Query 004635
Match_columns 740
No_of_seqs 265 out of 637
Neff 6.8
Searched_HMMs 13730
Date Tue Mar 26 18:24:30 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004635.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1933-1937//hhsearch_scop/004635hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hx0a1 b.71.1.1 (A:404-496) A 9.4 31 0.0022 9.9 1.3 25 564-588 3-29 (93)
2 d1jaea1 b.71.1.1 (A:379-471) A 7.5 42 0.0031 9.0 1.5 26 563-588 3-30 (93)
3 d1g94a1 b.71.1.1 (A:355-448) B 7.3 44 0.0032 8.9 1.1 27 562-588 2-30 (94)
4 d1v54d_ f.23.1.1 (D:) Mitochon 4.3 85 0.0062 7.1 3.1 30 542-571 107-138 (144)
5 d1f1sa1 a.102.3.2 (A:249-619) 4.3 86 0.0063 7.0 0.0 10 72-81 20-29 (371)
6 d1ppqa_ g.18.1.1 (A:) Compleme 4.0 94 0.0069 6.8 1.0 35 558-592 24-60 (68)
7 d1quba2 g.18.1.1 (A:63-120) be 3.7 95 0.0069 6.7 -0.2 33 559-592 20-52 (58)
8 d1vk6a3 d.113.1.4 (A:0-96) NAD 3.5 1.1E+02 0.0081 6.3 0.3 19 569-587 10-28 (97)
9 d1llfa_ c.69.1.17 (A:) Type-B 3.0 1.3E+02 0.0097 5.8 1.5 12 546-557 181-192 (534)
10 d1p0ia_ c.69.1.1 (A:) Butyryl 2.9 1.4E+02 0.0098 5.8 1.5 12 546-557 167-178 (526)
No 1
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=9.44 E-value=31 Score=9.89 Aligned_cols=25 Identities=48% Similarity=0.893 Sum_probs=18.7
Q ss_pred EEEECCCC-CHHH-EECCCEEEECCCC
Q ss_conf 68815662-1112-0038301004998
Q 004635 564 VMSWWDYG-YQIT-AMGNRTVIVDNNT 588 (740)
Q Consensus 564 VmSWWDYG-Y~It-~~a~RttlaDnnt 588 (740)
|--|||-| +||. .-++|.=+|=||.
T Consensus 3 v~nWwdng~nqIAF~RG~kGFvAiNn~ 29 (93)
T d1hx0a1 3 FANWWDNGSNQVAFGRGNRGFIVFNND 29 (93)
T ss_dssp EEEEEECSSSEEEEEETTTEEEEEECS
T ss_pred CCCEEECCCCEEEEECCCCCEEEEECC
T ss_conf 566285899589991599748999599
No 2
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]}
Probab=7.49 E-value=42 Score=9.04 Aligned_cols=26 Identities=27% Similarity=0.598 Sum_probs=18.2
Q ss_pred EEEEECCCC-CHHH-EECCCEEEECCCC
Q ss_conf 168815662-1112-0038301004998
Q 004635 563 KVMSWWDYG-YQIT-AMGNRTVIVDNNT 588 (740)
Q Consensus 563 ~VmSWWDYG-Y~It-~~a~RttlaDnnt 588 (740)
.|--|||-| +||. .-++|.=+|=||.
T Consensus 3 ~v~nWwdng~nqIAF~RG~kGFvAiN~~ 30 (93)
T d1jaea1 3 QVENWWSNDDNQIAFSRGSQGFVAFTNG 30 (93)
T ss_dssp CEEEEEECSSSEEEEEETTTEEEEEESS
T ss_pred CCCCCEECCCCEEEEECCCCCEEEEECC
T ss_conf 4245588999579991599739999078
No 3
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=7.25 E-value=44 Score=8.92 Aligned_cols=27 Identities=30% Similarity=0.537 Sum_probs=18.4
Q ss_pred CEEEEECCCC-CHHH-EECCCEEEECCCC
Q ss_conf 9168815662-1112-0038301004998
Q 004635 562 AKVMSWWDYG-YQIT-AMGNRTVIVDNNT 588 (740)
Q Consensus 562 a~VmSWWDYG-Y~It-~~a~RttlaDnnt 588 (740)
-.|--|||-| +||. .-++|.=+|=||.
T Consensus 2 ~~v~nWwdng~nqIAF~RG~kGFvAiN~~ 30 (94)
T d1g94a1 2 WAVTNWWDNTNNQISFGRGSSGHMAINKE 30 (94)
T ss_dssp CCCEEEEECSSSEEEEECGGGEEEEEECS
T ss_pred CEEECCEECCCCEEEEECCCCCEEEEECC
T ss_conf 50333377899579992599748999399
No 4
>d1v54d_ f.23.1.1 (D:) Mitochondrial cytochrome c oxidase subunit IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.31 E-value=85 Score=7.07 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=21.7
Q ss_pred CCCHHHHHHHH-H-HHHCCCCCCEEEEECCCC
Q ss_conf 34636999999-9-883599999168815662
Q 004635 542 VIFDDYREAYF-W-LRQNTPPDAKVMSWWDYG 571 (740)
Q Consensus 542 ~i~dDw~eAl~-W-Lr~NTp~da~VmSWWDYG 571 (740)
.++++|+|+-. . +.+|..+=..+-|=|||-
T Consensus 107 T~~~Ewqeaq~erm~~~~~nPitG~SSkwDYe 138 (144)
T d1v54d_ 107 TFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYD 138 (144)
T ss_dssp GGSHHHHHHHHHHHHHTTSSTTTTSGGGEETT
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 88999999999999982789987720323410
No 5
>d1f1sa1 a.102.3.2 (A:249-619) Hyaluronate lyase {Streptococcus agalactiae [TaxId: 1311]}
Probab=4.26 E-value=86 Score=7.03 Aligned_cols=10 Identities=10% Similarity=0.139 Sum_probs=5.0
Q ss_pred CCCCCCHHHH
Q ss_conf 6777835799
Q 004635 72 MIHEFDPYFN 81 (740)
Q Consensus 72 ~i~~~Dpyy~ 81 (740)
.+...||...
T Consensus 20 ~~d~~d~~~~ 29 (371)
T d1f1sa1 20 VYDTNDSNMQ 29 (371)
T ss_dssp GCCTTCHHHH
T ss_pred CCCCCCHHHH
T ss_conf 6786677899
No 6
>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.96 E-value=94 Score=6.77 Aligned_cols=35 Identities=11% Similarity=0.282 Sum_probs=25.3
Q ss_pred CCCCCEEEEECCCCCHHHEECCCEEEECCC--CCCCC
Q ss_conf 999991688156621112003830100499--88862
Q 004635 558 TPPDAKVMSWWDYGYQITAMGNRTVIVDNN--TWNNT 592 (740)
Q Consensus 558 Tp~da~VmSWWDYGY~It~~a~RttlaDnn--t~n~t 592 (740)
+.-.+++.===|-||.+.+-+.|+-..||+ +|++.
T Consensus 24 ~~~gs~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~ 60 (68)
T d1ppqa_ 24 IQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60 (68)
T ss_dssp SCTTCCCEEEESTTCCBSSCSCCCEEECSSSEEESSC
T ss_pred CCCCCEEEEEECCCCEECCCCCEEEECCCCCCEECCC
T ss_conf 5659999998389968948980798189998979899
No 7
>d1quba2 g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.69 E-value=95 Score=6.74 Aligned_cols=33 Identities=6% Similarity=0.192 Sum_probs=24.4
Q ss_pred CCCCEEEEECCCCCHHHEECCCEEEECCCCCCCC
Q ss_conf 9999168815662111200383010049988862
Q 004635 559 PPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNT 592 (740)
Q Consensus 559 p~da~VmSWWDYGY~It~~a~RttlaDnnt~n~t 592 (740)
.-.++|-=-=|-||.+.+-..|+-..| .+|+++
T Consensus 20 ~~g~~v~y~C~~Gy~l~G~~~~~C~~~-g~Ws~~ 52 (58)
T d1quba2 20 EYPNTISFSCNTGFYLNGADSAKCTEE-GKWSPE 52 (58)
T ss_dssp BTTCEEEEEECTTEEEESCSEEEECTT-SCEESC
T ss_pred CCCCEEEEECCCCCEECCCCCEEECCC-CEECCC
T ss_conf 469999998299989849999598999-969999
No 8
>d1vk6a3 d.113.1.4 (A:0-96) NADH pyrophosphatase {Escherichia coli [TaxId: 562]}
Probab=3.46 E-value=1.1e+02 Score=6.32 Aligned_cols=19 Identities=11% Similarity=0.263 Sum_probs=14.0
Q ss_pred CCCCHHHEECCCEEEECCC
Q ss_conf 6621112003830100499
Q 004635 569 DYGYQITAMGNRTVIVDNN 587 (740)
Q Consensus 569 DYGY~It~~a~RttlaDnn 587 (740)
|+|||+-.-+++.-+.||+
T Consensus 10 d~g~W~v~~~~~L~L~~g~ 28 (97)
T d1vk6a3 10 DHGWWVVSHEQKLWLPKGE 28 (97)
T ss_dssp CEEEEEEEETTEEECGGGS
T ss_pred CCEEEEEEECCEEEEECCC
T ss_conf 6269999959989861899
No 9
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]}
Probab=2.99 E-value=1.3e+02 Score=5.81 Aligned_cols=12 Identities=33% Similarity=0.631 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHC
Q ss_conf 699999998835
Q 004635 546 DYREAYFWLRQN 557 (740)
Q Consensus 546 Dw~eAl~WLr~N 557 (740)
|-+.|++|+|+|
T Consensus 181 Dq~~AL~WV~~n 192 (534)
T d1llfa_ 181 DQRLGMQWVADN 192 (534)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 778899988765
No 10
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.94 E-value=1.4e+02 Score=5.76 Aligned_cols=12 Identities=33% Similarity=0.675 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHC
Q ss_conf 699999998835
Q 004635 546 DYREAYFWLRQN 557 (740)
Q Consensus 546 Dw~eAl~WLr~N 557 (740)
|-+.|++|.|+|
T Consensus 167 Dq~~AL~WV~~n 178 (526)
T d1p0ia_ 167 DQQLALQWVQKN 178 (526)
T ss_dssp HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 123554638977
Done!