ++  + L+AC N+ +LQLG Q
Sbjct: 343 EKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQ 402

Query: 421 IHGHVIKIDCK-------DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
            H HV+K   +       D FV +SL+DMY K G  +    +FER+  +  V WN+MI G
Sbjct: 403 AHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVG 462

Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
           + QNG + +A+ LF +M  +    D VT +  + AC + G +++G+              
Sbjct: 463 YAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGR-------------- 508

Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV-----SWSAMIDCYGMHGQLNDAASLF 588
                                R F SM+E + +      ++ MID  G  G L +   L 
Sbjct: 509 ---------------------RYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELI 547

Query: 589 KQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ-HYACMVDLLSR 647
           + M    ++P+ V + ++L AC    +++ G++   A ++F ++PD    Y  + ++ + 
Sbjct: 548 ENM---PMEPDAVLWASLLGACRLHKNIDMGEWA--AGKLFELDPDNSGPYVLLSNMYAE 602

Query: 648 SGDIEGAFKMIHSM 661
            G     F++  SM
Sbjct: 603 LGKWADVFRVRRSM 616



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 247/512 (48%), Gaps = 48/512 (9%)

Query: 12  KLTRLH-AHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
           +L  LH A  +  G+ H +  +   L+ + A +G    +  +F    +PD   +  ++  
Sbjct: 62  RLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAA 121

Query: 70  YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
              +    +++     M  +   ++ + + S L AC+S     +GE+VH  + K     D
Sbjct: 122 LAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSD 181

Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
             I T+++  Y +    ++A+KVFD M  R++VSW+S+I  Y  N  V E L +F  M++
Sbjct: 182 VYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMK 241

Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLL 248
           +G  PD VT+ S+  AC  L + R  R +H  +++  + + D  L N+ + MY+KCG   
Sbjct: 242 DGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTW 301

Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE------------------ 290
            A+  F ++  R   S T+MI+ Y +S     A   F++M+E                  
Sbjct: 302 EAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSE 361

Query: 291 ----------VKEE---PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM----GPEYD 333
                     +K E   P   T   VL +CA L  L+ G+  H  ++++G     GPE D
Sbjct: 362 EEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESD 421

Query: 334 -YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQT 392
            ++G +L++ Y + G +S+  KV   +  R+ +SWN +I  YA+ G +K+AL L  +M  
Sbjct: 422 VFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLC 481

Query: 393 WGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK----IDCKDEFVQSSLIDMYSKCG- 447
               PDS ++   LSACG+ G ++ G +    + +    I  +D +  + +ID+  + G 
Sbjct: 482 SNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHY--TCMIDLLGRAGH 539

Query: 448 FKNLAYLLFERIQQKSVVMWNSMI--CGFYQN 477
            K +  L+     +   V+W S++  C  ++N
Sbjct: 540 LKEVEELIENMPMEPDAVLWASLLGACRLHKN 571



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 123/223 (55%), Gaps = 3/223 (1%)

Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFE 457
           ++F + + LSA   +GSL    ++      +  ++ F  ++L+   ++ G  + A  LF 
Sbjct: 49  ETFLLNTLLSAYARLGSLHDARRVFD---GMPHRNTFSYNALLSACARLGRADDALALFG 105

Query: 458 RIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
            I       +N+++    Q+G   +A+     M+ +   ++  +F +A+ AC++      
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165

Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
           G+ VH  +       D+YI TAL DMYAKC   + AQ+VFD+M ERN+VSW+++I CY  
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225

Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
           +G +++A +LF +M+  G  P+EVT  +++ AC+   +  EG+
Sbjct: 226 NGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGR 268



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
           + ++   L   YA+ G L  A+RVFD M  RN  S++A++      G+ +DA +LF  + 
Sbjct: 49  ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108

Query: 593 DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
           D    P++ ++  ++ A +  G   +   +  AM
Sbjct: 109 D----PDQCSYNAVVAALAQHGRGGDALRFLAAM 138


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.137    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,449,214,351
Number of Sequences: 23463169
Number of extensions: 460946809
Number of successful extensions: 1240474
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9927
Number of HSP's successfully gapped in prelim test: 1698
Number of HSP's that attempted gapping in prelim test: 979279
Number of HSP's gapped (non-prelim): 79230
length of query: 741
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 591
effective length of database: 8,839,720,017
effective search space: 5224274530047
effective search space used: 5224274530047
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)