BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004632
(741 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/743 (58%), Positives = 560/743 (75%), Gaps = 3/743 (0%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
MPLFRSC++LR +++LHAHLLVTG L DP T+LIESYA MGS SSRLVF+ F PD
Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD 64
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLGSGEKVH 118
SFM+ VLIKC +W + + +I LYH+++ E IS F++PSVLRAC+ S L G KVH
Sbjct: 65 SFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVH 124
Query: 119 GRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVS 178
GRIIK G D D VI+TS+LC YG+ G L DA KVFD M RD+V+WS++++S +N +V
Sbjct: 125 GRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVV 184
Query: 179 EGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
+ L+MF MV +GVEPD VTM+S+ E C EL LR ARS+HG + R+ +D L NS +
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244
Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
MYSKCGDLLS+ER F KI K+ SWTAMIS YNR + +KAL SF +M++ EPNL+
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLV 304
Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
TL +VL SC +G +REGKSVH +R+ + P Y+ L AL+E YAECGK+S+CE V+
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
+ +RNI++WN LIS YA +GM +AL L QM T + PD+F++ASS+SAC N G + LG
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 419 LQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
QIHGHVI+ D DEFVQ+SLIDMYSK G + A +F +I+ +SVV WNSM+CGF QNG
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNG 484
Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
NS+EAI+LF MY + LEM+EVTFL IQACS+IG LEKGKWVHHKLI G+ KD++ DT
Sbjct: 485 NSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDT 543
Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
AL DMYAKCGDL A+ VF +MS R++VSWS+MI+ YGMHG++ A S F QM++SG KP
Sbjct: 544 ALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 603
Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMI 658
NEV FMN+L AC HSGSVEEGK+YFN M+ FGV P+ +H+AC +DLLSRSGD++ A++ I
Sbjct: 604 NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 659 HSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWD 718
MPF A+ S+WG+L+NGCRIH+++D++K I+ +LS T+D GYYTLLSNIYAEEG W+
Sbjct: 664 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWE 723
Query: 719 EFGKVRSIMEVTGLKKVPGYSTI 741
EF ++RS M+ + LKKVPGYS I
Sbjct: 724 EFRRLRSAMKSSNLKKVPGYSAI 746
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/747 (31%), Positives = 414/747 (55%), Gaps = 9/747 (1%)
Query: 3 LFRSCTN---LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
L ++C+N LR+ ++HA L+V + D R++ YA GS +F
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 60 SFM--WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
S + W +I ++ N +++ Y KM+ + +P +++AC +L + + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
+ G D ++ + +S++ Y E+G +D K+FD++ +D V W+ ++ Y +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
+K F M + + P+ VT + C + +HG V+ + +G + NS
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
+ MYSKCG A + F + + T +W MIS Y +SG +++L F +M+ P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
IT ++L S + L K +HC I+R + + +L ALI+ Y +C +S + +
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI-FLTSALIDAYFKCRGVSMAQNIFS 399
Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
+++ + +IS Y G+ ++LE+ + + P+ ++ S L G + +L+L
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 418 GLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
G ++HG +IK + + ++IDMY+KCG NLAY +FER+ ++ +V WNSMI Q
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
+ N AI++F QM ++ + D V+ A+ AC+N+ GK +H +I + + D+Y
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD-SG 595
++ L DMYAKCG+L+ A VF +M E+N+VSW+++I G HG+L D+ LF +M++ SG
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 596 IKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGA 654
I+P+++TF+ I+ +C H G V+EG +F +M +G++P +HYAC+VDL R+G + A
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 655 FKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEE 714
++ + SMPFP + +WG LL CR+HK +++ + +L +++GYY L+SN +A
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Query: 715 GNWDEFGKVRSIMEVTGLKKVPGYSTI 741
W+ KVRS+M+ ++K+PGYS I
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 179/354 (50%), Gaps = 14/354 (3%)
Query: 278 FQKALESFVKMLEVK------EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
F A+ + K L ++ EE L +L +C+ LR+GK VH +I + +
Sbjct: 10 FAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGD 69
Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGER--NILSWNMLISEYARKGMSKEALELLVQ 389
Y ++ YA CG S+C K+ + + R +I WN +IS + R G+ +AL +
Sbjct: 70 -SYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFK 128
Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---IDCKDEFVQSSLIDMYSKC 446
M +G+ PD + + AC + + + G+ + +DC +EFV SSLI Y +
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVSSLGMDC-NEFVASSLIKAYLEY 186
Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
G ++ LF+R+ QK V+WN M+ G+ + G I F M ++ + + VTF +
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
C++ ++ G +H ++ GV + I +L MY+KCG A ++F MS + V
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV 306
Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
+W+ MI Y G + ++ + F +M+ SG+ P+ +TF ++L + S ++E K
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 183/361 (50%), Gaps = 3/361 (0%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
+P NL ++H +++ + D ++ LI++Y + + ++ +F D
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
++ +I Y+ N + +S+ ++ +++ + + + S+L L L G ++HG
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
IIK GFD I +++ Y + G ++ A ++F++++ RD+VSW+S+I + + S
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
+ +F M G+ D V++ + AC L S ++IHG +++ + D ++ I M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLIT 299
Y+KCG+L +A F ++++ SW ++I+ G + +L F +M+E P+ IT
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
+ ++ SC +G + EG + G+ P+ ++ +++ + G+++E + + +
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA-CVVDLFGRAGRLTEAYETVKS 705
Query: 359 I 359
+
Sbjct: 706 M 706
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/733 (32%), Positives = 400/733 (54%), Gaps = 8/733 (1%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+H ++V GL D S LI Y+ G + +R VF+ E + W+ ++ +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 76 FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGE--KVHGRIIKCGFDKDDVI 132
+EES++++ + R + N +I S ++ACS L G ++ ++K GFD+D +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
T ++ Y + G +D AR VFD + + V+W+++I+ L++F+ ++ + V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
PD + ++ AC L L + IH H+LR +++D L N I Y KCG +++A +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
F + + SWT ++S Y ++ ++A+E F M + +P++ ++L SCA L
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
L G VH I+ +G + Y+ +LI+ YA+C +++ KV +++ +N +I
Sbjct: 366 LGFGTQVHAYTIKANLGND-SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 373 EYARKGMS---KEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
Y+R G EAL + M+ + P + S L A ++ SL L QIHG + K
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 430 CK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
D F S+LID+YS C + L+F+ ++ K +V+WNSM G+ Q + EA+NLF
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
++ L+ DE TF + A N+ ++ G+ H +L+ G+ + YI AL DMYAKCG
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
+ A + FDS + R+VV W+++I Y HG+ A + ++M+ GI+PN +TF+ +L
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
ACSH+G VE+G F M FG+EP+ +HY CMV LL R+G + A ++I MP
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI 724
Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
+W +LL+GC +++ + + ++ D+G +T+LSNIYA +G W E KVR M+
Sbjct: 725 VWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMK 784
Query: 729 VTGLKKVPGYSTI 741
V G+ K PG S I
Sbjct: 785 VEGVVKEPGRSWI 797
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 259/524 (49%), Gaps = 7/524 (1%)
Query: 15 RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
++HAH+L GL D LI+SY + G + ++ +F+ + W L+ Y N
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 75 FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
+E++ L+ M + + S+L +C+SL LG G +VH IK D +
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF---DNADVSEGLKMFHSMVREG 191
S++ Y + CL DARKVFD + DVV ++++I Y ++ E L +F M
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
+ P +T +SL A L SL ++ IHG + + + +D G++ I +YS C L +
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
F +++ + W +M + Y + ++AL F+++ +E P+ T ++ + L
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
++ G+ HCQ++++G+ Y+ AL++ YA+CG + K + R+++ WN +I
Sbjct: 570 SVQLGQEFHCQLLKRGLECN-PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
S YA G K+AL++L +M + G+ P+ + LSAC + G ++ GL+ +++ +
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 432 DEFVQ-SSLIDMYSKCGFKNLAYLLFERIQQK-SVVMWNSMICGFYQNGNSLEAINLFHQ 489
E ++ + + G N A L E++ K + ++W S++ G + GN +E +
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN-VELAEHAAE 747
Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
M + D +F ++ G + K V ++ GV K+
Sbjct: 748 MAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 215/471 (45%), Gaps = 45/471 (9%)
Query: 3 LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+ SC +L L T++HA+ + L D + LI+ YA+ L +R VFD F D
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 60 SFMWAVLIKCY-----MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
++ +I+ Y W E++ ++ M S + S+LRA +SL LG
Sbjct: 416 VVLFNAMIEGYSRLGTQWE--LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
+++HG + K G + D ++++ Y CL D+R VFD+M +D+V W+S+ A Y
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
++ E L +F + PD T ++ A G L S++ + H +L+R ++ + +
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
N+ + MY+KCG A + F R W ++IS Y G +KAL+ KM+ E
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
PN IT + VL +C+ G + +G ++R G+ PE ++
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH-------------------- 693
Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
+ ++S R G +A EL+ +M T P + S LS C G+
Sbjct: 694 ------------YVCMVSLLGRAGRLNKARELIEKMPT---KPAAIVWRSLLSGCAKAGN 738
Query: 415 LQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
++L I D KD + L ++Y+ G A + ER++ + VV
Sbjct: 739 VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 176/393 (44%), Gaps = 67/393 (17%)
Query: 6 SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
S T+L ++H + GL+ D A + LI+ Y+ L+ SRLVFD K D +W
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 66 LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
+ Y+ + EE++ L+ ++ + F + +++ A +L + G++ H +++K G
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
+ + I ++L Y + G +DA K FD SRDVV W+S+I+SY ++ + + L+M
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
M+ EG+EP+++T + + AC H ++ +K F +M
Sbjct: 646 KMMSEGIEPNYITFVGVLSACS-----------HAGLVEDGLK-------QFELML---- 683
Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
R ++ E T + M+S R+G KA E KM +P I ++L
Sbjct: 684 ------RFGIEPE---TEHYVCMVSLLGRAGRLNKARELIEKM---PTKPAAIVWRSLLS 731
Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
CA G L E AE +S+ ++
Sbjct: 732 GCAKAG------------------------NVELAEHAAEMAILSD---------PKDSG 758
Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
S+ ML + YA KGM EA ++ +M+ G++ +
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/739 (32%), Positives = 407/739 (55%), Gaps = 20/739 (2%)
Query: 19 HLLVTG---LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
H LV+G L D TR+I YA GS SR VFD + + F W +I Y N
Sbjct: 107 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166
Query: 76 FEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
++E + + +MI + + F YP V++AC+ + D+G G VHG ++K G +D +
Sbjct: 167 YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 226
Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE- 193
+++ YG G + DA ++FD M R++VSW+S+I + DN E + M+ E +
Sbjct: 227 ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
Query: 194 ---PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
PD T++++ C + + +HG ++ ++ + L N+ + MYSKCG + +A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 251 ERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE--PNLITLITVLGSCA 308
+ F + SW M+ ++ G + +ML E+ + +T++ + C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDY---LGPALIEFYAECGKMSECEKVIHAIGERNIL 365
+L K +HC +++ E+ Y + A + YA+CG +S ++V H I + +
Sbjct: 407 HESFLPSLKELHCYSLKQ----EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
SWN LI +A+ + +L+ +QM+ GL+PDSF+V S LSAC + SL+LG ++HG +
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 426 IKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAI 484
I+ +D FV S++ +Y CG LF+ ++ KS+V WN++I G+ QNG A+
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 485 NLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMY 544
+F QM L +++ ++ + ACS + L G+ H + + + D +I +L DMY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 545 AKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFM 604
AK G + + +VF+ + E++ SW+AMI YG+HG +A LF++M +G P+++TF+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 605 NILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMI-HSMP 662
+L AC+HSG + EG Y + M+ FG++P+L+HYAC++D+L R+G ++ A +++ M
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
A+ IW +LL+ CRIH+ +++ + + +L Y LLSN+YA G W++ K
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 723 VRSIMEVTGLKKVPGYSTI 741
VR M L+K G S I
Sbjct: 823 VRQRMNEMSLRKDAGCSWI 841
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/611 (27%), Positives = 313/611 (51%), Gaps = 24/611 (3%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+H ++ TGL D L+ Y G + + +FD E + W +I+ + N F
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 76 FEESILLYHKMIREQA------TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
EES LL +M+ E ++ + +VL C+ ++G G+ VHG +K DK+
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLV--TVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
V+ +++ Y + GC+ +A+ +F +++VVSW++++ + D + M+
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 190 --EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
E V+ D VT+L+ C L + +H + L+++ + + N+F+ Y+KCG L
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
A+R F I + SW A+I + +S + +L++ ++M P+ T+ ++L +C
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 308 AGLGWLREGKSVHCQIIRKGMGPE-YDYLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
+ L LR GK VH IIR + + + YL +++ Y CG++ + + A+ +++++S
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
WN +I+ Y + G AL + QM +G+ S+ AC + SL+LG + H + +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 427 KIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAIN 485
K +D+ F+ SLIDMY+K G + +F +++KS WN+MI G+ +G + EAI
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYIDTALTDMY 544
LF +M D++TFL + AC++ G + +G +++ S+G++ ++ + DM
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 545 AKCGDLQTAQRVF-DSMSER-NVVSWSAMIDCYGMHGQL----NDAASLFKQMLDSGIKP 598
+ G L A RV + MSE +V W +++ +H L AA LF+ + KP
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE---KP 801
Query: 599 NEVTFMNILWA 609
++ L+A
Sbjct: 802 ENYVLLSNLYA 812
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 4/366 (1%)
Query: 10 LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
L L LH + L Y+ + + SYA+ GSL ++ VF + W LI
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 70 YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
+ +N S+ + +M +F S+L ACS L L G++VHG II+ ++D
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
+ S+L Y G L + +FD M + +VSW+++I Y N L +F MV
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
G++ ++M+ + AC L SLR R H + L+ ++ D + S I MY+K G +
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 650
Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
+ + F ++++ T SW AMI Y G ++A++ F +M P+ +T + VL +C
Sbjct: 651 SSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 710
Query: 310 LGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVI--HAIGERNILS 366
G + EG Q+ G+ P + +I+ G++ + +V+ E ++
Sbjct: 711 SGLIHEGLRYLDQMKSSFGLKPNLKHYA-CVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 367 WNMLIS 372
W L+S
Sbjct: 770 WKSLLS 775
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 201/501 (40%), Gaps = 65/501 (12%)
Query: 3 LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
L +C+ L+ L +H ++ L D ++ Y G L + + +FD ++
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
W +I Y+ N F + ++ ++ +M+ + V ACS L L G + H
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 621
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
+K + D I S++ Y + G + + KVF+ + + SW+++I Y + E
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 681
Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
+K+F M R G PD +T L + AC H ++ ++ + +SF +
Sbjct: 682 AIKLFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLIHEGLRYLDQMKSSFGL 730
Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
K + +I R+G KAL + E+ EE ++
Sbjct: 731 -------------------KPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGI 769
Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
++L SC L G+ V ++ + PE L YA GK + KV +
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 360 GERNI-----LSW--------NMLISEYARKGMSK-EALELLVQMQ--TWGLMPDSFSVA 403
E ++ SW + ++ E G + ++L +++M+ G PD+ SV
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS---LIDMYSK---CGFKNLAYLLFE 457
LS + Q+ GH K+ +++S I +Y C + A L
Sbjct: 888 HDLSEEEKIE------QLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLIS 941
Query: 458 RIQQKSVVMWNSMICGFYQNG 478
++ ++ +V+ ++ ++NG
Sbjct: 942 KVMEREIVVRDNKRFHHFKNG 962
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/699 (33%), Positives = 393/699 (56%), Gaps = 22/699 (3%)
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
W L++ + +N E++L Y MI N+ +P++L+A + L D+ G+++H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 123 KCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
K G+ D V + +++ Y + G KVFD+++ R+ VSW+S+I+S L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELC---SLRPARSIHGHVLRRKIKIDGPLGNSFI 238
+ F M+ E VEP T++S+ AC L L + +H + LR K +++ + N+ +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243
Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
MY K G L S++ R +W ++S ++ +ALE +M+ EP+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
T+ +VL +C+ L LR GK +H ++ G E ++G AL++ Y C ++ +V
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQL 417
+ +R I WN +I+ Y++ KEAL L + M+ + GL+ +S ++A + AC G+
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 418 GLQIHGHVIK--IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFY 475
IHG V+K +D +D FVQ++L+DMYS+ G ++A +F +++ + +V WN+MI G+
Sbjct: 424 KEAIHGFVVKRGLD-RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 476 QNGNSLEAINLFHQMY-----------LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
+ + +A+ L H+M L+ + +T +T + +C+ + L KGK +H
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
I + D+ + +AL DMYAKCG LQ +++VFD + ++NV++W+ +I YGMHG +A
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 585 ASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVD 643
L + M+ G+KPNEVTF+++ ACSHSG V+EG F M+ +GVEP HYAC+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 644 LLSRSGDIEGAFKMIHSMPFPAN-GSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
LL R+G I+ A+++++ MP N W +LL RIH +++ + + L N
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+Y LL+NIY+ G WD+ +VR M+ G++K PG S I
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Score = 239 bits (609), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 160/603 (26%), Positives = 305/603 (50%), Gaps = 26/603 (4%)
Query: 3 LFRSCTNLRKL---TRLHAHLLVTGLHYDP-PASTRLIESYAEMGSLRSSRLVFDTFKEP 58
L ++ +L+ + ++HAH+ G D + L+ Y + G + VFD E
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 59 DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG---DLGSGE 115
+ W LI +E ++ + M+ E S+F SV+ ACS+L L G+
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
+VH ++ G + + I +++ YG+ G L ++ + RD+V+W+++++S N
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR-KIKIDGPLG 234
+ E L+ MV EGVEPD T+ S+ AC L LR + +H + L+ + + +G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE-VKE 293
++ + MY C +LS R F + R W AMI+ Y+++ ++AL F+ M E
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
N T+ V+ +C G +++H ++++G+ + ++ L++ Y+ GK+
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD-RFVQNTLMDMYSRLGKIDIAM 460
Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW-----------GLMPDSFSV 402
++ + +R++++WN +I+ Y ++AL LL +MQ L P+S ++
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 403 ASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQ 461
+ L +C + +L G +IH + IK + D V S+L+DMY+KCG ++ +F++I Q
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Query: 462 KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWV 521
K+V+ WN +I + +GN EAI+L M + ++ +EVTF++ ACS+ G +++G +
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Query: 522 HHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE--RNVVSWSAMIDCYGMH 578
+ + YGV + D+ + G ++ A ++ + M +WS+++ +H
Sbjct: 641 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700
Query: 579 GQL 581
L
Sbjct: 701 NNL 703
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/554 (26%), Positives = 277/554 (50%), Gaps = 25/554 (4%)
Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
SR W ++ S + + E + + M+ G++PD +L +A +L + +
Sbjct: 59 SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 218 IHGHVLRRKIKIDG-PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
IH HV + +D + N+ + +Y KCGD + + F +I +R SW ++IS
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW---LREGKSVHCQIIRKGMGPEYD 333
++ ALE+F ML+ EP+ TL++V+ +C+ L L GK VH +RK G
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK--GELNS 236
Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
++ L+ Y + GK++ + ++ + G R++++WN ++S + EALE L +M
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNL 451
G+ PD F+++S L AC ++ L+ G ++H + +K DE FV S+L+DMY C
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACS 510
+F+ + + + +WN+MI G+ QN + EA+ LF M + L + T + AC
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 511 NIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSA 570
G + + +H ++ G+ +D ++ L DMY++ G + A R+F M +R++V+W+
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 571 MIDCYGMHGQLNDAASLFKQMLD-----------SGIKPNEVTFMNILWACSHSGSVEEG 619
MI Y DA L +M + +KPN +T M IL +C+ ++ +G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
K + D+ + +VD+ ++ G ++ + K+ +P N W ++ +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGM 595
Query: 680 H----KRIDVMKTI 689
H + ID+++ +
Sbjct: 596 HGNGQEAIDLLRMM 609
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 248/519 (47%), Gaps = 25/519 (4%)
Query: 35 LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATIS 94
L+ Y ++G L SS+++ +F D W ++ N E++ +M+ E
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 95 NFIYPSVLRACSSLGDLGSGEKVHGRIIKCG-FDKDDVIQTSILCTYGEFGCLDDARKVF 153
F SVL ACS L L +G+++H +K G D++ + ++++ Y + R+VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSL 212
D M R + W+++IA Y N E L +F M G+ + TM + AC +
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
+IHG V++R + D + N+ + MYS+ G + A R F K+E R +W MI+ Y
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 273 NRSGWFQKALESFVKMLEVKE-----------EPNLITLITVLGSCAGLGWLREGKSVHC 321
S + AL KM ++ +PN ITL+T+L SCA L L +GK +H
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
I+ + + +G AL++ YA+CG + KV I ++N+++WN++I Y G +
Sbjct: 542 YAIKNNLATDV-AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-----CKDEFVQ 436
EA++LL M G+ P+ + S +AC + G + GL+I +V+K D D +
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHY-- 657
Query: 437 SSLIDMYSKCGFKNLAYLLFERIQQ--KSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
+ ++D+ + G AY L + + W+S++ G + N+LE + Q +
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL-GASRIHNNLEIGEIAAQNLIQL 716
Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
++ S+ G +K V + GVRK+
Sbjct: 717 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 5/409 (1%)
Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGK 317
+ R W ++ RS ++A+ ++V M+ + +P+ +L + A L + GK
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 318 SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARK 377
+H + + G G + + L+ Y +CG KV I ERN +SWN LIS
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 378 GMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQLGLQIHGHVIKIDCKDEF 434
+ ALE M + P SF++ S ++AC N+ L +G Q+H + ++ + F
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237
Query: 435 VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC 494
+ ++L+ MY K G + +L + +V WN+++ QN LEA+ +M L
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYIDTALTDMYAKCGDLQTA 553
+E DE T + + ACS++ L GK +H + G + ++ ++ +AL DMY C + +
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDS-GIKPNEVTFMNILWACSH 612
+RVFD M +R + W+AMI Y + +A LF M +S G+ N T ++ AC
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 613 SGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
SG+ + + G++ D ++D+ SR G I+ A ++ M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 1 MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
M + SC L L + +HA+ + L D + L++ YA+ G L+ SR VFD +
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Query: 58 PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
+ W V+I Y + +E+I L M+ + + + SV ACS G + G ++
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Query: 118 HGRIIKC--GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD---VVSWSSIIAS 170
++K G + ++ G G + +A ++ + M RD +WSS++ +
Sbjct: 641 F-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLLGA 696
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 360/643 (55%), Gaps = 6/643 (0%)
Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
+L CSSL +L ++ + K G ++ QT ++ + +G +D+A +VF+ + S+
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
V + +++ + +D+ + L+ F M + VEP L + CG+ LR + IHG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
+++ +D MY+KC + A + F ++ +R SW +++ Y+++G +
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
ALE M E +P+ IT+++VL + + L + GK +H +R G + + AL+
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN-ISTALV 278
Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
+ YA+CG + ++ + ERN++SWN +I Y + KEA+ + +M G+ P
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERI 459
SV +L AC ++G L+ G IH +++ ++ V +SLI MY KC + A +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 460 QQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
Q +++V WN+MI GF QNG ++A+N F QM ++ D T+++ I A + + K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
W+H ++ + K++++ TAL DMYAKCG + A+ +FD MSER+V +W+AMID YG HG
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHY 638
A LF++M IKPN VTF++++ ACSHSG VE G K ++ + +E + HY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 639 ACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGT 698
MVDLL R+G + A+ I MP +++GA+L C+IHK ++ + + L
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 638
Query: 699 NDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+D GY+ LL+NIY W++ G+VR M GL+K PG S +
Sbjct: 639 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/653 (27%), Positives = 325/653 (49%), Gaps = 43/653 (6%)
Query: 3 LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
L C++L++L ++ + GL+ + T+L+ + GS+ + VF+ + +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
+ ++K + + ++++ + +M + + + NF Y +L+ C +L G+++HG
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDEAELRVGKEIHGL 160
Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
++K GF D T + Y + +++ARKVFD+M RD+VSW++I+A Y N
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
L+M SM E ++P F+T++S+ A L + + IHG+ +R + + + M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
Y+KCG L +A + F + +R SW +MI Y ++ ++A+ F KML+ +P +++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
+ L +CA LG L G+ +H + G+ + +LI Y +C ++ + +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN-SLISMYCKCKEVDTAASMFGKLQ 399
Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
R ++SWN +I +A+ G +AL QM++ + PD+F+ S ++A +
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
IHG V++ C D+ FV ++L+DMY+KCG +A L+F+ + ++ V WN+MI G+ +G
Sbjct: 460 IHGVVMR-SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
A+ LF +M ++ + VTFL+ I ACS+ G +E G L + + K+ Y
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG------LKCFYMMKENYSIE 572
Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
D Y AM+D G G+LN+A QM +KP
Sbjct: 573 LSMDHYG------------------------AMVDLLGRAGRLNEAWDFIMQM---PVKP 605
Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
+ +L AC +V + A R+F + PD Y ++ + R+ +
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAE--KAAERLFELNPDDGGYHVLLANIYRAASM 656
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/739 (31%), Positives = 396/739 (53%), Gaps = 8/739 (1%)
Query: 9 NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
+L L + +A ++ GL + +++LI SYA G S VF D F+W +IK
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 69 CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK-CGFD 127
+ N + S+ + M+ + +F P V+ AC+ L G VHG ++K GFD
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158
Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF--- 184
++ + S + Y + G L DA VFD+M RDVV+W++II+ + N + GL
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
HS + +P+ T+ +AC L +L+ R +HG ++ + + +S YSK
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
G+ A +F ++ SWT++I+ RSG +++ + F +M P+ + + ++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER-N 363
+ + +GK+ H +IR + + +L+ Y + +S EK+ I E N
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLD-STVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397
Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
+WN ++ Y + + +EL ++Q G+ DS S S +S+C ++G++ LG +H
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHC 457
Query: 424 HVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
+V+K V +SLID+Y K G +A+ +F +V+ WN+MI + S +
Sbjct: 458 YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEK 516
Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
AI LF +M + +T +T + AC N G LE+G+ +H + ++ + AL D
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
MYAKCG L+ ++ +FD+ ++++ V W+ MI YGMHG + A +LF QM +S +KP T
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 603 FMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
F+ +L AC+H+G VE+GK F M + V+P+L+HY+C+VDLLSRSG++E A + SMP
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
F +G IWG LL+ C H ++ + + + ++GYY +L+N+Y+ G W+E +
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAER 756
Query: 723 VRSIMEVTGLKKVPGYSTI 741
R +M +G+ K G+S +
Sbjct: 757 AREMMRESGVGKRAGHSVV 775
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 299/587 (50%), Gaps = 11/587 (1%)
Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSW 164
C L S K + II G ++ + + ++ +Y +G + + +VF +T RD+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 165 SSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLR 224
+SII ++F N D + L F SM+ G PD T + AC EL +HG VL+
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 225 R-KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
+ +G SF+ YSKCG L A F ++ R +WTA+IS + ++G + L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 284 SFVKMLEVK---EEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
KM ++PN TL +C+ LG L+EG+ +H ++ G+ ++ ++
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS-KFVQSSMF 272
Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
FY++ G SE +G+ ++ SW +I+ AR G +E+ ++ +MQ G+ PD
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDC--KDEFVQSSLIDMYSKCGFKNLAYLLFER 458
++ ++ G + + G HG VI+ C D V +SL+ MY K ++A LF R
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGFVIR-HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR 391
Query: 459 IQQK-SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEK 517
I ++ + WN+M+ G+ + ++ I LF ++ +E+D + + I +CS+IG +
Sbjct: 392 ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLL 451
Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
GK +H ++ + I + +L D+Y K GDL A R+F ++ NV++W+AMI Y
Sbjct: 452 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVH 510
Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
Q A +LF +M+ KP+ +T + +L AC ++GS+E G+ + E +L
Sbjct: 511 CEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSL 570
Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
A ++D+ ++ G +E + ++ + + W +++G +H ++
Sbjct: 571 SAALIDMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVE 616
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/645 (33%), Positives = 372/645 (57%), Gaps = 4/645 (0%)
Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
SVL+ C+ L G++V I GF D + + + Y G L +A +VFD++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 160 DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 219
+ W+ ++ + D S + +F M+ GVE D T ++++ L S+ +H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 220 GHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQ 279
G +L+ +GNS + Y K + SA + F ++ +R SW ++I+ Y +G +
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 280 KALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPAL 339
K L FV+ML E +L T+++V CA + G++VH ++ E D L
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE-DRFCNTL 337
Query: 340 IEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDS 399
++ Y++CG + + V + +R+++S+ +I+ YAR+G++ EA++L +M+ G+ PD
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 400 FSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFER 458
++V + L+ C L G ++H + + D D FV ++L+DMY+KCG A L+F
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEK 517
++ K ++ WN++I G+ +N + EA++LF+ + DE T + AC+++ +K
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 518 GKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGM 577
G+ +H ++ G D ++ +L DMYAKCG L A +FD ++ +++VSW+ MI YGM
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQ 636
HG +A +LF QM +GI+ +E++F+++L+ACSHSG V+EG +FN MR +EP ++
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637
Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVT 696
HYAC+VD+L+R+GD+ A++ I +MP P + +IWGALL GCRIH + + + + +++
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Query: 697 GTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+ GYY L++NIYAE W++ ++R + GL+K PG S I
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 302/555 (54%), Gaps = 7/555 (1%)
Query: 23 TGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILL 82
G D ++L Y G L+ + VFD K + W +L+ + F SI L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 83 YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
+ KM+ + ++ + V ++ SSL + GE++HG I+K GF + + + S++ Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
+D ARKVFD+MT RDV+SW+SII Y N +GL +F M+ G+E D T++S+
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
C + + R++H ++ + N+ + MYSKCGDL SA+ F ++ R
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
S+T+MI+ Y R G +A++ F +M E P++ T+ VL CA L EGK VH
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
I +G + ++ AL++ YA+CG M E E V + ++I+SWN +I Y++ + E
Sbjct: 423 IKENDLGFDI-FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 383 ALELL-VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLI 440
AL L + ++ PD +VA L AC ++ + G +IHG++++ D V +SL+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
DMY+KCG LA++LF+ I K +V W MI G+ +G EAI LF+QM +E DE+
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID--TALTDMYAKCGDLQTAQRVFD 558
+F++ + ACS+ G +++G W ++ + + + ++ + DM A+ GDL A R +
Sbjct: 602 SFVSLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
Query: 559 SMS-ERNVVSWSAMI 572
+M + W A++
Sbjct: 661 NMPIPPDATIWGALL 675
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 257/507 (50%), Gaps = 15/507 (2%)
Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
D+ FD R V ++ + + ++ ++ +K+ + ++P T+ S+ + C
Sbjct: 52 DSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCA 105
Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF--VKIEKRCTTSW 265
+ SL+ + + + ID LG+ +MY+ CGDL A R F VKIEK W
Sbjct: 106 DSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK--ALFW 163
Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
+++ +SG F ++ F KM+ E + T V S + L + G+ +H I++
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
G G E + +G +L+ FY + ++ KV + ER+++SWN +I+ Y G++++ L
Sbjct: 224 SGFG-ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLIDMY 443
+ VQM G+ D ++ S + C + + LG +H +K +D F ++L+DMY
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMY 341
Query: 444 SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFL 503
SKCG + A +F + +SVV + SMI G+ + G + EA+ LF +M + D T
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 504 TAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER 563
+ C+ L++GK VH + + DI++ AL DMYAKCG +Q A+ VF M +
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 564 NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVEEGKFY 622
+++SW+ +I Y + N+A SLF +L+ P+E T +L AC+ + ++G+
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSG 649
+ G D +VD+ ++ G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCG 548
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 230/475 (48%), Gaps = 7/475 (1%)
Query: 4 FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
F S ++ +LH +L +G L+ Y + + S+R VFD E D W
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264
Query: 64 AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
+I Y+ N E+ + ++ +M+ I SV C+ + G VH +K
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
F ++D ++L Y + G LD A+ VF +M+ R VVS++S+IA Y E +K+
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
F M EG+ PD T+ ++ C L + +H + + D + N+ + MY+K
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK 444
Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLIT 302
CG + AE F ++ + SW +I Y+++ + +AL F +LE K P+ T+
Sbjct: 445 CGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
VL +CA L +G+ +H I+R G + ++ +L++ YA+CG + + I +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASK 563
Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
+++SW ++I+ Y G KEA+ L QM+ G+ D S S L AC + G + G +
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623
Query: 423 GHVIKIDCKDEFV---QSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICG 473
++++ +CK E + ++DM ++ G AY E + +W +++CG
Sbjct: 624 -NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
+P S + K +H +++ G D + L++ YA+ G+L + ++FD D
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG 114
W V+I Y + F +E+I L+++M + + S+L ACS G + G
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/739 (31%), Positives = 393/739 (53%), Gaps = 5/739 (0%)
Query: 6 SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS-FMWA 64
S +NL +L R+HA ++ GL S +LI+ Y+ SS VF + ++W
Sbjct: 16 SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75
Query: 65 VLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC 124
+I+ + N F E++ Y K+ + + + +PSV++AC+ L D G+ V+ +I+
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF 184
GF+ D + +++ Y G L AR+VFD+M RD+VSW+S+I+ Y + E L+++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 185 HSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKC 244
H + + PD T+ S+ A G L ++ + +HG L+ + + N + MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 245 GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL 304
A R F +++ R + S+ MI Y + ++++ F++ L+ + +P+L+T+ +VL
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVL 314
Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
+C L L K ++ +++ G E + LI+ YA+CG M V +++ ++
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLE-STVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
+SWN +IS Y + G EA++L M D + +S + L+ G +H +
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
IK C D V ++LIDMY+KCG + +F + V WN++I + G+
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
+ + QM + + D TFL + C+++ GK +H L+ +G ++ I AL +M
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553
Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
Y+KCG L+ + RVF+ MS R+VV+W+ MI YGM+G+ A F M SGI P+ V F
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 604 MNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
+ I++ACSHSG V+EG F M+ + ++P ++HYAC+VDLLSRS I A + I +MP
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 663 FPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGK 722
+ SIW ++L CR ++ + + + + +D GY L SN YA WD+
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Query: 723 VRSIMEVTGLKKVPGYSTI 741
+R ++ + K PGYS I
Sbjct: 734 IRKSLKDKHITKNPGYSWI 752
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/565 (26%), Positives = 283/565 (50%), Gaps = 4/565 (0%)
Query: 99 PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT- 157
P + RA SS +L ++H +I G D D ++ Y F + VF +++
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
+++V W+SII ++ N E L+ + + V PD T S+ +AC L
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
++ +L + D +GN+ + MYS+ G L A + F ++ R SW ++IS Y+ G+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
+++ALE + ++ P+ T+ +VL + L +++G+ +H + K +
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL-KSGVNSVVVVNN 246
Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
L+ Y + + ++ +V + R+ +S+N +I Y + M +E++ + ++ P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 305
Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
D +V+S L ACG++ L L I+ +++K + V++ LID+Y+KCG A +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
++ K V WNS+I G+ Q+G+ +EA+ LF M + + D +T+L I + + L+
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
GK +H I G+ D+ + AL DMYAKCG++ + ++F SM + V+W+ +I
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485
Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
G + QM S + P+ TF+ L C+ + GK + FG E +LQ
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 637 HYACMVDLLSRSGDIEGAFKMIHSM 661
++++ S+ G +E + ++ M
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERM 570
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 210/419 (50%), Gaps = 2/419 (0%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
+P F + +++ LH L +G++ + L+ Y + +R VFD DS
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
+ +I Y+ EES+ ++ + + +Q SVLRAC L DL + ++
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
++K GF + ++ ++ Y + G + AR VF+ M +D VSW+SII+ Y + D+ E
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
+K+F M+ + D +T L L L L+ + +H + ++ I ID + N+ I M
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
Y+KCG++ + + F + T +W +IS R G F L+ +M + + P++ T
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
+ L CA L R GK +HC ++R G E +G ALIE Y++CG + +V +
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ-IGNALIEMYSKCGCLENSSRVFERMS 571
Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
R++++W +I Y G ++ALE M+ G++PDS + + AC + G + GL
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGL 630
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 208/433 (48%), Gaps = 37/433 (8%)
Query: 3 LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+ R+C +LR L+ ++ ++L G + LI+ YA+ G + ++R VF++ + D
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
+ W +I Y+ + E++ L+ M+ + + Y ++ + L DL G+ +H
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
IK G D + +++ Y + G + D+ K+F M + D V+W+++I++ D +
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
GL++ M + V PD T L C L + R + IH +LR + + +GN+ I
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
MYSKCG L ++ R F ++ +R +WT MI Y G +KALE+F M + P+ +
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
I ++ +C+ G + EG + ++ + Y +IE YA C V+
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKM-------KTHYKIDPMIEHYA-C--------VV--- 653
Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
++LS + IS +A E + Q + PD+ AS L AC G ++
Sbjct: 654 ---DLLSRSQKIS---------KAEEFI---QAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 420 QIHGHVIKIDCKD 432
++ +I+++ D
Sbjct: 699 RVSRRIIELNPDD 711
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/644 (34%), Positives = 356/644 (55%), Gaps = 8/644 (1%)
Query: 101 VLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRD 160
+L C+++ L + HG + G D I T ++ YG FG DAR VFD++ D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 161 VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHG 220
W ++ Y N + E +K++ +++ G D + +AC EL L + IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
+++ D + + MY+KCG++ SA + F I R WT+MI+ Y ++ ++
Sbjct: 167 QLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 281 ALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALI 340
L F +M E N T T++ +C L L +GK H +++ G+ L +L+
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS-SCLVTSLL 284
Query: 341 EFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSF 400
+ Y +CG +S +V + +++ W +I Y G EAL L +M+ + P+
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
++AS LS CG + +L+LG +HG IK+ D V ++L+ MY+KC A +FE
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMES 404
Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKW 520
+K +V WNS+I GF QNG+ EA+ LFH+M + + VT + AC+++G L G
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 521 VHHKLISYG--VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
+H + G +++ TAL D YAKCGD Q+A+ +FD++ E+N ++WSAMI YG
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQH 637
G + LF++ML KPNE TF +IL AC H+G V EGK YF++M + + P +H
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584
Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTG 697
Y CMVD+L+R+G++E A +I MP + +GA L+GC +H R D+ + + K++
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644
Query: 698 TNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+D YY L+SN+YA +G W++ +VR++M+ GL K+ G+ST+
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 329/607 (54%), Gaps = 12/607 (1%)
Query: 3 LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
L CTN+ L + H L GL D +T+L+ Y G + +RLVFD EPD ++
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
W V+++CY N E + LY +++ + ++ L+AC+ L DL +G+K+H +++
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
K D+V+ T +L Y + G + A KVF+ +T R+VV W+S+IA Y N EGL
Sbjct: 170 KVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
+F+ M V + T +L AC +L +L + HG +++ I++ L S + MY
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
KCGD+ +A R F + WTAMI Y +G +AL F KM V+ +PN +T+ +
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY-LGPALIEFYAECGKMSECEKVIHAIGE 361
VL C + L G+SVH I+ G+ +D + AL+ YA+C + + + V E
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGI---WDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
++I++WN +IS +++ G EAL L +M + + P+ +VAS SAC ++GSL +G +
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 422 HGHVIKID---CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
H + +K+ V ++L+D Y+KCG A L+F+ I++K+ + W++MI G+ + G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRKDIYID 537
+++ ++ LF +M + +E TF + + AC + G + +G K+ Y
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585
Query: 538 TALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
T + DM A+ G+L+ A + + M + +V + A + GMH + + + K+MLD +
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--L 643
Query: 597 KPNEVTF 603
P++ ++
Sbjct: 644 HPDDASY 650
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/662 (33%), Positives = 370/662 (55%), Gaps = 7/662 (1%)
Query: 83 YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
+ M+ + F +PS+L+AC+SL L G +H +++ GF D I +S++ Y +
Sbjct: 34 FSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAK 93
Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
FG L ARKVF++M RDVV W+++I Y V E + + M +G++P VT+L +
Sbjct: 94 FGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEM 153
Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
E+ L+ +H + D + NS + +Y KC + A+ F ++E+R
Sbjct: 154 LSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
SW MIS Y G + L+ +M P+ T L + L G+ +HCQ
Sbjct: 211 VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270
Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
I++ G + +L ALI Y +CGK +V+ I ++++ W ++IS R G +++
Sbjct: 271 IVKTGFDVDM-HLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEK 329
Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLID 441
AL + +M G S ++AS +++C +GS LG +HG+V++ D +SLI
Sbjct: 330 ALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLIT 389
Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE-MDEV 500
MY+KCG + + ++FER+ ++ +V WN++I G+ QN + +A+ LF +M ++ +D
Sbjct: 390 MYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSF 449
Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
T ++ +QACS+ G L GK +H +I +R +DTAL DMY+KCG L+ AQR FDS+
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
S ++VVSW +I YG HG+ + A ++ + L SG++PN V F+ +L +CSH+G V++G
Sbjct: 510 SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGL 569
Query: 621 FYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
F++M R FGVEP+ +H AC+VDLL R+ IE AFK + + G +L+ CR
Sbjct: 570 KIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRA 629
Query: 680 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
+ + +V I +++ D G+Y L + +A WD+ + + M GLKK+PG+S
Sbjct: 630 NGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689
Query: 740 TI 741
I
Sbjct: 690 KI 691
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 288/561 (51%), Gaps = 10/561 (1%)
Query: 3 LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
L ++C +L++L+ +H +LV G D S+ L+ YA+ G L +R VF+ +E D
Sbjct: 52 LLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERD 111
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
W +I CY E+ L ++M R Q + ++L S + ++ + +H
Sbjct: 112 VVHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKPGPV--TLLEMLSGVLEITQLQCLHD 168
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
+ GFD D + S+L Y + + DA+ +FD+M RD+VSW+++I+ Y ++SE
Sbjct: 169 FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSE 228
Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
LK+ + M +G+ PD T + G +C L R +H +++ +D L + I
Sbjct: 229 ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288
Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
MY KCG ++ R I + WT MIS R G +KAL F +ML+ + +
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
+ +V+ SCA LG G SVH ++R G + L +LI YA+CG + + + +
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN-SLITMYAKCGHLDKSLVIFERM 407
Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP-DSFSVASSLSACGNVGSLQLG 418
ER+++SWN +IS YA+ +AL L +M+ + DSF+V S L AC + G+L +G
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Query: 419 LQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
IH VI+ + V ++L+DMYSKCG+ A F+ I K VV W +I G+ +
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527
Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
G A+ ++ + + +E + V FL + +CS+ G +++G + ++ +GV +
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587
Query: 537 DTALTDMYAKCGDLQTAQRVF 557
+ D+ + ++ A + +
Sbjct: 588 LACVVDLLCRAKRIEDAFKFY 608
Score = 229 bits (585), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/541 (29%), Positives = 275/541 (50%), Gaps = 9/541 (1%)
Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
++S I + D + L F SM+ + PD T SL +AC L L SIH VL
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 224 RRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALE 283
D + +S + +Y+K G L A + F ++ +R WTAMI CY+R+G +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 284 SFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFY 343
+M +P +TL+ +L +G+ + + + +H + G + + +++ Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMN-SMLNLY 189
Query: 344 AECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVA 403
+C + + + + + +R+++SWN +IS YA G E L+LL +M+ GL PD +
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 404 SSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQK 462
+SLS G + L++G +H ++K D ++++LI MY KCG + +Y + E I K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 463 SVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVH 522
VV W MI G + G + +A+ +F +M + ++ + + +C+ +G + G VH
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 523 HKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLN 582
++ +G D +L MYAKCG L + +F+ M+ER++VSW+A+I Y + L
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429
Query: 583 DAASLFKQMLDSGIKP-NEVTFMNILWACSHSGSVEEGKF-YFNAMRIFGVEPDLQHYAC 640
A LF++M ++ + T +++L ACS +G++ GK + +R F + P
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTA 488
Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
+VD+ S+ G +E A + S+ + S WG L+ G H + D+ I E +G
Sbjct: 489 LVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALEIYSEFLHSGMEP 547
Query: 701 N 701
N
Sbjct: 548 N 548
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 209/415 (50%), Gaps = 4/415 (0%)
Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
T + + I+ + G ++ L +F ML K P+ T ++L +CA L L G S+H
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
Q++ G ++ Y+ +L+ YA+ G ++ KV + ER+++ W +I Y+R G+
Sbjct: 71 QVLVNGFSSDF-YISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLID 441
EA L+ +M+ G+ P ++ LS + LQ L + DC D V +S+++
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC-LHDFAVIYGFDC-DIAVMNSMLN 187
Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
+Y KC A LF++++Q+ +V WN+MI G+ GN E + L ++M + L D+ T
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
F ++ + LE G+ +H +++ G D+++ TAL MY KCG + + RV +++
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
++VV W+ MI G+ A +F +ML SG + +++ +C+ GS + G
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367
Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
+ G D ++ + ++ G ++ + + M + W A+++G
Sbjct: 368 VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/731 (30%), Positives = 375/731 (51%), Gaps = 3/731 (0%)
Query: 13 LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
+ ++HA +L GL LI+ Y+ G + +R VFD + D W +I
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 73 NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
N E+I L+ M + + + SVL AC + L GE++HG ++K GF D +
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
+++ Y G L A +F M+ RD V+++++I + +++F M +G+
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
EPD T+ SL AC +L + +H + + + + + + +Y+KC D+ +A
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
F++ E W M+ Y + + F +M + PN T ++L +C LG
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
L G+ +H QII+ Y+ LI+ YA+ GK+ ++ ++++SW +I+
Sbjct: 506 LELGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV-IKIDCK 431
Y + +AL QM G+ D + +++SAC + +L+ G QIH +
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624
Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
D Q++L+ +YS+CG +YL FE+ + + WN+++ GF Q+GN+ EA+ +F +M
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
++ + TF +A++A S +++GK VH + G + + AL MYAKCG +
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
A++ F +S +N VSW+A+I+ Y HG ++A F QM+ S ++PN VT + +L ACS
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 612 HSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
H G V++G YF +M +G+ P +HY C+VD+L+R+G + A + I MP + +W
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
LL+ C +HK +++ + L D+ Y LLSN+YA WD R M+
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 924
Query: 731 GLKKVPGYSTI 741
G+KK PG S I
Sbjct: 925 GVKKEPGQSWI 935
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/669 (26%), Positives = 321/669 (47%), Gaps = 6/669 (0%)
Query: 15 RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
+LH+ +L GL + S +L + Y G L + VFD E F W +IK N
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 75 FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSG--EKVHGRIIKCGFDKDDVI 132
E L+ +M+ E T + + VL AC G + E++H RI+ G V+
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVV 224
Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
++ Y G +D AR+VFD + +D SW ++I+ N +E +++F M G+
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
P S+ AC ++ SL +HG VL+ D + N+ + +Y G+L+SAE
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW 312
F + +R ++ +I+ ++ G+ +KA+E F +M EP+ TL +++ +C+ G
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
L G+ +H + G G AL+ YA+C + N++ WN+++
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK- 431
Y + + + QMQ ++P+ ++ S L C +G L+LG QIH +IK + +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
+ +V S LIDMY+K G + A+ + R K VV W +MI G+ Q +A+ F QM
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
+ DEV A+ AC+ + L++G+ +H + G D+ AL +Y++CG ++
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 552 TAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS 611
+ F+ + ++W+A++ + G +A +F +M GI N TF + + A S
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 612 HSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
+ ++++GK + G + + + ++ + ++ G I A K + N W
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNEVSWN 762
Query: 672 ALLNGCRIH 680
A++N H
Sbjct: 763 AIINAYSKH 771
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/627 (27%), Positives = 308/627 (49%), Gaps = 7/627 (1%)
Query: 109 GDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSII 168
G L G K+H +I+K G D + + + Y G L A KVFD+M R + +W+ +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 169 ASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC-GELCSLRPARSIHGHVLRRKI 227
+ E +F MV E V P+ T + EAC G + IH +L + +
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
+ + N I +YS+ G + A R F + + +SW AMIS +++ +A+ F
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
M + P +VL +C + L G+ +H +++ G + Y+ AL+ Y G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNALVSLYFHLG 337
Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
+ E + + +R+ +++N LI+ ++ G ++A+EL +M GL PDS ++AS +
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 408 ACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
AC G+L G Q+H + K+ + ++ +L+++Y+KC A F + ++VV+
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
WN M+ + + + +F QM + + ++ T+ + ++ C +G LE G+ +H ++I
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
+ + Y+ + L DMYAK G L TA + + ++VVSW+ MI Y + + A +
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLS 646
F+QMLD GI+ +EV N + AC+ +++EG+ + G DL +V L S
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637
Query: 647 RSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTL 706
R G IE ++ N + W AL++G + + + ++ G DN +T
Sbjct: 638 RCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNEEALRVFVRMNREGI-DNNNFTF 695
Query: 707 LSNIYA--EEGNWDEFGKVRSIMEVTG 731
S + A E N + +V +++ TG
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTG 722
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 224/465 (48%), Gaps = 37/465 (7%)
Query: 3 LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+ ++C L L ++H+ ++ T + + LI+ YA++G L ++ + F D
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
W +I Y NF ++++ + +M+ + + AC+ L L G+++H
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
+ GF D Q +++ Y G ++++ F++ + D ++W+++++ + + + E
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
L++F M REG++ + T S +A E +++ + +H + + + + N+ I
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
MY+KCG + AE+ F+++ + SW A+I+ Y++ G+ +AL+SF +M+ PN +T
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
L+ VL +C+ +G + +G + + M EY L P K H +
Sbjct: 796 LVGVLSACSHIGLVDKGIAYF-----ESMNSEYG-LSP----------------KPEHYV 833
Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
++L+ R G+ A E + +M + PD+ + LSAC ++++G
Sbjct: 834 CVVDMLT---------RAGLLSRAKEFIQEMP---IKPDALVWRTLLSACVVHKNMEIGE 881
Query: 420 QIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSV 464
H+++++ +D L ++Y+ + L +++++K V
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/671 (33%), Positives = 359/671 (53%), Gaps = 5/671 (0%)
Query: 73 NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
N EE++ L + M + + ++ +++R C G KV+ + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV-REG 191
+ L + FG L DA VF KM+ R++ SW+ ++ Y E + ++H M+ G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
V+PD T + CG + L + +H HV+R ++D + N+ I MY KCGD+ SA
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
F ++ +R SW AMIS Y +G + LE F M + +P+L+TL +V+ +C LG
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
R G+ +H +I G + +L + Y G E EK+ + ++I+SW +I
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCN-SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
S Y + +A++ M + PD +VA+ LSAC +G L G+++H IK
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 432 DE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
V ++LI+MYSKC + A +F I +K+V+ W S+I G N EA+ QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDL 550
+ L+ + +T A+ AC+ IG L GK +H ++ GV D ++ AL DMY +CG +
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 551 QTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWAC 610
TA F+S +++V SW+ ++ Y GQ + LF +M+ S ++P+E+TF+++L C
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 611 SHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIW 670
S S V +G YF+ M +GV P+L+HYAC+VDLL R+G+++ A K I MP + ++W
Sbjct: 609 SKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 671 GALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVT 730
GALLN CRIH +ID+ + + + GYY LL N+YA+ G W E KVR +M+
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728
Query: 731 GLKKVPGYSTI 741
GL G S +
Sbjct: 729 GLTVDAGCSWV 739
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 292/547 (53%), Gaps = 6/547 (1%)
Query: 39 YAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FI 97
+ G+L + VF E + F W VL+ Y +F+E++ LYH+M+ + +
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 98 YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
+P VLR C + DL G++VH +++ G++ D + +++ Y + G + AR +FD+M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
RD++SW+++I+ YF+N EGL++F +M V+PD +T+ S+ AC L R R
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
IH +V+ +D + NS MY G AE+ F ++E++ SWT MIS Y +
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
KA++++ M + +P+ IT+ VL +CA LG L G +H I+ + Y +
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL-ISYVIVAN 437
Query: 338 ALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMP 397
LI Y++C + + + H I +N++SW +I+ EAL L QM+ L P
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQP 496
Query: 398 DSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLF 456
++ ++ ++L+AC +G+L G +IH HV++ D+F+ ++L+DMY +CG N A+ F
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 556
Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
Q+K V WN ++ G+ + G + LF +M + + DE+TF++ + CS +
Sbjct: 557 NS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVR 615
Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCY 575
+G K+ YGV ++ + D+ + G+LQ A + M + W A+++
Sbjct: 616 QGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Query: 576 GMHGQLN 582
+H +++
Sbjct: 676 RIHHKID 682
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 207/420 (49%), Gaps = 6/420 (1%)
Query: 3 LFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+ R+C + L R +H H++ G D LI Y + G ++S+RL+FD D
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
W +I Y N E + L+ M SV+ AC LGD G +H
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
+I GF D + S+ Y G +A K+F +M +D+VSW+++I+ Y N +
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
+ + M ++ V+PD +T+ ++ AC L L +H ++ ++ + N+ I
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLIT 299
MYSKC + A F I ++ SWT++I+ + +AL F++ +++ +PN IT
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAIT 500
Query: 300 LITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
L L +CA +G L GK +H ++R G+G + D+L AL++ Y CG+M+ ++
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLD-DFLPNALLDMYVRCGRMNTAWSQFNS- 558
Query: 360 GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGL 419
++++ SWN+L++ Y+ +G +EL +M + PD + S L C ++ GL
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 198/438 (45%), Gaps = 38/438 (8%)
Query: 11 RKLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKC 69
R+L R +HA+++ TG D L + Y GS R + +F + D W +I
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 70 YMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKD 129
Y +N +++I Y M ++ +VL AC++LGDL +G ++H IK
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 130 DVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVR 189
++ +++ Y + C+D A +F + ++V+SW+SIIA N E L +F ++
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 491
Query: 190 EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
++P+ +T+ + AC + +L + IH HVLR + +D L N+ + MY +CG + +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
A F +K+ TSW +++ Y+ G +E F +M++ + P+ IT I++L C+
Sbjct: 552 AWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
+R+G ++ G+ P + +++ G++ E K I
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYA-CVVDLLGRAGELQEAHKFI------------- 656
Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID 429
Q + PD + L+AC + LG H+ ++D
Sbjct: 657 ---------------------QKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELD 695
Query: 430 CKDEFVQSSLIDMYSKCG 447
K L ++Y+ CG
Sbjct: 696 KKSVGYYILLCNLYADCG 713
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
G NG EA+ L + M + +DE F+ ++ C E+G V+ +S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML 592
+ + A M+ + G+L A VF MSERN+ SW+ ++ Y G ++A L+ +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 593 -DSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDI 651
G+KP+ TF +L C + GK + +G E D+ ++ + + GD+
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 652 EGAFKMIHSMPFPANGSIWGALLNG 676
+ A + MP S W A+++G
Sbjct: 248 KSARLLFDRMPRRDIIS-WNAMISG 271
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/733 (31%), Positives = 396/733 (54%), Gaps = 25/733 (3%)
Query: 29 PPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIR 88
P +RL + G+ + +R +FD +P + +W +I ++ NN E++L Y +M +
Sbjct: 40 PSIRSRL-SKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM-K 97
Query: 89 EQATISN---FIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
+ A +N + Y S L+AC+ +L +G+ VH +I+C + V+ S++ Y C
Sbjct: 98 KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY--VSC 155
Query: 146 L--------DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV 197
L D RKVFD M ++VV+W+++I+ Y +E + F M+R V+P V
Sbjct: 156 LNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPV 215
Query: 198 TMLSLAEACGELCSLRPARSIHGHVLR--RKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
+ +++ A S++ A +G +L+ + D + +S I MY++ GD+ S+ R F
Sbjct: 216 SFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD 275
Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLR 314
+R W MI Y ++ +++E F++ + KE + +T + + + L +
Sbjct: 276 SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVE 335
Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
G+ H + K + +L+ Y+ CG + + V ++ ER+++SWN +IS +
Sbjct: 336 LGRQFH-GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAF 394
Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
+ G+ E L L+ +MQ G D +V + LSA N+ + ++G Q H +I+ + E
Sbjct: 395 VQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG 454
Query: 435 VQSSLIDMYSKCGFKNLAYLLFER--IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
+ S LIDMYSK G ++ LFE ++ WNSMI G+ QNG++ + +F +M
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
+ + VT + + ACS IG ++ GK +H I + +++++ +AL DMY+K G ++
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
A+ +F ERN V+++ MI YG HG A SLF M +SGIKP+ +TF+ +L ACS+
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSY 634
Query: 613 SGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPAN-GSIW 670
SG ++EG F MR ++ ++P +HY C+ D+L R G + A++ + + N +W
Sbjct: 635 SGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694
Query: 671 GALLNGCRIHKRIDVMKTIEKELSV--TGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIME 728
G+LL C++H +++ +T+ + L+ G N +GY LLSN+YAEE W KVR M
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMR 754
Query: 729 VTGLKKVPGYSTI 741
GLKK G S I
Sbjct: 755 EKGLKKEVGRSGI 767
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/711 (30%), Positives = 374/711 (52%), Gaps = 4/711 (0%)
Query: 34 RLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATI 93
+L+ Y + GSL + VFD + +F W +I Y+ N ++ LY M E +
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 94 SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
+P++L+AC+ L D+ SG ++H ++K G+ I +++ Y + L AR++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 154 DKMTSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
D + D V W+SI++SY + E L++F M G P+ T++S AC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 213 RPARSIHGHVLRRKI-KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
+ + IH VL+ + + N+ I MY++CG + AER ++ +W ++I
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
Y ++ +++ALE F M+ + + +++ +++ + L L G +H +I+ G
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
+G LI+ Y++C + + +++++SW +I+ YA+ EALEL +
Sbjct: 421 LQ-VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 392 TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNL 451
+ D + S L A + S+ + +IH H+++ D +Q+ L+D+Y KC
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539
Query: 452 AYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSN 511
A +FE I+ K VV W SMI NGN EA+ LF +M L D V L + A ++
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
+ L KG+ +H L+ G + I A+ DMYA CGDLQ+A+ VFD + + ++ +++M
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFG 630
I+ YGMHG A LF +M + P+ ++F+ +L+ACSH+G ++EG+ + M +
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
+EP +HY C+VD+L R+ + AF+ + M +W ALL CR H ++ +
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAA 779
Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+ L + G L+SN++AE+G W++ KVR+ M+ +G++K PG S I
Sbjct: 780 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830
Score = 276 bits (705), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 159/521 (30%), Positives = 274/521 (52%), Gaps = 8/521 (1%)
Query: 90 QATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKC--GFDKDDVIQTSILCTYGEFGCLD 147
+ + F Y VL C + G ++H RI K F+ D + ++ YG+ G LD
Sbjct: 77 NSPVEAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLD 133
Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
DA KVFD+M R +W+++I +Y N + + L ++ +M EGV + +L +AC
Sbjct: 134 DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 193
Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKI-EKRCTTSWT 266
+L +R +H +++ G + N+ + MY+K DL +A R F EK W
Sbjct: 194 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253
Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
+++S Y+ SG + LE F +M PN T+++ L +C G + + GK +H +++
Sbjct: 254 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 313
Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
Y+ ALI Y CGKM + E+++ + ++++WN LI Y + M KEALE
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSK 445
M G D S+ S ++A G + +L G+++H +VIK V ++LIDMYSK
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Query: 446 CGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTA 505
C F R+ K ++ W ++I G+ QN +EA+ LF + +E+DE+ +
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 506 IQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
++A S + + K +H ++ G+ D I L D+Y KC ++ A RVF+S+ ++V
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 552
Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
VSW++MI ++G ++A LF++M+++G+ + V + I
Sbjct: 553 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 270/523 (51%), Gaps = 8/523 (1%)
Query: 3 LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
L ++C LR + + LH+ L+ G H L+ YA+ L ++R +FD F+E
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 59 DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVH 118
D+ +W ++ Y + E++ L+ +M +++ S L AC G+++H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 119 GRIIKCGFDKDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
++K ++ + +++ Y G + A ++ +M + DVV+W+S+I Y N
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
E L+ F M+ G + D V+M S+ A G L +L +H +V++ + +GN+
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
I MYSKC R F+++ + SWT +I+ Y ++ +ALE F + + + E +
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487
Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
+ L ++L + + L + K +HC I+RKG+ + L++ Y +C M +V
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFE 545
Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
+I ++++SW +IS A G EA+EL +M GL DS ++ LSA ++ +L
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 605
Query: 418 GLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQ 476
G +IH ++++ C + + +++DMY+ CG A +F+RI++K ++ + SMI +
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665
Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGK 519
+G A+ LF +M + D ++FL + ACS+ G L++G+
Sbjct: 666 HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 708
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 7/281 (2%)
Query: 401 SVASSLSACGNVGSLQLGLQIHGHVIKI--DCKDEFVQSSLIDMYSKCGFKNLAYLLFER 458
+ A L CG ++ G Q+H + K + +F+ L+ MY KCG + A +F+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 459 IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG 518
+ ++ WN+MI + NG A+ L+ M + + + +F ++AC+ + + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NVVSWSAMIDCYGM 577
+H L+ G +I AL MYAK DL A+R+FD E+ + V W++++ Y
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 578 HGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH 637
G+ + LF++M +G PN T ++ L AC + GK +A + +
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK-EIHASVLKSSTHSSEL 320
Query: 638 YAC--MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
Y C ++ + +R G + A +++ M A+ W +L+ G
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG 360
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 160/385 (41%), Gaps = 44/385 (11%)
Query: 13 LTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
+ +H H+L GL D L++ Y + ++ + VF++ K D W +I
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 73 NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
N E++ L+ +M+ + + +L A +SL L G ++H +++ GF + I
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
+++ Y G L A+ VFD++ + ++ ++S+I +Y + +++F M E V
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG--DLLSA 250
PD ++ L+L AC L R ++ + +++ P ++ + G + +
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFL-KIMEHEYELE-PWPEHYVCLVDMLGRANCVVE 742
Query: 251 ERTFVKIEKRCTTS--WTAMI-SCYNRSG------WFQKALESFVKMLEVKEEPNLITLI 301
FVK+ K T+ W A++ +C + S Q+ LE LE K NL+ +
Sbjct: 743 AFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE-----LEPKNPGNLVLVS 797
Query: 302 TVLGSCA---------------------GLGWLREGKSVHCQIIRKGMGPE----YDYLG 336
V G W+ VH R PE Y+ L
Sbjct: 798 NVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 857
Query: 337 PALIEFYAECGKMSECEKVIHAIGE 361
+ E G +++ + V+H + E
Sbjct: 858 EVTRKLEREVGYVADTKFVLHNVDE 882
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/728 (31%), Positives = 370/728 (50%), Gaps = 17/728 (2%)
Query: 24 GLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLY 83
G D A +I +Y +G L+ +RL+F PD W V+I + +I +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 84 HKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEF 143
M + + SVL A + +L G VH IK G + + +S++ Y +
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLA 203
++ A KVF+ + ++ V W+++I Y N + + +++F M G D T SL
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 204 EACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTT 263
C L H ++++K+ + +GN+ + MY+KCG L A + F ++ R
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 264 SWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
+W +I Y + +A + F +M + L + L +C + L +GK VHC
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 324 IRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
++ G+ + + G +LI+ Y++CG + + KV ++ E +++S N LI+ Y++ + +EA
Sbjct: 556 VKCGLDRDL-HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEA 613
Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKDEFVQSSLID 441
+ L +M T G+ P + A+ + AC SL LG Q HG + K + E++ SL+
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 442 MY-SKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
MY + G L E KS+V+W M+ G QNG EA+ + +M + + D+
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
TF+T ++ CS + L +G+ +H + D L DMYAKCGD++ + +VFD M
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 561 SER-NVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
R NVVSW+++I+ Y +G DA +F M S I P+E+TF+ +L ACSH+G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 620 KFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCR 678
+ F M +G+E + H ACMVDLL R G ++ A I + + +W +LL CR
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 679 IH-----KRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
IH I K IE E ++ Y LLSNIYA +G W++ +R +M G+K
Sbjct: 914 IHGDDIRGEISAEKLIELE-----PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Query: 734 KVPGYSTI 741
KVPGYS I
Sbjct: 969 KVPGYSWI 976
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 179/678 (26%), Positives = 320/678 (47%), Gaps = 41/678 (6%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
MP R LR +H+ L+ G+ + +++ YA+ + + FD F E D
Sbjct: 68 MPQ-RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDV 125
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
W ++ Y + + + + Q + F + VL C+ ++ G ++H
Sbjct: 126 TAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCS 185
Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
+IK G +++ +++ Y + + DAR+VF+ + + V W+ + + Y E
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEA 245
Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
+ +F M EG PD + +++ I
Sbjct: 246 VLVFERMRDEGHRPDHLAFVTV-----------------------------------INT 270
Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
Y + G L A F ++ +W MIS + + G A+E F M + + TL
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
+VL + + L G VH + I+ G+ Y+G +L+ Y++C KM KV A+
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
E+N + WN +I YA G S + +EL + M++ G D F+ S LS C L++G Q
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 421 IHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
H +IK K+ FV ++L+DMY+KCG A +FER+ + V WN++I + Q+ N
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTA 539
EA +LF +M L + D + ++AC+++ L +GK VH + G+ +D++ ++
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 540 LTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
L DMY+KCG ++ A++VF S+ E +VVS +A+I Y L +A LF++ML G+ P+
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPS 628
Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA-CMVDLLSRSGDIEGAFKMI 658
E+TF I+ AC S+ G + + G + ++ ++ + S + A +
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 659 HSMPFPANGSIWGALLNG 676
+ P + +W +++G
Sbjct: 689 SELSSPKSIVLWTGMMSG 706
Score = 259 bits (661), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 294/569 (51%), Gaps = 6/569 (1%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+HA + GL + + L+ Y++ + ++ VF+ +E + W +I+ Y N
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 76 FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
+ + L+ M I +F + S+L C++ DL G + H IIK K+ + +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
++ Y + G L+DAR++F++M RD V+W++II SY + + SE +F M G+ D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
+ S +AC + L + +H ++ + D G+S I MYSKCG + A + F
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
+ + S A+I+ Y+++ ++A+ F +ML P+ IT T++ +C L
Sbjct: 589 SLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE-CEKVIHAIGERNILSWNMLISEY 374
G H QI ++G E +YLG +L+ Y M+E C ++I+ W ++S +
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DE 433
++ G +EAL+ +M+ G++PD + + L C + SL+ G IH + + DE
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 434 FVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFHQMYL 492
++LIDMY+KCG + +F+ ++++S VV WNS+I G+ +NG + +A+ +F M
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCGDLQ 551
+ + DE+TFL + ACS+ G++ G+ + +I YG+ + + D+ + G LQ
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 887
Query: 552 TAQRVFDSMSER-NVVSWSAMIDCYGMHG 579
A ++ + + + WS+++ +HG
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 159/349 (45%), Gaps = 21/349 (6%)
Query: 385 ELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYS 444
+L + + MP ++A + + SL LG+ G + ++++D+Y+
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRL----------GNAIVDLYA 106
Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
KC + A F+ ++ K V WNSM+ + G + + F ++ N + ++ TF
Sbjct: 107 KCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI 165
Query: 505 AIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERN 564
+ C+ +E G+ +H +I G+ ++ Y AL DMYAKC + A+RVF+ + + N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
V W+ + Y G +A +F++M D G +P+ + F+ ++ G +++ + F
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFG 285
Query: 625 AMRIFGVEPDLQHYACMVDLLSRSG----DIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
M PD+ + M+ + G IE F M S + S G++L+ I
Sbjct: 286 EMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAIGIV 340
Query: 681 KRIDVMKTIEKELSVTGTNDNGYY-TLLSNIYAEEGNWDEFGKVRSIME 728
+D+ + E G N Y + L ++Y++ + KV +E
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 1 MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
+ + R C+ +LR+ +H+ + D S LI+ YA+ G ++ S VFD +
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR 795
Query: 58 PDSFM-WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
+ + W LI Y N + E+++ ++ M + + VL ACS G + G K
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRK 855
Query: 117 VHGRII-KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIAS 170
+ +I + G + ++ G +G L +A + + D WSS++ +
Sbjct: 856 IFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 360/650 (55%), Gaps = 11/650 (1%)
Query: 100 SVLRACS-SLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD--DARKVFDKM 156
S+LR C+ S L + VH RI+ G +D V+ S++ Y F C D AR VF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVY--FTCKDHCSARHVFENF 65
Query: 157 TSR-DVVSWSSIIASYFDNADVSEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRP 214
R DV W+S+++ Y N+ + L++F ++ + PD T ++ +A G L
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
R IH V++ D + +S + MY+K ++ + F ++ +R SW +ISC+ +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
SG +KALE F +M EPN ++L + +C+ L WL GK +H + ++KG + +Y
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD-EY 244
Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
+ AL++ Y +C + +V + +++++WN +I Y KG SK +E+L +M G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAY 453
P ++ S L AC +L G IHG+VI+ + D +V SLID+Y KCG NLA
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
+F + Q+ WN MI + GN +A+ ++ QM ++ D VTF + + ACS +
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
LEKGK +H + + D + +AL DMY+KCG+ + A R+F+S+ +++VVSW+ MI
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
YG HGQ +A F +M G+KP+ VT + +L AC H+G ++EG +F+ MR +G+E
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA-NGSIWGALLNGCRIHKRIDVMKTIEK 691
P ++HY+CM+D+L R+G + A+++I P + N + L + C +H + I +
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 692 ELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
L +D Y +L N+YA +WD +VR M+ GL+K PG S I
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 292/570 (51%), Gaps = 9/570 (1%)
Query: 1 MPLFRSCTN----LRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK 56
+ L R CTN LR++ +H +L GL D LI Y S+R VF+ F
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 57 -EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSG 114
D ++W L+ Y N+ F +++ ++ +++ + + F +P+V++A +LG G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 115 EKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDN 174
+H ++K G+ D V+ +S++ Y +F +++ +VFD+M RDV SW+++I+ ++ +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 175 ADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
+ + L++F M G EP+ V++ AC L L + IH +++ ++D +
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
++ + MY KC L A F K+ ++ +W +MI Y G + +E +M+
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
P+ TL ++L +C+ L GK +H +IR + + Y+ +LI+ Y +CG+ + E
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADI-YVNCSLIDLYFKCGEANLAET 365
Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
V + SWN++IS Y G +A+E+ QM + G+ PD + S L AC + +
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 415 LQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
L+ G QIH + + + DE + S+L+DMYSKCG + A+ +F I +K VV W MI
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKG-KWVHHKLISYGVRK 532
+ +G EA+ F +M L+ D VT L + AC + G +++G K+ YG+
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
I + + D+ + G L A + E
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 246/796 (30%), Positives = 389/796 (48%), Gaps = 63/796 (7%)
Query: 3 LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+F+ C L + HAH++++G L++ Y S+ +VFD D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 60 SFMWAVLIKCY-------MWNNFFE------------------------ESILLYHKMIR 88
W +I Y N+FF +SI ++ M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 89 EQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDD 148
E + +L+ CS L D G ++HG +++ G D D V +++L Y + +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLSLAEAC 206
+ +VF + ++ VSWS+IIA N +S LK F M V GV S+ +C
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA--SVLRSC 291
Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
L LR +H H L+ DG + + + MY+KC ++ A+ F E S+
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 267 AMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK 326
AMI+ Y++ KAL F +++ + I+L V +CA + L EG ++ I+
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS 411
Query: 327 GMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALEL 386
+ + + A I+ Y +C ++E +V + R+ +SWN +I+ + + G E L L
Sbjct: 412 SLSLDV-CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 387 LVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSK 445
V M + PD F+ S L AC GSL G++IH ++K + V SLIDMYSK
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 446 CGFKNLAYLLFERIQQKS--------------------VVMWNSMICGFYQNGNSLEAIN 485
CG A + R Q++ V WNS+I G+ S +A
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 486 LFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
LF +M + D+ T+ T + C+N+ GK +H ++I ++ D+YI + L DMY+
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649
Query: 546 KCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMN 605
KCGDL ++ +F+ R+ V+W+AMI Y HG+ +A LF++M+ IKPN VTF++
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 709
Query: 606 ILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
IL AC+H G +++G YF M R +G++P L HY+ MVD+L +SG ++ A ++I MPF
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 769
Query: 665 ANGSIWGALLNGCRIHK-RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKV 723
A+ IW LL C IH+ ++V + L D+ YTLLSN+YA+ G W++ +
Sbjct: 770 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829
Query: 724 RSIMEVTGLKKVPGYS 739
R M LKK PG S
Sbjct: 830 RRNMRGFKLKKEPGCS 845
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 171/652 (26%), Positives = 301/652 (46%), Gaps = 55/652 (8%)
Query: 83 YHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
+ + + ++S + V + C+ G L G++ H +I GF + +L Y
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 143 FGCLDDARKVFDKMT-------------------------------SRDVVSWSSIIASY 171
A VFDKM RDVVSW+S+++ Y
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG 231
N + + +++F M REG+E D T + + C L IHG V+R D
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
++ + MY+K + + R F I ++ + SW+A+I+ ++ AL+ F +M +V
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 292 KEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
+ +VL SCA L LR G +H ++ + + A ++ YA+C M +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD-GIVRTATLDMYAKCDNMQD 334
Query: 352 CEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
+ + N S+N +I+ Y+++ +AL L ++ + GL D S++ AC
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 412 VGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
V L GLQI+G IK D V ++ IDMY KC A+ +F+ ++++ V WN++
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGV 530
I QNG E + LF M + +E DE TF + ++AC+ G L G +H ++ G+
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM 513
Query: 531 RKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER-NV-------------------VSWSA 570
+ + +L DMY+KCG ++ A+++ +R NV VSW++
Sbjct: 514 ASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNS 573
Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFG 630
+I Y M Q DA LF +M++ GI P++ T+ +L C++ S GK +
Sbjct: 574 IISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE 633
Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKR 682
++ D+ + +VD+ S+ GD+ + +++ + W A++ G H +
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGK 684
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/699 (32%), Positives = 370/699 (52%), Gaps = 65/699 (9%)
Query: 97 IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
I P + C ++ + + +H +++ G + + + ++ TY GCL A + +
Sbjct: 30 ITPPFIHKCKTISQV---KLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRF 85
Query: 157 TSRD--VVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
D V W+S+I SY DN ++ L +F M PD T + +ACGE+ S+R
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
S H L + +GN+ + MYS+C L A + F ++ SW ++I Y +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 275 SGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
G + ALE F +M E P+ ITL+ VL CA LG GK +HC + M +
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNM 264
Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML----------------------- 370
++G L++ YA+CG M E V + ++++SWN +
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 371 ------------ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
IS YA++G+ EAL + QM + G+ P+ ++ S LS C +VG+L G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 419 LQIHGHVIK--IDCK------DEFVQSSLIDMYSKCGFKNLAYLLFERI--QQKSVVMWN 468
+IH + IK ID + + V + LIDMY+KC + A +F+ + +++ VV W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 469 SMICGFYQNGNSLEAINLFHQMYL-NC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
MI G+ Q+G++ +A+ L +M+ +C + T A+ AC+++ L GK +H
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH---- 500
Query: 527 SYGVRKD-----IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQL 581
+Y +R +++ L DMYAKCG + A+ VFD+M +N V+W++++ YGMHG
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 582 NDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYAC 640
+A +F +M G K + VT + +L+ACSHSG +++G YFN M+ +FGV P +HYAC
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC 620
Query: 641 MVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTND 700
+VDLL R+G + A ++I MP +W A L+ CRIH ++++ + ++++ +N
Sbjct: 621 LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNH 680
Query: 701 NGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
+G YTLLSN+YA G W + ++RS+M G+KK PG S
Sbjct: 681 DGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCS 719
Score = 275 bits (704), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 180/633 (28%), Positives = 311/633 (49%), Gaps = 55/633 (8%)
Query: 2 PLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS- 60
P C + ++ +H LL G+ ++ LI +Y +G L + + F D+
Sbjct: 33 PFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAG 91
Query: 61 -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
+ W LI+ Y N + + L+ M T N+ +P V +AC + + GE H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
+ GF + + +++ Y L DARKVFD+M+ DVVSW+SII SY
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 180 GLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
L+MF M E G PD +T++++ C L + + +H + ++ + +GN +
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK------ 292
MY+KCG + A F + + SW AM++ Y++ G F+ A+ F KM E K
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 293 -----------------------------EEPNLITLITVLGSCAGLGWLREGKSVHCQI 323
+PN +TLI+VL CA +G L GK +HC
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 324 I-------RKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEY 374
I + G G E + + LI+ YA+C K+ + ++ ER++++W ++I Y
Sbjct: 392 IKYPIDLRKNGHGDE-NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 375 ARKGMSKEALELLVQM--QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDC 430
++ G + +ALELL +M + P++F+++ +L AC ++ +L++G QIH + ++ +
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 431 KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQM 490
FV + LIDMY+KCG + A L+F+ + K+ V W S++ G+ +G EA+ +F +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 491 YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGD 549
++D VT L + ACS+ G +++G +++ + +GV L D+ + G
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 550 LQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
L A R+ + M E V W A + C +HG++
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/708 (31%), Positives = 378/708 (53%), Gaps = 14/708 (1%)
Query: 43 GSLRSSRL-----VFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI 97
G++ SSRL +FD D + L+ + + +E+ L+ + R + I
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 98 YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
+ SVL+ ++L D G ++H + IK GF D + TS++ TY + D RKVFD+M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARS 217
R+VV+W+++I+ Y N+ E L +F M EG +P+ T + E
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 218 IHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGW 277
+H V++ + P+ NS I +Y KCG++ A F K E + +W +MIS Y +G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 278 FQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGP 337
+AL F M + + +V+ CA L LR + +HC +++ G + + +
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN-IRT 334
Query: 338 ALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLM 396
AL+ Y++C M + ++ IG N++SW +IS + + +EA++L +M+ G+
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 397 PDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLL 455
P+ F+ + L+A + + +H V+K + + V ++L+D Y K G A +
Sbjct: 395 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 456 FERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI-GQ 514
F I K +V W++M+ G+ Q G + AI +F ++ ++ +E TF + + C+
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
+ +GK H I + + + +AL MYAK G++++A+ VF E+++VSW++MI
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFGVEP 633
Y HGQ A +FK+M +K + VTF+ + AC+H+G VEEG+ YF+ M R + P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 634 DLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKEL 693
+H +CMVDL SR+G +E A K+I +MP PA +IW +L CR+HK+ ++ + +++
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 694 SVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
D+ Y LLSN+YAE G+W E KVR +M +KK PGYS I
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 258 bits (660), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 183/642 (28%), Positives = 309/642 (48%), Gaps = 48/642 (7%)
Query: 15 RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
+LH + G D T L+++Y + + + R VFD KE + W LI Y N+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 75 FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
+E + L+ +M E ++F + + L + G G G +VH ++K G DK +
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
S++ Y + G + AR +FDK + VV+W+S+I+ Y N E L MF+SM V
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
+ S+ + C L LR +H V++ D + + +V YSKC +L A R F
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 255 VKIEKRC---TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
+I C SWTAMIS + ++ ++A++ F +M PN T +L + +
Sbjct: 354 KEIG--CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
VH Q+++ +G AL++ Y + GK+ E KV I +++I++W+ ++
Sbjct: 412 ----PSEVHAQVVKTNY-ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNV-GSLQLGLQIHGHVIKIDC 430
+ YA+ G ++ A+++ ++ G+ P+ F+ +S L+ C S+ G Q HG IK
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 431 KDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
V S+L+ MY+K G A +F+R ++K +V WNSMI G+ Q+G +++A+++F +
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGD 549
M ++MD VTF+ AC++ G +E+G + Y D + D C
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEG--------------EKYFDIMVRD----CKI 628
Query: 550 LQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWA 609
T E N S M+D Y GQL A + + M + + IL A
Sbjct: 629 APT--------KEHN----SCMVDLYSRAGQLEKAMKVIENMPNPA---GSTIWRTILAA 673
Query: 610 CSHSGSVEEGKFYFNAMRIFGVEP-DLQHYACMVDLLSRSGD 650
C E G+ A +I ++P D Y + ++ + SGD
Sbjct: 674 CRVHKKTELGR--LAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 152/353 (43%), Gaps = 38/353 (10%)
Query: 14 TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWN 73
+ +HA ++ T T L+++Y ++G + + VF + D W+ ++ Y
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 74 NFFEESILLYHKMIREQATISNFIYPSVLRACSSL-GDLGSGEKVHGRIIKCGFDKDDVI 132
E +I ++ ++ + + F + S+L C++ +G G++ HG IK D +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
+++L Y + G ++ A +VF + +D+VSW+S+I+ Y + + L +F M + V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 193 EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAER 252
+ D VT + + AC H ++ K F +M C + E
Sbjct: 593 KMDGVTFIGVFAAC-----------THAGLVEEGEKY-------FDIMVRDCKIAPTKEH 634
Query: 253 TFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL-ITVLGSCAGLG 311
+ M+ Y+R+G +KA+ K++E P T+ T+L +C
Sbjct: 635 N------------SCMVDLYSRAGQLEKAM----KVIENMPNPAGSTIWRTILAACRVHK 678
Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
G+ +II M PE L YAE G E KV + ERN+
Sbjct: 679 KTELGRLAAEKII--AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 729
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/757 (31%), Positives = 397/757 (52%), Gaps = 20/757 (2%)
Query: 3 LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP- 58
L ++C+ L L+ +H ++V G YDP +T L+ Y + G L + VFD + +
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQ 125
Query: 59 ------DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDL- 111
D +W +I Y F+E + + +M+ F V+ G+
Sbjct: 126 SGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFR 185
Query: 112 -GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIA 169
G+++HG +++ D D ++T+++ Y +FG DA +VF ++ + +VV W+ +I
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 170 SYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKI 229
+ + L ++ V+ + AC + + R IH V++ +
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 230 DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML 289
D + S + MYSKCG + AE F + + W AM++ Y + + AL+ F M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 290 EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKM 349
+ P+ TL V+ C+ LG GKSVH ++ ++ + + AL+ Y++CG
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPI-QSTSTIESALLTLYSKCGCD 424
Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW--GLMPDSFSVASSLS 407
+ V ++ E+++++W LIS + G KEAL++ M+ L PDS + S +
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 408 ACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVM 466
AC + +L+ GLQ+HG +IK + FV SSLID+YSKCG +A +F + +++V
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 467 WNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
WNSMI + +N +I+LF+ M + D V+ + + A S+ L KGK +H +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAAS 586
G+ D ++ AL DMY KCG + A+ +F M +++++W+ MI YG HG A S
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 587 LFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLL 645
LF +M +G P++VTF++++ AC+HSG VEEGK F M+ +G+EP+++HYA MVDLL
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 646 SRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYY 704
R+G +E A+ I +MP A+ SIW LL+ R H +++ + + EK L + + Y
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784
Query: 705 TLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
L+ N+Y E G +E K+ +M+ GL K PG S I
Sbjct: 785 QLI-NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Score = 285 bits (730), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 299/571 (52%), Gaps = 18/571 (3%)
Query: 94 SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
S F +PS+L+ACS+L +L G+ +HG ++ G+ D I TS++ Y + G LD A +VF
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 154 D-------KMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD-FVTMLSLAEA 205
D +++RDV W+S+I YF EG+ F M+ GV PD F + ++
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 206 CGELCSLR-PARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS 264
C E R + IHG +LR + D L + I MY K G + A R FV+IE +
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 265 -WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI--TLITVLGSCAGLGWLREGKSVHC 321
W MI + SG + +L+ + ML L+ + LG+C+ G+ +HC
Sbjct: 239 LWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296
Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
+++ G+ + Y+ +L+ Y++CG + E E V + ++ + WN +++ YA
Sbjct: 297 DVVKMGLHND-PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLI 440
AL+L M+ ++PDSF++++ +S C +G G +H + K + ++S+L+
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMD 498
+YSKCG AYL+F+ +++K +V W S+I G +NG EA+ +F M + L+ D
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 499 EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD 558
+ AC+ + L G VH +I G+ ++++ ++L D+Y+KCG + A +VF
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT 535
Query: 559 SMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
SMS N+V+W++MI CY + + LF ML GI P+ V+ ++L A S + S+ +
Sbjct: 536 SMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 619 GKFYFNAMRIFGVEPDLQHYACMVDLLSRSG 649
GK G+ D ++D+ + G
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 10/219 (4%)
Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV-TFLTAIQACSNIGQLEKGKWVHHKLI 526
NS I Q G L+A++L+ + + V TF + ++ACS + L GK +H ++
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 527 SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFD-------SMSERNVVSWSAMIDCYGMHG 579
G R D +I T+L +MY KCG L A +VFD +S R+V W++MID Y
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSV--EEGKFYFNAMRIFGVEPDLQH 637
+ + F++ML G++P+ + ++ G+ EEGK M ++ D
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 638 YACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
++D+ + G A+++ + +N +W ++ G
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/600 (34%), Positives = 336/600 (56%), Gaps = 9/600 (1%)
Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
+F DAR++F +MT R + W++++ S E L F M R+ +PD T+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPL--GNSFIVMYSKCGDLLSAERTFVKIEK 259
+ACGEL + IHG V ++ + + L G+S I MY KCG ++ A R F ++EK
Sbjct: 66 ALKACGELREVNYGEMIHGFV-KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 260 RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKS 318
+W++M+S + ++G +A+E F +M+ + P+ +TLIT++ +C L R G+
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 319 VHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKG 378
VH +IR+G + + +L+ YA+ E + I E++++SW+ +I+ Y + G
Sbjct: 185 VHGFVIRRGFSNDLSLVN-SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 379 MSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQS 437
+ EAL + M G P+ +V L AC L+ G + H I+ + E V +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 438 SLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL-NCLE 496
+L+DMY KC AY +F RI +K VV W ++I GF NG + +I F M L N
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
D + + + +CS +G LE+ K H +I YG + +I +L ++Y++CG L A +V
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGS 615
F+ ++ ++ V W+++I YG+HG+ A F M+ S +KPNEVTF++IL ACSH+G
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 483
Query: 616 VEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALL 674
+ EG F M + + P+L+HYA +VDLL R GD++ A ++ MPF I G LL
Sbjct: 484 IHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLL 543
Query: 675 NGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKK 734
CRIH+ ++ +T+ K+L +N GYY L+SN+Y +G W+ K+R+ ++ G+KK
Sbjct: 544 GACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 603
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 270/522 (51%), Gaps = 13/522 (2%)
Query: 48 SRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSS 107
+R +F + + W L+K +EE + + M R++ NF P L+AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 108 LGDLGSGEKVHGRIIK-CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSS 166
L ++ GE +HG + K D + +S++ Y + G + +A ++FD++ D+V+WSS
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 167 IIASYFDNADVSEGLKMFHSMV-REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
+++ + N + ++ F MV V PD VT+++L AC +L + R R +HG V+RR
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESF 285
D L NS + Y+K A F I ++ SW+ +I+CY ++G +AL F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 286 VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAE 345
M++ EPN+ T++ VL +CA L +G+ H IRKG+ E + AL++ Y +
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK-VSTALVDMYMK 311
Query: 346 CGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE----LLVQMQTWGLMPDSFS 401
C E V I ++++SW LIS + GM+ ++E +L++ T PD+
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT---RPDAIL 368
Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
+ L +C +G L+ H +VIK + F+ +SL+++YS+CG A +F I
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLEKGK 519
K V+W S+I G+ +G +A+ F+ M + ++ +EVTFL+ + ACS+ G + +G
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 520 WVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
+ +++ Y + ++ L D+ + GDL TA + M
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 231/469 (49%), Gaps = 17/469 (3%)
Query: 28 DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
D + LI Y + G + + +FD ++PD W+ ++ + N +++ + +M+
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 88 -REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCL 146
T +++ AC+ L + G VHG +I+ GF D + S+L Y +
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 147 DDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
+A +F + +DV+SWS++IA Y N +E L +F+ M+ +G EP+ T+L + +AC
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274
Query: 207 GELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
L R H +R+ ++ + + + + MY KC A F +I ++ SW
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 334
Query: 267 AMISCYNRSGWFQKALESF-VKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
A+IS + +G +++E F + +LE P+ I ++ VLGSC+ LG+L + K H +I+
Sbjct: 335 ALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK 394
Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
G ++G +L+E Y+ CG + KV + I ++ + W LI+ Y G +ALE
Sbjct: 395 YGFDSN-PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 453
Query: 386 LLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSS------ 438
M ++ + P+ + S LSAC + G + GL+I K+ D + +
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FKLMVNDYRLAPNLEHYAV 509
Query: 439 LIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNGNSLEAI 484
L+D+ + G + A + +R+ + + +++ C +QNG E +
Sbjct: 510 LVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 558
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 166/321 (51%), Gaps = 5/321 (1%)
Query: 1 MPLFRSCTNLR--KLTR-LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
+ L +CT L +L R +H ++ G D L+ YA+ + + + +F E
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE 226
Query: 58 PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
D W+ +I CY+ N E++L+++ M+ + + VL+AC++ DL G K
Sbjct: 227 KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT 286
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
H I+ G + + + T+++ Y + ++A VF ++ +DVVSW ++I+ + N
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 178 SEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNS 236
++ F M+ E PD + M+ + +C EL L A+ H +V++ + +G S
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 237 FIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EP 295
+ +YS+CG L +A + F I + T WT++I+ Y G KALE+F M++ E +P
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 296 NLITLITVLGSCAGLGWLREG 316
N +T +++L +C+ G + EG
Sbjct: 467 NEVTFLSILSACSHAGLIHEG 487
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/681 (31%), Positives = 361/681 (53%), Gaps = 12/681 (1%)
Query: 66 LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACS-SLGDLG-SGEKVHGRIIK 123
L+K + I ++ ++R T ++F L+A + S E+V + K
Sbjct: 19 LLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTK 78
Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKM 183
G D+ ++TS+L Y + GC+ A+ +FD+M RD V W+++I Y N + K+
Sbjct: 79 SGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKL 138
Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
F M+++G P T+++L CG+ + RS+HG + +++D + N+ I YSK
Sbjct: 139 FIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSK 198
Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
C +L SAE F +++ + T SW MI Y++SG ++A+ F M E E + +T+I +
Sbjct: 199 CAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL 258
Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
L + + +HC +++ GM + + +L+ Y+ CG + E++ + + +
Sbjct: 259 LSAHV------SHEPLHCLVVKCGMVNDISVV-TSLVCAYSRCGCLVSAERLYASAKQDS 311
Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
I+ ++S YA KG A+ + + + D+ ++ L C + +G+ +HG
Sbjct: 312 IVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHG 371
Query: 424 HVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
+ IK C V + LI MYSK LFE++Q+ ++ WNS+I G Q+G +
Sbjct: 372 YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAST 431
Query: 483 AINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
A +FHQM L L D +T + + CS + L GK +H + + ++ TAL
Sbjct: 432 AFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALI 491
Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEV 601
DMYAKCG+ A+ VF S+ +W++MI Y + G + A S + +M + G+KP+E+
Sbjct: 492 DMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEI 551
Query: 602 TFMNILWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHS 660
TF+ +L AC+H G V+EGK F AM + FG+ P LQHYA MV LL R+ A +I
Sbjct: 552 TFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWK 611
Query: 661 MPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEF 720
M + ++WGALL+ C IH+ ++V + + +++ + + G Y L+SN+YA E WD+
Sbjct: 612 MDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDV 671
Query: 721 GKVRSIMEVTGLKKVPGYSTI 741
+VR++M+ G G S I
Sbjct: 672 VRVRNMMKDNGYDGYLGVSQI 692
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 266/517 (51%), Gaps = 9/517 (1%)
Query: 12 KLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYM 71
++ ++ HL +GL T L+ Y + G + S++++FD E D+ +W LI Y
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 72 WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
N + ++ L+ M+++ + S ++L C G + G VHG K G + D
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
++ +++ Y + L A +F +M + VSW+++I +Y + E + +F +M +
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
VE VT+++L A S P +H V++ + D + S + YS+CG L+SAE
Sbjct: 248 VEISPVTIINLLSA---HVSHEP---LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
R + ++ T+++SCY G A+ F K ++ + + + L+ +L C
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
+ G S+H I+ G+ + + LI Y++ + + + E ++SWN +I
Sbjct: 362 HIDIGMSLHGYAIKSGLCTK-TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVI 420
Query: 372 SEYARKGMSKEALELLVQMQ-TWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC 430
S + G + A E+ QM T GL+PD+ ++AS L+ C + L LG ++HG+ ++ +
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF 480
Query: 431 KDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
++E FV ++LIDMY+KCG + A +F+ I+ WNSMI G+ +G A++ + +
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLE 540
Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI 526
M L+ DE+TFL + AC++ G +++GK +I
Sbjct: 541 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMI 577
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 365 bits (936), Expect = e-99, Method: Compositional matrix adjust.
Identities = 222/730 (30%), Positives = 387/730 (53%), Gaps = 16/730 (2%)
Query: 19 HLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEE 78
H + G + + LI+ +++ + VF + + W +I + N +
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA 234
Query: 79 SILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILC 138
L+H+M ++ Y SVL AC+SL L G+ V R+IKCG + D + T+I+
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVD 293
Query: 139 TYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVT 198
Y + G + +A +VF ++ + VVSW+ +++ Y + D L++F M GVE + T
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 199 MLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE 258
+ S+ ACG + A +H V + +D + + I MYSK GD+ +E+ F ++
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 259 K-RCTTSWTAMISCYNRSGWFQKALESFVKMLE---VKEEPNLITLITVLGSCAGLGWLR 314
+ MI+ +++S KA+ F +ML+ +E ++ +L++VL C LG
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-DCLNLG--- 469
Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEY 374
K VH ++ G+ + +G +L Y++CG + E K+ I ++ W +IS +
Sbjct: 470 --KQVHGYTLKSGLVLDLT-VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--IDCKD 432
G +EA+ L +M G PD ++A+ L+ C + SL G +IHG+ ++ ID K
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID-KG 585
Query: 433 EFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYL 492
+ S+L++MYSKCG LA +++R+ + V +S+I G+ Q+G + LF M +
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645
Query: 493 NCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT 552
+ MD + ++A + + G VH + G+ + + ++L MY+K G +
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Query: 553 AQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
+ F ++ ++++W+A+I Y HG+ N+A ++ M + G KP++VTF+ +L ACSH
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 613 SGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWG 671
G VEE F+ N+M + +G+EP+ +HY CMVD L RSG + A I++M + +WG
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825
Query: 672 ALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTG 731
LL C+IH +++ K K+ +D G Y LSNI AE G WDE + R +M+ TG
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTG 885
Query: 732 LKKVPGYSTI 741
++K PG+S++
Sbjct: 886 VQKEPGWSSV 895
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 204/681 (29%), Positives = 327/681 (48%), Gaps = 13/681 (1%)
Query: 9 NLRKLTRLHAHLLVTGL-HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
NLR L AHLL L +D + L+ Y+ GS+ + +FDT +PD ++I
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 68 KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
Y + FEES+ + KM + Y SV+ ACS+L E V IK G+
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 128 KDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM 187
+V++++++ + + +DA KVF S +V W++IIA N + +FH M
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 188 VREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDL 247
+PD T S+ AC L LR + + V++ + D + + + +Y+KCG +
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHM 301
Query: 248 LSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSC 307
A F +I SWT M+S Y +S ALE F +M E N T+ +V+ +C
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 308 AGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKV---IHAIGERNI 364
+ E VH + + G + + ALI Y++ G + E+V + I +NI
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLD-SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 365 LSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGH 424
+ N++I+ +++ +A+ L +M GL D FSV S LS + L LG Q+HG+
Sbjct: 421 V--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGY 475
Query: 425 VIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
+K D V SSL +YSKCG +Y LF+ I K W SMI GF + G EA
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
I LF +M + DE T + CS+ L +GK +H + G+ K + + +AL +M
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 544 YAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTF 603
Y+KCG L+ A++V+D + E + VS S++I Y HG + D LF+ M+ SG +
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 604 MNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPF 663
+IL A + S G + G+ + + ++ + S+ G I+ K +
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING 715
Query: 664 PANGSIWGALLNGCRIHKRID 684
P + W AL+ H + +
Sbjct: 716 P-DLIAWTALIASYAQHGKAN 735
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 231/472 (48%), Gaps = 11/472 (2%)
Query: 209 LCSLRPARSIHGHVLRRK-IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
LC+LR + + H+LRR + D L S + YS G + A + F I + S
Sbjct: 61 LCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNI 120
Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
MIS Y + F+++L F KM + E N I+ +V+ +C+ L + V C I+ G
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180
Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
Y+ + ALI+ +++ + + KV N+ WN +I+ R +L
Sbjct: 181 YF-FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239
Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
+M PDS++ +S L+AC ++ L+ G + VIK +D FV ++++D+Y+KCG
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCG 299
Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
A +F RI SVV W M+ G+ ++ ++ A+ +F +M + +E++ T + I
Sbjct: 300 HMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVF---DSMSERN 564
AC + + VH + G D + AL MY+K GD+ +++VF D + +N
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
+V + MI + + A LF +ML G++ +E + ++L S + GK
Sbjct: 420 IV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHG 474
Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
G+ DL + + L S+ G +E ++K+ +PF N + W ++++G
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISG 525
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 188/389 (48%), Gaps = 12/389 (3%)
Query: 7 CTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVL 66
C NL K ++H + L +GL D + L Y++ GSL S +F D+ WA +
Sbjct: 465 CLNLGK--QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASM 522
Query: 67 IKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF 126
I + + E+I L+ +M+ + + +VL CSS L G+++HG ++ G
Sbjct: 523 ISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGI 582
Query: 127 DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
DK + ++++ Y + G L AR+V+D++ D VS SS+I+ Y + + +G +F
Sbjct: 583 DKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRD 642
Query: 187 MVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGD 246
MV G D + S+ +A +H ++ + + + +G+S + MYSK G
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGS 306
+ + F +I +WTA+I+ Y + G +AL+ + M E +P+ +T + VL +
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762
Query: 307 CAGLGWLREGK-SVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG-ERNI 364
C+ G + E ++ + G+ PE + +++ G++ E E I+ + + +
Sbjct: 763 CSHGGLVEESYFHLNSMVKDYGIEPENRHY-VCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 365 LSWNMLISEYARKG-------MSKEALEL 386
L W L++ G +K+A+EL
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIEL 850
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/647 (32%), Positives = 354/647 (54%), Gaps = 16/647 (2%)
Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 159
++ R C+ +L S + +H R++ ++ I ++ Y G + AR FD + +R
Sbjct: 59 TLFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 160 DVVSWSSIIASYFDNADVSEGLKMFH-SMVREGVEPDFVTMLSLAEACGELCSLRPARSI 218
DV +W+ +I+ Y + SE ++ F M+ G+ PD+ T S+ +AC + I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 219 HGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWF 278
H L+ D + S I +YS+ + +A F ++ R SW AMIS Y +SG
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 279 QKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPA 338
++AL + L + +T++++L +C G G ++H I+ G+ E ++
Sbjct: 233 KEAL-TLSNGLRAMDS---VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL-FVSNK 287
Query: 339 LIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPD 398
LI+ YAE G++ +C+KV + R+++SWN +I Y A+ L +M+ + PD
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 399 SFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGFKNLAYLLF 456
++ S S +G ++ + G ++ +D + ++++ MY+K G + A +F
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQL 515
+ V+ WN++I G+ QNG + EAI +++ M + ++ T+++ + ACS G L
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 516 EKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCY 575
+G +H +L+ G+ D+++ T+L DMY KCG L+ A +F + N V W+ +I C+
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 527
Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPD 634
G HG A LFK+MLD G+KP+ +TF+ +L ACSHSG V+EG++ F M+ +G+ P
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELS 694
L+HY CMVD+ R+G +E A K I SM + SIWGALL+ CR+H +D+ K + L
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 647
Query: 695 VTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
GY+ LLSN+YA G W+ ++RSI GL+K PG+S++
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/610 (28%), Positives = 316/610 (51%), Gaps = 14/610 (2%)
Query: 3 LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
LFR CTNL+ LHA L+V+ + S +L+ Y +G++ +R FD + D +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIREQATISNF-IYPSVLRACSSLGDLGSGEKVHGRI 121
W ++I Y E I + + ++ +PSVL+AC ++ D G K+H
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176
Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
+K GF D + S++ Y + + +AR +FD+M RD+ SW+++I+ Y + + E L
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
+ + + D VT++SL AC E +IH + ++ ++ + + N I +Y
Sbjct: 237 TLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
++ G L ++ F ++ R SW ++I Y + +A+ F +M + +P+ +TLI
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
++ + LG +R +SV +RKG E +G A++ YA+ G + V + +
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQ 420
+++SWN +IS YA+ G + EA+E+ M+ G + + + S L AC G+L+ G++
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 421 IHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGN 479
+HG ++K D FV +SL DMY KCG A LF +I + + V WN++I +G+
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532
Query: 480 SLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRKDIYIDT 538
+A+ LF +M ++ D +TF+T + ACS+ G +++G+W + YG+ +
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592
Query: 539 ALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
+ DMY + G L+TA + SMS + + W A++ +HG ++ + + + ++
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE--VE 650
Query: 598 PNEVTFMNIL 607
P V + +L
Sbjct: 651 PEHVGYHVLL 660
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
+P LR+ +LH LL GL+ D T L + Y + G L + +F +S
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
W LI C+ ++ E++++L+ +M+ E + + ++L ACS G + G+
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 121 I-IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR-DVVSWSSIIASYFDNADVS 178
+ G ++ YG G L+ A K M+ + D W +++++ + +V
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Query: 179 EGLKMFHSMVREGVEPDFV---TMLS-LAEACGELCSLRPARSI-HGHVLRR 225
G K+ + E VEP+ V +LS + + G+ + RSI HG LR+
Sbjct: 638 LG-KIASEHLFE-VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 306/529 (57%), Gaps = 4/529 (0%)
Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
+ IH +L ++ G L I S GD+ A + F + + W A+I Y+R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
FQ AL + M + P+ T +L +C+GL L+ G+ VH Q+ R G + ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV-FV 156
Query: 336 GPALIEFYAECGKMSECEKVIHAIG--ERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
LI YA+C ++ V + ER I+SW ++S YA+ G EALE+ QM+
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLA 452
+ PD ++ S L+A + L+ G IH V+K+ + E + SL MY+KCG A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
+LF++++ ++++WN+MI G+ +NG + EAI++FH+M + D ++ +AI AC+ +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 513 GQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMI 572
G LE+ + ++ + R D++I +AL DM+AKCG ++ A+ VFD +R+VV WSAMI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 573 DCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVE 632
YG+HG+ +A SL++ M G+ PN+VTF+ +L AC+HSG V EG ++FN M +
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN 456
Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
P QHYAC++DLL R+G ++ A+++I MP ++WGALL+ C+ H+ +++ + ++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
L ++ G+Y LSN+YA WD +VR M+ GL K G S +
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/568 (27%), Positives = 284/568 (50%), Gaps = 50/568 (8%)
Query: 3 LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
L S T+ +L ++HA LLV GL + T+LI + + G + +R VFD P F
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
W +I+ Y NN F++++L+Y M + + +F +P +L+ACS L L G VH ++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFD--KMTSRDVVSWSSIIASYFDNADVSEG 180
+ GFD D +Q ++ Y + L AR VF+ + R +VSW++I+++Y N + E
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
L++F M + V+PD+V ++S+ A L L+ RSIH V++ ++I+ L S M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
Y+KCG + +A+ F K++ W AMIS Y ++G+ ++A++ F +M+ P+ I++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
+ + +CA +G L + +S++ + R + ++ ALI+ +A+CG + V
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDV-FISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
+R+++ W+ +I Y G ++EA+ L M+ G+ P+ + L AC + G ++ G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 421 IHGHVI--KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQN 477
+ KI+ + + + +ID+ + G + AY + + + Q V +W ++
Sbjct: 446 FFNRMADHKINPQQQHY-ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL------- 497
Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
+ AC +E G++ +L S ID
Sbjct: 498 ----------------------------LSACKKHRHVELGEYAAQQLFS--------ID 521
Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNV 565
+ T Y + +L A R++D ++E V
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRV 549
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 212/682 (31%), Positives = 365/682 (53%), Gaps = 43/682 (6%)
Query: 99 PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSIL---CTYGEFGCLDDARKVFDK 155
PS L+ C ++ +L + H + K G D D T ++ C G L A++VF+
Sbjct: 36 PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 156 MTSRDV-VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
S ++S+I Y + +E + +F M+ G+ PD T AC + +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
IHG +++ D + NS + Y++CG+L SA + F ++ +R SWT+MI Y R
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 275 SGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYD 333
+ + A++ F +M+ +E PN +T++ V+ +CA L L G+ V+ I G+ D
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN-D 271
Query: 334 YLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTW 393
+ AL++ Y +C + +++ G N+ N + S Y R+G+++EAL + M
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 394 GLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKD-EFVQSSLIDMYSKCGFKNLA 452
G+ PD S+ S++S+C + ++ G HG+V++ + + + ++LIDMY KC ++ A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 453 YLLFERIQQKSVVMWNSMICGFYQNG--------------------NSL----------- 481
+ +F+R+ K+VV WNS++ G+ +NG N++
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 482 EAINLFHQMY-LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
EAI +F M + D VT ++ AC ++G L+ KW+++ + G++ D+ + T L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 541 TDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNE 600
DM+++CGD ++A +F+S++ R+V +W+A I M G A LF M++ G+KP+
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 601 VTFMNILWACSHSGSVEEGK-FYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
V F+ L ACSH G V++GK +++ +++ GV P+ HY CMVDLL R+G +E A ++I
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
MP N IW +LL CR+ +++ +++ V G Y LLSN+YA G W++
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
KVR M+ GL+K PG S+I
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSI 713
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/671 (27%), Positives = 324/671 (48%), Gaps = 80/671 (11%)
Query: 4 FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS--- 60
++C + +L H L GL D T+L+ E+G+ S + F+ +S
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 61 -FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
FM+ LI+ Y + E+ILL+ +M+ + + +P L AC+ G+G ++HG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
I+K G+ KD +Q S++ Y E G LD ARKVFD+M+ R+VVSW+S+I Y +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 180 GLKMFHSMVR-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
+ +F MVR E V P+ VTM+ + AC +L L ++ + I+++ + ++ +
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
MY KC + A+R F + AM S Y R G ++AL F M++ P+ I
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC------------ 346
++++ + SC+ L + GKS H ++R G +D + ALI+ Y +C
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 347 -------------------GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
G++ + + E+NI+SWN +IS + + +EA+E+
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 388 VQMQTW-GLMPDSFSVASSLSACGNVGSLQLGLQIHGHV----IKIDCKDEFVQSSLIDM 442
MQ+ G+ D ++ S SACG++G+L L I+ ++ I++D + + ++L+DM
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR---LGTTLVDM 514
Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
+S+CG A +F + + V W + I GN+ AI LF M L+ D V F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
+ A+ ACS+ G +++GK + + ++ +GV + D++ C
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPE--------DVHYGC-------------- 612
Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
M+D G G L +A L + M ++PN+V + ++L AC G+VE +
Sbjct: 613 ---------MVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAAY 660
Query: 622 YFNAMRIFGVE 632
+++ E
Sbjct: 661 AAEKIQVLAPE 671
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 358 bits (920), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 218/746 (29%), Positives = 385/746 (51%), Gaps = 38/746 (5%)
Query: 3 LFRSCTNLRKLT---RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
+ + C R L+ ++HA +L G Y + T+L+ YA+ +L + ++F +
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV 135
Query: 58 PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
+ F WA +I E +++ + +M+ + NF+ P+V +AC +L G V
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
HG ++K G + + +S+ YG+ G LDDA KVFD++ R+ V+W++++ Y N
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255
Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
E +++F M ++GVEP VT+ + A + + + H + +++D LG S
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSL 315
Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
+ Y K G + AE F ++ ++ +W +IS Y + G + A+ M K + +
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
+TL T++ + A L+ GK V C IR + L +++ YA+CG + + +KV
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI-VLASTVMDMYAKCGSIVDAKKVFD 434
Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
+ E++++ WN L++ YA G+S EAL L MQ G+ P+ + + L
Sbjct: 435 STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT----------WNLIIL 484
Query: 418 GLQIHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
L +G V + KD F+Q M S NL + W +M+ G QN
Sbjct: 485 SLLRNGQV--DEAKDMFLQ-----MQSSGIIPNL-------------ISWTTMMNGMVQN 524
Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD-IYI 536
G S EAI +M + L + + A+ AC+++ L G+ +H +I + I
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
+T+L DMYAKCGD+ A++VF S + +AMI Y ++G L +A +L++ + G+
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGL 644
Query: 597 KPNEVTFMNILWACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAF 655
KP+ +T N+L AC+H+G + + + + + + ++P L+HY MVDLL+ +G+ E A
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704
Query: 656 KMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEG 715
++I MPF + + +L+ C ++ +++ + ++L + ++G Y +SN YA EG
Sbjct: 705 RLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764
Query: 716 NWDEFGKVRSIMEVTGLKKVPGYSTI 741
+WDE K+R +M+ GLKK PG S I
Sbjct: 765 SWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 4/309 (1%)
Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK--- 427
+S + G KEAL L+ +M L L C L G QIH ++K
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 428 IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLF 487
++E++++ L+ Y+KC +A +LF +++ ++V W ++I + G A+ F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 488 HQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
+M N + D +AC + G+ VH ++ G+ +++ ++L DMY KC
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
G L A +VFD + +RN V+W+A++ Y +G+ +A LF M G++P VT L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
A ++ G VEEGK + G+E D +++ + G IE A +M+ F +
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA-EMVFDRMFEKDV 340
Query: 668 SIWGALLNG 676
W +++G
Sbjct: 341 VTWNLIISG 349
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 3/222 (1%)
Query: 457 ERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLE 516
E+ S + + +NG EA++L +M L + + +Q C L
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 517 KGKWVHHKLISYG--VRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDC 574
GK +H +++ G ++ YI+T L YAKC L+ A+ +F + RNV SW+A+I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 575 YGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD 634
G A F +ML++ I P+ N+ AC G+ + G+E
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 635 LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
+ + + D+ + G ++ A K+ +P N W AL+ G
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVG 248
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 227/769 (29%), Positives = 387/769 (50%), Gaps = 81/769 (10%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI--KCYM-- 71
+H ++ G+ D RL++ Y E G +R VFD D + W + +C +
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87
Query: 72 ------------------WNN---------FFEESILLYHKMIREQATISNFIYPSVLRA 104
WNN F E+++++Y +M+ + S F SVL A
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 105 CSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDARKVFDKMTSRDVVS 163
CS + D G + HG +K G DK+ + ++L Y + G +D +VF+ ++ + VS
Sbjct: 148 CSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVS 207
Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFV---TMLSLA---EACGELCSL---RP 214
++++I V E ++MF M +GV+ D V +LS++ E C L +
Sbjct: 208 YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNEL 267
Query: 215 ARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNR 274
+ IH LR D L NS + +Y+K D+ AE F ++ + SW MI + +
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDY 334
K++E +M + +PN +T I+VLG+C G + G+
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR----------------- 370
Query: 335 LGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWG 394
++ +I + ++ +WN ++S Y+ +EA+ QMQ
Sbjct: 371 -------------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 395 LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAY 453
L PD +++ LS+C + L+ G QIHG VI+ + K+ + S LI +YS+C ++
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471
Query: 454 LLFER-IQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNC-LEMDEVTFLTAIQACSN 511
+F+ I + + WNSMI GF N +A+ LF +M+ L +E +F T + +CS
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 512 IGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAM 571
+ L G+ H ++ G D +++TALTDMY KCG++ +A++ FD++ +N V W+ M
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591
Query: 572 IDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIFG 630
I YG +G+ ++A L+++M+ SG KP+ +TF+++L ACSHSG VE G ++M RI G
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 631 VEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIE 690
+EP+L HY C+VD L R+G +E A K+ + P+ ++ +W LL+ CR+H + + + +
Sbjct: 652 IEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVA 711
Query: 691 KELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
++L + Y LLSN Y+ WD+ ++ +M + K PG S
Sbjct: 712 EKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 159/633 (25%), Positives = 288/633 (45%), Gaps = 79/633 (12%)
Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
SG+ +HG I++ G D + +L Y E G D ARKVFD+M+ RDV SW++ +
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 173 DNADVSEGLKMFHSM---------------VREGVE----------------PDFVTMLS 201
D+ E ++F M VR+G E P T+ S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS-AERTFVKIEKR 260
+ AC ++ HG ++ + + +GN+ + MY+KCG ++ R F + +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 261 CTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA---GLGWLRE-- 315
S+TA+I R +A++ F M E + + + L +L A G L E
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 316 ----GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
GK +HC +R G G + +L +L+E YA+ M+ E + + E N++SWN++I
Sbjct: 264 GNELGKQIHCLALRLGFGGDL-HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
+ ++ S +++E L +M+ G P+ + S L AC G ++ G +I
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI---------- 372
Query: 432 DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY 491
F I Q SV WN+M+ G+ + EAI+ F QM
Sbjct: 373 ------------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 492 LNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQ 551
L+ D+ T + +C+ + LE GK +H +I + K+ +I + L +Y++C ++
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 552 TAQRVFDS-MSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWA 609
++ +FD ++E ++ W++MI + + A LF++M + + PNE +F +L +
Sbjct: 469 ISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 610 CSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI 669
CS S+ G+ + + G D + D+ + G+I+ A + ++ N I
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVI 587
Query: 670 WGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
W +++G + R D + +++ +G +G
Sbjct: 588 WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 620
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 180/416 (43%), Gaps = 38/416 (9%)
Query: 15 RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
++H L G D + L+E YA+ + + L+F E + W ++I +
Sbjct: 270 QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEY 329
Query: 75 FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
++S+ +M + SVL AC GD+ +G
Sbjct: 330 RSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG-------------------- 369
Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
R++F + V +W+++++ Y + E + F M + ++P
Sbjct: 370 ---------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKP 414
Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
D T+ + +C L L + IHG V+R +I + + + I +YS+C + +E F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 255 VK-IEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE-PNLITLITVLGSCAGLGW 312
I + W +MIS + + KAL F +M + PN + TVL SC+ L
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
L G+ H +++ G + ++ AL + Y +CG++ + A+ +N + WN +I
Sbjct: 535 LLHGRQFHGLVVKSGYVSD-SFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 593
Query: 373 EYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
Y G EA+ L +M + G PD + S L+AC + G ++ GL+I + +I
Sbjct: 594 GYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 649
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 179/376 (47%), Gaps = 15/376 (3%)
Query: 4 FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
+RS ++ LTR+ +G + ++ + G + + R +F + +P W
Sbjct: 329 YRSDKSVEFLTRMRD----SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAW 384
Query: 64 AVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIK 123
++ Y +EE+I + +M + +L +C+ L L G+++HG +I+
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 124 CGFDKDDVIQTSILCTYGEFGCLDDARKVFDK-MTSRDVVSWSSIIASYFDNADVSEGLK 182
K+ I + ++ Y E ++ + +FD + D+ W+S+I+ + N ++ L
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 183 MFHSMVREGV----EPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
+F M + V E F T+LS +C LCSL R HG V++ D + +
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLS---SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 561
Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
MY KCG++ SA + F + ++ T W MI Y +G +A+ + KM+ E+P+ I
Sbjct: 562 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 621
Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIR-KGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
T ++VL +C+ G + G + + R G+ PE D+ +++ G++ + EK+
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHY-ICIVDCLGRAGRLEDAEKLAE 680
Query: 358 AIGER-NILSWNMLIS 372
A + + + W +L+S
Sbjct: 681 ATPYKSSSVLWEILLS 696
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 3 LFRSCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT-FKEP 58
+ SC LR L ++H ++ T + + + LI Y+E + S +FD E
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 59 DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFI-YPSVLRACSSLGDLGSGEKV 117
D W +I + N ++++L+ +M + N + +VL +CS L L G +
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
HG ++K G+ D ++T++ Y + G +D AR+ FD + ++ V W+ +I Y N
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 601
Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEAC 206
E + ++ M+ G +PD +T +S+ AC
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTAC 630
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 227/742 (30%), Positives = 377/742 (50%), Gaps = 15/742 (2%)
Query: 11 RKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCY 70
RK + LH + TGL D L+ YA+ +L S+ VF + D W ++
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 71 MWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDD 130
+ N +S+ + M + V+ ACSS+ +L GE +HG +IK G+ +
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 131 VIQ--TSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
+ SI+ Y + G + A VF+++ RDV+S ++I+ + N E + + M
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 189 R-EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG-PLGNSFIVMYSKCGD 246
+ ++PD T++S+ CG+L R R++HG+ +R +++ + NS I MY KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 247 LLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE--EPNLITLITVL 304
AE F R SW +MIS ++++G+ KA F +++ + +L T++ +L
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 305 GSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE-RN 363
SC L GKSVHC + + G G ++I Y C ++ + + E R+
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLGFGDNM-LSANSVINMYIGCRDLTSAFLRLETMSETRD 563
Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIH 422
+ SWN +IS A G E+L M G + D ++ ++SA GN+G + G H
Sbjct: 564 LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 623
Query: 423 GHVIK-IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
G IK + D +Q++LI MY +C A +F I ++ WN +I QN
Sbjct: 624 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 683
Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALT 541
E LF + L E +E+TF+ + A + +G G H LI G + + ++ AL
Sbjct: 684 EVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 740
Query: 542 DMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQML-DSGIKPNE 600
DMY+ CG L+T +VF + ++ +W+++I +G HG A LFK++ +S ++PN+
Sbjct: 741 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 800
Query: 601 VTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
+F+++L ACSHSG ++EG Y+ M FGV+P +H +VD+L R+G + A++ I
Sbjct: 801 SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 860
Query: 660 SMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDE 719
+ P +WGALL+ C H + K + + L ++ YY L+N Y G W+E
Sbjct: 861 GIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEE 920
Query: 720 FGKVRSIMEVTGLKKVPGYSTI 741
++R ++E LKK+PGYS I
Sbjct: 921 AVRLRKMVEDNALKKLPGYSVI 942
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 192/704 (27%), Positives = 335/704 (47%), Gaps = 15/704 (2%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+H L GL D S++L+ Y G L SS +FD KE D +W +I N
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 76 FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
+ ++ L+ +MI + + A SSL +H I+ G D + +
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
++ Y + L A VF M RD+VSW++I+ N + L+ F SM G E D
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDG--PLGNSFIVMYSKCGDLLSAERT 253
VT + AC + L S+HG V++ + +GNS I MYSKCGD +AE
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV-KEEPNLITLITVLGSCAGLGW 312
F ++ R S A+++ + +G F++A +M V K +P++ T++++ C L +
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408
Query: 313 LREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLIS 372
REG++VH +R M + ++I+ Y +CG ++ E + R+++SWN +IS
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468
Query: 373 EYARKGMSKEALELLVQMQT-WGLMPDSFS-VASSLSACGNVGSLQLGLQIHGHVIKIDC 430
+++ G + +A L ++ + + S S V + L++C + SL G +H + K+
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGF 528
Query: 431 KDEFVQS-SLIDMYSKCGFKNLAYLLFERIQQ-KSVVMWNSMICGFYQNGNSLEAINLFH 488
D + + S+I+MY C A+L E + + + + WNS+I G +G+ LE++ F
Sbjct: 529 GDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQ 588
Query: 489 QMYLNC-LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKC 547
M + D +T L I A N+G + +G+ H I D + L MY +C
Sbjct: 589 AMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRC 648
Query: 548 GDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNIL 607
D+++A +VF +S+ N+ SW+ +I + + LF+ + ++PNE+TF+ +L
Sbjct: 649 KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLL 705
Query: 608 WACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
A + GS G + G + + A +VD+ S G +E K+ + +
Sbjct: 706 SASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSI- 764
Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTG---TNDNGYYTLLS 708
S W ++++ H + + KELS N + + +LLS
Sbjct: 765 SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 808
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 171/588 (29%), Positives = 300/588 (51%), Gaps = 12/588 (2%)
Query: 88 REQATI-SNFIY-PSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGC 145
RE T+ S+F++ VLR+ + + VH +KCG +D + +L YG G
Sbjct: 78 RENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGE 137
Query: 146 LDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEA 205
L + +FD++ +DV+ W+S+I + N + +F M+ +G E D T+L A A
Sbjct: 138 LVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASA 197
Query: 206 CGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSW 265
L R +H + + D L N+ + +Y+K +L SAE F +E R SW
Sbjct: 198 LSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257
Query: 266 TAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
+++ +G +K+L+ F M +E + +T V+ +C+ + L G+S+H +I+
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 326 KGMGPE-YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL 384
G PE + +G ++I Y++CG E V + R+++S N +++ +A GM +EA
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377
Query: 385 ELLVQMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ--SSLID 441
+L QMQ+ + PD +V S S CG++ + G +HG+ ++++ + ++ +S+ID
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVID 437
Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMY--LNCLEMDE 499
MY KCG A LLF+ + +V WNSMI F QNG + +A NLF ++ +C +
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSL 497
Query: 500 VTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
T L + +C + L GK VH L G ++ ++ +MY C DL +A ++
Sbjct: 498 STVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLET 557
Query: 560 MSE-RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG-IKPNEVTFMNILWACSHSGSVE 617
MSE R++ SW+++I G ++ F+ M G I+ + +T + + A + G V
Sbjct: 558 MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 617
Query: 618 EGKFYFNAMRIFGV-EPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFP 664
+G+ F+ + I + E D Q ++ + R DIE A K+ + P
Sbjct: 618 QGR-CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 664
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 355 bits (911), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 210/652 (32%), Positives = 347/652 (53%), Gaps = 10/652 (1%)
Query: 98 YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
Y S+L ++ + + +H +I G ++ T + TY G + ARK+F++M
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMP 76
Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE--PDFVTMLSLAEACGELCSLRPA 215
++S++ +I Y + + +F MV EGV+ PD T +A+A GEL S++
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
+HG +LR D + N+ + MY G + A F ++ R SW MIS Y R+
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
G+ AL F M+ + + T++++L C L L G++VH + K +G + + +
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE-V 255
Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
AL+ Y +CG+M E V + R++++W +I+ Y G + ALEL MQ G+
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYL 454
P++ ++AS +S CG+ + G +HG ++ D +++SLI MY+KC +L +
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
+F + W+++I G QN +A+ LF +M +E + T + + A + +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 515 LEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSER----NVVSWSA 570
L + +H L G + T L +Y+KCG L++A ++F+ + E+ +VV W A
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 571 MIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RIF 629
+I YGMHG ++A +F +M+ SG+ PNE+TF + L ACSHSG VEEG F M +
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 630 GVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTI 689
HY C+VDLL R+G ++ A+ +I ++PF ++WGALL C H+ + + +
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 690 EKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+L + G Y LL+NIYA G W + KVRS+ME GL+K PG+STI
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 252 bits (644), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 171/680 (25%), Positives = 334/680 (49%), Gaps = 51/680 (7%)
Query: 4 FRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMW 63
F + ++ K LH H+ +TG + L +YA G + +R +F+ + +
Sbjct: 25 FAATQSISKTKALHCHV-ITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSY 83
Query: 64 AVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKVHGRI 121
++I+ Y+ + ++I ++ +M+ E + + YP V +A L + G VHGRI
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
++ F +D +Q ++L Y FG ++ AR VFD M +RDV+SW+++I+ Y+ N +++ L
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
MF MV E V+ D T++S+ CG L L R++H V +++ + N+ + MY
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
KCG + A F ++E+R +WT MI+ Y G + ALE M PN +T+
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIA 323
Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
+++ C + +GK +H +R+ + + + +LI YA+C ++ C +V +
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQQVYSDI-IIETSLISMYAKCKRVDLCFRVFSGASK 382
Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
+ W+ +I+ + + +AL L +M+ + P+ ++ S L A + L+ + I
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNI 442
Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQ----KSVVMWNSMICGFYQ 476
H ++ K + L+ +YSKCG A+ +F IQ+ K VV+W ++I G+
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 477 NGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI 536
+G+ A+ +F +M + + +E+TF +A+ ACS+ G +E+G + ++ +
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH-------- 554
Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
+ +++ N ++ ++D G G+L++A +L +
Sbjct: 555 --------------------YKTLARSN--HYTCIVDLLGRAGRLDEAYNLITTI---PF 589
Query: 597 KPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPD-LQHYACMVDL---LSRSGDIE 652
+P + +L AC +V+ G+ N ++F +EP+ +Y + ++ L R D+E
Sbjct: 590 EPTSTVWGALLAACVTHENVQLGEMAAN--KLFELEPENTGNYVLLANIYAALGRWKDME 647
Query: 653 GAFKMIHSMPF---PANGSI 669
M+ ++ P + +I
Sbjct: 648 KVRSMMENVGLRKKPGHSTI 667
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 21/241 (8%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE--- 57
+P + + +LR+ +H +L TG A+T L+ Y++ G+L S+ +F+ +E
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 58 -PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
D +W LI Y + ++ ++ +M+R T + + S L ACS G + G
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 117 VHGRIIKCGFDKDDVIQ-----TSILCTYGEFGCLDDARKVFDKMTSRDVVS-WSSIIAS 170
+ + + + T I+ G G LD+A + + + W +++A+
Sbjct: 547 ----LFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 171 YFDNADVSEGLKMFHSMVREGVEPD----FVTMLSLAEACGELCSLRPARSIHGHV-LRR 225
+ +V G +M + + E +EP+ +V + ++ A G + RS+ +V LR+
Sbjct: 603 CVTHENVQLG-EMAANKLFE-LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660
Query: 226 K 226
K
Sbjct: 661 K 661
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 321/597 (53%), Gaps = 6/597 (1%)
Query: 150 RKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL 209
R+++ V +W+ I + D E L +F M R G EP+ T +A+AC L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
+ +H H+++ D +G + + M+ KC + A + F ++ +R T+W AM+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
S + +SG KA F +M + P+ +T++T++ S + L+ +++H IR G+
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAI--GERNILSWNMLISEYARKGMSKEALELL 387
+ + I Y +CG + + V AI G+R ++SWN + Y+ G + +A L
Sbjct: 186 VQVT-VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKC 446
M PD + + ++C N +L G IH H I + +D ++ I MYSK
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
A LLF+ + ++ V W MI G+ + G+ EA+ LFH M + + D VT L+ I
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKD-IYIDTALTDMYAKCGDLQTAQRVFDSMSERNV 565
C G LE GKW+ + YG ++D + I AL DMY+KCG + A+ +FD+ E+ V
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTV 424
Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNA 625
V+W+ MI Y ++G +A LF +M+D KPN +TF+ +L AC+HSGS+E+G YF+
Sbjct: 425 VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 484
Query: 626 MR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRID 684
M+ ++ + P L HY+CMVDLL R G +E A ++I +M + IWGALLN C+IH+ +
Sbjct: 485 MKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVK 544
Query: 685 VMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+ + + L Y ++NIYA G WD F ++RSIM+ +KK PG S I
Sbjct: 545 IAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 291/604 (48%), Gaps = 42/604 (6%)
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
W + I+ + N ES+LL+ +M R +NF +P V +AC+ L D+G E VH +I
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 123 KCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLK 182
K F D + T+ + + + +D A KVF++M RD +W+++++ + + +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 183 MFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
+F M + PD VT+++L ++ SL+ ++H +R + + + N++I Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 243 KCGDLLSAERTFVKIEK--RCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
KCGDL SA+ F I++ R SW +M Y+ G A + ML + +P+L T
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIG 360
I + SC L +G+ +H I G + + + I Y++ + +
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAIN-TFISMYSKSEDTCSARLLFDIMT 318
Query: 361 ERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
R +SW ++IS YA KG EAL L M G PD ++ S +S CG GSL+ G
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 421 IHGHVIKIDCKDEFVQ--SSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
I CK + V ++LIDMYSKCG + A +F+ +K+VV W +MI G+ NG
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 479 NSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDT 538
LEA+ LF +M + + +TFL +QAC++ G LEKG W + + + K +Y +
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEY-----FHIMKQVYNIS 492
Query: 539 ALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKP 598
D Y S M+D G G+L +A L + M KP
Sbjct: 493 PGLDHY------------------------SCMVDLLGRKGKLEEALELIRNM---SAKP 525
Query: 599 NEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQH-YACMVDLLSRSGDIEGAFKM 657
+ + +L AC +V+ + A +F +EP + Y M ++ + +G +G F
Sbjct: 526 DAGIWGALLNACKIHRNVKIAE--QAAESLFNLEPQMAAPYVEMANIYAAAGMWDG-FAR 582
Query: 658 IHSM 661
I S+
Sbjct: 583 IRSI 586
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 205/414 (49%), Gaps = 3/414 (0%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+HAHL+ + D T ++ + + S+ + VF+ E D+ W ++ + +
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 76 FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
+++ L+ +M + T + +++++ S L E +H I+ G D + +
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 136 ILCTYGEFGCLDDARKVFDKMT--SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVE 193
+ TYG+ G LD A+ VF+ + R VVSW+S+ +Y + + ++ M+RE +
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 194 PDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERT 253
PD T ++LA +C +L R IH H + D N+FI MYSK D SA
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 254 FVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWL 313
F + R SWT MIS Y G +AL F M++ E+P+L+TL++++ C G L
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 314 REGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISE 373
GK + + G + + ALI+ Y++CG + E + E+ +++W +I+
Sbjct: 374 ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAG 433
Query: 374 YARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
YA G+ EAL+L +M P+ + + L AC + GSL+ G + + H++K
Sbjct: 434 YALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMK 486
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 182/371 (49%), Gaps = 12/371 (3%)
Query: 1 MPLFRSCT---NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
M L +S + +L+ L +HA + G+ + I +Y + G L S++LVF+
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216
Query: 58 PDSFM--WAVLIKCYMWNNFFEESILLYHKMIREQ--ATISNFIYPSVLRACSSLGDLGS 113
D + W + K Y ++ LY M+RE+ +S FI ++ +C + L
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI--NLAASCQNPETLTQ 274
Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
G +H I G D+D + + Y + AR +FD MTSR VSW+ +I+ Y +
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
D+ E L +FH+M++ G +PD VT+LSL CG+ SL + I K D +
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394
Query: 234 -GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVK 292
N+ I MYSKCG + A F ++ +WT MI+ Y +G F +AL+ F KM+++
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 293 EEPNLITLITVLGSCAGLGWLREG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSE 351
+PN IT + VL +CA G L +G + H + P D+ +++ GK+ E
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS-CMVDLLGRKGKLEE 513
Query: 352 CEKVIHAIGER 362
++I + +
Sbjct: 514 ALELIRNMSAK 524
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 353 bits (906), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 204/654 (31%), Positives = 345/654 (52%), Gaps = 18/654 (2%)
Query: 94 SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
SNFI +LR G + + KV+ + K+ V +++ + + G + AR +F
Sbjct: 51 SNFIVEDLLRR----GQVSAARKVYDEMPH----KNTVSTNTMISGHVKTGDVSSARDLF 102
Query: 154 DKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG--VEPDFVTMLSLAEACGELCS 211
D M R VV+W+ ++ Y N+ E K+F M R PD VT +L C +
Sbjct: 103 DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVP 162
Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG--DLLSAERTFVKIEKRCTTSWTAMI 269
+H ++ + L S +++ S C L A F +I ++ + ++ +I
Sbjct: 163 QNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLI 222
Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG 329
+ Y + G + +++ F+KM + +P+ T VL + GL G+ +H + G
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 330 PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQ 389
+ +G +++FY++ ++ E + + E + +S+N++IS Y++ + +L +
Sbjct: 283 RDAS-VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 390 MQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF--VQSSLIDMYSKCG 447
MQ G +F A+ LS N+ SLQ+G Q+H + + D V +SL+DMY+KC
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCE 400
Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
A L+F+ + Q++ V W ++I G+ Q G + LF +M + L D+ TF T ++
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
A ++ L GK +H +I G ++++ + L DMYAKCG ++ A +VF+ M +RN VS
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR 627
W+A+I + +G A F +M++SG++P+ V+ + +L ACSH G VE+G YF AM
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Query: 628 -IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
I+G+ P +HYACM+DLL R+G A K++ MPF + +W ++LN CRIHK +
Sbjct: 581 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLA 640
Query: 687 -KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
+ EK S+ D Y +SNIYA G W++ V+ M G+KKVP YS
Sbjct: 641 ERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 151/614 (24%), Positives = 298/614 (48%), Gaps = 8/614 (1%)
Query: 26 HYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHK 85
H + ++ +I + + G + S+R +FD + W +L+ Y N+ F+E+ L+ +
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 86 MIREQA-TISNFI-YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS--ILCTYG 141
M R + T+ + + + ++L C+ + +VH +K GFD + + S +L +Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 142 EFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS 201
E LD A +F+++ +D V+++++I Y + +E + +F M + G +P T
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
+ +A L + +H + D +GN + YSK +L F ++ +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
S+ +IS Y+++ ++ +L F +M + + T+L A L L+ G+ +HC
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
Q + ++G +L++ YA+C E E + ++ +R +SW LIS Y +KG+
Sbjct: 376 QALL-ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-DCKDEFVQSSLI 440
L+L +M+ L D + A+ L A + SL LG Q+H +I+ + ++ F S L+
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
DMY+KCG A +FE + ++ V WN++I NG+ AI F +M + L+ D V
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDS 559
+ L + ACS+ G +E+G + YG+ + D+ + G A+++ D
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 560 MS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEE 618
M E + + WS++++ +H + A +++ + ++++ + +G E+
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 619 GKFYFNAMRIFGVE 632
+ AMR G++
Sbjct: 675 VRDVKKAMRERGIK 688
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 250/531 (47%), Gaps = 22/531 (4%)
Query: 15 RLHAHLLVTGLHYDP--PASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMW 72
++HA + G +P S L++SY E+ L + ++F+ E DS + LI Y
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 73 NNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVI 132
+ + ESI L+ KM + S+F + VL+A L D G+++H + GF +D +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 133 QTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGV 192
IL Y + + + R +FD+M D VS++ +I+SY L F M G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 193 EP---DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLS 249
+ F TMLS+A L SL+ R +H L +GNS + MY+KC
Sbjct: 348 DRRNFPFATMLSIA---ANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 250 AERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAG 309
AE F + +R T SWTA+IS Y + G L+ F KM + T TVL + A
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 310 LGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNM 369
L GK +H IIR G E + G L++ YA+CG + + +V + +RN +SWN
Sbjct: 465 FASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523
Query: 370 LISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG---LQIHGHVI 426
LIS +A G + A+ +M GL PDS S+ L+AC + G ++ G Q +
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 427 KIDCKDEFVQSSLIDMYSKCG-FKNLAYLLFERIQQKSVVMWNSMI--CGFYQNGNSLE- 482
I K + + ++D+ + G F L+ E + +MW+S++ C ++N + E
Sbjct: 584 GITPKKKHY-ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAER 642
Query: 483 -AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
A LF L D +++ + G+ EK + V + G++K
Sbjct: 643 AAEKLFSMEKLR----DAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKK 689
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 352 bits (903), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 215/675 (31%), Positives = 352/675 (52%), Gaps = 6/675 (0%)
Query: 9 NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
+ +K R+H + GL D T L+E Y + L S+R VFD D W ++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 69 CYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDK 128
N ++LL+H M I + +++ A S L +HG +IK GF
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
+ ++ Y L A VF+++ +D SW +++A+Y N E L++F M
Sbjct: 235 --AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
V + V S +A + L +IH + +++ + D + S + MYSKCG+L
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
AE+ F+ IE R SW+AMI+ Y ++G +A+ F M+ + +PN +TL +VL CA
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
G+ R GKS+HC I+ + E + A+I YA+CG+ S K + ++ +++N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELE-TATAVISMYAKCGRFSPALKAFERLPIKDAVAFN 471
Query: 369 MLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI 428
L Y + G + +A ++ M+ G+ PDS ++ L C G ++G +IK
Sbjct: 472 ALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKH 531
Query: 429 DCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMICGFYQNGNSLEAINL 486
E V +LI+M++KC A +LF++ +KS V WN M+ G+ +G + EA+
Sbjct: 532 GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVAT 591
Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
F QM + + + VTF+ ++A + + L G VH LI G + +L DMYAK
Sbjct: 592 FRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAK 651
Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
CG ++++++ F +S + +VSW+ M+ Y HG + A SLF M ++ +KP+ V+F+++
Sbjct: 652 CGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSV 711
Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
L AC H+G VEEGK F M +E +++HYACMVDLL ++G A +M+ M
Sbjct: 712 LSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKT 771
Query: 666 NGSIWGALLNGCRIH 680
+ +WGALLN R+H
Sbjct: 772 SVGVWGALLNSSRMH 786
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/657 (28%), Positives = 343/657 (52%), Gaps = 10/657 (1%)
Query: 3 LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
+ R C N R L ++H L+V+GL +LI +Y+ SR++FD+ ++P +
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGL----KPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVL 66
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRI 121
W +I+ Y E++ + M E+ + + + L+AC+ D G ++H I
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 122 IKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGL 181
+ G + D I T+++ Y + L AR+VFDKM +DVV+W+++++ N S L
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 182 KMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMY 241
+FH M V+ D V++ +L A +L R +HG V+++ + I MY
Sbjct: 187 LLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMY 244
Query: 242 SKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLI 301
C DL +AE F ++ ++ +SW M++ Y +G+F++ LE F M N +
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 302 TVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGE 361
+ L + A +G L +G ++H +++G+ + + +L+ Y++CG++ E++ I +
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS-VATSLMSMYSKCGELEIAEQLFINIED 363
Query: 362 RNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQI 421
R+++SW+ +I+ Y + G EA+ L M + P++ ++ S L C V + +LG I
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
Query: 422 HGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNS 480
H + IK D + E +++I MY+KCG + A FER+ K V +N++ G+ Q G++
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDA 483
Query: 481 LEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTAL 540
+A +++ M L+ + D T + +Q C+ +G V+ ++I +G + ++ AL
Sbjct: 484 NKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHAL 543
Query: 541 TDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPN 599
+M+ KC L A +FD E++ VSW+ M++ Y +HGQ +A + F+QM +PN
Sbjct: 544 INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603
Query: 600 EVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
VTF+NI+ A + ++ G +++ G +VD+ ++ G IE + K
Sbjct: 604 AVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEK 660
Score = 236 bits (601), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 278/554 (50%), Gaps = 5/554 (0%)
Query: 32 STRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQA 91
S+ LI+ Y L ++ VF+ D W ++ Y N FFEE + L+ M
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDV 296
Query: 92 TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARK 151
++ S L+A + +GDL G +H ++ G D + TS++ Y + G L+ A +
Sbjct: 297 RMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQ 356
Query: 152 VFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCS 211
+F + RDVVSWS++IASY E + +F M+R ++P+ VT+ S+ + C + +
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416
Query: 212 LRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISC 271
R +SIH + ++ I+ + + I MY+KCG A + F ++ + ++ A+
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476
Query: 272 YNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPE 331
Y + G KA + + M P+ T++ +L +CA G V+ QII+ G E
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSE 536
Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIG-ERNILSWNMLISEYARKGMSKEALELLVQM 390
++ ALI + +C ++ + G E++ +SWN++++ Y G ++EA+ QM
Sbjct: 537 C-HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFK 449
+ P++ + + + A + +L++G+ +H +I+ C V +SL+DMY+KCG
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMI 655
Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
+ F I K +V WN+M+ + +G + A++LF M N L+ D V+FL+ + AC
Sbjct: 656 ESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715
Query: 510 SNIGQLEKGKWVHHKL-ISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS- 567
+ G +E+GK + ++ + + ++ + D+ K G A + M + V
Sbjct: 716 RHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGV 775
Query: 568 WSAMIDCYGMHGQL 581
W A+++ MH L
Sbjct: 776 WGALLNSSRMHCNL 789
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/589 (25%), Positives = 266/589 (45%), Gaps = 9/589 (1%)
Query: 116 KVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
+VHG +I G ++ Y F D +R +FD + VV W+S+I Y
Sbjct: 23 QVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 176 DVSEGLKMFHSMVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLG 234
E L F M E G++PD + +AC + IH + ++ D +G
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
+ + MY K DL+SA + F K+ + +W M+S ++G AL F M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
+ ++L ++ + + L + +H +I+KG + LI+ Y C + E
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAF---SSGLIDMYCNCADLYAAES 255
Query: 355 VIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGS 414
V + ++ SW +++ YA G +E LEL M+ + + + + AS+L A VG
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 415 LQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
L G+ IH + ++ D V +SL+ MYSKCG +A LF I+ + VV W++MI
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKD 533
+ Q G EAI+LF M ++ + VT + +Q C+ + GK +H I + +
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 534 IYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
+ TA+ MYAKCG A + F+ + ++ V+++A+ Y G N A ++K M
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
G+ P+ T + +L C+ G + + G + + ++++ ++ +
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555
Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
A + F + W ++NG +H + + +++ V N
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNA 604
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 350/639 (54%), Gaps = 8/639 (1%)
Query: 110 DLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIA 169
+L +G VHG+II+ G ++ Y + G L A +F+ + +DVVSW+S+I
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 170 SYFDNADVSEG---LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK 226
Y N +S +++F M + + P+ T+ + +A L S R H V++
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 227 IKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV 286
D + S + MY K G + + F + +R T +W+ M+S Y G ++A++ F
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 287 KMLEVKEE--PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYA 344
L KEE + VL S A ++ G+ +HC I+ G+ + L AL+ Y+
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYS 267
Query: 345 ECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVAS 404
+C ++E K+ + G+RN ++W+ +++ Y++ G S EA++L +M + G+ P +++
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 405 SLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKS 463
L+AC ++ L+ G Q+H ++K+ + F ++L+DMY+K G A F+ +Q++
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 464 VVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
V +W S+I G+ QN ++ EA+ L+ +M + ++ T + ++ACS++ LE GK VH
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
I +G ++ I +AL+ MY+KCG L+ VF ++VVSW+AMI +GQ ++
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507
Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMV 642
A LF++ML G++P++VTF+NI+ ACSH G VE G FYFN M G++P + HYACMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567
Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
DLLSR+G ++ A + I S +W LL+ C+ H + ++ ++L G+ ++
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627
Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
Y LS IY G + +V M G+ K G S I
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 298/582 (51%), Gaps = 13/582 (2%)
Query: 9 NLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIK 68
NL +H ++ TG + L+ YA+ G L + +F+ D W LI
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 69 CYMWNNFFEES--ILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHGRIIKCG 125
Y N S ++ + +R Q + N + + +A SSL G + H ++K
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 126 FDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFH 185
D + TS++ Y + G ++D KVF M R+ +WS++++ Y V E +K+F+
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 186 SMVR---EGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYS 242
+R EG + D+V L+ + + R IH ++ + L N+ + MYS
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATI-YVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 243 KCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLIT 302
KC L A + F R + +W+AM++ Y+++G +A++ F +M +P+ T++
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 303 VLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGER 362
VL +C+ + +L EGK +H +++ G + + AL++ YA+ G +++ K + ER
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGF-ERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 363 NILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIH 422
++ W LIS Y + ++EAL L +M+T G++P+ ++AS L AC ++ +L+LG Q+H
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 423 GHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSL 481
GH IK E + S+L MYSKCG L+F R K VV WN+MI G NG
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 482 EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID--TA 539
EA+ LF +M +E D+VTF+ I ACS+ G +E+G W + ++S + D +D
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYAC 565
Query: 540 LTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQ 580
+ D+ ++ G L+ A+ +S + + + W ++ HG+
Sbjct: 566 MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGK 607
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 155/619 (25%), Positives = 291/619 (47%), Gaps = 65/619 (10%)
Query: 3 LFRSCTNLRKLT-RLHAHLLVTGLHY--DPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+F++ ++L+ T AH LV + D T L+ Y + G + VF E +
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIRE--QATISNFIYPSVLRACSSLGDLGSGEKV 117
++ W+ ++ Y EE+I +++ +RE + + S++++ +VL + ++ +G G ++
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
H IK G + +++ Y + L++A K+FD R+ ++WS+++ Y N +
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
E +K+F M G++P T++ + AC ++C L + +H +L+ + +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 238 IVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNL 297
+ MY+K G L A + F +++R WT++IS Y ++ ++AL + +M PN
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 298 ITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIH 357
T+ +VL +C+ L L GK VH I+ G G E +G AL Y++CG + + V
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP-IGSALSTMYSKCGSLEDGNLVFR 482
Query: 358 AIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQL 417
++++SWN +IS + G EALEL +M G+ PD + + +SAC + G ++
Sbjct: 483 RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVER 542
Query: 418 G---LQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
G + I +D K D + + ++D+ S+ G Q K +
Sbjct: 543 GWFYFNMMSDQIGLDPKVDHY--ACMVDLLSRAG------------QLKEAKEF------ 582
Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK- 532
+E+ N+ H + CL + + AC N G+ E G + KL++ G R+
Sbjct: 583 -------IESANIDHGL---CL------WRILLSACKNHGKCELGVYAGEKLMALGSRES 626
Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSMSERNV-----VSWSAMIDCY-------GMHGQ 580
Y+ L+ +Y G ++ +RV+ M V SW + + Y MH
Sbjct: 627 STYVQ--LSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Query: 581 LNDAASLF----KQMLDSG 595
+ + L +QM++ G
Sbjct: 685 IEETKDLVCLVSRQMIEEG 703
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 206/389 (52%), Gaps = 10/389 (2%)
Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
P+ TL+ L + L G++VH QIIR G + L+ FYA+CGK+++
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQH-ANVLVNFYAKCGKLAKAHS 70
Query: 355 VIHAIGERNILSWNMLISEYARKG---MSKEALELLVQMQTWGLMPDSFSVASSLSACGN 411
+ +AI ++++SWN LI+ Y++ G S ++L +M+ ++P+++++A A +
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 412 VGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSM 470
+ S +G Q H V+K+ D +V +SL+ MY K G +F + +++ W++M
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTM 190
Query: 471 ICGFYQNGNSLEAINLFHQMYLNCLEM---DEVTFLTAIQACSNIGQLEKGKWVHHKLIS 527
+ G+ G EAI +F+ ++L E + F + + + + G+ +H I
Sbjct: 191 VSGYATRGRVEEAIKVFN-LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 528 YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASL 587
G+ + + AL MY+KC L A ++FDS +RN ++WSAM+ Y +G+ +A L
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
F +M +GIKP+E T + +L ACS +EEGK + + G E L +VD+ ++
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNG 676
+G + A K + + ++W +L++G
Sbjct: 370 AGCLADARKGFDCLQ-ERDVALWTSLISG 397
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
T L + S L G+ VH ++I G I L + YAKCG L A +F+++
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 561 SERNVVSWSAMIDCYGMHGQLNDAAS---LFKQMLDSGIKPNEVTFMNILWACSHSGSVE 617
++VVSW+++I Y +G ++ + + LF++M I PN T I A S S
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 618 EGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG- 676
G+ + D+ +V + ++G +E K+ MP N W +++G
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGY 194
Query: 677 ---CRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYA 712
R+ + I V +E +D + +LS++ A
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 215/675 (31%), Positives = 348/675 (51%), Gaps = 8/675 (1%)
Query: 73 NNFFEESILLYHKMIREQA-TISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
+NF+ E++ + + + I Y S++ ACSS L G K+H I+ D +
Sbjct: 44 SNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI 103
Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
+ IL YG+ G L DAR+VFD M R++VS++S+I Y N +E ++++ M++E
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED 163
Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
+ PD S+ +AC + + +H V++ + N+ I MY + + A
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGL 310
R F I + SW+++I+ +++ G+ +AL +ML PN + L +C+ L
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL 283
Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
G +H I+ + G +L + YA CG ++ +V I + SWN++
Sbjct: 284 LRPDYGSQIHGLCIKSELAGNA-IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVI 342
Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID- 429
I+ A G + EA+ + QM++ G +PD+ S+ S L A +L G+QIH ++IK
Sbjct: 343 IAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402
Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKS-VVMWNSMICGFYQNGNSLEAINLFH 488
D V +SL+ MY+ C + LFE + + V WN+++ Q+ +E + LF
Sbjct: 403 LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFK 462
Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
M ++ E D +T ++ C I L+ G VH + G+ + +I L DMYAKCG
Sbjct: 463 LMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
L A+R+FDSM R+VVSWS +I Y G +A LFK+M +GI+PN VTF+ +L
Sbjct: 523 SLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLT 582
Query: 609 ACSHSGSVEEG-KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
ACSH G VEEG K Y G+ P +H +C+VDLL+R+G + A + I M +
Sbjct: 583 ACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDV 642
Query: 668 SIWGALLNGCRIHKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSI 726
+W LL+ C+ + + K E L + N + LL +++A GNW+ +RS
Sbjct: 643 VVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA-HVLLCSMHASSGNWENAALLRSS 701
Query: 727 MEVTGLKKVPGYSTI 741
M+ +KK+PG S I
Sbjct: 702 MKKHDVKKIPGQSWI 716
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/644 (28%), Positives = 319/644 (49%), Gaps = 18/644 (2%)
Query: 1 MPLFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
+ L +C++ R L ++H H+L + YD + ++ Y + GSLR +R VFD E
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 58 PDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKV 117
+ + +I Y N E+I LY KM++E F + S+++AC+S D+G G+++
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
H ++IK + Q +++ Y F + DA +VF + +D++SWSSIIA +
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 178 SEGLKMFHSMVREGV-EPDFVTMLSLAEACGELCSLRP--ARSIHGHVLRRKIKIDGPLG 234
E L M+ GV P+ S +AC L LRP IHG ++ ++ + G
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL--LRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEE 294
S MY++CG L SA R F +IE+ T SW +I+ +G+ +A+ F +M
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 295 PNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEK 354
P+ I+L ++L + L +G +H II+ G + +L+ Y C + C
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN-SLLTMYTFCSDLYCCFN 427
Query: 355 VIHAI-GERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
+ + +SWN +++ + E L L M PD ++ + L C +
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 414 SLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMIC 472
SL+LG Q+H + +K ++F+++ LIDMY+KCG A +F+ + + VV W+++I
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVR 531
G+ Q+G EA+ LF +M +E + VTF+ + ACS++G +E+G ++ + +G+
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQ 590
+ + D+ A+ G L A+R D M E +VV W ++ G ++ A +
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 591 MLDSGIKPNEVTFMNILWACSH--SGSVEEGKFYFNAMRIFGVE 632
+L I P T ++L H SG+ E ++M+ V+
Sbjct: 668 ILK--IDPFNST-AHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 345 bits (885), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 354/656 (53%), Gaps = 15/656 (2%)
Query: 98 YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
+ S+L++C D G+ VH R+I+ + D V+ S++ Y + G A VF+ M
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 158 ---SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRP 214
RDVVSWS+++A Y +N + +K+F + G+ P+ ++ AC +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 215 ARSIHGHVLRR-KIKIDGPLGNSFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISCY 272
R G +++ + D +G S I M+ K + +A + F K+ + +WT MI+
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEY 332
+ G+ ++A+ F+ M+ E + TL +V +CA L L GK +H IR G+
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL---V 301
Query: 333 DYLGPALIEFYAEC---GKMSECEKVIHAIGERNILSWNMLISEYARK-GMSKEALELLV 388
D + +L++ YA+C G + +C KV + + +++SW LI+ Y + ++ EA+ L
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 389 QMQTWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKC 446
+M T G + P+ F+ +S+ ACGN+ ++G Q+ G K + V +S+I M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
A FE + +K++V +N+ + G +N N +A L ++ L + TF + +
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
+N+G + KG+ +H +++ G+ + + AL MY+KCG + TA RVF+ M RNV+
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541
Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
SW++MI + HG F QM++ G+KPNEVT++ IL ACSH G V EG +FN+M
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
++P ++HYACMVDLL R+G + AF+ I++MPF A+ +W L CR+H ++
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
K +++ N+ Y LSNIYA G W+E ++R M+ L K G S I
Sbjct: 662 GKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 171/631 (27%), Positives = 318/631 (50%), Gaps = 30/631 (4%)
Query: 3 LFRSCTNLR--KLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDT---FK 56
L +SC R +L +L HA L+ + D LI Y++ G + VF+T F
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 57 EPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK 116
+ D W+ ++ CY N ++I ++ + + +++ Y +V+RACS+ +G G
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 117 VHGRIIKCG-FDKDDVIQTSILCTY--GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
G ++K G F+ D + S++ + GE ++A KVFDKM+ +VV+W+ +I
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGE-NSFENAYKVFDKMSELNVVTWTLMITRCMQ 246
Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
E ++ F MV G E D T+ S+ AC EL +L + +H +R + D +
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--V 304
Query: 234 GNSFIVMYSKC---GDLLSAERTFVKIEKRCTTSWTAMISCYNRS-GWFQKALESFVKML 289
S + MY+KC G + + F ++E SWTA+I+ Y ++ +A+ F +M+
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 290 -EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGK 348
+ EPN T + +C L R GK V Q ++G+ + ++I + + +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN-SSVANSVISMFVKSDR 423
Query: 349 MSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSA 408
M + ++ ++ E+N++S+N + R ++A +LL ++ L +F+ AS LS
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 409 CGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMW 467
NVGS++ G QIH V+K+ ++ V ++LI MYSKCG + A +F ++ ++V+ W
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543
Query: 468 NSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI- 526
SMI GF ++G ++ + F+QM ++ +EVT++ + ACS++G + +G W H +
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG-WRHFNSMY 602
Query: 527 -SYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDA 584
+ ++ + + D+ + G L A ++M + +V+ W + +H
Sbjct: 603 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662
Query: 585 ASLFKQMLDSGIKPNE----VTFMNILWACS 611
+++L+ + PNE + NI +AC+
Sbjct: 663 KLAARKILE--LDPNEPAAYIQLSNI-YACA 690
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/554 (26%), Positives = 276/554 (49%), Gaps = 14/554 (2%)
Query: 167 IIASYFDNADVSEGLKMFHSMVREGVEP-DFVTMLSLAEACGELCSLRPARSIHGHVLRR 225
+I + + D+ + M R+G+ P D VT SL ++C R + +H ++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 226 KIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIE---KRCTTSWTAMISCYNRSGWFQKAL 282
I+ D L NS I +YSK GD AE F + KR SW+AM++CY +G A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 283 ESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEF 342
+ FV+ LE+ PN V+ +C+ ++ G+ +++ G +G +LI+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 343 YAEC-GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFS 401
+ + KV + E N+++W ++I+ + G +EA+ + M G D F+
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKC---GFKNLAYLLFER 458
++S SAC + +L LG Q+H I+ D+ V+ SL+DMY+KC G + +F+R
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD-VECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 459 IQQKSVVMWNSMICGFYQNGN-SLEAINLFHQMYLNC-LEMDEVTFLTAIQACSNIGQLE 516
++ SV+ W ++I G+ +N N + EAINLF +M +E + TF +A +AC N+
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 517 KGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYG 576
GK V + G+ + + ++ M+ K ++ AQR F+S+SE+N+VS++ +D
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 577 MHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQ 636
+ A L ++ + + + TF ++L ++ GS+ +G+ + + G+ +
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 637 HYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK-RIDVMKTIEKELSV 695
++ + S+ G I+ A ++ + M N W +++ G H I V++T + +
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 696 -TGTNDNGYYTLLS 708
N+ Y +LS
Sbjct: 570 GVKPNEVTYVAILS 583
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 345 bits (884), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 207/655 (31%), Positives = 342/655 (52%), Gaps = 11/655 (1%)
Query: 91 ATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDAR 150
A IS Y + +S+ L + H +II GF D + T + + G + AR
Sbjct: 16 ALISKNTYLDFFKRSTSISHLA---QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYAR 72
Query: 151 KVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMF-HSMVREGVEPDFVTMLSLAEACGEL 209
+F + DV ++ ++ + N L +F H ++P+ T A
Sbjct: 73 DIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGF 132
Query: 210 CSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
R R IHG + + LG++ + MY K + A + F ++ ++ T W MI
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 270 SCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGM 328
S Y ++ + ++++ F ++ E + TL+ +L + A L LR G +H + G
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
+DY+ I Y++CGK+ + + +I+++N +I Y G ++ +L L
Sbjct: 253 Y-SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCG 447
++ G S ++ S + G+ L L IHG+ +K + V ++L +YSK
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 448 FKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQ 507
A LF+ +KS+ WN+MI G+ QNG + +AI+LF +M + + VT +
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 508 ACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS 567
AC+ +G L GKWVH + S IY+ TAL MYAKCG + A+R+FD M+++N V+
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 568 WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM- 626
W+ MI YG+HGQ +A ++F +ML+SGI P VTF+ +L+ACSH+G V+EG FN+M
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 627 RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVM 686
+G EP ++HYACMVD+L R+G ++ A + I +M S+W LL CRIHK ++
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 687 KTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+T+ ++L ++ GY+ LLSNI++ + N+ + VR + L K PGY+ I
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/619 (25%), Positives = 310/619 (50%), Gaps = 12/619 (1%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
+ F+ T++ L + HA +++ G D T+L + +++G++ +R +F + + PD
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
F++ VL++ + N S+ ++ + + N Y + A S D +G +HG
Sbjct: 84 FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG 143
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
+ + G D + ++ ++I+ Y +F ++DARKVFD+M +D + W+++I+ Y N E
Sbjct: 144 QAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 203
Query: 180 GLKMFHSMVREG-VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
+++F ++ E D T+L + A EL LR IH + + FI
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
+YSKCG + F + K ++ AMI Y +G + +L F +++
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323
Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
TL++++ L + ++H ++ + + AL Y++ ++ K+
Sbjct: 324 TLVSLVPVSGHLMLIY---AIHGYCLKSNF-LSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
E+++ SWN +IS Y + G++++A+ L +MQ P+ ++ LSAC +G+L LG
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 419 LQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
+H V D + +V ++LI MY+KCG A LF+ + +K+ V WN+MI G+ +
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499
Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYI 536
G EA+N+F++M + + VTFL + ACS+ G +++G + + +I YG +
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 537 DTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSG 595
+ D+ + G LQ A + ++MS E W ++ +H N A ++ +++ +
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE-- 617
Query: 596 IKPNEVTFMNILWACSHSG 614
+ P+ V + ++L + HS
Sbjct: 618 LDPDNVGY-HVLLSNIHSA 635
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 308/553 (55%), Gaps = 16/553 (2%)
Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
+T+LS A+ +L + +H V+ + + LG+S Y + L A +F
Sbjct: 10 LLTILSQAK------TLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFN 63
Query: 256 KIE--KRCTTSWTAMISCYNRSGW--FQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
+I KR SW ++S Y++S + L + +M + + L+ + +C GLG
Sbjct: 64 RIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLG 123
Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
L G +H ++ G+ + DY+ P+L+E YA+ G M +KV I RN + W +L+
Sbjct: 124 LLENGILIHGLAMKNGLDKD-DYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK---I 428
Y + E L M+ GL D+ ++ + ACGNV + ++G +HG I+ I
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 429 DCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFH 488
D + +++Q+S+IDMY KC + A LFE ++VVMW ++I GF + ++EA +LF
Sbjct: 243 D-QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 489 QMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCG 548
QM + ++ T + +CS++G L GK VH +I G+ D T+ DMYA+CG
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG 361
Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
++Q A+ VFD M ERNV+SWS+MI+ +G++G +A F +M + PN VTF+++L
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421
Query: 609 ACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANG 667
ACSHSG+V+EG F +M R +GV P+ +HYACMVDLL R+G+I A I +MP
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA 481
Query: 668 SIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIM 727
S WGALL+ CRIHK +D+ I ++L + Y LLSNIYA+ G W+ VR M
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKM 541
Query: 728 EVTGLKKVPGYST 740
+ G +K G S
Sbjct: 542 GIKGYRKHVGQSA 554
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 262/501 (52%), Gaps = 9/501 (1%)
Query: 100 SVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-- 157
++L S L ++VH ++I GF+ + V+ +S+ Y + LD A F+++
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 158 SRDVVSWSSIIASYFDNADV--SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
R+ SW++I++ Y + S+ L +++ M R D ++ +AC L L
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRS 275
IHG ++ + D + S + MY++ G + SA++ F +I R + W ++ Y +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 276 GWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYL 335
+ F M + + +TLI ++ +C + + GK VH IR+ + DYL
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 336 GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGL 395
++I+ Y +C + K+ +RN++ W LIS +A+ + EA +L QM +
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 396 MPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDMYSKCGFKNLAYL 454
+P+ ++A+ L +C ++GSL+ G +HG++I+ + + V +S IDMY++CG +A
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 455 LFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQ 514
+F+ + +++V+ W+SMI F NG EA++ FH+M + + VTF++ + ACS+ G
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 515 LEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVS-WSAM 571
+++G W + ++ YGV + + D+ + G++ A+ D+M + + S W A+
Sbjct: 429 VKEG-WKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 572 IDCYGMHGQLNDAASLFKQML 592
+ +H +++ A + +++L
Sbjct: 488 LSACRIHKEVDLAGEIAEKLL 508
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 219/429 (51%), Gaps = 18/429 (4%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK---- 56
+ + L ++HA +++ G + + L +Y ++S+RL F T
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAY-----IQSNRLDFATSSFNRI 65
Query: 57 ---EPDSFMWAVLIKCYMWNNF--FEESILLYHKMIREQATISNFIYPSVLRACSSLGDL 111
+ + W ++ Y + + + +LLY++M R + +F ++AC LG L
Sbjct: 66 PCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125
Query: 112 GSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASY 171
+G +HG +K G DKDD + S++ Y + G ++ A+KVFD++ R+ V W ++ Y
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY 185
Query: 172 FDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRK-IKID 230
+ E ++F M G+ D +T++ L +ACG + + + + +HG +RR I
Sbjct: 186 LKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245
Query: 231 GPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLE 290
L S I MY KC L +A + F R WT +IS + + +A + F +ML
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR 305
Query: 291 VKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLG-PALIEFYAECGKM 349
PN TL +L SC+ LG LR GKSVH +IR G+ E D + + I+ YA CG +
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI--EMDAVNFTSFIDMYARCGNI 363
Query: 350 SECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSAC 409
V + ERN++SW+ +I+ + G+ +EAL+ +M++ ++P+S + S LSAC
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Query: 410 GNVGSLQLG 418
+ G+++ G
Sbjct: 424 SHSGNVKEG 432
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 207/398 (52%), Gaps = 12/398 (3%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+H + GL D + L+E YA++G++ S++ VFD +S +W VL+K Y+ +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 76 FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVIQT 134
E L+ M + +++AC ++ G+ VHG I+ F D+ D +Q
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
SI+ Y + LD+ARK+F+ R+VV W+++I+ + E +F M+RE + P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
+ T+ ++ +C L SLR +S+HG+++R I++D SFI MY++CG++ A F
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
+ +R SW++MI+ + +G F++AL+ F KM PN +T +++L +C+ G ++
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 315 EG-KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILS-WNMLIS 372
EG K G+ PE ++ +++ G++ E + I + + + S W L+S
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 373 E---YARKGMSKEALELLVQMQTWGLMPDSFSVASSLS 407
+ ++ E E L+ M+ P+ SV LS
Sbjct: 490 ACRIHKEVDLAGEIAEKLLSME-----PEKSSVYVLLS 522
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 327/596 (54%), Gaps = 45/596 (7%)
Query: 186 SMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
S+++ G + L +A + SL R + + +R I NS + +K G
Sbjct: 45 SVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYT----WNSVVTGLTKLG 100
Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
L A+ F + +R +W +M+S + + ++AL F M + N + +VL
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
+C+GL + +G VH I + + Y+G AL++ Y++CG +++ ++V +G+RN++
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDV-YIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
SWN LI+ + + G + EAL++ M + PD ++AS +SAC ++ ++++G ++HG V
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 426 IKIDC--KDEFVQSSLIDMYSKCG-------------FKNL------------------A 452
+K D D + ++ +DMY+KC +N+ A
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 453 YLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNI 512
L+F ++ +++VV WN++I G+ QNG + EA++LF + + +F ++AC+++
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 513 GQLEKGKWVHHKLISYGVR------KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVV 566
+L G H ++ +G + DI++ +L DMY KCG ++ VF M ER+ V
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 567 SWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM 626
SW+AMI + +G N+A LF++ML+SG KP+ +T + +L AC H+G VEEG+ YF++M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 627 -RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDV 685
R FGV P HY CMVDLL R+G +E A MI MP + IWG+LL C++H+ I +
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 686 MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
K + ++L +++G Y LLSN+YAE G W++ VR M G+ K PG S I
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/538 (27%), Positives = 256/538 (47%), Gaps = 79/538 (14%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI-------- 67
+HA ++ +G + RLI++Y++ GSL R VFD + + + W ++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 68 ---------------KCYMWNNFF---------EESILLYHKMIREQATISNFIYPSVLR 103
+C WN+ EE++ + M +E ++ + + SVL
Sbjct: 102 LDEADSLFRSMPERDQC-TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 104 ACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVS 163
ACS L D+ G +VH I K F D I ++++ Y + G ++DA++VFD+M R+VVS
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 164 WSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVL 223
W+S+I + N E L +F M+ VEPD VT+ S+ AC L +++ + +HG V+
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 224 RR-KIKIDGPLGNSFIVMYSKCGDL-------------------------------LSAE 251
+ K++ D L N+F+ MY+KC + +A
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
F K+ +R SW A+I+ Y ++G ++AL F + P + +L +CA L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 312 WLREGKSVHCQIIRKGM----GPEYD-YLGPALIEFYAECGKMSECEKVIHAIGERNILS 366
L G H +++ G G E D ++G +LI+ Y +CG + E V + ER+ +S
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 367 WNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVI 426
WN +I +A+ G EALEL +M G PD ++ LSACG+ G ++ G +
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 427 K----IDCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVVMWNSMI--CGFYQN 477
+ +D + + ++D+ + GF A + E + Q V+W S++ C ++N
Sbjct: 521 RDFGVAPLRDHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 215/479 (44%), Gaps = 74/479 (15%)
Query: 8 TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
++ K ++H+ + + D + L++ Y++ G++ ++ VFD + + W LI
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 68 KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
C+ N E++ ++ M+ + SV+ AC+SL + G++VHGR++K
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 128 KDDVI--------------------------------QTSILCTYGEFGCLDDARKVFDK 155
++D+I +TS++ Y AR +F K
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 156 MTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPA 215
M R+VVSW+++IA Y N + E L +F + RE V P + ++ +AC +L L
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 216 RSIHGHVLRRKIKI------DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMI 269
H HVL+ K D +GNS I MY KCG + F K+ +R SW AMI
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRK-GM 328
+ ++G+ +ALE F +MLE E+P+ IT+I VL +C G++ EG+ + R G+
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 329 GPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLV 388
P D+ + ++ R G +EA ++
Sbjct: 526 APLRDH--------------------------------YTCMVDLLGRAGFLEEAKSMIE 553
Query: 389 QMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQSSLIDMYSKCG 447
+M + PDS S L+AC ++ LG + +++++ + L +MY++ G
Sbjct: 554 EMP---MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 142/275 (51%), Gaps = 33/275 (12%)
Query: 421 IHGHVIKIDCKDE-FVQSSLIDMYSKC-------------------------------GF 448
+H VIK +E F+Q+ LID YSKC GF
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
+ A LF + ++ WNSM+ GF Q+ EA+ F M+ ++E +F + + A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 509 CSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSW 568
CS + + KG VH + D+YI +AL DMY+KCG++ AQRVFD M +RNVVSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 569 SAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK-FYFNAMR 627
+++I C+ +G +A +F+ ML+S ++P+EVT +++ AC+ +++ G+ + ++
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 628 IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMP 662
+ D+ VD+ ++ I+ A + SMP
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 519 KWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMH 578
++VH +I G +I+I L D Y+KCG L+ ++VFD M +RN+ +W++++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 579 GQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHY 638
G L++A SLF+ M + ++ T+ +++ + EE YF M G + +
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 639 ACMVDLLSRSGDIEGAFKMIHSM----PFPANGSIWGALLN 675
A ++ S D+ + +HS+ PF ++ I AL++
Sbjct: 156 ASVLSACSGLNDMNKGVQ-VHSLIAKSPFLSDVYIGSALVD 195
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 340 bits (871), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 339/616 (55%), Gaps = 7/616 (1%)
Query: 129 DDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMV 188
+D T L + + ++DA ++FD+M D W+ +I + E ++ + MV
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 189 REGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL 248
GV+ D T + ++ + SL + IH V++ D + NS I +Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 249 SAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCA 308
AE+ F ++ +R SW +MIS Y G +L F +ML+ +P+ + ++ LG+C+
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 309 GLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWN 368
+ + GK +HC +R + + ++++ Y++ G++S E++ + + +RNI++WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 369 MLISEYARKGMSKEALELLVQM-QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIK 427
++I YAR G +A +M + GL PD + + L A ++ G IHG+ ++
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMR 358
Query: 428 IDCKDEFV-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
V +++LIDMY +CG A ++F+R+ +K+V+ WNS+I + QNG + A+ L
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 487 FHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAK 546
F +++ + L D T + + A + L +G+ +H ++ + I +L MYA
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 547 CGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNI 606
CGDL+ A++ F+ + ++VVSW+++I Y +HG + LF +M+ S + PN+ TF ++
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 607 LWACSHSGSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPA 665
L ACS SG V+EG YF +M R +G++P ++HY CM+DL+ R+G+ A + + MPF
Sbjct: 539 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVP 598
Query: 666 NGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRS 725
IWG+LLN R HK I + + +++ ++ G Y LL N+YAE G W++ +++
Sbjct: 599 TARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKL 658
Query: 726 IMEVTGLKKVPGYSTI 741
+ME G+ + ST+
Sbjct: 659 LMESKGISRTSSRSTV 674
Score = 290 bits (741), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 287/538 (53%), Gaps = 11/538 (2%)
Query: 28 DPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMI 87
+ PA TR + +A+ + + +FD + D+F+W V+IK + + E++ Y +M+
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 88 REQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLD 147
F YP V+++ + + L G+K+H +IK GF D + S++ Y + GC
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 148 DARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACG 207
DA KVF++M RD+VSW+S+I+ Y D L +F M++ G +PD + +S AC
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 208 ELCSLRPARSIHGHVLRRKIKI-DGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWT 266
+ S + + IH H +R +I+ D + S + MYSK G++ AER F + +R +W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 267 AMISCYNRSGWFQKALESFVKMLEVKE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
MI CY R+G A F KM E +P++IT I +L + A L EG+++H +R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMR 358
Query: 326 KGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALE 385
+G P L ALI+ Y ECG++ E + + E+N++SWN +I+ Y + G + ALE
Sbjct: 359 RGFLPHM-VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 386 LLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLIDMYS 444
L ++ L+PDS ++AS L A SL G +IH +++K + + +SL+ MY+
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 445 KCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLT 504
CG A F I K VV WNS+I + +G ++ LF +M + + ++ TF +
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 505 AIQACSNIGQLEKGKWVHHKLIS--YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
+ ACS G +++G W + + + YG+ I + D+ + G+ A+R + M
Sbjct: 538 LLAACSISGMVDEG-WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 206/415 (49%), Gaps = 7/415 (1%)
Query: 8 TNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLI 67
++L + ++HA ++ G D LI Y ++G + VF+ E D W +I
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203
Query: 68 KCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFD 127
Y+ S++L+ +M++ F S L ACS + G+++H ++ +
Sbjct: 204 SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263
Query: 128 KDDV-IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHS 186
DV + TSIL Y ++G + A ++F+ M R++V+W+ +I Y N V++ F
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 187 MVRE-GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCG 245
M + G++PD +T ++L A L R+IHG+ +RR L + I MY +CG
Sbjct: 324 MSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 246 DLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
L SAE F ++ ++ SW ++I+ Y ++G ALE F ++ + P+ T+ ++L
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
+ A L EG+ +H I++ L +L+ YA CG + + K + I ++++
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILN-SLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQ 420
SWN +I YA G + ++ L +M + P+ + AS L+AC G + G +
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 339 bits (869), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 319/579 (55%), Gaps = 41/579 (7%)
Query: 200 LSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM--YSKCGDLLSAERTFVKI 257
+SL E C SLR + HGH++R D + M S L A + F +I
Sbjct: 34 ISLIERC---VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 258 EKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREG 316
K + +W +I Y ++ +F+ M+ E + PN T ++ + A + L G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 317 KSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYAR 376
+S+H ++ +G + ++ +LI Y CG + KV I E++++SWN +I+ + +
Sbjct: 151 QSLHGMAVKSAVGSDV-FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 377 KGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-V 435
KG +ALEL +M++ + ++ LSAC + +L+ G Q+ ++ + +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQ-------------------------------QKSV 464
++++DMY+KCG A LF+ ++ QK +
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHH 523
V WN++I + QNG EA+ +FH++ L ++++++T ++ + AC+ +G LE G+W+H
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 524 KLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLND 583
+ +G+R + ++ +AL MY+KCGDL+ ++ VF+S+ +R+V WSAMI MHG N+
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 584 AASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMV 642
A +F +M ++ +KPN VTF N+ ACSH+G V+E + F+ M +G+ P+ +HYAC+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNG 702
D+L RSG +E A K I +MP P + S+WGALL C+IH +++ + L ++G
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 703 YYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+ LLSNIYA+ G W+ ++R M VTGLKK PG S+I
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 253/521 (48%), Gaps = 43/521 (8%)
Query: 3 LFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRL--IESYAEMGSLRSSRLVFDTFKEPDS 60
L C +LR+L + H H++ TG DP ++++L + + + SL +R VFD +P+S
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISN-FIYPSVLRACSSLGDLGSGEKVHG 119
F W LI+ Y SI + M+ E N + +P +++A + + L G+ +HG
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
+K D + S++ Y G LD A KVF + +DVVSW+S+I + +
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
L++F M E V+ VTM+ + AC ++ +L R + ++ ++ ++ L N+ +
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 240 MYSKCGDLLSAERTFVKIEKRCTTSWT-------------------------------AM 268
MY+KCG + A+R F +E++ +WT A+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 269 ISCYNRSGWFQKALESFVKM-LEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
IS Y ++G +AL F ++ L+ + N ITL++ L +CA +G L G+ +H I + G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
+ + ++ ALI Y++CG + + +V +++ +R++ W+ +I A G EA+++
Sbjct: 396 IRMNF-HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID---CKDEFVQSSLIDMYS 444
+MQ + P+ + + AC + G + + H ++ + +E + ++D+
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF-HQMESNYGIVPEEKHYACIVDVLG 513
Query: 445 KCGFKNLAYLLFERIQ-QKSVVMWNSMI--CGFYQNGNSLE 482
+ G+ A E + S +W +++ C + N N E
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 336 bits (862), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 327/603 (54%), Gaps = 7/603 (1%)
Query: 144 GCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSM--VREGVEPDFVTMLS 201
G L AR+VFDKM D+VSW+SII Y + E L +F +M V V PD +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 202 LAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRC 261
+ +ACG+ ++ S+H + ++ + +G+S + MY + G + + R F ++ R
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 262 TTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHC 321
+WTA+I+ +G +++ L F +M +E + T L +CAGL ++ GK++H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 322 QIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSK 381
+I +G + +L Y ECG+M + + + ER+++SW LI Y R G
Sbjct: 234 HVIVRGFVTTL-CVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292
Query: 382 EALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLI 440
+A+E ++M+ + P+ + AS SAC ++ L G Q+H +V+ + D V +S++
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
MYS CG A +LF+ ++ + ++ W+++I G+ Q G E F M + + +
Sbjct: 353 KMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412
Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
+ + N+ +E G+ VH + +G+ ++ + ++L +MY+KCG ++ A +F
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET 472
Query: 561 SERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
++VS +AMI+ Y HG+ +A LF++ L G +P+ VTF+++L AC+HSG ++ G
Sbjct: 473 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGF 532
Query: 621 FYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRI 679
YFN M+ + + P +HY CMVDLL R+G + A KMI+ M + + +W LL C+
Sbjct: 533 HYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKA 592
Query: 680 HKRIDV-MKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGY 738
I+ + E+ L + T T L+NIY+ GN +E VR M+ G+ K PG+
Sbjct: 593 KGDIERGRRAAERILELDPTCATALVT-LANIYSSTGNLEEAANVRKNMKAKGVIKEPGW 651
Query: 739 STI 741
S+I
Sbjct: 652 SSI 654
Score = 266 bits (680), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 187/690 (27%), Positives = 328/690 (47%), Gaps = 59/690 (8%)
Query: 25 LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYH 84
+ +DP + R S G+LR++R VFD D W +IK Y+ N +E+++L+
Sbjct: 39 VKFDPNSHLR---SLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFS 95
Query: 85 KM--IREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGE 142
M + + + VL+AC ++ GE +H +K + +S+L Y
Sbjct: 96 AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 143 FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSL 202
G +D + +VF +M R+ V+W++II EGL F M R D T
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 203 AEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCT 262
+AC L ++ ++IH HV+ R + NS MY++CG++ F + +R
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 263 TSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQ 322
SWT++I Y R G KA+E+F+KM + PN T ++ +CA L L G+ +HC
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 323 IIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKE 382
++ G+ + ++++ Y+ CG + + + R+I+SW+ +I Y + G +E
Sbjct: 336 VLSLGLNDSLS-VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 383 ALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDC-KDEFVQSSLID 441
+ M+ G P F++AS LS GN+ ++ G Q+H + ++ V+SSLI+
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 442 MYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVT 501
MYSKCG A ++F + +V +MI G+ ++G S EAI+LF + D VT
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 502 FLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
F++ + AC++ GQL+ G H+ + + ++ Y +++ A+
Sbjct: 515 FISVLTACTHSGQLDLG--FHY----FNMMQETY-------------NMRPAKE------ 549
Query: 562 ERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKF 621
+ M+D G+L+DA + +M K ++V + +L AC G +E G+
Sbjct: 550 -----HYGCMVDLLCRAGRLSDAEKMINEM---SWKKDDVVWTTLLIACKAKGDIERGRR 601
Query: 622 YFNAMRIFGVEPD-LQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSI----W------ 670
A RI ++P + ++ S +G++E A + +M A G I W
Sbjct: 602 A--AERILELDPTCATALVTLANIYSSTGNLEEAANVRKNM--KAKGVIKEPGWSSIKIK 657
Query: 671 ---GALLNGCRIHKRIDVMKTIEKELSVTG 697
A ++G R H + + + I EL+V+G
Sbjct: 658 DCVSAFVSGDRFHPQSEDIYNI-LELAVSG 686
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/619 (24%), Positives = 267/619 (43%), Gaps = 49/619 (7%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
LHA+ + T L + L++ Y +G + S VF ++ W +I +
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR 189
Query: 76 FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
++E + + +M R + + + L+AC+ L + G+ +H +I GF + S
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANS 249
Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
+ Y E G + D +F+ M+ RDVVSW+S+I +Y + ++ F M V P+
Sbjct: 250 LATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPN 309
Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
T S+ AC L L +H +VL + + NS + MYS CG+L+SA F
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
+ R SW+ +I Y ++G+ ++ + F M + +P L ++L + +
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYA 375
G+ VH + G+ + + +LI Y++CG + E + +I+S +I+ YA
Sbjct: 430 GRQVHALALCFGL-EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 376 RKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV 435
G SKEA++L + G PDS + S L+AC + G L LG
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH--------------- 533
Query: 436 QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCL 495
+ N+ + K + M+ + G +A + ++M
Sbjct: 534 ------------YFNMMQETYNMRPAKE--HYGCMVDLLCRAGRLSDAEKMINEM---SW 576
Query: 496 EMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQR 555
+ D+V + T + AC G +E+G+ +++ + T L ++Y+ G+L+ A
Sbjct: 577 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVT-LANIYSSTGNLEEAAN 635
Query: 556 VFDSMSERNVVS---WSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSH 612
V +M + V+ WS++ ++ D S F + P NIL +
Sbjct: 636 VRKNMKAKGVIKEPGWSSI--------KIKDCVSAF--VSGDRFHPQSEDIYNIL-ELAV 684
Query: 613 SGSVEEGKFYFNAMRIFGV 631
SG+ E +F R FGV
Sbjct: 685 SGA-EAHRFDCTLKRAFGV 702
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 176/380 (46%), Gaps = 6/380 (1%)
Query: 4 FRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
++C LR++ +H H++V G + L Y E G ++ +F+ E D
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
W LI Y +++ + KM Q + + S+ AC+SL L GE++H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
++ G + + S++ Y G L A +F M RD++SWS+II Y EG
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 181 LKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVM 240
K F M + G +P + SL G + + R +H L ++ + + +S I M
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 241 YSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITL 300
YSKCG + A F + ++ S TAMI+ Y G ++A++ F K L+V P+ +T
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 301 ITVLGSCAGLGWLREGKSVHCQIIRK-GMGPEYDYLGPALIEFYAECGKMSECEKVIHAI 359
I+VL +C G L G + M P ++ G +++ G++S+ EK+I+ +
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYG-CMVDLLCRAGRLSDAEKMINEM 574
Query: 360 G-ERNILSWNMLISEYARKG 378
+++ + W L+ KG
Sbjct: 575 SWKKDDVVWTTLLIACKAKG 594
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 294/540 (54%), Gaps = 34/540 (6%)
Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKML-EVKE 293
N+ ++ YSK G + E TF K+ R +W +I Y+ SG A++++ M+ +
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
+TL+T+L + G + GK +H Q+I+ G Y +G L+ YA G +S+ +
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF-ESYLLVGSPLLYMYANVGCISDAK 194
Query: 354 KVIHAIGERNIL------------------------------SWNMLISEYARKGMSKEA 383
KV + + +RN + SW +I A+ G++KEA
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDM 442
+E +M+ GL D + S L ACG +G++ G QIH +I+ + +D +V S+LIDM
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
Y KC + A +F+R++QK+VV W +M+ G+ Q G + EA+ +F M + ++ D T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 503 LTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
AI AC+N+ LE+G H K I+ G+ + + +L +Y KCGD+ + R+F+ M+
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFY 622
R+ VSW+AM+ Y G+ + LF +M+ G+KP+ VT ++ ACS +G VE+G+ Y
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 623 FNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHK 681
F M +G+ P + HY+CM+DL SRSG +E A + I+ MPFP + W LL+ CR
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 682 RIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+++ K + L + YTLLS+IYA +G WD ++R M +KK PG S I
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 259/538 (48%), Gaps = 45/538 (8%)
Query: 81 LLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTY 140
+++ +IR F+Y +++ A + + +V RI + ++L Y
Sbjct: 27 MIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAY 82
Query: 141 GEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG----VEPDF 196
+ G + + F+K+ RD V+W+ +I Y + V +K +++M+R+
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 197 VTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVK 256
+TML L+ + G + SL + IHG V++ + +G+ + MY+ G + A++ F
Sbjct: 143 MTMLKLSSSNGHV-SL--GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 257 IEKRCT------------------------------TSWTAMISCYNRSGWFQKALESFV 286
++ R T SW AMI ++G ++A+E F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 287 KMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAEC 346
+M + + +VL +C GLG + EGK +H IIR ++ Y+G ALI+ Y +C
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF-QDHIYVGSALIDMYCKC 318
Query: 347 GKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSL 406
+ + V + ++N++SW ++ Y + G ++EA+++ + MQ G+ PD +++ ++
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVV 465
SAC NV SL+ G Q HG I V +SL+ +Y KCG + + LF + + V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 466 MWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL 525
W +M+ + Q G ++E I LF +M + L+ D VT I ACS G +EKG+ +
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 526 IS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS-ERNVVSWSAMIDCYGMHGQL 581
S YG+ I + + D++++ G L+ A R + M + + W+ ++ G L
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 257/562 (45%), Gaps = 65/562 (11%)
Query: 35 LIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIRE-QATI 93
L+ +Y++ G + F+ + D W VLI+ Y + ++ Y+ M+R+ A +
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 94 SNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVF 153
+ ++L+ SS G + G+++HG++IK GF+ ++ + +L Y GC+ DA+KVF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 154 ----DKMT--------------------------SRDVVSWSSIIASYFDNADVSEGLKM 183
D+ T +D VSW+++I N E ++
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 184 FHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSK 243
F M +G++ D S+ ACG L ++ + IH ++R + +G++ I MY K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 244 CGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITV 303
C L A+ F +++++ SWTAM+ Y ++G ++A++ F+ M +P+ TL
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 304 LGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERN 363
+ +CA + L EG H + I G+ Y + +L+ Y +CG + + ++ + + R+
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
+SW ++S YA+ G + E ++L +M GL PD ++ +SAC G ++ G
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG----- 491
Query: 424 HVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEA 483
Q M S+ G S+ ++ MI F ++G EA
Sbjct: 492 ------------QRYFKLMTSEYGI------------VPSIGHYSCMIDLFSRSGRLEEA 527
Query: 484 INLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDM 543
+ + M D + + T + AC N G LE GKW LI T L+ +
Sbjct: 528 MRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY-TLLSSI 583
Query: 544 YAKCGDLQTAQRVFDSMSERNV 565
YA G + ++ M E+NV
Sbjct: 584 YASKGKWDSVAQLRRGMREKNV 605
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 154/350 (44%), Gaps = 35/350 (10%)
Query: 15 RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNN 74
++HA ++ T + LI+ Y + L ++ VFD K+ + W ++ Y
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 350
Query: 75 FFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQT 134
EE++ ++ M R ++ + AC+++ L G + HG+ I G +
Sbjct: 351 RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSN 410
Query: 135 SILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEP 194
S++ YG+ G +DD+ ++F++M RD VSW++++++Y E +++F MV+ G++P
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP 470
Query: 195 DFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTF 254
D VT+ + AC + + F +M S+ G + S
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRY------------------FKLMTSEYGIVPS----- 507
Query: 255 VKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLR 314
++ MI ++RSG ++A+ F+ + P+ I T+L +C G L
Sbjct: 508 -------IGHYSCMIDLFSRSGRLEEAMR-FINGMPF--PPDAIGWTTLLSACRNKGNLE 557
Query: 315 EGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNI 364
GK +I + P + L YA GK ++ + E+N+
Sbjct: 558 IGKWAAESLIE--LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 427 KIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINL 486
+I + F ++L+ YSK G + FE++ + V WN +I G+ +G A+
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 487 FHQMYLN-CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYA 545
++ M + + VT +T ++ S+ G + GK +H ++I G + + + L MYA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 546 KCGDLQTAQRVFDSMSERNV------------------------------VSWSAMIDCY 575
G + A++VF + +RN VSW+AMI
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 576 GMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGK 620
+G +A F++M G+K ++ F ++L AC G++ EGK
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGK 290
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 24/211 (11%)
Query: 6 SCTNLRKL---TRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFM 62
+C N+ L ++ H + +GL + S L+ Y + G + S +F+ D+
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Query: 63 WAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRII 122
W ++ Y E+I L+ KM++ V+ ACS G + G++
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR------ 493
Query: 123 KCGFDKDDVIQTSILCTYGEFGC----------LDDARKVFDKMT-SRDVVSWSSIIASY 171
+ K + I+ + G + C L++A + + M D + W++++++
Sbjct: 494 ---YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 172 FDNADVSEGLKMFHSMVR-EGVEPDFVTMLS 201
+ ++ G S++ + P T+LS
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 506 IQACSNIGQLEKGKWV---HHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE 562
I+ C +G + ++V H +I + ++ + YA A+RVFD + +
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 563 RNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG-KF 621
N+ SW+ ++ Y G +++ S F+++ D + VT+ ++ S SG V K
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 622 YFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIH 659
Y MR F M+ L S +G + K IH
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLG-KQIH 162
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 203/653 (31%), Positives = 339/653 (51%), Gaps = 21/653 (3%)
Query: 98 YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT 157
Y ++LR C D S + +H I+K G D +L Y + G DA +FD+M
Sbjct: 52 YGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111
Query: 158 SRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD---FVTMLSLAEAC--GELCSL 212
R+ VS+ ++ Y + + ++ + REG E + F + L L + E+C
Sbjct: 112 ERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 213 RPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCY 272
+H +++ + +G + I YS CG + SA F I + W ++SCY
Sbjct: 168 -----LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 273 NRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG--MGP 330
+G+F+ +L+ M PN T T L + GLG K VH QI++ + P
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 331 EYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQM 390
+G L++ Y + G MS+ KV + + + +++ W+ +I+ + + G EA++L ++M
Sbjct: 283 R---VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 391 QTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFK 449
+ ++P+ F+++S L+ C LG Q+HG V+K+ D +V ++LID+Y+KC
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 450 NLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQAC 509
+ A LF + K+ V WN++I G+ G +A ++F + N + + EVTF +A+ AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 510 SNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWS 569
+++ ++ G VH I K + + +L DMYAKCGD++ AQ VF+ M +V SW+
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 570 AMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAM-RI 628
A+I Y HG A + M D KPN +TF+ +L CS++G +++G+ F +M R
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 629 FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKT 688
G+EP L+HY CMV LL RSG ++ A K+I +P+ + IW A+L+ + +
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 689 IEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+E+ D Y L+SN+YA W +R M+ G+KK PG S I
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 284/565 (50%), Gaps = 18/565 (3%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+H +L G D A+ L+ +Y + G + + +FD E ++ + L + Y
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC--- 127
Query: 76 FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
++ I LY ++ RE ++ ++ S L+ SL +H I+K G+D + + +
Sbjct: 128 -QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
++ Y G +D AR VF+ + +D+V W+ I++ Y +N + LK+ M G P+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
T + +A L + A+ +HG +L+ +D +G + +Y++ GD+ A + F
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVL-----GSCAGL 310
++ K W+ MI+ + ++G+ +A++ F++M E PN TL ++L G C+GL
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 311 GWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNML 370
G+ +H +++ G + Y+ ALI+ YA+C KM K+ + +N +SWN +
Sbjct: 367 -----GEQLHGLVVKVGFDLDI-YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 371 ISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKI-D 429
I Y G +A + + + + +S+L AC ++ S+ LG+Q+HG IK +
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480
Query: 430 CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQ 489
K V +SLIDMY+KCG A +F ++ V WN++I G+ +G +A+ +
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540
Query: 490 MYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLI-SYGVRKDIYIDTALTDMYAKCG 548
M + + +TFL + CSN G +++G+ +I +G+ + T + + + G
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600
Query: 549 DLQTAQRVFDSMS-ERNVVSWSAMI 572
L A ++ + + E +V+ W AM+
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAML 625
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 251/541 (46%), Gaps = 15/541 (2%)
Query: 1 MPLFRSCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
+ LF S LH+ ++ G + LI +Y+ GS+ S+R VF+ D
Sbjct: 153 LKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI 212
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGR 120
+WA ++ CY+ N +FE+S+ L M +N+ + + L+A LG + VHG+
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQ 272
Query: 121 IIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEG 180
I+K + D + +L Y + G + DA KVF++M DVV WS +IA + N +E
Sbjct: 273 ILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEA 332
Query: 181 LKMFHSMVREGVEPDFVTMLSLAEAC--GELCSLRPARSIHGHVLRRKIKIDGPLGNSFI 238
+ +F M V P+ T+ S+ C G+ L +HG V++ +D + N+ I
Sbjct: 333 VDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALI 390
Query: 239 VMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
+Y+KC + +A + F ++ + SW +I Y G KA F + L + +
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
T + LG+CA L + G VH I+ + + +LI+ YA+CG + + V +
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKV-AVSNSLIDMYAKCGDIKFAQSVFNE 509
Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
+ ++ SWN LIS Y+ G+ ++AL +L M+ P+ + LS C N G + G
Sbjct: 510 METIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Query: 419 LQ-----IHGHVIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ-QKSVVMWNSMIC 472
+ I H I+ C + + + ++ + + G + A L E I + SV++W +M+
Sbjct: 570 QECFESMIRDHGIE-PCLEHY--TCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 473 GFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRK 532
N N+ E + L DE T++ + Q + + GV+K
Sbjct: 627 A-SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKK 685
Query: 533 D 533
+
Sbjct: 686 E 686
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 351/673 (52%), Gaps = 45/673 (6%)
Query: 102 LRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDV 161
LR C + GE + +IK G ++ I +++ Y +F L DA KVFD+M+ R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 162 VSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLS-LAEACGELCSLRPARSIHG 220
V+W+++++ Y + ++ ++++ M+ E M S + +ACG + ++ ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 221 HVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQK 280
+ + ++ D L NS + MY K G L+ A +F +I + +TSW +IS Y ++G +
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 281 ALESFVKMLEVKEEPNLIT----------------------------------LITVLGS 306
A+ F +M +PN+++ L L +
Sbjct: 192 AVTLFHRM----PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 307 CAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA---IGERN 363
C+ G L GK +HC +++ G+ + ALI+ Y+ CG + V H +
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGL-ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHG 423
+ WN ++S + ++ AL LL+Q+ L DS++++ +L C N +L+LGLQ+H
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 424 HVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLE 482
V+ + D V S L+D+++ G A+ LF R+ K ++ ++ +I G ++G +
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426
Query: 483 AINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTD 542
A LF ++ L+ D+ ++ CS++ L GK +H I G + TAL D
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 543 MYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVT 602
MY KCG++ +FD M ER+VVSW+ +I +G +G++ +A F +M++ GI+PN+VT
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 603 FMNILWACSHSGSVEEGKFYFNAMRI-FGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
F+ +L AC HSG +EE + M+ +G+EP L+HY C+VDLL ++G + A ++I+ M
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 662 PFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFG 721
P + +IW +LL C HK ++ I ++L +D YT LSN YA G WD+
Sbjct: 607 PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLS 666
Query: 722 KVRSIMEVTGLKK 734
KVR + G K+
Sbjct: 667 KVREAAKKLGAKE 679
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/618 (26%), Positives = 284/618 (45%), Gaps = 47/618 (7%)
Query: 4 FRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDS 60
R C ++ R + AH++ G+ + + +I Y + L + VFD E +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 61 FMWAVLIKCYMWNNFFEESILLYHKMI-REQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
W ++ Y + ++I LY +M+ E+ + F+Y +VL+AC +GD+ G V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 120 RIIKCGFDKDDVIQTSI-------------------------------LCTYGEFGCLDD 148
RI K D V+ S+ + Y + G +D+
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 149 ARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGE 208
A +F +M +VVSW+ +I+ + D L+ M REG+ D + +AC
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 209 LCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTS---- 264
L + +H V++ ++ ++ I MYS CG L+ A F + EK S
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ-EKLAVNSSVAV 309
Query: 265 WTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQII 324
W +M+S + + + AL +++ + + TL L C LR G VH ++
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 325 RKGMGPEYDYL-GPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEA 383
G E DY+ G L++ +A G + + K+ H + ++I++++ LI + G + A
Sbjct: 370 VSGY--ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLA 427
Query: 384 LELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFVQ-SSLIDM 442
L ++ GL D F V++ L C ++ SL G QIHG IK + E V ++L+DM
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 443 YSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTF 502
Y KCG + +LF+ + ++ VV W +I GF QNG EA FH+M +E ++VTF
Sbjct: 488 YVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Query: 503 LTAIQACSNIGQLEKGKWVHHKLIS-YGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMS 561
L + AC + G LE+ + + S YG+ + + D+ + G Q A + + M
Sbjct: 548 LGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
Query: 562 -ERNVVSWSAMIDCYGMH 578
E + W++++ G H
Sbjct: 608 LEPDKTIWTSLLTACGTH 625
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 202/436 (46%), Gaps = 37/436 (8%)
Query: 15 RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFK---EPDSFMWAVLIKCYM 71
+LH ++ +GL P A + LI+ Y+ GSL + VF K +W ++ ++
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 72 WNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDV 131
N E ++ L ++ + ++ L+ C + +L G +VH ++ G++ D +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 132 IQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREG 191
+ + ++ + G + DA K+F ++ ++D++++S +I + S +F +++ G
Sbjct: 379 VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG 438
Query: 192 VEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAE 251
++ D + ++ + C L SL + IHG +++ + + + + MY KCG++ +
Sbjct: 439 LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV 498
Query: 252 RTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG 311
F + +R SWT +I + ++G ++A F KM+ + EPN +T + +L +C G
Sbjct: 499 VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558
Query: 312 WLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLI 371
L E +S + M EY L P L +Y V+ +G+
Sbjct: 559 LLEEARST-----LETMKSEYG-LEPYLEHYYC----------VVDLLGQ---------- 592
Query: 372 SEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCK 431
G+ +EA EL+ +M L PD S L+ACG + L I ++K
Sbjct: 593 -----AGLFQEANELINKMP---LEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPD 644
Query: 432 DEFVQSSLIDMYSKCG 447
D V +SL + Y+ G
Sbjct: 645 DPSVYTSLSNAYATLG 660
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 402 VASSLSACGNVGSLQLGLQIHGHVIKID-CKDEFVQSSLIDMYSKCGFKNLAYLLFERIQ 460
+A+ L CG V + + G I HVIK ++ F+ +++I MY + A+ +F+ +
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 461 QKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLE-MDEVTFLTAIQACSNIGQLEKGK 519
++++V W +M+ G+ +G +AI L+ +M + E +E + ++AC +G ++ G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 520 WVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHG 579
V+ ++ +R D+ + ++ DMY K G L A F + + SW+ +I Y G
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 580 QLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
+++A +LF +M +PN V+ W C SG V++G
Sbjct: 188 LMDEAVTLFHRM----PQPNVVS-----WNCLISGFVDKG 218
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 497 MDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRV 556
MD ++ C + ++G+ + +I G+ ++++I + MY L A +V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 557 FDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK-PNEVTFMNILWACSHSGS 615
FD MSERN+V+W+ M+ Y G+ N A L+++MLDS + NE + +L AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 616 VEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLN 675
++ G + + + D+ +VD+ ++G + A + P++ S W L++
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS-WNTLIS 181
Query: 676 G 676
G
Sbjct: 182 G 182
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 211/786 (26%), Positives = 399/786 (50%), Gaps = 49/786 (6%)
Query: 1 MPLFRSCTNLRKLTR---LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKE 57
+ + ++C ++ LT LH + G S ++ YA+ + + +F
Sbjct: 25 LDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDS 84
Query: 58 PDSFMWAVLIKCYMWNNFFEESILLYHKM-IREQATISNFIYPSVLRACSSLGDLGSGEK 116
D +W +++ + + E++ + M ++ S+ + VL C LGD +G+
Sbjct: 85 LDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143
Query: 117 VHGRIIKCGFDKDDVIQTSILCTYGEFG-CLDDARKVFDKMTSRDVVSWSSIIASYFDNA 175
+H IIK G +KD ++ +++ Y +FG DA FD + +DVVSW++IIA + +N
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 176 DVSEGLKMFHSMVREGVEPDFVTMLSLAEACGEL---CSLRPARSIHGHVLRRK-IKIDG 231
+++ + F M++E EP++ T+ ++ C + + R R IH +V++R ++
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHV 263
Query: 232 PLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEV 291
+ NS + Y + G + A F ++ + SW +I+ Y + + KA + F ++
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHK 323
Query: 292 KE-EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
+ P+ +T+I++L CA L L GK +H I+R E +G ALI FYA G S
Sbjct: 324 GDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTS 383
Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
+ ++I+SWN ++ +A + L LL + + DS ++ S L C
Sbjct: 384 AAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCI 443
Query: 411 NVGSLQLGLQIHGHVIKI----DCKDEFVQSSLIDMYSKCGFKNLAYLLFERI-QQKSVV 465
NV + ++HG+ +K D ++ + ++L+D Y+KCG A+ +F + +++++V
Sbjct: 444 NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLV 503
Query: 466 MWNSMICGFYQNGN-------------------SL------------EAINLFHQMYLNC 494
+NS++ G+ +G+ SL EAI +F ++
Sbjct: 504 SYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARG 563
Query: 495 LEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQ 554
+ + VT + + C+ + L + H +I G+ DI + L D+YAKCG L+ A
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAY 622
Query: 555 RVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSG 614
VF S + R++V ++AM+ Y +HG+ +A ++ M +S IKP+ V +L AC H+G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682
Query: 615 SVEEGKFYFNAMR-IFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGAL 673
+++G ++++R + G++P ++ YAC VDL++R G ++ A+ + MP N +IWG L
Sbjct: 683 LIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTL 742
Query: 674 LNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLK 733
L C + R+D+ ++ L ++D G + L+SN+YA + W+ ++R++M+ +K
Sbjct: 743 LRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMK 802
Query: 734 KVPGYS 739
K G S
Sbjct: 803 KPAGCS 808
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/629 (25%), Positives = 305/629 (48%), Gaps = 46/629 (7%)
Query: 97 IYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKM 156
++ V++AC+S+ DL SG +HG + K G + S+L Y + +DD +K+F +M
Sbjct: 23 VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSM-VREGVEPDFVTMLSLAEACGELCSLRPA 215
S D V W +I+ + + E ++ F +M + +P VT + C L
Sbjct: 83 DSLDPVVW-NIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 216 RSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLL-SAERTFVKIEKRCTTSWTAMISCYNR 274
+S+H ++++ ++ D +GN+ + MY+K G + A F I + SW A+I+ ++
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 275 SGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLG---WLREGKSVHCQIIRKGMGPE 331
+ A SF ML+ EPN T+ VL CA + R G+ +H ++++
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 332 YDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQ 391
+ ++ +L+ FY G++ E + +G ++++SWN++I+ YA +A +L +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 392 TWG-LMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKID--CKDEFVQSSLIDMYSKCGF 448
G + PDS ++ S L C + L G +IH ++++ +D V ++LI Y++ G
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 449 KNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQA 508
+ AY F + K ++ WN+++ F + + +NL H + + +D VT L+ ++
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441
Query: 509 CSNIGQLEKGKWVHHKLISYGVRKD---IYIDTALTDMYAKCGDLQTAQRVFDSMSER-- 563
C N+ + K K VH + G+ D + AL D YAKCG+++ A ++F +SER
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRT 501
Query: 564 ------------------------------NVVSWSAMIDCYGMHGQLNDAASLFKQMLD 593
++ +WS M+ Y N+A +F+++
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 594 SGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
G++PN VT MN+L C+ S+ + + I G D++ ++D+ ++ G ++
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVR-QCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKH 620
Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKR 682
A+ + S + ++ A++ G +H R
Sbjct: 621 AYSVFQS-DARRDLVMFTAMVAGYAVHGR 648
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 260/568 (45%), Gaps = 29/568 (5%)
Query: 191 GVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSA 250
G D L + +AC + L R++HG V + + S + MY+KC +
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 251 ERTFVKIEKRCTTSWTAM-----ISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLG 305
++ F +++ W + +SC + F KA+ + +P+ +T VL
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMH-----FADEPKPSSVTFAIVLP 130
Query: 306 SCAGLGWLREGKSVHCQIIRKGMGPEYDYL-GPALIEFYAECGKM-SECEKVIHAIGERN 363
C LG GKS+H II+ G+ E D L G AL+ YA+ G + + I +++
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGL--EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 364 ILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG---SLQLGLQ 420
++SWN +I+ ++ M +A M P+ ++A+ L C ++ + + G Q
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 421 IHGHVIKIDCKDE--FVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNG 478
IH +V++ FV +SL+ Y + G A LF R+ K +V WN +I G+ N
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 479 NSLEAINLFHQM-YLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYG-VRKDIYI 536
+A LFH + + + D VT ++ + C+ + L GK +H ++ + + +D +
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 537 DTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGI 596
AL YA+ GD A F MS ++++SW+A++D + + +L +L+ I
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAI 428
Query: 597 KPNEVTFMNILWACSHS---GSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEG 653
+ VT +++L C + G V+E Y + E + + ++D ++ G++E
Sbjct: 429 TLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEY 488
Query: 654 AFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAE 713
A K+ + + +LL+G D + + E+S T D ++L+ IYAE
Sbjct: 489 AHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS---TTDLTTWSLMVRIYAE 545
Query: 714 EGNWDEFGKVRSIMEVTGLKKVPGYSTI 741
+E V ++ G++ P TI
Sbjct: 546 SCCPNEAIGVFREIQARGMR--PNTVTI 571
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 229/759 (30%), Positives = 382/759 (50%), Gaps = 21/759 (2%)
Query: 1 MPLFRSCTNLRKLTRL---HAHLLVTGLHY--DPPASTRLIESYAE-MGSLRSSRLVFDT 54
+ + R+C + + L H L+ L Y D S LI Y + +GS+ + F
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 55 FKEPDSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLG--DLG 112
+ +S W +I Y + ++ M + + + + + S++ SL D+
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVR 225
Query: 113 SGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYF 172
E++ I K G D + + ++ + + G L ARKVF++M +R+ V+ + ++
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 173 DNADVSEGLKMF---HSMVREGVEPDFVTMLSLAE-ACGELCSLRPARSIHGHVLRRK-I 227
E K+F +SM+ E + + S E + E L+ R +HGHV+ +
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 228 KIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVK 287
+GN + MY+KCG + A R F + + + SW +MI+ +++G F +A+E +
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 288 MLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECG 347
M P TLI+ L SCA L W + G+ +H + ++ G+ + AL+ YAE G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS-VSNALMTLYAETG 464
Query: 348 KMSECEKVIHAIGERNILSWNMLISEYARKGMS-KEALELLVQMQTWGLMPDSFSVASSL 406
++EC K+ ++ E + +SWN +I AR S EA+ + Q G + + +S L
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 407 SACGNVGSLQLGLQIHGHVIKIDCKDE-FVQSSLIDMYSKCGFKNLAYLLFERI-QQKSV 464
SA ++ +LG QIHG +K + DE +++LI Y KCG + +F R+ +++
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 465 VMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHK 524
V WNSMI G+ N +A++L M +D + T + A +++ LE+G VH
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 644
Query: 525 LISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDA 584
+ + D+ + +AL DMY+KCG L A R F++M RN SW++MI Y HGQ +A
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 585 ASLFKQM-LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMR-IFGVEPDLQHYACMV 642
LF+ M LD P+ VTF+ +L ACSH+G +EEG +F +M +G+ P ++H++CM
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 643 DLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG-CRIHKRIDVMKTIEKELSVTGTNDN 701
D+L R+G+++ I MP N IW +L CR + R + E+ +N
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824
Query: 702 GY-YTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
Y LL N+YA G W++ K R M+ +KK GYS
Sbjct: 825 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Score = 246 bits (629), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 181/693 (26%), Positives = 335/693 (48%), Gaps = 14/693 (2%)
Query: 1 MPLFRSCTNLRKLTRL-HAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+ +SC R R H+ L L D LI +Y E G S+R VFD +
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGS--GEKV 117
WA ++ Y N +E+++ M++E + + + SVLRAC +G +G G ++
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGE-FGCLDDARKVFDKMTSRDVVSWSSIIASYFDNAD 176
HG + K + D V+ ++ Y + G + A F + ++ VSW+SII+ Y D
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 177 VSEGLKMFHSMVREGVEPDFVTMLSLAEACGELC--SLRPARSIHGHVLRRKIKIDGPLG 234
++F SM +G P T SL L +R I + + + D +G
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 235 NSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFV---KMLEV 291
+ + ++K G L A + F ++E R + ++ R W ++A + F+ M++V
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 292 KEEPNLITLITVLG-SCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS 350
E +I L + S A L++G+ VH +I G+ +G L+ YA+CG ++
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 351 ECEKVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACG 410
+ +V + + +++ +SWN +I+ + G EA+E M+ ++P SF++ SSLS+C
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 411 NVGSLQLGLQIHGHVIKIDCK-DEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNS 469
++ +LG QIHG +K+ + V ++L+ +Y++ G+ N +F + + V WNS
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 470 MICGFYQNGNSL-EAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISY 528
+I ++ SL EA+ F +++ +TF + + A S++ E GK +H +
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN 546
Query: 529 GVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSE-RNVVSWSAMIDCYGMHGQLNDAASL 587
+ + + AL Y KCG++ +++F M+E R+ V+W++MI Y + L A L
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606
Query: 588 FKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSR 647
ML +G + + + +L A + ++E G +E D+ + +VD+ S+
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666
Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNGCRIH 680
G ++ A + ++MP N W ++++G H
Sbjct: 667 CGRLDYALRFFNTMPVR-NSYSWNSMISGYARH 698
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 163/597 (27%), Positives = 292/597 (48%), Gaps = 17/597 (2%)
Query: 93 ISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKV 152
++N + S +++C +G G+ H R+ K DKD + +++ Y E G ARKV
Sbjct: 1 MTNCVPLSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKV 58
Query: 153 FDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSL 212
FD+M R+ VSW+ I++ Y N + E L MV+EG+ + +S+ AC E+ S+
Sbjct: 59 FDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
Query: 213 RP--ARSIHGHVLRRKIKIDGPLGNSFIVMYSKC-GDLLSAERTFVKIEKRCTTSWTAMI 269
R IHG + + +D + N I MY KC G + A F IE + + SW ++I
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSII 178
Query: 270 SCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGW--LREGKSVHCQIIRKG 327
S Y+++G + A F M P T +++ + L +R + + C I + G
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG 238
Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
+ + ++G L+ +A+ G +S KV + + RN ++ N L+ R+ +EA +L
Sbjct: 239 LLTDL-FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 388 VQMQTW-GLMPDSFSVASS----LSACGNVGSLQLGLQIHGHVIKIDCKDEFV--QSSLI 440
+ M + + P+S+ + S S VG L+ G ++HGHVI D V + L+
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 441 DMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEV 500
+MY+KCG A +F + K V WNSMI G QNG +EA+ + M + +
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 501 TFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSM 560
T ++++ +C+++ + G+ +H + + G+ ++ + AL +YA+ G L +++F SM
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 561 SERNVVSWSAMIDCYGMHGQ-LNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEG 619
E + VSW+++I + L +A F +G K N +TF ++L A S E G
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 620 KFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNG 676
K + + ++ + G+++G K+ M + W ++++G
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 328 bits (842), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 197/729 (27%), Positives = 376/729 (51%), Gaps = 5/729 (0%)
Query: 16 LHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAVLIKCYMWNNF 75
+H ++ GL + L+ Y + + ++R +FD F W V+I + +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 76 FEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS 135
F ++ L+ +M+ + F + SV+R+C+ L D+ G +VHG +IK GF+ + V+ +S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 136 ILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPD 195
+ Y + G +A ++F + + D +SW+ +I+S E L+ + MV+ GV P+
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 196 FVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFV 255
T + L A L L ++IH +++ R I ++ L S + YS+ + A R
Sbjct: 225 EFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 256 KIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLRE 315
++ WT+++S + R+ ++A+ +F++M + +PN T +L C+ + L
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 316 GKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMS-ECEKVIHAIGERNILSWNMLISEY 374
GK +H Q I+ G D +G AL++ Y +C E +V A+ N++SW LI
Sbjct: 344 GKQIHSQTIKVGFEDSTD-VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGL 402
Query: 375 ARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEF 434
G ++ LL++M + P+ +++ L AC + ++ L+IH ++++ E
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 435 V-QSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLN 493
V +SL+D Y+ + A+ + ++++ + + S++ F + G A+++ + MY +
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 494 CLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTA 553
+ MD+++ I A +N+G LE GK +H + G + +L DMY+KCG L+ A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 554 QRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHS 613
++VF+ ++ +VVSW+ ++ +G ++ A S F++M +P+ VTF+ +L ACS+
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642
Query: 614 GSVEEGKFYFNAM-RIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGA 672
+ G YF M +I+ +EP ++HY +V +L R+G +E A ++ +M N I+
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 702
Query: 673 LLNGCRIHKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGL 732
LL CR + + + + + +D Y LL+++Y E G + K R++M L
Sbjct: 703 LLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762
Query: 733 KKVPGYSTI 741
K G ST+
Sbjct: 763 SKKLGKSTV 771
Score = 249 bits (636), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 156/569 (27%), Positives = 298/569 (52%), Gaps = 13/569 (2%)
Query: 114 GEKVHGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFD 173
G +H +IK G ++ + ++L Y + + +ARK+FD+M+ R V +W+ +I+++
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 174 NADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPL 233
+ + + L +F M+ G P+ T S+ +C L + +HG V++ + + +
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 234 GNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKE 293
G+S +YSKCG A F ++ T SWT MIS + +++AL+ + +M++
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 294 EPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECE 353
PN T + +LG+ + LG L GK++H II +G+ P L +L++FY++ KM +
Sbjct: 222 PPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGI-PLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 354 KVIHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVG 413
+V+++ GE+++ W ++S + R +KEA+ ++M++ GL P++F+ ++ LS C V
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 414 SLQLGLQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNL-AYLLFERIQQKSVVMWNSMI 471
SL G QIH IK+ +D V ++L+DMY KC + A +F + +VV W ++I
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 472 CGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVR 531
G +G + L +M +E + VT ++ACS + + + +H L+ V
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD 459
Query: 532 KDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQM 591
++ + +L D YA + A V SM R+ +++++++ + G+ A S+ M
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM 519
Query: 592 LDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRIFGVEPDLQHYA----CMVDLLSR 647
GI+ ++++ + A ++ G++E GK + + V+ A +VD+ S+
Sbjct: 520 YGDGIRMDQLSLPGFISASANLGALETGKH----LHCYSVKSGFSGAASVLNSLVDMYSK 575
Query: 648 SGDIEGAFKMIHSMPFPANGSIWGALLNG 676
G +E A K+ + P S W L++G
Sbjct: 576 CGSLEDAKKVFEEIATPDVVS-WNGLVSG 603
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 175/660 (26%), Positives = 311/660 (47%), Gaps = 43/660 (6%)
Query: 3 LFRSCTNLRKLT---RLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPD 59
+ RSC LR ++ R+H ++ TG + + L + Y++ G + + +F + + D
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189
Query: 60 SFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHG 119
+ W ++I + + E++ Y +M++ + F + +L A S LG L G+ +H
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHS 248
Query: 120 RIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADVSE 179
II G + V++TS++ Y +F ++DA +V + +DV W+S+++ + N E
Sbjct: 249 NIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE 308
Query: 180 GLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSFIV 239
+ F M G++P+ T ++ C + SL + IH ++ + +GN+ +
Sbjct: 309 AVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVD 368
Query: 240 MYSKC-GDLLSAERTFVKIEKRCTTSWTAMISCYNRSGWFQKALESFVKMLEVKEEPNLI 298
MY KC + A R F + SWT +I G+ Q ++M++ + EPN++
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 299 TLITVLGSCAGLGWLREGKSVHCQIIRKGMGPEYDYLGPALIEFYAECGKMSECEKVIHA 358
TL VL +C+ L +R +H ++R+ + E +G +L++ YA K+ VI +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM-VVGNSLVDAYASSRKVDYAWNVIRS 487
Query: 359 IGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLG 418
+ R+ +++ L++ + G + AL ++ M G+ D S+ +SA N+G+L+ G
Sbjct: 488 MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG 547
Query: 419 LQIHGHVIKIDCKDEF-VQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICGFYQN 477
+H + +K V +SL+DMYSKCG A +FE I VV WN ++ G N
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASN 607
Query: 478 GNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYID 537
G A++ F +M + E D VTFL + ACSN G+ L + V K IY
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSN------GRLTDLGLEYFQVMKKIY-- 659
Query: 538 TALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIK 597
E V + ++ G G+L +A + + M +K
Sbjct: 660 ----------------------NIEPQVEHYVHLVGILGRAGRLEEATGVVETM---HLK 694
Query: 598 PNEVTFMNILWACSHSGSVEEGKFYFN-AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK 656
PN + F +L AC + G++ G+ N + + +P L Y + DL SG E A K
Sbjct: 695 PNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPAL--YILLADLYDESGKPELAQK 752
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 221/459 (48%), Gaps = 10/459 (2%)
Query: 208 ELCSLRPARSIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTA 267
E S R IH V++ + + L N+ + +Y K + +A + F ++ R +WT
Sbjct: 35 ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTV 94
Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
MIS + +S F AL F +M+ PN T +V+ SCAGL + G VH +I+ G
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154
Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEALELL 387
+G +L + Y++CG+ E ++ ++ + +SW M+IS +EAL+
Sbjct: 155 FEGN-SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 388 VQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHVIKIDCKDEFV-QSSLIDMYSKC 446
+M G+ P+ F+ L A +G L+ G IH ++I V ++SL+D YS+
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQF 272
Query: 447 GFKNLAYLLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAI 506
A + ++ V +W S++ GF +N + EA+ F +M L+ + T+ +
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 507 QACSNIGQLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQT-AQRVFDSMSERNV 565
CS + L+ GK +H + I G + AL DMY KC + A RVF +M NV
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 566 VSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACS---HSGSVEEGKFY 622
VSW+ +I HG + D L +M+ ++PN VT +L ACS H V E Y
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 623 FNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSM 661
+ G ++ +VD + S ++ A+ +I SM
Sbjct: 453 LLRRHVDG---EMVVGNSLVDAYASSRKVDYAWNVIRSM 488
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 326 bits (835), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 218/707 (30%), Positives = 348/707 (49%), Gaps = 109/707 (15%)
Query: 98 YPSVLRACSSLGDLGSGEKVHGRIIKCGFDKDDVIQTS-ILCTYGEFGCLDDARKVFDKM 156
Y +L++CSS + +G ++K GF VI + +L Y G + AR +FD+M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 157 TSRDVVSWSSIIASYFDNADVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPAR 216
R+ SW+++I Y ++ + L+ F M P R
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM--------------------------PER 122
Query: 217 SIHGHVLRRKIKIDGPLGNSFIVMYSKCGDLLSAERTFVKIEKRCTTSWTAMISCYNRSG 276
DG N + ++K G+L A R F + ++ + +++ Y +G
Sbjct: 123 -------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG 169
Query: 277 WFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKGMG------- 329
+ ++AL F E+ + ITL TVL +CA L L+ GK +H QI+ G+
Sbjct: 170 YAEEALRLFK---ELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNS 226
Query: 330 ------------------------PEYDYLGPALIEFYAECGKMSECEKVIHAIGERNIL 365
P+ D+ ALI YA CG+++E + R ++
Sbjct: 227 SLVNVYAKCGDLRMASYMLEQIREPD-DHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 366 SWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSLQLGLQIHGHV 425
WN +IS Y M EAL L +M+ DS ++A+ ++AC +G L+ G Q+H H
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 426 IKIDCKDEFV-QSSLIDMYSKCG--------FKNL-----------------------AY 453
K D+ V S+L+DMYSKCG F + A
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 454 LLFERIQQKSVVMWNSMICGFYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIG 513
+FERI+ KS++ WNSM GF QNG ++E + FHQM+ L DEV+ + I AC++I
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 514 QLEKGKWVHHKLISYGVRKDIYIDTALTDMYAKCGDLQTAQRVFDSMSERNVVSWSAMID 573
LE G+ V + G+ D + ++L D+Y KCG ++ +RVFD+M + + V W++MI
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 574 CYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFNAMRI-FGVE 632
Y +GQ +A LFK+M +GI+P ++TFM +L AC++ G VEEG+ F +M++ G
Sbjct: 525 GYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFV 584
Query: 633 PDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGSIWGALLNGCRIHKRIDVMKTIEKE 692
PD +H++CMVDLL+R+G +E A ++ MPF +GS+W ++L GC + + K ++
Sbjct: 585 PDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEK 644
Query: 693 LSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 739
+ ++ Y LS I+A G+W+ VR +M + K PG S
Sbjct: 645 IIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/628 (25%), Positives = 283/628 (45%), Gaps = 116/628 (18%)
Query: 3 LFRSCTNLRKLT---RLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEP 58
L +SC++ + T + + LL G L + L++ Y+ G + +R +FD +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 59 DSFMWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEK-V 117
+ F W +I+ YM SGEK
Sbjct: 92 NYFSWNTMIEGYM----------------------------------------NSGEKGT 111
Query: 118 HGRIIKCGFDKDDVIQTSILCTYGEFGCLDDARKVFDKMTSRDVVSWSSIIASYFDNADV 177
R ++D ++ + + G L AR++F+ M +DVV+ +S++ Y N
Sbjct: 112 SLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 178 SEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIHGHVLRRKIKIDGPLGNSF 237
E L++F + D +T+ ++ +AC EL +L+ + IH +L ++ D + +S
Sbjct: 172 EEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 238 IVMYSKCGDLLSAERTFVKIEK-------------------------------RCTTSWT 266
+ +Y+KCGDL A +I + RC W
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 267 AMISCYNRSGWFQKALESFVKML-EVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIR 325
+MIS Y + +AL F +M E +E+ TL V+ +C GLG+L GK +HC +
Sbjct: 289 SMISGYIANNMKMEALVLFNEMRNETREDSR--TLAAVINACIGLGFLETGKQMHCHACK 346
Query: 326 KGM------------------GP-----------EYD-YLGPALIEFYAECGKMSECEKV 355
G+ P YD L ++I+ Y CG++ + ++V
Sbjct: 347 FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRV 406
Query: 356 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 415
I ++++SWN + + +++ G + E LE QM L D S++S +SAC ++ SL
Sbjct: 407 FERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSL 466
Query: 416 QLGLQIHGH--VIKIDCKDEFVQSSLIDMYSKCGFKNLAYLLFERIQQKSVVMWNSMICG 473
+LG Q+ ++ +D D+ V SSLID+Y KCGF +F+ + + V WNSMI G
Sbjct: 467 ELGEQVFARATIVGLD-SDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 474 FYQNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKL-ISYGVRK 532
+ NG EAI+LF +M + + ++TF+ + AC+ G +E+G+ + + + +G
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 533 DIYIDTALTDMYAKCGDLQTAQRVFDSM 560
D + + D+ A+ G ++ A + + M
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEM 613
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/557 (23%), Positives = 226/557 (40%), Gaps = 138/557 (24%)
Query: 268 MISCYNRSGWFQKALESFVKMLEVKEEPNLITLITVLGSCAGLGWLREGKSVHCQIIRKG 327
MI YN S F + SF++ +EV + L L SC+ + + +++KG
Sbjct: 1 MILKYNSSYRFYLS-SSFLQAMEVDCRRYYVRL---LQSCSSRNRETLWRQTNGLLLKKG 56
Query: 328 MGPEYDYLGPALIEFYAECGKMSECEKVIHAIGERNILSWNMLISEYARKGMSKEAL--- 384
+ L++ Y+ GKM + + +RN SWN +I Y G +L
Sbjct: 57 FLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF 116
Query: 385 ----------------------ELLVQMQTWGLMP------------------------- 397
EL V + + MP
Sbjct: 117 DMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALR 176
Query: 398 ---------DSFSVASSLSACGNVGSLQLGLQIHGHVI--KIDCKDEFVQSSLIDMYSKC 446
D+ ++ + L AC + +L+ G QIH ++ ++C D + SSL+++Y+KC
Sbjct: 177 LFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC-DSKMNSSLVNVYAKC 235
Query: 447 G-FKNLAYL------------------------------LFERIQQKSVVMWNSMICGFY 475
G + +Y+ LF+R + V++WNSMI G+
Sbjct: 236 GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI 295
Query: 476 QNGNSLEAINLFHQMYLNCLEMDEVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIY 535
N +EA+ LF++M N D T I AC +G LE GK +H +G+ DI
Sbjct: 296 ANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV 354
Query: 536 IDTALTDMYAKCGD-------------------------------LQTAQRVFDSMSERN 564
+ + L DMY+KCG + A+RVF+ + ++
Sbjct: 355 VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS 414
Query: 565 VVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILWACSHSGSVEEGKFYFN 624
++SW++M + + +G + F QM + +EV+ +++ AC+ S+E G+ F
Sbjct: 415 LISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA 474
Query: 625 AMRIFGVEPDLQHYACMVDLLSRSGDIEGAFK----MIHSMPFPANGSIWGALLNGCRIH 680
I G++ D + ++DL + G +E + M+ S P N I G NG +
Sbjct: 475 RATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNG-QGF 533
Query: 681 KRIDVMKTIEKELSVTG 697
+ ID+ K++SV G
Sbjct: 534 EAIDLF----KKMSVAG 546
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 491 YLNCLEMD-EVTFLTAIQACSNIGQLEKGKWVHHKLISYGVRKDIYI-DTALTDMYAKCG 548
+L +E+D ++ +Q+CS+ + + + L+ G I I L MY++ G
Sbjct: 17 FLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSG 76
Query: 549 DLQTAQRVFDSMSERNVVSWSAMIDCYGMHGQLNDAASLFKQMLDSGIKPNEVTFMNILW 608
+ A+ +FD M +RN SW+ MI+ Y G+ + F M + + ++ ++
Sbjct: 77 KMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER----DGYSWNVVVS 132
Query: 609 ACSHSGSVEEGKFYFNAMRIFGVEPDLQHYACMVDLLSRSGDIEGAFKMIHSMPFPANGS 668
+ +G + + FNAM E D+ ++ +G E A ++ + F A+
Sbjct: 133 GFAKAGELSVARRLFNAMP----EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAI 188
Query: 669 IWGALLNGCRIHKRIDVMKTIEKELSVTGTN-DNGYYTLLSNIYAEEGN 716
+L C + + K I ++ + G D+ + L N+YA+ G+
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 6 SCTNLRKLTRLHAHLLVTGLHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSFMWAV 65
S ++L ++ A + GL D S+ LI+ Y + G + R VFDT + D W
Sbjct: 462 SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 66 LIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI-IKC 124
+I Y N E+I L+ KM + + VL AC+ G + G K+ + +
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 125 GFDKDDVIQTSILCTYGEFGCLDDARKVFDKMT-SRDVVSWSSIIASYFDNADVSEGLKM 183
GF D + ++ G +++A + ++M D WSSI+ N + G K
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 184 FHSMVREGVEPD 195
++ +EP+
Sbjct: 642 AEKIIE--LEPE 651
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 271,658,235
Number of Sequences: 539616
Number of extensions: 11093040
Number of successful extensions: 35044
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 24060
Number of HSP's gapped (non-prelim): 2912
length of query: 741
length of database: 191,569,459
effective HSP length: 125
effective length of query: 616
effective length of database: 124,117,459
effective search space: 76456354744
effective search space used: 76456354744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)