Query 004633
Match_columns 741
No_of_seqs 409 out of 2883
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 17:47:12 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004633.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1933-1937//hhsearch_pdb/004633hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 475.5 23.3 264 353-626 31-303 (311)
2 4fie_A Serine/threonine-protei 1.0 1 1 471.4 28.5 256 352-621 149-408 (423)
3 4b9d_A Serine/threonine-protei 1.0 1 1 469.7 25.8 258 353-620 23-283 (350)
4 4fih_A Serine/threonine-protei 1.0 1 1 469.2 26.6 255 353-621 73-331 (346)
5 3ubd_A Ribosomal protein S6 ki 1.0 1 1 459.7 18.9 261 353-624 23-292 (304)
6 3hyh_A Carbon catabolite-derep 1.0 1 1 459.7 24.4 257 353-619 12-268 (275)
7 3v5w_A G-protein coupled recep 1.0 1 1 457.0 23.5 267 351-625 186-461 (689)
8 3uto_A Twitchin; kinase, muscl 1.0 1 1 452.8 28.1 260 353-624 156-421 (573)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 447.4 24.4 251 352-620 56-329 (336)
10 4b99_A Mitogen-activated prote 1.0 1 1 446.7 28.0 259 352-621 52-352 (398)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=475.52 Aligned_cols=264 Identities=26% Similarity=0.500 Sum_probs=237.0
Q ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCEEE
Q ss_conf 99907814882329769999998789947999996218999551999999999999994169987364034056356589
Q 004633 353 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 432 (741)
Q Consensus 353 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~ 432 (741)
.++|+++++||+|+||+||+|+++.+++.||||++..... ......+.+.+|+++|+.|+|||||++++++.+++.+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~y 108 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY 108 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC--CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 5236898898316484999999999998999999888887--79789999999999998679989891999997389899
Q ss_pred EEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCC--
Q ss_conf 999522898700244201566438999999999999999999699031457776648668994799302630101375--
Q 004633 433 IYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGL-- 510 (741)
Q Consensus 433 LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~~~~~~-- 510 (741)
||||||+||+|.++|.+. +.++|.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 109 ivmEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 109 FGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp EEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC
T ss_conf 999648998999999874-9999999999999999999999988782687878996985898889987687502577877
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH
Q ss_conf -5333457999998769999853139999899310146678999999629999999982789999850699999559999
Q 004633 511 -SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIPEMLSSE 589 (741)
Q Consensus 511 -~~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~~iP~~ls~e 589 (741)
....+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+.+..+++.++......+|..++++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~-------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~ 260 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTE-------KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK 260 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHH-------SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHH
T ss_pred CCCCCCCCCCCCCCCHHHHCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 654367556803079989768-------9999689899899999999749899899799999999971999999656999
Q ss_pred HHHHHHHHHHCCCCCCCCHHH------HHCCCCCCCCCCCCCC
Q ss_conf 999999940019999999999------9809354245557888
Q 004633 590 GKDFLLRCFLRNPVERPSAVE------LLEHPFIRNANYQNLS 626 (741)
Q Consensus 590 l~dLI~~mL~~DP~kRPTa~E------iLqHpff~~~~~~~l~ 626 (741)
+++||.+||.+||++|+|+.| +++||||+..+|..+.
T Consensus 261 ~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~ 303 (311)
T 4aw0_A 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 303 (311)
T ss_dssp HHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGG
T ss_pred HHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHC
T ss_conf 9999999762897578096797587798779875898989940
No 2
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=471.44 Aligned_cols=256 Identities=35% Similarity=0.580 Sum_probs=228.3
Q ss_pred CCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCEE
Q ss_conf 99990781488232976999999878994799999621899955199999999999999416998736403405635658
Q 004633 352 KKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHL 431 (741)
Q Consensus 352 ~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~~l 431 (741)
....|+++++||+|+||+||+|+++.+|+.||||++....... .+.+.+|+.+|+.|+|||||++++++.+++.+
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~ 223 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 223 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred HHHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHH-----HHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 2684386169624818489999999999899999986255468-----99999999999857998987168999989999
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCC-
Q ss_conf 9999522898700244201566438999999999999999999699031457776648668994799302630101375-
Q 004633 432 YIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGL- 510 (741)
Q Consensus 432 ~LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~~~~~~- 510 (741)
|||||||+||+|.+++.. ..+++.+++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+.+...
T Consensus 224 ~iVmEy~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp EEEEECCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred EEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCC
T ss_conf 999969899828988761--698999999999999999999998890446578777898589998980372654777887
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC---CCCCCCC
Q ss_conf 5333457999998769999853139999899310146678999999629999999982789999850699---9995599
Q 004633 511 SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTP---PIPEMLS 587 (741)
Q Consensus 511 ~~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~---~iP~~ls 587 (741)
....+.+||++|||||++. ...|+.++|||||||++|||++|+.||.+.+..+.+..+..... ..+..++
T Consensus 302 ~~~~~~~GTp~YmAPEvl~-------~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s 374 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPELIS-------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS 374 (423)
T ss_dssp CCBCCCEECTTTCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSC
T ss_pred CCCCCCCCCCCCCCHHHHC-------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 6434666474727999977-------999996899999999999999787998986999999999727998876501299
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 9999999994001999999999998093542455
Q 004633 588 SEGKDFLLRCFLRNPVERPSAVELLEHPFIRNAN 621 (741)
Q Consensus 588 ~el~dLI~~mL~~DP~kRPTa~EiLqHpff~~~~ 621 (741)
+++++||.+||.+||++|+|+.|+|+||||+...
T Consensus 375 ~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 375 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 9999999998678956890999996098756899
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=469.69 Aligned_cols=258 Identities=29% Similarity=0.500 Sum_probs=231.6
Q ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCEEE
Q ss_conf 99907814882329769999998789947999996218999551999999999999994169987364034056356589
Q 004633 353 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 432 (741)
Q Consensus 353 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~ 432 (741)
.++|++++.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+.+|+.|+|||||++++++.+++.+|
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~y 99 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM---SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC---CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEE
T ss_conf 1255884797027793999999889998999999865878---9799999999999998779989891999999899999
Q ss_pred EEEEECCCCCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCCC
Q ss_conf 999522898700244201-5664389999999999999999996990314577766486689947993026301013755
Q 004633 433 IYLEYVHPGSINRYVREH-CRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGLS 511 (741)
Q Consensus 433 LVmEy~~gGsL~~~L~~~-~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~~~~~~~ 511 (741)
||||||+||+|.++|... ...++|.+++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+....
T Consensus 100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCCC
T ss_conf 99948899839999997389999789999999999999999998991513597899798789998976465214406885
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCHH
Q ss_conf -33345799999876999985313999989931014667899999962999999998278999985069-9999559999
Q 004633 512 -YELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRT-PPIPEMLSSE 589 (741)
Q Consensus 512 -~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~-~~iP~~ls~e 589 (741)
...+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+.+..+.+.++.... ++++..++++
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~-------~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~ 252 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICEN-------KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYD 252 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTT-------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHH
T ss_pred CCCCCCCCCCCCCCHHHHCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 41014578836039999879-------99895999999999999999787998996999999999808999997557999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 9999999400199999999999809354245
Q 004633 590 GKDFLLRCFLRNPVERPSAVELLEHPFIRNA 620 (741)
Q Consensus 590 l~dLI~~mL~~DP~kRPTa~EiLqHpff~~~ 620 (741)
+++||.+||.+||++|||+.|+|+||||+..
T Consensus 253 ~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 253 LRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 9999999855896679089999639976167
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=469.16 Aligned_cols=255 Identities=35% Similarity=0.583 Sum_probs=227.7
Q ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCEEE
Q ss_conf 99907814882329769999998789947999996218999551999999999999994169987364034056356589
Q 004633 353 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 432 (741)
Q Consensus 353 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~ 432 (741)
...|+++++||+|+||+||+|+++.+|+.||||++....... .+.+.+|+.+|+.++|||||++++++.+++.+|
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ 147 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGDELW 147 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-----GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHH-----HHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEE
T ss_conf 575387079602728299999998999899999985276568-----999999999998679989991999999899999
Q ss_pred EEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCC-C
Q ss_conf 999522898700244201566438999999999999999999699031457776648668994799302630101375-5
Q 004633 433 IYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGL-S 511 (741)
Q Consensus 433 LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~~~~~~-~ 511 (741)
||||||+||+|.+++.+ ..+++.+++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+... .
T Consensus 148 ivmEy~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 148 VVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp EEECCCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred EEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCC
T ss_conf 99969899808999871--8989999999999999999999988835562788997887999889902757536678877
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC---CCCCCCCH
Q ss_conf 333457999998769999853139999899310146678999999629999999982789999850699---99955999
Q 004633 512 YELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTP---PIPEMLSS 588 (741)
Q Consensus 512 ~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~---~iP~~ls~ 588 (741)
...+.+||+.|||||++. ...|+.++|||||||+||||++|++||.+.+..+.+..+..... ..+..+++
T Consensus 226 ~~~~~~GTp~YmAPEvl~-------~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~ 298 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELIS-------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP 298 (346)
T ss_dssp CBCCCCSCGGGCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCH
T ss_pred CCCCCCCCCCCCCHHHHC-------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf 534656275827999977-------9999968999999999999997879989859999999997179998875022999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 999999994001999999999998093542455
Q 004633 589 EGKDFLLRCFLRNPVERPSAVELLEHPFIRNAN 621 (741)
Q Consensus 589 el~dLI~~mL~~DP~kRPTa~EiLqHpff~~~~ 621 (741)
++++||.+||.+||++|||+.|+|+||||+...
T Consensus 299 ~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 299 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 999999998679956890999996098656899
No 5
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=459.67 Aligned_cols=261 Identities=28% Similarity=0.448 Sum_probs=231.8
Q ss_pred CCCEEEEEEEEECCCEEEEEEEEC---CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECC
Q ss_conf 999078148823297699999987---89947999996218999551999999999999994169987364034056356
Q 004633 353 KSQWQKGKLIGRGTFGSVYIGTNR---ETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDD 429 (741)
Q Consensus 353 ~~~Y~i~k~LG~GsfG~Vy~a~~k---~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~ 429 (741)
.++|++++.||+|+||+||+|++. .+++.||+|++......... ..++.+|+.+|+.++|||||++++++.+++
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD---RVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE---CC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHH---HHHHHHHHHHHHHCCCCCCCEEEEEEEECC
T ss_conf 55658988972188839999998558878979999998157768478---999999999998779979990999999899
Q ss_pred EEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCC
Q ss_conf 58999952289870024420156643899999999999999999969903145777664866899479930263010137
Q 004633 430 HLYIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTG 509 (741)
Q Consensus 430 ~l~LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~~~~~ 509 (741)
.+|||||||+||+|.++|.+. +.+++.+++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCC
T ss_conf 999999757998889999755-9999999999999999999999977995888878995786899887623663433268
Q ss_pred -CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCH
Q ss_conf -5533345799999876999985313999989931014667899999962999999998278999985069999955999
Q 004633 510 -LSYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIPEMLSS 588 (741)
Q Consensus 510 -~~~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~~iP~~ls~ 588 (741)
.....+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+.+..+.+.++......+|..+++
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~-------~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~ 251 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNR-------RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHT-------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCH
T ss_pred CCCCCCCCCCCCCCCCHHHHCC-------CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCH
T ss_conf 8763045441815079999656-------887877763611999999985989989849999999997189999876899
Q ss_pred HHHHHHHHHHHCCCCCCCC-----HHHHHCCCCCCCCCCCC
Q ss_conf 9999999940019999999-----99998093542455578
Q 004633 589 EGKDFLLRCFLRNPVERPS-----AVELLEHPFIRNANYQN 624 (741)
Q Consensus 589 el~dLI~~mL~~DP~kRPT-----a~EiLqHpff~~~~~~~ 624 (741)
++++||.+||.+||++|+| ++|+++||||+..+|..
T Consensus 252 ~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~ 292 (304)
T 3ubd_A 252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNK 292 (304)
T ss_dssp HHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHH
T ss_pred HHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHH
T ss_conf 99999999864698787999867899997690403789999
No 6
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=459.65 Aligned_cols=257 Identities=28% Similarity=0.486 Sum_probs=233.1
Q ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCEEE
Q ss_conf 99907814882329769999998789947999996218999551999999999999994169987364034056356589
Q 004633 353 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 432 (741)
Q Consensus 353 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~ 432 (741)
.++|++++.||+|+||+||+|+++.+|+.||+|++..... ......+++.+|+.+|+.++|||||++++++.+++.+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ 89 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL--AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII 89 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred EECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC--CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 3386899998217681999999999998999999837886--78789999999999998779989992999999899899
Q ss_pred EEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCCCCC
Q ss_conf 99952289870024420156643899999999999999999969903145777664866899479930263010137553
Q 004633 433 IYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGLSY 512 (741)
Q Consensus 433 LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~~~~~~~~ 512 (741)
|||||| +|+|.+++.++ +.+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus 90 ivmEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 90 MVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEEECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EEEECC-CCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC
T ss_conf 999278-99789999874-9999999999999999999999988930666875876887999899945477726678874
Q ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 33457999998769999853139999899310146678999999629999999982789999850699999559999999
Q 004633 513 ELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIPEMLSSEGKD 592 (741)
Q Consensus 513 ~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~~iP~~ls~el~d 592 (741)
..+.+||+.|||||++.+ ..+++.++|||||||++|||++|+.||.+.+.......+......+|..+++++++
T Consensus 168 ~~~~~GT~~Y~APE~~~~------~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISG------KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSS------SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHH
T ss_pred CCCEEECCCCCCHHHHCC------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 677028935277455068------98889836568789999999988799899899999999974999998779999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHCCCCCCC
Q ss_conf 999940019999999999980935424
Q 004633 593 FLLRCFLRNPVERPSAVELLEHPFIRN 619 (741)
Q Consensus 593 LI~~mL~~DP~kRPTa~EiLqHpff~~ 619 (741)
||.+||.+||++|||+.|+|+||||+.
T Consensus 242 li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred HHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 999986589668919999971920065
No 7
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=457.00 Aligned_cols=267 Identities=25% Similarity=0.383 Sum_probs=229.8
Q ss_pred CCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCC-CCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECC
Q ss_conf 7999907814882329769999998789947999996218999-551999999999999994169987364034056356
Q 004633 351 PKKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDD-PKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDD 429 (741)
Q Consensus 351 ~~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~-~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~ 429 (741)
...++|+++++||+|+||+||+|+++.+|+.||||++...... ............++.++..++|||||+++++|.+++
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC
T ss_conf 95689288889831648399999999999899999975788252556899999999999996489998717999999899
Q ss_pred EEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCHHCCC
Q ss_conf 58999952289870024420156643899999999999999999969903145777664866899479930263010137
Q 004633 430 HLYIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTG 509 (741)
Q Consensus 430 ~l~LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~~~~~ 509 (741)
.+|||||||.||+|.++|.+. +.+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+.+..
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECCC
T ss_conf 889999468998299999866-9999999999999999999999978854168866875980899889645655666378
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC---CHHHHHHHHCCCCCCCCCC
Q ss_conf 5533345799999876999985313999989931014667899999962999999998---2789999850699999559
Q 004633 510 LSYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFE---GPQAMFKVLNRTPPIPEML 586 (741)
Q Consensus 510 ~~~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~---~~~~l~ki~~~~~~iP~~l 586 (741)
. ...+.+||+.|||||++.+ +..|+.++|||||||+||||++|++||.+.. ...+...+......+|..+
T Consensus 345 ~-~~~t~~GTp~YmAPEvl~~------~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~ 417 (689)
T 3v5w_A 345 K-KPHASVGTHGYMAPEVLQK------GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417 (689)
T ss_dssp C-CCCSCCSCGGGCCHHHHST------TCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTS
T ss_pred C-CCCCCCCCCCCCCHHHHHC------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9-8777657867318899847------99999599999999999999868799999986779999985057988887669
Q ss_pred CHHHHHHHHHHHHCCCCCCCC-----HHHHHCCCCCCCCCCCCC
Q ss_conf 999999999940019999999-----999980935424555788
Q 004633 587 SSEGKDFLLRCFLRNPVERPS-----AVELLEHPFIRNANYQNL 625 (741)
Q Consensus 587 s~el~dLI~~mL~~DP~kRPT-----a~EiLqHpff~~~~~~~l 625 (741)
++++++||.+||.+||.+|++ +.|+++||||+..+|..+
T Consensus 418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l 461 (689)
T 3v5w_A 418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV 461 (689)
T ss_dssp CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHH
T ss_pred CHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHH
T ss_conf 99999999997608986879998889999966915047898899
No 8
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=452.84 Aligned_cols=260 Identities=25% Similarity=0.416 Sum_probs=233.6
Q ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCEEE
Q ss_conf 99907814882329769999998789947999996218999551999999999999994169987364034056356589
Q 004633 353 KSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLY 432 (741)
Q Consensus 353 ~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~~l~ 432 (741)
.++|++++.||+|+||+||+|+++.+|+.||+|++... .....+.+.+|+.+|+.|+|||||++++++.+++.+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE
T ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECC-----CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 53618988996164849999999889989999999152-----4205999999999998689989894999999899889
Q ss_pred EEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCC--CCEEEEECCCCHHCCCC
Q ss_conf 9995228987002442015664389999999999999999996990314577766486689--94799302630101375
Q 004633 433 IYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDAS--GVVKLADFGMAKHLTGL 510 (741)
Q Consensus 433 LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~--g~vKLiDFGLA~~~~~~ 510 (741)
||||||.||+|.++|.+....+++.+++.|++||+.||.|||+++|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCCC
T ss_conf 99860699959999998679999999999999999999999988923056876551214788897899406630685699
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC----CCC
Q ss_conf 5333457999998769999853139999899310146678999999629999999982789999850699999----559
Q 004633 511 SYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTPPIP----EML 586 (741)
Q Consensus 511 ~~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~~iP----~~l 586 (741)
....+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+.+..+.+..+......++ ..+
T Consensus 311 ~~~~~~~GT~~y~APEv~~~-------~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 383 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEG-------KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 383 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTT-------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTS
T ss_pred CCEEEEEECCCCCCHHHHCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 82323477945149999689-------99896999999999999999787997986999999999848999895324689
Q ss_pred CHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 99999999994001999999999998093542455578
Q 004633 587 SSEGKDFLLRCFLRNPVERPSAVELLEHPFIRNANYQN 624 (741)
Q Consensus 587 s~el~dLI~~mL~~DP~kRPTa~EiLqHpff~~~~~~~ 624 (741)
++++++||.+||.+||.+|||+.|+|+||||+...+..
T Consensus 384 s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~ 421 (573)
T 3uto_A 384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 421 (573)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred CHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCC
T ss_conf 99999999988648956892999995395748798987
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=447.40 Aligned_cols=251 Identities=28% Similarity=0.472 Sum_probs=220.7
Q ss_pred CCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCEE
Q ss_conf 99990781488232976999999878994799999621899955199999999999999416998736403405635658
Q 004633 352 KKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHL 431 (741)
Q Consensus 352 ~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~~~~l 431 (741)
....|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+|+.|+|||||++++++.+++.+
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~~~ 125 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGPWV 125 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETTEE
T ss_pred CHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH----------HHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 53351768685138780999999889998999999788886----------99999999857998999399999989999
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCC-CEEEEECCCCHHCCCC
Q ss_conf 999952289870024420156643899999999999999999969903145777664866899-4799302630101375
Q 004633 432 YIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASG-VVKLADFGMAKHLTGL 510 (741)
Q Consensus 432 ~LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g-~vKLiDFGLA~~~~~~ 510 (741)
|||||||+||+|.++|++. +.+++..++.|+.||+.||.|||+++|+||||||+||||+.+| .+||+|||+|+.+...
T Consensus 126 ~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp EEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred EEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCC
T ss_conf 9999665998699999876-999999999999999999999998890426167788799589997999627877685678
Q ss_pred CC------CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC---C
Q ss_conf 53------33457999998769999853139999899310146678999999629999999982789999850699---9
Q 004633 511 SY------ELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTP---P 581 (741)
Q Consensus 511 ~~------~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~---~ 581 (741)
.. ...++||+.|||||++.+ ..|+.++|||||||+||||++|+.||.+......+.++....+ .
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~-------~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 277 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMG-------KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIRE 277 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTT-------CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGG
T ss_pred CCCCCEECCCCCCCCCCCCCHHHHCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHH
T ss_conf 76540221785455802008999889-------99890899999999999999786998998999999999808998002
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH-------------CCCCCCCC
Q ss_conf 9955999999999994001999999999998-------------09354245
Q 004633 582 IPEMLSSEGKDFLLRCFLRNPVERPSAVELL-------------EHPFIRNA 620 (741)
Q Consensus 582 iP~~ls~el~dLI~~mL~~DP~kRPTa~EiL-------------qHpff~~~ 620 (741)
++..+++++++||.+||.+||.+|||+.|++ +|||+...
T Consensus 278 ~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 278 IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 5866799999999997628976895999999999999754432169876777
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=446.68 Aligned_cols=259 Identities=27% Similarity=0.415 Sum_probs=222.2
Q ss_pred CCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEE----
Q ss_conf 9999078148823297699999987899479999962189995519999999999999941699873640340563----
Q 004633 352 KKSQWQKGKLIGRGTFGSVYIGTNRETGASCAIKEVDIIPDDPKSAECIKQLEQEIKVLGHLKHENIVQYYGSEVV---- 427 (741)
Q Consensus 352 ~~~~Y~i~k~LG~GsfG~Vy~a~~k~tg~~vAIK~i~~~~~~~~~~~~ik~l~~Ei~iL~~L~HPNIVkl~g~~~~---- 427 (741)
..++|++++.||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+.+|+.|+|||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 128 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF---DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 128 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC---CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
T ss_conf 7897489889842608499999998999899999987400---3468899999999999866799954176555203554
Q ss_pred --CCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEECCCCH
Q ss_conf --565899995228987002442015664389999999999999999996990314577766486689947993026301
Q 004633 428 --DDHLYIYLEYVHPGSINRYVREHCRDITESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAK 505 (741)
Q Consensus 428 --~~~l~LVmEy~~gGsL~~~L~~~~~~lse~~i~~I~~QIl~gL~yLHs~gIVHRDIKP~NILId~~g~vKLiDFGLA~ 505 (741)
.+.+|||||||+ |+|.+++.+. +.+++..++.|++||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus 129 ~~~~~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 129 GEFKSVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CCCCEEEEEEECCC-CCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEE
T ss_conf 66887999983799-9889999865-999999999999999999999998867678737133542788877872214342
Q ss_pred HCCC-----CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 0137-----55333457999998769999853139999899310146678999999629999999982789999850699
Q 004633 506 HLTG-----LSYELSLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFKVLNRTP 580 (741)
Q Consensus 506 ~~~~-----~~~~~t~~GT~~Y~APEvl~~~~~~~g~~~~t~asDIWSLGiILyELLtGk~PF~~~~~~~~l~ki~~~~~ 580 (741)
.+.. .....+.+||++|||||++.+ ..+|+.++||||+||++|||++|++||.+.+..+.+..|.....
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~------~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g 280 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLS------LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTT------CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHC
T ss_pred ECCCCCCCCCCCCCCCEECHHHCCHHHHCC------CCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 134675456666566255867648787627------88899722211168999999978899898898999999997038
Q ss_pred CC-------------------------------CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 99-------------------------------955999999999994001999999999998093542455
Q 004633 581 PI-------------------------------PEMLSSEGKDFLLRCFLRNPVERPSAVELLEHPFIRNAN 621 (741)
Q Consensus 581 ~i-------------------------------P~~ls~el~dLI~~mL~~DP~kRPTa~EiLqHpff~~~~ 621 (741)
.. ...+++++++||.+||..||.+|+|+.|+|+||||+...
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 998677633100234555530787688788985879999999999997749955791899996597238688
Done!