Query 004642
Match_columns 740
No_of_seqs 712 out of 5744
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 02:43:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004642.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004642hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.1E-77 6.7E-82 724.3 50.6 430 271-725 506-954 (968)
2 KOG1187 Serine/threonine prote 100.0 4.7E-50 1E-54 423.3 23.6 281 437-723 62-353 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.6E-46 3.5E-51 393.0 23.4 256 452-722 43-303 (362)
4 KOG0581 Mitogen-activated prot 100.0 1.1E-46 2.4E-51 373.7 18.4 259 452-724 81-341 (364)
5 KOG0615 Serine/threonine prote 100.0 6.9E-47 1.5E-51 376.9 15.3 264 448-725 170-444 (475)
6 KOG0575 Polo-like serine/threo 100.0 5.8E-45 1.3E-49 381.8 21.0 257 450-724 18-275 (592)
7 KOG0591 NIMA (never in mitosis 100.0 4E-46 8.7E-51 353.3 8.2 260 450-721 19-284 (375)
8 KOG0197 Tyrosine kinases [Sign 100.0 6.8E-45 1.5E-49 378.0 17.2 253 450-722 206-461 (468)
9 KOG0598 Ribosomal protein S6 k 100.0 7.1E-45 1.5E-49 360.8 16.3 255 449-720 24-283 (357)
10 KOG0595 Serine/threonine-prote 100.0 3.8E-44 8.3E-49 358.2 19.6 202 449-658 9-217 (429)
11 KOG0593 Predicted protein kina 100.0 6.7E-44 1.4E-48 341.6 14.3 264 450-720 2-286 (396)
12 KOG0592 3-phosphoinositide-dep 100.0 2.2E-42 4.8E-47 356.0 17.1 259 449-725 72-345 (604)
13 KOG1026 Nerve growth factor re 100.0 3.7E-42 7.9E-47 374.7 18.7 260 449-724 485-764 (774)
14 KOG0659 Cdk activating kinase 100.0 1.1E-41 2.5E-46 321.2 18.4 281 450-737 2-300 (318)
15 KOG0198 MEKK and related serin 100.0 5.9E-42 1.3E-46 347.3 15.9 257 450-723 17-281 (313)
16 KOG0193 Serine/threonine prote 100.0 6.1E-42 1.3E-46 356.9 15.8 266 443-724 385-655 (678)
17 KOG0582 Ste20-like serine/thre 100.0 5.2E-41 1.1E-45 338.1 21.3 263 449-724 25-299 (516)
18 KOG0578 p21-activated serine/t 100.0 1.2E-41 2.5E-46 354.2 16.6 261 449-728 272-533 (550)
19 KOG0661 MAPK related serine/th 100.0 3E-42 6.4E-47 349.7 11.8 266 448-722 8-295 (538)
20 KOG0600 Cdc2-related protein k 100.0 1.9E-41 4.1E-46 346.4 17.6 268 450-724 117-406 (560)
21 KOG0616 cAMP-dependent protein 100.0 1.8E-40 4E-45 317.6 17.6 249 450-719 44-298 (355)
22 KOG0196 Tyrosine kinase, EPH ( 100.0 2E-41 4.4E-46 360.8 11.2 268 437-722 607-891 (996)
23 KOG0583 Serine/threonine prote 100.0 4.5E-40 9.8E-45 348.1 21.4 259 448-723 15-280 (370)
24 cd05102 PTKc_VEGFR3 Catalytic 100.0 5E-40 1.1E-44 351.4 21.7 260 448-722 5-334 (338)
25 KOG0597 Serine-threonine prote 100.0 9.4E-41 2E-45 343.6 13.5 252 450-721 2-254 (808)
26 KOG0201 Serine/threonine prote 100.0 4E-41 8.6E-46 339.1 10.2 255 449-722 12-267 (467)
27 KOG4721 Serine/threonine prote 100.0 5.3E-41 1.1E-45 345.1 10.3 242 455-724 129-370 (904)
28 cd05631 STKc_GRK4 Catalytic do 100.0 1.4E-39 3E-44 339.1 21.2 259 451-722 1-265 (285)
29 PHA02988 hypothetical protein; 100.0 2.7E-39 5.8E-44 336.2 23.2 248 456-722 26-279 (283)
30 KOG0588 Serine/threonine prote 100.0 4.9E-40 1.1E-44 345.4 16.9 256 450-724 12-269 (786)
31 KOG0663 Protein kinase PITSLRE 100.0 5.4E-40 1.2E-44 319.0 15.1 268 449-729 75-372 (419)
32 KOG0611 Predicted serine/threo 100.0 3.9E-40 8.5E-45 326.2 14.1 254 449-722 52-307 (668)
33 KOG0194 Protein tyrosine kinas 100.0 3.3E-40 7.2E-45 349.1 13.9 264 447-725 154-423 (474)
34 cd05571 STKc_PKB Catalytic dom 100.0 2E-39 4.4E-44 344.0 19.2 248 456-721 1-254 (323)
35 KOG0605 NDR and related serine 100.0 2.1E-39 4.5E-44 334.6 17.8 258 448-722 139-449 (550)
36 cd05612 STKc_PRKX_like Catalyt 100.0 2.6E-39 5.7E-44 338.1 18.5 252 450-722 1-258 (291)
37 KOG0589 Serine/threonine prote 100.0 8.3E-40 1.8E-44 339.4 14.0 254 450-719 4-259 (426)
38 cd05104 PTKc_Kit Catalytic dom 100.0 8E-39 1.7E-43 345.9 22.2 259 448-721 33-373 (375)
39 KOG1094 Discoidin domain recep 100.0 1.8E-39 4E-44 335.2 15.5 264 449-722 537-804 (807)
40 PTZ00263 protein kinase A cata 100.0 4.6E-39 9.9E-44 342.1 19.0 252 450-722 18-275 (329)
41 cd05096 PTKc_DDR1 Catalytic do 100.0 9E-39 1.9E-43 336.4 20.9 263 449-720 4-303 (304)
42 KOG3653 Transforming growth fa 100.0 6.1E-39 1.3E-43 325.4 18.3 267 450-727 210-508 (534)
43 KOG2052 Activin A type IB rece 100.0 1.1E-38 2.4E-43 321.1 20.0 265 447-724 208-505 (513)
44 KOG0580 Serine/threonine prote 100.0 1.3E-39 2.8E-44 303.0 12.2 256 449-722 21-277 (281)
45 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-38 2.3E-43 344.5 21.3 262 446-722 34-372 (374)
46 KOG2345 Serine/threonine prote 100.0 1.9E-39 4.2E-44 303.1 12.9 261 449-721 20-299 (302)
47 KOG1095 Protein tyrosine kinas 100.0 3.4E-39 7.5E-44 364.2 17.5 256 450-722 692-961 (1025)
48 cd05595 STKc_PKB_beta Catalyti 100.0 9.8E-39 2.1E-43 338.6 20.0 248 456-721 1-254 (323)
49 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.7E-39 1E-43 343.0 17.2 257 450-722 1-261 (333)
50 KOG0694 Serine/threonine prote 100.0 1E-38 2.2E-43 338.5 19.5 254 449-721 367-627 (694)
51 cd05585 STKc_YPK1_like Catalyt 100.0 8.9E-39 1.9E-43 337.5 19.0 246 458-721 1-250 (312)
52 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-38 2.9E-43 338.2 20.2 248 456-721 1-254 (328)
53 KOG0585 Ca2+/calmodulin-depend 100.0 6.5E-39 1.4E-43 324.8 16.6 260 448-723 95-377 (576)
54 PTZ00426 cAMP-dependent protei 100.0 1.2E-38 2.5E-43 339.6 19.2 253 449-722 29-288 (340)
55 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.2E-38 4.8E-43 330.6 20.8 261 450-718 5-285 (288)
56 cd05588 STKc_aPKC Catalytic do 100.0 2E-38 4.4E-43 337.1 20.5 255 456-721 1-265 (329)
57 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.9E-38 1.1E-42 324.1 22.6 254 450-721 5-264 (266)
58 cd06649 PKc_MEK2 Catalytic dom 100.0 5.6E-38 1.2E-42 334.2 23.3 266 449-725 4-308 (331)
59 cd05618 STKc_aPKC_iota Catalyt 100.0 2.6E-38 5.6E-43 336.1 20.6 254 456-720 1-264 (329)
60 KOG0610 Putative serine/threon 100.0 3.1E-38 6.7E-43 315.8 19.2 259 450-722 77-396 (459)
61 PLN00034 mitogen-activated pro 100.0 4.4E-38 9.6E-43 338.1 21.7 255 450-724 74-334 (353)
62 cd05589 STKc_PKN Catalytic dom 100.0 3.9E-38 8.5E-43 334.4 20.7 250 452-720 1-259 (324)
63 cd08228 STKc_Nek6 Catalytic do 100.0 9.6E-38 2.1E-42 322.2 23.0 262 450-722 2-265 (267)
64 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-38 2.3E-43 343.0 16.2 256 450-722 1-289 (350)
65 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.9E-38 1.5E-42 329.5 22.0 269 449-725 4-295 (303)
66 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-37 2.4E-42 319.7 22.7 250 450-719 4-255 (256)
67 cd05605 STKc_GRK4_like Catalyt 100.0 4E-38 8.7E-43 328.1 19.8 261 451-724 1-267 (285)
68 cd05594 STKc_PKB_alpha Catalyt 100.0 2.1E-38 4.6E-43 336.6 18.0 248 456-721 1-255 (325)
69 PF07714 Pkinase_Tyr: Protein 100.0 2.6E-38 5.7E-43 324.6 17.5 249 454-719 3-259 (259)
70 cd05584 STKc_p70S6K Catalytic 100.0 5E-38 1.1E-42 333.4 20.2 248 456-721 2-259 (323)
71 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-37 2.5E-42 324.5 22.6 256 450-721 5-282 (283)
72 cd05587 STKc_cPKC Catalytic do 100.0 5.8E-38 1.3E-42 333.1 20.6 251 451-719 1-258 (324)
73 cd05608 STKc_GRK1 Catalytic do 100.0 6.6E-38 1.4E-42 325.6 20.1 253 458-721 1-260 (280)
74 cd05590 STKc_nPKC_eta Catalyti 100.0 4.4E-38 9.5E-43 333.2 19.1 247 456-720 1-255 (320)
75 KOG1989 ARK protein kinase fam 100.0 3.5E-38 7.7E-43 345.5 18.6 255 449-722 36-311 (738)
76 cd07848 STKc_CDKL5 Catalytic d 100.0 6.5E-38 1.4E-42 327.1 19.9 262 450-718 1-284 (287)
77 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.7E-38 1.4E-42 332.8 20.2 254 456-720 1-262 (327)
78 cd05072 PTKc_Lyn Catalytic dom 100.0 1.4E-37 3E-42 319.8 22.0 254 449-721 5-260 (261)
79 cd05616 STKc_cPKC_beta Catalyt 100.0 6.5E-38 1.4E-42 332.6 20.1 250 451-718 1-257 (323)
80 cd05591 STKc_nPKC_epsilon Cata 100.0 5.4E-38 1.2E-42 332.9 19.1 248 456-721 1-257 (321)
81 cd05628 STKc_NDR1 Catalytic do 100.0 9.3E-38 2E-42 336.8 21.0 256 450-721 1-296 (363)
82 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.7E-37 3.6E-42 336.4 22.9 260 448-722 35-397 (400)
83 cd05592 STKc_nPKC_theta_delta 100.0 7.7E-38 1.7E-42 330.7 19.8 245 456-718 1-248 (316)
84 KOG0594 Protein kinase PCTAIRE 100.0 5.3E-38 1.1E-42 312.2 17.2 268 450-722 11-306 (323)
85 cd07862 STKc_CDK6 Catalytic do 100.0 1.2E-37 2.6E-42 325.6 20.9 262 450-718 1-287 (290)
86 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.4E-38 1.8E-42 334.4 20.1 263 451-721 1-293 (338)
87 KOG0660 Mitogen-activated prot 100.0 2.1E-38 4.5E-43 313.4 14.0 265 448-720 20-312 (359)
88 cd08229 STKc_Nek7 Catalytic do 100.0 1.8E-37 3.8E-42 320.2 21.6 261 450-721 2-264 (267)
89 cd05054 PTKc_VEGFR Catalytic d 100.0 1.2E-37 2.7E-42 331.7 21.0 260 448-722 5-333 (337)
90 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.2E-37 4.8E-42 317.3 22.1 251 450-720 4-256 (256)
91 cd05148 PTKc_Srm_Brk Catalytic 100.0 1E-37 2.2E-42 320.8 19.5 256 448-721 4-260 (261)
92 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-37 2.8E-42 337.7 21.3 256 451-722 2-309 (381)
93 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-37 2.9E-42 322.8 20.3 252 458-721 1-253 (277)
94 PHA03212 serine/threonine kina 100.0 2.7E-37 5.8E-42 334.7 23.4 259 449-723 91-381 (391)
95 cd05052 PTKc_Abl Catalytic dom 100.0 3.3E-37 7.2E-42 317.4 22.9 253 450-721 6-261 (263)
96 cd05068 PTKc_Frk_like Catalyti 100.0 4.4E-37 9.5E-42 316.1 23.8 254 449-721 5-260 (261)
97 cd05049 PTKc_Trk Catalytic dom 100.0 2.3E-37 5.1E-42 321.7 21.7 256 449-720 4-279 (280)
98 cd05599 STKc_NDR_like Catalyti 100.0 6.4E-38 1.4E-42 338.7 18.1 255 450-721 1-299 (364)
99 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-37 2.3E-42 330.0 19.4 247 456-720 1-254 (318)
100 KOG0599 Phosphorylase kinase g 100.0 1.4E-38 3E-43 300.4 11.0 257 450-721 17-286 (411)
101 cd05033 PTKc_EphR Catalytic do 100.0 4.7E-37 1E-41 316.9 23.6 256 449-722 3-265 (266)
102 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.8E-37 1.3E-41 316.3 24.2 262 450-722 2-265 (267)
103 cd06650 PKc_MEK1 Catalytic dom 100.0 2.8E-37 6E-42 328.8 22.4 265 449-724 4-305 (333)
104 KOG0033 Ca2+/calmodulin-depend 100.0 1.5E-39 3.3E-44 302.5 4.3 259 449-723 10-272 (355)
105 PRK13184 pknD serine/threonine 100.0 2.6E-37 5.6E-42 352.1 23.4 260 450-721 2-289 (932)
106 cd05062 PTKc_IGF-1R Catalytic 100.0 2.1E-37 4.6E-42 321.4 20.9 257 448-720 4-276 (277)
107 KOG0574 STE20-like serine/thre 100.0 1.4E-39 3E-44 310.8 4.0 254 450-722 33-287 (502)
108 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-37 2.7E-42 338.4 19.7 255 451-722 2-309 (382)
109 cd05108 PTKc_EGFR Catalytic do 100.0 3.3E-37 7.3E-42 326.2 22.1 254 450-722 7-268 (316)
110 cd05620 STKc_nPKC_delta Cataly 100.0 1.6E-37 3.5E-42 328.2 19.3 247 456-720 1-250 (316)
111 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-37 2.4E-42 338.2 18.5 256 450-722 1-309 (377)
112 cd05090 PTKc_Ror1 Catalytic do 100.0 4.9E-37 1.1E-41 319.8 22.6 256 450-721 5-282 (283)
113 cd06646 STKc_MAP4K5 Catalytic 100.0 2.6E-37 5.6E-42 319.0 20.3 255 449-719 8-266 (267)
114 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-37 2.7E-42 330.4 18.4 246 456-719 1-252 (323)
115 cd08529 STKc_FA2-like Catalyti 100.0 5.3E-37 1.1E-41 314.5 22.4 252 451-718 1-253 (256)
116 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-37 4.9E-42 326.9 20.0 245 456-718 1-248 (316)
117 cd05596 STKc_ROCK Catalytic do 100.0 1.7E-37 3.7E-42 334.9 19.2 259 448-721 41-307 (370)
118 cd05615 STKc_cPKC_alpha Cataly 100.0 2.7E-37 5.8E-42 327.6 20.2 250 451-718 1-257 (323)
119 PTZ00283 serine/threonine prot 100.0 1.9E-37 4E-42 345.3 19.8 258 447-719 29-298 (496)
120 PTZ00267 NIMA-related protein 100.0 3E-37 6.5E-42 343.6 21.4 252 450-718 67-323 (478)
121 KOG0658 Glycogen synthase kina 100.0 3.5E-38 7.5E-43 312.4 12.2 261 450-722 24-310 (364)
122 cd05614 STKc_MSK2_N N-terminal 100.0 2.6E-37 5.7E-42 329.4 20.0 257 451-721 1-270 (332)
123 KOG0032 Ca2+/calmodulin-depend 100.0 3.7E-37 8.1E-42 325.4 20.9 259 448-722 33-297 (382)
124 cd05059 PTKc_Tec_like Catalyti 100.0 5.9E-37 1.3E-41 314.2 21.6 250 450-719 4-255 (256)
125 cd05601 STKc_CRIK Catalytic do 100.0 8E-38 1.7E-42 333.1 15.6 257 450-722 1-267 (330)
126 cd06619 PKc_MKK5 Catalytic dom 100.0 8.8E-37 1.9E-41 317.1 23.0 256 450-722 1-257 (279)
127 cd05067 PTKc_Lck_Blk Catalytic 100.0 1E-36 2.2E-41 313.3 22.9 253 449-721 5-259 (260)
128 cd05598 STKc_LATS Catalytic do 100.0 1.3E-37 2.7E-42 337.7 16.8 255 451-722 2-305 (376)
129 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.5E-36 3.2E-41 312.1 23.2 253 449-721 5-259 (260)
130 cd05621 STKc_ROCK2 Catalytic d 100.0 2.8E-37 6E-42 332.8 18.6 261 447-722 40-308 (370)
131 cd05602 STKc_SGK1 Catalytic do 100.0 3.1E-37 6.7E-42 327.7 18.6 244 456-717 1-246 (325)
132 cd05582 STKc_RSK_N N-terminal 100.0 1.3E-37 2.8E-42 329.6 15.6 244 456-718 2-254 (318)
133 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-36 2.5E-41 311.3 22.1 247 456-720 1-251 (252)
134 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-36 2.3E-41 316.1 21.9 257 449-721 5-277 (277)
135 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-36 2.5E-41 311.9 21.8 251 451-718 1-252 (255)
136 cd05604 STKc_SGK3 Catalytic do 100.0 2.4E-37 5.1E-42 328.6 17.2 241 456-714 1-243 (325)
137 cd05630 STKc_GRK6 Catalytic do 100.0 6.3E-37 1.4E-41 319.0 20.0 259 451-722 1-265 (285)
138 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-36 2.4E-41 329.8 22.6 262 446-722 33-399 (401)
139 cd05603 STKc_SGK2 Catalytic do 100.0 3.6E-37 7.9E-42 326.6 18.4 246 456-719 1-252 (321)
140 cd05632 STKc_GRK5 Catalytic do 100.0 8.7E-37 1.9E-41 318.1 21.0 258 452-722 2-265 (285)
141 cd05071 PTKc_Src Catalytic dom 100.0 2.2E-36 4.7E-41 311.1 23.3 254 449-722 5-260 (262)
142 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-36 2.6E-41 318.2 21.7 259 450-725 5-285 (291)
143 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1E-36 2.2E-41 321.6 21.3 266 450-723 6-291 (309)
144 cd05093 PTKc_TrkB Catalytic do 100.0 1.5E-36 3.2E-41 317.0 22.2 257 450-723 5-280 (288)
145 cd05116 PTKc_Syk Catalytic dom 100.0 2.1E-36 4.6E-41 310.3 22.9 246 457-721 2-254 (257)
146 cd06625 STKc_MEKK3_like Cataly 100.0 2.2E-36 4.8E-41 311.2 23.0 254 450-719 2-261 (263)
147 cd05089 PTKc_Tie1 Catalytic do 100.0 1.8E-36 3.8E-41 317.8 22.3 256 450-722 2-275 (297)
148 cd05055 PTKc_PDGFR Catalytic d 100.0 2.2E-36 4.8E-41 317.6 23.1 257 449-721 34-300 (302)
149 cd05622 STKc_ROCK1 Catalytic d 100.0 6.6E-37 1.4E-41 330.2 19.6 263 443-722 36-308 (371)
150 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-36 3.3E-41 327.0 22.2 263 448-721 19-318 (359)
151 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-36 4.6E-41 314.2 22.4 256 450-724 7-270 (279)
152 cd05045 PTKc_RET Catalytic dom 100.0 2.5E-36 5.4E-41 315.7 22.9 256 451-722 1-286 (290)
153 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.5E-36 5.5E-41 314.4 22.9 259 452-722 6-281 (283)
154 cd05091 PTKc_Ror2 Catalytic do 100.0 1.3E-36 2.8E-41 316.7 20.6 256 450-721 5-282 (283)
155 cd05069 PTKc_Yes Catalytic dom 100.0 4.3E-36 9.2E-41 308.6 24.1 252 450-721 6-259 (260)
156 cd05088 PTKc_Tie2 Catalytic do 100.0 1.3E-36 2.8E-41 319.6 20.4 256 450-722 7-280 (303)
157 cd05597 STKc_DMPK_like Catalyt 100.0 1E-36 2.3E-41 324.2 19.8 260 450-721 1-269 (331)
158 cd05053 PTKc_FGFR Catalytic do 100.0 1.5E-36 3.3E-41 317.7 20.8 259 448-722 10-291 (293)
159 cd05115 PTKc_Zap-70 Catalytic 100.0 3.6E-36 7.7E-41 308.5 23.0 246 458-722 3-255 (257)
160 KOG4278 Protein tyrosine kinas 100.0 2.2E-37 4.8E-42 320.8 13.9 258 443-721 260-522 (1157)
161 KOG0667 Dual-specificity tyros 100.0 5.5E-37 1.2E-41 325.8 17.2 261 451-723 187-507 (586)
162 PF00069 Pkinase: Protein kina 100.0 8.1E-37 1.8E-41 313.8 18.0 256 452-719 1-258 (260)
163 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.6E-36 7.8E-41 313.5 23.1 262 450-722 4-283 (284)
164 cd07861 STKc_CDK1_euk Catalyti 100.0 1.8E-36 4E-41 315.8 21.0 263 451-718 1-282 (285)
165 cd05043 PTK_Ryk Pseudokinase d 100.0 2.9E-36 6.2E-41 313.5 22.3 259 449-723 5-277 (280)
166 cd06637 STKc_TNIK Catalytic do 100.0 1.4E-36 3.1E-41 314.3 19.8 254 447-718 3-269 (272)
167 cd05627 STKc_NDR2 Catalytic do 100.0 5.2E-37 1.1E-41 330.7 17.0 256 450-722 1-297 (360)
168 cd05109 PTKc_HER2 Catalytic do 100.0 4E-36 8.7E-41 312.2 23.1 257 449-724 6-270 (279)
169 cd06654 STKc_PAK1 Catalytic do 100.0 2.6E-36 5.6E-41 316.3 21.7 253 449-721 19-273 (296)
170 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-36 3.1E-41 313.4 19.3 254 449-718 8-265 (267)
171 cd05035 PTKc_Axl_like Catalyti 100.0 4.9E-36 1.1E-40 310.4 23.3 255 452-721 1-271 (273)
172 cd05085 PTKc_Fer Catalytic dom 100.0 5.6E-36 1.2E-40 305.8 23.3 246 457-720 2-249 (250)
173 cd05075 PTKc_Axl Catalytic dom 100.0 5E-36 1.1E-40 310.2 23.3 255 452-721 1-270 (272)
174 cd05061 PTKc_InsR Catalytic do 100.0 2.8E-36 6E-41 314.9 21.4 260 448-723 4-279 (288)
175 PTZ00036 glycogen synthase kin 100.0 2E-36 4.2E-41 333.2 21.0 261 449-721 65-354 (440)
176 cd05066 PTKc_EphR_A Catalytic 100.0 4.9E-36 1.1E-40 309.5 22.7 254 450-721 4-265 (267)
177 cd05097 PTKc_DDR_like Catalyti 100.0 1.7E-36 3.6E-41 317.7 19.3 260 449-720 4-294 (295)
178 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-36 2.4E-41 324.1 18.2 260 450-721 1-269 (331)
179 cd05032 PTKc_InsR_like Catalyt 100.0 3.3E-36 7.1E-41 312.5 21.4 256 449-720 5-276 (277)
180 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-36 3E-41 323.6 18.9 259 450-720 1-268 (332)
181 cd05039 PTKc_Csk_like Catalyti 100.0 6.4E-36 1.4E-40 306.5 23.2 250 449-721 5-255 (256)
182 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.7E-36 8.1E-41 316.9 22.0 258 449-722 17-299 (307)
183 cd05082 PTKc_Csk Catalytic dom 100.0 5.1E-36 1.1E-40 307.2 22.4 248 450-721 6-255 (256)
184 cd06615 PKc_MEK Catalytic doma 100.0 4.7E-36 1E-40 316.2 22.7 264 450-724 1-293 (308)
185 cd06613 STKc_MAP4K3_like Catal 100.0 5.2E-36 1.1E-40 308.2 22.4 255 449-718 2-260 (262)
186 cd05034 PTKc_Src_like Catalyti 100.0 6.3E-36 1.4E-40 307.5 23.0 254 449-721 5-260 (261)
187 cd08221 STKc_Nek9 Catalytic do 100.0 6.8E-36 1.5E-40 306.3 23.1 253 451-719 1-254 (256)
188 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.7E-36 8E-41 321.7 21.9 259 449-722 6-339 (343)
189 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.3E-36 1.1E-40 315.4 22.8 258 449-722 14-296 (304)
190 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-36 3.7E-41 315.8 18.8 261 450-722 5-270 (284)
191 cd05095 PTKc_DDR2 Catalytic do 100.0 3.4E-36 7.4E-41 315.5 21.2 260 449-720 4-295 (296)
192 cd05092 PTKc_TrkA Catalytic do 100.0 4.5E-36 9.7E-41 312.0 21.7 254 450-720 5-279 (280)
193 cd08223 STKc_Nek4 Catalytic do 100.0 7E-36 1.5E-40 306.4 22.6 252 451-718 1-254 (257)
194 cd06612 STKc_MST1_2 Catalytic 100.0 3.9E-36 8.5E-41 308.0 20.7 251 449-718 2-253 (256)
195 cd06609 STKc_MST3_like Catalyt 100.0 5.5E-36 1.2E-40 310.3 21.8 256 450-724 1-257 (274)
196 KOG0596 Dual specificity; seri 100.0 3.8E-37 8.2E-42 317.2 12.7 259 449-723 360-632 (677)
197 cd05051 PTKc_DDR Catalytic dom 100.0 2.9E-36 6.4E-41 316.1 19.8 257 449-720 4-295 (296)
198 cd00192 PTKc Catalytic domain 100.0 7.7E-36 1.7E-40 306.6 22.5 249 456-720 1-262 (262)
199 cd05586 STKc_Sck1_like Catalyt 100.0 6.9E-37 1.5E-41 325.9 15.0 247 458-721 1-256 (330)
200 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.9E-36 2.1E-40 307.4 23.1 255 449-721 4-266 (268)
201 cd06624 STKc_ASK Catalytic dom 100.0 7E-36 1.5E-40 308.5 22.0 257 447-718 5-265 (268)
202 cd08218 STKc_Nek1 Catalytic do 100.0 4.4E-36 9.4E-41 307.8 20.3 252 451-718 1-253 (256)
203 cd07874 STKc_JNK3 Catalytic do 100.0 3.3E-36 7.2E-41 324.0 20.3 263 448-721 15-314 (355)
204 cd06631 STKc_YSK4 Catalytic do 100.0 7E-36 1.5E-40 307.9 21.8 252 451-718 1-262 (265)
205 cd05073 PTKc_Hck Catalytic dom 100.0 1.1E-35 2.4E-40 305.5 23.2 253 449-721 5-259 (260)
206 cd05574 STKc_phototropin_like 100.0 9.2E-36 2E-40 315.4 23.2 256 450-719 1-290 (316)
207 cd05112 PTKc_Itk Catalytic dom 100.0 1E-35 2.2E-40 305.0 22.8 250 450-719 4-255 (256)
208 cd07875 STKc_JNK1 Catalytic do 100.0 5.8E-36 1.2E-40 323.2 21.9 263 448-721 22-321 (364)
209 cd07863 STKc_CDK4 Catalytic do 100.0 4.2E-36 9.1E-41 313.6 20.2 261 451-718 1-285 (288)
210 cd07853 STKc_NLK Catalytic dom 100.0 7E-36 1.5E-40 323.4 22.6 264 451-722 1-292 (372)
211 cd06640 STKc_MST4 Catalytic do 100.0 9E-36 1.9E-40 309.2 22.3 257 450-726 4-261 (277)
212 cd06643 STKc_SLK Catalytic dom 100.0 7.8E-36 1.7E-40 310.6 21.6 256 451-724 6-268 (282)
213 cd06656 STKc_PAK3 Catalytic do 100.0 7.2E-36 1.6E-40 313.0 21.5 254 449-722 18-273 (297)
214 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.5E-36 9.8E-41 311.5 19.6 253 450-722 4-257 (277)
215 KOG0577 Serine/threonine prote 100.0 2.4E-37 5.2E-42 319.4 9.9 254 451-724 27-284 (948)
216 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.2E-36 1.3E-40 316.3 21.0 260 449-724 11-295 (314)
217 cd05050 PTKc_Musk Catalytic do 100.0 9.2E-36 2E-40 311.0 22.0 257 449-721 4-288 (288)
218 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.3E-35 2.7E-40 306.4 22.8 251 451-718 1-264 (267)
219 cd05060 PTKc_Syk_like Catalyti 100.0 1.7E-35 3.6E-40 303.6 23.5 247 456-722 1-255 (257)
220 cd06655 STKc_PAK2 Catalytic do 100.0 7.5E-36 1.6E-40 312.6 21.3 254 450-722 19-273 (296)
221 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-35 2.4E-40 309.8 22.3 262 450-721 4-282 (284)
222 PTZ00266 NIMA-related protein 100.0 3.9E-36 8.4E-41 343.7 20.5 261 447-720 10-297 (1021)
223 cd06638 STKc_myosinIIIA Cataly 100.0 4E-36 8.7E-41 313.4 18.9 265 440-720 8-285 (286)
224 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-35 2.4E-40 304.9 21.8 248 456-720 1-256 (257)
225 cd07868 STKc_CDK8 Catalytic do 100.0 1.5E-35 3.4E-40 313.8 23.3 194 455-657 6-218 (317)
226 PHA03211 serine/threonine kina 100.0 8.7E-36 1.9E-40 326.5 22.0 258 449-721 168-458 (461)
227 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-35 3.3E-40 310.0 22.9 257 449-723 11-274 (292)
228 cd05065 PTKc_EphR_B Catalytic 100.0 1.3E-35 2.8E-40 306.6 22.1 255 450-722 4-268 (269)
229 cd06651 STKc_MEKK3 Catalytic d 100.0 2E-35 4.2E-40 304.8 22.7 253 450-719 2-262 (266)
230 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.1E-35 2.3E-40 307.3 20.7 252 457-720 2-268 (269)
231 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.4E-36 1.8E-40 313.4 20.1 265 450-722 6-290 (301)
232 cd05047 PTKc_Tie Catalytic dom 100.0 1.9E-35 4.1E-40 305.6 22.3 248 457-721 2-267 (270)
233 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.3E-36 2E-40 310.7 20.1 258 450-721 1-265 (286)
234 cd05041 PTKc_Fes_like Catalyti 100.0 2.6E-35 5.5E-40 301.1 22.7 247 456-720 1-250 (251)
235 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-35 3.8E-40 303.0 21.3 247 450-721 6-253 (254)
236 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2E-35 4.4E-40 304.7 21.9 257 450-718 1-264 (267)
237 cd08217 STKc_Nek2 Catalytic do 100.0 2.1E-35 4.6E-40 304.0 21.8 253 451-718 1-262 (265)
238 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.8E-35 3.9E-40 315.5 21.9 259 449-723 11-294 (334)
239 PHA03207 serine/threonine kina 100.0 1.3E-35 2.8E-40 323.0 21.1 264 449-727 91-384 (392)
240 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-35 2.5E-40 308.9 19.7 258 449-724 4-268 (280)
241 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-35 2.8E-40 308.9 19.9 260 441-718 7-279 (282)
242 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.1E-35 4.5E-40 308.0 21.5 263 450-719 1-284 (286)
243 cd05580 STKc_PKA Catalytic dom 100.0 2E-35 4.4E-40 308.7 21.4 251 450-721 1-257 (290)
244 cd05058 PTKc_Met_Ron Catalytic 100.0 2.8E-35 6.1E-40 302.9 22.1 249 456-722 1-259 (262)
245 cd07841 STKc_CDK7 Catalytic do 100.0 2.1E-35 4.5E-40 310.0 21.5 273 451-729 1-293 (298)
246 cd05046 PTK_CCK4 Pseudokinase 100.0 2.8E-35 6.1E-40 305.2 22.1 256 450-720 5-274 (275)
247 cd06639 STKc_myosinIIIB Cataly 100.0 1.6E-35 3.6E-40 309.6 20.5 264 440-719 12-288 (291)
248 KOG0199 ACK and related non-re 100.0 2.3E-36 5E-41 317.9 13.7 255 451-723 111-373 (1039)
249 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.9E-35 6.4E-40 306.5 21.9 263 450-722 4-283 (284)
250 cd06641 STKc_MST3 Catalytic do 100.0 5.2E-35 1.1E-39 303.5 23.4 253 450-722 4-257 (277)
251 KOG0986 G protein-coupled rece 100.0 1.6E-36 3.6E-41 305.3 11.7 261 449-722 184-450 (591)
252 cd06623 PKc_MAPKK_plant_like C 100.0 4.3E-35 9.4E-40 301.7 22.6 255 450-719 1-257 (264)
253 KOG4257 Focal adhesion tyrosin 100.0 5.3E-36 1.1E-40 311.4 15.7 254 449-721 388-648 (974)
254 cd07846 STKc_CDKL2_3 Catalytic 100.0 8.5E-36 1.8E-40 310.9 17.5 262 450-718 1-283 (286)
255 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-35 2.9E-40 317.8 19.4 263 447-722 12-302 (343)
256 KOG4279 Serine/threonine prote 100.0 2.2E-36 4.8E-41 317.2 12.9 250 457-721 582-835 (1226)
257 cd06652 STKc_MEKK2 Catalytic d 100.0 4.6E-35 1E-39 301.8 22.6 253 450-719 2-262 (265)
258 PTZ00284 protein kinase; Provi 100.0 1.3E-35 2.8E-40 330.5 19.8 266 444-723 123-443 (467)
259 KOG4717 Serine/threonine prote 100.0 8.3E-36 1.8E-40 303.5 16.4 255 449-722 17-274 (864)
260 cd08528 STKc_Nek10 Catalytic d 100.0 4E-35 8.6E-40 303.0 21.8 256 451-720 1-268 (269)
261 cd08227 PK_STRAD_alpha Pseudok 100.0 2.8E-35 6E-40 313.1 21.0 264 454-722 2-311 (327)
262 cd06630 STKc_MEKK1 Catalytic d 100.0 3.7E-35 8E-40 303.0 21.3 256 451-719 1-265 (268)
263 cd08220 STKc_Nek8 Catalytic do 100.0 5.9E-35 1.3E-39 299.2 22.6 251 451-718 1-253 (256)
264 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-35 6.5E-40 303.9 20.5 251 457-720 2-268 (269)
265 cd06607 STKc_TAO Catalytic dom 100.0 6.7E-35 1.5E-39 307.4 23.4 257 449-725 14-274 (307)
266 cd05057 PTKc_EGFR_like Catalyt 100.0 7.3E-35 1.6E-39 302.7 23.4 255 449-722 6-268 (279)
267 cd07867 STKc_CDC2L6 Catalytic 100.0 6.4E-35 1.4E-39 309.2 23.2 193 456-657 7-218 (317)
268 cd06626 STKc_MEKK4 Catalytic d 100.0 6.5E-35 1.4E-39 300.4 22.6 253 451-718 1-261 (264)
269 cd06632 STKc_MEKK1_plant Catal 100.0 5.2E-35 1.1E-39 300.0 21.7 251 451-718 1-255 (258)
270 cd05056 PTKc_FAK Catalytic dom 100.0 6.9E-35 1.5E-39 301.4 22.8 254 450-722 6-265 (270)
271 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.5E-35 1.2E-39 300.5 21.7 240 456-720 1-262 (262)
272 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.1E-35 1.1E-39 302.8 21.6 238 457-719 2-273 (274)
273 cd05110 PTKc_HER4 Catalytic do 100.0 5.1E-35 1.1E-39 307.6 21.7 255 449-722 6-268 (303)
274 PHA03209 serine/threonine kina 100.0 3.8E-35 8.3E-40 315.3 21.1 191 448-654 64-255 (357)
275 cd06605 PKc_MAPKK Catalytic do 100.0 1.9E-35 4.1E-40 304.7 17.8 258 450-721 1-260 (265)
276 cd07844 STKc_PCTAIRE_like Cata 100.0 5E-35 1.1E-39 306.0 21.3 262 449-718 4-288 (291)
277 KOG0579 Ste20-like serine/thre 100.0 1.2E-36 2.5E-41 316.1 8.6 263 450-730 32-301 (1187)
278 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.8E-35 1.7E-39 304.5 22.5 263 448-718 3-288 (291)
279 cd07839 STKc_CDK5 Catalytic do 100.0 2.1E-35 4.5E-40 307.7 18.1 262 451-719 1-282 (284)
280 cd06658 STKc_PAK5 Catalytic do 100.0 1.5E-35 3.4E-40 309.6 17.1 254 452-724 24-278 (292)
281 cd06608 STKc_myosinIII_like Ca 100.0 3.6E-35 7.9E-40 304.1 19.4 255 448-718 4-272 (275)
282 cd05609 STKc_MAST Catalytic do 100.0 7.5E-35 1.6E-39 306.7 21.8 256 450-720 1-272 (305)
283 cd05044 PTKc_c-ros Catalytic d 100.0 5.1E-35 1.1E-39 302.2 20.0 249 456-720 1-268 (269)
284 smart00219 TyrKc Tyrosine kina 100.0 1.2E-34 2.6E-39 297.3 22.6 251 452-719 1-258 (258)
285 cd06659 STKc_PAK6 Catalytic do 100.0 3.8E-35 8.3E-40 307.4 19.3 254 454-726 25-279 (297)
286 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.9E-35 2.1E-39 303.0 22.0 263 450-722 1-270 (287)
287 cd06917 STKc_NAK1_like Catalyt 100.0 9.4E-35 2E-39 301.6 21.7 254 451-723 2-260 (277)
288 cd07860 STKc_CDK2_3 Catalytic 100.0 4.8E-35 1.1E-39 304.9 19.5 262 451-718 1-281 (284)
289 cd06647 STKc_PAK_I Catalytic d 100.0 8E-35 1.7E-39 304.5 21.0 254 449-722 18-273 (293)
290 cd06635 STKc_TAO1 Catalytic do 100.0 2E-34 4.4E-39 305.0 24.0 254 451-724 26-283 (317)
291 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.8E-35 2.1E-39 300.6 21.1 256 451-719 2-270 (272)
292 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1E-34 2.3E-39 298.0 21.1 238 456-720 1-259 (259)
293 cd06614 STKc_PAK Catalytic dom 100.0 1.2E-34 2.6E-39 302.3 21.8 258 448-723 17-275 (286)
294 cd05572 STKc_cGK_PKG Catalytic 100.0 9E-35 2E-39 299.1 20.4 250 458-722 1-256 (262)
295 cd05578 STKc_Yank1 Catalytic d 100.0 3.9E-35 8.6E-40 301.0 17.5 251 451-717 1-254 (258)
296 cd06648 STKc_PAK_II Catalytic 100.0 1.3E-34 2.7E-39 301.8 21.6 259 451-728 20-279 (285)
297 cd06617 PKc_MKK3_6 Catalytic d 100.0 1E-34 2.2E-39 302.4 20.8 260 450-724 1-267 (283)
298 cd08225 STKc_Nek5 Catalytic do 100.0 8E-35 1.7E-39 298.5 19.6 252 451-718 1-254 (257)
299 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.3E-35 9.4E-40 300.7 17.6 239 457-720 2-258 (258)
300 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-34 2.5E-39 302.4 21.1 262 451-719 1-283 (286)
301 cd07833 STKc_CDKL Catalytic do 100.0 1.2E-34 2.7E-39 302.5 20.9 262 450-718 1-285 (288)
302 cd07843 STKc_CDC2L1 Catalytic 100.0 8.7E-35 1.9E-39 304.5 19.3 260 450-718 5-290 (293)
303 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.8E-34 6.2E-39 297.3 22.7 256 452-722 1-272 (273)
304 KOG1025 Epidermal growth facto 100.0 1.3E-35 2.8E-40 317.4 12.8 251 452-723 698-958 (1177)
305 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-34 2.9E-39 301.5 20.0 262 451-718 1-281 (284)
306 KOG1035 eIF-2alpha kinase GCN2 100.0 1.8E-35 4E-40 330.0 14.1 255 447-718 476-871 (1351)
307 cd05633 STKc_GRK3 Catalytic do 100.0 2.1E-34 4.6E-39 299.1 21.1 252 457-725 1-262 (279)
308 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.4E-34 3.1E-39 298.6 19.6 248 457-720 2-267 (268)
309 cd05577 STKc_GRK Catalytic dom 100.0 1.4E-34 3.1E-39 300.2 19.7 252 458-722 1-258 (277)
310 cd06606 STKc_MAPKKK Catalytic 100.0 4.3E-34 9.3E-39 293.1 22.7 252 451-718 1-257 (260)
311 cd07835 STKc_CDK1_like Catalyt 100.0 1.7E-34 3.8E-39 300.6 19.5 261 452-718 1-280 (283)
312 cd07837 STKc_CdkB_plant Cataly 100.0 2.2E-34 4.7E-39 301.8 20.2 264 450-718 1-291 (295)
313 KOG0586 Serine/threonine prote 100.0 9.2E-35 2E-39 305.4 17.1 253 449-721 55-309 (596)
314 KOG0983 Mitogen-activated prot 100.0 2.5E-35 5.4E-40 278.7 11.0 253 453-721 95-352 (391)
315 cd05122 PKc_STE Catalytic doma 100.0 7.7E-34 1.7E-38 289.9 22.9 250 451-718 1-251 (253)
316 cd07845 STKc_CDK10 Catalytic d 100.0 3.6E-34 7.9E-39 302.1 21.0 272 449-727 6-299 (309)
317 cd07842 STKc_CDK8_like Catalyt 100.0 4.4E-34 9.4E-39 302.6 21.4 264 451-718 1-313 (316)
318 cd06653 STKc_MEKK3_like_1 Cata 100.0 8.1E-34 1.7E-38 292.4 22.6 253 450-719 2-262 (264)
319 PLN00009 cyclin-dependent kina 100.0 5.8E-34 1.2E-38 298.4 21.7 266 450-721 2-287 (294)
320 cd06616 PKc_MKK4 Catalytic dom 100.0 1.6E-34 3.5E-39 301.6 17.2 260 451-723 5-272 (288)
321 cd08215 STKc_Nek Catalytic dom 100.0 9E-34 2E-38 290.5 22.2 253 451-718 1-255 (258)
322 cd07850 STKc_JNK Catalytic dom 100.0 8.6E-34 1.9E-38 304.9 22.8 263 448-721 14-314 (353)
323 cd06634 STKc_TAO2 Catalytic do 100.0 7.6E-34 1.6E-38 299.4 21.7 257 450-726 15-275 (308)
324 cd05579 STKc_MAST_like Catalyt 100.0 3.1E-34 6.6E-39 295.4 18.2 247 458-720 1-256 (265)
325 cd06627 STKc_Cdc7_like Catalyt 100.0 1.4E-33 3E-38 288.6 22.8 250 451-718 1-251 (254)
326 cd08530 STKc_CNK2-like Catalyt 100.0 5E-34 1.1E-38 292.3 19.5 251 451-718 1-253 (256)
327 cd07838 STKc_CDK4_6_like Catal 100.0 1.6E-33 3.5E-38 293.9 23.2 260 452-718 1-284 (287)
328 cd06633 STKc_TAO3 Catalytic do 100.0 2.3E-33 5.1E-38 296.2 24.2 258 452-729 23-284 (313)
329 KOG0584 Serine/threonine prote 100.0 4.8E-35 1E-39 307.7 11.1 252 455-723 45-301 (632)
330 KOG0690 Serine/threonine prote 100.0 1.2E-34 2.5E-39 280.0 12.8 255 449-721 167-427 (516)
331 cd07849 STKc_ERK1_2_like Catal 100.0 4.5E-34 9.8E-39 305.0 18.8 263 448-720 3-294 (336)
332 KOG0607 MAP kinase-interacting 100.0 2.8E-34 6.1E-39 277.0 15.1 267 442-722 75-365 (463)
333 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.6E-34 1.2E-38 304.3 19.1 264 449-720 4-293 (337)
334 cd07831 STKc_MOK Catalytic dom 100.0 1.1E-33 2.4E-38 294.4 20.5 257 452-718 1-279 (282)
335 cd07855 STKc_ERK5 Catalytic do 100.0 5.8E-34 1.3E-38 303.9 18.8 268 449-724 4-300 (334)
336 PHA03210 serine/threonine kina 100.0 8.4E-34 1.8E-38 317.0 20.8 273 448-724 146-460 (501)
337 cd05581 STKc_PDK1 Catalytic do 100.0 6.5E-34 1.4E-38 295.6 18.3 251 450-718 1-277 (280)
338 cd06657 STKc_PAK4 Catalytic do 100.0 1.1E-33 2.5E-38 295.4 20.2 254 456-728 26-280 (292)
339 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-33 2.5E-38 290.5 19.8 246 456-719 2-252 (260)
340 PHA02882 putative serine/threo 100.0 1.9E-33 4E-38 294.2 21.4 258 449-719 11-293 (294)
341 PHA03390 pk1 serine/threonine- 100.0 2.2E-33 4.8E-38 289.4 21.5 251 443-719 7-263 (267)
342 cd07865 STKc_CDK9 Catalytic do 100.0 2E-33 4.3E-38 296.6 21.5 263 449-718 11-307 (310)
343 cd06618 PKc_MKK7 Catalytic dom 100.0 1.3E-33 2.8E-38 296.1 19.8 257 449-722 14-277 (296)
344 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-35 3.3E-40 332.0 4.9 259 447-722 1232-1498(1509)
345 cd07840 STKc_CDK9_like Catalyt 100.0 2E-33 4.4E-38 293.0 20.6 260 452-718 1-284 (287)
346 cd05606 STKc_beta_ARK Catalyti 100.0 3.2E-33 6.9E-38 290.1 21.9 251 457-724 1-261 (278)
347 cd08226 PK_STRAD_beta Pseudoki 100.0 2.2E-33 4.8E-38 298.6 20.9 259 456-722 4-312 (328)
348 cd07834 STKc_MAPK Catalytic do 100.0 1.6E-33 3.4E-38 300.3 19.6 263 451-721 1-292 (330)
349 cd05118 STKc_CMGC Catalytic do 100.0 2.9E-33 6.4E-38 291.2 20.9 260 452-718 1-280 (283)
350 cd07852 STKc_MAPK15 Catalytic 100.0 1.4E-33 3E-38 301.5 18.6 263 448-719 5-296 (337)
351 cd07830 STKc_MAK_like Catalyti 100.0 2.2E-33 4.7E-38 292.3 19.3 259 452-718 1-280 (283)
352 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.7E-33 5.9E-38 297.4 20.3 264 446-721 6-291 (328)
353 KOG4250 TANK binding protein k 100.0 6.2E-34 1.3E-38 303.0 15.0 201 452-658 15-227 (732)
354 PTZ00024 cyclin-dependent prot 100.0 2.3E-33 5E-38 299.5 19.6 270 449-725 7-320 (335)
355 KOG0200 Fibroblast/platelet-de 100.0 2.1E-33 4.5E-38 318.4 20.0 259 449-722 295-579 (609)
356 cd07864 STKc_CDK12 Catalytic d 100.0 3.1E-33 6.7E-38 294.1 19.9 265 447-718 4-299 (302)
357 cd05123 STKc_AGC Catalytic dom 100.0 3.8E-33 8.3E-38 284.8 20.0 243 458-718 1-247 (250)
358 cd08222 STKc_Nek11 Catalytic d 100.0 2.4E-33 5.2E-38 288.2 18.5 253 451-718 1-257 (260)
359 KOG0666 Cyclin C-dependent kin 100.0 2.5E-34 5.4E-39 276.6 10.2 274 449-727 23-346 (438)
360 cd05613 STKc_MSK1_N N-terminal 100.0 5.1E-33 1.1E-37 290.6 21.2 260 451-724 1-274 (290)
361 KOG0604 MAP kinase-activated p 100.0 2.7E-34 5.8E-39 275.2 10.4 257 448-721 59-325 (400)
362 cd08216 PK_STRAD Pseudokinase 100.0 5.3E-33 1.2E-37 294.0 20.9 263 454-722 6-299 (314)
363 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.8E-33 1.3E-37 297.2 21.2 270 441-722 8-304 (345)
364 cd07879 STKc_p38delta_MAPK13 C 100.0 5E-33 1.1E-37 297.5 19.8 258 449-719 14-298 (342)
365 cd05583 STKc_MSK_N N-terminal 100.0 6.6E-33 1.4E-37 289.4 20.1 258 451-722 1-267 (288)
366 KOG0587 Traf2- and Nck-interac 100.0 4.1E-33 9E-38 302.1 18.5 272 441-729 10-293 (953)
367 cd07829 STKc_CDK_like Catalyti 100.0 3.7E-33 8E-38 290.3 17.6 260 452-718 1-279 (282)
368 cd07866 STKc_BUR1 Catalytic do 100.0 4.4E-33 9.5E-38 294.2 17.7 263 449-718 7-308 (311)
369 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-32 2.9E-37 316.7 23.1 148 450-603 4-152 (669)
370 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-32 2.4E-37 294.8 20.5 263 447-721 12-301 (343)
371 cd07851 STKc_p38 Catalytic dom 100.0 9.5E-33 2.1E-37 295.5 17.2 262 448-721 13-301 (343)
372 cd07857 STKc_MPK1 Catalytic do 100.0 2.4E-32 5.3E-37 291.1 20.2 263 451-721 1-295 (332)
373 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.5E-32 3.2E-37 293.9 17.7 263 449-722 4-304 (342)
374 KOG4236 Serine/threonine prote 100.0 1.7E-33 3.7E-38 287.3 9.3 250 455-721 569-822 (888)
375 KOG1024 Receptor-like protein 100.0 2.1E-32 4.5E-37 270.7 16.0 263 442-722 276-555 (563)
376 KOG0671 LAMMER dual specificit 100.0 2E-33 4.3E-38 278.8 8.0 275 437-723 76-411 (415)
377 KOG1151 Tousled-like protein k 100.0 2.1E-33 4.6E-38 281.2 7.7 263 447-719 460-742 (775)
378 KOG0696 Serine/threonine prote 100.0 8.6E-33 1.9E-37 274.7 10.8 244 449-710 348-593 (683)
379 KOG1006 Mitogen-activated prot 100.0 1.9E-34 4.2E-39 271.7 -0.9 253 456-721 70-330 (361)
380 KOG0603 Ribosomal protein S6 k 100.0 1.6E-32 3.4E-37 290.3 13.2 243 449-721 321-566 (612)
381 KOG0612 Rho-associated, coiled 100.0 4.6E-33 9.9E-38 308.5 9.5 264 442-722 67-342 (1317)
382 KOG0669 Cyclin T-dependent kin 100.0 1.7E-33 3.6E-38 263.2 4.4 274 450-730 17-327 (376)
383 cd05576 STKc_RPK118_like Catal 100.0 1.9E-31 4E-36 270.0 16.7 219 461-712 4-223 (237)
384 KOG0662 Cyclin-dependent kinas 100.0 1.3E-31 2.7E-36 238.2 10.6 265 451-722 3-287 (292)
385 KOG0695 Serine/threonine prote 100.0 3.2E-31 7E-36 257.0 13.1 260 449-719 249-517 (593)
386 smart00220 S_TKc Serine/Threon 100.0 3E-30 6.5E-35 261.5 20.3 240 462-718 1-241 (244)
387 PLN03225 Serine/threonine-prot 100.0 1.1E-30 2.4E-35 293.2 17.9 266 448-723 130-455 (566)
388 KOG0614 cGMP-dependent protein 100.0 5E-32 1.1E-36 276.0 5.5 255 450-722 420-681 (732)
389 PLN03224 probable serine/threo 100.0 3.4E-30 7.5E-35 281.6 19.6 269 448-722 143-504 (507)
390 KOG1027 Serine/threonine prote 100.0 2E-31 4.2E-36 287.8 7.8 246 453-720 512-769 (903)
391 KOG0984 Mitogen-activated prot 100.0 1.1E-30 2.4E-35 237.7 8.3 203 449-657 45-254 (282)
392 KOG0608 Warts/lats-like serine 100.0 1.1E-29 2.4E-34 264.7 14.8 204 450-659 629-875 (1034)
393 KOG0668 Casein kinase II, alph 100.0 4.9E-30 1.1E-34 236.8 8.8 259 448-722 36-326 (338)
394 PLN00113 leucine-rich repeat r 100.0 1.6E-29 3.5E-34 307.3 15.7 306 42-350 29-374 (968)
395 KOG0664 Nemo-like MAPK-related 100.0 6.3E-31 1.4E-35 248.5 0.7 263 452-722 55-347 (449)
396 KOG0665 Jun-N-terminal kinase 100.0 1.6E-29 3.4E-34 245.3 8.2 261 449-721 16-313 (369)
397 KOG1290 Serine/threonine prote 100.0 2.2E-28 4.8E-33 249.2 16.4 133 449-589 77-222 (590)
398 cd00180 PKc Catalytic domain o 100.0 1.3E-27 2.7E-32 236.4 20.6 212 458-719 1-215 (215)
399 KOG1152 Signal transduction se 100.0 1.2E-28 2.6E-33 255.4 9.2 199 449-655 560-769 (772)
400 KOG0576 Mitogen-activated prot 100.0 5.3E-29 1.1E-33 262.2 5.8 255 448-718 13-271 (829)
401 KOG0670 U4/U6-associated splic 99.9 1.5E-28 3.3E-33 251.4 8.3 274 437-722 419-750 (752)
402 KOG4194 Membrane glycoprotein 99.9 8.1E-29 1.7E-33 256.7 2.5 282 75-357 124-417 (873)
403 KOG4194 Membrane glycoprotein 99.9 1.1E-28 2.4E-33 255.6 2.0 258 77-335 150-439 (873)
404 smart00221 STYKc Protein kinas 99.9 4.8E-26 1E-30 228.0 19.4 199 452-657 1-202 (225)
405 KOG1345 Serine/threonine kinas 99.9 4.1E-27 8.9E-32 223.0 8.9 254 448-719 22-288 (378)
406 KOG1167 Serine/threonine prote 99.9 3.4E-27 7.4E-32 238.0 8.0 268 442-723 28-386 (418)
407 PLN00181 protein SPA1-RELATED; 99.9 6.5E-26 1.4E-30 268.1 8.8 199 505-722 28-269 (793)
408 KOG0444 Cytoskeletal regulator 99.9 9.3E-27 2E-31 242.7 -0.6 287 76-369 78-378 (1255)
409 smart00750 KIND kinase non-cat 99.9 1.3E-24 2.8E-29 209.1 14.2 165 534-722 1-169 (176)
410 KOG0444 Cytoskeletal regulator 99.9 8.5E-26 1.8E-30 235.6 -2.3 244 77-325 8-258 (1255)
411 KOG0195 Integrin-linked kinase 99.9 4E-24 8.7E-29 202.5 6.7 250 453-721 193-445 (448)
412 PRK09188 serine/threonine prot 99.9 9.4E-23 2E-27 213.9 16.9 168 447-630 15-195 (365)
413 KOG1163 Casein kinase (serine/ 99.9 1.9E-22 4.2E-27 188.3 12.2 257 448-719 13-281 (341)
414 KOG1164 Casein kinase (serine/ 99.9 8.8E-22 1.9E-26 207.8 18.0 257 451-722 19-297 (322)
415 KOG0472 Leucine-rich repeat pr 99.9 9.3E-25 2E-29 217.6 -5.6 245 78-335 47-297 (565)
416 COG0515 SPS1 Serine/threonine 99.9 8.4E-21 1.8E-25 201.7 21.9 258 452-718 2-275 (384)
417 KOG1240 Protein kinase contain 99.9 1.7E-22 3.7E-27 224.2 5.9 253 451-723 24-296 (1431)
418 KOG0590 Checkpoint kinase and 99.9 2.2E-22 4.8E-27 225.2 7.0 258 454-722 322-589 (601)
419 PRK10359 lipopolysaccharide co 99.9 2.1E-21 4.5E-26 189.2 12.3 189 433-649 12-216 (232)
420 KOG1165 Casein kinase (serine/ 99.9 1.6E-20 3.5E-25 183.4 17.1 199 450-659 28-240 (449)
421 KOG4237 Extracellular matrix p 99.8 2.2E-22 4.8E-27 200.6 2.8 293 76-370 67-406 (498)
422 KOG0472 Leucine-rich repeat pr 99.8 3.9E-23 8.4E-28 206.1 -6.3 238 76-325 68-310 (565)
423 cd05147 RIO1_euk RIO kinase fa 99.8 1.5E-20 3.2E-25 181.6 11.8 142 455-605 2-167 (190)
424 PF14531 Kinase-like: Kinase-l 99.8 9E-20 2E-24 183.1 13.6 236 451-709 13-288 (288)
425 cd05145 RIO1_like RIO kinase f 99.8 2E-19 4.2E-24 174.7 15.3 142 455-606 2-168 (190)
426 PRK12274 serine/threonine prot 99.8 3.9E-19 8.4E-24 169.2 15.3 186 453-656 5-208 (218)
427 KOG4237 Extracellular matrix p 99.8 7.3E-21 1.6E-25 189.8 2.3 246 101-346 67-360 (498)
428 KOG0603 Ribosomal protein S6 k 99.8 8.3E-21 1.8E-25 201.7 2.1 226 458-712 2-232 (612)
429 PRK15387 E3 ubiquitin-protein 99.8 1.6E-19 3.4E-24 204.6 12.3 238 77-353 223-466 (788)
430 KOG0617 Ras suppressor protein 99.8 2.1E-21 4.5E-26 172.1 -2.7 164 122-310 30-194 (264)
431 KOG1023 Natriuretic peptide re 99.8 1.7E-19 3.7E-24 192.4 10.7 212 503-723 1-225 (484)
432 KOG0617 Ras suppressor protein 99.8 6E-21 1.3E-25 169.2 -3.2 167 97-287 29-195 (264)
433 KOG1166 Mitotic checkpoint ser 99.8 6.2E-19 1.3E-23 200.7 12.2 248 447-723 695-954 (974)
434 KOG0618 Serine/threonine phosp 99.8 2.3E-20 4.9E-25 204.6 -1.2 239 77-325 220-465 (1081)
435 PRK15370 E3 ubiquitin-protein 99.8 1.5E-18 3.1E-23 198.2 13.3 221 77-345 179-401 (754)
436 PRK15370 E3 ubiquitin-protein 99.8 2.2E-18 4.8E-23 196.6 11.8 223 76-325 199-428 (754)
437 PRK15387 E3 ubiquitin-protein 99.8 2.1E-18 4.6E-23 195.5 10.5 222 76-332 242-465 (788)
438 KOG0618 Serine/threonine phosp 99.7 2.1E-19 4.6E-24 197.0 -1.5 243 74-324 239-488 (1081)
439 PRK10345 hypothetical protein; 99.7 3.8E-17 8.3E-22 159.2 14.0 136 454-603 6-158 (210)
440 KOG4158 BRPK/PTEN-induced prot 99.7 1.2E-17 2.6E-22 167.0 10.5 195 507-719 274-511 (598)
441 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.5E-18 3.3E-23 181.1 3.8 175 522-716 329-510 (516)
442 smart00090 RIO RIO-like kinase 99.7 5.9E-17 1.3E-21 162.0 14.0 146 450-606 28-199 (237)
443 PLN03210 Resistant to P. syrin 99.7 1.1E-16 2.5E-21 195.4 19.2 247 100-356 610-869 (1153)
444 cd00116 LRR_RI Leucine-rich re 99.7 6.9E-19 1.5E-23 186.5 -0.2 112 214-325 163-291 (319)
445 PLN03210 Resistant to P. syrin 99.7 1.1E-16 2.5E-21 195.3 18.5 245 76-331 611-864 (1153)
446 PRK14879 serine/threonine prot 99.7 1.1E-16 2.5E-21 158.6 13.7 137 456-604 2-143 (211)
447 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-16 2.7E-21 156.4 13.0 148 443-606 8-176 (198)
448 cd00116 LRR_RI Leucine-rich re 99.7 4.3E-18 9.4E-23 180.4 0.0 252 81-347 3-293 (319)
449 TIGR03724 arch_bud32 Kae1-asso 99.7 3.9E-16 8.5E-21 153.2 12.8 132 458-604 2-138 (199)
450 PRK09605 bifunctional UGMP fam 99.7 3.4E-16 7.4E-21 176.6 13.0 142 448-605 331-477 (535)
451 KOG0606 Microtubule-associated 99.6 1.4E-16 3E-21 177.9 7.4 214 449-718 82-315 (1205)
452 cd05119 RIO RIO kinase family, 99.6 3.6E-15 7.7E-20 144.8 11.9 139 455-606 2-165 (187)
453 cd05120 APH_ChoK_like Aminogly 99.6 1.6E-14 3.6E-19 134.7 13.7 135 454-604 2-138 (155)
454 PRK01723 3-deoxy-D-manno-octul 99.6 3.7E-14 8.1E-19 142.2 13.4 139 455-605 36-192 (239)
455 KOG0532 Leucine-rich repeat (L 99.5 5.3E-16 1.1E-20 162.1 -0.5 175 123-325 73-247 (722)
456 KOG0590 Checkpoint kinase and 99.5 1.4E-15 3.1E-20 170.6 1.1 257 450-719 20-287 (601)
457 KOG0532 Leucine-rich repeat (L 99.5 8.5E-16 1.8E-20 160.6 -1.6 196 99-323 73-271 (722)
458 PLN03150 hypothetical protein; 99.5 5.5E-14 1.2E-18 160.3 10.3 118 66-184 403-526 (623)
459 PLN03150 hypothetical protein; 99.5 1.2E-13 2.5E-18 157.7 10.6 119 242-377 420-538 (623)
460 COG4886 Leucine-rich repeat (L 99.5 8E-14 1.7E-18 152.2 7.3 201 105-333 97-298 (394)
461 TIGR01982 UbiB 2-polyprenylphe 99.4 1.3E-12 2.8E-17 142.5 12.2 144 455-606 122-308 (437)
462 COG4886 Leucine-rich repeat (L 99.4 3E-13 6.5E-18 147.6 7.4 217 65-310 80-299 (394)
463 KOG1266 Protein kinase [Signal 99.3 8.7E-13 1.9E-17 129.7 5.1 210 500-725 118-338 (458)
464 KOG0601 Cyclin-dependent kinas 99.3 4.5E-12 9.7E-17 135.8 7.6 249 450-718 114-379 (524)
465 PRK04750 ubiB putative ubiquin 99.3 2.8E-11 6.1E-16 133.4 13.8 146 450-606 120-315 (537)
466 cd05151 ChoK Choline Kinase (C 99.3 2.2E-11 4.7E-16 116.1 10.4 131 455-604 3-136 (170)
467 KOG1243 Protein kinase [Genera 99.3 9.9E-11 2.1E-15 126.6 15.8 168 470-652 33-200 (690)
468 cd05146 RIO3_euk RIO kinase fa 99.2 1.6E-10 3.4E-15 110.6 14.7 139 456-606 3-175 (197)
469 PF14580 LRR_9: Leucine-rich r 99.2 5.6E-12 1.2E-16 118.1 4.6 101 216-318 42-146 (175)
470 PF14580 LRR_9: Leucine-rich r 99.2 6.8E-12 1.5E-16 117.5 5.1 85 98-186 16-101 (175)
471 KOG3207 Beta-tubulin folding c 99.2 1.1E-12 2.3E-17 133.8 -0.4 203 105-325 97-314 (505)
472 KOG1909 Ran GTPase-activating 99.2 2E-12 4.3E-17 128.5 -0.7 111 214-324 183-310 (382)
473 KOG1259 Nischarin, modulator o 99.2 3.5E-12 7.6E-17 123.6 0.7 212 87-326 200-413 (490)
474 KOG0601 Cyclin-dependent kinas 99.2 1.6E-11 3.4E-16 131.7 4.6 252 445-721 260-517 (524)
475 COG3642 Mn2+-dependent serine/ 99.2 3.9E-10 8.4E-15 103.7 12.0 133 457-604 3-140 (204)
476 KOG3207 Beta-tubulin folding c 99.1 7.2E-12 1.6E-16 127.8 -0.3 211 98-326 118-340 (505)
477 cd05154 ACAD10_11_like Acyl-Co 99.1 1E-09 2.2E-14 109.5 13.4 143 456-604 4-206 (223)
478 KOG0531 Protein phosphatase 1, 99.1 1.2E-11 2.5E-16 135.3 -1.0 197 99-326 70-269 (414)
479 KOG3087 Serine/threonine prote 99.1 1.1E-09 2.3E-14 100.1 11.6 146 454-604 11-165 (229)
480 COG4248 Uncharacterized protei 99.1 5.7E-09 1.2E-13 106.6 17.9 257 454-722 15-300 (637)
481 KOG1259 Nischarin, modulator o 99.1 1.3E-11 2.8E-16 119.8 -1.1 177 101-304 237-415 (490)
482 KOG1909 Ran GTPase-activating 99.1 1.5E-11 3.4E-16 122.3 -0.7 222 97-325 26-283 (382)
483 KOG0531 Protein phosphatase 1, 99.0 5.3E-11 1.1E-15 130.2 1.2 215 78-325 74-290 (414)
484 KOG0606 Microtubule-associated 99.0 1.3E-10 2.8E-15 130.8 0.9 251 448-713 802-1084(1205)
485 PF01163 RIO1: RIO1 family; I 99.0 8.4E-09 1.8E-13 98.5 12.7 129 465-606 1-157 (188)
486 PF13855 LRR_8: Leucine rich r 98.9 7.7E-10 1.7E-14 85.2 2.7 59 102-160 2-60 (61)
487 PF13855 LRR_8: Leucine rich r 98.9 8.7E-10 1.9E-14 84.9 3.0 61 125-185 1-61 (61)
488 PRK15123 lipopolysaccharide co 98.8 5.6E-08 1.2E-12 98.6 14.1 143 457-604 29-194 (268)
489 KOG3741 Poly(A) ribonuclease s 98.8 1.1E-07 2.4E-12 100.0 16.2 221 462-723 288-526 (655)
490 COG0478 RIO-like serine/threon 98.8 5.3E-08 1.1E-12 95.2 12.3 138 452-604 93-251 (304)
491 KOG1859 Leucine-rich repeat pr 98.7 2.9E-10 6.3E-15 122.6 -5.4 125 151-301 166-292 (1096)
492 KOG1859 Leucine-rich repeat pr 98.7 4E-10 8.7E-15 121.6 -5.9 129 173-326 164-293 (1096)
493 KOG2137 Protein kinase [Signal 98.7 6E-09 1.3E-13 113.5 1.7 154 558-721 105-268 (700)
494 KOG4658 Apoptotic ATPase [Sign 98.6 1.7E-08 3.8E-13 117.9 3.8 85 96-181 566-650 (889)
495 KOG4579 Leucine-rich repeat (L 98.6 5.6E-09 1.2E-13 90.3 -1.4 81 103-185 29-112 (177)
496 KOG2982 Uncharacterized conser 98.6 6.7E-09 1.4E-13 101.2 -1.5 86 100-185 70-158 (418)
497 PRK09902 hypothetical protein; 98.5 1.7E-06 3.7E-11 83.0 13.2 141 458-604 26-179 (216)
498 KOG4658 Apoptotic ATPase [Sign 98.5 9.1E-08 2E-12 112.0 4.9 200 101-325 523-730 (889)
499 PF06293 Kdo: Lipopolysacchari 98.5 9.4E-07 2E-11 86.7 11.0 106 494-605 56-171 (206)
500 KOG2982 Uncharacterized conser 98.5 2.7E-08 5.9E-13 97.1 -0.1 207 102-326 46-263 (418)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.1e-77 Score=724.32 Aligned_cols=430 Identities=29% Similarity=0.485 Sum_probs=277.2
Q ss_pred cCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccceEEecCCcccCCCCCCCccc----cccCCCCCCCC
Q 004642 271 LSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLSGTIPKTLRPM----YVDLSFNNLEG 346 (740)
Q Consensus 271 l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~----~l~ls~N~l~~ 346 (740)
|++|++++.+|..+.++++|+.|+|++|.++|.+|..+..+++|+.|+|++|+++|.+|..+..+ .+++++|++.|
T Consensus 506 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 506 LSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred CcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 33333333344444444555555555555555555555555556666666666665555554332 36667777777
Q ss_pred CcCc--cccCCCCCcccCCccCCCCCC--CCCCcccccCCCCcccceeeeehhhHHHHHHHHHHHHHHHHhhccCCcccc
Q 004642 347 EIPT--YLRGNPPKSFVGNKGLSGNVE--GFPSSSQRQKLTPSISLFAKIFLPLNLVLAFIIFGFTLLFKCQNKNPRLNS 422 (740)
Q Consensus 347 ~~p~--~~~~~~~~~~~~n~~~~~~~~--~~~~~s~~~~~~~~~~~~~~i~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 422 (740)
.+|. .+......++.+|+.+||... +.++|..... .. .+ .++++.+++++++++++++++++++++++.+...
T Consensus 586 ~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (968)
T PLN00113 586 SLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK-TP-SW-WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKR 662 (968)
T ss_pred eCCCcchhcccChhhhcCCccccCCccccCCCCCccccc-cc-ee-eeehhHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 6665 244555667889999998643 3455533211 11 11 2222222332222222222223322222111111
Q ss_pred ccccCCCce-eeec--CCCcccHHHHHHHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHH
Q 004642 423 RAAKNGDVF-SVWN--YDGKILYEDLINATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQN 498 (740)
Q Consensus 423 ~~~~~~~~~-~~~~--~~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~ 498 (740)
.....+... ..+. ....+.+++ ....|...+.||+|+||.||+|.. .+|+.||||++...... ..+
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~ 732 (968)
T PLN00113 663 VENEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSS 732 (968)
T ss_pred cccccccccccccccccchhhhHHH---HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHH
Confidence 000111100 0000 011223333 345677888999999999999975 57899999998754322 124
Q ss_pred HHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 004642 499 EAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIH 578 (740)
Q Consensus 499 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 578 (740)
|++.+++++|||||+++|+|.+++..++||||+++|+|.++++ .++|.++.+++.|||+||+|||..+.++|+|
T Consensus 733 ~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH 806 (968)
T PLN00113 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVV 806 (968)
T ss_pred HHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeec
Confidence 6888999999999999999999999999999999999999995 3789999999999999999999766669999
Q ss_pred cCCCCCceEEcCCCcEEEeecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcc
Q 004642 579 RDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLL 658 (740)
Q Consensus 579 ~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~ 658 (740)
|||||+||+++.++.+++. ||.+.....+ ....||+.|+|||++.+..++.++|||||||++|||+||+.||+..
T Consensus 807 ~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~ 881 (968)
T PLN00113 807 GNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAE 881 (968)
T ss_pred CCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Confidence 9999999999999888875 6655433211 2236789999999999999999999999999999999999998542
Q ss_pred ccccc-------CCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 659 SSLSS-------SSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 659 ~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
..... ..........++++.+..... ...++..++.+++.+||+.||++||+|+|++++|+.....
T Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 882 FGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS-VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred cCCCCcHHHHHHHhcCccchhheeCccccCCCC-ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 21100 000111122333443322211 1224455688999999999999999999999999877543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-50 Score=423.35 Aligned_cols=281 Identities=40% Similarity=0.642 Sum_probs=237.5
Q ss_pred CCcccHHHHHHHhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeee
Q 004642 437 DGKILYEDLINATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYG 516 (740)
Q Consensus 437 ~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 516 (740)
...|+++++..+|++|.-.+.||+|+||.||+|..++|+.||||++....... .++|.+|++++.+++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 45689999999999999999999999999999999999999999887755432 256999999999999999999999
Q ss_pred eeeecC-eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEE
Q 004642 517 FCLHKK-CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEAS 595 (740)
Q Consensus 517 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 595 (740)
||.+.+ +.++|||||++|+|.++++..... .++|.+|++||.++|+||+|||+.+.+.|+||||||+|||+|+++++|
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999998 599999999999999999987655 789999999999999999999999888999999999999999999999
Q ss_pred Eeecccceeccc-CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccc-----c---cCCC
Q 004642 596 VADFGTARLLHV-DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSL-----S---SSSG 666 (740)
Q Consensus 596 l~DfG~a~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~-----~---~~~~ 666 (740)
|+|||+|+.... .........||.+|+|||++..+..+.|+|||||||+++|++||+.|.+..... . ....
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999976543 222221117999999999999999999999999999999999999887643210 0 0111
Q ss_pred CCchhhhhhcccCCC-cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 667 PKIMLIDVLNQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 667 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.+..+.+++|+.+.. .... .++..++..++.+|++.+|++||+|.||+++|....
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~--~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPD--EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HCcchhheeCCCccCCCCCh--HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 223567888888763 2221 145666899999999999999999999999995543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-46 Score=393.03 Aligned_cols=256 Identities=35% Similarity=0.553 Sum_probs=215.0
Q ss_pred cccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-eEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK-CMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 530 (740)
..+.+.||+|+||+||+|.+.....||||++......... .++|.+|+.++.+++|||||+++|+|.++. ..++||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 3344559999999999999965555999999887666555 789999999999999999999999999987 79999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCceEEcCCC-cEEEeecccceecccC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLS-IIHRDISSNNILLDSNL-EASVADFGTARLLHVD 608 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-ivH~dlkp~NIll~~~~-~~kl~DfG~a~~~~~~ 608 (740)
+++|+|.++++.. ....+++..+++++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999885 334799999999999999999999999 7 99999999999999997 9999999999886543
Q ss_pred CCcccccccCCCcccccccc--ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSYRTLRAGTYGYIAPELAY--TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
....+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ......+.....++..+..
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-------~~~~~~v~~~~~Rp~~p~~ 270 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-------VQVASAVVVGGLRPPIPKE 270 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcCCCCCCCcc
Confidence 23344468999999999999 56899999999999999999999999876432 2233344444444443332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....+..++.+||+.||+.||++.|++..|...
T Consensus 271 ---~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 271 ---CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred ---CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 223378899999999999999999999999854
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=373.66 Aligned_cols=259 Identities=27% Similarity=0.392 Sum_probs=213.4
Q ss_pred cccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-eEEEEEE
Q 004642 452 FHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK-CMFLIYE 529 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 529 (740)
.+..+.||+|..|+||++.++ +++.+|+|++... .++...+++.+|+++++..+||+||.+||.|..++ ...++||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 344677999999999999665 6889999999543 34456789999999999999999999999999998 5999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
||++|+|++++...+ .+++...-+|+.+|++||.|||+. .+|+||||||+|||++..|++||+|||.++.+...
T Consensus 159 YMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 999999999997653 589999999999999999999963 29999999999999999999999999999877533
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+.... .........+..+++... +..+.. .
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~--~~~~~~~~Ll~~Iv~~pp-P~lP~~--~ 306 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN--PPYLDIFELLCAIVDEPP-PRLPEG--E 306 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC--CCCCCHHHHHHHHhcCCC-CCCCcc--c
Confidence 5566789999999999999999999999999999999999999976531 111112222334444322 222222 2
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
...++..|+..|+++||.+||+++|+++|-.-.+.
T Consensus 307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 307 FSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 34459999999999999999999999999876644
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.9e-47 Score=376.89 Aligned_cols=264 Identities=26% Similarity=0.354 Sum_probs=216.8
Q ss_pred HhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchH----HHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSA----FVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
..+.|.+.+.||+|+||.|-+| ..++|+.||||+++........ ......+|+++|++++|||||++++++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3467888999999999999999 5668999999999876544311 2234569999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC---CcEEEeec
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN---LEASVADF 599 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Df 599 (740)
..||||||++||+|.+.+-..+ .+.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999987655 456666788999999999999999 99999999999999866 78999999
Q ss_pred ccceecccCCCcccccccCCCccccccccccc--c-CCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhc
Q 004642 600 GTARLLHVDSSYRTLRAGTYGYIAPELAYTIV--V-TGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLN 676 (740)
Q Consensus 600 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+|+... ........+||+.|.|||++.+.. + ..++|+||+||++|-+++|..||.... .+..+.+.+.
T Consensus 324 GlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~-------~~~sl~eQI~ 395 (475)
T KOG0615|consen 324 GLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY-------TDPSLKEQIL 395 (475)
T ss_pred chhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc-------CCccHHHHHh
Confidence 9999876 445566679999999999998654 3 347899999999999999999987532 2332333333
Q ss_pred ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 677 QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 677 ~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
+.--...+..|.+-..+..++|.+||..||++||++.|+++|-+....|
T Consensus 396 ~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 396 KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 3333333444556666689999999999999999999999999877555
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-45 Score=381.77 Aligned_cols=257 Identities=25% Similarity=0.411 Sum_probs=221.1
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.+|...+.||+|||+.+|+++. ..|+.||+|++.+.........+...+|+++.++++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999966 789999999999877666667789999999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
|+|++++|..++...+ ++++.++..+++||+.||.|||+. +|+|||||-.|++++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999998887433 799999999999999999999999 9999999999999999999999999999999877
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
.......+|||-|.|||++....++..+||||+||++|-|++|++||+...- .+....+.......+. ..
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-------kety~~Ik~~~Y~~P~--~l- 241 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-------KETYNKIKLNEYSMPS--HL- 241 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-------HHHHHHHHhcCccccc--cc-
Confidence 6666677999999999999999999999999999999999999999985321 1112222222222221 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
..+..++|.++|+.+|.+|||+++|+.+-.....
T Consensus 242 --s~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 242 --SAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred --CHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 2237799999999999999999999998876433
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-46 Score=353.29 Aligned_cols=260 Identities=25% Similarity=0.366 Sum_probs=212.8
Q ss_pred cccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeee-eeeecCe-EEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYG-FCLHKKC-MFL 526 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~l 526 (740)
.+|++.++||.|.||+||++ +..+|..+|.|.+.-. ..+....+....|+.++++++|||||++++ .+.++.. .++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 46888999999999999999 6779999999999843 344455788899999999999999999998 4545444 899
Q ss_pred EEEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 527 IYEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTL-SIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
||||+++|+|...+...+ +...+++..+++++.|++.||.++|.+++. -|+||||||.||+++.+|.+|++|||++++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999997654 345689999999999999999999995433 278999999999999999999999999999
Q ss_pred cccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc-CCCcc
Q 004642 605 LHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR-LSPPV 683 (740)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 683 (740)
+..........+|||.||+||.+.+..|+.||||||+||++|||+.-+.||....- ..+...+.+. .++-.
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~--------~~L~~KI~qgd~~~~p 249 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL--------LSLCKKIEQGDYPPLP 249 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH--------HHHHHHHHcCCCCCCc
Confidence 98777777888999999999999999999999999999999999999999875321 1222333332 22222
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
....... +..+|..|+..||+.||+.-.+++.+..
T Consensus 250 ~~~YS~~---l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 250 DEHYSTD---LRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHHhhhH---HHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 2333333 7889999999999999985555555544
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-45 Score=378.02 Aligned_cols=253 Identities=28% Similarity=0.505 Sum_probs=211.6
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+.+...+.||+|.||+||.|.+.....||+|.++..... .+.|.+|+++|++++|++||+++|+|..++..+||||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE 281 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE 281 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence 345567889999999999999988889999999886544 2578899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
||+.|+|.++|... ....+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+... ++
T Consensus 282 ~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~-d~ 356 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIG-DD 356 (468)
T ss_pred ecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccC-CC
Confidence 99999999999873 334688999999999999999999999 99999999999999999999999999999543 33
Q ss_pred Cccccc--ccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 610 SYRTLR--AGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 610 ~~~~~~--~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.+.... --+..|.|||.+....++.|||||||||+||||+| |+.|+..+. .....+.+.+..+.+.+..
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--------n~ev~~~le~GyRlp~P~~ 428 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--------NEEVLELLERGYRLPRPEG 428 (468)
T ss_pred ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--------HHHHHHHHhccCcCCCCCC
Confidence 322211 22678999999999999999999999999999999 888876543 2334455555555444443
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+ ..+.++|..||+.+|++||||+.+...+...
T Consensus 429 CP---~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 429 CP---DEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred CC---HHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 33 3488999999999999999999988887654
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-45 Score=360.78 Aligned_cols=255 Identities=26% Similarity=0.406 Sum_probs=215.6
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||+||.++. ++++.||+|++++....+....+....|..++.+++||+||+++..|++++..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 46899999999999999999954 46899999999987766665678889999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+||+.||.|..+|++.+ .+++..+.-++.+|+.||.|||++ +|+||||||+|||+|++|+++|+|||+++..-.
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999998765 588898999999999999999999 999999999999999999999999999996655
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
+.......+||+.|||||++.+..|+..+|.||+|+++|||++|..||.... ...+...+...++.. .+...
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-------~~~~~~~I~~~k~~~-~p~~l 249 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-------VKKMYDKILKGKLPL-PPGYL 249 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-------HHHHHHHHhcCcCCC-CCccC
Confidence 5555566799999999999999999999999999999999999999987532 233344444444221 11112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC----CHHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRP----TMQRISQELL 720 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RP----s~~ev~~~L~ 720 (740)
..+ ..+++.+.+..||++|- ++.++.+|-.
T Consensus 250 s~~---ardll~~LL~rdp~~RLg~~~d~~~ik~Hpf 283 (357)
T KOG0598|consen 250 SEE---ARDLLKKLLKRDPRQRLGGPGDAEEIKRHPF 283 (357)
T ss_pred CHH---HHHHHHHHhccCHHHhcCCCCChHHhhcCcc
Confidence 222 77899999999999995 5666555543
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-44 Score=358.19 Aligned_cols=202 Identities=29% Similarity=0.489 Sum_probs=181.3
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..+|.+.+.||.|+||+||+|+++ ++..||||.+....-. ...++-+..|+++++.++|||||.+++++..++..|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-KKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-HHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 457888889999999999999665 5899999999876532 33457788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC------CcEEEeeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN------LEASVADFGT 601 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~------~~~kl~DfG~ 601 (740)
||||.||+|.++++..+ .+++..+..++.|+|.||++||++ +||||||||+|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999999876 689999999999999999999999 99999999999999865 4589999999
Q ss_pred ceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcc
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLL 658 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~ 658 (740)
|+.+.. .......+|++.|||||++...+|+.|+|+||+|+|+|++++|+.||+..
T Consensus 162 AR~L~~-~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 162 ARFLQP-GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hhhCCc-hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 999874 33445569999999999999999999999999999999999999999854
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.7e-44 Score=341.59 Aligned_cols=264 Identities=25% Similarity=0.353 Sum_probs=207.8
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+.|+...++|+|+||.||+++.+ +|+.||||++.... .++...+-..+|++++++++|+|+|.++++|......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 46777888999999999999766 59999999997654 44566778899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++.- +.+-+..... .++...+.+++.|++.|+.|+|++ +++||||||+|||++.+|.+||||||+|+.+...
T Consensus 81 E~~dhT-vL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 81 EYCDHT-VLHELERYPN--GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eecchH-HHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 999984 4444444433 478889999999999999999999 9999999999999999999999999999998866
Q ss_pred CCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCcccccccC------CC-CCchhhhhhcc---
Q 004642 609 SSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS------SG-PKIMLIDVLNQ--- 677 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~------~~-~~~~~~~~~~~--- 677 (740)
....+..+.|..|+|||.+.+ .+|...+|||++||++.||++|..-|...++...- .+ -...-.+++..
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 666677789999999999987 78999999999999999999999887655432100 00 00000001000
Q ss_pred ----cCC-----CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 678 ----RLS-----PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 678 ----~l~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.++ .+.....+.....+.++++.|++.||++|++-+|++.+-.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~y 286 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPY 286 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChH
Confidence 011 1111112222234789999999999999999999987653
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=355.99 Aligned_cols=259 Identities=26% Similarity=0.391 Sum_probs=218.1
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (740)
..+|.+.+.||+|+|++|++| +..+++.||||++.+...-++..++-...|-++|.++ .||.|++++..|.+...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 467899999999999999999 4557999999999876655555566778899999999 89999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|+||+++|+|.++|++.+ .+++.....++.+|+.||+|||+. |||||||||+|||+|+|++++|+|||.|+.+.
T Consensus 152 vLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999876 688888999999999999999999 99999999999999999999999999999875
Q ss_pred cCCC-----------c--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhh
Q 004642 607 VDSS-----------Y--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLID 673 (740)
Q Consensus 607 ~~~~-----------~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 673 (740)
.... . ...++||..|.+||++.....++.+|+|+||||+|+|+.|+.||....+ ...+.+
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-------yliFqk 298 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-------YLIFQK 298 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-------HHHHHH
Confidence 3211 1 1347899999999999999999999999999999999999999986443 222333
Q ss_pred hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 674 VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 674 ~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
++.-....+ ....+ .+.+++.+.|..||.+|++.+|+.+|.......
T Consensus 299 I~~l~y~fp--~~fp~---~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 299 IQALDYEFP--EGFPE---DARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred HHHhcccCC--CCCCH---HHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 333222211 11122 277899999999999999999999998776543
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.7e-42 Score=374.65 Aligned_cols=260 Identities=27% Similarity=0.451 Sum_probs=212.0
Q ss_pred hcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
..+....+.||+|.||+||+|+.. +...||||.++..... ...++|++|++++..++|||||+++|.|.+++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~--~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN--QARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH--HHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 445566788999999999999643 3467999999876654 34689999999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCC-------c----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 004642 523 CMFLIYEYMERGSLFCVLHDDD-------E----AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN 591 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~-------~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 591 (740)
.+++|+|||..|+|.++|.... . ..+++..+.+.||.|||.||+||-++ .+|||||..+|+||.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 9999999999999999985321 1 23489999999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCCCccc--ccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCC
Q 004642 592 LEASVADFGTARLLHVDSSYRT--LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPK 668 (740)
Q Consensus 592 ~~~kl~DfG~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~ 668 (740)
..|||+|||+++..-..+.+.. ...-+.+|||||.+..++++++||||||||+|||+++ |+.|+...+ ..
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS-------n~ 712 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS-------NQ 712 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc-------hH
Confidence 9999999999987643333321 1234689999999999999999999999999999998 999966433 23
Q ss_pred chhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 669 IMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 669 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
+.+..+-...+- +-+ ..+..+++.||..||+..|.+||+++||-..|+.-..
T Consensus 713 EVIe~i~~g~lL-~~P---e~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 713 EVIECIRAGQLL-SCP---ENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHHHcCCcc-cCC---CCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 334333333331 111 2333448999999999999999999999999987644
No 14
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-41 Score=321.19 Aligned_cols=281 Identities=26% Similarity=0.370 Sum_probs=222.8
Q ss_pred cccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.+|...+.+|+|.||.||+| +..+|+.||||+++.....+. .-....+|++.++.++|+||+.++++|.+.+..-+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 46777889999999999999 566899999999988755433 2356789999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++. +|+..+.+.. ..++..++..++.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 81 Efm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred Eeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 99986 8998887654 3688899999999999999999999 9999999999999999999999999999998876
Q ss_pred CCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCCc-----hh--
Q 004642 609 SSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPKI-----ML-- 671 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~~-----~~-- 671 (740)
....+..+-|..|+|||.+.|. .|+..+||||.|||+.||+-|.+-|...++++. .+..+. .+
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 6666666789999999998865 588999999999999999999887765443210 000000 00
Q ss_pred hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChhhhhcccccc
Q 004642 672 IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQKALKEISISE 737 (740)
Q Consensus 672 ~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~~~~~~~ 737 (740)
...+.+...++.............+++..++..||.+|++++|++++--....|.+..-.++....
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~ 300 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPS 300 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCc
Confidence 111111111211111222333368999999999999999999999998887777777666665543
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-42 Score=347.32 Aligned_cols=257 Identities=26% Similarity=0.424 Sum_probs=205.9
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC--eEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK--CMFL 526 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 526 (740)
.+|...+.||+|+||+||++... +|+..|||.+....... .+.+.+|+.++.+++|||||+++|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~---~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT---SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh---HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 45667788999999999999654 49999999997763221 577899999999999999999999865554 6999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCcEEEeecccceec
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-NLEASVADFGTARLL 605 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~DfG~a~~~ 605 (740)
.|||+++|+|.+++.+.+. .+++..+..+.+||+.||+|||++ ||+||||||+|||++. ++.+||+|||.++..
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999988765 589999999999999999999999 9999999999999999 799999999999876
Q ss_pred ccC---CCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 606 HVD---SSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 606 ~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
... ........||+.|||||++..+ ....++||||+||++.||+||+.||... .........+......+
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~------~~~~~~~~~ig~~~~~P 242 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF------FEEAEALLLIGREDSLP 242 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh------cchHHHHHHHhccCCCC
Confidence 531 1223346899999999999853 3345899999999999999999997642 11111122222222222
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
..+....+ ...+++.+|+..||++||||++++++.....
T Consensus 243 ~ip~~ls~---~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 243 EIPDSLSD---EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CCCcccCH---HHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 23332233 3789999999999999999999999997754
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-42 Score=356.90 Aligned_cols=266 Identities=27% Similarity=0.441 Sum_probs=215.0
Q ss_pred HHHHHHhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 443 EDLINATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 443 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
++++...+++.+...||+|.||+||+|+|. | .||||++......++ ..+.|+.|+.++++-+|.||+-+.|||..+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 555566677788899999999999999884 3 599999998776655 6799999999999999999999999999988
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
. .||+.||+|.+|+.++|-.+. .++..+...|++|||+||.|||.+ +|||||||..||++.++++|||+|||++
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred e-eeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccce
Confidence 7 999999999999999997664 688899999999999999999999 9999999999999999999999999999
Q ss_pred eecccC--CCcccccccCCCccccccccc---cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcc
Q 004642 603 RLLHVD--SSYRTLRAGTYGYIAPELAYT---IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQ 677 (740)
Q Consensus 603 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
.....- ........|...|||||++.. .+|++.+||||||+++|||+||..||.... .+..+..+-..
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-------~dqIifmVGrG 608 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-------RDQIIFMVGRG 608 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-------hhheEEEeccc
Confidence 764322 111222357889999999874 468899999999999999999999987321 12222222222
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 678 RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 678 ~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.+.+........+..++.+++..||..+|++||.+.+++..|+..-.
T Consensus 609 ~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 22222222222333358899999999999999999999998766533
No 17
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=338.11 Aligned_cols=263 Identities=25% Similarity=0.399 Sum_probs=213.4
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++...||.|..++||+| ..+.+..||||++..+..... .+.+.+|++.|+.++||||++++..|..+...|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 468999999999999999999 567789999999988776644 68899999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|.||.+|++.+++...-.. .+++..+..|.+++++||.|||++ |.||||||+.|||++.+|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred ehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 9999999999999764332 388999999999999999999999 999999999999999999999999998877654
Q ss_pred CCCcc----cccccCCCccccccccc--cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCC-
Q 004642 608 DSSYR----TLRAGTYGYIAPELAYT--IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLS- 680 (740)
Q Consensus 608 ~~~~~----~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~- 680 (740)
..... ...+||++|||||+++. ..|+.|+||||||++..||.+|..||...... +++...+....+
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-------kvLl~tLqn~pp~ 251 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-------KVLLLTLQNDPPT 251 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-------HHHHHHhcCCCCC
Confidence 32221 34589999999999653 35899999999999999999999998754321 122222222221
Q ss_pred ----CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 681 ----PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 681 ----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.............+.+++..|+..||++|||+++++++-.....
T Consensus 252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 00111111112248899999999999999999999998766543
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=354.15 Aligned_cols=261 Identities=24% Similarity=0.337 Sum_probs=217.3
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
...|....+||+|+.|.||.+ +..+++.||||++.......+ +-+.+|+.+|+..+|+|||.+++.|..++..|+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k---eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK---ELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch---hhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 456777788999999999999 566789999999987665543 4568999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
||||+||+|.+.+... .+++.++..|++++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++..+..
T Consensus 349 MEym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EeecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 9999999999998765 489999999999999999999999 999999999999999999999999999998877
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
........+||++|||||+.....|.+|+||||||++++||+-|..||-.... -..+.-+.+...+. ....
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-------lrAlyLIa~ng~P~--lk~~ 492 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-------LRALYLIATNGTPK--LKNP 492 (550)
T ss_pred ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-------HHHHHHHhhcCCCC--cCCc
Confidence 66666677999999999999999999999999999999999999999753221 11122222221111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChh
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQK 728 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 728 (740)
..-...+.+|+.+||..||++||++.|+++|-........+
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~s 533 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPES 533 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHH
Confidence 22233489999999999999999999999998775444433
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-42 Score=349.68 Aligned_cols=266 Identities=23% Similarity=0.325 Sum_probs=213.9
Q ss_pred HhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecC-eE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKK-CM 524 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~ 524 (740)
..++|.+.++||.|.||+||+|+ ..+|..||||+++.....-++. .=.+|++.++++. |||||++.+.+.+.+ ..
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~--~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC--MNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH--HHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 45789999999999999999994 5578999999998877664432 2358999999998 999999999999988 99
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++|||||+. +|++++.+. ...+++.++..|+.||++||+|+|++ |+.|||+||+|||+.....+||+|||+||.
T Consensus 86 ~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 999999986 999999876 34799999999999999999999999 999999999999999888999999999998
Q ss_pred cccCCCcccccccCCCcccccccc-ccccCCcchhHhHHHHHHHHHhCCCCCCcccccc---------cCCC-----CCc
Q 004642 605 LHVDSSYRTLRAGTYGYIAPELAY-TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS---------SSSG-----PKI 669 (740)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~---------~~~~-----~~~ 669 (740)
+...+.+ +..+.|..|+|||++. .+.|+.+.|||++|||++|+.+-+.-|...++.+ .... ...
T Consensus 160 v~SkpPY-TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 160 VRSKPPY-TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred cccCCCc-chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 8654444 4557899999999875 6679999999999999999999998887654421 0111 112
Q ss_pred hhhhhhcccCCCcc----hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 670 MLIDVLNQRLSPPV----NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 670 ~~~~~~~~~l~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+...+.-..+... ............+++.+|+++||++||||+|.+++....
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq 295 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQ 295 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccc
Confidence 22333333332211 111223344588999999999999999999999987654
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-41 Score=346.41 Aligned_cols=268 Identities=28% Similarity=0.390 Sum_probs=209.2
Q ss_pred cccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCMFL 526 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 526 (740)
+.|+..++||+|.||.||+| +..+|+.||+|++...... ++...-..+|+.++++++||||+++.+...+. +..||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 45667788999999999999 5668999999999876543 34456778999999999999999999999876 78999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|+|||++ +|.-++...+ ..++..++..+++|++.||+|+|.+ ||+|||||.+|||+|.+|.+||+|||+|+++.
T Consensus 196 VFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999998 7877776543 3689999999999999999999999 99999999999999999999999999999887
Q ss_pred cCCCc-ccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccc---------cCCCCCchhhhhh
Q 004642 607 VDSSY-RTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS---------SSSGPKIMLIDVL 675 (740)
Q Consensus 607 ~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~---------~~~~~~~~~~~~~ 675 (740)
..... .+.++-|..|+|||.+.|. .|+.++|+||.|||+.||++|+..|....+.. .....+.+....+
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 65433 5777889999999999865 69999999999999999999999987654321 0111111110000
Q ss_pred c----ccCCCcchhhhHHH----HHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 676 N----QRLSPPVNQKIVQD----IILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 676 ~----~~l~~~~~~~~~~~----~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
. .....++.....+. .....+++..+|..||++|.||.++++.=.....
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 0 00011111111111 1126689999999999999999999987665433
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=317.58 Aligned_cols=249 Identities=26% Similarity=0.354 Sum_probs=211.5
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||.|+||.|.+++.+ +|..||+|++.....-+....+...+|..+++.+.||+++++++.+.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 57888999999999999999655 58899999999887777666778889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++||.|.+++++.+ ++++..+..+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|+.....
T Consensus 124 eyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 9999999999998765 688999999999999999999999 9999999999999999999999999999987532
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
....+||+.|+|||++.+..+..++|.|||||++|||+.|..||..... ......++...+..+..- .
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-------~~iY~KI~~~~v~fP~~f--s 265 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-------IQIYEKILEGKVKFPSYF--S 265 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-------HHHHHHHHhCcccCCccc--C
Confidence 3345999999999999999999999999999999999999999875332 334445555555433321 1
Q ss_pred HHHHHHHHHHHHcccCCCCCC-----CCHHHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSR-----PTMQRISQEL 719 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~R-----Ps~~ev~~~L 719 (740)
. .+.+++.+.++.|-.+| +...+|..|-
T Consensus 266 ~---~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~ 298 (355)
T KOG0616|consen 266 S---DAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHP 298 (355)
T ss_pred H---HHHHHHHHHHhhhhHhhhcCcCCCccccccCc
Confidence 1 27789999999999998 2444554444
No 22
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=360.75 Aligned_cols=268 Identities=30% Similarity=0.437 Sum_probs=222.3
Q ss_pred CCcccHHHHHHHhc---------ccccceeeecccceEEEEEEeCC----CcEEEEEEccCCcccchHHHHHHHHHHHHH
Q 004642 437 DGKILYEDLINATE---------DFHIKYCIGTGGYGSVYKAELPE----GKVVALKKLHHSETEDSAFVKSFQNEAHVL 503 (740)
Q Consensus 437 ~~~~~~~~l~~~~~---------~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l 503 (740)
..+++|+|-..+.. ...+.++||.|.||+||+|+++- ...||||.++....++ ...+|..|+.+|
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek--qrrdFL~EAsIM 684 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK--QRRDFLSEASIM 684 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHH--HHhhhhhhhhhc
Confidence 34556665544433 34677899999999999997652 3569999999876553 358999999999
Q ss_pred hccCCCccceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 004642 504 STVRHRNIVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISS 583 (740)
Q Consensus 504 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 583 (740)
.+++||||+++.|+.......+||.|||++|+|+.+|...++ ++++.+...+.++||.||+||-+. ++|||||.+
T Consensus 685 GQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAA 759 (996)
T KOG0196|consen 685 GQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAA 759 (996)
T ss_pred ccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhh
Confidence 999999999999999999999999999999999999988775 589999999999999999999988 999999999
Q ss_pred CceEEcCCCcEEEeecccceecccCCCc-cccccc--CCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCccc
Q 004642 584 NNILLDSNLEASVADFGTARLLHVDSSY-RTLRAG--TYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLS 659 (740)
Q Consensus 584 ~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~ 659 (740)
+|||++.+..+||+|||+++.+..++.. .+...| +.+|.|||.+...+++.+|||||||+++||.++ |..|+..++
T Consensus 760 RNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS 839 (996)
T KOG0196|consen 760 RNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 839 (996)
T ss_pred hheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc
Confidence 9999999999999999999988766532 233233 579999999999999999999999999999997 999976543
Q ss_pred ccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 660 SLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+.+..+-+.+. .+...+.+++..||++|-.+||.|.|++.+|.+.
T Consensus 840 --------NQdVIkaIe~gyRLPpPm---DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 840 --------NQDVIKAIEQGYRLPPPM---DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred --------hHHHHHHHHhccCCCCCC---CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 233444455544433333 3444599999999999999999999999999764
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=348.13 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=211.2
Q ss_pred HhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCccc-c-hHHHHHHHHHHHHHhccC-CCccceeeeeeeecCe
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETE-D-SAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKC 523 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 523 (740)
....|.+.+.||+|.||+|+.|. ..+|+.||+|++...... . ....+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 35689999999999999999994 457899999977664222 1 123456678999999998 9999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CcEEEeecccc
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN-LEASVADFGTA 602 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~DfG~a 602 (740)
.++||||+.||+|.+++.+.+ ++.+.++..++.|++.|++|+|+. ||+||||||+|||++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999998733 678899999999999999999999 99999999999999999 99999999999
Q ss_pred eecccCCCcccccccCCCccccccccccc-cC-CcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 603 RLLHVDSSYRTLRAGTYGYIAPELAYTIV-VT-GKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
.............+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+.... ......+......
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~-------~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV-------PNLYRKIRKGEFK 241 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH-------HHHHHHHhcCCcc
Confidence 98743344455669999999999999877 76 679999999999999999999986221 1122222222222
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.+.... ...+..++.+|+..||.+|+++.|++++-+...
T Consensus 242 ~p~~~~----S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 242 IPSYLL----SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCCCcC----CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 221110 233789999999999999999999998877665
No 24
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5e-40 Score=351.39 Aligned_cols=260 Identities=27% Similarity=0.402 Sum_probs=202.6
Q ss_pred HhcccccceeeecccceEEEEEEe------CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeee
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL------PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLH 520 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 520 (740)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|++++.++ +||||+++++++..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATA--SEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccch--HHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 356899999999999999999953 23578999999754322 2346788999999999 89999999998876
Q ss_pred c-CeEEEEEEeccCCCchhhhcCCCc------------------------------------------------------
Q 004642 521 K-KCMFLIYEYMERGSLFCVLHDDDE------------------------------------------------------ 545 (740)
Q Consensus 521 ~-~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------ 545 (740)
. +..+++|||+++|+|.+++.....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4 458999999999999998864321
Q ss_pred -----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc--ccccccC
Q 004642 546 -----AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY--RTLRAGT 618 (740)
Q Consensus 546 -----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt 618 (740)
...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....+... .....++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 12478889999999999999999998 9999999999999999999999999999865433221 1223456
Q ss_pred CCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHH
Q 004642 619 YGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTI 697 (740)
Q Consensus 619 ~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l 697 (740)
..|+|||++.+..++.++|||||||++|||++ |+.||..... .......+.......... .....+.++
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~l~~l 309 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-------NEEFCQRLKDGTRMRAPE---NATPEIYRI 309 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc-------cHHHHHHHhcCCCCCCCC---CCCHHHHHH
Confidence 88999999999899999999999999999997 9999864321 111111111111111111 112237899
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 698 AFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 698 i~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+.+||+.||++||++.|+++.|+..
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999999764
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.4e-41 Score=343.64 Aligned_cols=252 Identities=28% Similarity=0.422 Sum_probs=214.4
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|.+.+.||+|.||.||||+. .+.+.||+|.+.+....+++ .+.+.+|+++++.++|||||.++++|+...+.++|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~-l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKE-LKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHH-HHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 5788888999999999999954 46889999999877665544 678999999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+.| +|..++...+ .++++.+..++.|++.||.|||+. +|+|||+||+|||++..+.+|++|||+|+.+...
T Consensus 81 e~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 99988 9999997655 689999999999999999999999 9999999999999999999999999999999877
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
....+..-||+.|||||...+..|+..+|.||+||++||+++|++||-..+-. .....++.....++.
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~-------~Lv~~I~~d~v~~p~----- 221 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT-------QLVKSILKDPVKPPS----- 221 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH-------HHHHHHhcCCCCCcc-----
Confidence 77777788999999999999999999999999999999999999998642210 011111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+..++...+.+||.+|.+-.+++.|-.-
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~ 254 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFW 254 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcChHH
Confidence 223348899999999999999999999988643
No 26
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-41 Score=339.07 Aligned_cols=255 Identities=30% Similarity=0.449 Sum_probs=213.6
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
...|+..+.||+|.||.||+| +...++.||+|++......++ ...+.+|+.++.+++++||.++||.+..+..++++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de--Iediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE--IEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchh--hHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 345677788999999999999 556789999999988766543 57889999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+.||++.+.+.... .+++..+.-+++++..|+.|||.+ +.+|||||+.||++..+|.+|++|||.+..+..
T Consensus 90 Mey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 99999999999997654 346677777899999999999999 999999999999999999999999999998876
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
........+||+.|||||++....|+.|+||||||++.+||.+|.+|+...... ...-.+.+..+|....
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm--------rvlflIpk~~PP~L~~-- 233 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM--------RVLFLIPKSAPPRLDG-- 233 (467)
T ss_pred hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc--------eEEEeccCCCCCcccc--
Confidence 666667779999999999999889999999999999999999999997654321 1111122222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+|+..|+..+|+.||+|.+++++=.-.
T Consensus 234 -~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk 267 (467)
T KOG0201|consen 234 -DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIK 267 (467)
T ss_pred -ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHH
Confidence 2233488999999999999999999999986543
No 27
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-41 Score=345.08 Aligned_cols=242 Identities=30% Similarity=0.476 Sum_probs=201.1
Q ss_pred ceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 455 KYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
.+-||.|+.|.||+|++ .++.||||+++... ..+++-+++++||||+.+.|+|.....++||||||+.|
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhh----------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 56799999999999998 57889999996433 25788899999999999999999999999999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccc
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTL 614 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 614 (740)
-|+..|.... .+.......+.++||.||.|||.+ .|||||||.-|||++.+..|||+|||-++..... .....
T Consensus 198 qL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMS 270 (904)
T KOG4721|consen 198 QLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMS 270 (904)
T ss_pred cHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhh
Confidence 9999998655 577788899999999999999999 9999999999999999999999999999876543 45566
Q ss_pred cccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHH
Q 004642 615 RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILV 694 (740)
Q Consensus 615 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 694 (740)
++||..|||||++...+.++|+||||||||||||+||..||..........+ +-...+.-+.+. .+..-+
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG-------VGsNsL~LpvPs---tcP~Gf 340 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG-------VGSNSLHLPVPS---TCPDGF 340 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe-------ccCCcccccCcc---cCchHH
Confidence 7999999999999999999999999999999999999999876543111111 001111111111 122226
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 695 STIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 695 ~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.-+++.||+..|..||+|++++.||...++
T Consensus 341 klL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 341 KLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 678999999999999999999999987754
No 28
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.4e-39 Score=339.12 Aligned_cols=259 Identities=22% Similarity=0.274 Sum_probs=204.5
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|+..+.||+|+||.||++.. .+|+.||+|.+.............+.+|++++.+++|++++++++++.+++..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377789999999999999954 5789999999876543333334567889999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999888764332 2588999999999999999999998 99999999999999999999999999998754322
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
......||..|+|||++.+..++.++||||+||++|||++|+.||....... ........+.. .........
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~----~~~~~~~~~~~-~~~~~~~~~-- 228 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV----KREEVDRRVKE-DQEEYSEKF-- 228 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch----hHHHHHHHhhc-ccccCCccC--
Confidence 2234478999999999999999999999999999999999999987532110 00011111111 011111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHcC
Q 004642 690 DIILVSTIAFACLSSQPKSRPT-----MQRISQELLAG 722 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~L~~~ 722 (740)
...+.+++.+||+.||++||+ ++|++++-...
T Consensus 229 -s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~ 265 (285)
T cd05631 229 -SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFK 265 (285)
T ss_pred -CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhc
Confidence 223788999999999999997 89999876544
No 29
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=336.18 Aligned_cols=248 Identities=23% Similarity=0.312 Sum_probs=201.9
Q ss_pred eeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee----cCeEEEEEEec
Q 004642 456 YCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH----KKCMFLIYEYM 531 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 531 (740)
..||+|++|.||+|.. +|+.||||++...........+.+.+|++++.+++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 6799999999999987 789999999987655555556788999999999999999999999877 34689999999
Q ss_pred cCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc
Q 004642 532 ERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY 611 (740)
Q Consensus 532 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 611 (740)
++|+|.+++.... .+++.....++.|++.|++|||+. .+++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 9999999997643 588999999999999999999973 178899999999999999999999999998653221
Q ss_pred ccccccCCCccccccccc--cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 612 RTLRAGTYGYIAPELAYT--IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 612 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.........+. .
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~---~ 246 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-------KEIYDLIINKNNSLKLPL---D 246 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcCCCCCCCC---c
Confidence 23468899999999876 6789999999999999999999999875321 111122222222222211 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....+.+++.+||+.||++|||++|+++.|...
T Consensus 247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 247 CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 223488999999999999999999999999765
No 30
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-40 Score=345.38 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=213.0
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.-|...+.||+|+-|.|-.|++ .+|+.+|||++.......+.....+.+|+-+|+-+.|||++++|+.++++.++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4567788899999999999954 579999999998774444444567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|.|++++-..+ ++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|..-..+
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999997765 688999999999999999999998 9999999999999999999999999999865443
Q ss_pred CCcccccccCCCccccccccccccC-CcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVT-GKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
......||++.|.|||+++|.+|. .++||||.|||||.|+||+.||++... ...+..+.......+. .+
T Consensus 166 -klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi-------r~LLlKV~~G~f~MPs--~I 235 (786)
T KOG0588|consen 166 -KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI-------RVLLLKVQRGVFEMPS--NI 235 (786)
T ss_pred -ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH-------HHHHHHHHcCcccCCC--cC
Confidence 344455999999999999999886 479999999999999999999985221 1222222222222221 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
. .+..+++.+|+..||+.|.|++||++|..-.+-
T Consensus 236 s---~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 236 S---SEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred C---HHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 2 237899999999999999999999999876543
No 31
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.4e-40 Score=318.97 Aligned_cols=268 Identities=24% Similarity=0.276 Sum_probs=212.9
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cCeEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KKCMF 525 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 525 (740)
.++|+..+.|++|.||.||+|+. ++++.||+|+++.....+ .+--...+|+.++.+.+|||||.+-.+... -+..|
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 45788899999999999999954 468899999998766433 222345789999999999999999888764 45799
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+||||+++ +|..+++...+ ++...++..++.|+++|++|||+. .|+||||||+|+|+++.|.+||+|||+|+.+
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeHHHHHh-hHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 99999998 89999987764 688899999999999999999999 9999999999999999999999999999999
Q ss_pred ccCCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccc------------------cCCC
Q 004642 606 HVDSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS------------------SSSG 666 (740)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~------------------~~~~ 666 (740)
.......+..+-|..|+|||.+.+. .|+++.|+||+|||+.||+++++-|...+++. ....
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 8776667777889999999998875 58999999999999999999998876554311 0000
Q ss_pred CCch--------hhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChhh
Q 004642 667 PKIM--------LIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQKA 729 (740)
Q Consensus 667 ~~~~--------~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 729 (740)
...+ ....+.+..... .-...-.+++...+..||++|.||.|.+++=...+.|.+..
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~------~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~ 372 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGAL------SLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPID 372 (419)
T ss_pred cchhhccccCCCCchhhhhhcccc------ccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCC
Confidence 0000 001111111110 01123678999999999999999999999988887666554
No 32
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.9e-40 Score=326.16 Aligned_cols=254 Identities=24% Similarity=0.428 Sum_probs=217.9
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..+|++.+.||+|.||.|-++ ....|+.||||.+++....++.-.-.+.+|+++|..++||||+.+|.+|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 357888899999999999999 5578999999999998888877677889999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||..+|.|++++.+.+ .+++.+...+++||..|+.|+|++ +++|||||-+|||+|+++++||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc-
Confidence 99999999999998765 689999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCcccccccCCCccccccccccccC-CcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVT-GKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
+......++|++-|.+||++.+.+|. +.+|-||+||+||-++.|..||+.... ...+..+-......+...
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-------k~lvrQIs~GaYrEP~~P- 276 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-------KRLVRQISRGAYREPETP- 276 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-------HHHHHHhhcccccCCCCC-
Confidence 45556677999999999999999885 579999999999999999999986432 222222222222221111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.. ..-+|++|+..+|++|.|..++..|++-.
T Consensus 277 --Sd---A~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 277 --SD---ASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred --ch---HHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 11 45689999999999999999999999654
No 33
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-40 Score=349.11 Aligned_cols=264 Identities=27% Similarity=0.429 Sum_probs=211.5
Q ss_pred HHhcccccceeeecccceEEEEEEeCC--C--cE-EEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELPE--G--KV-VALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK 521 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~--g--~~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (740)
...++....++||+|+||.||+|.+.. + .. ||||..+..........++|++|+++|++++|||||++||++...
T Consensus 154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE 233 (474)
T ss_pred EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence 334555666899999999999996543 3 23 899999875544456678999999999999999999999999999
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
...++|||+|+||+|.++|.+.+. .++..++..++.+.|.||+|||++ +++||||.++|+|++.++.+||+|||+
T Consensus 234 ~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGL 308 (474)
T KOG0194|consen 234 EPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGL 308 (474)
T ss_pred CccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccc
Confidence 999999999999999999998765 589999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
++.-..-.......--+.+|+|||.+..+.+++++|||||||++||+++ |..||...... .....+.....+
T Consensus 309 s~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-------~v~~kI~~~~~r 381 (474)
T KOG0194|consen 309 SRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-------EVKAKIVKNGYR 381 (474)
T ss_pred ccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-------HHHHHHHhcCcc
Confidence 8754210001111134689999999999999999999999999999999 88897754431 222223232333
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
.+.+...+. .+..++.+||..+|++||+|.++.+.+......
T Consensus 382 ~~~~~~~p~---~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 382 MPIPSKTPK---ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred CCCCCCCHH---HHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 222222223 377888999999999999999999999876543
No 34
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2e-39 Score=343.95 Aligned_cols=248 Identities=23% Similarity=0.291 Sum_probs=200.9
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
+.||+|+||.||++.. .+|+.||+|++.............+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999955 478999999997654333344567788999999999999999999999999999999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccc
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTL 614 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 614 (740)
+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 9998887543 578999999999999999999998 9999999999999999999999999999764333333344
Q ss_pred cccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHH
Q 004642 615 RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILV 694 (740)
Q Consensus 615 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 694 (740)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+ ... ...+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~~~~~~~~~p--~~~---~~~~ 222 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEIRFP--RTL---SPEA 222 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCC---CHHH
Confidence 5799999999999998999999999999999999999999864221 111111221211111 111 2237
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 695 STIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 695 ~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
.+++.+||+.||++|| ++.+++++-..
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f 254 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF 254 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHcCCCc
Confidence 8999999999999999 89999887543
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=334.63 Aligned_cols=258 Identities=27% Similarity=0.385 Sum_probs=212.3
Q ss_pred HhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
..++|++.+.||+|+||+||.|+ ..+|..+|+|++++........++-...|..+|....+|.||+++..|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 35799999999999999999994 45799999999998877777777888999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||++||++..+|.+.+ .+++..+..++.+++-|++.+|+. |+|||||||+|+|+|..|++||+|||++.-+.
T Consensus 219 iMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999998766 688899999999999999999999 99999999999999999999999999985321
Q ss_pred c---------------------CCC-c-----c--------------------cccccCCCccccccccccccCCcchhH
Q 004642 607 V---------------------DSS-Y-----R--------------------TLRAGTYGYIAPELAYTIVVTGKCDVY 639 (740)
Q Consensus 607 ~---------------------~~~-~-----~--------------------~~~~gt~~y~aPE~~~~~~~~~~~Dvw 639 (740)
. +.. . . ...+|||-|||||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 0 000 0 0 013599999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc--CCCcchhhhHHHHHHHHHHHHHcccCCCCCCC---CHHH
Q 004642 640 SFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR--LSPPVNQKIVQDIILVSTIAFACLSSQPKSRP---TMQR 714 (740)
Q Consensus 640 slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~e 714 (740)
|+|||+|||+.|.+||..... ......++.-+ +..+...... .+..++|.+|+. ||++|- .++|
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp-------~~T~rkI~nwr~~l~fP~~~~~s---~eA~DLI~rll~-d~~~RLG~~G~~E 441 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETP-------QETYRKIVNWRETLKFPEEVDLS---DEAKDLITRLLC-DPENRLGSKGAEE 441 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHHhhhccCCCcCccc---HHHHHHHHHHhc-CHHHhcCcccHHH
Confidence 999999999999999875332 22222332222 2222222222 347899999999 999995 6899
Q ss_pred HHHHHHcC
Q 004642 715 ISQELLAG 722 (740)
Q Consensus 715 v~~~L~~~ 722 (740)
|.+|....
T Consensus 442 IK~HPfF~ 449 (550)
T KOG0605|consen 442 IKKHPFFK 449 (550)
T ss_pred HhcCCccc
Confidence 98887654
No 36
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.6e-39 Score=338.06 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=206.1
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +|+.||+|++......+....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46889999999999999999654 68999999997544333334567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999987643 578899999999999999999998 9999999999999999999999999999765422
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.. .
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~--~- 221 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-------FGIYEKILAGKLEFPRH--L- 221 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCcCCCcc--C-
Confidence 2234689999999999988899999999999999999999999864321 11122222222221111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPT-----MQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~L~~~ 722 (740)
...+.+++.+||+.||.+||+ ++|++++....
T Consensus 222 --~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 222 --DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred --CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 223789999999999999995 99999887554
No 37
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.3e-40 Score=339.35 Aligned_cols=254 Identities=21% Similarity=0.360 Sum_probs=217.6
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe-EEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC-MFLI 527 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv 527 (740)
++|...+++|+|+||.++.++++ +++.||+|++......+.+ .+...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 57889999999999999999554 5789999999887766554 3578899999999999999999999999998 9999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|+|++||++.+.+.+.. ...++++++..++.|++.|+.|||++ .|+|||||+.||+++.++.|+|+|||+|+.+..
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999998765 34689999999999999999999988 999999999999999999999999999999987
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
+.......+||+.||.||.+.+.+|..|+||||+||++|||++-+++|..... ..-+.++.... ..+.+..+
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-------~~Li~ki~~~~-~~Plp~~y 230 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-------SELILKINRGL-YSPLPSMY 230 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-------HHHHHHHhhcc-CCCCCccc
Confidence 77666777999999999999999999999999999999999999999875332 12222333222 22233223
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
. ..+..++..|+..+|+.||++.+++.+.
T Consensus 231 s---~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 231 S---SELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred c---HHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 3 3388999999999999999999999873
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8e-39 Score=345.90 Aligned_cols=259 Identities=26% Similarity=0.390 Sum_probs=204.3
Q ss_pred HhcccccceeeecccceEEEEEEe------CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeee
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL------PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLH 520 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 520 (740)
..++|++.+.||+|+||.||+|.+ .++..||||+++..... ...+.+.+|++++..+ +||||+++++++.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc--HHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 346799999999999999999953 24668999999754432 2246788999999999 89999999999999
Q ss_pred cCeEEEEEEeccCCCchhhhcCCCc-------------------------------------------------------
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDDDE------------------------------------------------------- 545 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 545 (740)
++..++||||+++|+|.++++....
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 9999999999999999998864321
Q ss_pred -----------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 546 -----------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 546 -----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 12478999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 609 SSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 609 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
... .....++..|+|||++.+..++.++|||||||++|||++ |..||..... .......+........+.
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~ 340 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-------DSKFYKMIKEGYRMLSPE 340 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-------hHHHHHHHHhCccCCCCC
Confidence 221 112235678999999999999999999999999999998 8888764321 111222222222111111
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.. ...+.+++.+||+.||++||++.|+++.|+.
T Consensus 341 ~~---~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 341 CA---PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CC---CHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 11 1237899999999999999999999999975
No 39
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=335.25 Aligned_cols=264 Identities=26% Similarity=0.364 Sum_probs=211.3
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.+...++++||+|.||+|..+....+..||||+++..... ..+++|.+|+++|.+++|||||.++|+|..++..++++
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK--NARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccch--hHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 4566778999999999999999877899999999876654 33689999999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
|||++|+|..++..+... ........+|+.||+.||+||.+- .+||||+.++|+|++.++++||+|||+++.+-..
T Consensus 615 EYmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC
Confidence 999999999999876432 245566778999999999999988 9999999999999999999999999999865444
Q ss_pred CCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh--CCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 609 SSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM--GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 609 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
+.+. ...+-+.+|||||.+.-+++++++|||+||+++||+++ ...||........ .+...+.++........
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v----ven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV----VENAGEFFRDQGRQVVL 766 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH----HHhhhhhcCCCCcceec
Confidence 3332 22345789999999999999999999999999999987 6778775443111 01111222222222222
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....-+...+.+++.+||..|-++||+++++...|++.
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 22222333478999999999999999999999998764
No 40
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.6e-39 Score=342.06 Aligned_cols=252 Identities=23% Similarity=0.295 Sum_probs=206.2
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +|+.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57899999999999999999664 68999999997654333334567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999987643 578888999999999999999998 9999999999999999999999999999876432
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....+..+.. .
T Consensus 172 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-------~~~~~~i~~~~~~~p~~--~- 238 (329)
T PTZ00263 172 T---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-------FRIYEKILAGRLKFPNW--F- 238 (329)
T ss_pred c---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-------HHHHHHHhcCCcCCCCC--C-
Confidence 1 234789999999999998899999999999999999999999864321 11112222222221111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPT-----MQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~L~~~ 722 (740)
...+.+++.+||+.||++||+ ++++++|-...
T Consensus 239 --~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~ 275 (329)
T PTZ00263 239 --DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFH 275 (329)
T ss_pred --CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccC
Confidence 123779999999999999986 78988886543
No 41
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=9e-39 Score=336.44 Aligned_cols=263 Identities=24% Similarity=0.354 Sum_probs=199.5
Q ss_pred hcccccceeeecccceEEEEEEeCC-----------------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCcc
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE-----------------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNI 511 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 511 (740)
.++|.+.+.||+|+||.||+|.+++ +..||+|.+..... ....+.+.+|++++.+++||||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--KNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCe
Confidence 3578899999999999999996532 34699999876433 2335688999999999999999
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchhhhcCCC----------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDD----------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLS 575 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 575 (740)
+++++++.+.+..++||||+++|+|.+++.... ....+++.++..++.||+.||+|||+. +
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ 158 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---N 158 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---C
Confidence 999999999999999999999999999885421 112478899999999999999999998 9
Q ss_pred eEecCCCCCceEEcCCCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh--C
Q 004642 576 IIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM--G 651 (740)
Q Consensus 576 ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g 651 (740)
|+||||||+||+++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ +
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 999999999999999999999999999865432221 122345789999999988889999999999999999997 4
Q ss_pred CCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 652 THPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 652 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
..||....... ...........................+.+++.+||+.||++||++.|+.+.|.
T Consensus 239 ~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 239 EQPYGELTDEQ----VIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCcCCHHH----HHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 56665322100 000000111110000000000111223789999999999999999999998875
No 42
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-39 Score=325.35 Aligned_cols=267 Identities=25% Similarity=0.414 Sum_probs=210.8
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhc--cCCCccceeeeeeeecC----e
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLST--VRHRNIVKLYGFCLHKK----C 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~ 523 (740)
...+..+.||+|+||.||+|.+ +++.||||++.... .+.|..|-++++. ++|+||++++++-.... .
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhc-cCceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 3445567799999999999988 46999999997543 4678888888876 48999999999887655 8
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCceEEcCCCcEEEe
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDC------TLSIIHRDISSNNILLDSNLEASVA 597 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~dlkp~NIll~~~~~~kl~ 597 (740)
++||++|.+.|+|.++|..+ .++|....+|+..+++||+|||+.. +++|+|||||++|||+..|+...|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 99999999999999999876 5899999999999999999999863 5689999999999999999999999
Q ss_pred ecccceecccCCCcc--cccccCCCcccccccccccc------CCcchhHhHHHHHHHHHhCCCCCCc--ccc----c--
Q 004642 598 DFGTARLLHVDSSYR--TLRAGTYGYIAPELAYTIVV------TGKCDVYSFGVVALEVLMGTHPGGL--LSS----L-- 661 (740)
Q Consensus 598 DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~------~~~~DvwslGvil~elltg~~p~~~--~~~----~-- 661 (740)
|||+|..+....... ...+||.+|||||++.+..- -.+.||||+|.|+|||+++...+.. ... +
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 999999887543322 23589999999999876431 1268999999999999998755421 111 1
Q ss_pred --ccCCCCCchhhhhhcccCCCcchhhhHHH--HHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCCh
Q 004642 662 --SSSSGPKIMLIDVLNQRLSPPVNQKIVQD--IILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQ 727 (740)
Q Consensus 662 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 727 (740)
...+.-+.+..-++.++.+|..+..+... ...+.+.+..||..||+.|-|+.-+.+++.......+
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 11222344455566666666655544433 3448899999999999999999999999877654443
No 43
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=321.12 Aligned_cols=265 Identities=26% Similarity=0.402 Sum_probs=212.5
Q ss_pred HHhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc--CCCccceeeeeeeecC--
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV--RHRNIVKLYGFCLHKK-- 522 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~-- 522 (740)
....+..+.+.||+|.||+||+|+| .|..||||++..... +.+.+|.++++.+ +|+||+.+++.-..+.
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE------~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE------RSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhhheeEEEEEecCccccceeeccc-cCCceEEEEecccch------hhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 4567888899999999999999999 588999999976442 5677899999875 9999999998765433
Q ss_pred --eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCceEEcCCCcEE
Q 004642 523 --CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHD-----CTLSIIHRDISSNNILLDSNLEAS 595 (740)
Q Consensus 523 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~k 595 (740)
+++||.+|.+.|+|+|+|.+. .++....++++..+|.||++||-+ ..|.|.|||||+.|||+..++...
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 589999999999999999875 589999999999999999999976 367899999999999999999999
Q ss_pred EeecccceecccCCC----cccccccCCCccccccccccc------cCCcchhHhHHHHHHHHHhCC----------CCC
Q 004642 596 VADFGTARLLHVDSS----YRTLRAGTYGYIAPELAYTIV------VTGKCDVYSFGVVALEVLMGT----------HPG 655 (740)
Q Consensus 596 l~DfG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslGvil~elltg~----------~p~ 655 (740)
|+|+|+|.....+.. ..+.++||.+|||||++...- .-..+||||||.|+||+..+. .||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 999999987765432 245678999999999987532 123589999999999999753 344
Q ss_pred CcccccccCCCCCchhhhhhcccCCCcchhhhH--HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 656 GLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV--QDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.... +.++..+.+..-+..++++|..+..+. +....+.++|+.||..+|..|-|+-.+.+.|.+...
T Consensus 437 yd~V--p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 437 YDVV--PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCC--CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 3221 223334445555556666665554443 445558899999999999999999999999987653
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-39 Score=302.99 Aligned_cols=256 Identities=29% Similarity=0.424 Sum_probs=216.1
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|.||.||.|+. +++-.||+|++.+.........+++.+|+++...++||||+++|+++.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46899999999999999999954 46788999999877666555668999999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+||.++|+++..+...... +++......+..|+|.|+.|+|.+ +|+||||||+|+|++.++..||+|||-+..-.
T Consensus 101 lEya~~gel~k~L~~~~~~-~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMK-RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhcccc-cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999999999854432 578888899999999999999998 99999999999999999999999999986543
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.......+||.-|.|||...+..++..+|+|++|++.||++.|..||.... .++...++..-.+..+ ...
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-------~~etYkrI~k~~~~~p--~~i 245 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-------HSETYKRIRKVDLKFP--STI 245 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-------hHHHHHHHHHccccCC--ccc
Confidence 444556699999999999999999999999999999999999999997532 2233333333333222 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
... ..++|.+|+..+|.+|.+..|++++..-.
T Consensus 246 s~~---a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 246 SGG---AADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred Chh---HHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 222 78999999999999999999999987643
No 45
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-38 Score=344.54 Aligned_cols=262 Identities=27% Similarity=0.410 Sum_probs=205.6
Q ss_pred HHHhcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeee
Q 004642 446 INATEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFC 518 (740)
Q Consensus 446 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 518 (740)
....++|++.+.||+|+||.||+|... ++..||+|++......+ ....+.+|+++++.+ +|+||+++++++
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD--EREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHH--HHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 344568999999999999999998532 34579999997654332 246788999999999 899999999999
Q ss_pred eecCeEEEEEEeccCCCchhhhcCCCc-----------------------------------------------------
Q 004642 519 LHKKCMFLIYEYMERGSLFCVLHDDDE----------------------------------------------------- 545 (740)
Q Consensus 519 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 545 (740)
...+..++||||+++|+|.++++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 999999999999999999988854210
Q ss_pred --------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc
Q 004642 546 --------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY 611 (740)
Q Consensus 546 --------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 611 (740)
...+++.++.+++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 12478899999999999999999998 9999999999999999999999999999865433221
Q ss_pred --ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 612 --RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 612 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||..... .....................
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 341 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV-------NSKFYKMVKRGYQMSRPDFAP 341 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc-------cHHHHHHHHcccCccCCCCCC
Confidence 112235678999999998899999999999999999997 9999864321 111222222222211111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..+.+++.+||+.||++||++.++++.|...
T Consensus 342 ---~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 342 ---PEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred ---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2378999999999999999999999998763
No 46
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=303.06 Aligned_cols=261 Identities=23% Similarity=0.337 Sum_probs=207.0
Q ss_pred hcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec-----C
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK-----K 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 522 (740)
.++|++.+.+|+|||+-||.++ ..+++.||+|++...... ..+..++|++..++++|||++++++++..+ .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~---~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQE---DIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchH---HHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4689999999999999999995 567899999999877633 247788999999999999999999988643 3
Q ss_pred eEEEEEEeccCCCchhhhcCCCc-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDE-AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
..|++++|...|+|.+.+..... ...+++.+.+.|+.+|++||++||+. .++++||||||.||++++++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 58999999999999999876543 33689999999999999999999998 33599999999999999999999999999
Q ss_pred ceecccCCCc---------ccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCc
Q 004642 602 ARLLHVDSSY---------RTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKI 669 (740)
Q Consensus 602 a~~~~~~~~~---------~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~ 669 (740)
++...-.-.. ......|..|+|||.+. +...++++|||||||++|+|+.|..||+...+ .+. .
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----~Gg-S 250 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----QGG-S 250 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----cCC-e
Confidence 9765321111 11224689999999886 45678899999999999999999999986433 111 1
Q ss_pred hhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 670 MLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 670 ~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
....+....+..+......+ .+.+++++|++.||.+||++.+++.++..
T Consensus 251 laLAv~n~q~s~P~~~~yse---~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 251 LALAVQNAQISIPNSSRYSE---ALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred EEEeeeccccccCCCCCccH---HHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 11122222222222222233 38899999999999999999999998864
No 47
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=364.22 Aligned_cols=256 Identities=31% Similarity=0.500 Sum_probs=207.7
Q ss_pred cccccceeeecccceEEEEEEeC--CCc----EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP--EGK----VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
+..+..+.||+|.||.||+|... +|. .||+|.++..... +...+|.+|..+|+.++|||||+++|+|.+.+.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~--~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE--QEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCH--HHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 44556778999999999999654 343 4889988765443 446899999999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCC----ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 524 MFLIYEYMERGSLFCVLHDDD----EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
.++++|||++|+|..+|++.. +...++..+.+.++.|||+|+.||+++ ++|||||..+|+|+++...|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 999999999999999998752 234689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCccc-cc-ccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhh-
Q 004642 600 GTARLLHVDSSYRT-LR-AGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVL- 675 (740)
Q Consensus 600 G~a~~~~~~~~~~~-~~-~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~- 675 (740)
|+|+.+.....+.. .. .-+..|||||.+..+.++.|+|||||||++||++| |..||...+. ...+..++
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-------~~v~~~~~~ 919 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-------FEVLLDVLE 919 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-------HHHHHHHHh
Confidence 99995543333321 11 22469999999999999999999999999999999 8889875432 12222222
Q ss_pred cccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 676 NQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 676 ~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..++.++.. +...+.++|..||+.+|++||++..+++.+...
T Consensus 920 ggRL~~P~~-----CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 920 GGRLDPPSY-----CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred CCccCCCCC-----CChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 223443332 223378999999999999999999999987653
No 48
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.8e-39 Score=338.59 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=200.3
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
+.||+|+||.||++.. .+|+.||+|++.............+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999965 468999999997654333344567788999999999999999999999999999999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccc
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTL 614 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 614 (740)
+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 9998886543 578999999999999999999998 9999999999999999999999999998764333333334
Q ss_pred cccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHH
Q 004642 615 RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILV 694 (740)
Q Consensus 615 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 694 (740)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. ... ..+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-------~~~~~~~~~~~~~~p~--~~~---~~~ 222 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILMEEIRFPR--TLS---PEA 222 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCCCCCC--CCC---HHH
Confidence 5799999999999988999999999999999999999999864221 1111222222211111 111 237
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 695 STIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 695 ~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
.+++.+||+.||++|| ++.+++++-..
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~ 254 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 254 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHcCCCc
Confidence 8999999999999998 89999887543
No 49
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.7e-39 Score=342.95 Aligned_cols=257 Identities=23% Similarity=0.303 Sum_probs=206.3
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|++++.+++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999765 58999999997654333334567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997543 578899999999999999999998 999999999999999999999999999976532
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhc--ccCC-Ccchh
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLN--QRLS-PPVNQ 685 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~l~-~~~~~ 685 (740)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. ..+. +....
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~ 224 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN-------ETWENLKYWKETLQRPVYDD 224 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH-------HHHHHHHhccccccCCCCCc
Confidence 223457999999999999989999999999999999999999998643210 00111110 0000 00000
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
........+.+++.+|+..+|++||+++|++++....
T Consensus 225 ~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 225 PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 0001123378899999999999999999999886544
No 50
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=338.50 Aligned_cols=254 Identities=25% Similarity=0.377 Sum_probs=213.3
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (740)
.++|.+.++||+|.||+|+++..+ +++.||||++++...-..+.++..+.|.+++... +||.++.++++|.+++++|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 468999999999999999999655 5789999999988776666678889999998887 59999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||+.||++..+.+.. .+++..+.-++..|+.||+|||++ +||+||||-+|||+|.+|.+||+|||+++..-
T Consensus 447 vmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999966555543 589999999999999999999999 99999999999999999999999999998754
Q ss_pred cCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
......+..+||+.|||||++.+..|+..+|.|||||++|||+.|..||.... .++....++......+..
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd-------Eee~FdsI~~d~~~yP~~-- 590 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD-------EEEVFDSIVNDEVRYPRF-- 590 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHHhcCCCCCCCc--
Confidence 33445566799999999999999999999999999999999999999987532 234445555444443322
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPT-----MQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~L~~ 721 (740)
... +...|+.+++.++|++|-. +.+|.++-..
T Consensus 591 ls~---ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFF 627 (694)
T KOG0694|consen 591 LSK---EAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFF 627 (694)
T ss_pred ccH---HHHHHHHHHhccCcccccCCCCCCchhhhhCCcc
Confidence 222 2678999999999999964 5666666543
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.9e-39 Score=337.45 Aligned_cols=246 Identities=26% Similarity=0.330 Sum_probs=198.6
Q ss_pred eecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||+|+||.||+|... +++.||+|++.............+.+|++++.+++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999654 5889999998754333333456788999999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccc
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRA 616 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 616 (740)
.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99987643 588999999999999999999998 999999999999999999999999999986443333334457
Q ss_pred cCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHH
Q 004642 617 GTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVST 696 (740)
Q Consensus 617 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 696 (740)
||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..............+ ... ...+.+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-------~~~~~~~~~~~~~~~--~~~---~~~~~~ 222 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-------NEMYRKILQEPLRFP--DGF---DRDAKD 222 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-------HHHHHHHHcCCCCCC--CcC---CHHHHH
Confidence 99999999999999999999999999999999999999864221 111222222222111 111 123789
Q ss_pred HHHHcccCCCCCCC---CHHHHHHHHHc
Q 004642 697 IAFACLSSQPKSRP---TMQRISQELLA 721 (740)
Q Consensus 697 li~~cl~~dP~~RP---s~~ev~~~L~~ 721 (740)
++.+||+.||++|| ++.|++++...
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l~hp~~ 250 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIKNHPFF 250 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHHcCCCc
Confidence 99999999999997 57788776443
No 52
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.3e-38 Score=338.23 Aligned_cols=248 Identities=23% Similarity=0.288 Sum_probs=200.3
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
+.||+|+||.||++.. .+|+.||+|++.............+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999964 468999999997654433444567889999999999999999999999999999999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccc
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTL 614 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 614 (740)
+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 9998886543 588999999999999999999998 9999999999999999999999999998764333333344
Q ss_pred cccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHH
Q 004642 615 RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILV 694 (740)
Q Consensus 615 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 694 (740)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+....... +... ...+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-------~~~~~~~~~~~~~~--p~~~---~~~~ 222 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEDIKF--PRTL---SADA 222 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-------HHHHHHhccCCccC--CCCC---CHHH
Confidence 5799999999999988899999999999999999999999864221 11111111111111 1111 1237
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 695 STIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 695 ~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
.+++.+||+.||++|| ++.|++++...
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 254 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFF 254 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCc
Confidence 7899999999999997 89999987543
No 53
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-39 Score=324.81 Aligned_cols=260 Identities=25% Similarity=0.344 Sum_probs=204.9
Q ss_pred HhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccch-----------HHHHHHHHHHHHHhccCCCccceee
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDS-----------AFVKSFQNEAHVLSTVRHRNIVKLY 515 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l~ 515 (740)
..++|++.+.||+|.||.|-+|+ ..+++.||+|++.+...... ...+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 35789999999999999999995 44789999999976432211 1134788999999999999999999
Q ss_pred eeeeec--CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 004642 516 GFCLHK--KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE 593 (740)
Q Consensus 516 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 593 (740)
++..++ +..|||+|||..|.+...- .....++..++++++.++..||+|||.+ ||+||||||+|+|++++|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCc
Confidence 998875 5689999999998874222 2222389999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecccC-----CCcccccccCCCccccccccccc----cCCcchhHhHHHHHHHHHhCCCCCCcccccccC
Q 004642 594 ASVADFGTARLLHVD-----SSYRTLRAGTYGYIAPELAYTIV----VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS 664 (740)
Q Consensus 594 ~kl~DfG~a~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltg~~p~~~~~~~~~~ 664 (740)
+||+|||.+...... .......+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-....+
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~--- 325 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL--- 325 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH---
Confidence 999999999866221 11223358999999999987632 345789999999999999999998753321
Q ss_pred CCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 665 SGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 665 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.....++...+..+... +....+.++|+++|.+||+.|.+..+|..|.+-..
T Consensus 326 ----~l~~KIvn~pL~fP~~p---e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 326 ----ELFDKIVNDPLEFPENP---EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred ----HHHHHHhcCcccCCCcc---cccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 22334444444443332 23344889999999999999999999999987543
No 54
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=339.64 Aligned_cols=253 Identities=23% Similarity=0.346 Sum_probs=205.7
Q ss_pred hcccccceeeecccceEEEEEEeCC--CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE--GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
.++|++.+.||+|+||.||+|.... +..||+|++...........+.+.+|+++++.++||||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3579999999999999999996443 36899999865443333345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999997654 578899999999999999999998 99999999999999999999999999998754
Q ss_pred cCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. .
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~~p~--~ 250 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-------LLIYQKILEGIIYFPK--F 250 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-------HHHHHHHhcCCCCCCC--C
Confidence 22 2234799999999999988899999999999999999999999864322 1112222222221111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHcC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRP-----TMQRISQELLAG 722 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~~ 722 (740)
..+ .+.+++.+|++.||++|+ +++|++++....
T Consensus 251 ~~~---~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~ 288 (340)
T PTZ00426 251 LDN---NCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFG 288 (340)
T ss_pred CCH---HHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcC
Confidence 112 267899999999999995 899999886544
No 55
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.2e-38 Score=330.60 Aligned_cols=261 Identities=21% Similarity=0.275 Sum_probs=198.1
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +++.||+|++....... ....+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC--cchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 57999999999999999999554 68999999987543222 1246778999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++ +|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 83 EYLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eCCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 99985 88888765432 478899999999999999999998 9999999999999999999999999999765433
Q ss_pred CCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCc---------h
Q 004642 609 SSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKI---------M 670 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~---------~ 670 (740)
........|++.|+|||++.+ ..++.++||||+||++|||++|+.||........ ...... .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 333344568999999998865 5688899999999999999999999864321000 000000 0
Q ss_pred hhhhhcccCCC-cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 671 LIDVLNQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 671 ~~~~~~~~l~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
......+.... +.............+++.+|++.||.+|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 0000000111236799999999999999999999876
No 56
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2e-38 Score=337.07 Aligned_cols=255 Identities=23% Similarity=0.355 Sum_probs=201.7
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||++... +++.||+|+++..........+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999654 6889999999865544444456788999999988 799999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 99988886543 589999999999999999999998 999999999999999999999999999875332233334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCC--CCchhhhhhcccCCCcchhhhHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSG--PKIMLIDVLNQRLSPPVNQKIVQDI 691 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~ 691 (740)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+.......... .+.....+.......+. .. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~---~ 229 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR--SL---S 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCC--CC---C
Confidence 45799999999999999999999999999999999999999975332111111 11111222222222111 11 1
Q ss_pred HHHHHHHHHcccCCCCCCCC------HHHHHHHHHc
Q 004642 692 ILVSTIAFACLSSQPKSRPT------MQRISQELLA 721 (740)
Q Consensus 692 ~~l~~li~~cl~~dP~~RPs------~~ev~~~L~~ 721 (740)
..+.+++.+|++.||++||+ ++|++++-..
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~ 265 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCC
Confidence 23788999999999999987 7888877544
No 57
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.9e-38 Score=324.10 Aligned_cols=254 Identities=23% Similarity=0.377 Sum_probs=202.2
Q ss_pred cccccceeeecccceEEEEEEeC----CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP----EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|.++ .+..||+|.++..... ...+.+.+|++++.+++||||+++++++..++..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD--KQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 56889999999999999999653 3578999999865432 23467889999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +++||||||+||+++.++.++++|||.+...
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999999987643 2588999999999999999999998 9999999999999999999999999987654
Q ss_pred ccCCCcc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcc
Q 004642 606 HVDSSYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPV 683 (740)
Q Consensus 606 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 683 (740)
....... ....++..|+|||++.+..++.++|||||||++||+++ |+.||...... ...+.+......+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~~~~ 229 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDGFRLPA 229 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCCCCC
Confidence 3221111 12235678999999999999999999999999999775 99998653221 11111111111111
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
... ....+.+++.+||+.+|++||+++|+.+.|..
T Consensus 230 ~~~---~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 230 PRN---CPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred CCC---CCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 111 12237889999999999999999999998864
No 58
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.6e-38 Score=334.16 Aligned_cols=266 Identities=24% Similarity=0.325 Sum_probs=207.2
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||.||++... +|..||+|.+..... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 468999999999999999999654 688899999876432 23456789999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++.... .+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred eecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999987643 578899999999999999999975 1699999999999999999999999999976532
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc----------CCC-----------
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS----------SSG----------- 666 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~----------~~~----------- 666 (740)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 157 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 157 --SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred --cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence 222344689999999999998999999999999999999999999864221000 000
Q ss_pred --------------CCch---hhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 667 --------------PKIM---LIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 667 --------------~~~~---~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
.... ..+.+.....+.... ......+.+++.+||+.||++|||+.|++++.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN--GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCCC--ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0000 000010000110000 01123488999999999999999999999998765443
No 59
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.6e-38 Score=336.13 Aligned_cols=254 Identities=24% Similarity=0.352 Sum_probs=199.6
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||++... +++.||+|++......+....+.+.+|..++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999654 6789999999875544444456788899888877 899999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|..++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 99988886543 588999999999999999999998 999999999999999999999999999976433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCC-CCchhh-hhhcccCCCcchhhhHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSG-PKIMLI-DVLNQRLSPPVNQKIVQDI 691 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~ 691 (740)
...||..|+|||++.+..++.++|||||||++|||++|+.||........... ...... .+.......+. ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-----~~~ 229 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-----SLS 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC-----CCC
Confidence 45799999999999999999999999999999999999999864322111111 111111 12222222111 112
Q ss_pred HHHHHHHHHcccCCCCCCCC------HHHHHHHHH
Q 004642 692 ILVSTIAFACLSSQPKSRPT------MQRISQELL 720 (740)
Q Consensus 692 ~~l~~li~~cl~~dP~~RPs------~~ev~~~L~ 720 (740)
..+.+++.+||+.||++||+ +++++++-.
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 264 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCC
Confidence 23779999999999999998 578877743
No 60
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-38 Score=315.76 Aligned_cols=259 Identities=24% Similarity=0.303 Sum_probs=221.4
Q ss_pred cccccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+.|+..+.||+|.-|+||+++.++ +..+|+|++.+..........+...|.+|++.++||.++.+|+.++.++..++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 467778899999999999997764 5899999998877666666778899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc-
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV- 607 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~- 607 (740)
|||+||+|..+++++... .+++..+..++.+|+-||+|||-. |||.|||||+|||+.++|++.|+||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~~-~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGK-RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCCC-ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999999886654 689999999999999999999988 999999999999999999999999998643211
Q ss_pred --------------------------------C-C----------------------CcccccccCCCcccccccccccc
Q 004642 608 --------------------------------D-S----------------------SYRTLRAGTYGYIAPELAYTIVV 632 (740)
Q Consensus 608 --------------------------------~-~----------------------~~~~~~~gt~~y~aPE~~~~~~~ 632 (740)
. . ......+||-+|+|||++.+..+
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 00122469999999999999999
Q ss_pred CCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCC-
Q 004642 633 TGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT- 711 (740)
Q Consensus 633 ~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs- 711 (740)
+.++|.|+|||++|||+.|+.||.. ...+..+.+++.+.+..+... .....+.++|++.|.+||.+|-.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG-------~~~~~Tl~NIv~~~l~Fp~~~---~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKG-------SNNKETLRNIVGQPLKFPEEP---EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCC-------CCchhhHHHHhcCCCcCCCCC---cchhHHHHHHHHHhccChhhhhcc
Confidence 9999999999999999999999875 445677888888877655443 23334889999999999999987
Q ss_pred ---HHHHHHHHHcC
Q 004642 712 ---MQRISQELLAG 722 (740)
Q Consensus 712 ---~~ev~~~L~~~ 722 (740)
|+||.+|-...
T Consensus 383 ~rGA~eIK~HpFF~ 396 (459)
T KOG0610|consen 383 KRGAAEIKRHPFFE 396 (459)
T ss_pred ccchHHhhcCcccc
Confidence 99999887654
No 61
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.4e-38 Score=338.05 Aligned_cols=255 Identities=25% Similarity=0.383 Sum_probs=197.6
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|+..+.||+|+||.||+|.. .+|+.||+|++..... ....+.+.+|+++++.++|+||+++++++...+..++||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE--DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc--HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 3466678899999999999965 4689999999865432 234567899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 152 e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 152 EFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred ecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999986432 345677888999999999999998 9999999999999999999999999999876533
Q ss_pred CCcccccccCCCccccccccc-----cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcc
Q 004642 609 SSYRTLRAGTYGYIAPELAYT-----IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPV 683 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 683 (740)
........||..|+|||++.. ...+.++|||||||++|||++|+.||..... ..................
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~ 296 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-----GDWASLMCAICMSQPPEA 296 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhccCCCCC
Confidence 333344579999999998743 2344689999999999999999999873211 000111111111111111
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.. .....+.+++.+||+.||++||++.|++++-...+.
T Consensus 297 ~~---~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 297 PA---TASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred CC---ccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 11 112238899999999999999999999999766654
No 62
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.9e-38 Score=334.39 Aligned_cols=250 Identities=24% Similarity=0.358 Sum_probs=198.0
Q ss_pred cccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHH---hccCCCccceeeeeeeecCeEEEE
Q 004642 452 FHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVL---STVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
|++.+.||+|+||.||+|.. .+|+.||+|+++..........+.+.+|++++ +.++||||+++++++..++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 67789999999999999965 46899999999754332223345566666554 567899999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|...++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999998887643 589999999999999999999998 999999999999999999999999999875433
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.........|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. ..
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-------~~~~~~i~~~~~~~p~--~~ 224 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-------EEVFDSIVNDEVRYPR--FL 224 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCC--CC
Confidence 33333445799999999999998999999999999999999999999864321 1112222222221111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRP-----TMQRISQELL 720 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~ 720 (740)
. ..+.+++.+||+.||++|| ++.+++++..
T Consensus 225 ~---~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~ 259 (324)
T cd05589 225 S---REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPF 259 (324)
T ss_pred C---HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCC
Confidence 1 2377899999999999999 6788877653
No 63
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=9.6e-38 Score=322.16 Aligned_cols=262 Identities=21% Similarity=0.273 Sum_probs=210.0
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|.. .+++.||+|.+......+......+.+|+++++.++||||+++++++.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5789999999999999999965 478999999887644444455577889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 529 EYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
||+++++|.+++.... ....+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998885432 223578899999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.........|+..|+|||.+.+..++.++||||+|+++|||++|+.||..... ........+.....++...
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~-- 230 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLFSLCQKIEQCDYPPLPT-- 230 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc------cHHHHHHHHhcCCCCCCCh--
Confidence 33333344688899999999888889999999999999999999999753211 1111222222211111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
......+.+++.+||+.+|++||++.++++.+...
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11223488999999999999999999999998764
No 64
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-38 Score=343.01 Aligned_cols=256 Identities=26% Similarity=0.381 Sum_probs=207.8
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|.+.+.||+|+||.||+|... +|+.||+|++...........+.+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999654 68999999997654333334567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 9999999999997652 588999999999999999999998 9999999999999999999999999999876433
Q ss_pred C-----------------------------CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccc
Q 004642 609 S-----------------------------SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLS 659 (740)
Q Consensus 609 ~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 659 (740)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 12233468999999999999999999999999999999999999987532
Q ss_pred ccccCCCCCchhhhhhc--ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHcC
Q 004642 660 SLSSSSGPKIMLIDVLN--QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT-MQRISQELLAG 722 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ev~~~L~~~ 722 (740)
. ......+.. .....+..... ...+.+++.+|+. ||++||+ ++|++++....
T Consensus 235 ~-------~~~~~~i~~~~~~~~~p~~~~~---~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~ 289 (350)
T cd05573 235 L-------QETYNKIINWKESLRFPPDPPV---SPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK 289 (350)
T ss_pred H-------HHHHHHHhccCCcccCCCCCCC---CHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence 1 111112222 11111111111 2237789999997 9999999 99999986554
No 65
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.9e-38 Score=329.49 Aligned_cols=269 Identities=24% Similarity=0.327 Sum_probs=202.5
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||.||+|... +++.||+|++........ ...+.+|+++++.++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT--PFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccccc--chhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 468999999999999999999664 689999999975443221 24567899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||++ ++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 82 FEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 99996 57777775433 2478889999999999999999999 999999999999999999999999999976543
Q ss_pred CCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc----------CCCCCch--hhh-
Q 004642 608 DSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS----------SSGPKIM--LID- 673 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~----------~~~~~~~--~~~- 673 (740)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ......+ ...
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 3333344578999999998865 4578899999999999999999999975422100 0000000 000
Q ss_pred -hhcc-cC---CCcchhhhH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 674 -VLNQ-RL---SPPVNQKIV---QDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 674 -~~~~-~l---~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
...+ .. .+....... .....+.+++.+|++.||++|||++|+++|-.....+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 0000 00 000000000 0112367899999999999999999999988776543
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-37 Score=319.67 Aligned_cols=250 Identities=25% Similarity=0.416 Sum_probs=201.6
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
++|++.+.||+|+||.||++.++++..+|+|.+...... .+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 468888999999999999999888889999998754332 2568889999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++|+|.++++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 80 FMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 9999999999875432 588999999999999999999998 99999999999999999999999999998654322
Q ss_pred Ccc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 610 SYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 610 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
... ....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.... ....+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-------~~~~~~i~~~~-~~~~~~-- 224 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-------YEVVEMISRGF-RLYRPK-- 224 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHCCC-CCCCCC--
Confidence 211 12235668999999988889999999999999999999 8999864321 11111111111 111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.....+.+++.+||+.+|++||+++|+++.|
T Consensus 225 -~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 -LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1122478999999999999999999999876
No 67
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4e-38 Score=328.13 Aligned_cols=261 Identities=22% Similarity=0.264 Sum_probs=206.5
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|++.+.||+|+||+||++.. .+++.||+|++.............+.+|++++++++||||+++++.+.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 478889999999999999965 4689999999976544333334567789999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 9999999988865332 3589999999999999999999998 99999999999999999999999999998764322
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...... .........+.... ..... .
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~-~~~~~---~ 227 (285)
T cd05605 157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK----VKREEVERRVKEDQ-EEYSE---K 227 (285)
T ss_pred -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh----hHHHHHHHHhhhcc-cccCc---c
Confidence 223347899999999999888999999999999999999999998642210 00011111111111 11111 1
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHcCCC
Q 004642 690 DIILVSTIAFACLSSQPKSRP-----TMQRISQELLAGKT 724 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~~~~ 724 (740)
....+.+++.+||+.||++|| ++++++++-...+.
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 122378999999999999999 89999888666543
No 68
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.1e-38 Score=336.61 Aligned_cols=248 Identities=23% Similarity=0.294 Sum_probs=199.6
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
+.||+|+||.||++.. .+|+.||+|++.............+..|++++..++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999954 578999999997654333334567788999999999999999999999999999999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
+|..++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 9998886543 58899999999999999999997 6 999999999999999999999999999976433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... +.....+.......+ ... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-------~~~~~~i~~~~~~~p--~~~---~~~ 222 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEIRFP--RTL---SPE 222 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-------HHHHHHHhcCCCCCC--CCC---CHH
Confidence 45799999999999988999999999999999999999999864221 111111111111111 111 123
Q ss_pred HHHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 694 VSTIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 694 l~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
+.+++.+||+.||++|+ ++++++++...
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 255 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFF 255 (325)
T ss_pred HHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCc
Confidence 78899999999999996 99999987543
No 69
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.6e-38 Score=324.60 Aligned_cols=249 Identities=38% Similarity=0.589 Sum_probs=192.3
Q ss_pred cceeeecccceEEEEEEeC-----CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 454 IKYCIGTGGYGSVYKAELP-----EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+.+.||.|.||.||+|.+. .+..|+||.++..... ...+.+.+|++.+++++||||++++|++...+..++|+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE--EEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH--HHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc--ccceeeeecccccccccccccccccccccccccccccc
Confidence 4678999999999999776 3678999999653332 23578999999999999999999999999888899999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.++++... ...+++.++..|+.||+.||+|||+. +++|+||+++||++++++.+||+|||++......
T Consensus 81 e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp E--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 9999999999998762 23689999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 609 SSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 609 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
... .....+...|+|||.+.+..++.++||||||+++|||++ |+.||..... ..+.+.+.+....+...
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 228 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--------EEIIEKLKQGQRLPIPD 228 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--------HHHHHHHHTTEETTSBT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccceecc
Confidence 221 222346789999999999889999999999999999999 6788654221 11222222222221121
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.... .+.+++.+||+.+|++||+++++++.|
T Consensus 229 ~~~~---~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 NCPK---DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBH---HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred chhH---HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1222 378999999999999999999999886
No 70
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=5e-38 Score=333.35 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=199.3
Q ss_pred eeeecccceEEEEEEe----CCCcEEEEEEccCCccc-chHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 456 YCIGTGGYGSVYKAEL----PEGKVVALKKLHHSETE-DSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
+.||+|+||.||+++. .+++.||+|++...... .......+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999964 35789999998754321 122245678899999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+++++|.+++.... .+.+..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999887543 467888889999999999999998 999999999999999999999999999976443333
Q ss_pred cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHH
Q 004642 611 YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQD 690 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 690 (740)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. ..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-------~~~~~~~~~~~~~~~~--~~--- 223 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-------KKTIDKILKGKLNLPP--YL--- 223 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCCCC--CC---
Confidence 33445799999999999988899999999999999999999999864321 1122222222222111 11
Q ss_pred HHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 691 IILVSTIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 691 ~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
...+.+++.+||+.+|++|| ++++++++-..
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~ 259 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF 259 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCc
Confidence 12378999999999999999 89999887543
No 71
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-37 Score=324.50 Aligned_cols=256 Identities=26% Similarity=0.452 Sum_probs=205.1
Q ss_pred cccccceeeecccceEEEEEEeCC------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPE------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
++|++.+.||+|+||.||+|.... +..||+|.+..... ......+.+|++++.+++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE--PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC--HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 478889999999999999996532 25799999875432 2335678999999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCc-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC
Q 004642 524 MFLIYEYMERGSLFCVLHDDDE-------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS 590 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 590 (740)
.+++|||+++++|.+++..... ...+++.++..++.|++.||+|||+. +++|+||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 9999999999999999865321 13578999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecccceecccCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCC
Q 004642 591 NLEASVADFGTARLLHVDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGP 667 (740)
Q Consensus 591 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 667 (740)
++.++|+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~------- 232 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN------- 232 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-------
Confidence 99999999999976533221 1233456789999999988889999999999999999998 9999764221
Q ss_pred CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 668 KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
......+.......... .....+.+++.+||+.||++||+++|++++|..
T Consensus 233 -~~~~~~i~~~~~~~~~~---~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 -QEVIEMIRSRQLLPCPE---DCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHHcCCcCCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 12222222222222211 122348899999999999999999999999874
No 72
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.8e-38 Score=333.08 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=200.0
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCC-ccceeeeeeeecCeEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHR-NIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 528 (740)
+|++.+.||+|+||.||+|... +++.||+|++...........+.+..|.+++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999654 5789999999765433333456778899999999764 6888999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999998886543 578899999999999999999998 9999999999999999999999999998754333
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........||+.|+|||++.+..++.++||||+||++|||+||+.||..... ......+.......+ ....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~~ 225 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNVSYP--KSLS 225 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCC
Confidence 3333445799999999999998999999999999999999999999864321 111222222222111 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH-----HHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTM-----QRISQEL 719 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~~L 719 (740)
..+.+++.+||+.||++|++. +++.++.
T Consensus 226 ---~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp 258 (324)
T cd05587 226 ---KEAVSICKGLLTKHPAKRLGCGPTGERDIREHA 258 (324)
T ss_pred ---HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 237789999999999999976 6776654
No 73
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.6e-38 Score=325.63 Aligned_cols=253 Identities=25% Similarity=0.294 Sum_probs=199.1
Q ss_pred eecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||+|+||+||++.. .+|+.||+|++...........+.+..|++++++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999954 46899999998765443333346778899999999999999999999999999999999999999
Q ss_pred hhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccccc
Q 004642 537 FCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLR 615 (740)
Q Consensus 537 ~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 615 (740)
.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||.+.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 88775432 234689999999999999999999998 99999999999999999999999999998765433333345
Q ss_pred ccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHH
Q 004642 616 AGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVS 695 (740)
Q Consensus 616 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 695 (740)
.||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............... ... .....+.
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~--~~~---~~~~~~~ 229 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV---ENKELKQRILNDSVT--YPD---KFSPASK 229 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch---hHHHHHHhhcccCCC--Ccc---cCCHHHH
Confidence 78999999999999999999999999999999999999986432100 000111111111111 111 1122378
Q ss_pred HHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 696 TIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 696 ~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
+++.+||+.||++|| ++++++++-..
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~ 260 (280)
T cd05608 230 SFCEALLAKDPEKRLGFRDGNCDGLRTHPLF 260 (280)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHhcChhh
Confidence 999999999999999 78888887544
No 74
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.4e-38 Score=333.15 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=197.5
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|..+ +++.||+|++...........+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999654 5889999998754332223346677888888876 699999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99998887543 588999999999999999999998 999999999999999999999999999876433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+ .... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~~--~~~~---~~ 222 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-------DDLFEAILNDEVVYP--TWLS---QD 222 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHhcCCCCCC--CCCC---HH
Confidence 45799999999999988899999999999999999999999875321 111222222211111 1111 23
Q ss_pred HHHHHHHcccCCCCCCCCH------HHHHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTM------QRISQELL 720 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~------~ev~~~L~ 720 (740)
+.+++.+|++.||++||++ ++++++-.
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~ 255 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGSLTLGGEEAILRHPF 255 (320)
T ss_pred HHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence 7889999999999999998 77777654
No 75
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=345.51 Aligned_cols=255 Identities=22% Similarity=0.345 Sum_probs=205.5
Q ss_pred hcccccceeeecccceEEEEEEeCCC-cEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeee-ee-----
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEG-KVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFC-LH----- 520 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~-~~----- 520 (740)
..++++.+.|.+|||+.||.|....+ ..||+|++-.. ++...+...+|+++|++++ |||||.+++.. ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 34677889999999999999976655 99999999765 4556788999999999996 99999999933 21
Q ss_pred -cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 521 -KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 521 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
..+++|.||||.||.|-+++...... .+++.++++|+.|+++|+++||.. .++|||||||-+|||++.++..|||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 24689999999999999999865444 499999999999999999999986 678999999999999999999999999
Q ss_pred ccceecccCCCcc---------cccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCC
Q 004642 600 GTARLLHVDSSYR---------TLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGP 667 (740)
Q Consensus 600 G~a~~~~~~~~~~---------~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~ 667 (740)
|.|.-........ -...-|+.|+|||.+. +..+++|+|||+|||+||-|+..++||+....
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------- 263 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------- 263 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------
Confidence 9987543222110 1134689999999764 67899999999999999999999999985322
Q ss_pred CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 668 KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..++......+....+ ...+.+||..||+.+|++||++.||++++...
T Consensus 264 ----laIlng~Y~~P~~p~y---s~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPFPNY---SDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred ----eeEEeccccCCCCccH---HHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 1233333333332222 33488999999999999999999999998653
No 76
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.5e-38 Score=327.13 Aligned_cols=262 Identities=24% Similarity=0.284 Sum_probs=199.8
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+++.+ +++.||+|++......+ ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-EVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccc-cchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 46899999999999999999765 57899999997653322 23467789999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 80 EYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999998776554332 2578899999999999999999998 9999999999999999999999999999876432
Q ss_pred CC-cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhhhhh-c--
Q 004642 609 SS-YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLIDVL-N-- 676 (740)
Q Consensus 609 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~~~~-~-- 676 (740)
.. ......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ............ +
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 22 22334689999999999988899999999999999999999999875322100 000000000000 0
Q ss_pred ---ccCCCcch-h-----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 677 ---QRLSPPVN-Q-----KIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 677 ---~~l~~~~~-~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+.... . ........+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 0 000112348899999999999999999999876
No 77
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.7e-38 Score=332.83 Aligned_cols=254 Identities=22% Similarity=0.344 Sum_probs=200.5
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|.. .+++.||+|++......+....+.+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 46789999999876554444567788999999888 699999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|..++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 99988886543 589999999999999999999998 999999999999999999999999999975432233334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..........................+. ... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~---~~ 229 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR--FLS---VK 229 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCC--CCC---HH
Confidence 4579999999999999999999999999999999999999996533211111111111222222222111 111 23
Q ss_pred HHHHHHHcccCCCCCCCC------HHHHHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPT------MQRISQELL 720 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs------~~ev~~~L~ 720 (740)
+.+++.+||+.||++|++ ++++.++-.
T Consensus 230 ~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~ 262 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTF 262 (327)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCC
Confidence 678999999999999997 568877653
No 78
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.4e-37 Score=319.83 Aligned_cols=254 Identities=26% Similarity=0.428 Sum_probs=205.3
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|++.++||+|+||.||+|...++..||+|.+...... .+.+.+|+.++++++|+||+++++++..++..+++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchh----HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 4678999999999999999998888889999998654322 467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.++++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.++.....
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 81 EYMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred ecCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999875432 3578899999999999999999998 9999999999999999999999999999876432
Q ss_pred CCc-ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSY-RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
... .....++..|+|||+..+..++.++|||||||++|+|++ |+.||..... ......+......+....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--------SDVMSALQRGYRMPRMEN 228 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC
Confidence 211 122345678999999988889999999999999999998 9999864221 111111211111111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
....+.+++.+|++.+|++||+++++.+.|+.
T Consensus 229 ---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 229 ---CPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---CCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 12237899999999999999999999999864
No 79
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.5e-38 Score=332.57 Aligned_cols=250 Identities=23% Similarity=0.339 Sum_probs=200.4
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+|++.+.||+|+||.||+|... +++.||+|++...........+.+..|..++... +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788999999999999999654 5789999999765433333345667788888777 5899999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+.+.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999998886543 578899999999999999999998 9999999999999999999999999999765433
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. ...
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-------~~~~~~i~~~~~~~p~--~~s 225 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEHNVAYPK--SMS 225 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCC--cCC
Confidence 3334455799999999999999999999999999999999999999864321 1122223322222111 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTM-----QRISQE 718 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~~ 718 (740)
..+.+++.+|++.||++|++. .++.++
T Consensus 226 ---~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 226 ---KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred ---HHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 237889999999999999974 677655
No 80
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.4e-38 Score=332.90 Aligned_cols=248 Identities=25% Similarity=0.356 Sum_probs=199.5
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|... +++.||+|++...........+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 35899999999999654 5789999999765433333456677888888866 899999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|...+.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99998886543 578899999999999999999999 999999999999999999999999999976543333344
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-------~~~~~~i~~~~~~~p~--~~~---~~ 222 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-------DDLFESILHDDVLYPV--WLS---KE 222 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCCCC--CCC---HH
Confidence 45799999999999988999999999999999999999999875321 1122222222221111 011 23
Q ss_pred HHHHHHHcccCCCCCCC-------CHHHHHHHHHc
Q 004642 694 VSTIAFACLSSQPKSRP-------TMQRISQELLA 721 (740)
Q Consensus 694 l~~li~~cl~~dP~~RP-------s~~ev~~~L~~ 721 (740)
+.+++.+|++.||++|| ++++++++...
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~ 257 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFF 257 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence 77899999999999999 88999887643
No 81
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=9.3e-38 Score=336.76 Aligned_cols=256 Identities=25% Similarity=0.370 Sum_probs=198.3
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||+||++.. .+++.||+|++.............+.+|++++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4788999999999999999954 468999999997654333444567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997643 588999999999999999999998 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCC
Q 004642 609 SS-----------------------------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTH 653 (740)
Q Consensus 609 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~ 653 (740)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 00 0123479999999999999899999999999999999999999
Q ss_pred CCCcccccccCCCCCchhhhhhc--ccCCCcchhhhHHHHHHHHHHHHHccc--CCCCCCCCHHHHHHHHHc
Q 004642 654 PGGLLSSLSSSSGPKIMLIDVLN--QRLSPPVNQKIVQDIILVSTIAFACLS--SQPKSRPTMQRISQELLA 721 (740)
Q Consensus 654 p~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~ev~~~L~~ 721 (740)
||..... ......+.. ..+..+......+ .+.+++.+++. .++..||+++|++++-..
T Consensus 235 Pf~~~~~-------~~~~~~i~~~~~~~~~p~~~~~s~---~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f 296 (363)
T cd05628 235 PFCSETP-------QETYKKVMNWKETLIFPPEVPISE---KAKDLILRFCCEWEHRIGAPGVEEIKTNPFF 296 (363)
T ss_pred CCCCCCH-------HHHHHHHHcCcCcccCCCcCCCCH---HHHHHHHHHcCChhhcCCCCCHHHHhCCCCC
Confidence 9864321 111122221 1111111111112 25566666433 333456999999998543
No 82
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.7e-37 Score=336.45 Aligned_cols=260 Identities=23% Similarity=0.379 Sum_probs=204.7
Q ss_pred HhcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeee
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLH 520 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 520 (740)
..++|.+.+.||+|+||.||+|... .+..||||++...... ...+.+.+|+++++++. ||||+++++++.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS--SEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 3578899999999999999999642 2347999999754332 23467899999999996 9999999999999
Q ss_pred cCeEEEEEEeccCCCchhhhcCCCc-------------------------------------------------------
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDDDE------------------------------------------------------- 545 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 545 (740)
.+..++||||+++|+|.++++....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999988864211
Q ss_pred --------------------------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceE
Q 004642 546 --------------------------------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNIL 587 (740)
Q Consensus 546 --------------------------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIl 587 (740)
...+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 12478888999999999999999998 9999999999999
Q ss_pred EcCCCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccC
Q 004642 588 LDSNLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSS 664 (740)
Q Consensus 588 l~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~ 664 (740)
++.++.+||+|||+++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~---- 345 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV---- 345 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch----
Confidence 999999999999999876433221 122356788999999998889999999999999999997 9899764211
Q ss_pred CCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 665 SGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 665 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+......+............ ...+.+++.+||+.||++||++.++.+.|...
T Consensus 346 ---~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 346 ---DSTFYNKIKSGYRMAKPDHA---TQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred ---hHHHHHHHhcCCCCCCCccC---CHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 11112222222211111111 22378999999999999999999999999864
No 83
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=7.7e-38 Score=330.67 Aligned_cols=245 Identities=25% Similarity=0.362 Sum_probs=193.4
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|... +++.||+|+++..........+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999654 5789999999765433333345556677777654 899999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99998887543 578899999999999999999998 999999999999999999999999999986543333344
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... .+.... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~--~~~~~~---~~ 222 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-------DELFDSILNDRPH--FPRWIS---KE 222 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCC--CCCCCC---HH
Confidence 55799999999999988899999999999999999999999864321 1111122111111 111111 23
Q ss_pred HHHHHHHcccCCCCCCCCHH-HHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTMQ-RISQE 718 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~-ev~~~ 718 (740)
+.+++.+||+.||++||++. +++++
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHcC
Confidence 67899999999999999875 66554
No 84
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.3e-38 Score=312.17 Aligned_cols=268 Identities=22% Similarity=0.278 Sum_probs=205.3
Q ss_pred cccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCc-cceeeeeeeecC-----
Q 004642 450 EDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRN-IVKLYGFCLHKK----- 522 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 522 (740)
..|...++||+|.||+||+|+ ..+|+.||+|+++.....+ ..-....+|+.+++.++|+| ||.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~E-G~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE-GVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccccc-CCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 456667789999999999994 4578999999998765532 12345678999999999999 999999998876
Q ss_pred -eEEEEEEeccCCCchhhhcCCCcc-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 523 -CMFLIYEYMERGSLFCVLHDDDEA-IELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 523 -~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
..++|+||++. +|.+++...... ..++...+..++.||+.||+|||++ +|+||||||+|||++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 78999999976 888888765532 2466688999999999999999999 99999999999999999999999999
Q ss_pred cceecccCCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccc---------cCCCCCch
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS---------SSSGPKIM 670 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~---------~~~~~~~~ 670 (740)
+|+.+..+....+..++|..|+|||++.+. .|++..||||+|||++||++++.-|...++.. .-+..+.+
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 999877666656667899999999999876 68999999999999999999998887554310 00000000
Q ss_pred --hhhhhccc------C-CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 671 --LIDVLNQR------L-SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 671 --~~~~~~~~------l-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.. . +...............+++.+|++.+|.+|.|++.+++|-...
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~ 306 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFS 306 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhc
Confidence 00000000 0 0000000111112377899999999999999999999985444
No 85
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.2e-37 Score=325.61 Aligned_cols=262 Identities=24% Similarity=0.343 Sum_probs=194.1
Q ss_pred cccccceeeecccceEEEEEEe-C-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc---CCCccceeeeeeee----
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-P-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV---RHRNIVKLYGFCLH---- 520 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~---- 520 (740)
++|++.+.||+|+||.||+|.. . +|+.||+|++......+. ....+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC-chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 3689999999999999999965 3 468899999875443321 123455677776665 69999999998852
Q ss_pred -cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 521 -KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 521 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
....++||||++ ++|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 456899999997 588888865432 2578999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCCch
Q 004642 600 GTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPKIM 670 (740)
Q Consensus 600 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~~~ 670 (740)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 999876433 223345689999999999888899999999999999999999999875432100 0000000
Q ss_pred h------hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 671 L------IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 671 ~------~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
. ......................+.+++.+|++.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0 00000000000000001112236789999999999999999999875
No 86
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.4e-38 Score=334.40 Aligned_cols=263 Identities=26% Similarity=0.374 Sum_probs=197.6
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec-----CeE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK-----KCM 524 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 524 (740)
+|++.+.||+|+||.||+|.. .+|+.||+|++....... ....++.+|++++++++||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-hhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 588899999999999999964 468999999987543222 2235688999999999999999999988643 247
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++||||++ ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 99999996 58888886543 588999999999999999999999 999999999999999999999999999986
Q ss_pred cccCCC---cccccccCCCccccccccc--cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCch-
Q 004642 605 LHVDSS---YRTLRAGTYGYIAPELAYT--IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIM- 670 (740)
Q Consensus 605 ~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~- 670 (740)
...... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||........ .......
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 532221 1233468999999999865 5788999999999999999999999864321000 0000000
Q ss_pred ----------hhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 671 ----------LIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 671 ----------~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
....+.+................+.+++.+||+.||++||+++|++++-..
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f 293 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence 000111111111111111112336799999999999999999999998754
No 87
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=313.41 Aligned_cols=265 Identities=24% Similarity=0.315 Sum_probs=206.5
Q ss_pred HhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee-----c
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH-----K 521 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~ 521 (740)
....|...+.||+|+||.|+.+ +..+|+.||+|++....... -..++..+|+++++.++|+||+.+.+.+.. -
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~-~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQ-IDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhch-HHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 4556666788999999999999 45578999999998544433 335778899999999999999999998865 3
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
...|+|+|+|+ .+|...++... .++......++.||++||.|+|+. +|+|||+||+|++++.++..||+|||+
T Consensus 99 ~DvYiV~elMe-tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHHh-hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 46899999995 48888887654 478888999999999999999998 999999999999999999999999999
Q ss_pred ceecccC--CCcccccccCCCcccccccc-ccccCCcchhHhHHHHHHHHHhCCCCCCcccccc--------cCCCCCch
Q 004642 602 ARLLHVD--SSYRTLRAGTYGYIAPELAY-TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS--------SSSGPKIM 670 (740)
Q Consensus 602 a~~~~~~--~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~--------~~~~~~~~ 670 (740)
|+..... ....+..+.|..|+|||++. ...|+...||||.|||+.||++|+.-|....... .+...+..
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 9987542 33445567899999999876 4578999999999999999999999887553210 00111111
Q ss_pred --------hhhhh---cccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 671 --------LIDVL---NQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 671 --------~~~~~---~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
....+ .+..+.+.............+++.+||..||.+|+|++|.++|.-
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPY 312 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPY 312 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChh
Confidence 11111 122222222222333445789999999999999999999999874
No 88
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.8e-37 Score=320.19 Aligned_cols=261 Identities=20% Similarity=0.277 Sum_probs=208.9
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++.. .+|+.+|||.+......+....+.+.+|+++++.++||||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999964 578999999887654444444578889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 529 EYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
||+++++|.+++.... ....+++..+..++.||+.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999886422 233689999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.........|+..|+|||++.+..++.++||||||+++|+|++|..||..... ........+.....++....
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~-- 231 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQCDYPPLPSD-- 231 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-----hHHHHhhhhhcCCCCCCCcc--
Confidence 43333345688999999999888899999999999999999999999753211 00011111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.+++.+||+.+|++|||+.+|++.+.+
T Consensus 232 -~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 232 -HYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred -cccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 122348899999999999999999999988765
No 89
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.2e-37 Score=331.72 Aligned_cols=260 Identities=26% Similarity=0.393 Sum_probs=202.9
Q ss_pred HhcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeee
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLH 520 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 520 (740)
..++|++.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|++++.++ +|+||+++++++..
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA--SEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH--HHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 3468999999999999999999432 3578999999754432 2246778899999999 89999999998875
Q ss_pred c-CeEEEEEEeccCCCchhhhcCCCc------------------------------------------------------
Q 004642 521 K-KCMFLIYEYMERGSLFCVLHDDDE------------------------------------------------------ 545 (740)
Q Consensus 521 ~-~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------ 545 (740)
. ...+++|||+++++|.+++.....
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4 568899999999999988854211
Q ss_pred ----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc--ccccccCC
Q 004642 546 ----AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY--RTLRAGTY 619 (740)
Q Consensus 546 ----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~ 619 (740)
...++|..+..++.||+.||+|||+. +|+||||||+||++++++.++|+|||+++.+...... .....++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 12589999999999999999999998 9999999999999999999999999999876433221 12234577
Q ss_pred CccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHH
Q 004642 620 GYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIA 698 (740)
Q Consensus 620 ~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li 698 (740)
.|+|||++.+..++.++|||||||++|||++ |+.||..... .......+.......... .....+.+++
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 309 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-------DEEFCRRLKEGTRMRAPE---YATPEIYSIM 309 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc-------cHHHHHHHhccCCCCCCc---cCCHHHHHHH
Confidence 8999999999999999999999999999998 9999864211 111222222211111111 1123378999
Q ss_pred HHcccCCCCCCCCHHHHHHHHHcC
Q 004642 699 FACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 699 ~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+||+.+|++||++.|++++|...
T Consensus 310 ~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 310 LDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999999999764
No 90
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.2e-37 Score=317.31 Aligned_cols=251 Identities=25% Similarity=0.426 Sum_probs=202.4
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
++|.+.+.||+|+||.||+++..++..+|+|.+...... .+.+.+|+.++++++||||+++++++.+.+..+++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 468889999999999999998877778999998754332 2568899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++|+|.+++..... .+++.+++.++.||+.||+|||+. +++|+||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 80 YMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999999876433 589999999999999999999998 99999999999999999999999999998654332
Q ss_pred Ccc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 610 SYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 610 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
... ....++..|+|||+..+..++.++||||||+++|||++ |+.||..... ....+.+...........
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~- 225 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--------SETVEKVSQGLRLYRPHL- 225 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHhcCCCCCCCCC-
Confidence 211 12235678999999988889999999999999999998 9999764321 111111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
....+.+++.+||+.+|++||++.++++.++
T Consensus 226 --~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 --ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1234889999999999999999999998763
No 91
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1e-37 Score=320.80 Aligned_cols=256 Identities=27% Similarity=0.480 Sum_probs=208.8
Q ss_pred HhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
...+|++.+.||.|+||.||+|...+++.+|+|.+...... ....+.+|+++++.++|+||+++++++.+.+..++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLL---KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchh---hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 45678999999999999999998888999999998765432 245788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++..... ..+++.++..++.||+.|++|||+. +++|+||||+||++++++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 999999999999976543 3589999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.........++..|+|||...+..++.++||||||+++|+|++ |+.||..... ...... +......+...
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~-------~~~~~~-~~~~~~~~~~~- 227 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN-------HEVYDQ-ITAGYRMPCPA- 227 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH-------HHHHHH-HHhCCcCCCCC-
Confidence 3322233346778999999988889999999999999999998 8999864321 111111 21222111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.+++.+||+.||++|||++++++.|..
T Consensus 228 --~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 228 --KCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 122337899999999999999999999999874
No 92
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.3e-37 Score=337.73 Aligned_cols=256 Identities=23% Similarity=0.326 Sum_probs=200.7
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|.+.+.||+|+||+||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578899999999999999954 5689999999976544444445778999999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987644 578888999999999999999998 99999999999999999999999999975431100
Q ss_pred -----------------------------------------------CcccccccCCCccccccccccccCCcchhHhHH
Q 004642 610 -----------------------------------------------SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFG 642 (740)
Q Consensus 610 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 642 (740)
.......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 001124699999999999988899999999999
Q ss_pred HHHHHHHhCCCCCCcccccccCCCCCchhhhhhc--ccCCCcchhhhHHHHHHHHHHHHH--cccCCCCCCCCHHHHHHH
Q 004642 643 VVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLN--QRLSPPVNQKIVQDIILVSTIAFA--CLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 643 vil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~ev~~~ 718 (740)
|++|||++|+.||..... ......+.. ..+..+...... ..+.+++.+ |+..+|..||+++|+++|
T Consensus 236 ~il~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~s---~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 236 VILFEMLVGQPPFLAPTP-------TETQLKVINWENTLHIPPQVKLS---PEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred hHHHHHHhCCCCCcCCCH-------HHHHHHHHccccccCCCCCCCCC---HHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999999999864321 111111211 111111111111 236677777 556677779999999998
Q ss_pred HHcC
Q 004642 719 LLAG 722 (740)
Q Consensus 719 L~~~ 722 (740)
-...
T Consensus 306 p~f~ 309 (381)
T cd05626 306 PFFS 309 (381)
T ss_pred cccC
Confidence 7544
No 93
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-37 Score=322.82 Aligned_cols=252 Identities=23% Similarity=0.275 Sum_probs=195.6
Q ss_pred eecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||+|+||.||+++. .+|+.||+|++...........+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999965 46899999999754333222234566799999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccc
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRA 616 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 616 (740)
.+++..... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRA 155 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccC
Confidence 988865432 2578999999999999999999998 99999999999999999999999999998764322 223346
Q ss_pred cCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHH
Q 004642 617 GTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVST 696 (740)
Q Consensus 617 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 696 (740)
|+..|+|||++.+..++.++||||+||++|||++|+.||...... ................... . .....+.+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~ 228 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK---VAKEELKRRTLEDEVKFEH-Q---NFTEESKD 228 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch---hhHHHHHHHhhcccccccc-c---cCCHHHHH
Confidence 899999999999888999999999999999999999998642210 0011111111111111110 1 11223789
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 697 IAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 697 li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
++.+||+.||++||+++|+++++..
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~~~~ 253 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDDPRK 253 (277)
T ss_pred HHHHHhccCHhhCCCCccchhhhhc
Confidence 9999999999999999776655443
No 94
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-37 Score=334.73 Aligned_cols=259 Identities=23% Similarity=0.286 Sum_probs=198.2
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..+|++.+.||+|+||.||++.. .+++.||+|+... +.+.+|++++++++||||+++++++..+...++|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 35799999999999999999954 5689999996532 3467899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+|++. ++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 162 ~e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 162 LPRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred EecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 99996 58887776543 578999999999999999999998 999999999999999999999999999975432
Q ss_pred CC-CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCC------------------
Q 004642 608 DS-SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPK------------------ 668 (740)
Q Consensus 608 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~------------------ 668 (740)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||-............
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 21 12233479999999999999899999999999999999999998753221110000000
Q ss_pred ----chhhhhh---cccC--CC---cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 669 ----IMLIDVL---NQRL--SP---PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 669 ----~~~~~~~---~~~l--~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
....+.. .+.. .+ +...........+.+++.+||+.||++|||++|++++-....
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 0000000 0000 00 000011112234789999999999999999999999877654
No 95
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.3e-37 Score=317.42 Aligned_cols=253 Identities=28% Similarity=0.420 Sum_probs=203.2
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.+|.+.+.||+|+||.||+|... .++.||+|++..... ..+.+.+|++++++++|+||+++++++...+..+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch----HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 46888899999999999999554 588999999875332 2467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+......
T Consensus 82 e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 82 EFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999999865432 3588999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCcc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.... ....++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+...........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 229 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKGYRMERPEG 229 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCCCCCCCC
Confidence 2211 11234568999999998899999999999999999998 8889754211 111222222222222221
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.. ..+.+++.+||+.+|++||++.|+++.|+.
T Consensus 230 ~~---~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 230 CP---PKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CC---HHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 22 238899999999999999999999999875
No 96
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.4e-37 Score=316.14 Aligned_cols=254 Identities=26% Similarity=0.434 Sum_probs=205.2
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|++.+.||+|+||.||+|...+++.||+|.++..... .+.+.+|++++++++||||+++++++...+..+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD----PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc----HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 4678999999999999999998777889999998764432 356889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 81 ELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 9999999999987643 23589999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCcc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.... .....+..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+......+...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~- 227 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------AEVLQQVDQGYRMPCPP- 227 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCC-
Confidence 2111 11123457999999998889999999999999999999 9999864321 11112222221111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.+++.+|++.+|++||++.++.+.|+.
T Consensus 228 --~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 228 --GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 112348899999999999999999999999874
No 97
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.3e-37 Score=321.67 Aligned_cols=256 Identities=27% Similarity=0.445 Sum_probs=204.6
Q ss_pred hcccccceeeecccceEEEEEEeCC------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
.++|.+.+.||+|+||.||+|...+ ++.||+|.+...... +..+.+.+|+++++.++|+||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN--DARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH--HHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 3568888999999999999996533 478999999765432 23478899999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCC-----------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 004642 523 CMFLIYEYMERGSLFCVLHDDD-----------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN 591 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 591 (740)
..++||||+++++|.+++...+ ....+++.++..++.|++.|++|||++ +++||||||+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCC
Confidence 9999999999999999987542 123578999999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCC
Q 004642 592 LEASVADFGTARLLHVDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPK 668 (740)
Q Consensus 592 ~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~ 668 (740)
+.++|+|||.++....... ......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~-------~ 231 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN-------E 231 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH-------H
Confidence 9999999999976533221 1223345788999999999999999999999999999998 9999754221 1
Q ss_pred chhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 669 IMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 669 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.....+....... ..... ...+.+++.+||+.||++||++.|+++.|.
T Consensus 232 ~~~~~~~~~~~~~-~~~~~---~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 EVIECITQGRLLQ-RPRTC---PSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHcCCcCC-CCCCC---CHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111111111111 11111 223789999999999999999999999885
No 98
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.4e-38 Score=338.65 Aligned_cols=255 Identities=25% Similarity=0.362 Sum_probs=202.8
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +|+.||||++.............+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999654 68999999997644333344567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++|+|||+++.+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999987643 588999999999999999999999 9999999999999999999999999998764321
Q ss_pred CC--------------------------------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh
Q 004642 609 SS--------------------------------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM 650 (740)
Q Consensus 609 ~~--------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt 650 (740)
.. .....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012358999999999999899999999999999999999
Q ss_pred CCCCCCcccccccCCCCCchhhhhhcc--cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHHHHc
Q 004642 651 GTHPGGLLSSLSSSSGPKIMLIDVLNQ--RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT---MQRISQELLA 721 (740)
Q Consensus 651 g~~p~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ev~~~L~~ 721 (740)
|+.||...... .....+... .+..+...... ..+.+++.+|+. +|.+|++ ++|++++-..
T Consensus 235 G~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~s---~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~ 299 (364)
T cd05599 235 GYPPFCSDNPQ-------ETYRKIINWKETLQFPDEVPLS---PEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF 299 (364)
T ss_pred CCCCCCCCCHH-------HHHHHHHcCCCccCCCCCCCCC---HHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence 99998753221 111111111 11111111111 236788999996 9999997 9999887644
No 99
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.1e-37 Score=330.04 Aligned_cols=247 Identities=24% Similarity=0.348 Sum_probs=198.7
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|... +++.||+|++...........+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999654 5789999999765433333356677888888887 799999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|..++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99998887643 589999999999999999999998 999999999999999999999999999976433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+ ... ...
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~---~~~ 222 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-------DELFQSILEDEVRYP--RWL---SKE 222 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-------HHHHHHHHcCCCCCC--CcC---CHH
Confidence 45789999999999999999999999999999999999999864321 111122222222111 111 123
Q ss_pred HHHHHHHcccCCCCCCCCH-----HHHHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTM-----QRISQELL 720 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~-----~ev~~~L~ 720 (740)
+.+++.+||+.||++||++ .+++++-.
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~ 254 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKGHPF 254 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhcCCC
Confidence 7899999999999999999 88887643
No 100
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=300.41 Aligned_cols=257 Identities=25% Similarity=0.340 Sum_probs=211.0
Q ss_pred cccccceeeecccceEEEEEE-eCCCcEEEEEEccCCccc-----chHHHHHHHHHHHHHhcc-CCCccceeeeeeeecC
Q 004642 450 EDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETE-----DSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKK 522 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 522 (740)
+.|.-.+.+|.|..++|-++. .++|.++|+|++...... ..+..+.-.+|+.+++++ .||+|+++.++|+.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 456777889999999999884 457899999998653322 234455667899999998 7999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..++|+|.|+.|.|.+++...- .+++++..+|++|+..|++|||.. .|+||||||+|||++++.++||+|||+|
T Consensus 97 F~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred hhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecccee
Confidence 9999999999999999997643 689999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCcccccccCCCcccccccc------ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhc
Q 004642 603 RLLHVDSSYRTLRAGTYGYIAPELAY------TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLN 676 (740)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
+.+..... .+..+||++|+|||.+. ...|+..+|+|++|||+|.++.|..||..... -.++..++.
T Consensus 171 ~~l~~Gek-LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-------mlMLR~Ime 242 (411)
T KOG0599|consen 171 CQLEPGEK-LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-------MLMLRMIME 242 (411)
T ss_pred eccCCchh-HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-------HHHHHHHHh
Confidence 98875444 34569999999999875 23578899999999999999999999875432 122333333
Q ss_pred ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 677 QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 677 ~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
..... ....|........++|.+|++.||.+|.|++|+++|-..
T Consensus 243 GkyqF-~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 243 GKYQF-RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred ccccc-CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 33322 223355555558899999999999999999999998754
No 101
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.7e-37 Score=316.85 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=204.5
Q ss_pred hcccccceeeecccceEEEEEEeCC----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (740)
.++|++.+.||+|+||.||+|.+.. ...||+|.+..... ......+.+|+.++++++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS--DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 3578899999999999999997642 45799999875443 23346788999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
+++|||+++++|.+++..... .+++.++..++.|++.|++|||+. +|+|+||||+||++++++.++|+|||+++.
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 999999999999999976443 689999999999999999999998 999999999999999999999999999987
Q ss_pred cccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
........ ....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ....+.+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~ 227 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--------QDVIKAVEDGYRL 227 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--------HHHHHHHHcCCCC
Confidence 75222211 12234678999999998889999999999999999998 9999753221 1111222111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+... .....+.+++.+||+.+|++||++.|++++|...
T Consensus 228 ~~~~---~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 PPPM---DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 1123378999999999999999999999999753
No 102
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.8e-37 Score=316.26 Aligned_cols=262 Identities=22% Similarity=0.290 Sum_probs=210.2
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +|+.||+|.++.....+....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999665 78999999987544444444578899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 529 EYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
||+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999886432 234588999999999999999999998 999999999999999999999999999987644
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.........++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ......+.+.....++.+.
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~-- 230 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEKCDYPPLPA-- 230 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc------cHHHHHhhhhcCCCCCCCh--
Confidence 33333345688999999999988899999999999999999999999753210 0001111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
......+.+++.+||..+|++||++.++++.+...
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 01222378999999999999999999999998764
No 103
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-37 Score=328.82 Aligned_cols=265 Identities=23% Similarity=0.319 Sum_probs=205.1
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||.||++... +|..+|+|.+..... ......+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 468999999999999999999665 688899998876432 23346788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. .+++|+||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999987543 478889999999999999999974 1799999999999999999999999999976532
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc----------CCCC----------
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS----------SSGP---------- 667 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~----------~~~~---------- 667 (740)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred h--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 1 22334689999999999988899999999999999999999999864321000 0000
Q ss_pred -------------Cchh---hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 668 -------------KIML---IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 668 -------------~~~~---~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.... .+.+.....+.... .....++.+++.+||+.||++||++.|++++-.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS--GVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCC--CCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000 00000000000000 0012337899999999999999999999998876543
No 104
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=302.47 Aligned_cols=259 Identities=21% Similarity=0.310 Sum_probs=208.9
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
++.|++.+.||+|.|+.||++ ..++|+.+|+|.+........ ..+.+.+|+.+-+.++||||+++.+.+.+.+..|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 467888889999999999998 566899999998876554433 357889999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC---CCcEEEeeccccee
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS---NLEASVADFGTARL 604 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~DfG~a~~ 604 (740)
+|+|+|++|..-+-.. ..+++..+-..++||+.+|+|+|.+ +|||||+||+|+++.. ...+|++|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999986433221 3577788888999999999999999 9999999999999963 34589999999999
Q ss_pred cccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 605 LHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
+. +......++|||+|||||++...+|+..+|||+.||+||-++.|..||...+. ......++......+.
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-------~rlye~I~~g~yd~~~- 233 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYEQIKAGAYDYPS- 233 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-------HHHHHHHhccccCCCC-
Confidence 87 44555567899999999999999999999999999999999999999875321 1222222222222111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
..+..-.+...+++.+|+..||.+|.|+.|.++|-+...
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 123333344789999999999999999999999876553
No 105
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.6e-37 Score=352.13 Aligned_cols=260 Identities=27% Similarity=0.396 Sum_probs=203.2
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +|+.||+|++.......+...+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999654 68999999998655444555678999999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCC--------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 529 EYMERGSLFCVLHDDD--------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
||++||+|.+++.... .....++..++.++.||+.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 123467788899999999999999998 99999999999999999999999999
Q ss_pred cceecccCCC------------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccc
Q 004642 601 TARLLHVDSS------------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS 662 (740)
Q Consensus 601 ~a~~~~~~~~------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~ 662 (740)
+++....... ......||+.|+|||++.+..++.++||||+||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~- 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR- 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-
Confidence 9987621110 011246899999999999999999999999999999999999998642210
Q ss_pred cCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHc
Q 004642 663 SSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP-TMQRISQELLA 721 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~~ 721 (740)
.......+........ .......+.+++.+|++.||++|| +++++.+.|..
T Consensus 238 -----ki~~~~~i~~P~~~~p---~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 238 -----KISYRDVILSPIEVAP---YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred -----hhhhhhhccChhhccc---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000010100000000 011122378899999999999995 66777776654
No 106
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.1e-37 Score=321.42 Aligned_cols=257 Identities=24% Similarity=0.365 Sum_probs=202.2
Q ss_pred HhcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK 521 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (740)
..++|++.+.||+|+||.||+|... ++..||+|++...... ....++.+|+.+++.++||||+++++++.++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4678999999999999999998643 3567999998653322 2246788999999999999999999999999
Q ss_pred CeEEEEEEeccCCCchhhhcCCCc-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcE
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDE-------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEA 594 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 594 (740)
...++||||+++++|.+++..... ...+++..+..++.|++.||+|||+. +++|+||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 999999999999999999865321 23467889999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchh
Q 004642 595 SVADFGTARLLHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIML 671 (740)
Q Consensus 595 kl~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 671 (740)
+|+|||+++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||..... ....
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-------~~~~ 231 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-------EQVL 231 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHH
Confidence 999999987654322211 12245778999999998889999999999999999999 6888754221 1111
Q ss_pred hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 672 IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 672 ~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.......... ... .....+.+++.+||+.+|++||++.|++++|+
T Consensus 232 ~~~~~~~~~~-~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 232 RFVMEGGLLD-KPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHcCCcCC-CCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1111211111 111 11224889999999999999999999999886
No 107
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=310.77 Aligned_cols=254 Identities=28% Similarity=0.414 Sum_probs=214.8
Q ss_pred cccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+-|.++.+||+|+||+||++. ..+|+.+|+|++..... .+++.+|+.+|++.+.|++|++||.|.....+|+||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-----LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-----LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-----HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence 346678889999999999994 44699999999987654 578899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
|||.-|+..+.+....+ ++++.++..+++..++||+|||.. .-+|||||..|||++.+|.+|++|||.|-.+...
T Consensus 108 EYCGAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred hhcCCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh
Confidence 99999999999875443 689999999999999999999987 8899999999999999999999999999887654
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
-...+.+.||+.|||||++....|..++||||+|++..||.-|+.|+..... +..-++-+.-+++......
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---------MRAIFMIPT~PPPTF~KPE 253 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP---------MRAIFMIPTKPPPTFKKPE 253 (502)
T ss_pred HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc---------cceeEeccCCCCCCCCChH
Confidence 4556677999999999999999999999999999999999999999875432 1111222222333333333
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+-...+.++++.|+-..|++|.|+.++++|-.-.
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fik 287 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIK 287 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhc
Confidence 4445599999999999999999999999987644
No 108
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-37 Score=338.39 Aligned_cols=255 Identities=23% Similarity=0.318 Sum_probs=199.1
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999954 4688999999976544334445778899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999987643 578888999999999999999998 99999999999999999999999999975321000
Q ss_pred -----------------------------------------------CcccccccCCCccccccccccccCCcchhHhHH
Q 004642 610 -----------------------------------------------SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFG 642 (740)
Q Consensus 610 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 642 (740)
......+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001123689999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCcccccccCCCCCchhhhhhc--ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 004642 643 VVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLN--QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT---MQRISQ 717 (740)
Q Consensus 643 vil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ev~~ 717 (740)
|++|||++|+.||..... ......+.. .....+...... ..+.+++.+|+ .+|++|++ +.|+++
T Consensus 236 vil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~p~~~~~s---~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 236 VILYEMLVGQPPFLAQTP-------LETQMKVINWQTSLHIPPQAKLS---PEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHHhCCCCCCCCCH-------HHHHHHHHccCCCcCCCCcccCC---HHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999999875322 111111111 111111111111 22567777765 49999987 999888
Q ss_pred HHHcC
Q 004642 718 ELLAG 722 (740)
Q Consensus 718 ~L~~~ 722 (740)
|-...
T Consensus 305 hp~f~ 309 (382)
T cd05625 305 HPFFK 309 (382)
T ss_pred CCCcC
Confidence 75443
No 109
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.3e-37 Score=326.24 Aligned_cols=254 Identities=25% Similarity=0.420 Sum_probs=201.4
Q ss_pred cccccceeeecccceEEEEEEeC-CCc----EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGK----VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (740)
.+|++.+.||+|+||.||+|.+. +|+ .||+|++..... ....+++.+|+.+++.++||||++++|++... ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 57899999999999999999653 343 389999875332 23346788999999999999999999999865 57
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++++||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 799999999999999976442 578899999999999999999998 999999999999999999999999999987
Q ss_pred cccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
........ ....++..|+|||++.+..++.++|||||||++|||++ |+.||+.... ..+...+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~ 230 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGERL 230 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhCCCCC
Confidence 65433221 12234678999999999999999999999999999998 9999864321 1122222222221
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+... .....+.+++.+||+.+|++||++.++++++...
T Consensus 231 ~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 231 PQPP---ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred CCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111 1122378899999999999999999999998754
No 110
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.6e-37 Score=328.24 Aligned_cols=247 Identities=24% Similarity=0.338 Sum_probs=193.9
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|... +|+.||+|+++..........+.+..|..++... +||||+++++++.+++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999654 6889999999764322222235566777777754 899999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 99998886543 578899999999999999999998 999999999999999999999999999875433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+...... .+... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-------~~~~~~~~~~~~~--~~~~~---~~~ 222 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-------DELFESIRVDTPH--YPRWI---TKE 222 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC--CCCCC---CHH
Confidence 45799999999999999999999999999999999999999864321 1111111111111 11111 123
Q ss_pred HHHHHHHcccCCCCCCCCHH-HHHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTMQ-RISQELL 720 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~-ev~~~L~ 720 (740)
+.+++.+||+.||++||++. ++.++..
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~~h~~ 250 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIRGHPF 250 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHcCCC
Confidence 77899999999999999984 6665543
No 111
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.1e-37 Score=338.16 Aligned_cols=256 Identities=25% Similarity=0.362 Sum_probs=200.8
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|.+.+.||+|+||.||++.. .+|+.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688999999999999999954 578999999987544333344577889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999987543 578889999999999999999998 9999999999999999999999999998643110
Q ss_pred CC-----------------------------------------------cccccccCCCccccccccccccCCcchhHhH
Q 004642 609 SS-----------------------------------------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSF 641 (740)
Q Consensus 609 ~~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 641 (740)
.. .....+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0012369999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccCCCCCchhhhhhc--ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCC---CCHHHHH
Q 004642 642 GVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLN--QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR---PTMQRIS 716 (740)
Q Consensus 642 Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ev~ 716 (740)
||++|||++|+.||..... ......+.. ..+..+..... ...+.+++.+|+. +|.+| +++.|++
T Consensus 235 Gvil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~p~~~~~---s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 235 GAIMFECLIGWPPFCSENS-------HETYRKIINWRETLYFPDDIHL---SVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred chhhhhhhcCCCCCCCCCH-------HHHHHHHHccCCccCCCCCCCC---CHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 9999999999999864321 111111111 11111111111 1237789999997 67765 6999999
Q ss_pred HHHHcC
Q 004642 717 QELLAG 722 (740)
Q Consensus 717 ~~L~~~ 722 (740)
++....
T Consensus 304 ~hp~~~ 309 (377)
T cd05629 304 SHPFFR 309 (377)
T ss_pred cCCCcC
Confidence 986543
No 112
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.9e-37 Score=319.80 Aligned_cols=256 Identities=23% Similarity=0.402 Sum_probs=203.2
Q ss_pred cccccceeeecccceEEEEEEe-----CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-----PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (740)
++|++.+.||+|+||.||+|.. .+++.|++|.+..... ....+.+.+|++++++++||||+++++++..+...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN--PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC--HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4688889999999999999964 3567899999975433 23346788999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhhcCCC--------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC
Q 004642 525 FLIYEYMERGSLFCVLHDDD--------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS 590 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 590 (740)
++||||+++++|.+++.... ....+++.++..++.|++.||+|||++ +++||||||+||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 99999999999999885321 123578999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecccceecccCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCC
Q 004642 591 NLEASVADFGTARLLHVDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGP 667 (740)
Q Consensus 591 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 667 (740)
++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~------- 232 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN------- 232 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-------
Confidence 99999999999986543221 1223345778999999988889999999999999999998 8888754221
Q ss_pred CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 668 KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
....+.+......+.... ....+.+++.+||+.||++||++.++.++|..
T Consensus 233 -~~~~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 -QEVIEMVRKRQLLPCSED---CPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHHcCCcCCCCCC---CCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 122222222222211111 12337889999999999999999999998864
No 113
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.6e-37 Score=318.96 Aligned_cols=255 Identities=28% Similarity=0.430 Sum_probs=200.5
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||.||+|.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++..++..++|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~---~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD---FSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccch---HHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 35799999999999999999965 578899999987543222 35678899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.++++... .+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 85 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999999887543 578999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 608 DSSYRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
.........|+..|+|||.+. ...++.++||||+||++|||++|+.||........ ..........++..
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~ 231 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-------LFLMSKSNFQPPKL 231 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-------heeeecCCCCCCCC
Confidence 332233446889999999874 34477899999999999999999999753321100 00000011111110
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.........+.+++.+||+.+|++||+++++++++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00011123488999999999999999999999875
No 114
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-37 Score=330.38 Aligned_cols=246 Identities=26% Similarity=0.338 Sum_probs=193.0
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHH-HHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAH-VLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||+||+|... +|+.||+|++...........+.+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999654 68999999997543332222344555554 56778999999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 99998887543 578899999999999999999998 999999999999999999999999999875433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+......... .. ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~~~~--~~---~~~ 222 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-------AEMYDNILNKPLRLKP--NI---SVS 222 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCCCCCC--CC---CHH
Confidence 45799999999999998999999999999999999999999864321 1112222222221111 11 223
Q ss_pred HHHHHHHcccCCCCCCCCHH----HHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTMQ----RISQEL 719 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~----ev~~~L 719 (740)
+.+++.+|++.||++||++. |++++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~il~~~ 252 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAKDDFLEIKNHV 252 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCCCCHHHHHcCC
Confidence 78899999999999999874 665543
No 115
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.3e-37 Score=314.45 Aligned_cols=252 Identities=27% Similarity=0.424 Sum_probs=205.7
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|++|.||+|... +|+.|++|.+...... ....+.+.+|++++++++|||++++++++.+++..++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 4778899999999999999654 6899999998754333 2335678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.++++... ...+++.++..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 80 YAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred eCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999997642 23688999999999999999999998 99999999999999999999999999998765444
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||..... ............. ......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~-~~~~~~-- 225 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-------GALILKIIRGVFP-PVSQMY-- 225 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCC-CCcccc--
Confidence 434445688999999999988899999999999999999999999864321 1111122222111 111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+.+++.+||+.+|++||++.+++++
T Consensus 226 -~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 226 -SQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -CHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 2237899999999999999999999876
No 116
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.3e-37 Score=326.94 Aligned_cols=245 Identities=24% Similarity=0.368 Sum_probs=192.5
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|... +++.||+|+++..........+.+..|..++... +||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999654 5789999999764322222235566777787764 899999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 99999887543 578899999999999999999998 999999999999999999999999999976433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+...... .+... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-------~~~~~~i~~~~~~--~~~~~---~~~ 222 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-------EELFQSIRMDNPC--YPRWL---TRE 222 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC--CCccC---CHH
Confidence 45789999999999988899999999999999999999999864321 1111111111111 11111 123
Q ss_pred HHHHHHHcccCCCCCCCCHH-HHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTMQ-RISQE 718 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~-ev~~~ 718 (740)
+.+++.+||+.||++||++. ++.++
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHHcC
Confidence 77899999999999999997 67654
No 117
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.7e-37 Score=334.88 Aligned_cols=259 Identities=24% Similarity=0.312 Sum_probs=204.3
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
..++|++.+.||+|+||.||++... +++.||+|++...........+.+.+|+++++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3568999999999999999999654 688999999965433222334567889999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||+++|+|.+++... .++...+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999988653 467788889999999999999998 99999999999999999999999999998764
Q ss_pred cCCC-cccccccCCCcccccccccc----ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 607 VDSS-YRTLRAGTYGYIAPELAYTI----VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 607 ~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+.......
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-------~~~~~~i~~~~~~~ 266 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-------VGTYSKIMDHKNSL 266 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-------HHHHHHHHcCCCcC
Confidence 3322 22345799999999998653 478899999999999999999999875321 11222232221111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHHHc
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKS--RPTMQRISQELLA 721 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~L~~ 721 (740)
..+. .......+.+++.+|+..+|++ ||++.|++++...
T Consensus 267 ~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~ 307 (370)
T cd05596 267 TFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFF 307 (370)
T ss_pred CCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence 1110 0011233788999999999998 9999999988654
No 118
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.7e-37 Score=327.61 Aligned_cols=250 Identities=23% Similarity=0.344 Sum_probs=198.7
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 528 (740)
+|+..+.||+|+||.||+|.. .+|+.||+|++...........+.+..|.+++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 477889999999999999965 468999999997643333333466778888888885 577888999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999886543 588999999999999999999998 9999999999999999999999999999765433
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ...
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~~~p~--~~~ 225 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNVSYPK--SLS 225 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCc--cCC
Confidence 3333445699999999999988899999999999999999999999875321 1122222222222111 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTM-----QRISQE 718 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~~ 718 (740)
..+.+++.+|++.+|++|++. +++.++
T Consensus 226 ---~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 226 ---KEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred ---HHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 237789999999999999974 555555
No 119
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.9e-37 Score=345.27 Aligned_cols=258 Identities=26% Similarity=0.312 Sum_probs=204.2
Q ss_pred HHhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC---
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK--- 522 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 522 (740)
...++|.+.+.||+|+||.||++. ..+|+.||||++....... .....+.+|+.++..++|+|++++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE-ADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH-HHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345799999999999999999995 4579999999997654332 33567889999999999999999988765432
Q ss_pred -----eEEEEEEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEE
Q 004642 523 -----CMFLIYEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASV 596 (740)
Q Consensus 523 -----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 596 (740)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 3689999999999999886532 234688999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCC--CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhh
Q 004642 597 ADFGTARLLHVDS--SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDV 674 (740)
Q Consensus 597 ~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 674 (740)
+|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-------~~~~~~~ 257 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-------EEVMHKT 257 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHH
Confidence 9999998764321 122345799999999999999999999999999999999999999864221 1111122
Q ss_pred hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 675 LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 675 ~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
......+ .+... ...+.+++.+||+.||++||++.+++++.
T Consensus 258 ~~~~~~~-~~~~~---~~~l~~li~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 258 LAGRYDP-LPPSI---SPEMQEIVTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred hcCCCCC-CCCCC---CHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence 2111111 11111 22378999999999999999999998763
No 120
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-37 Score=343.62 Aligned_cols=252 Identities=23% Similarity=0.269 Sum_probs=201.1
Q ss_pred cccccceeeecccceEEEEEEeC-C-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-E-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..|.+.+.||+|+||.||+|... + ++.||+|.+..... .....+.+|+++++.++||||+++++++..++..++|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE---RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 34889999999999999999543 4 67788887754332 2345678899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCC-CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 528 YEYMERGSLFCVLHDD-DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|||+++|+|.+++... .....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 9999999999888642 2234688999999999999999999998 99999999999999999999999999998764
Q ss_pred cCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 607 VDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 607 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .............+ .+
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-------~~~~~~~~~~~~~~-~~ 292 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-------REIMQQVLYGKYDP-FP 292 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCC-CC
Confidence 3222 22344699999999999998999999999999999999999999864221 11122222222211 11
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
... ...+.+++.+||+.||++||++++++++
T Consensus 293 ~~~---s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 293 CPV---SSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ccC---CHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 111 1237899999999999999999999764
No 121
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-38 Score=312.42 Aligned_cols=261 Identities=23% Similarity=0.287 Sum_probs=195.1
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-----e
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK-----C 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 523 (740)
-.|...+.+|.|+||.||+|... +++.||||+........ .+|.++|+.++|||||++.-+|.... .
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 35666889999999999999654 46899999997655321 36999999999999999998887532 3
Q ss_pred EEEEEEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CcEEEeeccc
Q 004642 524 MFLIYEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN-LEASVADFGT 601 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~DfG~ 601 (740)
..+|||||+. +|+..++... ....++...+.-+..||.+||+|||+. +|+||||||+|+|+|.+ |.+||||||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 4689999987 8888887531 223577788888999999999999998 99999999999999966 8999999999
Q ss_pred ceecccCCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhh
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLI 672 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~ 672 (740)
|+......... ....|..|+|||.+.+. .|+.+.||||.||++.||+-|+.-|...+.... +...+..+.
T Consensus 173 AK~L~~~epni-SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 173 AKVLVKGEPNI-SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred ceeeccCCCce-eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 99987655543 34679999999998875 689999999999999999999998876432100 000000000
Q ss_pred -------hhhcccCCCcch-h-hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 673 -------DVLNQRLSPPVN-Q-KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 673 -------~~~~~~l~~~~~-~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+...+.+....- . ..........+++.+++..+|.+|.++.|++.+-...
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFd 310 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFD 310 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhH
Confidence 111111111000 0 0011122377899999999999999999999886543
No 122
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-37 Score=329.43 Aligned_cols=257 Identities=25% Similarity=0.326 Sum_probs=200.2
Q ss_pred ccccceeeecccceEEEEEEe----CCCcEEEEEEccCCccc-chHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL----PEGKVVALKKLHHSETE-DSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 524 (740)
+|++.+.||+|+||.||+++. .+++.||+|++...... .....+.+.+|++++..+ +|++|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999864 35889999998753322 222345678899999999 589999999999999999
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999886543 578999999999999999999998 999999999999999999999999999986
Q ss_pred cccCCC-cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 605 LHVDSS-YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 605 ~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
...... ......||..|+|||++.+. .++.++|||||||++|||++|+.||...... .........+..... .
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~~~~~~~~~~~~~~--~ 229 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER---NTQSEVSRRILKCDP--P 229 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC---CCHHHHHHHHhcCCC--C
Confidence 543222 22335799999999998865 4788999999999999999999998642210 000111111111111 1
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
..... ...+.+++.+||+.||++|| ++++++++-..
T Consensus 230 ~~~~~---~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 270 (332)
T cd05614 230 FPSFI---GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFF 270 (332)
T ss_pred CCCCC---CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCc
Confidence 11111 12378899999999999999 78899887643
No 123
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=325.40 Aligned_cols=259 Identities=23% Similarity=0.316 Sum_probs=216.7
Q ss_pred HhcccccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 525 (740)
..+.|++.+.||.|.||.||++..+. |+.+|+|.+.+...........+.+|+++|+++. |||||.+++.+++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 45678888999999999999996654 9999999998876654444568899999999998 999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC----CcEEEeeccc
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN----LEASVADFGT 601 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~----~~~kl~DfG~ 601 (740)
+|||++.||.|.+.+... .+++.++..++.||+.+++|||+. ||+|||+||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999998765 289999999999999999999998 99999999999999743 4799999999
Q ss_pred ceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
+..... .......+||++|+|||++....|+.++||||+||++|.|++|..||..... ......+.......
T Consensus 186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~-------~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE-------FEIFLAILRGDFDF 257 (382)
T ss_pred ceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh-------hHHHHHHHcCCCCC
Confidence 998876 4455667999999999999999999999999999999999999999986543 12222333333322
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.. ..+......+.+++.+|+..||.+|+++.++++|.+-.
T Consensus 258 ~~-~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 258 TS-EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred CC-CCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 11 11223334478999999999999999999999996543
No 124
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.9e-37 Score=314.23 Aligned_cols=250 Identities=26% Similarity=0.439 Sum_probs=200.9
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.+|++.+.||+|+||.||++.++++..+|+|.+...... ...+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 457888999999999999998877888999998654332 2467889999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 80 YMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred cCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 9999999999875443 589999999999999999999998 99999999999999999999999999998654222
Q ss_pred Ccc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 610 SYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 610 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....+.+...........
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~- 225 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--------SEVVESVSAGYRLYRPKL- 225 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--------HHHHHHHHcCCcCCCCCC-
Confidence 111 11123457999999998889999999999999999999 8888864321 111112222211111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
....+.+++.+||+.+|++||++.|+++.|
T Consensus 226 --~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 --APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 223488999999999999999999999886
No 125
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8e-38 Score=333.12 Aligned_cols=257 Identities=25% Similarity=0.359 Sum_probs=205.0
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++.. .+|+.||+|+++..........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4688999999999999999955 468999999998655434444577889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 99999999999976532 588999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCc-ccccccCCCcccccccc------ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc--C
Q 004642 609 SSY-RTLRAGTYGYIAPELAY------TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR--L 679 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--l 679 (740)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+.... +
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~ 228 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-------AKTYNNIMNFQRFL 228 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-------HHHHHHHHcCCCcc
Confidence 322 23346899999999986 45677899999999999999999999864321 11112221111 1
Q ss_pred CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 680 SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 680 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..+..... ...+.+++.+|++ +|++||++++++++-...
T Consensus 229 ~~~~~~~~---~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~ 267 (330)
T cd05601 229 KFPEDPKV---SSDFLDLIQSLLC-GQKERLGYEGLCCHPFFS 267 (330)
T ss_pred CCCCCCCC---CHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcC
Confidence 11111111 1237789999998 999999999999876543
No 126
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=8.8e-37 Score=317.09 Aligned_cols=256 Identities=23% Similarity=0.322 Sum_probs=200.9
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT--VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 3678889999999999999954 5789999999865432 223467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 79 EFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred ecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999999986442 467888899999999999999998 9999999999999999999999999999765322
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||....................+.........
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG--- 223 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC---
Confidence 223347899999999999888999999999999999999999998653221111111111111111111110011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+++.+|++.+|++||+++|++++....
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 1122378999999999999999999999987654
No 127
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1e-36 Score=313.29 Aligned_cols=253 Identities=26% Similarity=0.439 Sum_probs=203.8
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|++.+.||+|+||.||+|..++++.||+|.+...... ...+.+|++++++++|+|++++++++. .+..+++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 4678999999999999999998888999999998765433 357889999999999999999999864 55689999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 80 EYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999865432 3689999999999999999999998 9999999999999999999999999999776422
Q ss_pred CC-cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SS-YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.. ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......+....
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 227 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--------PEVIQNLERGYRMPRPDN 227 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--------HHHHHHHHcCCCCCCCCC
Confidence 21 1122345678999999988889999999999999999999 9999864321 111122222222111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
. ...+.+++.+|++.+|++||+++++.+.|..
T Consensus 228 ~---~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 228 C---PEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred C---CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1 1238899999999999999999999998864
No 128
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.3e-37 Score=337.67 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=199.4
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||+++. .+++.||+|++...........+.+.+|++++++++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 688999999999999999964 4689999999875433333334678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999997643 578888899999999999999998 99999999999999999999999999975321000
Q ss_pred -------------------------------------------CcccccccCCCccccccccccccCCcchhHhHHHHHH
Q 004642 610 -------------------------------------------SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVAL 646 (740)
Q Consensus 610 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ 646 (740)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0011236999999999999999999999999999999
Q ss_pred HHHhCCCCCCcccccccCCCCCchhhhhhc--ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCC---CHHHHHHHHHc
Q 004642 647 EVLMGTHPGGLLSSLSSSSGPKIMLIDVLN--QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP---TMQRISQELLA 721 (740)
Q Consensus 647 elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~ev~~~L~~ 721 (740)
||++|+.||...... .....+.. .....+... .....+.+++.+|+ .+|++|+ ++.|++++-..
T Consensus 236 ell~G~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~---~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~ 304 (376)
T cd05598 236 EMLVGQPPFLADTPA-------ETQLKVINWETTLHIPSQA---KLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFF 304 (376)
T ss_pred ehhhCCCCCCCCCHH-------HHHHHHhccCccccCCCCC---CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCc
Confidence 999999998753321 11111111 011111111 11122667777766 5999999 99999998654
Q ss_pred C
Q 004642 722 G 722 (740)
Q Consensus 722 ~ 722 (740)
.
T Consensus 305 ~ 305 (376)
T cd05598 305 K 305 (376)
T ss_pred C
Confidence 4
No 129
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.5e-36 Score=312.06 Aligned_cols=253 Identities=28% Similarity=0.463 Sum_probs=202.9
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|++.+.||+|+||.||+|...++..+|+|.+...... .+.+.+|+.++++++|+|++++++++. ....+++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT 79 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence 3578899999999999999998888889999999764433 256889999999999999999999875 45688999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.++++.... ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 80 EYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999876432 3579999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCc-ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSY-RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
... .....++..|+|||+..+..++.++||||||+++|||++ |+.||..... ....+.+......+...
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~- 226 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--------REVLEQVERGYRMPCPQ- 226 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCC-
Confidence 211 112235678999999988889999999999999999999 8888864221 11222222222222111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.+++.+|+..+|++|||++++.+.|+.
T Consensus 227 --~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 227 --DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 122348899999999999999999999998864
No 130
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.8e-37 Score=332.83 Aligned_cols=261 Identities=24% Similarity=0.316 Sum_probs=203.6
Q ss_pred HHhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
...++|++.+.||+|+||.||++... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999664 58899999986533332233456789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 999999999999998653 478888999999999999999998 9999999999999999999999999999876
Q ss_pred ccCCC-cccccccCCCcccccccccc----ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 606 HVDSS-YRTLRAGTYGYIAPELAYTI----VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 606 ~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
..... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+......
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-------~~~~~~i~~~~~~ 265 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-------VGTYSKIMDHKNS 265 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCcc
Confidence 43222 22345799999999998754 377899999999999999999999864321 1122233322211
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHHHcC
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKS--RPTMQRISQELLAG 722 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~L~~~ 722 (740)
...+. .......+.+++.+|+..+|.+ |+++.|+++|-...
T Consensus 266 ~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~ 308 (370)
T cd05621 266 LNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFK 308 (370)
T ss_pred cCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccC
Confidence 11111 0111223678888999855544 89999999997654
No 131
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.1e-37 Score=327.68 Aligned_cols=244 Identities=25% Similarity=0.295 Sum_probs=189.7
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHH-HHHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEA-HVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|... +++.||+|++.............+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999654 5788999999754332222223444444 456788999999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999887643 467888888999999999999998 999999999999999999999999999976433333344
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+........ .... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~~---~~ 222 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEMYDNILNKPLQLK--PNIT---NS 222 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-------HHHHHHHHhCCcCCC--CCCC---HH
Confidence 45799999999999999999999999999999999999999864321 111122222211111 1111 23
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTMQRISQ 717 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~ev~~ 717 (740)
+.+++.+|++.||.+||++.+.++
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHH
Confidence 778999999999999998774333
No 132
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.3e-37 Score=329.63 Aligned_cols=244 Identities=26% Similarity=0.336 Sum_probs=195.1
Q ss_pred eeeecccceEEEEEEe----CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEec
Q 004642 456 YCIGTGGYGSVYKAEL----PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYM 531 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 531 (740)
+.||+|+||.||+++. .+|+.||+|++....... .....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999854 368999999997643322 22356778999999999999999999999999999999999
Q ss_pred cCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc
Q 004642 532 ERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY 611 (740)
Q Consensus 532 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 611 (740)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 81 RGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 9999999886543 589999999999999999999998 9999999999999999999999999999865443333
Q ss_pred ccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHH
Q 004642 612 RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDI 691 (740)
Q Consensus 612 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 691 (740)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+ ....
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-------~~~~~~i~~~~~~~p--~~~~--- 222 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-------KETMTMILKAKLGMP--QFLS--- 222 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCC---
Confidence 3445789999999999988889999999999999999999999864321 111122222222111 1111
Q ss_pred HHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 004642 692 ILVSTIAFACLSSQPKSRPTM-----QRISQE 718 (740)
Q Consensus 692 ~~l~~li~~cl~~dP~~RPs~-----~ev~~~ 718 (740)
..+.+++.+||+.||++||++ .+++++
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 237789999999999999994 555544
No 133
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.2e-36 Score=311.26 Aligned_cols=247 Identities=25% Similarity=0.417 Sum_probs=196.4
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|++++++++||||+++++++...+..++||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP--PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 3589999999999965 4789999998865432 233467899999999999999999999999999999999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc--c
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY--R 612 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~ 612 (740)
+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+......... .
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999987543 2578999999999999999999998 9999999999999999999999999998764322111 1
Q ss_pred cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHH
Q 004642 613 TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDI 691 (740)
Q Consensus 613 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 691 (740)
....++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+........... ..
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~---~~ 222 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--------QQTREAIEQGVRLPCPEL---CP 222 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--------HHHHHHHHcCCCCCCccc---CC
Confidence 11223567999999998889999999999999999998 8888764321 111222222222221111 12
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 692 ILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 692 ~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
..+.+++.+|++.+|++||++.|+.+.|.
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 34789999999999999999999999875
No 134
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.1e-36 Score=316.13 Aligned_cols=257 Identities=27% Similarity=0.373 Sum_probs=201.6
Q ss_pred hcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
.++|.+.+.||+|+||.||+|.+. .+..||+|.+...... .....+.+|+.++++++|+||+++++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE--QDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 467899999999999999999664 3567899988654332 22357889999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCCc----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC---cEE
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDE----AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL---EAS 595 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~k 595 (740)
..++||||+++++|.++++.... ...+++.++..++.||+.|++|||+. +++|+||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 99999999999999999875432 23589999999999999999999998 999999999999998755 589
Q ss_pred EeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhh
Q 004642 596 VADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLI 672 (740)
Q Consensus 596 l~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 672 (740)
|+|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--------~~~~ 231 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--------QEVM 231 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHH
Confidence 9999999876322211 111233568999999998899999999999999999997 9999864221 1122
Q ss_pred hhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 673 DVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 673 ~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
+.+........+... ...+.+++.+|++.+|++||++.+|+++|..
T Consensus 232 ~~~~~~~~~~~~~~~---~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 232 EFVTGGGRLDPPKGC---PGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHcCCcCCCCCCC---CHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 222222111111111 2237899999999999999999999999863
No 135
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.1e-36 Score=311.89 Aligned_cols=251 Identities=22% Similarity=0.374 Sum_probs=202.5
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||++... +++.||+|.+...... ...+.+.+|+++++.++|+|++++++++.+++..+++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS--SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch--HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4788999999999999999654 6899999998654322 234678889999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++++|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 79 YCDGGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999999988864322 2578899999999999999999998 99999999999999999999999999998765443
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||..... ............. +.....
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~-~~~~~~-- 224 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-------KNLILKVCQGSYK-PLPSHY-- 224 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-------HHHHHHHhcCCCC-CCCccc--
Confidence 333445688999999999988899999999999999999999999864221 1111111111111 111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+.+++.+||+.||++||++.|++..
T Consensus 225 -~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 225 -SYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1237899999999999999999999864
No 136
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.4e-37 Score=328.57 Aligned_cols=241 Identities=25% Similarity=0.322 Sum_probs=190.4
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHH-HHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAH-VLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|.. .+|+.||+|++...........+.+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3599999999999954 468999999997643333233345555655 46778999999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|..++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 99988886543 588999999999999999999998 999999999999999999999999999875433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........+.... .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~ 222 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-------AEMYDNILHKPLVLRP-----GASLT 222 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-------HHHHHHHHcCCccCCC-----CCCHH
Confidence 45799999999999999999999999999999999999999864321 1122222222221111 11223
Q ss_pred HHHHHHHcccCCCCCCCCHHH
Q 004642 694 VSTIAFACLSSQPKSRPTMQR 714 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~e 714 (740)
+.+++.+|++.+|++||++++
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCC
Confidence 778999999999999998753
No 137
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6.3e-37 Score=319.03 Aligned_cols=259 Identities=23% Similarity=0.300 Sum_probs=204.1
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|+..+.||+|+||.||++.. .+++.||+|.+...........+.+.+|+.++++++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 367788999999999999954 4689999999876544433334567789999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++..... ..+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999988865332 2588999999999999999999998 99999999999999999999999999997654322
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
. .....|+..|+|||++.+..++.++||||+||++|+|++|+.||...... ........... ..........
T Consensus 157 ~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~----~~~~~~~~~~~-~~~~~~~~~~-- 228 (285)
T cd05630 157 T-IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERLVK-EVQEEYSEKF-- 228 (285)
T ss_pred c-ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc----chHHHHHhhhh-hhhhhcCccC--
Confidence 2 22347899999999999888999999999999999999999998743210 00011111111 0111111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHcC
Q 004642 690 DIILVSTIAFACLSSQPKSRPT-----MQRISQELLAG 722 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~L~~~ 722 (740)
...+.+++.+||+.||++||+ ++|++++-...
T Consensus 229 -~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~ 265 (285)
T cd05630 229 -SPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK 265 (285)
T ss_pred -CHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence 123789999999999999999 89999877654
No 138
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-36 Score=329.76 Aligned_cols=262 Identities=23% Similarity=0.356 Sum_probs=206.0
Q ss_pred HHHhcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeee
Q 004642 446 INATEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFC 518 (740)
Q Consensus 446 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 518 (740)
....++|.+.+.||+|+||.||+|.+. .++.||+|+++..... ...+.+.+|++++.++. ||||+++++++
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 334567888899999999999999753 3468999999765332 22457889999999997 99999999999
Q ss_pred eecCeEEEEEEeccCCCchhhhcCCCc-----------------------------------------------------
Q 004642 519 LHKKCMFLIYEYMERGSLFCVLHDDDE----------------------------------------------------- 545 (740)
Q Consensus 519 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 545 (740)
...+..++||||+++|+|.++++....
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999865321
Q ss_pred ------------------------------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 004642 546 ------------------------------------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISS 583 (740)
Q Consensus 546 ------------------------------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 583 (740)
...+++.++..++.||+.||+|||+. +++||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCc
Confidence 12367888999999999999999988 999999999
Q ss_pred CceEEcCCCcEEEeecccceecccCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccc
Q 004642 584 NNILLDSNLEASVADFGTARLLHVDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSS 660 (740)
Q Consensus 584 ~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~ 660 (740)
+||++++++.+||+|||+++....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999986543221 1122356789999999998889999999999999999998 8889754221
Q ss_pred cccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 661 LSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+........+... ...+.+++.+||+.+|++||+++|+++.|...
T Consensus 348 -------~~~~~~~~~~~~~~~~p~~~---~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 348 -------NEQFYNAIKRGYRMAKPAHA---SDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred -------hHHHHHHHHcCCCCCCCCCC---CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11122222222222111111 23488999999999999999999999998753
No 139
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.6e-37 Score=326.63 Aligned_cols=246 Identities=24% Similarity=0.326 Sum_probs=191.9
Q ss_pred eeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHH-HHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAH-VLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|+.. +|+.||+|++.............+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999654 68899999997544333223344555554 57889999999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|...+.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 99988886533 578888999999999999999998 999999999999999999999999999876433333334
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~-----~~~~~ 222 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-------SQMYDNILHKPLQLPG-----GKTVA 222 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-------HHHHHHHhcCCCCCCC-----CCCHH
Confidence 45789999999999988899999999999999999999999864221 1112222222222111 11223
Q ss_pred HHHHHHHcccCCCCCCCCHH----HHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTMQ----RISQEL 719 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~----ev~~~L 719 (740)
+.+++.+|++.||++||++. |++++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~~ 252 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAKADFLEIKNHV 252 (321)
T ss_pred HHHHHHHHccCCHhhcCCCCCCHHHHhCCC
Confidence 78899999999999998754 555443
No 140
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=8.7e-37 Score=318.05 Aligned_cols=258 Identities=22% Similarity=0.268 Sum_probs=202.4
Q ss_pred cccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|+..+.||+|+||+||++.. .+++.||+|.+.............+.+|++++++++|+|++++.+++..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778999999999999955 46899999998765443333345678899999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 999999988865432 2589999999999999999999998 999999999999999999999999999976543222
Q ss_pred cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHH
Q 004642 611 YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQD 690 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 690 (740)
.....|+..|+|||++.+..++.++|+||+||++|||++|+.||........ ............ ..... ..
T Consensus 158 -~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~---~~~~~~~~~~~~--~~~~~---~~ 228 (285)
T cd05632 158 -IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK---REEVDRRVLETE--EVYSA---KF 228 (285)
T ss_pred -ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhhhccc--cccCc---cC
Confidence 2334789999999999988899999999999999999999999864321000 000001111110 01111 11
Q ss_pred HHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHcC
Q 004642 691 IILVSTIAFACLSSQPKSRPT-----MQRISQELLAG 722 (740)
Q Consensus 691 ~~~l~~li~~cl~~dP~~RPs-----~~ev~~~L~~~ 722 (740)
...+.+++.+|++.||++||+ +.+++++-...
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhh
Confidence 123778999999999999999 77888875443
No 141
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.2e-36 Score=311.12 Aligned_cols=254 Identities=26% Similarity=0.426 Sum_probs=201.8
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|++.++||+|+||.||+|...++..||+|++...... .+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 3579999999999999999998777778999999754332 2568899999999999999999998754 5579999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 80 EYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EcCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999975432 2578999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCcc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.... ....++..|+|||+..+..++.++||||||+++|||+| |+.||..... . ...+........+...
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~- 226 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------R-EVLDQVERGYRMPCPP- 226 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh-------H-HHHHHHhcCCCCCCcc-
Confidence 2211 22346678999999988889999999999999999999 7888764221 1 1111111111111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+++.+|++.+|++||+++++.+.|+..
T Consensus 227 --~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 227 --ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1223478999999999999999999999998754
No 142
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.2e-36 Score=318.17 Aligned_cols=259 Identities=28% Similarity=0.436 Sum_probs=205.1
Q ss_pred cccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
.+|.+.+.||+|+||.||+|... ++..+++|.+..... ...+.+.+|++++++++|+||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH---HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 46788899999999999999642 356688998865443 224678899999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCc-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC
Q 004642 524 MFLIYEYMERGSLFCVLHDDDE-------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS 590 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 590 (740)
.++||||+++++|.+++..... ...+++..++.++.||+.|++|||++ +++||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 9999999999999999865321 23489999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecccCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCC
Q 004642 591 NLEASVADFGTARLLHVDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGP 667 (740)
Q Consensus 591 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 667 (740)
++.++|+|||+++....... ......++..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------- 231 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------- 231 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------
Confidence 99999999999976543221 1223356788999999998889999999999999999999 9999764321
Q ss_pred CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 668 KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
.. ..+............ .....+.+++.+||+.+|++||++.++++.|....++
T Consensus 232 ~~-~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 232 TE-VIECITQGRVLERPR---VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HH-HHHHHhCCCCCCCCc---cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11 111111111111111 1122378999999999999999999999999877543
No 143
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1e-36 Score=321.56 Aligned_cols=266 Identities=19% Similarity=0.254 Sum_probs=200.9
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|.+.+.||+|+||.||+|..+ +++.||+|++........ ...+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA--PCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc--chhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 57899999999999999999654 678899999875443221 245778999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++ +|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 84 EYLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred eCCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 99986 78777765432 478899999999999999999998 9999999999999999999999999999765433
Q ss_pred CCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhh------h
Q 004642 609 SSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLI------D 673 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~------~ 673 (740)
........++..|+|||++.+ ..++.++||||+||++|||+||+.||........ ......... +
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 333334468899999998865 4578899999999999999999999864321000 000000000 0
Q ss_pred hhcccCCCc----chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 674 VLNQRLSPP----VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 674 ~~~~~l~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
..+...+.. ...........+.+++.+|++.||++|||++|++++-....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 000000000 00000011223679999999999999999999999876654
No 144
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.5e-36 Score=316.97 Aligned_cols=257 Identities=26% Similarity=0.451 Sum_probs=203.6
Q ss_pred cccccceeeecccceEEEEEEe------CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL------PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
++|.+.+.||+|+||.||++.. .++..+|+|.+..... ...+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD---NARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH---HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 5788899999999999999964 2346689998865432 235678999999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCC----------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 004642 524 MFLIYEYMERGSLFCVLHDDD----------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE 593 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 593 (740)
.++||||+++++|.+++.... ....+++.++..++.|++.||+|||++ +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999999986432 123489999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCch
Q 004642 594 ASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIM 670 (740)
Q Consensus 594 ~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 670 (740)
++|+|||+++........ .....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ...
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-------~~~ 231 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEV 231 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHH
Confidence 999999999765432211 122345778999999998889999999999999999998 8988764321 111
Q ss_pred hhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 671 LIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 671 ~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
...+...... ...... ...+.+++.+||+.+|.+||++.|+.+.|+...
T Consensus 232 ~~~i~~~~~~-~~~~~~---~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 232 IECITQGRVL-QRPRTC---PKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HHHHHcCCcC-CCCCCC---CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1112111111 111111 123889999999999999999999999987654
No 145
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.1e-36 Score=310.32 Aligned_cols=246 Identities=25% Similarity=0.401 Sum_probs=196.1
Q ss_pred eeecccceEEEEEEe---CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 457 CIGTGGYGSVYKAEL---PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
.||+|+||.||+|.+ .+++.+|+|++..... +....+.+.+|+.+++.++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN-DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999954 3578899999875433 3344678899999999999999999999885 4567899999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc--
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY-- 611 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~-- 611 (740)
|+|.+++.... .+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 80 GPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999986543 578999999999999999999998 9999999999999999999999999999876433221
Q ss_pred -ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 612 -RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 612 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.....++..|+|||.+....++.++|||||||++|||++ |+.||..... ....+.+.....++.+...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~~-- 223 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--------NEVTQMIESGERMECPQRC-- 223 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHCCCCCCCCCCC--
Confidence 112234578999999988888899999999999999998 9999864321 1122223322222221112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
...+.+++.+||+.||++||++++|.++|..
T Consensus 224 -~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 224 -PPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred -CHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 2337899999999999999999999999875
No 146
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.2e-36 Score=311.21 Aligned_cols=254 Identities=23% Similarity=0.361 Sum_probs=203.1
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccc--hHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETED--SAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
+.|.+.+.||+|++|.||++.. .+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5688999999999999999954 468999999987543221 2234678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|+||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999887543 578889999999999999999998 99999999999999999999999999997654
Q ss_pred cCCCcc---cccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcc
Q 004642 607 VDSSYR---TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPV 683 (740)
Q Consensus 607 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 683 (740)
...... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||...... ...............
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 228 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-------AAIFKIATQPTNPQL 228 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-------HHHHHHhccCCCCCC
Confidence 322111 2345788999999999988999999999999999999999998642211 111111111111111
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
... ....+.+++.+||..+|++||++.|++++.
T Consensus 229 ~~~---~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 229 PSH---VSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred Ccc---CCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 111 122378899999999999999999999864
No 147
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.8e-36 Score=317.83 Aligned_cols=256 Identities=29% Similarity=0.422 Sum_probs=198.9
Q ss_pred cccccceeeecccceEEEEEEeCC-Cc--EEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPE-GK--VVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|...+ +. .+++|.++.... ....+.+.+|++++.++ +||||+++++++...+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS--ENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC--HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 578899999999999999996643 33 478888764322 22346788999999999 7999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCC-------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 004642 526 LIYEYMERGSLFCVLHDDD-------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL 592 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 592 (740)
+++||+++++|.++++... ....+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 9999999999999986532 112488999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchh
Q 004642 593 EASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIML 671 (740)
Q Consensus 593 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 671 (740)
.+||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |..||..... .. .
T Consensus 157 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-------~~-~ 227 (297)
T cd05089 157 ASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-------AE-L 227 (297)
T ss_pred eEEECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HH-H
Confidence 99999999986432111 1111233567999999988889999999999999999997 9999864321 11 1
Q ss_pred hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 672 IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 672 ~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+.+.+.......... ...+.+++.+||+.+|.+||+++++++.|...
T Consensus 228 ~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 228 YEKLPQGYRMEKPRNC---DDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHHHhcCCCCCCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1222222222111111 12378999999999999999999999988654
No 148
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.2e-36 Score=317.59 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=204.8
Q ss_pred hcccccceeeecccceEEEEEEe------CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeec
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL------PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHK 521 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 521 (740)
.++|.+.+.||+|+||.||++.. ..+..||+|+++..... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS--SEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh--HHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 45799999999999999999953 23557999998754332 2346788999999999 799999999999999
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
+..+++|||+++|+|.++++.... ..+++.++..++.|++.||+|||++ +++|+||||+||+++.++.++++|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999975432 2379999999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhccc
Q 004642 602 ARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 602 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
++........ .....++..|+|||.+.+..++.++||||+||++|||++ |..||..... .....+.....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-------~~~~~~~~~~~ 260 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-------DSKFYKLIKEG 260 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-------hHHHHHHHHcC
Confidence 9865433221 122245778999999998889999999999999999998 9999764321 11122222222
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
......... ...+.+++.+|++.+|++||++.|+++.|.+
T Consensus 261 ~~~~~~~~~---~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 261 YRMAQPEHA---PAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CcCCCCCCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 222111111 2248899999999999999999999999875
No 149
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.6e-37 Score=330.22 Aligned_cols=263 Identities=25% Similarity=0.350 Sum_probs=204.9
Q ss_pred HHHHHHhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec
Q 004642 443 EDLINATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK 521 (740)
Q Consensus 443 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (740)
.++....++|++.+.||+|+||.||++... +++.||+|++...........+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344455689999999999999999999654 6789999998654333333345678899999999999999999999999
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
+..++||||+++|+|.+++... .++...+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999988653 477888899999999999999999 999999999999999999999999999
Q ss_pred ceecccCCC-cccccccCCCcccccccccc----ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhc
Q 004642 602 ARLLHVDSS-YRTLRAGTYGYIAPELAYTI----VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLN 676 (740)
Q Consensus 602 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+..
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~ 261 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-------VGTYSKIMN 261 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-------HHHHHHHHc
Confidence 987643222 22345799999999998753 378899999999999999999999874321 111222222
Q ss_pred cc--CCCcchhhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHHHcC
Q 004642 677 QR--LSPPVNQKIVQDIILVSTIAFACLSSQPKS--RPTMQRISQELLAG 722 (740)
Q Consensus 677 ~~--l~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~L~~~ 722 (740)
.. +..+..... ...+.+++.+|+..+|.+ ||+++|++++....
T Consensus 262 ~~~~~~~~~~~~~---s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~ 308 (371)
T cd05622 262 HKNSLTFPDDNDI---SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 308 (371)
T ss_pred CCCcccCCCcCCC---CHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccC
Confidence 11 111111111 223778999999844433 78999999987654
No 150
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-36 Score=327.01 Aligned_cols=263 Identities=23% Similarity=0.285 Sum_probs=198.0
Q ss_pred HhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC----
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK---- 522 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 522 (740)
..++|++.+.||+|+||.||++.. .+|+.||+|++...... ......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 457899999999999999999955 46899999999754332 223467789999999999999999999986543
Q ss_pred --eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 523 --CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 523 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
..++||||+++ ++.+.++. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 47999999976 55555532 478888999999999999999999 99999999999999999999999999
Q ss_pred cceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCc----
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKI---- 669 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~---- 669 (740)
+++..... .......||..|+|||++.+..++.++||||+||++|+|++|+.||........ ......
T Consensus 169 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 169 LARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred CccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 99764322 222334789999999999999999999999999999999999999974321100 000000
Q ss_pred ----hhhhhhcccCCCc---------------chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 670 ----MLIDVLNQRLSPP---------------VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 670 ----~~~~~~~~~l~~~---------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
............. ...........+.+++.+||+.||++|||+.|++++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 318 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 0000000000000 000000012337899999999999999999999998753
No 151
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-36 Score=314.17 Aligned_cols=256 Identities=24% Similarity=0.370 Sum_probs=199.7
Q ss_pred cccccceeeecccceEEEEEEeC-CCc----EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGK----VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (740)
++|++.+.||+|+||.||+|.+. +|+ .+++|.+..... .....++..|+.++++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG--RQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc--hHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 57888899999999999999653 444 477788754322 2234677888889999999999999998764 457
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++++||+++|+|.+++..... .+++..+..++.||+.||+|||+. +++||||||+||++++++.+||+|||.++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 889999999999999975432 589999999999999999999998 999999999999999999999999999987
Q ss_pred cccCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
...... ......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ....+.+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~ 230 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--------HEVPDLLEKGERL 230 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCcC
Confidence 643322 1223356788999999998889999999999999999998 9999864321 1112222222221
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
...... ...+.+++.+||..+|++||++.|+++.|.....
T Consensus 231 ~~~~~~---~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 AQPQIC---TIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCCC---CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 111111 1236789999999999999999999999877543
No 152
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.5e-36 Score=315.65 Aligned_cols=256 Identities=25% Similarity=0.434 Sum_probs=202.5
Q ss_pred ccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (740)
+|++.+.||+|+||.||+|... ....+++|.+...... ...+.+.+|+++++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS--SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH--HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999999642 2357888888754432 2346788999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhhcCCC---------------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 004642 525 FLIYEYMERGSLFCVLHDDD---------------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISS 583 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 583 (740)
++++||+++++|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 99999999999999875421 113588999999999999999999998 999999999
Q ss_pred CceEEcCCCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccc
Q 004642 584 NNILLDSNLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSS 660 (740)
Q Consensus 584 ~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~ 660 (740)
+||++++++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~- 234 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA- 234 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-
Confidence 9999999999999999999765432221 122345678999999988889999999999999999998 999976422
Q ss_pred cccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 661 LSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
...+.+.+............ ...+.+++.+||+.+|++||+++|+++.|+..
T Consensus 235 -------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 235 -------PERLFNLLKTGYRMERPENC---SEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred -------HHHHHHHHhCCCCCCCCCCC---CHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 11222233222222211111 22378999999999999999999999999764
No 153
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.5e-36 Score=314.41 Aligned_cols=259 Identities=26% Similarity=0.370 Sum_probs=199.9
Q ss_pred cccceeeecccceEEEEEE-----eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeE
Q 004642 452 FHIKYCIGTGGYGSVYKAE-----LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCM 524 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~-----~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 524 (740)
|.+.+.||+|+||+||++. ..+++.||+|.+...... .....+.+|++++++++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ--QNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 3788999999999998763 235788999998764322 2346788999999999999999999988753 468
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
+++|||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++.
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999999998653 489999999999999999999998 999999999999999999999999999987
Q ss_pred cccCCCc---ccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccc-c----cC--CCCCchhhhh
Q 004642 605 LHVDSSY---RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSL-S----SS--SGPKIMLIDV 674 (740)
Q Consensus 605 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~-~----~~--~~~~~~~~~~ 674 (740)
....... .....++..|+|||...+..++.++||||||+++|||++|+.|+...... . .. ........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6432221 12224567799999998888999999999999999999999997542210 0 00 0011111222
Q ss_pred hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 675 LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 675 ~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
++.....+... .....+.+++.+||+.+|++||+++++++.|...
T Consensus 237 ~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCPK---NCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCCCCC---CCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 22222211111 1123488999999999999999999999998765
No 154
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-36 Score=316.67 Aligned_cols=256 Identities=24% Similarity=0.377 Sum_probs=201.1
Q ss_pred cccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
.+|.+.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++..++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE--GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 35777888999999999999653 257899999975443 2334678899999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCC-------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC
Q 004642 524 MFLIYEYMERGSLFCVLHDDD-------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS 590 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 590 (740)
.++++||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecC
Confidence 999999999999998885211 123478899999999999999999998 9999999999999999
Q ss_pred CCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCC
Q 004642 591 NLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGP 667 (740)
Q Consensus 591 ~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 667 (740)
++.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------- 232 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------- 232 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-------
Confidence 999999999998865432211 122345789999999988889999999999999999998 8888754221
Q ss_pred CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 668 KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
......+...... +.... ....+.+++.+||+.+|++||+++|+++.|+.
T Consensus 233 ~~~~~~i~~~~~~-~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQVL-PCPDD---CPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCcC-CCCCC---CCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1112222222211 11111 22237899999999999999999999999863
No 155
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.3e-36 Score=308.61 Aligned_cols=252 Identities=27% Similarity=0.435 Sum_probs=200.9
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
++|.+.+.||+|+||.||++...++..+|+|.+...... .+.+.+|++++++++|+|++++++++. .+..+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM----PEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc----HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence 568889999999999999998877778999988654332 356888999999999999999999875 456889999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.++++.... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||.++......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 81 FMGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999976432 3578999999999999999999998 99999999999999999999999999998764322
Q ss_pred Cc-ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 610 SY-RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 610 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.. .....++..|+|||+..+..++.++||||||+++|||++ |+.||..... ....+.+......+...
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~-- 226 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--------REVLEQVERGYRMPCPQ-- 226 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCc--
Confidence 11 122245678999999988889999999999999999999 8888764221 11111121221111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.+++.+||+.+|++||+++++.+.|+.
T Consensus 227 -~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 -GCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 112348899999999999999999999999875
No 156
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.3e-36 Score=319.62 Aligned_cols=256 Identities=28% Similarity=0.419 Sum_probs=199.1
Q ss_pred cccccceeeecccceEEEEEEeC-CCc--EEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGK--VVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|.+. ++. .+|+|.+..... ....+.+.+|++++.++ +||||+++++++.+.+..+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC--HHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 57888999999999999999654 454 457777654322 23346788999999999 8999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCc-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 004642 526 LIYEYMERGSLFCVLHDDDE-------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL 592 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 592 (740)
+||||+++++|.++++.... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCC
Confidence 99999999999999875421 23578999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchh
Q 004642 593 EASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIML 671 (740)
Q Consensus 593 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 671 (740)
.+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~ 232 (303)
T cd05088 162 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AEL 232 (303)
T ss_pred cEEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--------HHH
Confidence 9999999998643211 11112234678999999988889999999999999999998 9999854321 111
Q ss_pred hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 672 IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 672 ~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+.+.......... .....+.+++.+||+.+|++||+++++++++...
T Consensus 233 ~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 233 YEKLPQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHHhcCCcCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11121111111111 1122378999999999999999999999998654
No 157
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1e-36 Score=324.23 Aligned_cols=260 Identities=25% Similarity=0.339 Sum_probs=198.6
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++... +++.||+|++...........+.+.+|..++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999654 68999999997533333334567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 99999999999965332 578899999999999999999999 9999999999999999999999999999765433
Q ss_pred CCc-ccccccCCCccccccccc-----cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 609 SSY-RTLRAGTYGYIAPELAYT-----IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
... .....||+.|+|||++.. ..++.++||||+||++|||++|+.||...... .....+........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-------~~~~~i~~~~~~~~ 228 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-------ETYGKIMNHKEHFQ 228 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-------HHHHHHHcCCCccc
Confidence 222 223469999999999863 45778999999999999999999998643210 11111111110000
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCC--CCCCHHHHHHHHHc
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPK--SRPTMQRISQELLA 721 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~ev~~~L~~ 721 (740)
...........+.+++.+|+..+++ .||++.+++++-..
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~ 269 (331)
T cd05597 229 FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFF 269 (331)
T ss_pred CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCC
Confidence 0000001122367788887755443 37899999999654
No 158
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.5e-36 Score=317.74 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=204.3
Q ss_pred HhcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeee
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLH 520 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 520 (740)
..++|++.+.||+|+||.||++... ....+|+|.+...... .....+.+|++++.++ +|+||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 4567889999999999999999653 2367999998764332 2346788999999999 89999999999999
Q ss_pred cCeEEEEEEeccCCCchhhhcCC-------------CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceE
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDD-------------DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNIL 587 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIl 587 (740)
++..+++|||+++|+|.++++.. .....+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence 99999999999999999998642 1234689999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEeecccceecccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccC
Q 004642 588 LDSNLEASVADFGTARLLHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSS 664 (740)
Q Consensus 588 l~~~~~~kl~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~ 664 (740)
++.++.+||+|||.++.+....... ....++..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---- 240 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---- 240 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH----
Confidence 9999999999999998764322111 11234678999999988889999999999999999998 8888754221
Q ss_pred CCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 665 SGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 665 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....+.+.......... .....+.+++.+||+.+|++|||+.|++++|...
T Consensus 241 ----~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 241 ----EELFKLLKEGYRMEKPQ---NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred ----HHHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 11112222221111111 1123478999999999999999999999998753
No 159
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.6e-36 Score=308.50 Aligned_cols=246 Identities=22% Similarity=0.375 Sum_probs=194.8
Q ss_pred eecccceEEEEEEeC---CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 458 IGTGGYGSVYKAELP---EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
||+|+||.||+|.+. .+..||+|++..... ....+.+.+|++++++++||||+++++++.. ...++||||++++
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccC--hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 899999999999653 356799999876532 3345678999999999999999999998854 5689999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc-
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT- 613 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~- 613 (740)
+|.+++.... ..+++.++..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....+.....
T Consensus 80 ~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 80 PLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9999986533 2588999999999999999999998 999999999999999999999999999986543322211
Q ss_pred --ccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHH
Q 004642 614 --LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQD 690 (740)
Q Consensus 614 --~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 690 (740)
...++..|+|||++....++.++|||||||++||+++ |+.||..... ......+.+......+. ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~---~~ 223 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--------PEVMSFIEQGKRLDCPA---EC 223 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHHCCCCCCCCC---CC
Confidence 1123578999999988889999999999999999996 9999864321 11222222222222211 11
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 691 IILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 691 ~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
...+.+++.+||+.+|++||++.++.+.|...
T Consensus 224 ~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 224 PPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 23478999999999999999999999998754
No 160
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=320.81 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=216.6
Q ss_pred HHHHHHhcccccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec
Q 004642 443 EDLINATEDFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK 521 (740)
Q Consensus 443 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (740)
++++-...+..+.++||-|.||.||.|.|+. .-.||||.++..... +++|.+|+.+|+.++|||+|+++|+|...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----veEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh----HHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 3344445567788999999999999998865 567999999876554 67899999999999999999999999999
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
..+|||.|||.+|+|.++|.+.... .++....+.++.||+.||+||..+ .+|||||..+|+|+.++..|||.|||+
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccch
Confidence 9999999999999999999876643 577778889999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCccccccc---CCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcc
Q 004642 602 ARLLHVDSSYRTLRAG---TYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQ 677 (740)
Q Consensus 602 a~~~~~~~~~~~~~~g---t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
++++..+... .+.| +..|.|||.+....++.|+|||+|||+|||+.| |-.||.... .....+.+.+
T Consensus 412 sRlMtgDTYT--AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid--------lSqVY~LLEk 481 (1157)
T KOG4278|consen 412 SRLMTGDTYT--AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQVYGLLEK 481 (1157)
T ss_pred hhhhcCCcee--cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc--------HHHHHHHHhc
Confidence 9998766543 2333 578999999998899999999999999999998 777765432 1234555666
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 678 RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 678 ~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
..+...+.... ..++++|+.||++.|.+||+++|+-+.++.
T Consensus 482 gyRM~~PeGCP---pkVYeLMraCW~WsPsDRPsFaeiHqafEt 522 (1157)
T KOG4278|consen 482 GYRMDGPEGCP---PKVYELMRACWNWSPSDRPSFAEIHQAFET 522 (1157)
T ss_pred cccccCCCCCC---HHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence 66555544333 348899999999999999999999988864
No 161
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.5e-37 Score=325.80 Aligned_cols=261 Identities=22% Similarity=0.332 Sum_probs=204.7
Q ss_pred ccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-C-----CccceeeeeeeecCe
Q 004642 451 DFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-H-----RNIVKLYGFCLHKKC 523 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~ 523 (740)
+|.+.+.||+|.||.|-+| +.++++.||||+++.... +..+...|+.++..++ | -|+|++++++...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~----f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR----FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH----HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 8999999999999999999 666799999999987543 4567788999999996 4 389999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC--CcEEEeeccc
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN--LEASVADFGT 601 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~--~~~kl~DfG~ 601 (740)
.+||+|.++. +|++++....-. .++...+..|+.||+.||.+||+. +|||+||||+|||+.+- ..+||+|||.
T Consensus 263 lciVfELL~~-NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 9999999976 999999876543 589999999999999999999998 99999999999999754 4699999999
Q ss_pred ceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccc--------------------
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSL-------------------- 661 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~-------------------- 661 (740)
|++... ... ..+.+..|+|||++.|.+|+.+.||||||||++||++|..-|....+.
T Consensus 338 Sc~~~q--~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 338 SCFESQ--RVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred ccccCC--cce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 987542 222 447889999999999999999999999999999999997766543220
Q ss_pred -------ccC--CC-----C-C-----------chhhhhhcccCCCcc----hhhhH-HHHHHHHHHHHHcccCCCCCCC
Q 004642 662 -------SSS--SG-----P-K-----------IMLIDVLNQRLSPPV----NQKIV-QDIILVSTIAFACLSSQPKSRP 710 (740)
Q Consensus 662 -------~~~--~~-----~-~-----------~~~~~~~~~~l~~~~----~~~~~-~~~~~l~~li~~cl~~dP~~RP 710 (740)
... .. . + .......+....+.. ..... .+...+.+++++|+.+||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 000 00 0 0 000001111111101 01111 2334489999999999999999
Q ss_pred CHHHHHHHHHcCC
Q 004642 711 TMQRISQELLAGK 723 (740)
Q Consensus 711 s~~ev~~~L~~~~ 723 (740)
|+.|.++|-+...
T Consensus 495 tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 495 TPAQALNHPFLTG 507 (586)
T ss_pred CHHHHhcCccccc
Confidence 9999999987763
No 162
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.1e-37 Score=313.78 Aligned_cols=256 Identities=29% Similarity=0.451 Sum_probs=202.5
Q ss_pred cccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|++.+.||+|+||+||+++.. +++.||+|++......... .....+|+.++++++||||+++++++......++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 677899999999999999655 5678999999887654333 23445699999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+++++|.+++.. ...+++..+..++.|+++||++||+. +++|+||||+||+++.++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 80 CPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp ETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred cccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 999999999982 23689999999999999999999999 999999999999999999999999999986533344
Q ss_pred cccccccCCCcccccccc-ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 611 YRTLRAGTYGYIAPELAY-TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
......++..|+|||++. +..++.++||||+|+++|+|++|..||...... .................. .....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~ 228 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD----DQLEIIEKILKRPLPSSS-QQSRE 228 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH----HHHHHHHHHHHTHHHHHT-TSHTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccch----hhhhhhhhcccccccccc-cccch
Confidence 445567899999999998 788999999999999999999999998753100 000111111111110000 00001
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
....+.+++.+||+.||++||++.+++++-
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~~~ 258 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLKHP 258 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhcCC
Confidence 124589999999999999999999998763
No 163
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.6e-36 Score=313.46 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=200.8
Q ss_pred cccccceeeecccceEEEEEEe-----CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cC
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-----PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KK 522 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 522 (740)
++|++.+.||+|+||.||++.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA---EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH---HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 5788899999999999999964 3578999999875432 234678899999999999999999998754 34
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 68999999999999999975432 589999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCCcc---cccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccC-CCC-------Cchh
Q 004642 603 RLLHVDSSYR---TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS-SGP-------KIML 671 (740)
Q Consensus 603 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~-~~~-------~~~~ 671 (740)
+......... ....++..|+|||+..+..++.++|||||||++|||++|..|+......... ... ...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 8764332211 1122345699999998888999999999999999999998775432211000 000 0111
Q ss_pred hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 672 IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 672 ~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+.+......+..... ...+.+++.+||+.+|++|||+.|+++.|...
T Consensus 236 ~~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGC---PAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCC---CHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1222222211111111 12388999999999999999999999998764
No 164
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.8e-36 Score=315.80 Aligned_cols=263 Identities=21% Similarity=0.271 Sum_probs=198.7
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|++|.||+|... +++.||+|++....... ...+.+.+|+.++++++|||++++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-GVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC-CchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 4788899999999999999654 68999999987543222 223677889999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|++ ++|.+++........+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 998 58888887654444689999999999999999999998 99999999999999999999999999997654333
Q ss_pred CcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCC-----CCchhhh-
Q 004642 610 SYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSG-----PKIMLID- 673 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~-----~~~~~~~- 673 (740)
.......+++.|+|||++.+. .++.++|||||||++|||+||+.||........ ... ......+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 333334678899999988654 468899999999999999999999864321100 000 0000000
Q ss_pred --hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 674 --VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 674 --~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...................++.+++.+||+.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000000000112236789999999999999999999875
No 165
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.9e-36 Score=313.51 Aligned_cols=259 Identities=21% Similarity=0.328 Sum_probs=206.0
Q ss_pred hcccccceeeecccceEEEEEEeCC-----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee-cC
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE-----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH-KK 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 522 (740)
.++|++.+.||+|+||.||+|...+ +..|++|++..... ....+.+.+|+.++++++|+||+++++++.. +.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS--EIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 4688899999999999999997655 68899998875432 2335778899999999999999999998876 56
Q ss_pred eEEEEEEeccCCCchhhhcCCCcc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEe
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEA-----IELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVA 597 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 597 (740)
..++++||+++++|.+++...... ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999998654322 4689999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhh
Q 004642 598 DFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDV 674 (740)
Q Consensus 598 DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 674 (740)
|||+++.+...... .....++..|+|||++.+..++.++|||||||++||+++ |+.||...... .....
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~ 231 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--------EMAAY 231 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--------HHHHH
Confidence 99999865433221 122345778999999988889999999999999999999 99998643221 11222
Q ss_pred hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 675 LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 675 ~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
+........... ....+.+++.+||+.||++||++.|+++.|....
T Consensus 232 ~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 232 LKDGYRLAQPIN---CPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred HHcCCCCCCCCc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 222211111111 1123789999999999999999999999997654
No 166
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.4e-36 Score=314.30 Aligned_cols=254 Identities=26% Similarity=0.418 Sum_probs=198.3
Q ss_pred HHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeec---
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHK--- 521 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--- 521 (740)
.+++.|++.+.||+|+||.||+|.. .+++.||+|++...... ...+..|+.++.++ +|+|++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc----HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 3567888999999999999999965 46889999998654322 25677899999998 799999999998753
Q ss_pred ---CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEee
Q 004642 522 ---KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVAD 598 (740)
Q Consensus 522 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 598 (740)
...+++|||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++|+|
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 46899999999999999987633 23588999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCcccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhh
Q 004642 599 FGTARLLHVDSSYRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLID 673 (740)
Q Consensus 599 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 673 (740)
||++..............|+..|+|||++. +..++.++||||+||++|||++|+.||....... ....
T Consensus 155 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-------~~~~ 227 (272)
T cd06637 155 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-------ALFL 227 (272)
T ss_pred CCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH-------HHHH
Confidence 999986543333334457899999999986 3457889999999999999999999986432110 0000
Q ss_pred hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 674 VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 674 ~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.............. ...+.+++.+||..+|.+||++.|++++
T Consensus 228 ~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 228 IPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HhcCCCCCCCCCCc---CHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00000000000111 1237899999999999999999999876
No 167
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.2e-37 Score=330.70 Aligned_cols=256 Identities=24% Similarity=0.361 Sum_probs=200.7
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++... +++.||+|++...........+.+.+|++++.+++||+|+++++.+.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999654 68999999997544333344567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999987643 578899999999999999999998 9999999999999999999999999998754211
Q ss_pred CC-----------------------------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCC
Q 004642 609 SS-----------------------------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTH 653 (740)
Q Consensus 609 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~ 653 (740)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 0112469999999999999999999999999999999999999
Q ss_pred CCCcccccccCCCCCchhhhhhcc--cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCC---CHHHHHHHHHcC
Q 004642 654 PGGLLSSLSSSSGPKIMLIDVLNQ--RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP---TMQRISQELLAG 722 (740)
Q Consensus 654 p~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~ev~~~L~~~ 722 (740)
||..... ......+... .+..+..... ...+.+++.+|+. ||++|+ ++.|+++|-...
T Consensus 235 Pf~~~~~-------~~~~~~i~~~~~~~~~p~~~~~---s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~ 297 (360)
T cd05627 235 PFCSETP-------QETYRKVMNWKETLVFPPEVPI---SEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFE 297 (360)
T ss_pred CCCCCCH-------HHHHHHHHcCCCceecCCCCCC---CHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCC
Confidence 9864321 1111122211 1111111001 1236678887764 999998 478888886543
No 168
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4e-36 Score=312.21 Aligned_cols=257 Identities=25% Similarity=0.418 Sum_probs=202.0
Q ss_pred hcccccceeeecccceEEEEEEe-CCCc----EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGK----VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
.++|++.+.||+|+||.||+|.+ .+|+ .||+|++...... ...+.+.+|+.+++.++||||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP--KANKEILDEAYVMAGVGSPYVCRLLGICLTS-T 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCH--HHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence 45788899999999999999964 3454 4899998754332 2346788999999999999999999998764 4
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.++++||+++|+|.++++.... .+++.++..++.||+.||+|||+. +++||||||+||++++++.+||+|||+++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 7799999999999999876432 588999999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 604 LLHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 604 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
......... ....++..|+|||...+..++.++|||||||++|||++ |..||+.... ......+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~ 229 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--------REIPDLLEKGER 229 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCc
Confidence 765332221 12234678999999998889999999999999999998 8888764221 112222222221
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.+... .....+.+++.+||+.||++||++.|+++.|.....
T Consensus 230 ~~~~~---~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 230 LPQPP---ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11111 112237889999999999999999999999876643
No 169
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-36 Score=316.27 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=204.0
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..+|++.+.||+|+||.||+|.. .+++.||+|.+....... .+.+.+|+.+++.++|+|++++++++..+...++|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch---HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 35788999999999999999964 568999999987644332 36688999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred ecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999988643 478899999999999999999998 999999999999999999999999999876544
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhh-cccCCCcchhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVL-NQRLSPPVNQK 686 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 686 (740)
.........|++.|+|||.+.+..++.++|||||||++|+|++|+.||...... ....... ..........
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~- 240 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGTPELQNPE- 240 (296)
T ss_pred cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-------HhHHHHhcCCCCCCCCcc-
Confidence 333333457889999999998888899999999999999999999998643210 0111111 1111101111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.+++.+||..+|++||++.|++++-..
T Consensus 241 --~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~ 273 (296)
T cd06654 241 --KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273 (296)
T ss_pred --ccCHHHHHHHHHHCcCCcccCcCHHHHhhChhh
Confidence 112237889999999999999999999997544
No 170
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-36 Score=313.44 Aligned_cols=254 Identities=28% Similarity=0.413 Sum_probs=199.5
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|.+.+.||+|+||.||+|.. .+++.||+|.++..... ....+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE---DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 35788889999999999999954 46899999998754322 235678899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++...+ .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 85 MEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred EeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 99999999999886543 588999999999999999999998 999999999999999999999999999976643
Q ss_pred CCCcccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 608 DSSYRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
.........|+..|+|||++. ...++.++||||+||++|+|++|+.||...... ............++..
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~ 231 (267)
T cd06645 159 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-------RALFLMTKSNFQPPKL 231 (267)
T ss_pred cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-------hhHHhhhccCCCCCcc
Confidence 333334457899999999874 445788999999999999999999997532210 0000111111111110
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.........+.+++.+|++.+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0000111237889999999999999999999875
No 171
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.9e-36 Score=310.45 Aligned_cols=255 Identities=24% Similarity=0.416 Sum_probs=199.9
Q ss_pred cccceeeecccceEEEEEEeCC----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe----
Q 004642 452 FHIKYCIGTGGYGSVYKAELPE----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC---- 523 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 523 (740)
|.+.+.||+|+||.||+|.... +..||+|+++..... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 5678899999999999996542 377999998764333 2335678999999999999999999998876554
Q ss_pred --EEEEEEeccCCCchhhhcCCC---ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEee
Q 004642 524 --MFLIYEYMERGSLFCVLHDDD---EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVAD 598 (740)
Q Consensus 524 --~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 598 (740)
.++++||+++|+|..++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 799999999999998885432 223689999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhh
Q 004642 599 FGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVL 675 (740)
Q Consensus 599 fG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 675 (740)
||+++........ .....++..|+|||++.+..++.++|||||||++|||++ |..||..... .. ..+.+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-------~~-~~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-------HE-IYDYL 228 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-------HH-HHHHH
Confidence 9999876433222 122235678999999988889999999999999999999 8888764321 11 11222
Q ss_pred cccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 676 NQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 676 ~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
........+. .....+.+++.+||+.||++||++.|+++.|..
T Consensus 229 ~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 229 RHGNRLKQPE---DCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HcCCCCCCCc---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 2111111111 122348899999999999999999999999875
No 172
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.6e-36 Score=305.77 Aligned_cols=246 Identities=24% Similarity=0.409 Sum_probs=197.0
Q ss_pred eeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 457 CIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
.||+|+||.||+|...+++.+|+|.+...... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQ--ELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCH--HHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 58999999999998888999999998765432 2335688999999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc-cccc
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY-RTLR 615 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~ 615 (740)
.+++..... .+++..+..++.|++.||.|+|+. +++||||||+||+++.++.++|+|||++......... ....
T Consensus 80 ~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 80 LSFLRKKKD--ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 998865432 578999999999999999999998 9999999999999999999999999999754322111 1122
Q ss_pred ccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHH
Q 004642 616 AGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILV 694 (740)
Q Consensus 616 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 694 (740)
.++..|+|||+..+..++.++||||||+++|++++ |..||...... .....+.......... .....+
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~ 223 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYRMSCPQ---KCPDDV 223 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCCCCCCC---CCCHHH
Confidence 44678999999998889999999999999999998 99998643211 1111111111111111 112348
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 695 STIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 695 ~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.+++.+|++.+|++||++.|++++|.
T Consensus 224 ~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 224 YKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHhc
Confidence 89999999999999999999999874
No 173
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5e-36 Score=310.23 Aligned_cols=255 Identities=27% Similarity=0.405 Sum_probs=196.2
Q ss_pred cccceeeecccceEEEEEEeCC-Cc--EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec------C
Q 004642 452 FHIKYCIGTGGYGSVYKAELPE-GK--VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK------K 522 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 522 (740)
|.+.+.||+|+||.||+|...+ +. .||+|.++..... ....+.+.+|+++++.++|+||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT-RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3467889999999999997654 32 5899988764332 23357888999999999999999999987532 2
Q ss_pred eEEEEEEeccCCCchhhhcCC---CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 523 CMFLIYEYMERGSLFCVLHDD---DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
..+++|||+++|+|.+++... .....+++..+..++.|++.||+|||++ +|+||||||+||++++++.++|+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 468999999999998877422 1223588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhc
Q 004642 600 GTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLN 676 (740)
Q Consensus 600 G~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+++.+...... .....+++.|+|||+..+..++.++||||||+++|||++ |+.||..... ....+.+.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~ 228 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--------SEIYDYLR 228 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHH
Confidence 999876433221 122346778999999999899999999999999999999 7888764221 11111111
Q ss_pred ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 677 QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 677 ~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
......... .....+.+++.+||+.+|++||++.|++++|..
T Consensus 229 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 229 QGNRLKQPP---DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred cCCCCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 111111111 112237899999999999999999999999875
No 174
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.8e-36 Score=314.90 Aligned_cols=260 Identities=23% Similarity=0.335 Sum_probs=203.7
Q ss_pred HhcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK 521 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (740)
..++|++.+.||+|+||.||+|..+ .+..||+|.+...... .....+.+|+.++++++||||+++++++.++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL--RERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4578999999999999999998543 2457999988654322 2235678899999999999999999999999
Q ss_pred CeEEEEEEeccCCCchhhhcCCCc-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcE
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDE-------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEA 594 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 594 (740)
+..++||||+++|+|.+++..... ....++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 999999999999999999965321 23457788999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchh
Q 004642 595 SVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIML 671 (740)
Q Consensus 595 kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 671 (740)
+|+|||+++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||..... ....
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-------~~~~ 231 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------EQVL 231 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHH
Confidence 99999999865432221 122245678999999998889999999999999999999 7888754221 1111
Q ss_pred hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 672 IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 672 ~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
....+..... ... .....+.+++.+|++.+|++||++.|+++.+...-
T Consensus 232 ~~~~~~~~~~-~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 232 KFVMDGGYLD-QPD---NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHcCCCCC-CCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1222221111 111 11234889999999999999999999999998753
No 175
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2e-36 Score=333.20 Aligned_cols=261 Identities=20% Similarity=0.274 Sum_probs=191.6
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec------
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK------ 521 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 521 (740)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 46799999999999999999965 468999999885432 2235799999999999999999887532
Q ss_pred --CeEEEEEEeccCCCchhhhcCC-CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-cEEEe
Q 004642 522 --KCMFLIYEYMERGSLFCVLHDD-DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-EASVA 597 (740)
Q Consensus 522 --~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~ 597 (740)
...++||||+++ ++.+++... .....+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246799999986 666665432 1233688999999999999999999998 999999999999999665 69999
Q ss_pred ecccceecccCCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCc
Q 004642 598 DFGTARLLHVDSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKI 669 (740)
Q Consensus 598 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~ 669 (740)
|||+|+.+..... .....||+.|+|||++.+. .++.++||||+||++|||++|..||........ ...+..
T Consensus 214 DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 214 DFGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 9999987643322 2234689999999998764 689999999999999999999999875321100 000000
Q ss_pred hhhhhhcc-----cCCCcchhhh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 670 MLIDVLNQ-----RLSPPVNQKI-----VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 670 ~~~~~~~~-----~l~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.......+ ..+....... ......+.+++.+||+.||.+|||+.|+++|-..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f 354 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF 354 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhH
Confidence 00000000 0000000000 0012347899999999999999999999988764
No 176
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.9e-36 Score=309.45 Aligned_cols=254 Identities=28% Similarity=0.437 Sum_probs=201.7
Q ss_pred cccccceeeecccceEEEEEEeC----CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP----EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|... .+..+|+|.+...... ...+.+.+|+.++.+++||||+++++++.+++..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 57888999999999999999653 2347999998754322 23568899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+...
T Consensus 82 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 99999999999999976542 578999999999999999999998 9999999999999999999999999999876
Q ss_pred ccCCCcc---cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 606 HVDSSYR---TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 606 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
....... ....++..|+|||++.+..++.++||||||+++||+++ |+.||...... . ....+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-------~-~~~~~~~~~~~ 228 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-------D-VIKAIEEGYRL 228 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-------H-HHHHHhCCCcC
Confidence 5332211 11123568999999998889999999999999999886 99997643210 1 11111111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
+.... ....+.+++.+|++.+|++||++.++++.|..
T Consensus 229 ~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 229 PAPMD---CPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred CCCCC---CCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 11111 12237899999999999999999999999875
No 177
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.7e-36 Score=317.74 Aligned_cols=260 Identities=25% Similarity=0.365 Sum_probs=199.0
Q ss_pred hcccccceeeecccceEEEEEEeCC---------------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccce
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE---------------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVK 513 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 513 (740)
.++|++.+.||+|+||.||++...+ ...||+|++..... ......+.+|++++++++|+|+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--KTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCcCe
Confidence 3579999999999999999986532 23589999976433 233467899999999999999999
Q ss_pred eeeeeeecCeEEEEEEeccCCCchhhhcCCC---------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 004642 514 LYGFCLHKKCMFLIYEYMERGSLFCVLHDDD---------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSN 584 (740)
Q Consensus 514 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~ 584 (740)
+++++...+..++||||+++++|.+++.... ....+++.+++.++.|++.||+|||+. +++|+||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 9999999999999999999999999886432 112478999999999999999999998 9999999999
Q ss_pred ceEEcCCCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh--CCCCCCcccc
Q 004642 585 NILLDSNLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM--GTHPGGLLSS 660 (740)
Q Consensus 585 NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~~ 660 (740)
||+++.++.+||+|||++......... .....++..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 999999999999999999765432211 122345778999999988889999999999999999998 5567654221
Q ss_pred cccCCCCCchhhhhhc---ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 661 LSSSSGPKIMLIDVLN---QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
... .....+... ......... .....+.+++.+||+.+|++||++.++++.|.
T Consensus 239 ~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 EQV----IENTGEFFRNQGRQIYLSQTP---LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHH----HHHHHHhhhhccccccCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 000 000000000 000011011 11123889999999999999999999999885
No 178
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-36 Score=324.08 Aligned_cols=260 Identities=23% Similarity=0.324 Sum_probs=201.1
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+++.. +++.||+|++.............+.+|..++..++|++|+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999654 67889999987543333333466888999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....+
T Consensus 81 Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999976432 578889999999999999999998 9999999999999999999999999999876543
Q ss_pred CCc-ccccccCCCccccccccc-----cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 609 SSY-RTLRAGTYGYIAPELAYT-----IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.......+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~~ 228 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-------VETYGKIMNHEERFQ 228 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-------HHHHHHHHcCCCccc
Confidence 322 223469999999999875 4578899999999999999999999864321 111112222111111
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHHHc
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKS--RPTMQRISQELLA 721 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~L~~ 721 (740)
.+.........+.+++.+|+..++++ |+++++++++...
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f 269 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFF 269 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCc
Confidence 11111111234778999998876654 4689999887543
No 179
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.3e-36 Score=312.50 Aligned_cols=256 Identities=24% Similarity=0.345 Sum_probs=202.8
Q ss_pred hcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
.++|++.+.||+|+||.||+|... .+..||+|.+...... .....+.+|+++++.++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM--RERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH--HHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 467889999999999999999653 2468999998654322 22467889999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCCc-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEE
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDE-------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEAS 595 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 595 (740)
..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 99999999999999999865321 22478999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhh
Q 004642 596 VADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLI 672 (740)
Q Consensus 596 l~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 672 (740)
|+|||+++........ .....++..|+|||.+.+..++.++|||||||++||+++ |..||..... .. ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-------~~-~~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-------EE-VL 231 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH-------HH-HH
Confidence 9999999765433221 223356789999999988889999999999999999998 8888754221 11 11
Q ss_pred hhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 673 DVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 673 ~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
+.+........+... ...+.+++.+||+.+|++|||+.|+++.|.
T Consensus 232 ~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 232 KFVIDGGHLDLPENC---PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHhcCCCCCCCCCC---CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111111111111 234889999999999999999999999875
No 180
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.4e-36 Score=323.62 Aligned_cols=259 Identities=25% Similarity=0.327 Sum_probs=199.5
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++..+ +++.||+|++...........+.+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999665 57889999986543333333456888999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++|+|.+++.+... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999976432 578899999999999999999998 9999999999999999999999999999765433
Q ss_pred CCc-ccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 609 SSY-RTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~~ 228 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-------VETYGKIMNHKERFQ 228 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-------HHHHHHHhCCCcccc
Confidence 222 23357999999999986 34578899999999999999999999864321 111112222111111
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHHH
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKS--RPTMQRISQELL 720 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~L~ 720 (740)
.+.........+.+++.+|+..+|++ |++++|++++-.
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~ 268 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF 268 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence 11111111233778888888655544 689999998854
No 181
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=6.4e-36 Score=306.52 Aligned_cols=250 Identities=26% Similarity=0.447 Sum_probs=203.6
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|++.+.||+|+||.||+|.. .|+.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 35788899999999999999986 488999999976543 3477889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999876443 2589999999999999999999998 9999999999999999999999999999876322
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.. ...++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+............
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPHVEKGYRMEAPEGC 224 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHhcCCCCCCccCC
Confidence 11 2235678999999988889999999999999999997 9999764321 1111222111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
...+.+++.+||..+|++||++.|++++|..
T Consensus 225 ---~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 225 ---PPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ---CHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 2337899999999999999999999999864
No 182
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-36 Score=316.92 Aligned_cols=258 Identities=26% Similarity=0.405 Sum_probs=202.9
Q ss_pred hcccccceeeecccceEEEEEEeC--------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP--------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCL 519 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 519 (740)
.++|.+.+.||+|+||.||++... ++..+|+|.+...... .....+.+|+++++.+ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh--HHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 467999999999999999999642 2357999999764322 2246788899999999 7999999999999
Q ss_pred ecCeEEEEEEeccCCCchhhhcCCCc-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 004642 520 HKKCMFLIYEYMERGSLFCVLHDDDE-------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNI 586 (740)
Q Consensus 520 ~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 586 (740)
..+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999975421 12488999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecccceecccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCccccccc
Q 004642 587 LLDSNLEASVADFGTARLLHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSS 663 (740)
Q Consensus 587 ll~~~~~~kl~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~ 663 (740)
+++.++.++|+|||.++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--- 248 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--- 248 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH---
Confidence 99999999999999997654222111 11234568999999998889999999999999999998 8888753211
Q ss_pred CCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 664 SSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....+.+......+.... ....+.+++.+||+.+|++||++.|+++.|...
T Consensus 249 -----~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 249 -----EELFKLLKEGHRMDKPSN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred -----HHHHHHHHcCCCCCCCCc---CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 112222222222111111 123478899999999999999999999999764
No 183
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.1e-36 Score=307.25 Aligned_cols=248 Identities=24% Similarity=0.412 Sum_probs=198.3
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeee-ecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCL-HKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ 528 (740)
++|.+.+.||+|+||.||++.. .|+.||+|.+..... .+.+.+|+.++++++|+|++++++++. .++..+++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~-----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCch-----HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 4788899999999999999976 478899999865332 357889999999999999999999765 456789999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++..... ..+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999876432 2478999999999999999999998 9999999999999999999999999998765322
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.+..........
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRVEKGYKMDAPDGC 224 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCCCCCCCC
Confidence 1 22245678999999988889999999999999999998 9998764211 1111111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
...+.+++.+|++.+|++||++.+++++|..
T Consensus 225 ---~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 225 ---PPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred ---CHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2237899999999999999999999998864
No 184
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.7e-36 Score=316.16 Aligned_cols=264 Identities=24% Similarity=0.328 Sum_probs=204.2
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++... +|..||+|.+..... .....++.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK--PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36889999999999999999654 678899998875432 233567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++.... .+++..+..++.|++.||+|||+. .+++|+||||+||+++.++.++|+|||++......
T Consensus 79 ey~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 79 EHMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999997653 578899999999999999999973 18999999999999999999999999998765321
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccc------cCC--CCC------------
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS------SSS--GPK------------ 668 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~------~~~--~~~------------ 668 (740)
......|+..|+|||...+..++.++||||||+++|||++|+.||....... ... ...
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 2234478999999999988889999999999999999999999985322100 000 000
Q ss_pred -----chhhhhhcc---cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 669 -----IMLIDVLNQ---RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 669 -----~~~~~~~~~---~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
....+..+. ...+..+. ......+.+++.+||+.+|++||+++|++++......
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPS--GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcC--cccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 000000000 00000000 0012237899999999999999999999999876544
No 185
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.2e-36 Score=308.24 Aligned_cols=255 Identities=30% Similarity=0.452 Sum_probs=203.5
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||.||+|... +++.+++|.+...... ..+.+.+|++++++++||||+++++++...+..+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 367899999999999999999654 5788999999765432 347888999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 79 MEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999999887542 2588999999999999999999998 999999999999999999999999999976543
Q ss_pred CCCcccccccCCCcccccccccc---ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTI---VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
.........++..|+|||.+.+. .++.++||||||+++|||++|+.||...... ............+...
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~ 226 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM-------RALFLISKSNFPPPKL 226 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCCCccc
Confidence 32233344688899999998776 7888999999999999999999998643210 1111111111111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.........+.+++.+||+.+|++||++++++++
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111222348899999999999999999999864
No 186
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.3e-36 Score=307.52 Aligned_cols=254 Identities=27% Similarity=0.473 Sum_probs=205.1
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|.+.+.||+|+||.||+|..++++.||+|.+...... .+++.+|++++++++|+|++++++++......++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 4689999999999999999998888889999998764432 357889999999999999999999999989999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+.....+
T Consensus 81 e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 81 EYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred eccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999976432 3589999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCc-ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSY-RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
... .....++..|+|||.+.+..++.++||||+|+++||+++ |+.||..... ....+.+......+....
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--------REVLEQVERGYRMPRPPN 228 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC
Confidence 111 112234568999999998889999999999999999999 9999754221 111122222211111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
. ...+.+++.+|++.+|++||+++++.+.|+.
T Consensus 229 ~---~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 229 C---PEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred C---CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1 2237899999999999999999999988764
No 187
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.8e-36 Score=306.33 Aligned_cols=253 Identities=21% Similarity=0.347 Sum_probs=206.0
Q ss_pred ccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||.++ ..+++.+++|.+....... ...+.+.+|++++++++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 47889999999999999985 4468899999986544332 234678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999997643 23588999999999999999999998 99999999999999999999999999998765444
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.......|++.|+|||+..+..++.++||||||+++|||++|..||..... ......+......+.. . .
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~-~---~ 224 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-------LNLVVKIVQGNYTPVV-S---V 224 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCCCc-c---c
Confidence 333445789999999999888889999999999999999999999864221 1122222222222111 1 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
....+.+++.+||+.+|++||++.|+++++
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 122378899999999999999999999875
No 188
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.7e-36 Score=321.67 Aligned_cols=259 Identities=25% Similarity=0.374 Sum_probs=200.5
Q ss_pred hcccccceeeecccceEEEEEEe------CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeec
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL------PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHK 521 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 521 (740)
.++|++.+.||+|+||.||+|.. .+++.||||+++..... ...+.+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh--HHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 46899999999999999999953 35788999999764432 2246788999999999 689999999988654
Q ss_pred -CeEEEEEEeccCCCchhhhcCCCc-------------------------------------------------------
Q 004642 522 -KCMFLIYEYMERGSLFCVLHDDDE------------------------------------------------------- 545 (740)
Q Consensus 522 -~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 545 (740)
...+++|||+++|+|.++++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 467899999999999998864210
Q ss_pred ---------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc--ccc
Q 004642 546 ---------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY--RTL 614 (740)
Q Consensus 546 ---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~ 614 (740)
...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12368889999999999999999998 9999999999999999999999999999865432221 112
Q ss_pred cccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 615 RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 615 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
..++..|+|||.+.+..++.++||||||+++|||++ |..||..... .......+........+... ...
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~ 310 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLKEGTRMRAPDYT---TPE 310 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc-------cHHHHHHHhccCCCCCCCCC---CHH
Confidence 235678999999988889999999999999999997 8888754211 11112222221111111111 123
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 694 VSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+.+++.+||+.+|++||++.|++++|...
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 78999999999999999999999999764
No 189
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.3e-36 Score=315.35 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=203.1
Q ss_pred hcccccceeeecccceEEEEEEe--------CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL--------PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCL 519 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 519 (740)
.++|.+.+.||+|+||.||++.. .++..||+|.+...... ...+.+.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccch--HHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 56788999999999999999953 13457999998754322 2346788999999999 8999999999999
Q ss_pred ecCeEEEEEEeccCCCchhhhcCCCc-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 004642 520 HKKCMFLIYEYMERGSLFCVLHDDDE-------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNI 586 (740)
Q Consensus 520 ~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 586 (740)
..+..+++|||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999999875321 23578999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCccccccc
Q 004642 587 LLDSNLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSS 663 (740)
Q Consensus 587 ll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~ 663 (740)
+++.++.+||+|||.++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--- 245 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 245 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---
Confidence 9999999999999999876433222 122345678999999988889999999999999999998 7788753221
Q ss_pred CCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 664 SSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....+.+.......... .....+.+++.+||+.+|++||++.|+++.|...
T Consensus 246 -----~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 246 -----EELFKLLKEGHRMDKPA---NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred -----HHHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 11112222111111111 1123378899999999999999999999999654
No 190
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-36 Score=315.82 Aligned_cols=261 Identities=26% Similarity=0.327 Sum_probs=204.9
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||+||++... +|+.||+|++..... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc--chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 57888899999999999999654 688999998865432 234578899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++...+ .+++..+..++.+++.||.|||+. .+++||||||+||+++.++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 83 EFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred ecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999998887643 578999999999999999999973 18999999999999999999999999998654321
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCch----hhhhhcccCCCcch
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIM----LIDVLNQRLSPPVN 684 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~ 684 (740)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||............... ..............
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS 235 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc
Confidence 123346899999999998888999999999999999999999998753321111111111 11111111111100
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
......+.+++.+|++.||++||++.|++++....
T Consensus 236 ---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 236 ---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred ---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 11123478999999999999999999999986544
No 191
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.4e-36 Score=315.54 Aligned_cols=260 Identities=24% Similarity=0.385 Sum_probs=199.9
Q ss_pred hcccccceeeecccceEEEEEEeC-----------------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCcc
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-----------------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNI 511 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 511 (740)
.++|++.+.||+|+||.||++... ++..||+|++..... ....+.+.+|+++++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN--KNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCc
Confidence 357999999999999999998532 234689999875432 2335688999999999999999
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchhhhcCCCc--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDE--------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISS 583 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 583 (740)
+++++++..++..+++|||+++++|.+++..... ...+++.++..++.|++.|++|||+. +++|+||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp 158 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLAT 158 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCh
Confidence 9999999999999999999999999999875321 12478889999999999999999998 999999999
Q ss_pred CceEEcCCCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh--CCCCCCccc
Q 004642 584 NNILLDSNLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM--GTHPGGLLS 659 (740)
Q Consensus 584 ~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~ 659 (740)
+||+++.++.++|+|||+++.+...... .....++..|+|||...+..++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 9999999999999999999765432211 122234678999999888889999999999999999998 677875432
Q ss_pred ccccCCCCCchhhhhhc---ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 660 SLSSSSGPKIMLIDVLN---QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
..... ....+... .....+... .....+.+++.+||+.||++||++.|+.+.|.
T Consensus 239 ~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 239 DEQVI----ENTGEFFRDQGRQVYLPKPA---LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred hHHHH----HHHHHHHhhccccccCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11000 00001000 000001111 11234889999999999999999999999886
No 192
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.5e-36 Score=311.96 Aligned_cols=254 Identities=27% Similarity=0.464 Sum_probs=200.6
Q ss_pred cccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
.+|...+.||+|+||.||++... ++..+|+|.+..... ...+.+.+|++++++++|+||+++++++..++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---SARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH---HHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 46777889999999999999532 356789998865432 234678999999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCc------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 004642 524 MFLIYEYMERGSLFCVLHDDDE------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN 591 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 591 (740)
.+++|||+++++|.+++..... ...+++.++..++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 9999999999999999875431 12478999999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCC
Q 004642 592 LEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPK 668 (740)
Q Consensus 592 ~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~ 668 (740)
+.++|+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------- 230 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN-------- 230 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--------
Confidence 99999999999765432211 122345678999999998899999999999999999998 8999754221
Q ss_pred chhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 669 IMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 669 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
....+.............. ...+.+++.+||+.||++||++.|+.+.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 231 TEAIECITQGRELERPRTC---PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHcCccCCCCCCC---CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1111112121111111111 123789999999999999999999999885
No 193
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=7e-36 Score=306.36 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=201.7
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee-cCeEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH-KKCMFLIY 528 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 528 (740)
+|++.+.||+|++|.||++... +++.||+|++....... ...+.+.+|++++++++|+|++++++.+.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-RERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-HHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 4888999999999999999654 57889999987544332 234678899999999999999999998764 44689999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++..... ..+++.++..++.|++.|+++||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cccCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999999875332 2589999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........+++.|+|||+..+..++.++||||+|+++|+|++|+.||..... ...........+.. ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-------~~~~~~~~~~~~~~-~~~--- 224 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-------NSLVYRIIEGKLPP-MPK--- 224 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhcCCCC-Ccc---
Confidence 3333445688999999999998899999999999999999999999864211 11111222222211 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.....+.+++.+|++.+|++||++.+++++
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 122348899999999999999999999876
No 194
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.9e-36 Score=308.02 Aligned_cols=251 Identities=29% Similarity=0.443 Sum_probs=203.5
Q ss_pred hcccccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||.||+|...+ ++.|++|.+..... .+.+.+|++++++++||||+++++++.++...+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 3678899999999999999997664 78999999865432 47889999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+||+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 77 MEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred EecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999986533 2589999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.........|+..|+|||++.+..++.++||||||+++|+|++|+.||....... ..... ........ ...
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-------~~~~~-~~~~~~~~-~~~ 222 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-------AIFMI-PNKPPPTL-SDP 222 (256)
T ss_pred CccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-------hhhhh-ccCCCCCC-Cch
Confidence 3333344568899999999998889999999999999999999999987432210 00000 00000000 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
......+.+++.+||+.+|++||++.|++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1111237899999999999999999999875
No 195
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.5e-36 Score=310.33 Aligned_cols=256 Identities=31% Similarity=0.457 Sum_probs=207.7
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||.|+||.||+|... +++.||+|.+...... .....+.+|+++++.++|+|++++++++.++...++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE--DEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc--hHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 36888899999999999999654 6899999998754322 22467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||+++.....
T Consensus 79 e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 79 EYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred EeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 999999999998754 688999999999999999999998 9999999999999999999999999999887644
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........|+..|+|||++.+..++.++||||||+++|+|+||+.||..... .... ..+.....+.....
T Consensus 152 ~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-------~~~~-~~~~~~~~~~~~~~-- 221 (274)
T cd06609 152 MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-------MRVL-FLIPKNNPPSLEGN-- 221 (274)
T ss_pred ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-------HHHH-HHhhhcCCCCCccc--
Confidence 3333445688899999999988899999999999999999999999864321 1111 11111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.....+.+++.+||+.+|++||++++++++-...+.
T Consensus 222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 222 KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 012237889999999999999999999998766543
No 196
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-37 Score=317.18 Aligned_cols=259 Identities=22% Similarity=0.381 Sum_probs=206.7
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 527 (740)
...|++.++||+||.+.||++...+.+.||+|++..... +......|..|+..+.++ .|.+||++++|-..++..|||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~-D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEA-DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhc-CHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 457889999999999999999888888999998876543 445678999999999999 589999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||-+. +|..+|...... ...| .+..++.||+.|+.+.|++ ||||.||||.|+|+-. |.+||+|||+|..+..
T Consensus 439 mE~Gd~-DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 439 MECGDI-DLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred eecccc-cHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 998754 899999876543 3345 6788999999999999999 9999999999999854 6899999999998876
Q ss_pred CCC--cccccccCCCccccccccccc-----------cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhh
Q 004642 608 DSS--YRTLRAGTYGYIAPELAYTIV-----------VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDV 674 (740)
Q Consensus 608 ~~~--~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 674 (740)
+.. .....+||+.||+||.+.... ++.++||||+|||||+|+.|+.||+..... ...+..+
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~------~aKl~aI 585 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ------IAKLHAI 585 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH------HHHHHhh
Confidence 644 245568999999999886432 557899999999999999999999854311 1123334
Q ss_pred hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 675 LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 675 ~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.++.-..+++.... ..++.++++.||++||.+||+..|++++-.-.-
T Consensus 586 ~~P~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 586 TDPNHEIEFPDIPE--NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred cCCCccccccCCCC--chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 44433222222111 112789999999999999999999999876554
No 197
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.9e-36 Score=316.10 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=201.7
Q ss_pred hcccccceeeecccceEEEEEEeCC-----------------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCcc
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE-----------------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNI 511 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 511 (740)
.++|++.+.||+|+||.||++...+ +..||+|++...... ...+.+.+|++++++++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999986542 346899998765433 335788999999999999999
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchhhhcCCCc--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDE--------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISS 583 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 583 (740)
+++++++..++..+++|||+++++|.+++..... ...+++..+..++.|++.||+|||+. +++|+||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 9999999999999999999999999999876431 12589999999999999999999998 999999999
Q ss_pred CceEEcCCCcEEEeecccceecccCCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh--CCCCCCccc
Q 004642 584 NNILLDSNLEASVADFGTARLLHVDSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM--GTHPGGLLS 659 (740)
Q Consensus 584 ~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~ 659 (740)
+||+++.++.++|+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999986543221 1223356788999999988889999999999999999998 667765422
Q ss_pred ccccCCCCCchhhhhh------cccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 660 SLSSSSGPKIMLIDVL------NQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.. ..+.... ......+... .....+.+++.+|++.||++||++.|+++.|.
T Consensus 239 ~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 DQ-------QVIENAGHFFRDDGRQIYLPRPP---NCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred hH-------HHHHHHHhccccccccccCCCcc---CCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 10 0011110 0000001111 11134889999999999999999999999885
No 198
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7.7e-36 Score=306.64 Aligned_cols=249 Identities=29% Similarity=0.482 Sum_probs=201.7
Q ss_pred eeeecccceEEEEEEeCC----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEec
Q 004642 456 YCIGTGGYGSVYKAELPE----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYM 531 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 531 (740)
+.||+|+||.||+|.... +..|++|.+....... ..+.+.+|+++++.++|+|++++++++......+++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 368999999999996653 7889999998765443 3578899999999999999999999999999999999999
Q ss_pred cCCCchhhhcCCCc------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 532 ERGSLFCVLHDDDE------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 532 ~~g~L~~~l~~~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
++++|.+++..... ...+++.++..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccc
Confidence 99999999987521 24689999999999999999999998 9999999999999999999999999999876
Q ss_pred ccCC--CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 606 HVDS--SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 606 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
.... .......++..|+|||.+....++.++||||+|+++|||++ |..||..... ....+.+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~ 227 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRKGYRLP 227 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCC
Confidence 5432 12233457889999999988889999999999999999999 6999865321 11111111111111
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
..... ...+.+++.+||+.+|++||++.|++++|.
T Consensus 228 ~~~~~---~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KPEYC---PDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCccC---ChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11111 234889999999999999999999999873
No 199
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.9e-37 Score=325.85 Aligned_cols=247 Identities=24% Similarity=0.320 Sum_probs=191.2
Q ss_pred eecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc---CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 458 IGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV---RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
||+|+||+||+|+.. +|+.||+|++.............+..|..++.+. +||||+++++++.++...++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999654 6899999998654332222334455667776665 699999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.++|+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99998887543 588999999999999999999998 999999999999999999999999999976433333334
Q ss_pred ccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHH
Q 004642 614 LRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDII 692 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 692 (740)
...||..|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.......+.. .. ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~~-~~---~~ 223 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-------QQMYRNIAFGKVRFPKN-VL---SD 223 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-------HHHHHHHHcCCCCCCCc-cC---CH
Confidence 55799999999998754 478899999999999999999999864221 11112222111111111 01 12
Q ss_pred HHHHHHHHcccCCCCCCC----CHHHHHHHHHc
Q 004642 693 LVSTIAFACLSSQPKSRP----TMQRISQELLA 721 (740)
Q Consensus 693 ~l~~li~~cl~~dP~~RP----s~~ev~~~L~~ 721 (740)
.+.+++.+||+.||++|| ++.|++++-..
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~ 256 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFF 256 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccc
Confidence 367899999999999998 67777776543
No 200
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=9.9e-36 Score=307.35 Aligned_cols=255 Identities=30% Similarity=0.447 Sum_probs=201.9
Q ss_pred hcccccceeeecccceEEEEEEeC-CC---cEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EG---KVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (740)
.++|+..+.||+|+||.||+|... ++ ..+|+|++...... ...+.+..|++++.+++|||++++.+++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE--KQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH--HHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 357888899999999999999764 23 37999998754322 2346788999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 82 MIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcccee
Confidence 99999999999999987543 2588999999999999999999998 999999999999999999999999999986
Q ss_pred cccCCCcc---cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 605 LHVDSSYR---TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 605 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
........ .....+..|+|||++....++.++|||||||++|||++ |+.||..... .. ....+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-------~~-~~~~i~~~~~ 228 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-------HE-VMKAINDGFR 228 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-------HH-HHHHHhcCCC
Confidence 64322111 11123457999999988889999999999999999997 9999854321 11 1222222112
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.+... .....+.+++.+||+.+|++||++.++++.|.+
T Consensus 229 ~~~~~---~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 229 LPAPM---DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11111 112347899999999999999999999999875
No 201
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7e-36 Score=308.45 Aligned_cols=257 Identities=23% Similarity=0.378 Sum_probs=198.4
Q ss_pred HHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
.+++.+.....||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|++++++++|+||+++++++..++..+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR---YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH---HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 3455666677899999999999964 46788999988754432 2467889999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCcEEEeeccccee
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-NLEASVADFGTARL 604 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~DfG~a~~ 604 (740)
+++||+++++|.+++.........++..+..++.||+.|++|||+. +|+||||||+||+++. ++.++|+|||.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999997543322237888899999999999999998 9999999999999986 67899999999976
Q ss_pred cccCCCcccccccCCCccccccccccc--cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 605 LHVDSSYRTLRAGTYGYIAPELAYTIV--VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
............|+..|+|||++.+.. ++.++||||+|+++|+|++|+.||...... .............+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~ 232 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP------QAAMFKVGMFKIHPE 232 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh------hhhHhhhhhhccCCC
Confidence 643333333346889999999986543 778999999999999999999998642210 000000000011111
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.+.. ....+.+++.+||+.+|++||++.|++++
T Consensus 233 ~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 233 IPES---LSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCcc---cCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 1111 12237889999999999999999999876
No 202
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.4e-36 Score=307.75 Aligned_cols=252 Identities=22% Similarity=0.364 Sum_probs=203.4
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||++.. .+|+.||+|.+....... ...+++.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 478899999999999999954 468999999987543322 234678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 80 YCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999998875332 2578899999999999999999998 99999999999999999999999999998764433
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.......|+..|+|||+..+..++.++|||||||++|+|++|+.||..... ......++...... ... .
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-------~~~~~~~~~~~~~~-~~~---~ 224 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-------KNLVLKIIRGSYPP-VSS---H 224 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-------HHHHHHHhcCCCCC-Ccc---c
Confidence 333344688899999999988899999999999999999999999763211 11122222222111 111 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
....+.+++.+||+.+|++||++.|++++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 225 YSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 12237899999999999999999999986
No 203
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.3e-36 Score=323.98 Aligned_cols=263 Identities=21% Similarity=0.249 Sum_probs=198.1
Q ss_pred HhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec-----
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK----- 521 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (740)
..++|++.+.||+|+||.||++.. ..++.||+|++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-HHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 457899999999999999999954 468899999997644332 2346778899999999999999999988643
Q ss_pred -CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 522 -KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 522 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999976 56555542 478889999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCC-----
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGP----- 667 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~----- 667 (740)
+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99865432 222345789999999999998999999999999999999999999864321100 0000
Q ss_pred --CchhhhhhcccCC---------------CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 668 --KIMLIDVLNQRLS---------------PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 668 --~~~~~~~~~~~l~---------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
............. +............+.+++.+|++.||++|||+.|++++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~ 314 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI 314 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcch
Confidence 0000011110000 00000000112347899999999999999999999998533
No 204
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7e-36 Score=307.93 Aligned_cols=252 Identities=24% Similarity=0.423 Sum_probs=201.6
Q ss_pred ccccceeeecccceEEEEEEeCCCcEEEEEEccCCccc---chHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETE---DSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
+|.+.+.||+|+||+||+|...+|+.+|+|.+...... .....+.+.+|++++++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47888999999999999998788999999998754322 123346788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999996543 578899999999999999999998 999999999999999999999999999876432
Q ss_pred CC------CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcc-cCC
Q 004642 608 DS------SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQ-RLS 680 (740)
Q Consensus 608 ~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~l~ 680 (740)
.. .......|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ........ ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~ 227 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-------AMFYIGAHRGLM 227 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-------HHHHhhhccCCC
Confidence 11 11223468899999999998889999999999999999999999986432210 01111111 111
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
+...... ...+.+++.+||+.+|++||++.|++++
T Consensus 228 ~~~~~~~---~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 228 PRLPDSF---SAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCCCC---CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111111 2237889999999999999999999875
No 205
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.1e-35 Score=305.51 Aligned_cols=253 Identities=27% Similarity=0.443 Sum_probs=203.4
Q ss_pred hcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.++|++.+.||+|+||.||++...++..+|+|.+..... ..+.+.+|++++++++|+|++++++++.+ ...+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChh----HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 468899999999999999999887888899998875432 24678899999999999999999999887 7789999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 80 EFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EeCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999976432 3578999999999999999999998 9999999999999999999999999999765432
Q ss_pred CCc-ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 609 SSY-RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 609 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
... .....++..|+|||++....++.++|+|||||++|++++ |+.||..... ......+......+...
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~- 226 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRALERGYRMPRPE- 226 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHhCCCCCCCcc-
Confidence 211 122345678999999988889999999999999999999 8999864321 11112222222111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.+++.+|++.+|++||++.++.+.|..
T Consensus 227 --~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 227 --NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 112237899999999999999999999998864
No 206
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=9.2e-36 Score=315.41 Aligned_cols=256 Identities=25% Similarity=0.324 Sum_probs=206.0
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++..++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999654 58999999998765544345678899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987543 23688999999999999999999998 9999999999999999999999999998754321
Q ss_pred CC-----------------------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccc
Q 004642 609 SS-----------------------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLS 659 (740)
Q Consensus 609 ~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 659 (740)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 0112357889999999998889999999999999999999999986432
Q ss_pred ccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCC----HHHHHHHH
Q 004642 660 SLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT----MQRISQEL 719 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~ev~~~L 719 (740)
. .....+........+.... ....+.+++.+|++.||++||+ ++|++++-
T Consensus 237 ~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 237 R-------DETFSNILKKEVTFPGSPP---VSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred h-------HHHHHHHhcCCccCCCccc---cCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 1 1222333333322221111 2234889999999999999999 77777653
No 207
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1e-35 Score=304.99 Aligned_cols=250 Identities=26% Similarity=0.433 Sum_probs=200.7
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.+|++.+.||+|+||.||++.+.+++.+|+|.+...... ...+.+|++++++++|||++++++++......++|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 468888999999999999998777889999998754432 2568889999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++..... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 80 FMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 9999999999875432 578999999999999999999998 99999999999999999999999999997654322
Q ss_pred Cc-ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 610 SY-RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 610 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.. .....++.+|+|||++.+..++.++||||||+++|||++ |+.||..... ....+.+...........
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~- 225 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETINAGFRLYKPRL- 225 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHhCCCCCCCCCC-
Confidence 11 112235678999999998889999999999999999998 9999864221 111111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
....+.+++.+||+.+|++||++.|++++|
T Consensus 226 --~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 --ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 113388999999999999999999999987
No 208
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.8e-36 Score=323.19 Aligned_cols=263 Identities=21% Similarity=0.247 Sum_probs=198.1
Q ss_pred HhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec-----
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK----- 521 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (740)
..++|.+.+.||+|+||.||++.. ..++.||||++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc-hhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 457899999999999999999954 468899999997644322 2346778899999999999999999987643
Q ss_pred -CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 522 -KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 522 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999976 66666642 478889999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCC-----
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPK----- 668 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~----- 668 (740)
+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ .....
T Consensus 172 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 172 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred CccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99865432 222344789999999999999999999999999999999999999964321100 00000
Q ss_pred ---chhhhhhcccC---------------CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 669 ---IMLIDVLNQRL---------------SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 669 ---~~~~~~~~~~l---------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
........... .+............+.+++.+|++.||++|||+.|++++-..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~ 321 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 00000000000 000000000112347899999999999999999999998643
No 209
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.2e-36 Score=313.62 Aligned_cols=261 Identities=26% Similarity=0.326 Sum_probs=192.1
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc---CCCccceeeeeeee-----c
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV---RHRNIVKLYGFCLH-----K 521 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~ 521 (740)
+|++.+.||+|+||.||+|... +|+.||+|.+......+. ....+.+|+++++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDG-LPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCC-CchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 4888999999999999999654 689999999876432221 123455677766655 79999999998864 3
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
...+++|||+++ +|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 458999999985 88888765432 2589999999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCCchh-
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPKIML- 671 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~~~~- 671 (740)
++...... ......||..|+|||++.+..++.++||||+||++|||++|+.||........ ......+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 155 ARIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred cccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 98764322 22334689999999999988899999999999999999999999864321000 00000000
Q ss_pred -----hhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 672 -----IDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 672 -----~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.....+................+.+++.+|++.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000000011112337899999999999999999999876
No 210
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7e-36 Score=323.41 Aligned_cols=264 Identities=23% Similarity=0.264 Sum_probs=198.8
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-----eE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK-----CM 524 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 524 (740)
+|++.+.||+|+||.||++.. .+|+.||+|++...... ....+++.+|+++++.++||||+++++++..++ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN-LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccc-hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478889999999999999965 57899999998654322 223467889999999999999999999998776 78
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++||||+. ++|.+.+.... .+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 99999997 47777775433 588999999999999999999998 999999999999999999999999999986
Q ss_pred cccCCC-cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCc-----
Q 004642 605 LHVDSS-YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKI----- 669 (740)
Q Consensus 605 ~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~----- 669 (740)
...... ......++..|+|||++.+. .++.++||||+||++|||++|+.||........ ......
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 543222 22334678999999998874 478899999999999999999999875432100 000000
Q ss_pred --hhhhhh-cccCCCcchhh----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 670 --MLIDVL-NQRLSPPVNQK----IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 670 --~~~~~~-~~~l~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+ .....++.... .......+.+++.+|++.||++|||+.|++++-...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 292 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLD 292 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhC
Confidence 000001 00011100000 001123478999999999999999999999986543
No 211
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=9e-36 Score=309.22 Aligned_cols=257 Identities=28% Similarity=0.421 Sum_probs=207.6
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
..|+..+.||+|+||.||+|... +++.||+|.+...... ...+.+.+|++++++++||||+++++++.++...++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45777888999999999999654 5889999998754322 23468889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++... .+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 82 EYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred ecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999988643 478889999999999999999998 9999999999999999999999999999776543
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........++..|+|||++.+..++.++|||||||++|||++|+.||...... . ..........+....
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-------~-~~~~~~~~~~~~~~~--- 223 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-------R-VLFLIPKNNPPTLTG--- 223 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-------h-HhhhhhcCCCCCCch---
Confidence 33334456888999999998888999999999999999999999998643221 0 011111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPM 726 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 726 (740)
.....+.+++.+||+.+|++||++.+++++-.......
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 12234789999999999999999999999977655444
No 212
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.8e-36 Score=310.58 Aligned_cols=256 Identities=24% Similarity=0.332 Sum_probs=201.9
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|++.+.||+|+||.||+|... ++..+++|.+..... ...+.+.+|+++++.++|||++++++++..++..++|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH---HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 4677888999999999999654 577889998865432 234678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|..++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 83 FCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred ecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 999999988876533 2589999999999999999999998 99999999999999999999999999997654333
Q ss_pred CcccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccC-CCcc
Q 004642 610 SYRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRL-SPPV 683 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~ 683 (740)
.......++..|+|||++. +..++.++||||+||++|||++|+.||..... ............ ....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 230 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSEPPTLAQ 230 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-------HHHHHHHhhcCCCCCCC
Confidence 3334456899999999874 34577899999999999999999999864321 111111111110 0011
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
+.... ..+.+++.+||+.+|++||++.+++++......
T Consensus 231 ~~~~~---~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 231 PSRWS---SEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ccccC---HHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 11111 237899999999999999999999998876543
No 213
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.2e-36 Score=313.03 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=205.5
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..+|++.+.||+|+||.||++.. .+++.||+|.+....... .+.+.+|+.+++.++|+|++++++++..++..++|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 46899999999999999999964 579999999987544332 35678899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++.+. .+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.+.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred ecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999988643 478899999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhh-cccCCCcchhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVL-NQRLSPPVNQK 686 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 686 (740)
.........+++.|+|||...+..++.++|||||||++|+|++|+.||....... ...... ..........
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~- 239 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTPELQNPE- 239 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-------heeeeccCCCCCCCCcc-
Confidence 4333344578899999999998889999999999999999999999986432110 000000 0100100111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+++.+||+.+|++||++++++++-...
T Consensus 240 --~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (297)
T cd06656 240 --RLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273 (297)
T ss_pred --ccCHHHHHHHHHHccCChhhCcCHHHHhcCchhc
Confidence 1122377899999999999999999999976654
No 214
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.5e-36 Score=311.48 Aligned_cols=253 Identities=30% Similarity=0.439 Sum_probs=202.8
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+.|+..+.||+|+||.||+|.. .+++.||+|.+...... ...+.+.+|++++++++||||+++++++..+...++||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch--HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 3466678899999999999954 45788999988754322 23467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 82 EYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence 999999999888642 578899999999999999999998 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........|+..|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+.....+....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-------~~~-~~~~~~~~~~~~~--- 223 (277)
T cd06642 155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-------RVL-FLIPKNSPPTLEG--- 223 (277)
T ss_pred chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-------hHH-hhhhcCCCCCCCc---
Confidence 33333346889999999999888999999999999999999999997643211 001 1111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+++.+||+.+|++||++.+++++....
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKHKFIT 257 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHH
Confidence 1122378999999999999999999999986543
No 215
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=319.43 Aligned_cols=254 Identities=26% Similarity=0.378 Sum_probs=205.4
Q ss_pred ccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|.-.+.||.|+||.||-+ +..+...||||++.-......+....+.+|+..+++++|||++.+-|+|......|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 3444566999999999999 455788999999987666666667889999999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
||-| +-.|++.-..+ ++-+.++..|..+.++||+|||+. +.||||||..|||+++.|.||++|||.|..+.+.
T Consensus 107 YClG-SAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHhc-cHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 9976 66666654333 577888999999999999999999 9999999999999999999999999999876543
Q ss_pred CcccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 610 SYRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
+.++|||+|||||++. .+.|+.|+||||+|++..|+.-.++|.--+.. -..++.+.....+......
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-------MSALYHIAQNesPtLqs~e 249 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNESPTLQSNE 249 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-------HHHHHHHHhcCCCCCCCch
Confidence 4568999999999875 57899999999999999999999998322111 1112233322222222333
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
|.. .+.+|+..|++.-|.+|||.+++++|-.-...
T Consensus 250 WS~---~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 250 WSD---YFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred hHH---HHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 443 48999999999999999999999998765543
No 216
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.2e-36 Score=316.26 Aligned_cols=260 Identities=25% Similarity=0.410 Sum_probs=202.9
Q ss_pred hcccccceeeecccceEEEEEEeC--------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP--------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCL 519 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 519 (740)
.++|.+.+.||+|+||.||++... .+..+|+|.+...... .....+.+|+++++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD--KDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh--HHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 467889999999999999999642 2457899998754332 2346788999999999 6999999999999
Q ss_pred ecCeEEEEEEeccCCCchhhhcCCCc-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 004642 520 HKKCMFLIYEYMERGSLFCVLHDDDE-------------AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNI 586 (740)
Q Consensus 520 ~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 586 (740)
..+..+++|||+++|+|.+++..... ...+++.++..++.|++.||+|||++ +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 99999999999999999999865321 23588999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecccceecccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCccccccc
Q 004642 587 LLDSNLEASVADFGTARLLHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSS 663 (740)
Q Consensus 587 ll~~~~~~kl~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~ 663 (740)
++++++.+||+|||.++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--- 242 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--- 242 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---
Confidence 99999999999999998654322211 11234567999999988889999999999999999999 8888754221
Q ss_pred CCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 664 SSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
....+.+.......... .....+.+++.+||+.+|++||++.|+++.|.....
T Consensus 243 -----~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 243 -----EELFKLLREGHRMDKPS---NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred -----HHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11112221111111111 112237789999999999999999999999987543
No 217
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=9.2e-36 Score=311.02 Aligned_cols=257 Identities=28% Similarity=0.460 Sum_probs=202.4
Q ss_pred hcccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
.++|++.+.||+|+||.||+|... ++..||+|++..... ....+.+.+|++++++++||||+++++++..++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 467889999999999999999753 467899999875433 233467889999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCC-------------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 004642 523 CMFLIYEYMERGSLFCVLHDDD-------------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISS 583 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp 583 (740)
..+++|||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9999999999999999986421 123478899999999999999999998 999999999
Q ss_pred CceEEcCCCcEEEeecccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccc
Q 004642 584 NNILLDSNLEASVADFGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSS 660 (740)
Q Consensus 584 ~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~ 660 (740)
+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999998765332211 112234678999999988889999999999999999998 8888753221
Q ss_pred cccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 661 LSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
........+..... ... .....+.+++.+|++.+|++||++.|+++.|+.
T Consensus 239 -------~~~~~~~~~~~~~~-~~~---~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 -------EEVIYYVRDGNVLS-CPD---NCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -------HHHHHHHhcCCCCC-CCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111111111111 011 112348899999999999999999999998863
No 218
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.3e-35 Score=306.35 Aligned_cols=251 Identities=27% Similarity=0.436 Sum_probs=200.6
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccc------hHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETED------SAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
+|.+.+.||+|+||.||+|.. .+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477888999999999999954 468899999887543322 2234678899999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.+++|||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997643 578889999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCC------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcc
Q 004642 604 LLHVDSS------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQ 677 (740)
Q Consensus 604 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
....... ......|+..|+|||.+.+..++.++||||+||++|+|++|+.||...... ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~- 226 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-------QAIFKIGE- 226 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-------HHHHHHhc-
Confidence 7653211 112235788999999999888999999999999999999999998743211 11111111
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 678 RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 678 ~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+...... ...+.+++.+||+.||++||++.|++++
T Consensus 227 ~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 227 NASPEIPSNI---SSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred cCCCcCCccc---CHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1111111111 2237889999999999999999999875
No 219
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.7e-35 Score=303.63 Aligned_cols=247 Identities=28% Similarity=0.430 Sum_probs=195.9
Q ss_pred eeeecccceEEEEEEeCC----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEec
Q 004642 456 YCIGTGGYGSVYKAELPE----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYM 531 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 531 (740)
+.||+|+||.||+|.... +..+|+|.+...... ...+++.+|++++++++|+|++++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 369999999999995422 368999999865543 23467889999999999999999999876 45689999999
Q ss_pred cCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc
Q 004642 532 ERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY 611 (740)
Q Consensus 532 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 611 (740)
++|+|.+++.... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++........
T Consensus 78 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 78 PLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999997654 578999999999999999999998 9999999999999999999999999999876443322
Q ss_pred ccc---cccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 612 RTL---RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 612 ~~~---~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
... ..++..|+|||...+..++.++||||||+++|||++ |+.||..... ......+......+...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~-- 221 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------AEVIAMLESGERLPRPE-- 221 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCCcCCCCC--
Confidence 111 123467999999998889999999999999999998 9999864321 11112221211111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+++.+||..+|++||++.++.+.|...
T Consensus 222 -~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 222 -ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred -CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1123478999999999999999999999999865
No 220
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.5e-36 Score=312.63 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=205.3
Q ss_pred cccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.+|++.+.||.|+||.||+|. ..+|+.|++|.+...... ..+.+.+|+++++.++|||++++++++...+..++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP---KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc---hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 468999999999999999995 457899999998654332 2367789999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 96 EYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 999999999988643 478999999999999999999998 9999999999999999999999999998876544
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........|+..|+|||.+.+..++.++|||||||++|+|++|+.||...... ............. . ....
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~-------~~~~~~~~~~~~~-~-~~~~ 239 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-------RALYLIATNGTPE-L-QNPE 239 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcCCcc-c-CCcc
Confidence 33334456889999999999888999999999999999999999998653221 0111111111000 0 0001
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+++.+||..||++||++.+++++-...
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~ 273 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 1122377899999999999999999999887654
No 221
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-35 Score=309.79 Aligned_cols=262 Identities=24% Similarity=0.371 Sum_probs=201.3
Q ss_pred cccccceeeecccceEEEEEEe-----CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--C
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-----PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--K 522 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 522 (740)
..|++.+.||+|+||.||.+.. .+++.||+|.++.... ....+.+.+|++++++++|||++++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 3578889999999999999963 3578899999875432 23346789999999999999999999998875 5
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..++||||+++++|.+++..... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 68999999999999999865432 579999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCCc---ccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccc-cc---CCCCC---chhh
Q 004642 603 RLLHVDSSY---RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSL-SS---SSGPK---IMLI 672 (740)
Q Consensus 603 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~-~~---~~~~~---~~~~ 672 (740)
+........ .....++..|+|||+..+..++.++|||||||++|||++++.|+...... .. ..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876433221 12335677899999998888999999999999999999988764321110 00 00000 1111
Q ss_pred hhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 673 DVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 673 ~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
+.+......+... .....+.+++.+||+.+|++||++.++++.+..
T Consensus 237 ~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 237 RVLEEGKRLPRPP---NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HHHHcCccCCCCC---CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 1111111111111 122348899999999999999999999999875
No 222
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.9e-36 Score=343.70 Aligned_cols=261 Identities=21% Similarity=0.332 Sum_probs=200.3
Q ss_pred HHhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cCe
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KKC 523 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 523 (740)
...++|.+.+.||+|+||.||++... ++..||+|.+....... .....+..|+.++++++|||||++++++.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-REKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-HHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 34578999999999999999999654 57789999887544332 335678899999999999999999998864 457
Q ss_pred EEEEEEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCC----CCeEecCCCCCceEEcC--------
Q 004642 524 MFLIYEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCT----LSIIHRDISSNNILLDS-------- 590 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~----~~ivH~dlkp~NIll~~-------- 590 (740)
+++||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+... .+|+||||||+|||++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 899999999999999987532 22368999999999999999999998521 25999999999999964
Q ss_pred ---------CCcEEEeecccceecccCCCcccccccCCCccccccccc--cccCCcchhHhHHHHHHHHHhCCCCCCccc
Q 004642 591 ---------NLEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYT--IVVTGKCDVYSFGVVALEVLMGTHPGGLLS 659 (740)
Q Consensus 591 ---------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~ 659 (740)
.+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 2348999999998764332 2234479999999999864 457889999999999999999999986422
Q ss_pred ccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 660 SLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.. ..+...+......+.. .....+.+||..||+.+|++||++.|++++-.
T Consensus 248 ~~-------~qli~~lk~~p~lpi~----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 248 NF-------SQLISELKRGPDLPIK----GKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred cH-------HHHHHHHhcCCCCCcC----CCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 11 1111222221111111 11223789999999999999999999996543
No 223
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4e-36 Score=313.44 Aligned_cols=265 Identities=25% Similarity=0.403 Sum_probs=203.3
Q ss_pred ccHHHHHHHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeee
Q 004642 440 ILYEDLINATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGF 517 (740)
Q Consensus 440 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 517 (740)
+.++.+..+.++|++.+.||+|+||.||++.. .+++.+|+|++...... ...+.+|+.+++++ +||||++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI----DEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccch----HHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 34456666789999999999999999999955 46889999987653221 25677899999999 69999999998
Q ss_pred ee-----ecCeEEEEEEeccCCCchhhhcCC-CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 004642 518 CL-----HKKCMFLIYEYMERGSLFCVLHDD-DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN 591 (740)
Q Consensus 518 ~~-----~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 591 (740)
+. .++..++||||+++++|.++++.. .....+++..+..++.|++.||.|||+. +++||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 84 345789999999999999887632 1223578899999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCCCcccccccCCCccccccccc-----cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCC
Q 004642 592 LEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYT-----IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSG 666 (740)
Q Consensus 592 ~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~ 666 (740)
+.++|+|||+++.............|+..|+|||++.. ..++.++||||+||++|||++|+.||.......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~---- 236 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR---- 236 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH----
Confidence 99999999999876543333334468999999998753 447889999999999999999999986432110
Q ss_pred CCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 667 PKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 667 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
...... ....+.... .......+.+++.+||+.||++||++.|+++++.
T Consensus 237 ---~~~~~~-~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 237 ---ALFKIP-RNPPPTLHQ-PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred ---HHhhcc-ccCCCcccC-CCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 011110 010000000 0001123789999999999999999999998763
No 224
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-35 Score=304.93 Aligned_cols=248 Identities=25% Similarity=0.401 Sum_probs=197.7
Q ss_pred eeeecccceEEEEEEeCC--C--cEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEec
Q 004642 456 YCIGTGGYGSVYKAELPE--G--KVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYM 531 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 531 (740)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.+.+|++++++++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 358999999999996543 3 36899999876553 446789999999999999999999999988 8899999999
Q ss_pred cCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc
Q 004642 532 ERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY 611 (740)
Q Consensus 532 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 611 (740)
++++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999976543 3689999999999999999999998 9999999999999999999999999999876542221
Q ss_pred ---ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 612 ---RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 612 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .................
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~-- 224 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-------QILKKIDKEGERLERPE-- 224 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHhcCCcCCCCc--
Confidence 122356789999999998889999999999999999998 99998643211 11111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.....+.+++.+|++.+|++||++.|+++.|.
T Consensus 225 -~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 -ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11223889999999999999999999999875
No 225
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.5e-35 Score=313.82 Aligned_cols=194 Identities=25% Similarity=0.406 Sum_probs=159.0
Q ss_pred ceeeecccceEEEEEEeC---CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEE
Q 004642 455 KYCIGTGGYGSVYKAELP---EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KKCMFLIYE 529 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 529 (740)
.++||+|+||.||+|... +++.||+|.+...... ..+.+|++++++++||||+++++++.. +...+++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc-----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 357999999999999754 4678999998754332 456789999999999999999998864 456899999
Q ss_pred eccCCCchhhhcCCC------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE----cCCCcEEEeec
Q 004642 530 YMERGSLFCVLHDDD------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILL----DSNLEASVADF 599 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Df 599 (740)
|+.+ +|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9865 7777664321 223588999999999999999999998 99999999999999 45678999999
Q ss_pred ccceecccCCC---cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCc
Q 004642 600 GTARLLHVDSS---YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGL 657 (740)
Q Consensus 600 G~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~ 657 (740)
|+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99987643221 12335789999999998764 578899999999999999999999864
No 226
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.7e-36 Score=326.55 Aligned_cols=258 Identities=21% Similarity=0.260 Sum_probs=195.0
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
...|.+.+.||+|+||.||++... .++.||||.... ..+.+|++++++++|+|||++++++..++..++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 457999999999999999999654 578899996432 3456899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
||++. ++|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 239 ~e~~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 99995 688887764332 589999999999999999999998 999999999999999999999999999987543
Q ss_pred CCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccC------
Q 004642 608 DSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRL------ 679 (740)
Q Consensus 608 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l------ 679 (740)
... ......||..|+|||++.+..++.++|||||||++|||++|..|+-..............+..++.+..
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 221 122346999999999999999999999999999999999988653211110000001111111111100
Q ss_pred --------------------CCcch-hhhH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 680 --------------------SPPVN-QKIV---QDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 680 --------------------~~~~~-~~~~---~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.+... ..+. .....+.+++.+||+.||++|||+.|++++-..
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f 458 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF 458 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCccc
Confidence 00000 0000 111237789999999999999999999998544
No 227
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.5e-35 Score=310.02 Aligned_cols=257 Identities=24% Similarity=0.360 Sum_probs=203.1
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.+.|++.+.||+|+||.||+|... +++.|++|.+.... ....+.+.+|+++++.++|||++++++++..++..++|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 367889999999999999999664 58899999986543 23357788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|..++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.....
T Consensus 88 ~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 88 IEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 999999999887764332 588999999999999999999998 999999999999999999999999999876433
Q ss_pred CCCcccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC-
Q 004642 608 DSSYRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP- 681 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~- 681 (740)
.........++..|+|||++. ...++.++|||||||++|||++|+.||..... ............+.
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~ 235 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSEPPTL 235 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-------HHHHHHHhcCCCccC
Confidence 323333456889999999985 34467799999999999999999999864321 11111111111110
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.... .....+.+++.+||+.+|++||+++|++++-....
T Consensus 236 ~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 236 SQPS---KWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred CCCc---ccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0011 11223788999999999999999999998876554
No 228
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.3e-35 Score=306.63 Aligned_cols=255 Identities=28% Similarity=0.445 Sum_probs=201.0
Q ss_pred cccccceeeecccceEEEEEEeCC-C---cEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPE-G---KVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~-g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
.+|++.+.||+|+||.||+|.... + ..||+|.+..... ....++|..|++++++++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 457889999999999999996543 3 3699999875432 333578999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 99999999999999876432 578999999999999999999998 9999999999999999999999999998765
Q ss_pred ccCCCc---ccccc--cCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccC
Q 004642 606 HVDSSY---RTLRA--GTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRL 679 (740)
Q Consensus 606 ~~~~~~---~~~~~--gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l 679 (740)
...... ..... .+..|+|||++.+..++.++|||||||++|||++ |..||..... ....+.+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--------~~~~~~i~~~~ 228 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVINAIEQDY 228 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--------HHHHHHHHcCC
Confidence 432211 11111 2457999999998899999999999999999886 9999864321 11111221111
Q ss_pred CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 680 SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 680 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..+.... ....+.+++.+||+.+|++||++.++++.|...
T Consensus 229 ~~~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 RLPPPMD---CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCCccc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111 122378899999999999999999999988753
No 229
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2e-35 Score=304.78 Aligned_cols=253 Identities=24% Similarity=0.377 Sum_probs=196.9
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCccc--chHHHHHHHHHHHHHhccCCCccceeeeeeee--cCeE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETE--DSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KKCM 524 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 524 (740)
.+|++.+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|++++++++||||+++++++.+ .+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688899999999999999955 46899999988654322 22345678899999999999999999998875 4678
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 99999999999999987543 478899999999999999999998 999999999999999999999999999976
Q ss_pred cccCCC---cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDSS---YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
...... ......++..|+|||++.+..++.++||||+||++|||++|+.||..... .............+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-------~~~~~~~~~~~~~~ 228 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-------MAAIFKIATQPTNP 228 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch-------HHHHHHHhcCCCCC
Confidence 532111 11223588899999999988899999999999999999999999864321 11111111111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
...... ...+.+++ +||..+|++||+++|++++-
T Consensus 229 ~~~~~~---~~~~~~li-~~~~~~p~~Rp~~~eil~hp 262 (266)
T cd06651 229 QLPSHI---SEHARDFL-GCIFVEARHRPSAEELLRHP 262 (266)
T ss_pred CCchhc---CHHHHHHH-HHhcCChhhCcCHHHHhcCc
Confidence 111111 12255666 68889999999999998764
No 230
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.1e-35 Score=307.28 Aligned_cols=252 Identities=25% Similarity=0.334 Sum_probs=189.3
Q ss_pred eeecccceEEEEEEeCC---CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 457 CIGTGGYGSVYKAELPE---GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
.||+|+||.||+|...+ +..+|+|.+...... .....+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 58999999999996543 467999998765432 2235788899999999999999999999999999999999999
Q ss_pred CCchhhhcCCC--ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc
Q 004642 534 GSLFCVLHDDD--EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY 611 (740)
Q Consensus 534 g~L~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 611 (740)
|+|.++++... .....++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 99999987533 223467788889999999999999998 9999999999999999999999999999754322211
Q ss_pred --ccccccCCCcccccccccc-------ccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 612 --RTLRAGTYGYIAPELAYTI-------VVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 612 --~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||....... .............
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~ 230 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ------VLTYTVREQQLKL 230 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH------HHHHHhhcccCCC
Confidence 1234578889999988642 35779999999999999996 999986432110 0000011111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
..+.........+.+++..|| .+|++||+++||.+.|.
T Consensus 231 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 110000011223778999999 68999999999998874
No 231
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.4e-36 Score=313.36 Aligned_cols=265 Identities=20% Similarity=0.255 Sum_probs=199.9
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|.+.+.||+|+||.||+|... +++.||+|.+........ ...+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA--PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc--hhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 57899999999999999999654 688999999875433221 245678999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++ ++|.+++..... .+++..+..++.||+.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 84 EYLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9997 488888765432 478899999999999999999998 9999999999999999999999999999765433
Q ss_pred CCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhhhhhcc--
Q 004642 609 SSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLIDVLNQ-- 677 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~~~~~~-- 677 (740)
........+++.|+|||.+.+. .++.++|||||||++|||++|+.||........ ..............
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 3333334678999999988653 477899999999999999999999864321000 00000000000000
Q ss_pred ----cCC---Ccch-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 678 ----RLS---PPVN-QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 678 ----~l~---~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..+ .... .........+.+++.+|++.||++|||++|++++-...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 000 0000 00001112377899999999999999999999987654
No 232
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.9e-35 Score=305.56 Aligned_cols=248 Identities=29% Similarity=0.430 Sum_probs=191.9
Q ss_pred eeecccceEEEEEEeCC-Cc--EEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEecc
Q 004642 457 CIGTGGYGSVYKAELPE-GK--VVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
.||+|+||.||+|...+ |. .+++|.++..... ...+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCH--HHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999997643 43 4688888743322 2346788999999999 89999999999999999999999999
Q ss_pred CCCchhhhcCCC-------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 533 RGSLFCVLHDDD-------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 533 ~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
+|+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 999999986532 122478999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhccc
Q 004642 600 GTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 600 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
|++...... ........+..|+|||++....++.++|||||||++|||++ |..||..... ....+.+...
T Consensus 157 gl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------~~~~~~~~~~ 227 (270)
T cd05047 157 GLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEKLPQG 227 (270)
T ss_pred CCccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--------HHHHHHHhCC
Confidence 998632211 11111234567999999988889999999999999999997 9999854221 0111111111
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
...+... .....+.+++.+||+.+|.+||++.|+++.|..
T Consensus 228 ~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 228 YRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred CCCCCCC---cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 1111111 111237899999999999999999999999865
No 233
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.3e-36 Score=310.68 Aligned_cols=258 Identities=24% Similarity=0.352 Sum_probs=202.0
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++... +|+.||+|.+..... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD--ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 46888999999999999999665 789999998875432 223467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|..++........+++..+..++.|++.||.|||+. .+++|+||||+||+++.++.++|+|||.+..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 9999999998887643334689999999999999999999963 28999999999999999999999999999765322
Q ss_pred CCcccccccCCCccccccccccc------cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIV------VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
......++..|+|||.+.+.. ++.++||||+||++|+|++|+.||..... .............. .+.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~-~~~ 229 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY----ANIFAQLSAIVDGD-PPT 229 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch----hhHHHHHHHHhhcC-CCC
Confidence 223346788999999986543 47899999999999999999999864211 00001111122211 111
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.... ....+.+++.+||+.+|++||++++++++-..
T Consensus 230 ~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~ 265 (286)
T cd06622 230 LPSG---YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWL 265 (286)
T ss_pred CCcc---cCHHHHHHHHHHcccCcccCCCHHHHhcChhh
Confidence 1111 22337889999999999999999999998654
No 234
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.6e-35 Score=301.10 Aligned_cols=247 Identities=27% Similarity=0.418 Sum_probs=197.9
Q ss_pred eeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCC
Q 004642 456 YCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGS 535 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 535 (740)
+.||+|+||.||++...+++.||+|++...... ...+.+.+|++++++++|+||+++++++......++||||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 368999999999998767999999998765443 234678999999999999999999999999999999999999999
Q ss_pred chhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcc--c
Q 004642 536 LFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYR--T 613 (740)
Q Consensus 536 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~--~ 613 (740)
|.+++..... .+++..+..++.+++.|++|||++ +++||||||+||+++.++.++|+|||.+.......... .
T Consensus 79 l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 79 LLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 9999865432 578899999999999999999998 99999999999999999999999999997654221111 1
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDII 692 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 692 (740)
...++..|+|||.+.+..++.++|||||||++|||+| |..||..... ....+.+........... ...
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~ 222 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--------QQTRERIESGYRMPAPQL---CPE 222 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--------HHHHHHHhcCCCCCCCcc---CCH
Confidence 2234667999999988889999999999999999999 7888754321 111122222111111111 122
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 693 LVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 693 ~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.+.+++.+|+..+|++||++.|+++.|.
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 4889999999999999999999999885
No 235
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-35 Score=302.95 Aligned_cols=247 Identities=26% Similarity=0.453 Sum_probs=198.5
Q ss_pred cccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
++|++.+.||+|+||.||++.. +++.||+|.+..... .+.+.+|+.++++++|||++++++++...+ .+++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~-----~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT-----AQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcch-----HHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEE
Confidence 5688999999999999999975 688899999865432 357889999999999999999999987654 799999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 79 LMSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred CCCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 9999999999876432 3578999999999999999999998 9999999999999999999999999999764321
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
......+..|+|||++.+..++.++||||||+++|||++ |+.||..... ....+.+.....+.....
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~-- 221 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--------KEVKECVEKGYRMEPPEG-- 221 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHHHhCCCCCCCCCc--
Confidence 112234678999999988889999999999999999998 9999864321 111222222222221111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
....+.+++.+||+.+|++||+++++++.|..
T Consensus 222 -~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 222 -CPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 12337899999999999999999999998864
No 236
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2e-35 Score=304.69 Aligned_cols=257 Identities=26% Similarity=0.428 Sum_probs=204.5
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|.. .++..+|+|++....... ..+.+.+|+++++.++|+|++++++.+..++..++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 4788999999999999999965 467899999987544332 3578899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++........+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999997643333689999999999999999999998 9999999999999999999999999998776543
Q ss_pred CCc----ccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc-
Q 004642 609 SSY----RTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP- 682 (740)
Q Consensus 609 ~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 682 (740)
... .....|+..|+|||++... .++.++|||||||++|||++|+.||...... ....+.........
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 228 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-------KVLMLTLQNDPPSLE 228 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-------hhHHHHhcCCCCCcC
Confidence 322 1334688999999998876 7888999999999999999999998643221 11111111111100
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...........+.+++.+||+.||++||+++|++++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000112337899999999999999999999986
No 237
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.1e-35 Score=304.00 Aligned_cols=253 Identities=24% Similarity=0.396 Sum_probs=202.8
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cCeEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KKCMFLI 527 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 527 (740)
+|++.+.||.|+||.||++.. .+|+.||+|.+...... ....+++..|++++++++|||++++++++.. +...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 478889999999999999954 56889999998754432 3335678899999999999999999998764 4568999
Q ss_pred EEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHH-----hcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 528 YEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLH-----HDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH-----~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
|||+++++|.+++.... ....+++..++.++.||+.||+||| +. +++|+||+|+||+++.++.+||+|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 99999999999986532 2346899999999999999999999 66 999999999999999999999999999
Q ss_pred ceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
+..............|+..|+|||++.+..++.++||||||+++|+|++|+.||..... ....+.+.....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~ 228 (265)
T cd08217 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLASKIKEGKFR 228 (265)
T ss_pred cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHHHHHhcCCCC
Confidence 98775444333445789999999999988899999999999999999999999874321 1112222222211
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.... .....+.+++.+|++.+|++||++.|++++
T Consensus 229 ~~~~---~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 RIPY---RYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCcc---ccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1111 112347899999999999999999999986
No 238
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-35 Score=315.46 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=202.9
Q ss_pred hcccccceeeecccceEEEEEEeC--------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP--------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCL 519 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 519 (740)
..+|++.+.||+|+||.||++... .+..||+|.+...... ...+.+.+|++++.++ +||||+++++++.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH--HHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 357899999999999999999542 1236899988754322 2356888999999999 8999999999999
Q ss_pred ecCeEEEEEEeccCCCchhhhcCCC-------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 004642 520 HKKCMFLIYEYMERGSLFCVLHDDD-------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNI 586 (740)
Q Consensus 520 ~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 586 (740)
..+..+++|||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 9999999999999999999986532 123588999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecccceecccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCccccccc
Q 004642 587 LLDSNLEASVADFGTARLLHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSS 663 (740)
Q Consensus 587 ll~~~~~~kl~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~ 663 (740)
+++.++.+||+|||+++......... ....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--- 242 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--- 242 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH---
Confidence 99999999999999998664322211 11234567999999999889999999999999999998 8888754221
Q ss_pred CCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 664 SSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
......+.......... .....+.+++.+||+.+|++||++.|++++|....
T Consensus 243 -----~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 243 -----EELFKLLKEGHRMDKPA---NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred -----HHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 11112221111111111 11224789999999999999999999999998654
No 239
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-35 Score=322.99 Aligned_cols=264 Identities=25% Similarity=0.289 Sum_probs=201.2
Q ss_pred hcccccceeeecccceEEEEEEeC---CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP---EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
..+|.+.+.||+|+||.||++... .++.||+|.+... +...+|++++++++||||+++++++......+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 457999999999999999999543 3578999988643 23457999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
++||++. ++|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.++|+|||+++..
T Consensus 163 lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9999986 5788887433 3689999999999999999999998 9999999999999999999999999999766
Q ss_pred ccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccc------------------cCC
Q 004642 606 HVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS------------------SSS 665 (740)
Q Consensus 606 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~------------------~~~ 665 (740)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 433221 223469999999999999899999999999999999999999985432100 000
Q ss_pred CCCchhhhhh---cccCCCcch--hhh--HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCCh
Q 004642 666 GPKIMLIDVL---NQRLSPPVN--QKI--VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQ 727 (740)
Q Consensus 666 ~~~~~~~~~~---~~~l~~~~~--~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 727 (740)
.......... .....++.. ... ......+.+++.+|+..||++||++.|++.+-...+.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~ 384 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPIN 384 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchh
Confidence 0000000000 000000000 000 0011236789999999999999999999999888766544
No 240
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-35 Score=308.91 Aligned_cols=258 Identities=24% Similarity=0.388 Sum_probs=205.5
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|+||.||++... +++.+|+|.+.... ....+.+.+|++++++++||||+++++++..+...++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 467899999999999999999664 68899999986542 23346788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++..... .+++.++..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 81 IEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 999999999999875432 588999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC-
Q 004642 608 DSSYRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP- 681 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~- 681 (740)
.........|+..|+|||++. ...++.++||||||+++|||++|+.||..... ............+.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~ 228 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-------MRVLLKILKSEPPTL 228 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-------HHHHHHHhcCCCCCc
Confidence 333334456899999999875 34467799999999999999999999865321 11111211111100
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
...... ...+.+++.+||+.+|++||++.+++++-.....
T Consensus 229 ~~~~~~---~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 229 DQPSKW---SSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred CCcccC---CHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 001111 1237789999999999999999999998766544
No 241
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-35 Score=308.92 Aligned_cols=260 Identities=24% Similarity=0.370 Sum_probs=201.3
Q ss_pred cHHHHHHHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeee
Q 004642 441 LYEDLINATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFC 518 (740)
Q Consensus 441 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 518 (740)
.+.++..+.+.|++.+.||+|+||.||+|.. .+++.+|+|.+..... ....+..|+.++.++ +|+|++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED----EEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH----HHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 4555666778999999999999999999965 4688999998865332 235678899999998 799999999998
Q ss_pred ee------cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 004642 519 LH------KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL 592 (740)
Q Consensus 519 ~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 592 (740)
.. ....+++|||+++|+|.+++..... ..+++..+..++.||+.|++|||+. +++|+||+|+||+++.++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 53 4578999999999999998865332 2578888999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCcccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCC
Q 004642 593 EASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGP 667 (740)
Q Consensus 593 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~ 667 (740)
.++|+|||++..............|+..|+|||.+. ...++.++|||||||++|||++|+.||......
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~------ 232 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM------ 232 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH------
Confidence 999999999876543222233456899999999875 345778999999999999999999998643211
Q ss_pred CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 668 KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
................. .....+.+++.+||+.||++||++.|++++
T Consensus 233 -~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 233 -RALFLIPRNPPPKLKSK---KWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -hhhhhHhhCCCCCCccc---ccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00111111111110111 112238899999999999999999999875
No 242
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.1e-35 Score=307.97 Aligned_cols=263 Identities=25% Similarity=0.329 Sum_probs=199.8
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|..+ +|+.||+|++....... ...+.+.+|++++++++|||++++++++..+...++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 46888999999999999999665 58999999886543221 22356789999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++++.+..++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 80 EYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred eccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999988887765433 589999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCcccccccC--------CC-C--------Cch
Q 004642 609 SSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS--------SG-P--------KIM 670 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~--------~~-~--------~~~ 670 (740)
........++..|+|||++.+ ..++.++||||||+++|||++|+.||......... .. . ...
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 323334467889999999876 45788999999999999999999998643321000 00 0 000
Q ss_pred hhhhhcccCC--CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 671 LIDVLNQRLS--PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 671 ~~~~~~~~l~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
......+... .+...........+.+++.+||+.+|++||++.|++++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~ 284 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP 284 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence 0000000000 000000001123378999999999999999999998763
No 243
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2e-35 Score=308.73 Aligned_cols=251 Identities=26% Similarity=0.352 Sum_probs=205.5
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++... +++.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46889999999999999999654 68999999987654444444577889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999987653 588999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
.....|++.|+|||.+.+...+.++||||||+++|+|++|+.||..... ..............+ ...
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--~~~- 221 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-------IQIYEKILEGKVRFP--SFF- 221 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCccCC--ccC-
Confidence 2334688999999999888888999999999999999999999864321 111222222221111 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 689 QDIILVSTIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
...+.+++.+||..+|++|+ +++|++++-..
T Consensus 222 --~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~ 257 (290)
T cd05580 222 --SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257 (290)
T ss_pred --CHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccc
Confidence 22378999999999999998 88888877543
No 244
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.8e-35 Score=302.87 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=190.4
Q ss_pred eeeecccceEEEEEEeC----CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeee-ecCeEEEEEEe
Q 004642 456 YCIGTGGYGSVYKAELP----EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCL-HKKCMFLIYEY 530 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 530 (740)
+.||+|+||.||+|... ++..||+|++..... ....+.+.+|+.+++.++|||++++++++. .++..+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD--LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC--HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 35899999999999653 245799998864322 233567889999999999999999999876 45568999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+.+|+|.+++..... ..++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 79 MKHGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999999975432 367788899999999999999998 999999999999999999999999999976532211
Q ss_pred ----cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhC-CCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 611 ----YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMG-THPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 611 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
......++..|+|||++.+..++.++|||||||++|||++| ..||..... ......+..........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 225 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--------FDITVYLLQGRRLLQPE 225 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhcCCCCCCCC
Confidence 11123457789999999888899999999999999999995 555543211 11111111111111111
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
... ..+.+++.+||+.+|++||++.|++++|...
T Consensus 226 ~~~---~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 226 YCP---DPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred cCC---HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111 2378999999999999999999999999764
No 245
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.1e-35 Score=309.95 Aligned_cols=273 Identities=25% Similarity=0.309 Sum_probs=206.6
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCccc--chHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETE--DSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
+|++.+.||+|+||.||+|.. .+|+.||+|++...... .......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477888999999999999965 46899999999765443 122345677899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+ +++|.+++.... ..+++..+..++.||++||+|||++ +++|+||+|+||+++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 889999997644 2589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchh------h
Q 004642 608 DSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIML------I 672 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~------~ 672 (740)
.........++..|+|||.+.+ ..++.++|||||||++|||++|..||........ ........ .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 3333333456788999998865 4578899999999999999999877754322100 00000000 0
Q ss_pred hhhcccC--CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChhh
Q 004642 673 DVLNQRL--SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQKA 729 (740)
Q Consensus 673 ~~~~~~l--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 729 (740)
....... ..+...........+.+++.+||+.+|++||+++|++++-.....+.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 0000000 00000001112234789999999999999999999999877666555443
No 246
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.8e-35 Score=305.19 Aligned_cols=256 Identities=23% Similarity=0.373 Sum_probs=202.4
Q ss_pred cccccceeeecccceEEEEEEeC------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
++|++.+.||+|+||.||+|+.+ +.+.|++|.+..... ....+.+.+|++++++++|+||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 57888999999999999999754 346789998865432 2345788999999999999999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCcc------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEe
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEA------IELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVA 597 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 597 (740)
.++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 99999999999999999765422 2589999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCC-cccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhh
Q 004642 598 DFGTARLLHVDSS-YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVL 675 (740)
Q Consensus 598 DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 675 (740)
|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-------~~~~~~~~ 232 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-------EEVLNRLQ 232 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-------HHHHHHHH
Confidence 9999875432221 1223356788999999988888899999999999999999 7888754221 11111111
Q ss_pred cccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 676 NQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 676 ~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.......... .....+.+++.+||+.+|++||++.|++++|.
T Consensus 233 ~~~~~~~~~~---~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 AGKLELPVPE---GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCcCCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111111111 11124889999999999999999999999875
No 247
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.6e-35 Score=309.61 Aligned_cols=264 Identities=26% Similarity=0.375 Sum_probs=203.7
Q ss_pred ccHHHHHHHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeee
Q 004642 440 ILYEDLINATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGF 517 (740)
Q Consensus 440 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 517 (740)
+.++++..+.++|++.+.||+|+||.||++.. .+++.+|+|.+...... ...+.+|+.+++++ +|||+++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV----DEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccH----HHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 34456666789999999999999999999965 46889999998654321 35677899999998 89999999999
Q ss_pred eeec-----CeEEEEEEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 004642 518 CLHK-----KCMFLIYEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN 591 (740)
Q Consensus 518 ~~~~-----~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 591 (740)
+... +..++||||+++++|.++++... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.+
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 8754 35899999999999999886422 223588999999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCCCcccccccCCCcccccccccc-----ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCC
Q 004642 592 LEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTI-----VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSG 666 (740)
Q Consensus 592 ~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~ 666 (740)
+.++|+|||.+..............|+..|+|||++... .++.++|||||||++|||++|+.||......
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----- 239 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----- 239 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-----
Confidence 999999999998765433333344688999999987643 3678999999999999999999998643221
Q ss_pred CCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 667 PKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 667 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
....+...... +.. .........+.+++.+||+.+|++||++.|++++-
T Consensus 240 --~~~~~~~~~~~-~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~ 288 (291)
T cd06639 240 --KTLFKIPRNPP-PTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHP 288 (291)
T ss_pred --HHHHHHhcCCC-CCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence 11111111100 000 00011122378999999999999999999999863
No 248
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=317.86 Aligned_cols=255 Identities=24% Similarity=0.423 Sum_probs=206.9
Q ss_pred ccccceeeecccceEEEEEEeC--CCc--EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP--EGK--VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
+....+.||+|.||.|++|.|. +|+ .||||.++...... ....|.+|+.+|.+++|+|++++||...+ ...++
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM 187 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM 187 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence 3444577999999999999765 344 58999998766543 46899999999999999999999999988 56889
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|+|.++.|+|.+.|++ .....+-......++.|||.||.||..+ ++|||||..+|+++.....+||+|||+.+.+.
T Consensus 188 V~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred HhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 9999999999999998 3344678888999999999999999999 99999999999999999999999999999887
Q ss_pred cCCCcccc---cccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 607 VDSSYRTL---RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 607 ~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
........ +--.+.|+|||.+....++.++|||+|||++|||+| |..||-.... ..+.+.+|.+-.-+
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------~qIL~~iD~~erLp 335 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------IQILKNIDAGERLP 335 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------HHHHHhccccccCC
Confidence 65444322 234678999999999999999999999999999999 7778654332 22333444333222
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.+....+ .++++++.||...|++||+|..+.+.+...+
T Consensus 336 RPk~cse---dIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 336 RPKYCSE---DIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred CCCCChH---HHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 2332333 4899999999999999999999987765543
No 249
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.9e-35 Score=306.46 Aligned_cols=263 Identities=26% Similarity=0.389 Sum_probs=205.6
Q ss_pred cccccceeeecccceEEEEEEeC-----CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cC
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-----EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KK 522 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 522 (740)
+.|++.+.||+|+||.||++.+. +++.||+|++...... ...+.+.+|+++++.++||||+++++++.. +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 46778899999999999999753 3688999999765543 335789999999999999999999999887 56
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..+++|||+++++|.+++..... .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 78999999999999999976543 589999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCCcc---cccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccC----C---CCCchhh
Q 004642 603 RLLHVDSSYR---TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS----S---GPKIMLI 672 (740)
Q Consensus 603 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~----~---~~~~~~~ 672 (740)
.......... ....++..|+|||...+..++.++||||||+++|||++|+.|+......... . .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 8765322211 1224566799999998888999999999999999999999997542211000 0 0111122
Q ss_pred hhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 673 DVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 673 ~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+.+......+... .....+.+++.+||+.+|++||++.|++++|...
T Consensus 237 ~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPP---SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCc---cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 2222222221111 1123488999999999999999999999999754
No 250
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=5.2e-35 Score=303.51 Aligned_cols=253 Identities=30% Similarity=0.446 Sum_probs=204.0
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+-|++.+.||+|+||.||+|.. .+++.||+|.+...... ...+.+.+|++++.+++||||+++++++..++..++||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 4577888999999999999954 46889999988654332 23467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 82 EYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 999999999988643 578999999999999999999998 9999999999999999999999999999776543
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........++..|+|||+..+..++.++|||||||++|+|++|..||..... ......+.....+....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~--- 223 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--------MKVLFLIPKNNPPTLEG--- 223 (277)
T ss_pred hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--------HHHHHHHhcCCCCCCCc---
Confidence 3333345688899999999888888999999999999999999999864221 11111111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.....+.+++.+||+.+|++||++.+++++-...
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~ 257 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIV 257 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence 1122378899999999999999999999985544
No 251
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=305.31 Aligned_cols=261 Identities=22% Similarity=0.286 Sum_probs=214.0
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.+.|..-++||+||||.||-+.. .+|+.||.|++.+..............|.++++++..+.||.+--.|.+++.+++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 46788889999999999999954 47999999998776655555556778999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+..|.||+|.-+|.+.+. ..+++..+..++.+|+.||++||+. +||.||+||+|||+|++|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999988887665 4689999999999999999999999 999999999999999999999999999998865
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.... ..++||.+|||||++....|+...|.||+||++|||+.|+.||..... ....+-++++.........
T Consensus 340 g~~~-~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke--------Kvk~eEvdrr~~~~~~ey~ 410 (591)
T KOG0986|consen 340 GKPI-RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE--------KVKREEVDRRTLEDPEEYS 410 (591)
T ss_pred CCcc-ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh--------hhhHHHHHHHHhcchhhcc
Confidence 4444 444899999999999999999999999999999999999999875322 2222233333322111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHcC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRP-----TMQRISQELLAG 722 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~~ 722 (740)
..-..+..++....++.||++|- .+++|.+|....
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk 450 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFK 450 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccc
Confidence 22233367788889999999985 677888776554
No 252
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.3e-35 Score=301.67 Aligned_cols=255 Identities=28% Similarity=0.406 Sum_probs=207.6
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|++|.||+|... +++.|++|++...... ...+.+.+|++++.+++|+|++++++++..++..++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 36888999999999999999665 5899999998765432 33578899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
||+++++|.+++... ..+++..+..++.|++.|++|||+ . +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 79 EYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999999764 268899999999999999999999 8 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.........++..|+|||.+.+..++.++||||||+++|+|++|+.||..... .........+..... +.....
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~----~~~~~~~~~~~~~~~-~~~~~~- 226 (264)
T cd06623 153 TLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ----PSFFELMQAICDGPP-PSLPAE- 226 (264)
T ss_pred CCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc----cCHHHHHHHHhcCCC-CCCCcc-
Confidence 44333345688999999999988899999999999999999999999865431 011111122221111 111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.....+.+++.+|++.+|++||++.|++++-
T Consensus 227 -~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~ 257 (264)
T cd06623 227 -EFSPEFRDFISACLQKDPKKRPSAAELLQHP 257 (264)
T ss_pred -cCCHHHHHHHHHHccCChhhCCCHHHHHhCH
Confidence 0123488999999999999999999999874
No 253
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-36 Score=311.36 Aligned_cols=254 Identities=28% Similarity=0.436 Sum_probs=206.0
Q ss_pred hcccccceeeecccceEEEEEEeC---CCc--EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP---EGK--VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~---~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
.+.....++||.|.||.||+|... .|+ .||||..+.....+. .+.|..|..+|++++|||||+++|.|.+. .
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~--tekflqEa~iMrnfdHphIikLIGv~~e~-P 464 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD--TEKFLQEASIMRNFDHPHIIKLIGVCVEQ-P 464 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh--HHHHHHHHHHHHhCCCcchhheeeeeecc-c
Confidence 344555678999999999999432 343 488898887665544 58899999999999999999999999876 4
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.|+|||.++-|.|..+++..+. .++......++.||+.||+|||+. .+|||||..+|||+.....||++|||+++
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred eeEEEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhh
Confidence 8999999999999999987665 578888999999999999999999 99999999999999999999999999999
Q ss_pred ecccCCCccccc-ccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 604 LLHVDSSYRTLR-AGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 604 ~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
.+..+..+...+ .-+..|||||.+.-.+++.+||||.|||.+||++. |..||.....- +..-.+.+.-+.
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs--------DVI~~iEnGeRl 611 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS--------DVIGHIENGERL 611 (974)
T ss_pred hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc--------ceEEEecCCCCC
Confidence 987666554332 23678999999999999999999999999999997 99998764321 111111222222
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
+.+ ..+...+..++.+||+.||.+||++.|+...|..
T Consensus 612 P~P---~nCPp~LYslmskcWayeP~kRPrftei~~~lsd 648 (974)
T KOG4257|consen 612 PCP---PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSD 648 (974)
T ss_pred CCC---CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHH
Confidence 222 2334458899999999999999999999988854
No 254
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=8.5e-36 Score=310.95 Aligned_cols=262 Identities=26% Similarity=0.356 Sum_probs=199.9
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|..+ +++.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 46888999999999999999765 58999999987644332 33467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++++++..+..... .+++.++..++.||+.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred ecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999999887765432 478999999999999999999998 9999999999999999999999999999876443
Q ss_pred CCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCchhhhhh-----
Q 004642 609 SSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKIMLIDVL----- 675 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~----- 675 (740)
........++..|+|||+..+ ..++.++||||||+++|||++|+.||........ ............
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 333333467899999999875 3467899999999999999999998864321100 000000000000
Q ss_pred -cccCCCcc------hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 676 -NQRLSPPV------NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 676 -~~~l~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.....+.. ..........+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000000 00001112348899999999999999999999876
No 255
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.3e-35 Score=317.78 Aligned_cols=263 Identities=21% Similarity=0.255 Sum_probs=197.6
Q ss_pred HHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec----
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK---- 521 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 521 (740)
...++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 4568899999999999999999954 56889999998754322 22345677899999999999999999987543
Q ss_pred --CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 522 --KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 522 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
...+++++++ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3578999987 67888777532 588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCch
Q 004642 600 GTARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIM 670 (740)
Q Consensus 600 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~ 670 (740)
|+++..... .....||..|+|||++.+ ..++.++||||+||++|+|++|+.||........ .......
T Consensus 163 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 163 GLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred ccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999865432 233468999999999876 4688899999999999999999999864321000 0000000
Q ss_pred h--------hhhhcccCCCcchh----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 671 L--------IDVLNQRLSPPVNQ----KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 671 ~--------~~~~~~~l~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
. ..... .++..... ........+.+++.+|++.||++|||++|++++-...
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~ 302 (343)
T cd07878 240 LKKISSEHARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFS 302 (343)
T ss_pred HHhcchhhHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence 0 00000 00000000 0001112367899999999999999999999986443
No 256
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=317.15 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=201.9
Q ss_pred eeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCC
Q 004642 457 CIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGS 535 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 535 (740)
+||+|.||+||.|+.. +..++|||-+..... +..+-+.+|+.+.++++|+|||+++|.+.++++.-+.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 5999999999999654 467799999876443 335778899999999999999999999999999999999999999
Q ss_pred chhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc-CCCcEEEeecccceecccCCCcccc
Q 004642 536 LFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD-SNLEASVADFGTARLLHVDSSYRTL 614 (740)
Q Consensus 536 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~ 614 (740)
|.+++...=+...=.+.++-.+.+||+.||.|||+. .|||||||-.|||++ -.|.+||+|||-++.+..-......
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 999997643322336778888999999999999999 999999999999997 6789999999999988665666666
Q ss_pred cccCCCcccccccccc--ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHH
Q 004642 615 RAGTYGYIAPELAYTI--VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDII 692 (740)
Q Consensus 615 ~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 692 (740)
+.||..|||||++..+ .|..++|||||||++.||.||++||-.... ....++.--+.+. .++.+. +-..
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs-----pqAAMFkVGmyKv-HP~iPe---elsa 806 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS-----PQAAMFKVGMYKV-HPPIPE---ELSA 806 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC-----hhHhhhhhcceec-CCCCcH---HHHH
Confidence 7899999999999865 478899999999999999999999864332 1122222222221 222222 2233
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 693 LVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 693 ~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
+...+|.+|+.+||..||+|+++++.-.-
T Consensus 807 eak~FilrcFepd~~~R~sA~~LL~DpFl 835 (1226)
T KOG4279|consen 807 EAKNFILRCFEPDPCDRPSAKDLLQDPFL 835 (1226)
T ss_pred HHHHHHHHHcCCCcccCccHHHhccCccc
Confidence 47889999999999999999999987643
No 257
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.6e-35 Score=301.81 Aligned_cols=253 Identities=23% Similarity=0.343 Sum_probs=197.6
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcc--cchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSET--EDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCM 524 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 524 (740)
++|++.+.||+|+||.||++.. .+|+.||+|.+..... ......+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4788999999999999999965 4589999998864321 2223456888999999999999999999988763 468
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
+++|||+++++|.+++.... .+++....+++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999886543 478888999999999999999998 999999999999999999999999999876
Q ss_pred cccCC---CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDS---SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .....+.......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~ 228 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-------MAAIFKIATQPTNP 228 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch-------HHHHHHHhcCCCCC
Confidence 53211 112234688999999999888889999999999999999999999864221 11111111111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
..+. .....+.+++.+|+. +|++||+++|++++-
T Consensus 229 ~~~~---~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 229 VLPP---HVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred CCch---hhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 1111 122337788999984 999999999998764
No 258
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=330.47 Aligned_cols=266 Identities=19% Similarity=0.262 Sum_probs=194.3
Q ss_pred HHHHHhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCC------Cccceeee
Q 004642 444 DLINATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRH------RNIVKLYG 516 (740)
Q Consensus 444 ~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~ 516 (740)
++...+++|++.+.||+|+||+||+|.. ..++.||||+++.... ..+.+..|+++++.++| .+++.+++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK----YTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh----hHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 3344568899999999999999999955 4678899999964321 12445567777776654 45888988
Q ss_pred eeeec-CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEcCCC--
Q 004642 517 FCLHK-KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLDSNL-- 592 (740)
Q Consensus 517 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~-- 592 (740)
++... +..++|||++ +++|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcc
Confidence 88764 5788999988 668888886543 58899999999999999999997 5 999999999999998765
Q ss_pred --------------cEEEeecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcc
Q 004642 593 --------------EASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLL 658 (740)
Q Consensus 593 --------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~ 658 (740)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+..
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999886432 2233457999999999999999999999999999999999999999753
Q ss_pred ccccc--------CCCCCch--------hhhhhcc--cCCCcchh------------hhHHHHHHHHHHHHHcccCCCCC
Q 004642 659 SSLSS--------SSGPKIM--------LIDVLNQ--RLSPPVNQ------------KIVQDIILVSTIAFACLSSQPKS 708 (740)
Q Consensus 659 ~~~~~--------~~~~~~~--------~~~~~~~--~l~~~~~~------------~~~~~~~~l~~li~~cl~~dP~~ 708 (740)
..... ...+..+ ..+..+. .+.+.... ........+.+|+.+||+.||++
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 32100 0000000 0000000 00000000 00011234779999999999999
Q ss_pred CCCHHHHHHHHHcCC
Q 004642 709 RPTMQRISQELLAGK 723 (740)
Q Consensus 709 RPs~~ev~~~L~~~~ 723 (740)
|||++|+++|-...+
T Consensus 429 R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 429 RLNARQMTTHPYVLK 443 (467)
T ss_pred CCCHHHHhcCccccc
Confidence 999999999887654
No 259
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-36 Score=303.49 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=213.5
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..-|...+.||+|.|..|-++++ =+|..||||++.+....+ .....+.+|++.|+.++|||||++|++...+...|+|
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 35577788899999999999843 379999999998766543 3356788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE-cCCCcEEEeecccceecc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILL-DSNLEASVADFGTARLLH 606 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll-~~~~~~kl~DfG~a~~~~ 606 (740)
.|.-++|+|+++|.+... .+.+....+++.||+.|+.|+|+- .+|||||||+||.+ .+-|-||++|||++..+.
T Consensus 96 LELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 999999999999987665 478888999999999999999998 99999999999866 567899999999998876
Q ss_pred cCCCcccccccCCCccccccccccccC-CcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVT-GKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
+.... +..+|+..|-|||++.+..|+ +++||||+|||||-+++|+.||+... ..+.+..++|-....+..
T Consensus 171 PG~kL-~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN-------DSETLTmImDCKYtvPsh- 241 (864)
T KOG4717|consen 171 PGKKL-TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN-------DSETLTMIMDCKYTVPSH- 241 (864)
T ss_pred Ccchh-hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc-------chhhhhhhhcccccCchh-
Confidence 54443 455999999999999999887 46899999999999999999997532 344555666655544322
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.. .+..++|..|+..||.+|.+.+|+..+-+-.
T Consensus 242 -vS---~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 242 -VS---KECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred -hh---HHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 22 2378999999999999999999999876544
No 260
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4e-35 Score=303.01 Aligned_cols=256 Identities=23% Similarity=0.388 Sum_probs=201.0
Q ss_pred ccccceeeecccceEEEEEEeCC--CcEEEEEEccCCcc-------cchHHHHHHHHHHHHHhc-cCCCccceeeeeeee
Q 004642 451 DFHIKYCIGTGGYGSVYKAELPE--GKVVALKKLHHSET-------EDSAFVKSFQNEAHVLST-VRHRNIVKLYGFCLH 520 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 520 (740)
+|++.+.||+|+||.||+|.... ++.+|+|.+..... .......++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999997654 68899998864321 122334567788888875 799999999999999
Q ss_pred cCeEEEEEEeccCCCchhhhcCC-CccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEcCCCcEEEee
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDD-DEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLDSNLEASVAD 598 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~D 598 (740)
++..+++|||+++++|.+++... .....+++..++.++.|++.||.|||+ . +++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999887542 123368899999999999999999996 5 899999999999999999999999
Q ss_pred cccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc
Q 004642 599 FGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 599 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
||.+....... ......|+..|+|||...+..++.++||||||+++|||++|+.||..... ...........
T Consensus 158 fg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-------~~~~~~~~~~~ 229 (269)
T cd08528 158 FGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-------LSLATKIVEAV 229 (269)
T ss_pred ccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-------HHHHHHHhhcc
Confidence 99998765433 33345689999999999988899999999999999999999999764221 11111222221
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
..+..... ....+.+++.+||+.||++||++.|+.+++.
T Consensus 230 ~~~~~~~~---~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPLPEGM---YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcCCccc---CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11111111 1223789999999999999999999999875
No 261
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.8e-35 Score=313.08 Aligned_cols=264 Identities=19% Similarity=0.276 Sum_probs=195.3
Q ss_pred cceeeecc--cceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 454 IKYCIGTG--GYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 454 ~~~~lg~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
+.+.||+| +|++||++.. .+|+.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccH-HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45679999 7899999954 578999999997654332 3346778899999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+........
T Consensus 81 ~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 81 MAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred cCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999865322 2478999999999999999999998 999999999999999999999999986543321111
Q ss_pred -------cccccccCCCccccccccc--cccCCcchhHhHHHHHHHHHhCCCCCCccccccc----CCC--C--------
Q 004642 611 -------YRTLRAGTYGYIAPELAYT--IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS----SSG--P-------- 667 (740)
Q Consensus 611 -------~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~----~~~--~-------- 667 (740)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ... .
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 1122346778999999876 4588999999999999999999999974321000 000 0
Q ss_pred --------------Cchhhhhhc--ccCCC----cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 668 --------------KIMLIDVLN--QRLSP----PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 668 --------------~~~~~~~~~--~~l~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+....+... ..... ............+.+++.+||+.||++|||++|++++....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 000000000 00000 00000011123478999999999999999999999987654
No 262
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.7e-35 Score=303.03 Aligned_cols=256 Identities=24% Similarity=0.436 Sum_probs=201.5
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccc---hHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETED---SAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
+|+..+.||+|+||.||++.. .+++.||+|++....... ....+.+.+|++++++++|+||+++++++.+++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999954 578999999987543221 2345788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-cEEEeecccceec
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-EASVADFGTARLL 605 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~DfG~a~~~ 605 (740)
||||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999987543 578999999999999999999999 999999999999998776 5999999999776
Q ss_pred ccCCC----cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 606 HVDSS----YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 606 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
..... ......|+..|+|||.+.+..++.++||||+|+++|+|++|..||..... ................+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~ 230 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH----SNHLALIFKIASATTAP 230 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC----cchHHHHHHHhccCCCC
Confidence 53311 12234678899999999888889999999999999999999999863221 01111111111111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
..+. .....+.+++.+|+..+|++||++.|++++-
T Consensus 231 ~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~ 265 (268)
T cd06630 231 SIPE---HLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265 (268)
T ss_pred CCch---hhCHHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence 1111 1123378899999999999999999998753
No 263
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.9e-35 Score=299.25 Aligned_cols=251 Identities=23% Similarity=0.390 Sum_probs=201.0
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||++.. .+++.+|+|.+....... ...+.+.+|++++++++|||++++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 478899999999999999955 468899999987654332 335788999999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CcEEEeecccceecccC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN-LEASVADFGTARLLHVD 608 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~DfG~a~~~~~~ 608 (740)
|+++++|.+++.... ...+++..+..++.|++.|++|||++ +++|+||+|+||+++.+ +.++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 80 YAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred cCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999997643 22578999999999999999999998 99999999999999855 45799999999876533
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
.. .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||+.... ............. +.....
T Consensus 156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~- 225 (256)
T cd08220 156 SK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-------PALVLKIMSGTFA-PISDRY- 225 (256)
T ss_pred cc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-------HHHHHHHHhcCCC-CCCCCc-
Confidence 22 2234688999999999988889999999999999999999999864221 1111122211111 111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+.+++.+||+.+|++|||+.|++++
T Consensus 226 --~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 226 --SPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred --CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1237899999999999999999999876
No 264
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-35 Score=303.94 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=186.6
Q ss_pred eeecccceEEEEEEeCC---CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 457 CIGTGGYGSVYKAELPE---GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
.||+|+||.||+|...+ ...+|+|.+..... ......+.+|++.++.++||||+++++++.+....++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT--PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC--hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 58999999999996543 35688888764432 23346788999999999999999999999999999999999999
Q ss_pred CCchhhhcCCCc--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc
Q 004642 534 GSLFCVLHDDDE--AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY 611 (740)
Q Consensus 534 g~L~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 611 (740)
|+|.+++..... ....++.....++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 999999876432 22356788899999999999999998 9999999999999999999999999998754332211
Q ss_pred --ccccccCCCccccccccc-------cccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcc-cCC
Q 004642 612 --RTLRAGTYGYIAPELAYT-------IVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQ-RLS 680 (740)
Q Consensus 612 --~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~l~ 680 (740)
.....++..|+|||+... ..++.++|||||||++|||++ |..||...... ......+.. ...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~~~~~~~~~~~~~ 229 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-------QVLKQVVREQDIK 229 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-------HHHHHHhhccCcc
Confidence 122345678999998643 356789999999999999999 77887643211 011111111 000
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.+.+.........+.+++..|| .||++||+++||++.|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0000000111223667888898 59999999999998863
No 265
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.7e-35 Score=307.37 Aligned_cols=257 Identities=26% Similarity=0.358 Sum_probs=201.9
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.+.|.+.+.||+|+||.||+|... +|+.||+|++...........+++.+|+++++.++|||++++++++..++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 456888999999999999999654 6899999998755444444456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++ ++.+.+..... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~g-~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCLG-SASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhCC-CHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 999974 66666653322 589999999999999999999998 999999999999999999999999999976542
Q ss_pred CCCcccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 608 DSSYRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
. ....++..|+|||++. ...++.++||||||+++|||++|+.||...... ...........+....
T Consensus 168 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~ 236 (307)
T cd06607 168 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNDSPTLSS 236 (307)
T ss_pred C----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-------HHHHHHhcCCCCCCCc
Confidence 2 2346788999999874 456788999999999999999999997643211 0011111111111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
. .....+.+++.+||+.+|++||++.+++++.......
T Consensus 237 ~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 237 N---DWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred h---hhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 1 1122378999999999999999999999987665443
No 266
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=7.3e-35 Score=302.74 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=202.0
Q ss_pred hcccccceeeecccceEEEEEEeC-CCc----EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGK----VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
..+|++.+.||+|+||.||+|..+ +|+ .+|+|....... ......+.+|++++++++|||++++++++.. ..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 357888999999999999999654 333 589998876543 2334678899999999999999999999987 78
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.++||||+++|+|.+++..... .+++..+..++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 8999999999999999976543 488999999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCCccc--ccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 604 LLHVDSSYRT--LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 604 ~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
.......... ...++..|+|||......++.++|+||||+++||+++ |+.||..... ......+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~ 229 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLEKGER 229 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhCCCC
Confidence 7653322211 1123568999999988889999999999999999998 9999864321 111222222111
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+.+.. ....+.+++.+||..+|.+||++.++++.|...
T Consensus 230 ~~~~~~---~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 230 LPQPPI---CTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred CCCCCC---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111111 112377899999999999999999999999875
No 267
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.4e-35 Score=309.16 Aligned_cols=193 Identities=26% Similarity=0.415 Sum_probs=158.1
Q ss_pred eeeecccceEEEEEEeC---CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEe
Q 004642 456 YCIGTGGYGSVYKAELP---EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KKCMFLIYEY 530 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 530 (740)
.+||+|+||.||+|... +++.||+|.+...... ..+.+|++++++++||||+++++++.. +...++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS-----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc-----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 57999999999999754 4578999998754322 457789999999999999999998854 5678999999
Q ss_pred ccCCCchhhhcCC------CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE----cCCCcEEEeecc
Q 004642 531 MERGSLFCVLHDD------DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILL----DSNLEASVADFG 600 (740)
Q Consensus 531 ~~~g~L~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~DfG 600 (740)
+++ +|.+++... .....+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 875 676666421 1223588999999999999999999998 99999999999999 566789999999
Q ss_pred cceecccCCC---cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCc
Q 004642 601 TARLLHVDSS---YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGL 657 (740)
Q Consensus 601 ~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~ 657 (740)
+++....... ......||+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9987643221 12334689999999998764 578899999999999999999999864
No 268
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.5e-35 Score=300.45 Aligned_cols=253 Identities=30% Similarity=0.445 Sum_probs=201.9
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||+|.. .+++.|++|.+...... ....+.+..|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 578889999999999999965 47899999998765443 3456889999999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||++++++.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 80 YCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred cCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999987643 478899999999999999999998 99999999999999999999999999998765433
Q ss_pred Cccc----ccccCCCccccccccccc---cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 610 SYRT----LRAGTYGYIAPELAYTIV---VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 610 ~~~~----~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
.... ...++..|+|||++.+.. ++.++||||||+++||+++|+.||..... .......... ...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~------~~~~~~~~~~-~~~~~ 226 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN------EFQIMFHVGA-GHKPP 226 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc------hHHHHHHHhc-CCCCC
Confidence 2211 245788999999998766 78899999999999999999999864321 0011111111 11111
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.+. .......+.+++.+||+.+|++||++.|++++
T Consensus 227 ~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 227 IPD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCc-ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111 11112337789999999999999999998864
No 269
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.2e-35 Score=299.97 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=200.9
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCccc--chHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETE--DSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
+|+..+.||+|+||.||+|... +++.|++|.+...... .++..+.+.+|++++++++|+||+++++++..+...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999665 7899999988654321 233457889999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999987643 578999999999999999999998 999999999999999999999999999877543
Q ss_pred CCCcccccccCCCccccccccccc-cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIV-VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.. ......|+..|+|||.+.... ++.++|+||||+++|+|++|+.||..... .............+.....
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~ 226 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-------VAAVFKIGRSKELPPIPDH 226 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-------HHHHHHHHhcccCCCcCCC
Confidence 32 223456889999999987766 88899999999999999999999864321 0111111110111111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
....+.+++.+||+.+|++||++.+++++
T Consensus 227 ---~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 227 ---LSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ---cCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 12237789999999999999999999875
No 270
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.9e-35 Score=301.38 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=199.5
Q ss_pred cccccceeeecccceEEEEEEeCC----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPE----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
++|.+.+.||+|+||.||+|...+ ...||+|........ ...+.+.+|++++++++||||+++++++.. +..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSP--SVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCH--HHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 468888999999999999996543 246899988755432 334688999999999999999999998875 4578
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++..
T Consensus 83 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999999976432 579999999999999999999998 9999999999999999999999999999876
Q ss_pred ccCCCcc-cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcc
Q 004642 606 HVDSSYR-TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPV 683 (740)
Q Consensus 606 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 683 (740)
....... ....++..|+|||.+....++.++||||||+++||+++ |..||...... ..... +........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-------~~~~~-~~~~~~~~~ 229 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-------DVIGR-IENGERLPM 229 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHH-HHcCCcCCC
Confidence 4332211 22234568999999988889999999999999999996 99998643211 11111 111111111
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.. .....+.+++.+|+..+|++||++.++++.|...
T Consensus 230 ~~---~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 230 PP---NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred CC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11 1122488999999999999999999999999875
No 271
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.5e-35 Score=300.54 Aligned_cols=240 Identities=23% Similarity=0.322 Sum_probs=186.4
Q ss_pred eeeecccceEEEEEEeCC-------------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 456 YCIGTGGYGSVYKAELPE-------------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
+.||+|+||.||+|.+.. ...|++|.+..... .....+.+|+.++..++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR---DISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh---hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 358999999999996532 23588888765332 23467888999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc-------EE
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE-------AS 595 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~-------~k 595 (740)
..++||||+++|+|..+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 99999999999999888865432 578999999999999999999998 9999999999999987664 89
Q ss_pred EeecccceecccCCCcccccccCCCcccccccc-ccccCCcchhHhHHHHHHHHH-hCCCCCCcccccccCCCCCchhhh
Q 004642 596 VADFGTARLLHVDSSYRTLRAGTYGYIAPELAY-TIVVTGKCDVYSFGVVALEVL-MGTHPGGLLSSLSSSSGPKIMLID 673 (740)
Q Consensus 596 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 673 (740)
++|||.+...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.|+...... ....
T Consensus 153 l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--------~~~~ 220 (262)
T cd05077 153 LSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--------EKER 220 (262)
T ss_pred eCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--------HHHH
Confidence 9999998654322 2235788999999886 466888999999999999998 588886532110 0111
Q ss_pred hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 674 VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 674 ~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.......... .....+.+++.+||+.||++||++.+++++++
T Consensus 221 ~~~~~~~~~~-----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 221 FYEGQCMLVT-----PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHhcCccCCC-----CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1111111100 11123789999999999999999999998863
No 272
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.1e-35 Score=302.80 Aligned_cols=238 Identities=24% Similarity=0.352 Sum_probs=185.1
Q ss_pred eeecccceEEEEEEeCC-------------------------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCcc
Q 004642 457 CIGTGGYGSVYKAELPE-------------------------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNI 511 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 511 (740)
.||+|+||.||+|.+.. ...|++|++..... .....+.+|++++++++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCCCCCe
Confidence 58999999999986421 13588888865322 234678889999999999999
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN 591 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~ 591 (740)
+++++++.++...++||||+++|+|..++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++..
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 9999999999999999999999999988865432 578899999999999999999998 99999999999999865
Q ss_pred C-------cEEEeecccceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHH-hCCCCCCcccccc
Q 004642 592 L-------EASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVL-MGTHPGGLLSSLS 662 (740)
Q Consensus 592 ~-------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell-tg~~p~~~~~~~~ 662 (740)
+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||.....
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-- 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP-- 227 (274)
T ss_pred CcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--
Confidence 4 3799999988643221 22357888999998865 56788999999999999995 68888764321
Q ss_pred cCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 663 SSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.............+.. . ...+.+++.+||+.+|++||++.+++++|
T Consensus 228 ------~~~~~~~~~~~~~~~~--~---~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 ------SEKERFYEKKHRLPEP--S---CKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ------HHHHHHHHhccCCCCC--C---ChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 0111122222111111 1 12378899999999999999999999987
No 273
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.1e-35 Score=307.59 Aligned_cols=255 Identities=25% Similarity=0.418 Sum_probs=198.9
Q ss_pred hcccccceeeecccceEEEEEEeC-CCc----EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGK----VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (740)
.++|+..+.||+|+||.||+|.+. +|+ .||+|.+...... ....++.+|+.++++++||||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP--KANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 357788899999999999999653 444 4788888654332 2235788999999999999999999998764 4
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.++++||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||+++
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred ceeeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccc
Confidence 6799999999999999875432 478899999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 604 LLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 604 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
........ .....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ....+.+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~ 229 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--------REIPDLLEKGER 229 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHCCCC
Confidence 76432221 122345678999999998889999999999999999997 8899764221 111122222111
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.+... .....+.+++.+||..+|++||+++++++.+...
T Consensus 230 ~~~~~---~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 230 LPQPP---ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111 1112378899999999999999999999999864
No 274
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-35 Score=315.33 Aligned_cols=191 Identities=25% Similarity=0.341 Sum_probs=163.3
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
...+|.+.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++..++..++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 3457999999999999999999654 5678999975432 23468999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|+||+. ++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 135 v~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 999996 58888776533 2589999999999999999999998 99999999999999999999999999997543
Q ss_pred cCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCC
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHP 654 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p 654 (740)
... ......||..|+|||++.+..++.++|||||||++|||+++..|
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 209 VAP-AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred cCc-ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 222 22334689999999999998999999999999999999986554
No 275
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.9e-35 Score=304.68 Aligned_cols=258 Identities=26% Similarity=0.358 Sum_probs=204.8
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++... +++.+|+|.+...... ...+++.+|++++++++||||+++++++..++..++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 36778889999999999999665 6899999998765432 33567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++|+||||+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 79 EYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred EecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 9999999999987653 367889999999999999999998 7 999999999999999999999999999876532
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
... ....++..|+|||+..+..++.++||||+|+++|+|++|+.||...... ................ +.....
T Consensus 154 ~~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~- 227 (265)
T cd06605 154 SLA--KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP--PDGIFELLQYIVNEPP-PRLPSG- 227 (265)
T ss_pred HHh--hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc--cccHHHHHHHHhcCCC-CCCChh-
Confidence 211 1257889999999999989999999999999999999999998643210 0001111112222211 111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....+.++|.+||..+|++||++.|++++-..
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 228 -KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred -hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 022337899999999999999999999987544
No 276
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5e-35 Score=305.96 Aligned_cols=262 Identities=23% Similarity=0.322 Sum_probs=196.5
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|++.+.||+|++|.||+|..+ +++.||+|.+........ ...+.+|++++++++|+||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA--PFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC--chhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 367899999999999999999654 689999999875432211 24567899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++ +|.+++..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred EecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 999985 89888875443 578999999999999999999998 999999999999999999999999999876433
Q ss_pred CCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCCchhhhh---
Q 004642 608 DSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPKIMLIDV--- 674 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~~~~~~~--- 674 (740)
.........++..|+|||++.+ ..++.++||||+|+++|||++|+.||........ ...........
T Consensus 156 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 156 PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 2222223356889999999875 4578899999999999999999999864321000 00000000000
Q ss_pred ---hccc---CC-Ccchhh--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 675 ---LNQR---LS-PPVNQK--IVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 675 ---~~~~---l~-~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.... .. ...... .......+.+++.+|++.+|++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 00 000000 00011346789999999999999999999865
No 277
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=316.10 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=207.8
Q ss_pred cccccceeeecccceEEEEEEeCCCcE-EEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGKV-VALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~-vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+.|.|+..||.|+||.||++..++... .|.|++... .++....|.-|++++..++||+||++++.|+..+.++++.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 456667779999999999997665444 455666433 2344688999999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
|||.||..+..+-..+. .++..++.-+++|++.||.|||++ .|||||||..|||++.+|.++|+|||.+......
T Consensus 109 EFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST 183 (1187)
T ss_pred eecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhH
Confidence 99999999887765543 689999999999999999999999 9999999999999999999999999988654433
Q ss_pred CCcccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC-c
Q 004642 609 SSYRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP-P 682 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 682 (740)
......++||++|||||+.+ ..+|+.++||||||++|.||..+.+|-..... -..+..+....++. .
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-------MRVllKiaKSePPTLl 256 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSEPPTLL 256 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-------HHHHHHHhhcCCCccc
Confidence 34456679999999999865 56799999999999999999999999443221 11222222222211 1
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChhhh
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQKAL 730 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 730 (740)
.+.+|.. .+.+|+.+|+..+|+.||+++++++|-+....+..+..
T Consensus 257 qPS~Ws~---~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~SnK~i 301 (1187)
T KOG0579|consen 257 QPSHWSR---SFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSNKMI 301 (1187)
T ss_pred Ccchhhh---HHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcchHH
Confidence 1233333 48999999999999999999999999877655444433
No 278
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7.8e-35 Score=304.50 Aligned_cols=263 Identities=23% Similarity=0.258 Sum_probs=196.2
Q ss_pred HhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
++++|.+.+.||+|+||.||+|.. .+|+.||+|++....... ....+.+|+++++.++|+||+++++++..++..++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG--VPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC--CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 457899999999999999999954 468999999987544322 12456789999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||+. +++.+++.... ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++...
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 999996 57766664432 2467888999999999999999998 99999999999999999999999999997654
Q ss_pred cCCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCCc-------
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPKI------- 669 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~~------- 669 (740)
..........++..|+|||++.+. .++.++|||||||++|||++|+.||+....... ......
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 333333344678999999998754 478899999999999999999999874321000 000000
Q ss_pred ---hhhhhhcccCCCcchh--hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 670 ---MLIDVLNQRLSPPVNQ--KIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 670 ---~~~~~~~~~l~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
................ ........+.+++.+|+..||++|||+.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000000000000 000112347789999999999999999999875
No 279
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.1e-35 Score=307.68 Aligned_cols=262 Identities=21% Similarity=0.318 Sum_probs=195.3
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||+|... +|+.||+|++...... ......+.+|++++++++||||+++++++.+.+..++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 4788899999999999999654 6899999998754322 1223567789999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++ +|.+++..... .+++..+..++.||++||+|||+. +++||||||+||+++.++.++|+|||+++......
T Consensus 80 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 80 YCDQ-DLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred cCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 9975 77777654332 589999999999999999999998 99999999999999999999999999998664433
Q ss_pred CcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccC--------CCCCch----hhhhhc
Q 004642 610 SYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS--------SGPKIM----LIDVLN 676 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~--------~~~~~~----~~~~~~ 676 (740)
.......++..|+|||++.+. .++.++|||||||++|||+||..|+......... ...... .....+
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 333344678999999998764 4688999999999999999999985321110000 000000 000000
Q ss_pred ccCCCcch------hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 677 QRLSPPVN------QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 677 ~~l~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
....+... .........+.+++.+||+.||++|||++|++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 00000000 00001123477899999999999999999998763
No 280
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.5e-35 Score=309.63 Aligned_cols=254 Identities=26% Similarity=0.376 Sum_probs=200.6
Q ss_pred cccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|.....||+|+||.||++.. .+++.||+|++..... ...+.+.+|+.+++.++|+|++++++.+..++..++||||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ---QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH---HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 33346699999999999965 4688999999865332 2346788999999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+++++|.+++... .+++.++..++.||+.||+|||++ +++||||||+||+++.++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 101 LEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 9999999988543 478899999999999999999998 999999999999999999999999999876543333
Q ss_pred cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHH
Q 004642 611 YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQD 690 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 690 (740)
......|+..|+|||...+..++.++||||||+++|||++|+.||...... ... ..+.......... ....
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-------~~~-~~~~~~~~~~~~~-~~~~ 244 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-------QAM-RRIRDNLPPRVKD-SHKV 244 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHH-HHHHhcCCCcccc-cccc
Confidence 333456899999999998888999999999999999999999998643211 011 1111111111100 0011
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 691 IILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 691 ~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
...+.+++.+|+..||++||+++|++++-.....
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 2237789999999999999999999998655543
No 281
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.6e-35 Score=304.10 Aligned_cols=255 Identities=27% Similarity=0.408 Sum_probs=200.1
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecC---
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKK--- 522 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--- 522 (740)
++++|++.+.||+|+||.||+|..+ +++.+++|++..... ..+.+.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 5688999999999999999999764 678999999875443 236788999999999 7999999999997644
Q ss_pred ---eEEEEEEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEee
Q 004642 523 ---CMFLIYEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVAD 598 (740)
Q Consensus 523 ---~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 598 (740)
..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 4899999999999999886532 223688999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCcccccccCCCccccccccc-----cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhh
Q 004642 599 FGTARLLHVDSSYRTLRAGTYGYIAPELAYT-----IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLID 673 (740)
Q Consensus 599 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 673 (740)
||.+..............|+..|+|||++.. ..++.++|||||||++|+|++|+.||..... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~ 229 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-------MRALFK 229 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-------HHHHHH
Confidence 9999876433333344568999999998753 3467789999999999999999999864221 111111
Q ss_pred hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 674 VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 674 ~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...... +.... .......+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~~-~~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 230 IPRNPP-PTLKS-PENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhccCC-CCCCc-hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111111 11000 11112347899999999999999999999875
No 282
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.5e-35 Score=306.68 Aligned_cols=256 Identities=22% Similarity=0.287 Sum_probs=198.7
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||++... .++.||+|.+...........+.+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999654 57899999987654433344567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999996543 578999999999999999999998 9999999999999999999999999998642111
Q ss_pred CC---------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhh
Q 004642 609 SS---------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLID 673 (740)
Q Consensus 609 ~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 673 (740)
.. ......|+..|+|||++.+..++.++|+|||||++|||++|..||.... .......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~-------~~~~~~~ 227 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-------PEELFGQ 227 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHH
Confidence 00 0112357889999999988889999999999999999999999985321 1111222
Q ss_pred hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 674 VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 674 ~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
........+... ......+.+++.+||+.+|++||++.++.+.+.
T Consensus 228 ~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 228 VISDDIEWPEGD--EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHhcccCCCCcc--ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 222111111110 011223789999999999999998544444443
No 283
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.1e-35 Score=302.20 Aligned_cols=249 Identities=30% Similarity=0.450 Sum_probs=194.7
Q ss_pred eeeecccceEEEEEEeCC-------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 456 YCIGTGGYGSVYKAELPE-------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+.||+|+||.||+|...+ ++.+|+|.+...... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD--QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccch--hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 358999999999996542 357999988654322 22467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCC----ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-----cEEEeec
Q 004642 529 EYMERGSLFCVLHDDD----EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-----EASVADF 599 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-----~~kl~Df 599 (740)
||+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999999987532 123478999999999999999999998 999999999999999887 8999999
Q ss_pred ccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhc
Q 004642 600 GTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLN 676 (740)
Q Consensus 600 G~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+++........ .....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~ 227 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--------EVLQHVT 227 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--------HHHHHHh
Confidence 999765322211 122345678999999999899999999999999999998 99998643211 1111111
Q ss_pred ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 677 QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 677 ~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
............ ..+.+++.+||..+|++||++.++.+.|.
T Consensus 228 ~~~~~~~~~~~~---~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 228 AGGRLQKPENCP---DKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cCCccCCcccch---HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 111111111112 23789999999999999999999999886
No 284
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.2e-34 Score=297.27 Aligned_cols=251 Identities=29% Similarity=0.501 Sum_probs=199.9
Q ss_pred cccceeeecccceEEEEEEeCC-----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 452 FHIKYCIGTGGYGSVYKAELPE-----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
+++.+.||.|+||.||++...+ +..||+|++....... ..+.+..|++++.+++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ--QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH--HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 4567889999999999996653 4889999997654321 35788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
+|||+++++|.+++...... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 99999999999998764421 289999999999999999999998 99999999999999999999999999998765
Q ss_pred cCCCccc-ccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcch
Q 004642 607 VDSSYRT-LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVN 684 (740)
Q Consensus 607 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 684 (740)
....... ...++..|+|||.+.+..++.++||||+|+++|+|++ |+.||..... ....+.+.........
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~ 226 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGYRLPKP 226 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCCCCC
Confidence 4322221 2236789999999988889999999999999999998 7888764211 1111111111111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 685 QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 685 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.. ....+.+++.+|+..+|++|||+.|+++.|
T Consensus 227 ~~---~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 EN---CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred Cc---CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11 222388899999999999999999998764
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.8e-35 Score=307.44 Aligned_cols=254 Identities=25% Similarity=0.360 Sum_probs=200.9
Q ss_pred cceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEecc
Q 004642 454 IKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
....||+|+||.||++.. .+++.||+|.+...... ..+.+.+|+.++..++|||++++++++..++..++++||++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc---hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 345699999999999965 46899999998654322 23567889999999999999999999999999999999999
Q ss_pred CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcc
Q 004642 533 RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYR 612 (740)
Q Consensus 533 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 612 (740)
+++|..++... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....+....
T Consensus 102 ~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 174 (297)
T cd06659 102 GGALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 174 (297)
T ss_pred CCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc
Confidence 99998877542 478999999999999999999998 99999999999999999999999999987654333333
Q ss_pred cccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHH
Q 004642 613 TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDII 692 (740)
Q Consensus 613 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 692 (740)
....|+..|+|||++.+..++.++|||||||++|||++|+.||...... . ....+....... .........
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~-~~~~~~~~~~~~-~~~~~~~~~ 245 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV-------Q-AMKRLRDSPPPK-LKNAHKISP 245 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHhccCCCC-ccccCCCCH
Confidence 4457899999999999888999999999999999999999998642211 0 011111111100 000011122
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCC
Q 004642 693 LVSTIAFACLSSQPKSRPTMQRISQELLAGKTPM 726 (740)
Q Consensus 693 ~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 726 (740)
.+.+++.+||+.+|++||+++|++++-...+...
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 3788999999999999999999999876665533
No 286
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.9e-35 Score=303.02 Aligned_cols=263 Identities=27% Similarity=0.322 Sum_probs=202.4
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--cCeEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH--KKCMFL 526 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 526 (740)
++|...+.||.|++|.||++.. .+++.+|+|.+...... ....++.+|++++++++||||+++++++.+ ++..++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 3688889999999999999966 46889999998754332 335778899999999999999999998865 447899
Q ss_pred EEEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 527 IYEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
||||+++++|.+++.... ....+++..+..++.||+.||+|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 999999999988775322 233578899999999999999999998 9999999999999999999999999998765
Q ss_pred ccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 606 HVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
.... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||+..... ................. ....
T Consensus 156 ~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~ 230 (287)
T cd06621 156 VNSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP--PLGPIELLSYIVNMPNP-ELKD 230 (287)
T ss_pred cccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC--CCChHHHHHHHhcCCch-hhcc
Confidence 3221 12345788999999999888999999999999999999999998754220 00111111111111110 0000
Q ss_pred hh---HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 686 KI---VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 686 ~~---~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.. ......+.+++.+||+.+|++|||+.|++++-...
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~ 270 (287)
T cd06621 231 EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270 (287)
T ss_pred CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence 00 01123478999999999999999999999987654
No 287
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9.4e-35 Score=301.59 Aligned_cols=254 Identities=30% Similarity=0.468 Sum_probs=202.2
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC---CCccceeeeeeeecCeEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR---HRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l 526 (740)
.|++.+.||+|+||.||+|.. .+++.||+|.+...... ...+++.+|++++++++ |||++++++++..+...++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD--DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc--hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 467788899999999999965 57899999998754332 22467888999999986 9999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||+++++|.+++... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 80 v~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999988653 588999999999999999999998 99999999999999999999999999998775
Q ss_pred cCCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
..........|+..|+|||.+.+. .++.++|||||||++|+|++|+.||........ . ........+....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-------~-~~~~~~~~~~~~~ 224 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-------M-MLIPKSKPPRLED 224 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-------h-hccccCCCCCCCc
Confidence 544333445789999999988754 468899999999999999999999875322110 0 0000111111110
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
. .....+.+++.+||+.||++||++.|++++-....
T Consensus 225 ~--~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 225 N--GYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA 260 (277)
T ss_pred c--cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence 0 01233789999999999999999999998765543
No 288
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.8e-35 Score=304.93 Aligned_cols=262 Identities=22% Similarity=0.292 Sum_probs=196.8
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|++|.||+|... +|+.||+|++....... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc-ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 4788899999999999999654 68999999987544322 223578899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+. ++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 80 FLH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred ccc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 996 588888865432 3689999999999999999999998 99999999999999999999999999987654333
Q ss_pred CcccccccCCCccccccccccc-cCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCchh----hh----
Q 004642 610 SYRTLRAGTYGYIAPELAYTIV-VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKIML----ID---- 673 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~~~----~~---- 673 (740)
.......++..|+|||++.+.. ++.++||||||+++|||+||+.||........ ........ ..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 3333345788999999887644 57889999999999999999999864321100 00000000 00
Q ss_pred --hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 674 --VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 674 --~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+................+.+++.+|++.||++||+++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000000000111236789999999999999999999876
No 289
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8e-35 Score=304.49 Aligned_cols=254 Identities=25% Similarity=0.356 Sum_probs=204.1
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|.+.+.||+|+||.||++.. .+++.||+|.+...... ..+.+.+|+.++++++|||++++++++...+..++|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch---HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36889999999999999999954 46889999998643322 236788899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+||+++++|.+++.+. .+++.++..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred EecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999988653 468899999999999999999998 999999999999999999999999999876654
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhh-cccCCCcchhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVL-NQRLSPPVNQK 686 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 686 (740)
.........|++.|+|||.+.+..++.++|||||||++|++++|+.||........ ..... .........
T Consensus 168 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-------~~~~~~~~~~~~~~~-- 238 (293)
T cd06647 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-------LYLIATNGTPELQNP-- 238 (293)
T ss_pred cccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-------eeehhcCCCCCCCCc--
Confidence 43333445688999999999888889999999999999999999999875322110 00000 000000001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
......+.+++.+||..+|++||++.+++++-...
T Consensus 239 -~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~ 273 (293)
T cd06647 239 -EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (293)
T ss_pred -cccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 11122378899999999999999999999995443
No 290
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2e-34 Score=305.03 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=200.8
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|...+.||+|+||.||++.. .+|..||+|++...........+.+.+|++++++++|||++++++++.++...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 466788899999999999965 4688999999876544444445678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++ ++.+.+.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-- 177 (317)
T cd06635 106 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP-- 177 (317)
T ss_pred CCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence 9975 7777665432 2589999999999999999999998 999999999999999999999999999875432
Q ss_pred CcccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 610 SYRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||..... ......+...........
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~- 247 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNESPTLQSN- 247 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhccCCCCCCc-
Confidence 22346888999999974 45688899999999999999999999754211 111122222222111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
.....+.+++.+||+.+|++||++.++++++.....
T Consensus 248 --~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 248 --EWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred --cccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 112237899999999999999999999998876543
No 291
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=9.8e-35 Score=300.62 Aligned_cols=256 Identities=26% Similarity=0.427 Sum_probs=198.3
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCccc-------chHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETE-------DSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
+|.+.+.||+|+||.||+|.. .+|+.||+|.+...... .....+.+.+|++++++++|||++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999954 46899999988643211 1123457888999999999999999999999999
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..++||||+++++|.+++.... .+++..+..++.||+.||.|||+. +++||||+|+||+++.++.++++|||.+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999987653 588899999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCC--cccccccCCCccccccccccc--cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc
Q 004642 603 RLLHVDSS--YRTLRAGTYGYIAPELAYTIV--VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 603 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
+....... ......|+..|+|||.+.... ++.++||||+|+++||+++|..||...... ....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~ 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-------AAMFKLGNKR 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-------HHHHHhhccc
Confidence 76532211 122345788999999987654 788999999999999999999998532211 0111111111
Q ss_pred CCCcchhhh-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 679 LSPPVNQKI-VQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 679 l~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
......... ......+.+++.+||+.+|++||++.|++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHP 270 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence 111110000 11123478899999999999999999999863
No 292
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1e-34 Score=297.99 Aligned_cols=238 Identities=27% Similarity=0.423 Sum_probs=187.5
Q ss_pred eeeecccceEEEEEEeCCCc-----------EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeE
Q 004642 456 YCIGTGGYGSVYKAELPEGK-----------VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~g~-----------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (740)
+.||+|+||.||+|...+.. .+++|.+...... ...+.+|+.++++++||||+++++++.. +..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 35899999999999765433 4777776544322 4678899999999999999999999988 778
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-------cEEEe
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-------EASVA 597 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-------~~kl~ 597 (740)
++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 999999999999999876543 578999999999999999999998 999999999999999888 79999
Q ss_pred ecccceecccCCCcccccccCCCcccccccccc--ccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhh
Q 004642 598 DFGTARLLHVDSSYRTLRAGTYGYIAPELAYTI--VVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDV 674 (740)
Q Consensus 598 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 674 (740)
|||++..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||..... .......
T Consensus 151 Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-------~~~~~~~ 219 (259)
T cd05037 151 DPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-------SEKERFY 219 (259)
T ss_pred CCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-------hhHHHHH
Confidence 9999986543 2233567789999998876 78899999999999999999 5677654321 0000011
Q ss_pred hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 675 LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 675 ~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
......+ .. ....+.+++.+||..+|++||++.|+++.|.
T Consensus 220 ~~~~~~~-~~-----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 220 QDQHRLP-MP-----DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hcCCCCC-CC-----CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111111 10 0134889999999999999999999998863
No 293
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.2e-34 Score=302.26 Aligned_cols=258 Identities=29% Similarity=0.417 Sum_probs=207.8
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
.++.|++.+.||+|++|.||+|... +++.|++|++..... ..+.+.+|++++++++|+|++++++++...+..++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 4567888899999999999999765 688999999976443 24678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
++||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999998654 3689999999999999999999998 99999999999999999999999999987654
Q ss_pred cCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
..........++..|+|||++.+..++.++|||||||++|+|++|+.||...... .....+...........
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~- 239 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-------RALFLITTKGIPPLKNP- 239 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcCCCCCcch-
Confidence 3322223345788999999998888999999999999999999999997643211 11111111111111100
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
......+.+++.+|++.+|.+||++.+++++....+
T Consensus 240 -~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 240 -EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred -hhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 001123789999999999999999999998776554
No 294
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9e-35 Score=299.11 Aligned_cols=250 Identities=26% Similarity=0.373 Sum_probs=201.8
Q ss_pred eecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||.|+||.||++... +++.||+|++...........+.+.+|++++++++||||+++++++.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999664 4899999999765554444567899999999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccc
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRA 616 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 616 (740)
.+++.+.. .+++..+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 99997643 478899999999999999999998 99999999999999999999999999998765332 223346
Q ss_pred cCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHH
Q 004642 617 GTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVST 696 (740)
Q Consensus 617 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 696 (740)
|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||..... ..................+... ...+.+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 225 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-----DPMEIYNDILKGNGKLEFPNYI---DKAAKD 225 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-----CHHHHHHHHhccCCCCCCCccc---CHHHHH
Confidence 88999999999888899999999999999999999999865321 1111122222111111111111 234889
Q ss_pred HHHHcccCCCCCCCC-----HHHHHHHHHcC
Q 004642 697 IAFACLSSQPKSRPT-----MQRISQELLAG 722 (740)
Q Consensus 697 li~~cl~~dP~~RPs-----~~ev~~~L~~~ 722 (740)
++.+||+.+|++||+ ++|++++-...
T Consensus 226 ~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 256 (262)
T cd05572 226 LIKQLLRRNPEERLGNLKGGIKDIKKHKWFN 256 (262)
T ss_pred HHHHHccCChhhCcCCcccCHHHHhcChhhh
Confidence 999999999999999 88888866543
No 295
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.9e-35 Score=301.04 Aligned_cols=251 Identities=25% Similarity=0.333 Sum_probs=203.4
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++++++||||+++++++.+++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788999999999999999665 589999999986554443456789999999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999998764 2688999999999999999999998 99999999999999999999999999997664332
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... ........... .....+...
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~-- 225 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-----IRDQIRAKQET-ADVLYPATW-- 225 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-----HHHHHHHHhcc-ccccCcccC--
Confidence 223456888999999998888999999999999999999999998753320 01111111111 111111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCH--HHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTM--QRISQ 717 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~--~ev~~ 717 (740)
...+.+++.+||+.||++||++ +|+++
T Consensus 226 -~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 226 -STEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred -cHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 1347899999999999999999 77654
No 296
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.3e-34 Score=301.78 Aligned_cols=259 Identities=24% Similarity=0.348 Sum_probs=204.0
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|...+.||+|++|.||++.. .+++.+++|++..... ...+.+.+|+.+++.++|||++++++++..++..++++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 344457899999999999964 4788999998864332 223568899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 97 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 97 FLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred ccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99999999988762 578899999999999999999998 99999999999999999999999999887654333
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.......|+..|+|||...+..++.++|||||||++|||++|+.||..... .... ..+.....+... ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-------~~~~-~~~~~~~~~~~~-~~~~ 240 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-------LQAM-KRIRDNLPPKLK-NLHK 240 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-------HHHH-HHHHhcCCCCCc-cccc
Confidence 333345689999999999888899999999999999999999999754221 1111 111111111110 0111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChh
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQK 728 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 728 (740)
....+.+++.+||+.+|++||++.+++++-...+...++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 279 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcc
Confidence 123488999999999999999999999876665444333
No 297
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1e-34 Score=302.37 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=196.0
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHH-HhccCCCccceeeeeeeecCeEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHV-LSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
++|++.+.||+|+||.||++... +|+.||+|++........ ..++..|... ++..+|||++++++++..++..+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 46889999999999999999654 699999999876543322 2345556554 5667899999999999999999999
Q ss_pred EEeccCCCchhhhcCC-CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 528 YEYMERGSLFCVLHDD-DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|||++ |+|.+++... .....+++..+..++.||+.||+|||++ .+++||||||+||+++.++.+||+|||.++...
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 99997 5787776542 2234689999999999999999999974 289999999999999999999999999998654
Q ss_pred cCCCcccccccCCCccccccccc----cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYT----IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
.. .......|+..|+|||.+.+ ..++.++|+||+||++|||++|+.||..... ................
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~ 228 (283)
T cd06617 156 DS-VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT------PFQQLKQVVEEPSPQL 228 (283)
T ss_pred cc-cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc------CHHHHHHHHhcCCCCC
Confidence 22 22233468899999998865 4467899999999999999999999863211 0011112221111110
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
...... ..+.+++.+||+.+|++||++.+++++-...+.
T Consensus 229 ~~~~~~---~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 229 PAEKFS---PEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred CccccC---HHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 001111 237899999999999999999999987655543
No 298
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8e-35 Score=298.49 Aligned_cols=252 Identities=22% Similarity=0.364 Sum_probs=201.3
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||+|... +|..+|+|.+....... ...+.+.+|+++++.++|+|++++++.+..++..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4778899999999999999654 58899999987643222 224677899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-cEEEeecccceecccC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-EASVADFGTARLLHVD 608 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~DfG~a~~~~~~ 608 (740)
|+++++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++ .++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 80 YCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999999876432 2578999999999999999999998 999999999999999886 4699999999876543
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........|++.|+|||+..+..++.++||||||+++|||++|+.||..... ................ .
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~-~--- 224 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-------HQLVLKICQGYFAPIS-P--- 224 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHhcccCCCCC-C---
Confidence 3333334688999999999888899999999999999999999999864221 1112222222211111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.....+.+++.+|+..+|++||++.|++++
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111237899999999999999999999876
No 299
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.3e-35 Score=300.72 Aligned_cols=239 Identities=23% Similarity=0.407 Sum_probs=186.4
Q ss_pred eeecccceEEEEEEeCC--------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 457 CIGTGGYGSVYKAELPE--------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.||+|+||.||+|.... ...||+|.+.... ....+.+.+|+.+++.++|||++++++++..++..++||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 58999999999996532 2347888775432 233467888999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc--------EEEeecc
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE--------ASVADFG 600 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~--------~kl~DfG 600 (740)
||+++|+|.++++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. ++++|||
T Consensus 79 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 79 EYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred ecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 99999999999976543 578999999999999999999998 9999999999999987765 6999999
Q ss_pred cceecccCCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCC-CCCCcccccccCCCCCchhhhhhccc
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGT-HPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.+..... .....++..|+|||++.+. .++.++|||||||++|||++|. .|+..... ..........
T Consensus 154 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~ 221 (258)
T cd05078 154 ISITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS--------QKKLQFYEDR 221 (258)
T ss_pred cccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH--------HHHHHHHHcc
Confidence 9865432 1234678899999998864 5788999999999999999995 55443211 0111111111
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
...+. .....+.+++.+||+.+|++||+++++++.|.
T Consensus 222 ~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 HQLPA-----PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccCCC-----CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111 11123789999999999999999999999863
No 300
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.2e-34 Score=302.36 Aligned_cols=262 Identities=24% Similarity=0.334 Sum_probs=200.0
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||+|.. .+|+.||+|++....... ...+.+.+|++++++++|||++++++++..+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 478889999999999999965 468999999987654322 234678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+ +++|.+++.... ..+++.++..++.||+.||+|||+. +++|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99 999999987544 3589999999999999999999998 99999999999999999999999999998765332
Q ss_pred C-cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCch---------
Q 004642 610 S-YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIM--------- 670 (740)
Q Consensus 610 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~--------- 670 (740)
. ......|+..|+|||.+.+. .++.++||||+|+++|||++|+.||........ .......
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 1 12334689999999998654 468899999999999999999887754321000 0000000
Q ss_pred hhhhhcccCCC-cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 671 LIDVLNQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 671 ~~~~~~~~l~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
........... ............+.+++.+|++.+|++||++++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00000000000 00000011124488999999999999999999999874
No 301
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.2e-34 Score=302.48 Aligned_cols=262 Identities=28% Similarity=0.347 Sum_probs=199.8
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|+||.||+|..+ +++.||+|+++..... ....+.+.+|++++++++|+||+++++++..++..+++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 36889999999999999999665 5889999998754332 233467889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||++++.+..+..... .+++.++..++.||+.|++|||+. +++|+||+|+||++++++.+||+|||.+......
T Consensus 80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 80 EYVERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred ecCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9999877766554432 478999999999999999999998 9999999999999999999999999999876544
Q ss_pred CC-cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchh-----hh
Q 004642 609 SS-YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIML-----ID 673 (740)
Q Consensus 609 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~-----~~ 673 (740)
.. ......++..|+|||++.+. .++.++||||||+++|+|++|+.||........ ........ ..
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 32 22334678899999999887 788999999999999999999999864321000 00000000 00
Q ss_pred hhcc-cCCCcc-hh----hhH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 674 VLNQ-RLSPPV-NQ----KIV-QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 674 ~~~~-~l~~~~-~~----~~~-~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.... ...... .. ... .....+.+++.+||..+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000 000000 00 000 012348899999999999999999999875
No 302
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8.7e-35 Score=304.46 Aligned_cols=260 Identities=22% Similarity=0.267 Sum_probs=198.0
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCMFL 526 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 526 (740)
++|++.+.||+|+||.||+|... +++.+|+|.++..... ......+.+|++++.+++||||+++++++... +..++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 57888999999999999999765 5889999999755433 22334667899999999999999999999877 88999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||+++ +|.+++..... .+++.++..++.||+.||+|||+. +++|+||||+||+++.++.++|+|||.+....
T Consensus 84 v~e~~~~-~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVEH-DLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcCc-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999985 88888865432 589999999999999999999998 99999999999999999999999999998765
Q ss_pred cCCCcccccccCCCccccccccccc-cCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhh-----
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIV-VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLI----- 672 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~----- 672 (740)
..........++..|+|||.+.+.. ++.++|+||+|+++|||++|+.||........ .........
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 4333333446788999999987644 68899999999999999999999864321100 000000000
Q ss_pred ---------hhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 673 ---------DVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 673 ---------~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
......+....... .....+.+++.+||+.+|++||++.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPAL--SLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhcccccc--CCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000000000 012337789999999999999999999875
No 303
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.8e-34 Score=297.29 Aligned_cols=256 Identities=26% Similarity=0.407 Sum_probs=196.7
Q ss_pred cccceeeecccceEEEEEEeC----CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-----
Q 004642 452 FHIKYCIGTGGYGSVYKAELP----EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK----- 522 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 522 (740)
|.+.+.||+|+||.||+|.+. +++.||+|++....... ...+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 567788999999999999643 46889999997654332 23567889999999999999999999886532
Q ss_pred -eEEEEEEeccCCCchhhhcCC---CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEee
Q 004642 523 -CMFLIYEYMERGSLFCVLHDD---DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVAD 598 (740)
Q Consensus 523 -~~~lv~e~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 598 (740)
..++++||+++|+|.+++... .....+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 347899999999998877432 1223578999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCc--ccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhh
Q 004642 599 FGTARLLHVDSSY--RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVL 675 (740)
Q Consensus 599 fG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 675 (740)
||.++........ .....++..|++||......++.++|||||||++|||++ |+.||..... ......+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNYL 228 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHHH
Confidence 9999865432221 122345678999999988888999999999999999999 8888754221 1111111
Q ss_pred cccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 676 NQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 676 ~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.......... .....+.+++.+||+.+|++||++.|+++.|...
T Consensus 229 ~~~~~~~~~~---~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 229 IKGNRLKQPP---DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HcCCcCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1110000001 1123488999999999999999999999999753
No 304
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=317.43 Aligned_cols=251 Identities=27% Similarity=0.458 Sum_probs=204.4
Q ss_pred cccceeeecccceEEEEE-EeCCCc----EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 452 FHIKYCIGTGGYGSVYKA-ELPEGK----VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~-~~~~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
....++||+|+||+||+| ..++|+ +||+|++....... ..+++..|+-.|.+++|||+++++|+|.... ..|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~--~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK--ASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCch--hhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 344678999999999999 445554 58888887654443 2478999999999999999999999998776 889
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|++|++.|+|.++++..+. .+-....+.+..|||+||.|||++ +++||||..+|||+..-..+||.|||+++...
T Consensus 775 vtq~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 9999999999999987654 467788999999999999999999 99999999999999999999999999999887
Q ss_pred cCCCccccccc--CCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhccc--CCC
Q 004642 607 VDSSYRTLRAG--TYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQR--LSP 681 (740)
Q Consensus 607 ~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--l~~ 681 (740)
.+........| .+.|||=|.+....|+.++|||||||++||++| |..|++.... ..+.+.+... ++.
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--------~eI~dlle~geRLsq 921 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--------EEIPDLLEKGERLSQ 921 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--------HHhhHHHhccccCCC
Confidence 76655444333 578999999999999999999999999999998 9999775432 1122222222 332
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
+. -+..-+..++.+||..|++.||+|+++...+.+-.
T Consensus 922 Pp-----iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 922 PP-----ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred CC-----CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 22 22233778999999999999999999999986643
No 305
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.4e-34 Score=301.55 Aligned_cols=262 Identities=21% Similarity=0.302 Sum_probs=198.7
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|++|.||+|... +|+.||+|++....... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG--TPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc--chHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4788999999999999999764 68999999997654322 23567789999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++ +|.+++........+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9985 8888876654444689999999999999999999998 99999999999999999999999999997654333
Q ss_pred CcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhhhhh-----
Q 004642 610 SYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLIDVL----- 675 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~~~~----- 675 (740)
.......++..|+|||++.+. .++.++|||||||++|+|++|+.||........ ............
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 333334678899999988654 468899999999999999999999864321100 000000000000
Q ss_pred cccCCCcc----hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 676 NQRLSPPV----NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 676 ~~~l~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
....+... ..........+.+++.+|++.||++||+++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000 00000112347799999999999999999999865
No 306
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.8e-35 Score=329.99 Aligned_cols=255 Identities=27% Similarity=0.421 Sum_probs=194.6
Q ss_pred HHhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec----
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK---- 521 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 521 (740)
....+|+..+.||+||||.||+++.+ ||+.||||++.... .+ .....+.+|+..+++++|||||+++..+.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~-~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SD-KLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HH-HHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 45678888999999999999999765 89999999998876 32 3356788999999999999999998655321
Q ss_pred --------------------------------------------------------------------------------
Q 004642 522 -------------------------------------------------------------------------------- 521 (740)
Q Consensus 522 -------------------------------------------------------------------------------- 521 (740)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHH
Q 004642 522 -----------------------------------KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALS 566 (740)
Q Consensus 522 -----------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~ 566 (740)
-..||-||||+...+.+++++..-.. .....++++++|+.||+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLA 711 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHH
Confidence 01478889998878877777654211 35678899999999999
Q ss_pred HHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc------------------cCCCcccccccCCCcccccccc
Q 004642 567 YLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH------------------VDSSYRTLRAGTYGYIAPELAY 628 (740)
Q Consensus 567 ~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~------------------~~~~~~~~~~gt~~y~aPE~~~ 628 (740)
|+|++ |+|||||||.||++++++.|||+|||+|+... .+....+..+||.-|+|||++.
T Consensus 712 YIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999 99999999999999999999999999998721 0112345568999999999988
Q ss_pred ccc---cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCC
Q 004642 629 TIV---VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQ 705 (740)
Q Consensus 629 ~~~---~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~d 705 (740)
+.. |+.|+|+||+|+|++||+ +||+..- .+...+...-+..++.+ .....+....-.++|.++++.|
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsM------ERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hd 858 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEML---YPFGTSM------ERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHD 858 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHh---ccCCchH------HHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCC
Confidence 654 999999999999999998 4555311 11122222222333322 1223333334568999999999
Q ss_pred CCCCCCHHHHHHH
Q 004642 706 PKSRPTMQRISQE 718 (740)
Q Consensus 706 P~~RPs~~ev~~~ 718 (740)
|.+||||.|+++.
T Consensus 859 P~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 859 PSKRPTATELLNS 871 (1351)
T ss_pred CccCCCHHHHhhc
Confidence 9999999998753
No 307
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.1e-34 Score=299.06 Aligned_cols=252 Identities=21% Similarity=0.241 Sum_probs=191.2
Q ss_pred eeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHh---ccCCCccceeeeeeeecCeEEEEEEecc
Q 004642 457 CIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLS---TVRHRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
.||+|+||.||++.. .+|+.||+|.+.............+.+|..+++ ..+|||++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 389999999999965 468999999887654332222233444444333 3479999999999999999999999999
Q ss_pred CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcc
Q 004642 533 RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYR 612 (740)
Q Consensus 533 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 612 (740)
+++|.+++...+ .+++.++..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++...... ..
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~ 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc--Cc
Confidence 999998886543 589999999999999999999998 9999999999999999999999999998755322 22
Q ss_pred cccccCCCcccccccc-ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHH
Q 004642 613 TLRAGTYGYIAPELAY-TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDI 691 (740)
Q Consensus 613 ~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 691 (740)
....|+..|+|||... +..++.++||||+||++|||++|+.||..... .......... .......+. ...
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~-~~~~~~~~~---~~~ 223 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDRMT-LTVNVELPD---SFS 223 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC-----cCHHHHHHHh-hcCCcCCcc---ccC
Confidence 2346899999999886 45678899999999999999999999864321 0001111111 111111111 112
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHHHHHcCCCC
Q 004642 692 ILVSTIAFACLSSQPKSRP-----TMQRISQELLAGKTP 725 (740)
Q Consensus 692 ~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~~~~~ 725 (740)
..+.+++.+|++.||++|| +++|++++......+
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 3378999999999999999 699999997766543
No 308
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.4e-34 Score=298.61 Aligned_cols=248 Identities=21% Similarity=0.333 Sum_probs=184.7
Q ss_pred eeecccceEEEEEEeCCC---cEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 457 CIGTGGYGSVYKAELPEG---KVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
.||+|+||.||++...++ ..+++|.+...... ...+.+.+|+.+++.++||||+++++.+......++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASS--KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCCh--HHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 589999999999965443 34566766543322 2347889999999999999999999999999999999999999
Q ss_pred CCchhhhcCCCc-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC--
Q 004642 534 GSLFCVLHDDDE-AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS-- 610 (740)
Q Consensus 534 g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-- 610 (740)
|+|.++++.... ....++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999976432 23467777889999999999999998 999999999999999999999999999864322111
Q ss_pred cccccccCCCccccccccc-------cccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhccc----
Q 004642 611 YRTLRAGTYGYIAPELAYT-------IVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQR---- 678 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 678 (740)
......++..|+|||+... ..++.++|||||||++|||++ |..||..... .......+...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~ 229 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-------REVLNHVIKDQQVKL 229 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhhccccc
Confidence 1233467889999998753 245778999999999999997 5667653221 01111111110
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
..+..... ....+.+++..|| .+|++||+++|+++.|.
T Consensus 230 ~~~~~~~~---~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLELP---YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCCC---CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 01111111 1223677889999 67999999999999874
No 309
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.4e-34 Score=300.24 Aligned_cols=252 Identities=25% Similarity=0.285 Sum_probs=196.2
Q ss_pred eecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||+|+||+||++.. .+|+.||+|.+.............+..|++++++++|||++++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999954 46899999998754433333345677899999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccc
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRA 616 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 616 (740)
.+++..... ..+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+...... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 999876443 3588999999999999999999998 9999999999999999999999999998765432 2223346
Q ss_pred cCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHH
Q 004642 617 GTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVST 696 (740)
Q Consensus 617 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 696 (740)
++..|+|||+..+..++.++||||+||++|+|++|+.||...... .....+....... ........ ...+.+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~---~~~~~~ 227 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK----VEKEELKRRTLEM-AVEYPDKF---SPEAKD 227 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc----ccHHHHHhccccc-cccCCccC---CHHHHH
Confidence 788999999998888999999999999999999999998643210 0000111111100 11111111 223789
Q ss_pred HHHHcccCCCCCCC-----CHHHHHHHHHcC
Q 004642 697 IAFACLSSQPKSRP-----TMQRISQELLAG 722 (740)
Q Consensus 697 li~~cl~~dP~~RP-----s~~ev~~~L~~~ 722 (740)
++.+||+.+|++|| ++.+++++-...
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~ 258 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVREHPLFK 258 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHhChhhh
Confidence 99999999999999 777787765443
No 310
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.3e-34 Score=293.06 Aligned_cols=252 Identities=28% Similarity=0.424 Sum_probs=205.6
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCMFLI 527 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 527 (740)
+|...+.||+|++|.||+|... +++.|++|++...... ....+.+.+|++++++++||||+++++.+... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4777899999999999999665 6899999999765533 33457889999999999999999999999988 899999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
+||+++++|.+++.... .+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999987654 689999999999999999999998 999999999999999999999999999987754
Q ss_pred CCC--cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 608 DSS--YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 608 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
... ......++..|+|||...+...+.++||||||+++|+|++|..||..... .................+.
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN------PMAALYKIGSSGEPPEIPE 227 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHhccccCCCcCCCc
Confidence 432 13345688999999999888899999999999999999999999875331 0111111111111111111
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.. ...+.+++.+|++.+|++||++.|++++
T Consensus 228 ~~---~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 228 HL---SEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cc---CHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 11 2348899999999999999999999876
No 311
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.7e-34 Score=300.59 Aligned_cols=261 Identities=23% Similarity=0.289 Sum_probs=196.5
Q ss_pred cccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|++.+.||.|++|.||+|.. .+|+.||+|++....... ...+.+.+|++++++++|||++++++++.+++..+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 66788999999999999965 479999999987543222 2235678899999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
++ ++|.+++..... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 80 LD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 95 589888865442 3589999999999999999999998 999999999999999999999999999976543322
Q ss_pred cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCch-------hhhh-
Q 004642 611 YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKIM-------LIDV- 674 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~~-------~~~~- 674 (740)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||........ ....... ..+.
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 22333568899999987664 468899999999999999999999864322100 0000000 0000
Q ss_pred --hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 675 --LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 675 --~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...................+.+++.+|++.+|++||+++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000000001111347799999999999999999999875
No 312
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.2e-34 Score=301.81 Aligned_cols=264 Identities=21% Similarity=0.249 Sum_probs=195.5
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCe----
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKC---- 523 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~---- 523 (740)
++|++.+.||+|+||.||+|... +|+.||+|++....... .....+.+|++++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-GIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-CCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 46888999999999999999654 68999999887643322 22356788999999995 6999999999887665
Q ss_pred -EEEEEEeccCCCchhhhcCCCc--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCcEEEeec
Q 004642 524 -MFLIYEYMERGSLFCVLHDDDE--AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-NLEASVADF 599 (740)
Q Consensus 524 -~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Df 599 (740)
.++||||+++ ++.+++..... ...+++..+..++.||+.||+|||+. +++||||||+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999986 78887764332 23589999999999999999999998 9999999999999998 889999999
Q ss_pred ccceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCcccccccC--------CCCCch
Q 004642 600 GTARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS--------SGPKIM 670 (740)
Q Consensus 600 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~--------~~~~~~ 670 (740)
|.++.+...........+++.|+|||++.+ ..++.++||||||+++|+|++|..||......... ......
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999866433332333457889999998865 45788999999999999999999998643221100 000000
Q ss_pred hhhh------h-cccCCCcc-hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 671 LIDV------L-NQRLSPPV-NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 671 ~~~~------~-~~~l~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.... . .+...+.. ..........+.+++.+||+.+|++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0 00000000 00001122347899999999999999999999876
No 313
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.2e-35 Score=305.44 Aligned_cols=253 Identities=25% Similarity=0.374 Sum_probs=210.6
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
...|.+...||+|.|+.|..+.+ .+|..||+|.+.+........ +.+.+|+++|..+.|||||+++.+...+..+|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~-~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKR-QKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHH-HHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 45688899999999999999954 479999999998876655443 4488999999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+.+|.+++++...+ .+....+..++.|+.+|++|||++ .|+|||||++|||++.+.++||+|||++.++..
T Consensus 134 ~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999998876 345578888999999999999999 999999999999999999999999999998874
Q ss_pred CCCcccccccCCCccccccccccccC-CcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVT-GKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
. ......+|++.|.|||++.+..|. +++|+||+|+++|-|+.|..||+.... ......++....+.+....
T Consensus 208 ~-~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-------k~Lr~rvl~gk~rIp~~ms 279 (596)
T KOG0586|consen 208 G-LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-------KELRPRVLRGKYRIPFYMS 279 (596)
T ss_pred c-ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------ccccchheeeeecccceee
Confidence 3 334456999999999999988765 689999999999999999999985332 1111233333344333321
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.. ..+++.+++-.+|.+|++.+++.++-+.
T Consensus 280 ~d-----ce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 280 CD-----CEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred ch-----hHHHHHHhhccCccccCCHHHhhhhccc
Confidence 22 5689999999999999999999987654
No 314
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=278.67 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=198.7
Q ss_pred ccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEe
Q 004642 453 HIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
+....||.|..|.||+++.+ +|...|||.+...... +..+++...+.++..- .+|+||+.+|||..+..+++.||.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk--ee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH--HHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 34556999999999999665 5899999999876543 3357777777777666 489999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
|.. ..+.++....+ ++++.-+-++...+.+||.||.+++ +|+|||+||+|||+|+.|++|++|||++-++.. +.
T Consensus 173 Ms~-C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd-Sk 246 (391)
T KOG0983|consen 173 MST-CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD-SK 246 (391)
T ss_pred HHH-HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec-cc
Confidence 864 56666655443 4777777889999999999998763 999999999999999999999999999988753 44
Q ss_pred cccccccCCCccccccccc---cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 611 YRTLRAGTYGYIAPELAYT---IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
..+...|-+.|||||.+.- ..|+-++||||||+.++|+.||+.||.... ...+.+..+++... +..+..
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~------tdFe~ltkvln~eP-P~L~~~- 318 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK------TDFEVLTKVLNEEP-PLLPGH- 318 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC------ccHHHHHHHHhcCC-CCCCcc-
Confidence 4455589999999998864 357889999999999999999999986522 23344555555333 222111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
..-...+.+++..|+++|+.+||...++++|-..
T Consensus 319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi 352 (391)
T KOG0983|consen 319 MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFI 352 (391)
T ss_pred cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcce
Confidence 1123348899999999999999999999988653
No 315
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=7.7e-34 Score=289.87 Aligned_cols=250 Identities=31% Similarity=0.464 Sum_probs=202.8
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|++|.||++... +++.+++|++..... ...+.+.+|++++++++|++++++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4778899999999999999765 688999999976554 234788899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred cCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 999999999987653 3689999999999999999999998 99999999999999999999999999998765433
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
. .....++..|+|||++.+..++.++||||||+++|+|++|+.||..... ......... ...+.... ...
T Consensus 153 ~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~~~~~~-~~~ 222 (253)
T cd05122 153 A-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-------MKALFKIAT-NGPPGLRN-PEK 222 (253)
T ss_pred c-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-------HHHHHHHHh-cCCCCcCc-ccc
Confidence 2 3345688999999999888889999999999999999999999864321 011111111 11111100 000
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
....+.+++.+||+.||++||++.|++++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 12338899999999999999999999875
No 316
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.6e-34 Score=302.12 Aligned_cols=272 Identities=27% Similarity=0.331 Sum_probs=202.6
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCMF 525 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 525 (740)
.++|++.+.||+|+||.||+|.. .+|+.||+|++....... .....+.+|++++++++|+|++++++++... +..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 46899999999999999999965 468999999987543322 1123456799999999999999999998764 5689
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+||||+++ +|.+++.... ..+++.++..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 85 lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 99999975 7877776543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCchhhhhhc-
Q 004642 606 HVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKIMLIDVLN- 676 (740)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~~- 676 (740)
...........++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ............+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 543333333356788999999875 4578899999999999999999999864332100 0000000000000
Q ss_pred ------ccCCCc---c-hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCCh
Q 004642 677 ------QRLSPP---V-NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQ 727 (740)
Q Consensus 677 ------~~l~~~---~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 727 (740)
...... . ..........+.+++.+|++.||++||++.|++++-...+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP 299 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence 000000 0 00000012336789999999999999999999999888766554
No 317
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.4e-34 Score=302.60 Aligned_cols=264 Identities=24% Similarity=0.332 Sum_probs=195.6
Q ss_pred ccccceeeecccceEEEEEEeC---CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP---EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCMF 525 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 525 (740)
+|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++.+++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999654 4789999999874422223346678899999999999999999999988 8899
Q ss_pred EEEEeccCCCchhhhcCCC--ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC----CCcEEEeec
Q 004642 526 LIYEYMERGSLFCVLHDDD--EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS----NLEASVADF 599 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~----~~~~kl~Df 599 (740)
+||||+++ ++.+++.... ....++...+..++.||+.||+|||+. +++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 5666654322 223688999999999999999999998 9999999999999999 999999999
Q ss_pred ccceecccCCC---cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCC--CCchhhh
Q 004642 600 GTARLLHVDSS---YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSG--PKIMLID 673 (740)
Q Consensus 600 G~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~--~~~~~~~ 673 (740)
|++........ ......++..|+|||++.+. .++.++|||||||++|+|++|+.||.....-..... ......+
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986543222 12234678899999988764 578899999999999999999999864332110000 0000000
Q ss_pred h---h-----------------------cccCCCc--chhhhH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 674 V---L-----------------------NQRLSPP--VNQKIV----QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 674 ~---~-----------------------~~~l~~~--~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
+ + ....... ...... .....+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 0 0000000 000000 122347899999999999999999999876
No 318
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=8.1e-34 Score=292.37 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=198.7
Q ss_pred cccccceeeecccceEEEEEEe-CCCcEEEEEEccCCc--ccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSE--TEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCM 524 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 524 (740)
.+|++.+.||+|+||.||+|.. .+|+.||+|.+.... .......+.+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788999999999999999965 468999999875432 12233457889999999999999999999998764 568
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999887543 478889999999999999999998 999999999999999999999999999986
Q ss_pred cccCC---CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDS---SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
..... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||..... .............+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~ 228 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-------MAAIFKIATQPTKP 228 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-------HHHHHHHHcCCCCC
Confidence 53211 111234688999999999888889999999999999999999999864221 11122222222222
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
..+. .....+.+++.+|+. +|.+||++.++++|.
T Consensus 229 ~~p~---~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 229 MLPD---GVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred CCCc---ccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 1111 122338899999999 579999999988753
No 319
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.8e-34 Score=298.40 Aligned_cols=266 Identities=22% Similarity=0.303 Sum_probs=197.0
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|++.+.||+|++|.||+|... +|+.||+|++....... ...+.+.+|++++++++||||+++++++..+...++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-cchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 47889999999999999999654 68999999986543322 23456788999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCcEEEeecccceeccc
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-NLEASVADFGTARLLHV 607 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~DfG~a~~~~~ 607 (740)
||+++ ++.+++..... ..+++..+..++.||+.||+|||++ +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 81 e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 81 EYLDL-DLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ecccc-cHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 99964 77777654332 2467888889999999999999998 9999999999999985 55799999999976543
Q ss_pred CCCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCC-C------chhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGP-K------IMLI 672 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~-~------~~~~ 672 (740)
.........++..|+|||++.+. .++.++||||+||++|+|+||+.||........ .... . ..+.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 33333334678899999988664 578899999999999999999999864321100 0000 0 0000
Q ss_pred hhhc--ccCCC-cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 673 DVLN--QRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 673 ~~~~--~~l~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
+... ..... ............+.+++.+|++.+|++||++.+++++-..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~ 287 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYF 287 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchH
Confidence 0000 00000 0000001112337889999999999999999999987543
No 320
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.6e-34 Score=301.63 Aligned_cols=260 Identities=26% Similarity=0.305 Sum_probs=195.1
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 528 (740)
+|...+.||+|+||.||++.. .+|+.||+|++...... .....+.+|+.++.++. |+||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 455667899999999999955 46899999998754433 23467889999999996 999999999999999999999
Q ss_pred EeccCCCchhh---hcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 529 EYMERGSLFCV---LHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 529 e~~~~g~L~~~---l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
||+.. ++.++ +... ....+++..+..++.|++.||+|||+. .+++||||||+||+++.++.++|+|||+++..
T Consensus 83 e~~~~-~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 99875 44433 2221 123689999999999999999999963 28999999999999999999999999999765
Q ss_pred ccCCCcccccccCCCcccccccccc---ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCc
Q 004642 606 HVDSSYRTLRAGTYGYIAPELAYTI---VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPP 682 (740)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 682 (740)
.... ......|+..|+|||++.+. .++.++||||+||++|||++|+.||...... .....+......+..
T Consensus 159 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~ 231 (288)
T cd06616 159 VDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV------FDQLTQVVKGDPPIL 231 (288)
T ss_pred ccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH------HHHHhhhcCCCCCcC
Confidence 4322 22333688999999998766 6888999999999999999999998643210 011111111110000
Q ss_pred chhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 683 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 683 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
...........+.+++.+||+.+|++||++.|++++-....
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 232 SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 00000112234889999999999999999999999866543
No 321
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=9e-34 Score=290.53 Aligned_cols=253 Identities=26% Similarity=0.407 Sum_probs=205.6
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|.+.+.||.|+||.||++... +++.||+|++...... ....+.+.+|++++++++|||++++++.+..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 4788899999999999999654 6899999999765432 2335678899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 530 YMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
|+++++|.+++.... ....+++.++..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999887642 124689999999999999999999998 9999999999999999999999999999876544
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
........|++.|+|||...+..++.++||||+|+++|+|++|+.||..... .............+ .....
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~-~~~~~- 227 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-------LELALKILKGQYPP-IPSQY- 227 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-------HHHHHHHhcCCCCC-CCCCC-
Confidence 3333445788999999999888899999999999999999999999864321 11111222211111 11111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+.+++.+||..+|++||++.|++++
T Consensus 228 --~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 228 --SSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred --CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2237899999999999999999999875
No 322
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=8.6e-34 Score=304.91 Aligned_cols=263 Identities=22% Similarity=0.279 Sum_probs=198.2
Q ss_pred HhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec-----
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK----- 521 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (740)
..++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN-VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC-hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 457899999999999999999954 47899999998654322 22345677899999999999999999988643
Q ss_pred -CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 522 -KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 522 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
...++||||+.+ +|.+.+.. .++..++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 357999999965 77777653 278889999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCC----
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPK---- 668 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~---- 668 (740)
+++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||........ .....
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 164 LARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred cceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 998764322 22334678999999999999999999999999999999999999864321000 00000
Q ss_pred ---chhhhhhcccC---------------CCcch-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 669 ---IMLIDVLNQRL---------------SPPVN-QKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 669 ---~~~~~~~~~~l---------------~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
........... .+... .........+.+++.+||+.||++||++.|++++-..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~ 314 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYI 314 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhH
Confidence 00000011000 00000 0000122347899999999999999999999998643
No 323
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.6e-34 Score=299.37 Aligned_cols=257 Identities=25% Similarity=0.359 Sum_probs=200.5
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
+.|+..+.||+|+||.||+|... +++.+|+|.+...........+++.+|+++++.++|+|++++++++..+...++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 45777788999999999999654 67889999986543333334567889999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+. |++.+.+..... .+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9997 577776654332 478999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCcccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 609 SSYRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
....|+..|+|||++. ...++.++|||||||++|+|++|+.||..... ............+.....
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~ 237 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNESPALQSG 237 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-------HHHHHHHhhcCCCCcCcc
Confidence 2336788999999875 34678899999999999999999999754221 111111111111111111
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCC
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPM 726 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 726 (740)
.....+.+++.+||+.+|++||++.+++++....+...
T Consensus 238 ---~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 238 ---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred ---cccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 12233789999999999999999999999987665433
No 324
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.1e-34 Score=295.36 Aligned_cols=247 Identities=27% Similarity=0.384 Sum_probs=197.3
Q ss_pred eecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||+|+||.||++... +|+.|++|.+...........+.+.+|++++++++|||++++++.+..+...+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999765 4899999999766554445567889999999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC------
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS------ 610 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~------ 610 (740)
.+++.... .+++..+..++.||+.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99997644 589999999999999999999998 999999999999999999999999999876543311
Q ss_pred --cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 611 --YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 611 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
......++..|+|||.......+.++||||||+++|++++|+.||..... ..............+....
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~-- 225 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-------EEIFQNILNGKIEWPEDVE-- 225 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCcCCCcccc--
Confidence 22334678899999999888888999999999999999999999864321 1111122221222111110
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
....+.+++.+||+.+|++||++.++.+.|.
T Consensus 226 -~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 226 -VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 1233789999999999999999944444443
No 325
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.4e-33 Score=288.64 Aligned_cols=250 Identities=28% Similarity=0.448 Sum_probs=203.8
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|++|.||++... +++.|++|.+...... ....+.+.+|++++++++|+|++++++++.+++..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 4778899999999999999654 6789999999876543 2345789999999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 80 YAENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred cCCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999999987653 689999999999999999999998 99999999999999999999999999998776544
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.......++..|+|||...+..++.++||||+|+++|+|++|+.||...... ........ ...+......
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~-~~~~~~~~~~-- 223 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-------AALFRIVQ-DDHPPLPEGI-- 223 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHhc-cCCCCCCCCC--
Confidence 4334456889999999998888889999999999999999999998643210 11111111 1111111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
...+.+++.+|++.+|++||++.|++.+
T Consensus 224 -~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 224 -SPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred -CHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 2237899999999999999999999864
No 326
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5e-34 Score=292.32 Aligned_cols=251 Identities=25% Similarity=0.340 Sum_probs=203.3
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
+|++.+.||+|+||.||++.. .+++.+|+|++....... ....++.+|++++++++|+||+++++++.+....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 478889999999999999954 478899999987644332 234677889999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 530 YMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
|+++++|.+++.+.. ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999999999886532 123688999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhH
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIV 688 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 688 (740)
......++..|+|||...+..++.++|+||+|+++|||++|+.||..... ............+....
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~--- 223 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--------QDLRYKVQRGKYPPIPP--- 223 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCCCCCch---
Confidence 22334688999999999988899999999999999999999999864321 11111111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 689 QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 689 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.....+.+++.+|++.+|++||++.|++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 122338899999999999999999999876
No 327
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.6e-33 Score=293.85 Aligned_cols=260 Identities=23% Similarity=0.297 Sum_probs=195.5
Q ss_pred cccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc---CCCccceeeeeeeecCe----
Q 004642 452 FHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV---RHRNIVKLYGFCLHKKC---- 523 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~---- 523 (740)
|++.+.||+|+||.||+|..+ +++.||+|++......+ .....+.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 567889999999999999776 48999999997654322 2234566777777666 59999999999988776
Q ss_pred -EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 524 -MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 524 -~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
.+++|||+.+ +|.+++..... ..+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 9999999975 78888865432 2589999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCCch---
Q 004642 603 RLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPKIM--- 670 (740)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~~~--- 670 (740)
......... ....++..|+|||++.+..++.++|||||||++|||++|+.||........ .......
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 155 RIYSFEMAL-TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eeccCCccc-ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 876433222 233578899999999988899999999999999999999999875332100 0000000
Q ss_pred ---hhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 671 ---LIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 671 ---~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.......................+.+++.+||+.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000001111111111111222447799999999999999999999865
No 328
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.3e-33 Score=296.24 Aligned_cols=258 Identities=25% Similarity=0.349 Sum_probs=200.7
Q ss_pred cccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|...+.||+|+||.||+|.. .+|+.|++|++...........+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 56667899999999999965 46889999998765444444456788999999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+. |++.+.+.... ..+++.++..++.||+.|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 47777765433 2588999999999999999999998 999999999999999999999999999864322
Q ss_pred cccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 611 YRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
.....|+..|+|||++. ...++.++|||||||++|||++|..||...... ...........+......+
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 245 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNDSPTLQSNEW 245 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHHhcCCCCCCcccc
Confidence 22346889999999974 456788999999999999999999997543210 1111111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChhh
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQKA 729 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 729 (740)
. ..+.+++.+||+.+|++||++.+++++-.....+..+.
T Consensus 246 ~---~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~~~ 284 (313)
T cd06633 246 T---DSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRPARV 284 (313)
T ss_pred C---HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCchhHH
Confidence 1 23788999999999999999999999877665544443
No 329
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-35 Score=307.75 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=199.8
Q ss_pred ceeeecccceEEEEE-EeCCCcEEEEEEccCC-cccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC--eEEEEEEe
Q 004642 455 KYCIGTGGYGSVYKA-ELPEGKVVALKKLHHS-ETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK--CMFLIYEY 530 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~-~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~ 530 (740)
...||+|+|-+||+| +-.+|..||=-.++.. ....++..++|..|+.+++.++||||+++|.++.+.. ...+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 456999999999999 4446777773222111 1122344689999999999999999999999998754 47889999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCcEEEeecccceecccCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-NLEASVADFGTARLLHVDS 609 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~DfG~a~~~~~~~ 609 (740)
+..|+|..++.+.+ .++.+.+.+|++||++||.|||++ .|+|+|||||-.||+++. .|.|||+|+|+|+.+..
T Consensus 125 ~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~-- 198 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK-- 198 (632)
T ss_pred ccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc--
Confidence 99999999998776 588899999999999999999998 679999999999999984 58999999999988753
Q ss_pred CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 610 SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
.+....+|||.|||||... ..|++.+||||||+.++||+|+..||..- ....-++..+..+..|.......
T Consensus 199 s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC-------~n~AQIYKKV~SGiKP~sl~kV~- 269 (632)
T KOG0584|consen 199 SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC-------TNPAQIYKKVTSGIKPAALSKVK- 269 (632)
T ss_pred cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh-------CCHHHHHHHHHcCCCHHHhhccC-
Confidence 3333478999999999876 67999999999999999999999997532 22233444444444432221111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.+++.+||.+|+.. .++|||+.|++++-+...
T Consensus 270 -dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 270 -DPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred -CHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 23488999999999 999999999999876654
No 330
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=279.97 Aligned_cols=255 Identities=24% Similarity=0.304 Sum_probs=208.9
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
.++|...+.||+|.||.|-.++- .+|+.||+|++++...-....+.--..|-++++..+||.+..+--.+..++..++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 36788899999999999999954 47999999999988776666666677899999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||..||.|+-++.+.. .+++.....+-..|+.||.|||++ +||.||+|.+|.|+|.||++||+|||+++.--.
T Consensus 247 MeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999998887654 577888888899999999999998 999999999999999999999999999976433
Q ss_pred CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhh
Q 004642 608 DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKI 687 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 687 (740)
........+||+.|+|||++....|...+|.|.+||++|||++|+.||-.. ..+..+.-++-..+..+.. .
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~-------dh~kLFeLIl~ed~kFPr~--l 391 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK-------DHEKLFELILMEDLKFPRT--L 391 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc-------chhHHHHHHHhhhccCCcc--C
Confidence 344456679999999999999999999999999999999999999997532 1222222222222322211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRP-----TMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~ 721 (740)
.+ +...++...+..||.+|- .+.|+.++-..
T Consensus 392 s~---eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF 427 (516)
T KOG0690|consen 392 SP---EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFF 427 (516)
T ss_pred CH---HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhh
Confidence 12 256788889999999994 67787777644
No 331
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.5e-34 Score=304.96 Aligned_cols=263 Identities=23% Similarity=0.319 Sum_probs=195.8
Q ss_pred HhcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec-----
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK----- 521 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (740)
.+++|++.+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH--QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 357899999999999999999954 5789999999864322 22346678899999999999999999987654
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
...++++||+++ ++.+.+... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 357999999975 777766542 588999999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCc---ccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCcccccc--------cCCCCCc
Q 004642 602 ARLLHVDSSY---RTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS--------SSSGPKI 669 (740)
Q Consensus 602 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~--------~~~~~~~ 669 (740)
+......... .....|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||....... .......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 9765432221 123468899999998754 467889999999999999999999986432100 0000001
Q ss_pred hhhhhhc-----------ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 670 MLIDVLN-----------QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 670 ~~~~~~~-----------~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
....... .....+...........+.+++.+||+.+|++||++.|++++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~ 294 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 0110000 00000000001112234789999999999999999999999843
No 332
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=277.01 Aligned_cols=267 Identities=21% Similarity=0.328 Sum_probs=207.0
Q ss_pred HHHHHHHhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeee
Q 004642 442 YEDLINATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCL 519 (740)
Q Consensus 442 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 519 (740)
++|.-..++ +.||+|+|++|--+ .+.+|.+||||++.+... ..+.+..+|++++.+. .|+||+.++++|+
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g---HsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG---HSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCc---hHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 445444443 45999999999988 677899999999987643 3457888999999998 5999999999999
Q ss_pred ecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC---cEEE
Q 004642 520 HKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL---EASV 596 (740)
Q Consensus 520 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl 596 (740)
++..+|+|||.|.||.|..+|++.. .+++.++.++.++|+.||+|||.+ ||.|||+||+|||-.+.. -+||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 9999999999999999999998654 688999999999999999999999 999999999999997654 4799
Q ss_pred eecccceecccCCC-------cccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccC
Q 004642 597 ADFGTARLLHVDSS-------YRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSS 664 (740)
Q Consensus 597 ~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~ 664 (740)
+||.+..-+..... .....+|+..|||||+.. ...|+.+.|.||+|||+|-|++|..||...-...=.
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 99998765432211 112347899999999764 345888999999999999999999999765432111
Q ss_pred CCC-------CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 665 SGP-------KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 665 ~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..+ ...+.+-+...--.....+|..-..+..+++...+..||.+|-++.+++++....
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~ 365 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ 365 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence 111 1222232322222223344555555678899999999999999999999876544
No 333
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.6e-34 Score=304.29 Aligned_cols=264 Identities=21% Similarity=0.254 Sum_probs=199.2
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec-----C
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK-----K 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 522 (740)
.++|.+.+.||+|+||.||++.. .+|+.||+|++....... .....+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 46799999999999999999954 468999999987643222 2245677899999999999999999988654 3
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..++|+||+. ++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 5899999996 58888876543 588999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCcccccc---------cC-------C
Q 004642 603 RLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS---------SS-------S 665 (740)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~---------~~-------~ 665 (740)
..............++..|+|||.+.. ..++.++|||||||++|+|++|+.||....... .. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 876543333344468899999998764 468889999999999999999999986432100 00 0
Q ss_pred CCCchhhhhhcccC---CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 666 GPKIMLIDVLNQRL---SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 666 ~~~~~~~~~~~~~l---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
.......+.+.... ..............+.+++.+||+.+|++||+++|++++-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 00001111111100 01001111122334789999999999999999999999943
No 334
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.1e-33 Score=294.38 Aligned_cols=257 Identities=22% Similarity=0.273 Sum_probs=190.8
Q ss_pred cccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeec--CeEEEE
Q 004642 452 FHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHK--KCMFLI 527 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 527 (740)
|++.+.||+|+||.||+|.. .+++.||+|+++........ ....+|+.++.++. |+|++++++++.++ +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~--~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ--VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchh--hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 56788999999999999954 46899999998764332221 23457888888885 99999999999987 889999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++ ++.+.+.... ..+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++....
T Consensus 79 ~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 79 FELMDM-NLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EecCCc-cHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 999975 7777776533 2589999999999999999999998 9999999999999999 9999999999987643
Q ss_pred CCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCchhhhhhcccC
Q 004642 608 DSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKIMLIDVLNQRL 679 (740)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~l 679 (740)
.... ....++..|+|||++.. ..++.++||||+||++|||++|+.||........ ................
T Consensus 152 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 152 KPPY-TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred CCCc-CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 3222 23457889999997654 4578899999999999999999999865322100 0000000000000000
Q ss_pred ------CCcc----hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 680 ------SPPV----NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 680 ------~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
+... ..........+.+++.+||+.+|++||++++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000 00001123448899999999999999999999876
No 335
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.8e-34 Score=303.89 Aligned_cols=268 Identities=24% Similarity=0.307 Sum_probs=201.3
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee----cCe
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH----KKC 523 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~ 523 (740)
.++|++.+.||+|+||.||+|.. .+|+.||+|++....... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-TLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-cchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 47899999999999999999954 469999999987643322 234677789999999999999999998763 356
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.++||||+. ++|.+++.... .+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 899999996 58888886543 489999999999999999999998 99999999999999999999999999997
Q ss_pred ecccCCC----cccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCcccccc--------cCCC----
Q 004642 604 LLHVDSS----YRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS--------SSSG---- 666 (740)
Q Consensus 604 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~--------~~~~---- 666 (740)
....... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 6543221 1123468899999998765 457889999999999999999999986432100 0000
Q ss_pred ----CCchhhhhhcc---cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 667 ----PKIMLIDVLNQ---RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 667 ----~~~~~~~~~~~---~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
......+.... ................+.+++.+||+.+|++||++++++++......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 00001111110 00111000011123348899999999999999999999998866433
No 336
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-34 Score=317.03 Aligned_cols=273 Identities=19% Similarity=0.225 Sum_probs=190.5
Q ss_pred HhcccccceeeecccceEEEEEEeCC--CcEEEEEE--------------ccCCcccchHHHHHHHHHHHHHhccCCCcc
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELPE--GKVVALKK--------------LHHSETEDSAFVKSFQNEAHVLSTVRHRNI 511 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~--------------~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 511 (740)
..++|++.+.||+|+||+||++..+. +..++.|. +.............+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999985432 22222221 111111112234578899999999999999
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchhhhcCCCc--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDE--AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD 589 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 589 (740)
+++++++...+..++|++++.+ ++.+++..... .......++..++.||+.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999864 66666643221 11234567788999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCC-cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCC-CCcccccc-----
Q 004642 590 SNLEASVADFGTARLLHVDSS-YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHP-GGLLSSLS----- 662 (740)
Q Consensus 590 ~~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p-~~~~~~~~----- 662 (740)
.++.+||+|||+++.+..... ......||..|+|||++.+..++.++|||||||++|||++|..+ +.......
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 999999999999987653322 22235799999999999999999999999999999999998754 33211000
Q ss_pred ---------c--CCCCCchhhhhhcccCCCcchhhhH------HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 663 ---------S--SSGPKIMLIDVLNQRLSPPVNQKIV------QDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 663 ---------~--~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
. .........+.+............. .....+.+++.+|++.||++||++.|++++-.....
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 0 0000000111111000000000000 001125678899999999999999999998776544
No 337
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6.5e-34 Score=295.65 Aligned_cols=251 Identities=26% Similarity=0.380 Sum_probs=203.2
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 527 (740)
++|.+.+.||+|+||.||++... +|+.||+|++...........+.+.+|.+++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999654 78999999987644433344567889999999998 99999999999999999999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999997654 689999999999999999999998 999999999999999999999999999886543
Q ss_pred CCC--------------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCC
Q 004642 608 DSS--------------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGP 667 (740)
Q Consensus 608 ~~~--------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~ 667 (740)
... ......++..|+|||...+..++.++||||+|++++++++|+.||.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------- 227 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE------- 227 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-------
Confidence 221 11223578899999999888889999999999999999999999875321
Q ss_pred CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCH----HHHHHH
Q 004642 668 KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTM----QRISQE 718 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~ev~~~ 718 (740)
.............. +... ...+.+++.+||+.+|++||++ +|++++
T Consensus 228 ~~~~~~~~~~~~~~--~~~~---~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 228 YLTFQKILKLEYSF--PPNF---PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHHHhcCCCC--CCcc---CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 11111222111111 1111 1237899999999999999999 787765
No 338
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.1e-33 Score=295.43 Aligned_cols=254 Identities=25% Similarity=0.377 Sum_probs=200.2
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERG 534 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 534 (740)
..||+|+||.||++.. .+|+.||+|++..... ...+.+.+|+.+++.++|+|++++++++..++..+++|||++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch---hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 5699999999999965 4789999998854332 23467889999999999999999999999999999999999999
Q ss_pred CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccc
Q 004642 535 SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTL 614 (740)
Q Consensus 535 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 614 (740)
+|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++............
T Consensus 103 ~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~ 175 (292)
T cd06657 103 ALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 175 (292)
T ss_pred cHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence 999887543 478899999999999999999998 9999999999999999999999999998766443333344
Q ss_pred cccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHH
Q 004642 615 RAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILV 694 (740)
Q Consensus 615 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 694 (740)
..|+..|+|||+..+..++.++|+||+|+++|+|++|+.||...... .....+....+.... ........+
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~l 246 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDNLPPKLK-NLHKVSPSL 246 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhhCCcccC-CcccCCHHH
Confidence 56889999999998888899999999999999999999997642211 011111111111100 001112237
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChh
Q 004642 695 STIAFACLSSQPKSRPTMQRISQELLAGKTPMQK 728 (740)
Q Consensus 695 ~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 728 (740)
.+++.+||+.+|.+||++.+++++-...+...+.
T Consensus 247 ~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 247 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred HHHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence 7899999999999999999999986554443333
No 339
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.2e-33 Score=290.50 Aligned_cols=246 Identities=25% Similarity=0.313 Sum_probs=187.7
Q ss_pred eeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHH-hccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVL-STVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.||+|+||.||+|.. .+|+.||+|.+.............+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999955 46899999998754332222233444555444 445899999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||+++.... ..
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999987543 578899999999999999999998 999999999999999999999999999876432 22
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIIL 693 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 693 (740)
...|+..|+|||...+..++.++||||+|+++|||++|..||..... ..............+... .......
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~ 223 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-------DAVFDNILSRRINWPEEV-KEFCSPE 223 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcccCCCCcc-cccCCHH
Confidence 34688899999999888889999999999999999999999864221 111112111111111000 0011223
Q ss_pred HHHHHHHcccCCCCCCCCH---HHHHHHH
Q 004642 694 VSTIAFACLSSQPKSRPTM---QRISQEL 719 (740)
Q Consensus 694 l~~li~~cl~~dP~~RPs~---~ev~~~L 719 (740)
+.+++.+||+.+|++||++ +|++++-
T Consensus 224 ~~~~i~~~l~~~p~~R~~~~~~~~~l~~~ 252 (260)
T cd05611 224 AVDLINRLLCMDPAKRLGANGYQEIKSHP 252 (260)
T ss_pred HHHHHHHHccCCHHHccCCCcHHHHHcCh
Confidence 7899999999999999966 4555543
No 340
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-33 Score=294.24 Aligned_cols=258 Identities=18% Similarity=0.225 Sum_probs=181.5
Q ss_pred hcccccceeeecccceEEEEEEeCC----CcEEEEEEccCCcccc--hHH------HHHHHHHHHHHhccCCCccceeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE----GKVVALKKLHHSETED--SAF------VKSFQNEAHVLSTVRHRNIVKLYG 516 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~--~~~------~~~~~~E~~~l~~l~h~niv~l~~ 516 (740)
.++|.+.+.||+|+||.||+|...+ +..+|+|+........ +.. ......+...+..++|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999997654 3456666543322110 000 011223344556678999999999
Q ss_pred eeeecC----eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 004642 517 FCLHKK----CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL 592 (740)
Q Consensus 517 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~ 592 (740)
++.... ..++++|++.. ++.+.+.... ..++..+..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 776543 34677777643 4555544322 356788899999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCC-------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCC
Q 004642 593 EASVADFGTARLLHVDSS-------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSS 665 (740)
Q Consensus 593 ~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~ 665 (740)
.++|+|||+|+.+..... ......||+.|+|||+..+..++.++|||||||++|||++|+.||..........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 999999999987643221 1223469999999999999999999999999999999999999987542110000
Q ss_pred C-C-CchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 666 G-P-KIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 666 ~-~-~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
. . ..............+ .....+.+++..|++.+|++||+++++.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHEGKIKIK------NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhhhhhccC------CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0 0 000111111111111 1123388999999999999999999999875
No 341
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.2e-33 Score=289.40 Aligned_cols=251 Identities=23% Similarity=0.300 Sum_probs=192.6
Q ss_pred HHHHHHhcccccceee--ecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeee
Q 004642 443 EDLINATEDFHIKYCI--GTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFC 518 (740)
Q Consensus 443 ~~l~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 518 (740)
.+.....+.|.+.+.+ |+|+||.||++.. .+++.+|+|.+....... . |......+ +|||++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~--e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------I--EPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------h--hHHHHHHhhcCCCEEEEEEEE
Confidence 4445556778887776 9999999999954 468889999986543221 1 22222222 799999999999
Q ss_pred eecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-cEEEe
Q 004642 519 LHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-EASVA 597 (740)
Q Consensus 519 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~ 597 (740)
..++..++||||+++++|.+++.... .+++.++..++.||++|++|||+. +++||||||+||+++.++ .++|+
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~ 152 (267)
T PHA03390 79 TTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLC 152 (267)
T ss_pred ecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEe
Confidence 99999999999999999999997653 689999999999999999999998 999999999999999998 99999
Q ss_pred ecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcc
Q 004642 598 DFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQ 677 (740)
Q Consensus 598 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
|||.++..... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||....... ............
T Consensus 153 dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~ 225 (267)
T PHA03390 153 DYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE---LDLESLLKRQQK 225 (267)
T ss_pred cCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch---hhHHHHHHhhcc
Confidence 99999765422 22358899999999998889999999999999999999999987432110 000111111111
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHH
Q 004642 678 RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT-MQRISQEL 719 (740)
Q Consensus 678 ~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ev~~~L 719 (740)
.... .. .....+.+++.+||+.+|++||+ ++|++++-
T Consensus 226 ~~~~--~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~ 263 (267)
T PHA03390 226 KLPF--IK---NVSKNANDFVQSMLKYNINYRLTNYNEIIKHP 263 (267)
T ss_pred cCCc--cc---ccCHHHHHHHHHHhccChhhCCchHHHHhcCC
Confidence 1111 11 12233889999999999999996 69988763
No 342
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2e-33 Score=296.65 Aligned_cols=263 Identities=22% Similarity=0.351 Sum_probs=192.5
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-----
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK----- 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 522 (740)
.++|++.+.||+|+||.||+|... +++.||+|++....... .....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 457999999999999999999654 68999999886543322 12245668999999999999999999987654
Q ss_pred ---eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 523 ---CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 523 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
..++||||+.+ ++.+.+.... ..+++.++..++.||+.||+|||++ +++|+||||+||+++.++.+||+||
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 45999999975 7777775433 2578999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCC----cccccccCCCccccccccccc-cCCcchhHhHHHHHHHHHhCCCCCCcccccc------------
Q 004642 600 GTARLLHVDSS----YRTLRAGTYGYIAPELAYTIV-VTGKCDVYSFGVVALEVLMGTHPGGLLSSLS------------ 662 (740)
Q Consensus 600 G~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~------------ 662 (740)
|++........ ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||.......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99976643221 112345788999999887643 6789999999999999999999986432100
Q ss_pred -cCCCCCchhhhhhcc-cCCCcchhhhH------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 663 -SSSGPKIMLIDVLNQ-RLSPPVNQKIV------QDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 663 -~~~~~~~~~~~~~~~-~l~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
....+.....+..+. ..+........ .....+.+++.+||+.||++||+++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000000000000000 00000000000 011236789999999999999999999876
No 343
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.3e-33 Score=296.05 Aligned_cols=257 Identities=24% Similarity=0.339 Sum_probs=196.1
Q ss_pred hcccccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (740)
.++|++.+.||+|+||.||+|...+ ++.||||.+....... ...++.+|++++.+. .||||+++++++.+....++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE--ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH--HHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 3678889999999999999997764 8999999997543322 235566677767666 49999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
+|||+++ ++.+++..... .+++..+..++.||+.||+|||+ . +++||||+|+||++++++.+||+|||++..+
T Consensus 92 v~e~~~~-~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 92 CMELMST-CLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EeeccCc-CHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 9999864 66666654332 68899999999999999999996 5 8999999999999999999999999999765
Q ss_pred ccCCCcccccccCCCccccccccccc----cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 606 HVDSSYRTLRAGTYGYIAPELAYTIV----VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
..... .....++..|+|||++.+.. ++.++||||||+++|+|++|+.||..... ........+......
T Consensus 166 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~ 238 (296)
T cd06618 166 VDSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT------EFEVLTKILQEEPPS 238 (296)
T ss_pred cCCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh------HHHHHHHHhcCCCCC
Confidence 43222 22335788999999987553 78899999999999999999999864211 011122222221111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.... ......+.+++.+||+.||++||++.+++++....
T Consensus 239 ~~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~ 277 (296)
T cd06618 239 LPPN--EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277 (296)
T ss_pred CCCC--CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 0000 01123478999999999999999999999887543
No 344
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=332.03 Aligned_cols=259 Identities=29% Similarity=0.442 Sum_probs=205.8
Q ss_pred HHhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEE
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (740)
..+-+++-...||.|.||.||.+ ...+|...|+|-++..... ....+...+|+.++..++|||+|+++|+-.+.+..+
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 34556777788999999999999 5667999999988765544 334577889999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
|-||||++|+|.+.+.... ..++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.|..+
T Consensus 1311 IFMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEe
Confidence 9999999999999998754 345566667889999999999999 9999999999999999999999999999887
Q ss_pred ccCCCc----ccccccCCCccccccccccc---cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc
Q 004642 606 HVDSSY----RTLRAGTYGYIAPELAYTIV---VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 606 ~~~~~~----~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
...... .....||+.|||||++.+.. ...+.||||+|||+.||+||+.||..... .......+-..+
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn------e~aIMy~V~~gh 1458 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN------EWAIMYHVAAGH 1458 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc------hhHHHhHHhccC
Confidence 654311 23347999999999998643 45689999999999999999999764321 111122222222
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
. |+.+..... +-.+++..|+..||++|.++.|++++=...
T Consensus 1459 ~-Pq~P~~ls~---~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1459 K-PQIPERLSS---EGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred C-CCCchhhhH---hHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 2 222222333 367899999999999999999999876544
No 345
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2e-33 Score=293.01 Aligned_cols=260 Identities=27% Similarity=0.373 Sum_probs=196.6
Q ss_pred cccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEE
Q 004642 452 FHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK--KCMFLIY 528 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 528 (740)
|++.+.||+|+||.||+|... +|+.+|+|++.... ......+.+.+|++++++++|+|++++++++... +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 667889999999999999665 58999999998764 2223346788999999999999999999999988 8999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
||+++ +|.+++.... ..+++.++..++.||+.||+|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 80 EYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 99985 8888876543 2689999999999999999999998 9999999999999999999999999999876543
Q ss_pred CC-cccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCC--ch-----
Q 004642 609 SS-YRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPK--IM----- 670 (740)
Q Consensus 609 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~--~~----- 670 (740)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ..... ..
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 21 1233457889999998765 4578899999999999999999999864332100 00000 00
Q ss_pred hhhhhcccCCC-cchhhhH-H-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 671 LIDVLNQRLSP-PVNQKIV-Q-DIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 671 ~~~~~~~~l~~-~~~~~~~-~-~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
........... ....... . ....+.+++.+||+.+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000000000 0000000 0 13347899999999999999999999875
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.2e-33 Score=290.12 Aligned_cols=251 Identities=21% Similarity=0.237 Sum_probs=190.2
Q ss_pred eeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHH---HHhccCCCccceeeeeeeecCeEEEEEEecc
Q 004642 457 CIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAH---VLSTVRHRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
.||+|+||.||++.. .+|+.||+|.+.............+..|.. .++...||+|+.+++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 389999999999965 468999999987643322221122333433 4444579999999999999999999999999
Q ss_pred CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcc
Q 004642 533 RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYR 612 (740)
Q Consensus 533 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 612 (740)
+++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++...... ..
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~ 152 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CC
Confidence 999998886543 589999999999999999999998 9999999999999999999999999998765322 22
Q ss_pred cccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHH
Q 004642 613 TLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDI 691 (740)
Q Consensus 613 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 691 (740)
....|+..|+|||++.+. .++.++||||+||++|||++|+.||...... ......... ........... .
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~---s 223 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEIDRMT-LTMAVELPDSF---S 223 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc-----chHHHHHHh-hccCCCCCCcC---C
Confidence 234789999999998754 5888999999999999999999998653210 001111111 11111111111 2
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHHHHHcCCC
Q 004642 692 ILVSTIAFACLSSQPKSRP-----TMQRISQELLAGKT 724 (740)
Q Consensus 692 ~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~~~~ 724 (740)
..+.+++.+|+..+|++|| ++.+++++-.....
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 2378999999999999999 99999987765543
No 347
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.2e-33 Score=298.57 Aligned_cols=259 Identities=22% Similarity=0.302 Sum_probs=193.2
Q ss_pred eeeecc--cceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEecc
Q 004642 456 YCIGTG--GYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 456 ~~lg~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
..||+| +||+||++.. .+|+.||+|++......+ ...+.+.+|+.+++.++||||+++++++..++..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 8999999965 479999999987654333 335788999999999999999999999999999999999999
Q ss_pred CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc-
Q 004642 533 RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY- 611 (740)
Q Consensus 533 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~- 611 (740)
++++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+.........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999998876432 2478999999999999999999998 9999999999999999999999999865433211111
Q ss_pred ------ccccccCCCcccccccccc--ccCCcchhHhHHHHHHHHHhCCCCCCcccccc-------cCCC-C-----C--
Q 004642 612 ------RTLRAGTYGYIAPELAYTI--VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS-------SSSG-P-----K-- 668 (740)
Q Consensus 612 ------~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~-------~~~~-~-----~-- 668 (740)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||....... .... . .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 0112345679999998763 47889999999999999999999986432100 0000 0 0
Q ss_pred ---c-----------hhh---------hhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 669 ---I-----------MLI---------DVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 669 ---~-----------~~~---------~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
. ... .........+. .......+.+++.+||+.||++|||+.|++++-...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~ 312 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPS---SKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK 312 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchh---hhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence 0 000 00000001100 112234588999999999999999999999887643
No 348
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.6e-33 Score=300.28 Aligned_cols=263 Identities=25% Similarity=0.311 Sum_probs=201.6
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-----eE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK-----CM 524 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 524 (740)
+|++.+.||.|+||.||+|... +|+.||+|++..... +....+.+.+|++++++++|+||+++++++...+ ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4788999999999999999764 589999999976432 1233467889999999999999999999998775 78
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
+++|||+++ +|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+..
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEEecchhh-hHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 999999985 7888886543 689999999999999999999998 999999999999999999999999999987
Q ss_pred cccCC---CcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccc---------cCCC-----
Q 004642 605 LHVDS---SYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS---------SSSG----- 666 (740)
Q Consensus 605 ~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~---------~~~~----- 666 (740)
..... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||....... ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 65443 123334678899999999887 78899999999999999999999986433210 0000
Q ss_pred --CCchhhhhhcc---cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 667 --PKIMLIDVLNQ---RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 667 --~~~~~~~~~~~---~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
......+.+.. ................+.+++.+||+.+|++||++++++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 292 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccH
Confidence 00000111110 00000000001112337899999999999999999999998543
No 349
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.9e-33 Score=291.24 Aligned_cols=260 Identities=24% Similarity=0.317 Sum_probs=199.4
Q ss_pred cccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|++.+.||+|++|.||++... +|+.+++|++....... .....+.+|++++++++|+||+++++++..++..++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 567789999999999999654 68899999987654332 3346788899999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+++ ++.+++.... ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 80 MDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred cCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 976 8877776543 3689999999999999999999998 999999999999999999999999999987754432
Q ss_pred cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhhhhhc-----
Q 004642 611 YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLIDVLN----- 676 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~~~~~----- 676 (740)
......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||........ .............
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 23334678899999998776 788899999999999999999999864332100 0000000000000
Q ss_pred ----cc-CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 677 ----QR-LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 677 ----~~-l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.. ...............+.+++.+||+.||.+||++++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 0000011111223448899999999999999999999875
No 350
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.4e-33 Score=301.46 Aligned_cols=263 Identities=28% Similarity=0.356 Sum_probs=196.3
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeec--Ce
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHK--KC 523 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~ 523 (740)
..++|++.+.||+|+||.||+|... +|+.+|+|++....... .....+.+|+.+++++ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-TDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-hhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 4578999999999999999999654 68899999886532222 2235677899999999 999999999998653 46
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.++||||+++ +|..++... .+++..+..++.||+.||+|||+. +|+|+||||+||+++.++.+||+|||.+.
T Consensus 84 ~~lv~e~~~~-~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 84 IYLVFEYMET-DLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEEeccccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 8999999974 888887653 578899999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCC-----cccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCc
Q 004642 604 LLHVDSS-----YRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKI 669 (740)
Q Consensus 604 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~ 669 (740)
....... ......|+..|+|||++.+ ..++.++||||||+++|+|++|+.||........ ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6643321 1223468899999998765 4578899999999999999999999864321100 000000
Q ss_pred hh--------hhhhc---ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 670 ML--------IDVLN---QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 670 ~~--------~~~~~---~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.. ...+. .................+.+++.+||+.+|++||++.+++++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~ 296 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence 00 00010 0000000000011123478999999999999999999999884
No 351
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.2e-33 Score=292.33 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=194.8
Q ss_pred cccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEE
Q 004642 452 FHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 529 (740)
|++.+.||+|++|+||+|... +++.|++|++........ .....+|+..+.+++ |+|++++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh--HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 567889999999999999765 578899999876443221 133456889999998 9999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+ +|+|.+.+.... ...+++.++..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 79 YM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred cC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 99 789988887644 23579999999999999999999998 99999999999999999999999999998764322
Q ss_pred CcccccccCCCcccccccc-ccccCCcchhHhHHHHHHHHHhCCCCCCccccccc---------CCCCCch-----hhhh
Q 004642 610 SYRTLRAGTYGYIAPELAY-TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---------SSGPKIM-----LIDV 674 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---------~~~~~~~-----~~~~ 674 (740)
. .....++..|+|||++. ...++.++|+||||+++|||++|+.||........ ......+ ....
T Consensus 154 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 P-YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred C-cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 2 23346888999999875 44578899999999999999999999854321100 0000000 0000
Q ss_pred hcccC----CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 675 LNQRL----SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 675 ~~~~l----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
..... ..............+.+++.+||+.+|++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000 000000001112348899999999999999999999875
No 352
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.7e-33 Score=297.43 Aligned_cols=264 Identities=22% Similarity=0.301 Sum_probs=197.6
Q ss_pred HHHhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee-cCe
Q 004642 446 INATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH-KKC 523 (740)
Q Consensus 446 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 523 (740)
..++++|++.+.||.|+||.||++. ..+|+.||+|++....... ...+.+.+|++++++++||||+++++++.. ...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP-VLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3467899999999999999999995 4478999999886543222 224677889999999999999999998876 557
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
.++++||+ +++|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.+.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 89999998 45888777643 467788889999999999999998 99999999999999999999999999997
Q ss_pred ecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchhh--
Q 004642 604 LLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIMLI-- 672 (740)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~-- 672 (740)
..... .....++..|+|||++.+ ..++.++||||||+++|+|++|+.||........ .........
T Consensus 157 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 157 IQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred ccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 54321 122357889999998765 5688999999999999999999999864321000 000000000
Q ss_pred ------hhhc---ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 673 ------DVLN---QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 673 ------~~~~---~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
+... .....+...........+.+++.+|++.+|++||++++++.+-..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~ 291 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcc
Confidence 0000 000001100011112348899999999999999999999988543
No 353
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-34 Score=303.00 Aligned_cols=201 Identities=30% Similarity=0.474 Sum_probs=176.1
Q ss_pred cccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec------CeE
Q 004642 452 FHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK------KCM 524 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 524 (740)
|...+.||+|+||.||+|+ ..+|+.||||.++....... .+...+|++++++++|+|||++++.-.+. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~--~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRP--RERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccch--HHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3445679999999999997 45799999999988664443 47888999999999999999999987654 357
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc--CCCc--EEEeecc
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD--SNLE--ASVADFG 600 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--~~~~--~kl~DfG 600 (740)
.+|||||.+|+|+..+.+......+++.+.+.+..+++.||.|||++ +|+||||||.||++- ++|+ -||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 99999999999999999988888899999999999999999999999 999999999999884 4444 5999999
Q ss_pred cceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCcc
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLL 658 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~ 658 (740)
.|+....++ .....+||..|.+||.... ..|+..+|.|||||++|+.+||..||...
T Consensus 170 ~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 170 AARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 999987555 5566799999999999984 78888999999999999999999998643
No 354
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.3e-33 Score=299.52 Aligned_cols=270 Identities=22% Similarity=0.243 Sum_probs=198.3
Q ss_pred hccccc-ceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchH-----------HHHHHHHHHHHHhccCCCccceee
Q 004642 449 TEDFHI-KYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSA-----------FVKSFQNEAHVLSTVRHRNIVKLY 515 (740)
Q Consensus 449 ~~~~~~-~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~ 515 (740)
.++|.. .+.||+|+||.||+|.. .+++.||+|++......... ....+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 355654 46799999999999964 46899999998654332210 112577899999999999999999
Q ss_pred eeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEE
Q 004642 516 GFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEAS 595 (740)
Q Consensus 516 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 595 (740)
+++..++..++||||++ |+|.+++.... .+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 99999999999999997 58888886433 578899999999999999999998 999999999999999999999
Q ss_pred EeecccceecccC--------------CCcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccc
Q 004642 596 VADFGTARLLHVD--------------SSYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSS 660 (740)
Q Consensus 596 l~DfG~a~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~ 660 (740)
|+|||.+...... ........++..|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999765411 1111223467899999998764 468899999999999999999999864332
Q ss_pred ccc--------CCCCCchhhh--------hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCC
Q 004642 661 LSS--------SSGPKIMLID--------VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKT 724 (740)
Q Consensus 661 ~~~--------~~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~ 724 (740)
... .......... ......+.............+.+++.+|++.+|++||+++|++.+......
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 100 0000000000 000000000000011112347899999999999999999999998876544
Q ss_pred C
Q 004642 725 P 725 (740)
Q Consensus 725 ~ 725 (740)
+
T Consensus 320 ~ 320 (335)
T PTZ00024 320 P 320 (335)
T ss_pred C
Confidence 3
No 355
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=318.36 Aligned_cols=259 Identities=27% Similarity=0.432 Sum_probs=210.1
Q ss_pred hcccccceeeecccceEEEEEEeC--------CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP--------EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCL 519 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 519 (740)
.++..+.+.+|+|.||.|++|... ....||||.++..... ...+.+..|+++|+.+ +|+||+.++|+|.
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 344456668999999999999532 1457999999877665 3358899999999998 6999999999999
Q ss_pred ecCeEEEEEEeccCCCchhhhcCCC-------c----c--ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 004642 520 HKKCMFLIYEYMERGSLFCVLHDDD-------E----A--IELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNI 586 (740)
Q Consensus 520 ~~~~~~lv~e~~~~g~L~~~l~~~~-------~----~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NI 586 (740)
.++..++|+||++.|+|.+++.... . . ..++..+.+.++.|||.|++||++. +++||||..+||
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNV 449 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNV 449 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhE
Confidence 9999999999999999999997654 0 0 1388999999999999999999999 999999999999
Q ss_pred EEcCCCcEEEeecccceecccCCCcc-cccc--cCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccc
Q 004642 587 LLDSNLEASVADFGTARLLHVDSSYR-TLRA--GTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLS 662 (740)
Q Consensus 587 ll~~~~~~kl~DfG~a~~~~~~~~~~-~~~~--gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~ 662 (740)
|++++..+||+|||+|+.......+. .... -+..|||||.+....++.|+|||||||++||++| |..|+....
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~--- 526 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP--- 526 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---
Confidence 99999999999999999765444433 1112 2567999999999999999999999999999999 788865311
Q ss_pred cCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 663 SSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....+.+.+.+..+.+.+....+ ++.++++.||+.+|++||++.|+.+.+...
T Consensus 527 ----~~~~l~~~l~~G~r~~~P~~c~~---eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 527 ----PTEELLEFLKEGNRMEQPEHCSD---EIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ----cHHHHHHHHhcCCCCCCCCCCCH---HHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 12223445555554444443333 388999999999999999999999999873
No 356
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.1e-33 Score=294.07 Aligned_cols=265 Identities=27% Similarity=0.377 Sum_probs=195.7
Q ss_pred HHhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC---
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK--- 522 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 522 (740)
...++|++.+.||+|+||.||+|..+ +|+.||+|+++.....+ .....+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-GFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-CchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 34678999999999999999999664 58999999987543222 12356778999999999999999999987654
Q ss_pred -------eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEE
Q 004642 523 -------CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEAS 595 (740)
Q Consensus 523 -------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 595 (740)
..++|+||+++ ++.+.+.... ..+++..+..++.||+.||+|||+. +|+|+||||+||++++++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 6666665432 2589999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCC-cccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CC
Q 004642 596 VADFGTARLLHVDSS-YRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SS 665 (740)
Q Consensus 596 l~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~ 665 (740)
|+|||.+........ ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 999999987654332 1222356788999998764 3578899999999999999999999864321100 00
Q ss_pred CCCch---hhhh-----hcccC--CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 666 GPKIM---LIDV-----LNQRL--SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 666 ~~~~~---~~~~-----~~~~l--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
..... ..+. .++.. ..............+.+++.+||+.+|++||++.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 0000 00000 000000000112347899999999999999999999875
No 357
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.8e-33 Score=284.76 Aligned_cols=243 Identities=28% Similarity=0.368 Sum_probs=198.1
Q ss_pred eecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||+|+||.||++... +++.+|+|.+...........+.+..|++++++++|||++++++.+..++..+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999654 5899999998876555444567889999999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccc
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRA 616 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 616 (740)
.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99987653 578999999999999999999998 999999999999999999999999999987654333334456
Q ss_pred cCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHH
Q 004642 617 GTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVST 696 (740)
Q Consensus 617 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 696 (740)
++..|+|||...+...+.++|+||||+++|++++|+.||..... ..............+.. . ...+.+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~--~---~~~l~~ 222 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-------KEIYEKILKDPLRFPEF--L---SPEARD 222 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHhcCCCCCCCC--C---CHHHHH
Confidence 88999999999888888999999999999999999999864321 11122222222211111 1 123789
Q ss_pred HHHHcccCCCCCCCCH---HHHHHH
Q 004642 697 IAFACLSSQPKSRPTM---QRISQE 718 (740)
Q Consensus 697 li~~cl~~dP~~RPs~---~ev~~~ 718 (740)
++.+||..||++||++ +++.++
T Consensus 223 ~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 223 LISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HHHHHhcCCHhhCCCcccHHHHHhC
Confidence 9999999999999999 565543
No 358
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.4e-33 Score=288.15 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=195.1
Q ss_pred ccccceeeecccceEEEEEEeCC-CcEEEEEEccCCccc--chHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETE--DSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
+|.+.+.||+|+||.||++.... +..+++|.++..... ......++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47888999999999999996543 444555555432221 111234567789999999999999999999999999999
Q ss_pred EEeccCCCchhhhcCCC-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 528 YEYMERGSLFCVLHDDD-EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|||+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999998886432 234689999999999999999999998 9999999999999975 569999999998765
Q ss_pred cCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
..........|+..|+|||...+..++.++|+||||+++|+|++|..||..... ......... ...+....
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~- 227 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-------LSVVLRIVE-GPTPSLPE- 227 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHc-CCCCCCcc-
Confidence 443333445688899999999888888999999999999999999999863221 111111111 11111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.....+.+++.+||+.+|++||++.|++++
T Consensus 228 --~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 228 --TYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred --hhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 112347889999999999999999999876
No 359
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.5e-34 Score=276.56 Aligned_cols=274 Identities=23% Similarity=0.293 Sum_probs=202.2
Q ss_pred hcccccceeeecccceEEEEEEeCC-----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee-cC
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE-----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH-KK 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 522 (740)
...|+....||+|.||.||+|.-++ .+.+|+|+++.+..... ......+|+.+++.++|||++.+..++.+ +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 4578889999999999999994332 23799999987654332 23567899999999999999999999887 78
Q ss_pred eEEEEEEeccCCCchhhhcCC--CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC----CcEEE
Q 004642 523 CMFLIYEYMERGSLFCVLHDD--DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN----LEASV 596 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~----~~~kl 596 (740)
..++++||.+. +|+..++-. .....++...+.+|+.||+.|+.|||++ =|+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 89999999988 888887543 2334788999999999999999999998 79999999999999877 89999
Q ss_pred eecccceecccCCC---cccccccCCCccccccccccc-cCCcchhHhHHHHHHHHHhCCCCCCcccc-cccC-------
Q 004642 597 ADFGTARLLHVDSS---YRTLRAGTYGYIAPELAYTIV-VTGKCDVYSFGVVALEVLMGTHPGGLLSS-LSSS------- 664 (740)
Q Consensus 597 ~DfG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~-~~~~------- 664 (740)
+|||+++.+...-. ....++-|..|+|||.+.+.. ||.+.|||+.|||+.||+|-.+-|..... ....
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 99999998764322 224456799999999998764 78889999999999999998766543211 0000
Q ss_pred ----------CC----------CC--chhhhhhcccCCCcchhhhHH----HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 665 ----------SG----------PK--IMLIDVLNQRLSPPVNQKIVQ----DIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 665 ----------~~----------~~--~~~~~~~~~~l~~~~~~~~~~----~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
+. ++ ..+.++-...........+.. ......+++.+++..||.+|.|+++.+++
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 00 00 000000000000000000000 01115689999999999999999999999
Q ss_pred HHcCCCCCh
Q 004642 719 LLAGKTPMQ 727 (740)
Q Consensus 719 L~~~~~~~~ 727 (740)
.-..+.+.+
T Consensus 338 ~yF~~d~lp 346 (438)
T KOG0666|consen 338 PYFTEDPLP 346 (438)
T ss_pred cccccCCCC
Confidence 988776544
No 360
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.1e-33 Score=290.59 Aligned_cols=260 Identities=26% Similarity=0.345 Sum_probs=199.3
Q ss_pred ccccceeeecccceEEEEEEe----CCCcEEEEEEccCCcccc-hHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL----PEGKVVALKKLHHSETED-SAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 524 (740)
.|++.+.||+|+||.||++.. .+|+.||+|++....... ....+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999965 368999999987543221 22346678899999999 589999999999999999
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999987543 578889999999999999999998 999999999999999999999999999987
Q ss_pred cccCCCc-ccccccCCCcccccccccc--ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDSSY-RTLRAGTYGYIAPELAYTI--VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~~~-~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
....... .....|+..|+|||...+. .++.++||||||+++|+|++|+.||..... ........+.+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~----~~~~~~~~~~~~~~~~- 229 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSEP- 229 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc----cccHHHHHHHhhccCC-
Confidence 5432221 2234688999999998753 467889999999999999999999863211 0111111111111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHHHcCCC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRP-----TMQRISQELLAGKT 724 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L~~~~~ 724 (740)
+.+. .....+.+++.+|++.||++|| ++.+++++-...+.
T Consensus 230 ~~~~---~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 230 PYPQ---EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred CCCc---cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 1111 1122378999999999999997 78888877544433
No 361
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=275.17 Aligned_cols=257 Identities=25% Similarity=0.324 Sum_probs=203.9
Q ss_pred Hhcccccc-eeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeee----
Q 004642 448 ATEDFHIK-YCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLH---- 520 (740)
Q Consensus 448 ~~~~~~~~-~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 520 (740)
++++|.+. ++||-|-.|.|-.+. ..+|+.+|+|++... ...++|++..-.. .|||||.++++|..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 45667664 469999999999984 457899999999653 3456788876555 79999999998874
Q ss_pred cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC---CCcEEEe
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS---NLEASVA 597 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~ 597 (740)
...+.+|||.|+||.|.+.+++.+. ..+++.++-.|++||+.|+.|||+. .|.||||||+|+|+.. +..+||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 4678999999999999999987653 3689999999999999999999998 9999999999999974 5578999
Q ss_pred ecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcc
Q 004642 598 DFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQ 677 (740)
Q Consensus 598 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
|||+|+.-..... ....+-|++|.|||++-...|+...|+||+||++|-|++|..||-......... .+...+...
T Consensus 207 DfGFAK~t~~~~~-L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp---gMk~rI~~g 282 (400)
T KOG0604|consen 207 DFGFAKETQEPGD-LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP---GMKRRIRTG 282 (400)
T ss_pred ccccccccCCCcc-ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh---hHHhHhhcc
Confidence 9999987553332 333477999999999998899999999999999999999999986544322222 222233222
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 678 RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 678 ~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
... .....|.+-.....++|+.+|..+|.+|-|..|++.+-.-
T Consensus 283 qy~-FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 283 QYE-FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred Ccc-CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 222 2233466666668899999999999999999999988753
No 362
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.3e-33 Score=294.01 Aligned_cols=263 Identities=19% Similarity=0.213 Sum_probs=193.8
Q ss_pred cceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 454 IKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
+.+.+|.|+++.||++.. +|+.||+|++...... ....+.+.+|++++++++|+||+++++++..++..+++|||+++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCS-KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 344456666666666654 7999999999765322 23457899999999999999999999999999999999999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC---
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS--- 610 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--- 610 (740)
|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||.+........
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 84 GSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999999875432 2578889999999999999999999 999999999999999999999999999876532211
Q ss_pred ----cccccccCCCcccccccccc--ccCCcchhHhHHHHHHHHHhCCCCCCccccccc----C--CCC-----Cc----
Q 004642 611 ----YRTLRAGTYGYIAPELAYTI--VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS----S--SGP-----KI---- 669 (740)
Q Consensus 611 ----~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~~----~--~~~-----~~---- 669 (740)
......++..|+|||++... .++.++|||||||++|||++|+.||........ . ... ..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 11223567889999998753 578899999999999999999999874321000 0 000 00
Q ss_pred --hhhh----hhcccCCC-cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 670 --MLID----VLNQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 670 --~~~~----~~~~~l~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
.... ..+..... ............+.+++.+||+.||++||+++|++++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~ 299 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence 0000 00000000 00000111123478899999999999999999999988765
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.8e-33 Score=297.23 Aligned_cols=270 Identities=21% Similarity=0.263 Sum_probs=201.3
Q ss_pred cHHHHHHHhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeee
Q 004642 441 LYEDLINATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCL 519 (740)
Q Consensus 441 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 519 (740)
...++..++++|++.+.||+|+||.||+|. ..+|+.||+|++...... ....+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 345667788999999999999999999995 457899999999764322 222456788999999999999999999886
Q ss_pred ec------CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 004642 520 HK------KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE 593 (740)
Q Consensus 520 ~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 593 (740)
.. ...+++++++ +++|.+++... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 43 3467888876 77888877543 478999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------C
Q 004642 594 ASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------S 664 (740)
Q Consensus 594 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~ 664 (740)
++|+|||+++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ .
T Consensus 159 ~kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 159 LKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred EEEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99999999876432 1223467889999998866 4678899999999999999999999864321100 0
Q ss_pred CCCCch--------hhhh---hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 665 SGPKIM--------LIDV---LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 665 ~~~~~~--------~~~~---~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
...... .... +..................+.+++.+|++.||++||++.+++++-...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 000000 0000 000000000000001123378999999999999999999999987654
No 364
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5e-33 Score=297.50 Aligned_cols=258 Identities=23% Similarity=0.292 Sum_probs=192.0
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec------
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK------ 521 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 521 (740)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++......+ .....+.+|++++++++||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-IFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-cchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 47899999999999999999965 468999999987543222 2245678999999999999999999998754
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
...++|+||+.. ++..+.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 346999999864 6655542 1478899999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCCch---
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPKIM--- 670 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~~~--- 670 (740)
++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .......
T Consensus 164 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 164 ARHADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CcCCCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9764321 223367889999999876 4578899999999999999999999875321100 0000000
Q ss_pred ------hhhhhcccC---CCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 671 ------LIDVLNQRL---SPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 671 ------~~~~~~~~l---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
......... ..............+.+++.+||+.||++||+++|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~ 298 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP 298 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 000000000 0000000011123377999999999999999999999873
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.6e-33 Score=289.45 Aligned_cols=258 Identities=24% Similarity=0.311 Sum_probs=197.7
Q ss_pred ccccceeeecccceEEEEEEe----CCCcEEEEEEccCCccc-chHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL----PEGKVVALKKLHHSETE-DSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCM 524 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 524 (740)
+|++.+.||+|+||.||++.. .+++.||||.++..... .....+.+.+|++++.++ +||||+++++.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999854 35788999998754322 122346788999999999 599999999999999999
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999998886543 578899999999999999999998 999999999999999999999999999876
Q ss_pred cccCCCc-ccccccCCCccccccccccc--cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC
Q 004642 605 LHVDSSY-RTLRAGTYGYIAPELAYTIV--VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP 681 (740)
Q Consensus 605 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (740)
....... .....|+..|+|||...+.. .+.++||||||+++|||++|+.||...... .................
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~ 231 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ---NSQSEISRRILKSKPPF 231 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc---chHHHHHHHHHccCCCC
Confidence 5433221 22345889999999987655 678999999999999999999998632110 00001111111111111
Q ss_pred cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 682 PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 682 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
... ....+.+++.+||+.+|++|||+.++.+.|.-.
T Consensus 232 --~~~---~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 232 --PKT---MSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred --Ccc---cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 111 112378899999999999999987776655443
No 366
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-33 Score=302.10 Aligned_cols=272 Identities=25% Similarity=0.411 Sum_probs=223.7
Q ss_pred cHHHHHHHhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeee
Q 004642 441 LYEDLINATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFC 518 (740)
Q Consensus 441 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 518 (740)
.++.+...++.|++.+.||+|.+|.||+++ .++|+.+|+|+.......+ +++..|.++++.. .|||++.++|++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d----eEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE----EEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc----HHHHHHHHHHHhccCCCCcceEEEEE
Confidence 345556678899999999999999999994 4578999999998776654 4566788888887 699999999998
Q ss_pred ee-----cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 004642 519 LH-----KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE 593 (740)
Q Consensus 519 ~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~ 593 (740)
.. ++.+|+|||||.+|+..|++.... ...+.|..+.-|.+.++.|+.+||.. .++|||||-.|||++.++.
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 74 578999999999999999998766 55799999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCcccccccCCCccccccccc-----cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCC
Q 004642 594 ASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYT-----IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPK 668 (740)
Q Consensus 594 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~ 668 (740)
||++|||.+..+..........+||+.|||||++.. ..|+.++|+||+|++..||.-|..|+.++..
T Consensus 162 VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-------- 233 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-------- 233 (953)
T ss_pred EEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch--------
Confidence 999999999887655555667789999999999863 3477789999999999999999999765432
Q ss_pred chhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChhh
Q 004642 669 IMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQKA 729 (740)
Q Consensus 669 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 729 (740)
+..-+.-++-+++....+..-..++.++|..|+..|.++||++.++++|-...+.+.++.
T Consensus 234 -mraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~~e~q 293 (953)
T KOG0587|consen 234 -MRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQPNERQ 293 (953)
T ss_pred -hhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccccHHH
Confidence 222222333344444444444555999999999999999999999999887765554443
No 367
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.7e-33 Score=290.34 Aligned_cols=260 Identities=23% Similarity=0.298 Sum_probs=198.5
Q ss_pred cccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|+..+.||+|++|.||+|... +++.||+|++...... ....+.+..|++++++++|+|++++++++.+.+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-EGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccccc-ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 556788999999999999665 5899999999875422 22346778899999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
+++ +|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.++.......
T Consensus 80 ~~~-~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 80 CDM-DLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cCc-CHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 984 8999987653 2589999999999999999999998 999999999999999999999999999987654333
Q ss_pred cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCchh---------h
Q 004642 611 YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIML---------I 672 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~~---------~ 672 (740)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||........ ........ .
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 33334567889999998766 788899999999999999999999865331100 00000000 0
Q ss_pred hhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 673 DVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 673 ~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.....................+.+++.+||..+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000000000000001112348899999999999999999999876
No 368
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4.4e-33 Score=294.20 Aligned_cols=263 Identities=25% Similarity=0.319 Sum_probs=192.2
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec------
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK------ 521 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 521 (740)
.++|++.+.||+|+||.||+|... +++.+|+|++......+. ....+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 578999999999999999999654 689999998865433221 124567899999999999999999987543
Q ss_pred --CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 522 --KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 522 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
...++|+||+++ ++...+.... ..+++.++..++.|+++||+|||+. +++|+||||+||++++++.++|+||
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 346999999975 6666665432 2589999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCc-----------ccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccccc----
Q 004642 600 GTARLLHVDSSY-----------RTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS---- 663 (740)
Q Consensus 600 G~a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~---- 663 (740)
|+++........ .....++..|+|||.+.+. .++.++|||||||++|||++|+.||........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999765432211 1123567889999987654 578899999999999999999999864322100
Q ss_pred ----CC-CCC-----chhhh----hhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 664 ----SS-GPK-----IMLID----VLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 664 ----~~-~~~-----~~~~~----~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
.. ... ..... .......+............+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00 000 00000 000001111000011112347899999999999999999999875
No 369
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.3e-32 Score=316.74 Aligned_cols=148 Identities=29% Similarity=0.466 Sum_probs=134.2
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
++|.+.+.||+|+||.||+|... +++.||+|+++............+.+|+.++..++||||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67999999999999999999655 68999999998655555555678899999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
||+++++|.+++.... .+++..++.++.||+.||+|||.+ +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997643 478889999999999999999998 99999999999999999999999999986
No 370
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-32 Score=294.76 Aligned_cols=263 Identities=22% Similarity=0.294 Sum_probs=196.9
Q ss_pred HHhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC---
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK--- 522 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 522 (740)
...++|++.+.||+|+||.||++. ..+|+.||||++..... .....+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 356789999999999999999995 45789999999865432 2233457889999999999999999999887543
Q ss_pred ---eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeec
Q 004642 523 ---CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADF 599 (740)
Q Consensus 523 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 599 (740)
..++||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 468999998 67888777542 588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCch
Q 004642 600 GTARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIM 670 (740)
Q Consensus 600 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~ 670 (740)
|++...... .....++..|+|||.+.+ ..++.++|+||+|+++|++++|+.||........ .......
T Consensus 163 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 163 GLARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred ccccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 999765322 223357889999998876 4578899999999999999999999874321100 0000000
Q ss_pred --------hhhhhccc--CCC-cchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 671 --------LIDVLNQR--LSP-PVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 671 --------~~~~~~~~--l~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
........ ..+ ............+.+++.+|++.||++||++.+++++-..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~ 301 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF 301 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccH
Confidence 00000000 000 0000001112237899999999999999999999976543
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=9.5e-33 Score=295.47 Aligned_cols=262 Identities=21% Similarity=0.282 Sum_probs=197.9
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCe---
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKC--- 523 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 523 (740)
..++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 4678999999999999999999664 5789999998754322 2234667789999999999999999998876554
Q ss_pred ---EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 524 ---MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 524 ---~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
.++|+||+ +++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 56898888652 589999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCcccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCch-
Q 004642 601 TARLLHVDSSYRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKIM- 670 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~~- 670 (740)
.+...... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ....+..
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 164 LARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred cccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 99865432 223367889999998865 3578899999999999999999999864321100 0000000
Q ss_pred -------hhhhhcc---cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 671 -------LIDVLNQ---RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 671 -------~~~~~~~---~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
....+.. ................+.+++.+|++.+|++|||+.|++++-..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~ 301 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYL 301 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCc
Confidence 0000000 00000000001113348899999999999999999999987644
No 372
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.4e-32 Score=291.11 Aligned_cols=263 Identities=22% Similarity=0.308 Sum_probs=193.1
Q ss_pred ccccceeeecccceEEEEEEeC-C--CcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeec----C
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-E--GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHK----K 522 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~ 522 (740)
+|++.+.||+|+||.||++... . ++.||+|++...... ....+.+.+|+++++++ +||||+++++.+... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4788899999999999999654 3 788999998753322 22346778899999999 599999999875432 4
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..++++||+. ++|.+++.... .+++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 5788899886 58888886433 588999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCC----cccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc--------CCCCCc
Q 004642 603 RLLHVDSS----YRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS--------SSGPKI 669 (740)
Q Consensus 603 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~--------~~~~~~ 669 (740)
+....... ......|+..|+|||+..+ ..++.++||||+||++|+|++|+.||........ ......
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 86543221 1223468999999998765 4688899999999999999999999864321000 000000
Q ss_pred hhhhh-----------hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 670 MLIDV-----------LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 670 ~~~~~-----------~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
..... ...................+.+++.+|++.||++||++.|++++-..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~ 295 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 00000 00000000000001112348899999999999999999999987643
No 373
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.5e-32 Score=293.86 Aligned_cols=263 Identities=22% Similarity=0.269 Sum_probs=193.1
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeec------
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHK------ 521 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 521 (740)
..+|.+.+.||.|+||.||+|.. .+|+.||+|++...... ..+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~---~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ---SVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCc---hHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 46899999999999999999955 46899999998665432 246788899999999999999999876643
Q ss_pred --------CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CC
Q 004642 522 --------KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-NL 592 (740)
Q Consensus 522 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~ 592 (740)
...++||||++ ++|.+++... .+++..+..++.||+.||+|||+. +++||||||+||+++. ++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 35799999997 4888777542 478999999999999999999998 9999999999999984 55
Q ss_pred cEEEeecccceecccCCC---cccccccCCCccccccccc-cccCCcchhHhHHHHHHHHHhCCCCCCccccccc-----
Q 004642 593 EASVADFGTARLLHVDSS---YRTLRAGTYGYIAPELAYT-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS----- 663 (740)
Q Consensus 593 ~~kl~DfG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~----- 663 (740)
.++++|||.++....... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 789999999976532211 1123357889999998654 4577899999999999999999999964332100
Q ss_pred --CCC-CCchh-------hhhhc---ccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 664 --SSG-PKIML-------IDVLN---QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 664 --~~~-~~~~~-------~~~~~---~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
... ..... ..... .....+...........+.+++.+|++.||++||++.|++++-...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~ 304 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence 000 00000 00000 0000000000011123477899999999999999999999876543
No 374
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=287.32 Aligned_cols=250 Identities=23% Similarity=0.310 Sum_probs=203.1
Q ss_pred ceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccC
Q 004642 455 KYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
.+.||+|.||+||-|. .++|+.||||++.+....... ..++++|+.++++++||.||.+-..|+.++..+.|||.+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 4679999999999994 457999999999886665543 37889999999999999999999999999999999999977
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC---CcEEEeecccceecccCCC
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN---LEASVADFGTARLLHVDSS 610 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~DfG~a~~~~~~~~ 610 (740)
.-|+-.+....+ ++++.....++.||+.||.|||.+ +|+|+||||+|||+... -++||+|||+|+.+.. ..
T Consensus 648 DMLEMILSsEkg--RL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-ks 721 (888)
T KOG4236|consen 648 DMLEMILSSEKG--RLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-KS 721 (888)
T ss_pred hHHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch-hh
Confidence 555555544333 688888888999999999999999 99999999999999754 3699999999999864 55
Q ss_pred cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHH
Q 004642 611 YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQD 690 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 690 (740)
+....+||+.|+|||++....|...-|+||.|||+|--++|.-||.... ++.+.+...-..-.+..|.+-
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----------dIndQIQNAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----------DINDQIQNAAFMYPPNPWSEI 791 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----------chhHHhhccccccCCCchhhc
Confidence 6677799999999999999999999999999999999999999987422 222222222211112234455
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 691 IILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 691 ~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.....++|...++..-++|-+..+-+.+.+-
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~lsh~Wl 822 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSLSHPWL 822 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhccchhh
Confidence 5558899999999999999988887766543
No 375
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-32 Score=270.74 Aligned_cols=263 Identities=21% Similarity=0.325 Sum_probs=211.6
Q ss_pred HHHHHHHhcccccceeeecccceEEEEEEeCC------CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceee
Q 004642 442 YEDLINATEDFHIKYCIGTGGYGSVYKAELPE------GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLY 515 (740)
Q Consensus 442 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 515 (740)
.+++.....+++....+-+|.||.||+|.|.+ .+.|-||.++....+- ....+..|.-.+....|||+.++.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~i--Qv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQI--QVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHH--HHHHHHHHHHHHhcCcCCCcccee
Confidence 45666667788888889999999999995543 4557788887665443 356788888888889999999999
Q ss_pred eeeee-cCeEEEEEEeccCCCchhhhc-----CCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc
Q 004642 516 GFCLH-KKCMFLIYEYMERGSLFCVLH-----DDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD 589 (740)
Q Consensus 516 ~~~~~-~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 589 (740)
+.+.+ ....+.+|.++.-|+|..++. +......++..+...++.|++.|++|||++ +|+|.||..+|.++|
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 99876 456799999999999999998 444556788899999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCcc--cccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCC
Q 004642 590 SNLEASVADFGTARLLHVDSSYR--TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSG 666 (740)
Q Consensus 590 ~~~~~kl~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~ 666 (740)
+..++||+|=.+++.+.+.+.+. .....+..||+||.+....|+.++|||||||++|||+| |+.|+.....++
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE---- 506 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE---- 506 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH----
Confidence 99999999999999887655432 22234678999999999999999999999999999999 999977544321
Q ss_pred CCchhhhhhcc--cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 667 PKIMLIDVLNQ--RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 667 ~~~~~~~~~~~--~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+ ...+.+ ++.++. .+..++..++..||+.+|++||+++|++.-|.+-
T Consensus 507 ---m-~~ylkdGyRlaQP~-----NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 507 ---M-EHYLKDGYRLAQPF-----NCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred ---H-HHHHhccceecCCC-----CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1 122222 222222 2334489999999999999999999999988653
No 376
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=2e-33 Score=278.79 Aligned_cols=275 Identities=20% Similarity=0.291 Sum_probs=207.4
Q ss_pred CCcccHHHHHHHhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCC--C----
Q 004642 437 DGKILYEDLINATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRH--R---- 509 (740)
Q Consensus 437 ~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~---- 509 (740)
+|...|+.-...+++|.+...+|+|.||.|-++ +...+..||+|+++.... ..+..+-|+++++++.+ |
T Consensus 76 dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k----YreAa~iEi~vLqki~~~DP~g~~ 151 (415)
T KOG0671|consen 76 DGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK----YREAALIEIEVLQKINESDPNGKF 151 (415)
T ss_pred CceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH----HhhHHHHHHHHHHHHHhcCCCCce
Confidence 444444444445889999999999999999999 444578999999976432 34566789999999932 2
Q ss_pred ccceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc
Q 004642 510 NIVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD 589 (740)
Q Consensus 510 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 589 (740)
-+|.+.+++...++.++|+|.+ |-++++++..+.. .+++...+..|+.|+++++++||+. +++|-||||+|||+.
T Consensus 152 rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfv 226 (415)
T KOG0671|consen 152 RCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFV 226 (415)
T ss_pred EEEeeehhhhccCceEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEe
Confidence 3788889999999999999987 5589999987554 4788999999999999999999998 999999999999984
Q ss_pred C--------------------CCcEEEeecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHH
Q 004642 590 S--------------------NLEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVL 649 (740)
Q Consensus 590 ~--------------------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 649 (740)
+ ...++|+|||.|++-. ...+..+.|..|+|||++.+..++.++||||+||||+|+.
T Consensus 227 ss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~---e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 227 SSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH---EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred ccceEEEeccCCccceeccCCCcceEEEecCCcceec---cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 2 2358999999998643 3335567899999999999999999999999999999999
Q ss_pred hCCCCCCcccccc--------cCCCCCchh-----hhh-------------------hcccCCC--cchhhhHHHHHHHH
Q 004642 650 MGTHPGGLLSSLS--------SSSGPKIML-----IDV-------------------LNQRLSP--PVNQKIVQDIILVS 695 (740)
Q Consensus 650 tg~~p~~~~~~~~--------~~~~~~~~~-----~~~-------------------~~~~l~~--~~~~~~~~~~~~l~ 695 (740)
||..-|......+ -.+.+..++ .+. +.+...+ ..-.....+...+.
T Consensus 304 tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 9998876543110 000000000 000 0000100 00111224445599
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 696 TIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 696 ~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
+++.+|+..||.+|+|+.|++.|-....
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALSHPFFAR 411 (415)
T ss_pred HHHHHHHccCccccccHHHHhcCHHhhc
Confidence 9999999999999999999999877653
No 377
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-33 Score=281.19 Aligned_cols=263 Identities=26% Similarity=0.389 Sum_probs=203.5
Q ss_pred HHhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccch----HHHHHHHHHHHHHhccCCCccceeeeeee-e
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDS----AFVKSFQNEAHVLSTVRHRNIVKLYGFCL-H 520 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~ 520 (740)
...++|-..+.||+|||+.||++ ++.+.+.||||+-.......+ ...+-..+|..+.+.+.||.||++|+|+. +
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34568888999999999999999 677788999998776544433 34556789999999999999999999997 5
Q ss_pred cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC---CCcEEEe
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS---NLEASVA 597 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~ 597 (740)
.+.++-|.|||+|.+|+-++.... .++++++..|+.||+.||.||.+. .++|||.||||.|||+.. -|.+||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence 677899999999999999987655 589999999999999999999987 679999999999999953 4679999
Q ss_pred ecccceecccCCCc-------ccccccCCCcccccccccc----ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCC
Q 004642 598 DFGTARLLHVDSSY-------RTLRAGTYGYIAPELAYTI----VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSG 666 (740)
Q Consensus 598 DfG~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~ 666 (740)
|||+++.+..++.. .+...||..|++||.+.-+ .++.|+||||.|||+|+.+.|+.||+....-..- .
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI-L 694 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI-L 694 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH-H
Confidence 99999998765442 2335799999999987633 4778999999999999999999999864321000 0
Q ss_pred CCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 667 PKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 667 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
....+...-.-.. ++.+. ...+...+|++|+++.-++|....++..+-
T Consensus 695 qeNTIlkAtEVqF-P~KPv----VsseAkaFIRRCLaYRKeDR~DV~qLA~dp 742 (775)
T KOG1151|consen 695 QENTILKATEVQF-PPKPV----VSSEAKAFIRRCLAYRKEDRIDVQQLACDP 742 (775)
T ss_pred hhhchhcceeccC-CCCCc----cCHHHHHHHHHHHHhhhhhhhhHHHHccCc
Confidence 1111111111111 11111 122367899999999999999988887654
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=8.6e-33 Score=274.74 Aligned_cols=244 Identities=25% Similarity=0.358 Sum_probs=202.8
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (740)
..+|.....||+|+||.|.++..+ +.+.||||++++...-...-++--+.|-+++... +-|.+++++.++..-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 357899999999999999999554 4678999999876543332233445677777766 67899999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||||+.||+|--+++..+ .+.+..+..+|..||-||-+||++ ||+.||||..|||++.+|++||+|||+++.--
T Consensus 428 VMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999988887765 467778888999999999999999 99999999999999999999999999998766
Q ss_pred cCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQK 686 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 686 (740)
.+.......+||+.|+|||++...+|...+|.|||||+||||+.|+.||+.. ..++....+.+.....+..
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe-------DE~elF~aI~ehnvsyPKs-- 572 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE-------DEDELFQAIMEHNVSYPKS-- 572 (683)
T ss_pred cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC-------CHHHHHHHHHHccCcCccc--
Confidence 6666667789999999999999999999999999999999999999999863 3355566777776655432
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC
Q 004642 687 IVQDIILVSTIAFACLSSQPKSRP 710 (740)
Q Consensus 687 ~~~~~~~l~~li~~cl~~dP~~RP 710 (740)
...+ ...+.+..+...|.+|.
T Consensus 573 lSkE---Av~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 573 LSKE---AVAICKGLLTKHPGKRL 593 (683)
T ss_pred ccHH---HHHHHHHHhhcCCcccc
Confidence 2222 56788888999999994
No 379
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-34 Score=271.74 Aligned_cols=253 Identities=27% Similarity=0.348 Sum_probs=192.2
Q ss_pred eeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeccC
Q 004642 456 YCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 533 (740)
..||.|+||+|++.. .+.|+..|||+++...... ..+++..|.+...+- ++||||++||.+...+..|+.||.|+-
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k--eq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~ 147 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK--EQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI 147 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH--HHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence 459999999999984 4579999999998766533 247788888765554 799999999999999999999999964
Q ss_pred CCch---hhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCC
Q 004642 534 GSLF---CVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSS 610 (740)
Q Consensus 534 g~L~---~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 610 (740)
++. .+++.-. ...+++.-.-.|..-.+.||+||.+. ..|+|||+||+|||++..|.+|++|||++-.+. ++.
T Consensus 148 -SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv-~Si 222 (361)
T KOG1006|consen 148 -SLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV-DSI 222 (361)
T ss_pred -hHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHH-HHH
Confidence 443 3333322 23577777778888899999999876 489999999999999999999999999997764 344
Q ss_pred cccccccCCCccccccccc--cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcc-hhhh
Q 004642 611 YRTLRAGTYGYIAPELAYT--IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPV-NQKI 687 (740)
Q Consensus 611 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 687 (740)
..+...|-..|||||.+.. ..|+-+|||||+|+++||+.||+.|+..... ..+.+..++....+.-. ....
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s------vfeql~~Vv~gdpp~l~~~~~~ 296 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS------VFEQLCQVVIGDPPILLFDKEC 296 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH------HHHHHHHHHcCCCCeecCcccc
Confidence 4455678899999998863 3488899999999999999999999764321 11112223322222211 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
......+.+++..|+.+|-..||.+.++.++-..
T Consensus 297 ~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fy 330 (361)
T KOG1006|consen 297 VHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFY 330 (361)
T ss_pred cccCHHHHHHHHHHhhcccccCcchhhhhcCchh
Confidence 2234458899999999999999999999877643
No 380
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-32 Score=290.31 Aligned_cols=243 Identities=24% Similarity=0.316 Sum_probs=194.8
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (740)
++.|.+...+|.|+|+.|-.+ ...+++..+||++..... .-.+|+.++... +|||++++.+.+.++.+.|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceeee
Confidence 567778888999999999888 455688999999987632 233567666665 79999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE-cCCCcEEEeecccceec
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILL-DSNLEASVADFGTARLL 605 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll-~~~~~~kl~DfG~a~~~ 605 (740)
|||++.|+-+.+.+..... .. .++..|+.+|+.|+.|||++ ||+|||+||+|||+ +..++++|+|||.++..
T Consensus 394 v~e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eehhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 9999999988877765432 22 67778999999999999999 99999999999999 69999999999999876
Q ss_pred ccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchh
Q 004642 606 HVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 685 (740)
..+ ....+-|..|.|||+.....|++++|+||||++||+|++|+.||..... . .++..+...+....
T Consensus 467 ~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~------~----~ei~~~i~~~~~s~ 533 (612)
T KOG0603|consen 467 ERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA------G----IEIHTRIQMPKFSE 533 (612)
T ss_pred chh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc------h----HHHHHhhcCCcccc
Confidence 543 2222457899999999999999999999999999999999999864211 1 22222222222222
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.-.....+++..||+.||.+||+|.++..+-..
T Consensus 534 ---~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 534 ---CVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ---ccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 122237899999999999999999999998877
No 381
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.6e-33 Score=308.45 Aligned_cols=264 Identities=27% Similarity=0.351 Sum_probs=211.1
Q ss_pred HHHHHHHhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee
Q 004642 442 YEDLINATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH 520 (740)
Q Consensus 442 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (740)
..++.-..++|.+++.||+|+||.|..++++ +++.||.|++.+-..-......-|..|..+|..-..+=|+.++-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455566789999999999999999999765 588999999987433333335788999999999999999999999999
Q ss_pred cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
...+|+|||||+||+|..++.+.+ .+++..+..++..|+-||+-+|+- |+|||||||.|||+|..|++||+|||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 999999999999999999998876 578888889999999999999988 99999999999999999999999999
Q ss_pred cceecccCCCc-ccccccCCCcccccccc----c-cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhh
Q 004642 601 TARLLHVDSSY-RTLRAGTYGYIAPELAY----T-IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDV 674 (740)
Q Consensus 601 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 674 (740)
.+-.+..+... ....+|||-|.+||++. + +.|.+.+|.||+||++|||+.|..||-..+.. .....+
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv-------eTY~KI 293 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV-------ETYGKI 293 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH-------HHHHHH
Confidence 99877655443 44568999999999986 3 56889999999999999999999998643221 112233
Q ss_pred hcc--cCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHHHHcC
Q 004642 675 LNQ--RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT---MQRISQELLAG 722 (740)
Q Consensus 675 ~~~--~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ev~~~L~~~ 722 (740)
++. .+..|......+ ...++|.+.+. +|+.|-. ++++..|.+..
T Consensus 294 m~hk~~l~FP~~~~VSe---eakdLI~~ll~-~~e~RLgrngiedik~HpFF~ 342 (1317)
T KOG0612|consen 294 MNHKESLSFPDETDVSE---EAKDLIEALLC-DREVRLGRNGIEDIKNHPFFE 342 (1317)
T ss_pred hchhhhcCCCcccccCH---HHHHHHHHHhc-ChhhhcccccHHHHHhCcccc
Confidence 333 222221111222 36677766555 6888876 99999887654
No 382
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.7e-33 Score=263.24 Aligned_cols=274 Identities=23% Similarity=0.333 Sum_probs=202.5
Q ss_pred cccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee--------
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH-------- 520 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 520 (740)
..|.-..+||+|.||+||+|+.+ +|+.||+|++..+.... .+-....+|+++++.++|+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe-GfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc-CCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 44556678999999999999554 57888998775432221 222455789999999999999999998864
Q ss_pred cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecc
Q 004642 521 KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFG 600 (740)
Q Consensus 521 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG 600 (740)
....|+|+++|++ +|..++.... ..++..++.+++.++..||.|+|.. .|+|||+||.|+|++.+|.+||+|||
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 3458999999987 7888886543 3678899999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCC----cccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCccccc--------------
Q 004642 601 TARLLHVDSS----YRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSL-------------- 661 (740)
Q Consensus 601 ~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~-------------- 661 (740)
+++.+..... ..+.++-|..|++||.+.+. .|+++.|||+.|||+.||+||.+-+...+..
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 9976643322 23445679999999998865 5889999999999999999999887644320
Q ss_pred --ccCCCCCchhhhhhccc-CCCcchhhhHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCCChhhh
Q 004642 662 --SSSSGPKIMLIDVLNQR-LSPPVNQKIVQD------IILVSTIAFACLSSQPKSRPTMQRISQELLAGKTPMQKAL 730 (740)
Q Consensus 662 --~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~------~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~ 730 (740)
.+.......+.+.+.-. ++........+. .....+++.+++..||.+|+.+.+++.+-..-+.|.+.+.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pqan 327 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQAN 327 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcchhh
Confidence 01111111111211111 100000000000 1126789999999999999999999999998888887553
No 383
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.9e-31 Score=269.95 Aligned_cols=219 Identities=21% Similarity=0.203 Sum_probs=173.0
Q ss_pred ccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCchhh
Q 004642 461 GGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSLFCV 539 (740)
Q Consensus 461 G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 539 (740)
|.+|.||++.. .+++.||+|++..... +.+|...+....|||++++++++.+.+..+++|||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 88999999954 5789999999976432 23344455556799999999999999999999999999999998
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccccCC
Q 004642 540 LHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRAGTY 619 (740)
Q Consensus 540 l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 619 (740)
+.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+...... .....++.
T Consensus 76 l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~ 146 (237)
T cd05576 76 ISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVEN 146 (237)
T ss_pred HHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCc
Confidence 86543 488999999999999999999998 9999999999999999999999999988655322 12234577
Q ss_pred CccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHH
Q 004642 620 GYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAF 699 (740)
Q Consensus 620 ~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~ 699 (740)
.|+|||...+..++.++||||+|+++|||++|+.|+....... .......++. .. ...+.+++.
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------~~~~~~~~~~----~~---~~~~~~li~ 210 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------NTHTTLNIPE----WV---SEEARSLLQ 210 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------ccccccCCcc----cC---CHHHHHHHH
Confidence 8999999988888999999999999999999998865321100 0000001111 01 123778999
Q ss_pred HcccCCCCCCCCH
Q 004642 700 ACLSSQPKSRPTM 712 (740)
Q Consensus 700 ~cl~~dP~~RPs~ 712 (740)
+|++.||++||++
T Consensus 211 ~~l~~dp~~R~~~ 223 (237)
T cd05576 211 QLLQFNPTERLGA 223 (237)
T ss_pred HHccCCHHHhcCC
Confidence 9999999999986
No 384
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=238.20 Aligned_cols=265 Identities=21% Similarity=0.304 Sum_probs=197.5
Q ss_pred ccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
.|.-.++||+|.||+||+++. .+++.||+|+++.....+. .-....+|+-+++.++|+|||++++....++..-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddeg-vpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG-VPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC-CcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 345567899999999999965 4578899999987654433 33567899999999999999999999999999999999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
||.. +|..+.....+ .++...+.+++.|+++|+.++|++ .+.|||+||+|.+++.+|+.|+.|||+++.+..+.
T Consensus 82 ~cdq-dlkkyfdslng--~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HhhH-HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 9975 77766655443 578888999999999999999999 99999999999999999999999999999887665
Q ss_pred CcccccccCCCccccccccccc-cCCcchhHhHHHHHHHHHh-CCCCCCcccc-------c--ccCCCCCc--hhhhhhc
Q 004642 610 SYRTLRAGTYGYIAPELAYTIV-VTGKCDVYSFGVVALEVLM-GTHPGGLLSS-------L--SSSSGPKI--MLIDVLN 676 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~ellt-g~~p~~~~~~-------~--~~~~~~~~--~~~~~~~ 676 (740)
...+..+-|..|++|.++.+.. |++..|+||.|||+.|+.. |++-|....- + -.....+. .+...-|
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 5555667899999999998765 7888999999999999997 4444432210 0 00000010 0111111
Q ss_pred ccCCC--cchhhhHHHHHH----HHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 677 QRLSP--PVNQKIVQDIIL----VSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 677 ~~l~~--~~~~~~~~~~~~----l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
-..-+ +....+.+-.+. =++++.+.+.-+|.+|.++++.+++--..
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~ 287 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFS 287 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccc
Confidence 11111 111112222222 34677888888999999999998875443
No 385
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=256.99 Aligned_cols=260 Identities=22% Similarity=0.342 Sum_probs=215.4
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (740)
.++|...+.||.|+|..|..++++ +.+.||+|++++....+.+-.+....|-.+..+- +||.+|-++.++.....+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467899999999999999999765 5678999999988777777778888898888877 79999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|.||++||+|--++++.. .++++.+..+...|+-||.|||+. ||+.||+|..|+|+|..|++|++|+|+++.--
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999976666544 688888888999999999999999 99999999999999999999999999998765
Q ss_pred cCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCC-CCCchhhhhhcccCCCcchh
Q 004642 607 VDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSS-GPKIMLIDVLNQRLSPPVNQ 685 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~ 685 (740)
.+....+..+||+.|.|||++.+..|...+|.|++||+++||+.|+.||+....-.... ..+..+.-++.+.++.+...
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee
Confidence 55556677899999999999999999999999999999999999999999765322222 23344445556655554322
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCC------CHHHHHHHH
Q 004642 686 KIVQDIILVSTIAFACLSSQPKSRP------TMQRISQEL 719 (740)
Q Consensus 686 ~~~~~~~~l~~li~~cl~~dP~~RP------s~~ev~~~L 719 (740)
..+...+++.-+.+||.+|. .++++..+-
T Consensus 483 -----svkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ 517 (593)
T KOG0695|consen 483 -----SVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHA 517 (593)
T ss_pred -----ehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcch
Confidence 12356788889999999984 455655543
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3e-30 Score=261.53 Aligned_cols=240 Identities=29% Similarity=0.415 Sum_probs=193.0
Q ss_pred cceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCchhhh
Q 004642 462 GYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSLFCVL 540 (740)
Q Consensus 462 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l 540 (740)
+||.||+|... +|+.+|+|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999776 489999999987554332 478899999999999999999999999999999999999999999998
Q ss_pred cCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccccCCC
Q 004642 541 HDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRAGTYG 620 (740)
Q Consensus 541 ~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~ 620 (740)
.... .+++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||.+....... ......++..
T Consensus 79 ~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 151 (244)
T smart00220 79 KKRG---RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPE 151 (244)
T ss_pred Hhcc---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcC
Confidence 7644 278999999999999999999998 99999999999999999999999999998765432 2334468889
Q ss_pred ccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHH
Q 004642 621 YIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFA 700 (740)
Q Consensus 621 y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~ 700 (740)
|++||...+..++.++||||+|++++++++|..||.... ......+.+.......... .......+.+++.+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~ 223 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-------QLLELFKKIGKPKPPFPPP-EWKISPEAKDLIRK 223 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHhccCCCCccc-cccCCHHHHHHHHH
Confidence 999999988888999999999999999999999976421 1111222222111111100 00012237889999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 004642 701 CLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 701 cl~~dP~~RPs~~ev~~~ 718 (740)
|+..+|++||++.+++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 224 LLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HccCCchhccCHHHHhhC
Confidence 999999999999999874
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.1e-30 Score=293.18 Aligned_cols=266 Identities=19% Similarity=0.223 Sum_probs=172.9
Q ss_pred HhcccccceeeecccceEEEEEEeC-C----CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeee-----
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-E----GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGF----- 517 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~----- 517 (740)
..++|.+.+.||+|+||.||+|... + +..||+|++...... +....| .+....+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 4678999999999999999999664 4 689999988643321 111111 1112222222222211
Q ss_pred -eeecCeEEEEEEeccCCCchhhhcCCCcc-----------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 004642 518 -CLHKKCMFLIYEYMERGSLFCVLHDDDEA-----------------IELNWTKRVNIVKSVAHALSYLHHDCTLSIIHR 579 (740)
Q Consensus 518 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 579 (740)
...+...++||||+++++|.++++..... .......+..++.||+.||+|||++ +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 24566799999999999999988754211 0112344567999999999999998 99999
Q ss_pred CCCCCceEEcC-CCcEEEeecccceecccCCC-cccccccCCCcccccccccc----------------------ccCCc
Q 004642 580 DISSNNILLDS-NLEASVADFGTARLLHVDSS-YRTLRAGTYGYIAPELAYTI----------------------VVTGK 635 (740)
Q Consensus 580 dlkp~NIll~~-~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~----------------------~~~~~ 635 (740)
||||+|||++. ++.+||+|||+|+.+..... ......+++.|+|||.+... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999986 57899999999986543222 22345789999999965322 23446
Q ss_pred chhHhHHHHHHHHHhCCCCCCcccc-----cccCCCCCchhhhhhcccCCCcch---hhhHHHHHHHHHHHHHcccCCCC
Q 004642 636 CDVYSFGVVALEVLMGTHPGGLLSS-----LSSSSGPKIMLIDVLNQRLSPPVN---QKIVQDIILVSTIAFACLSSQPK 707 (740)
Q Consensus 636 ~DvwslGvil~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~l~~li~~cl~~dP~ 707 (740)
+||||+||++|||+++..|++.... +.........+.........+... ...........+++.+|++.||+
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 7999999999999998777542110 000000111111111111111000 00000111245899999999999
Q ss_pred CCCCHHHHHHHHHcCC
Q 004642 708 SRPTMQRISQELLAGK 723 (740)
Q Consensus 708 ~RPs~~ev~~~L~~~~ 723 (740)
+|||++|+++|-....
T Consensus 440 kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 440 QRISAKAALAHPYFDR 455 (566)
T ss_pred cCCCHHHHhCCcCcCC
Confidence 9999999999976543
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5e-32 Score=276.03 Aligned_cols=255 Identities=23% Similarity=0.349 Sum_probs=207.5
Q ss_pred cccccceeeecccceEEEEEEeCCCc-EEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPEGK-VVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~g~-~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.+++.+..||.|+||.|=++.....+ .+|+|.+++...-+....+-...|-.+|...+.|.||++|-.|.+.+..|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34556677999999999999775444 38889888766655555567788999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccC
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVD 608 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 608 (740)
|-|-||.++..+.+.+ .++......++..++.|++|||++ +||.|||||+|.+++.+|.+||.|||+|+.+...
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999998765 577788888999999999999999 9999999999999999999999999999998755
Q ss_pred CCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC-cchhhh
Q 004642 609 SSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP-PVNQKI 687 (740)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~ 687 (740)
.... .++||+.|.|||++....++..+|.||+|+++||+++|.+||...... .....+-+.+.. ..+..+
T Consensus 574 ~KTw-TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm--------ktYn~ILkGid~i~~Pr~I 644 (732)
T KOG0614|consen 574 RKTW-TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM--------KTYNLILKGIDKIEFPRRI 644 (732)
T ss_pred Ccee-eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH--------HHHHHHHhhhhhhhccccc
Confidence 5443 459999999999999999999999999999999999999999764331 122222222211 111112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHcC
Q 004642 688 VQDIILVSTIAFACLSSQPKSRPT-----MQRISQELLAG 722 (740)
Q Consensus 688 ~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~L~~~ 722 (740)
... ..+++++.+..+|.+|-. ..++.+|-+..
T Consensus 645 ~k~---a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~ 681 (732)
T KOG0614|consen 645 TKT---ATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFE 681 (732)
T ss_pred chh---HHHHHHHHHhcCcHhhhccccCChHHHHhhhhhh
Confidence 222 568899999999999964 78888887543
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=3.4e-30 Score=281.61 Aligned_cols=269 Identities=16% Similarity=0.213 Sum_probs=184.9
Q ss_pred HhcccccceeeecccceEEEEEEe-----------------CCCcEEEEEEccCCcccch-H----------HHHHHHHH
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAEL-----------------PEGKVVALKKLHHSETEDS-A----------FVKSFQNE 499 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~-~----------~~~~~~~E 499 (740)
..++|.+.++||+|+||.||+|.. ..++.||||++........ + ..+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 367899999999999999999953 2457899999865432110 0 01223447
Q ss_pred HHHHhccCCCcc-----ceeeeeeee--------cCeEEEEEEeccCCCchhhhcCCCc---------------------
Q 004642 500 AHVLSTVRHRNI-----VKLYGFCLH--------KKCMFLIYEYMERGSLFCVLHDDDE--------------------- 545 (740)
Q Consensus 500 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------- 545 (740)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777753 3568999999999999999874311
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcc-cccccCCCcccc
Q 004642 546 AIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYR-TLRAGTYGYIAP 624 (740)
Q Consensus 546 ~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~-~~~~gt~~y~aP 624 (740)
...++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... ....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 11356788999999999999999998 99999999999999999999999999997654322211 122347899999
Q ss_pred cccccccc----------------------CCcchhHhHHHHHHHHHhCCC-CCCcccccccCCC-CCch---hhhhhcc
Q 004642 625 ELAYTIVV----------------------TGKCDVYSFGVVALEVLMGTH-PGGLLSSLSSSSG-PKIM---LIDVLNQ 677 (740)
Q Consensus 625 E~~~~~~~----------------------~~~~DvwslGvil~elltg~~-p~~~~~~~~~~~~-~~~~---~~~~~~~ 677 (740)
|.+..... ..+.||||+||++|+|++|.. ||.....+..... .+.. +......
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 98753221 124799999999999999985 6653322111000 0111 1111111
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHcccCCC---CCCCCHHHHHHHHHcC
Q 004642 678 RLSPPVNQKIVQDIILVSTIAFACLSSQP---KSRPTMQRISQELLAG 722 (740)
Q Consensus 678 ~l~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~ev~~~L~~~ 722 (740)
...... .........+++.+++..+| .+|+|++|+++|-...
T Consensus 460 ~~~~~~---~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 460 KYDFSL---LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred CCCccc---ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 111111 11222347789999999766 6899999999986543
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=287.83 Aligned_cols=246 Identities=25% Similarity=0.352 Sum_probs=188.9
Q ss_pred ccceeeecccce-EEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEe
Q 004642 453 HIKYCIGTGGYG-SVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 453 ~~~~~lg~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
.-.+.+|.|+.| .||+|.. +|+.||||++..... +.+.+|++.++.- +|||||++++.-.++.+.|+..|.
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~------~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEFF------DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred ccHHHcccCCCCcEEEEEee-CCceehHHHHhhHhH------HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 334568999987 5699987 789999999976543 5677999999988 699999999999999999999999
Q ss_pred ccCCCchhhhcCCCccc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC---C--CcEEEeeccccee
Q 004642 531 MERGSLFCVLHDDDEAI-ELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS---N--LEASVADFGTARL 604 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~---~--~~~kl~DfG~a~~ 604 (740)
|.. +|.+++....... ...-...+.+..|++.||++||+- +||||||||+|||++. + ..++|+|||+++.
T Consensus 585 C~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 CAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred hhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 976 9999998741111 111134567889999999999997 9999999999999986 3 4689999999999
Q ss_pred cccCCCcc---cccccCCCccccccccccccCCcchhHhHHHHHHHHHhC-CCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 605 LHVDSSYR---TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMG-THPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 605 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
+..+.... ....||-+|+|||++....-+.++||||+||++|+.++| .+||+....-. .+++.....
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~---------~NIl~~~~~ 731 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ---------ANILTGNYT 731 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh---------hhhhcCccc
Confidence 87654432 334699999999999988888899999999999999996 89998643210 111111110
Q ss_pred CcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004642 681 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELL 720 (740)
Q Consensus 681 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 720 (740)
-........+ +..++|.+|++.+|..||+|.+|+.|..
T Consensus 732 L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPl 769 (903)
T KOG1027|consen 732 LVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNHPL 769 (903)
T ss_pred eeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhCCCc
Confidence 0000000111 4789999999999999999999998764
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-30 Score=237.67 Aligned_cols=203 Identities=27% Similarity=0.386 Sum_probs=164.7
Q ss_pred hcccccceeeecccceEEEEEEe-CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAEL-PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (740)
.+.......||.|+||.|-+.++ .+|+..|+|++....... ..++..+|+.+..+- .+|.+|.++|.+...+..++
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q--~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQ--EQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChH--HHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 34444456699999999988854 579999999998765432 246677788876654 79999999999999999999
Q ss_pred EEEeccCCCchhhhcC-CCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 527 IYEYMERGSLFCVLHD-DDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
.||.|+. +|..+-.+ .+....+++.-+-+|+..|.+||.|||++ ..++|||+||+|||++.+|++|+||||.+-.+
T Consensus 123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceee
Confidence 9999975 66544321 12233678888999999999999999997 58999999999999999999999999999876
Q ss_pred ccCCCcccccccCCCccccccccc----cccCCcchhHhHHHHHHHHHhCCCCCCc
Q 004642 606 HVDSSYRTLRAGTYGYIAPELAYT----IVVTGKCDVYSFGVVALEVLMGTHPGGL 657 (740)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~elltg~~p~~~ 657 (740)
. ++-..+...|...|||||.+.. ..|+.|+||||+|+++.||.+++.|++.
T Consensus 200 ~-dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 200 V-DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred h-hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 5 3444455578889999998763 3688899999999999999999999764
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.1e-29 Score=264.74 Aligned_cols=204 Identities=25% Similarity=0.361 Sum_probs=174.2
Q ss_pred cccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
.-|..++.||-|+||+|.++ +.++...||.|.+.+...-....+.-.+.|..||..-..+=||++|-.|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 45666788999999999999 45556789999998766655555667788999999999999999999999999999999
Q ss_pred EeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc--
Q 004642 529 EYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH-- 606 (740)
Q Consensus 529 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~-- 606 (740)
||++||++-.+|-+.+ .+.+..+..++.++..|+++.|+. |+|||||||.|||+|.||++||+|||+++-+.
T Consensus 709 dYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999887765 467777888899999999999988 99999999999999999999999999986321
Q ss_pred -------cCCCc---------------------------------ccccccCCCccccccccccccCCcchhHhHHHHHH
Q 004642 607 -------VDSSY---------------------------------RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVAL 646 (740)
Q Consensus 607 -------~~~~~---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ 646 (740)
..+.. ....+||+.|+|||++....++.-+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 10000 01124999999999999999999999999999999
Q ss_pred HHHhCCCCCCccc
Q 004642 647 EVLMGTHPGGLLS 659 (740)
Q Consensus 647 elltg~~p~~~~~ 659 (740)
||+.|+.||-...
T Consensus 863 em~~g~~pf~~~t 875 (1034)
T KOG0608|consen 863 EMLVGQPPFLADT 875 (1034)
T ss_pred HHhhCCCCccCCC
Confidence 9999999997644
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.9e-30 Score=236.84 Aligned_cols=259 Identities=19% Similarity=0.263 Sum_probs=196.6
Q ss_pred HhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecC--e
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKK--C 523 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 523 (740)
..++|++.+++|.|.|++||.| ...+.+.++||+++... .+.+.+|+++++.++ ||||+++++...++. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 3578999999999999999999 45678889999998654 367899999999996 999999999998754 5
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CcEEEeecccc
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN-LEASVADFGTA 602 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~DfG~a 602 (740)
..+++||+.+.+...+-. .++...+...+.+++.||+|+|+. ||.|||+||.|+++|.. -..+|+|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchH
Confidence 789999999876654332 356667888999999999999999 99999999999999954 56999999999
Q ss_pred eecccCCCcccccccCCCccccccccccc-cCCcchhHhHHHHHHHHHhCCCCCCcccccc-------------------
Q 004642 603 RLLHVDSSYRTLRAGTYGYIAPELAYTIV-VTGKCDVYSFGVVALEVLMGTHPGGLLSSLS------------------- 662 (740)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~------------------- 662 (740)
.++.+... .+.++.+..|..||.+...+ |+..-|+|||||++..|+..+.||-...+-.
T Consensus 181 EFYHp~~e-YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 181 EFYHPGKE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hhcCCCce-eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 99875443 35557888999999987654 6677899999999999999999974322100
Q ss_pred --cCCCCCchhhhhhcccCCCcchhhhH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 663 --SSSGPKIMLIDVLNQRLSPPVNQKIV-----QDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 663 --~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....-+....+++.+..+.+...... -...+..+++.+.+..|-.+|+|++|.+.|-...
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~ 326 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA 326 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence 00001111222232222211111100 0123477899999999999999999999886543
No 394
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=1.6e-29 Score=307.29 Aligned_cols=306 Identities=41% Similarity=0.593 Sum_probs=192.3
Q ss_pred HHHHHHhc-------CCCCcCCCCCCCCCCCccceeeeCCCCCEEEEEcCCCCcccc-----------------------
Q 004642 42 IERQALLN-------SGWWKDRIPHNSSDHCNWVGITCDYEGRITDIDLLNSNIKGE----------------------- 91 (740)
Q Consensus 42 ~~~~~l~~-------~~~~~~~~~~~~~~~c~w~gv~c~~~~~v~~l~l~~~~l~~~----------------------- 91 (740)
.|++||+. ...+...|. .+.|||.|.||+|+..++|+.|+|.++++.+.
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~ 107 (968)
T PLN00113 29 EELELLLSFKSSINDPLKYLSNWN-SSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSG 107 (968)
T ss_pred HHHHHHHHHHHhCCCCcccCCCCC-CCCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCC
Confidence 57777764 112223332 35689999999999878899888887766543
Q ss_pred -ccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhc
Q 004642 92 -LGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIG 170 (740)
Q Consensus 92 -~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 170 (740)
++...|..+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..++
T Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 185 (968)
T PLN00113 108 PIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT 185 (968)
T ss_pred cCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhh
Confidence 3333455777888888888887766653 4466666777766666666666666666666666666666666666666
Q ss_pred cccccceeecccccccccCCCccccccc-----CCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCee
Q 004642 171 NLKSLTELYVTNNALGGLIPSTLFRLTN-----ISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNL 245 (740)
Q Consensus 171 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~-----l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 245 (740)
++++|++|+|++|++++.+|..+.++.+ ++.|++.+.+|..++++++|++|+|++|++++.+|..++++++|+.|
T Consensus 186 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 265 (968)
T PLN00113 186 NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYL 265 (968)
T ss_pred hCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEE
Confidence 6666666666666666666665555442 35566666666666666666666666666666666666666666666
Q ss_pred cccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccceEEecCCccc
Q 004642 246 NLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLS 325 (740)
Q Consensus 246 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 325 (740)
+|++|++++.+|..+.++++|+.|++++|.+++.+|..+.++++|+.|++++|.+++.+|..+..+++|+.|++++|+++
T Consensus 266 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 345 (968)
T PLN00113 266 FLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFS 345 (968)
T ss_pred ECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCc
Confidence 66666666656666666666666666666666556655556666666666666665555555555555555555555555
Q ss_pred CCCCCCCccc----cccCCCCCCCCCcCc
Q 004642 326 GTIPKTLRPM----YVDLSFNNLEGEIPT 350 (740)
Q Consensus 326 ~~~p~~~~~~----~l~ls~N~l~~~~p~ 350 (740)
+.+|..+... .+++++|++++.+|.
T Consensus 346 ~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~ 374 (968)
T PLN00113 346 GEIPKNLGKHNNLTVLDLSTNNLTGEIPE 374 (968)
T ss_pred CcCChHHhCCCCCcEEECCCCeeEeeCCh
Confidence 5555443322 244455544444443
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-31 Score=248.48 Aligned_cols=263 Identities=25% Similarity=0.301 Sum_probs=194.2
Q ss_pred cccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-----eEE
Q 004642 452 FHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK-----CMF 525 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 525 (740)
.+-.+.||-|+||.||.+. -++|+.||.|++...... -...+++.+|.+++...+|.|++..++...-.. +.|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~-L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQN-LASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHH-HHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 3446779999999999994 457999999999764432 234578889999999999999999888765432 457
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceec
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLL 605 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~ 605 (740)
.++|.|.. +|.+.+-... .++-..+.-+..||++||+|||+. +|.||||||.|.|++.++..||+|||+|+..
T Consensus 134 V~TELmQS-DLHKIIVSPQ---~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSPQ---ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHHh-hhhheeccCC---CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccccc
Confidence 77887754 6766665433 577777888999999999999998 9999999999999999999999999999976
Q ss_pred ccCC-CcccccccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccc---------cCCC-------C
Q 004642 606 HVDS-SYRTLRAGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLS---------SSSG-------P 667 (740)
Q Consensus 606 ~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~---------~~~~-------~ 667 (740)
..+. ...+..+-|.+|+|||.+++. .|+.+.||||.|||+.|++-++.-|....... .... -
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 5443 334555678999999999976 58889999999999999998888776443211 0011 1
Q ss_pred CchhhhhhcccCCCcchhh------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 668 KIMLIDVLNQRLSPPVNQK------IVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 668 ~~~~~~~~~~~l~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
+.....+++....++.... ......+...+...++..||++|.+.++.+.++...
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 1222233333333222110 011122355677889999999999999998887544
No 396
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=245.34 Aligned_cols=261 Identities=25% Similarity=0.317 Sum_probs=197.0
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecC-----
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK----- 522 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 522 (740)
..+|.-.+.+|.|.- .|..+ +.-.++.||+|+...+...... .++..+|..++..++|+|+++++.++.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~-akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTH-AKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCcc-chhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 356666777888888 55555 4446899999999876444332 467789999999999999999999987543
Q ss_pred -eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 523 -CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 523 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
..|+|||+|.. +|...++. +++-.++..++.|++.|++|||+. ||+||||||+||++..++..||.|||+
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 57999999975 78777762 467788899999999999999998 999999999999999999999999999
Q ss_pred ceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccccccc-------CCCCC------
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSS-------SSGPK------ 668 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-------~~~~~------ 668 (740)
|+.-..+ -..+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|........ ...++
T Consensus 165 ar~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 165 ARTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred hcccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 9875543 344556789999999999999999999999999999999999987764322100 00011
Q ss_pred -----------------chhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 669 -----------------IMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 669 -----------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
..+.+.+.....+........+...+.+++.+||-.+|++|.+++++++|.-.
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~ 313 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI 313 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence 11111111111111111111222347899999999999999999999998743
No 397
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-28 Score=249.18 Aligned_cols=133 Identities=25% Similarity=0.483 Sum_probs=113.7
Q ss_pred hcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-----C---Cccceeeeeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-----H---RNIVKLYGFCL 519 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~ 519 (740)
..+|.+.++||-|.|++||++ +....+.||+|+.+... .+.+....|++++++++ | ..||++++.|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 368999999999999999999 55677899999997644 44677889999999983 3 47999999998
Q ss_pred e----cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc
Q 004642 520 H----KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD 589 (740)
Q Consensus 520 ~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 589 (740)
. +.+++||+|++ |.+|..+|...... .++...+.+|++||+.||.|||.+| ||||.||||+|||+.
T Consensus 153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~Yr-Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSNYR-GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred ecCCCCcEEEEEehhh-hhHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 5 45899999998 56888888765543 5889999999999999999999997 999999999999994
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.3e-27 Score=236.42 Aligned_cols=212 Identities=35% Similarity=0.599 Sum_probs=184.4
Q ss_pred eecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCc
Q 004642 458 IGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSL 536 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 536 (740)
||+|++|.||++...+ ++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 6899999999997654 8999999998765432 246788999999999999999999999999999999999999999
Q ss_pred hhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCcEEEeecccceecccCCCccccc
Q 004642 537 FCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-NLEASVADFGTARLLHVDSSYRTLR 615 (740)
Q Consensus 537 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~ 615 (740)
.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.............
T Consensus 79 ~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 79 KDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred HHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 99987643 2578999999999999999999999 9999999999999999 8999999999998765433223334
Q ss_pred ccCCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHH
Q 004642 616 AGTYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILV 694 (740)
Q Consensus 616 ~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 694 (740)
.+...|++||..... ..+.++|+|++|+++++| ..+
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~ 190 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PEL 190 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHH
Confidence 678899999998877 788899999999999999 237
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 695 STIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 695 ~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.+++.+|++.+|++||++.++++++
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhCC
Confidence 7899999999999999999998753
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=255.37 Aligned_cols=199 Identities=27% Similarity=0.385 Sum_probs=169.9
Q ss_pred hcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHH-----HHHHHHHHHHhccC---CCccceeeeeee
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFV-----KSFQNEAHVLSTVR---HRNIVKLYGFCL 519 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~-----~~~~~E~~~l~~l~---h~niv~l~~~~~ 519 (740)
..+|...+.+|.|+||.|+.+.++ +...|++|.+.+++.-...+. -..-.|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 456899999999999999999655 467799999987554322222 23456999999997 999999999999
Q ss_pred ecCeEEEEEEec-cCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEee
Q 004642 520 HKKCMFLIYEYM-ERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVAD 598 (740)
Q Consensus 520 ~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 598 (740)
+++.+|++||-. ++.+|.+++.... .+++.++.-|++||+.|+++||++ +|+|||||-+||.++.+|-+||+|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 999999999975 5668999997654 689999999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCcccccccCCCccccccccccccCC-cchhHhHHHHHHHHHhCCCCC
Q 004642 599 FGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTG-KCDVYSFGVVALEVLMGTHPG 655 (740)
Q Consensus 599 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslGvil~elltg~~p~ 655 (740)
||.|.... +......+||..|.|||++.+..|-. .-|||++|+++|.++....||
T Consensus 714 fgsaa~~k--sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 714 FGSAAYTK--SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred ccchhhhc--CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 99997653 33445668999999999999988754 479999999999999998886
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-29 Score=262.18 Aligned_cols=255 Identities=28% Similarity=0.423 Sum_probs=202.4
Q ss_pred HhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
..++|+....+|.|.||.|||++ ...++..|+|+++.....+. +-..+|+-+++..+|||||.++|.+...+..++
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~---~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDF---SGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccc---cccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 45688899999999999999994 45789999999987765543 556789999999999999999999999999999
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
.||||.+|+|.+.-|-.+ ++++.++..+.+..++|++|||+. +-+|||||-.||++++.|.+|+.|||.+-.+.
T Consensus 90 cMEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred EEEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhh
Confidence 999999999988776544 688899999999999999999998 99999999999999999999999999998776
Q ss_pred cCCCcccccccCCCcccccccc---ccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcc
Q 004642 607 VDSSYRTLRAGTYGYIAPELAY---TIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPV 683 (740)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 683 (740)
.--.....+.||++|||||+.. .+.|..++|||+.|+...|+---+.|--.... .+ .+.-.-.....++.
T Consensus 164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp-----mr--~l~LmTkS~~qpp~ 236 (829)
T KOG0576|consen 164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP-----MR--ALFLMTKSGFQPPT 236 (829)
T ss_pred hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch-----HH--HHHHhhccCCCCCc
Confidence 5555566779999999999864 55788999999999999999877766211110 00 00000011111111
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
..+...-...+.++++.|+..+|++||+++.++++
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 11122223348899999999999999999988774
No 401
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=1.5e-28 Score=251.38 Aligned_cols=274 Identities=19% Similarity=0.211 Sum_probs=210.9
Q ss_pred CCcccHHHHHHHhcccccceeeecccceEEEEEE-eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCC------C
Q 004642 437 DGKILYEDLINATEDFHIKYCIGTGGYGSVYKAE-LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRH------R 509 (740)
Q Consensus 437 ~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~ 509 (740)
.|.+.+.--+....+|.+....|+|-|++|.+|. ...|..||||++...... .+.=..|+++|++++. -
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKF 494 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhh
Confidence 3445554445566899999999999999999994 445889999999876554 3555689999999952 4
Q ss_pred ccceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc
Q 004642 510 NIVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD 589 (740)
Q Consensus 510 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~ 589 (740)
|+++++-.|....++|||+|-+.- +|.+++...+....+....+..++.|+.-||..|-.. +|+|.||||.|||++
T Consensus 495 Hclrl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVN 570 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEec
Confidence 899999999999999999998854 8999999998888899999999999999999999988 999999999999999
Q ss_pred CCC-cEEEeecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccc--------
Q 004642 590 SNL-EASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSS-------- 660 (740)
Q Consensus 590 ~~~-~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~-------- 660 (740)
+.. .+||||||.|.+...+ ..+...-+..|.|||++.|.+|+...|+||.||+|||+.||+.-|...+.
T Consensus 571 E~k~iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m 648 (752)
T KOG0670|consen 571 ESKNILKLCDFGSASFASEN--EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM 648 (752)
T ss_pred cCcceeeeccCccccccccc--cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence 754 5799999999776432 22333556789999999999999999999999999999999987754321
Q ss_pred --------------------ccc----------CCC------------CCchhhhhhcccCCCcchhhhHHHHHHHHHHH
Q 004642 661 --------------------LSS----------SSG------------PKIMLIDVLNQRLSPPVNQKIVQDIILVSTIA 698 (740)
Q Consensus 661 --------------------~~~----------~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li 698 (740)
+.. ... +-..+...+-.. +..+.........+.+++
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~--q~~~deq~~~~~~~rdLL 726 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAV--QRLPDEQPKIVQQLRDLL 726 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhcc--CCCCchhHHHHHHHHHHH
Confidence 000 000 000011111000 112222333444588999
Q ss_pred HHcccCCCCCCCCHHHHHHHHHcC
Q 004642 699 FACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 699 ~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..|+..||++|.|..|.++|.+..
T Consensus 727 dkml~LdP~KRit~nqAL~HpFi~ 750 (752)
T KOG0670|consen 727 DKMLILDPEKRITVNQALKHPFIT 750 (752)
T ss_pred HHHhccChhhcCCHHHHhcCCccc
Confidence 999999999999999999886654
No 402
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=8.1e-29 Score=256.71 Aligned_cols=282 Identities=24% Similarity=0.261 Sum_probs=212.0
Q ss_pred CCCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccc
Q 004642 75 EGRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGL 154 (740)
Q Consensus 75 ~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 154 (740)
.|+++.|+|.+|-|+. +....++.++.|++||||.|.|+.+.-+.|..-.++++|+|++|+|+.+..+.|.++.+|.+|
T Consensus 124 sghl~~L~L~~N~I~s-v~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tl 202 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISS-VTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTL 202 (873)
T ss_pred ccceeEEeeecccccc-ccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheee
Confidence 4789999998887764 444467888889999999999987766778777889999999999988888888888899999
Q ss_pred ccccccccCCChhhhccccccceeecccccccccCCCccccccc-----CCCccccCCCCccccccCCCCEEecCCCcCC
Q 004642 155 FLYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTN-----ISSNQFHSSIPLEIGNFSALDTLDLSDNKIH 229 (740)
Q Consensus 155 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-----l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 229 (740)
.|++|+|+...+..|.+|++|+.|+|..|+|.-..-.+|.++.+ |..|.++..--..|-.+.++++|+|+.|+++
T Consensus 203 kLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 203 KLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred ecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 99999999888888888999999999999887555556655543 4577777666667777778888888888887
Q ss_pred CcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcc
Q 004642 230 GIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMG 309 (740)
Q Consensus 230 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 309 (740)
..-.+++.+|++|+.|+||+|.|..+-+..+.-+++|++|+|++|+|+...++.|..+..|++|+|++|.++..-...|.
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHH
Confidence 77777777788888888888888777777777777788888888888777777777777777777777777755556677
Q ss_pred cccccceEEecCCcccCCCCCCC---ccc----cccCCCCCCCCCcCccccCCCC
Q 004642 310 KILLLQNLDLSHNNLSGTIPKTL---RPM----YVDLSFNNLEGEIPTYLRGNPP 357 (740)
Q Consensus 310 ~l~~L~~L~l~~N~l~~~~p~~~---~~~----~l~ls~N~l~~~~p~~~~~~~~ 357 (740)
.+.+|+.|||++|.|+..+.+.- ..+ .+++-+|+|....-..|.|++.
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~ 417 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEA 417 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcc
Confidence 77777777777777776554421 111 3667777775322224444443
No 403
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-28 Score=255.64 Aligned_cols=258 Identities=28% Similarity=0.328 Sum_probs=148.5
Q ss_pred CEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccc
Q 004642 77 RITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFL 156 (740)
Q Consensus 77 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (740)
.+..|||+.|.|. +++...|..-.++++|+|++|.|+....+.|.++.+|.+|.|+.|+|+.+.+..|.+|++|+.|+|
T Consensus 150 alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdL 228 (873)
T KOG4194|consen 150 ALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDL 228 (873)
T ss_pred hhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhc
Confidence 4556777776664 555556666677777777777777777777777777777777777777777777777777777777
Q ss_pred ccccccCCChhhhccccccceeecccccccccCCCcccccc-----cC------------------------CCccccCC
Q 004642 157 YSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLT-----NI------------------------SSNQFHSS 207 (740)
Q Consensus 157 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~l------------------------~~n~l~~~ 207 (740)
..|+|.-.---.|.+|++|+.|.|..|.+.......|..+. +| +.|.|..+
T Consensus 229 nrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ri 308 (873)
T KOG4194|consen 229 NRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRI 308 (873)
T ss_pred cccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhhee
Confidence 77777644344566666666666666666555555544432 23 44444444
Q ss_pred CCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCc---cc
Q 004642 208 IPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPT---EI 284 (740)
Q Consensus 208 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~---~l 284 (740)
-++...-+++|++|+|++|+|+...++.|..|..|+.|+|++|.++......|..+.+|+.|||++|.|++.|.+ .|
T Consensus 309 h~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f 388 (873)
T KOG4194|consen 309 HIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAF 388 (873)
T ss_pred ecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhh
Confidence 444444444555555555555544444444455555555555555444444444555555555555555443332 24
Q ss_pred ccCCCCCeEeccCCCCCCCCchhcccccccceEEecCCcccCCCCCCCccc
Q 004642 285 GNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLSGTIPKTLRPM 335 (740)
Q Consensus 285 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 335 (740)
.++++|+.|+|.+|+|....-..|..++.|+.|||.+|.|...-|..|.++
T Consensus 389 ~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 389 NGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM 439 (873)
T ss_pred ccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc
Confidence 445555555555555553333445555555555555555555555554443
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=4.8e-26 Score=228.00 Aligned_cols=199 Identities=34% Similarity=0.526 Sum_probs=172.2
Q ss_pred cccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
|.+.+.||+|++|.||++...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5667889999999999997765 899999999865443 2357888999999999999999999999999999999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC-
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS- 609 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~- 609 (740)
+++++|.+++..... .+++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 79 CEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred cCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999999876542 178999999999999999999998 99999999999999999999999999998775432
Q ss_pred CcccccccCCCccccccc-cccccCCcchhHhHHHHHHHHHhCCCCCCc
Q 004642 610 SYRTLRAGTYGYIAPELA-YTIVVTGKCDVYSFGVVALEVLMGTHPGGL 657 (740)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~elltg~~p~~~ 657 (740)
.......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334678899999998 666778899999999999999999999854
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.1e-27 Score=222.95 Aligned_cols=254 Identities=21% Similarity=0.319 Sum_probs=183.4
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeee-eeeecCeE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYG-FCLHKKCM 524 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~ 524 (740)
..+.|.+.+.+|+|.||.+-+++++ +.+.+|+|.+..+... .++|.+|...--.+ .|.||+.-|+ .|...+.+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh----HHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 3568999999999999999999765 4678999999876654 46788887766566 5889998776 45677889
Q ss_pred EEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc--CCCcEEEeecccc
Q 004642 525 FLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD--SNLEASVADFGTA 602 (740)
Q Consensus 525 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--~~~~~kl~DfG~a 602 (740)
++++||++.|+|.+-+... .+-+....+++.|+++|+.|||++ .+||||||.+|||+- +...+|++|||..
T Consensus 98 vF~qE~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EEeeccCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccc
Confidence 9999999999998777654 366778889999999999999999 999999999999994 3457999999998
Q ss_pred eecccCCCcccccccCCCcccccccccc-----ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcc
Q 004642 603 RLLHVDSSYRTLRAGTYGYIAPELAYTI-----VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQ 677 (740)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+....... ..--+..|.|||..... ...+.+|||.||+++|..+||+.||..... . ....+-...-.+
T Consensus 171 ~k~g~tV~---~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~--~--d~~Y~~~~~w~~ 243 (378)
T KOG1345|consen 171 RKVGTTVK---YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI--M--DKPYWEWEQWLK 243 (378)
T ss_pred cccCceeh---hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc--c--CchHHHHHHHhc
Confidence 75432211 12235578999976532 355678999999999999999999873211 1 111111111112
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHHH
Q 004642 678 RLSPPVNQKIVQDIILVSTIAFACLSSQPKSR---PTMQRISQEL 719 (740)
Q Consensus 678 ~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ev~~~L 719 (740)
+..+..+.....-...+.++.++-+.++|++| -+++...+.+
T Consensus 244 rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 244 RKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred ccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 22222222122223346788889999999999 4444444444
No 406
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=3.4e-27 Score=237.98 Aligned_cols=268 Identities=25% Similarity=0.350 Sum_probs=199.2
Q ss_pred HHHHHHHhcccccceeeecccceEEEEEEeC----CCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeee
Q 004642 442 YEDLINATEDFHIKYCIGTGGYGSVYKAELP----EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYG 516 (740)
Q Consensus 442 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 516 (740)
+++.....+.|..+++||+|.|++||++... ..+.||+|.+...... .++..|++++..+ .+.||+++.+
T Consensus 28 ~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-----~ri~~El~~L~~~gG~~ni~~~~~ 102 (418)
T KOG1167|consen 28 RQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-----SRILNELEMLYRLGGSDNIIKLNG 102 (418)
T ss_pred HhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-----hHHHHHHHHHHHhccchhhhcchh
Confidence 3445566788999999999999999999443 4678999999876654 5688999999999 5899999999
Q ss_pred eeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc-CCCcEE
Q 004642 517 FCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLD-SNLEAS 595 (740)
Q Consensus 517 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~-~~~~~k 595 (740)
++..++...+|+||+++....++... ++..++..+++.+..||+++|.. |||||||||+|++++ ..+.-.
T Consensus 103 ~~rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 103 CFRNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred hhccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCce
Confidence 99999999999999999888777754 56788889999999999999999 999999999999998 456789
Q ss_pred EeecccceecccCC----------------------------------C----------cccccccCCCcccccccccc-
Q 004642 596 VADFGTARLLHVDS----------------------------------S----------YRTLRAGTYGYIAPELAYTI- 630 (740)
Q Consensus 596 l~DfG~a~~~~~~~----------------------------------~----------~~~~~~gt~~y~aPE~~~~~- 630 (740)
|.|||+|....... . ....+.||++|.|||++...
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 99999997221000 0 00113599999999998765
Q ss_pred ccCCcchhHhHHHHHHHHHhCCCCCCcccc----------------------cccC------CCCCch---------h-h
Q 004642 631 VVTGKCDVYSFGVVALEVLMGTHPGGLLSS----------------------LSSS------SGPKIM---------L-I 672 (740)
Q Consensus 631 ~~~~~~DvwslGvil~elltg~~p~~~~~~----------------------~~~~------~~~~~~---------~-~ 672 (740)
..++++||||.|||+.-+++++.||-.... +... ...... + .
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~ 333 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHI 333 (418)
T ss_pred CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccCh
Confidence 467899999999999999999999743211 0000 000000 0 0
Q ss_pred hhhcccCCC-cchhhhHHHH-HHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 673 DVLNQRLSP-PVNQKIVQDI-ILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 673 ~~~~~~l~~-~~~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
+.+.+.-.+ .......+.. ..+.+++.+|++.+|.+|.|++|.++|.....
T Consensus 334 ~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 334 ESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred hhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 111110000 0001111111 14789999999999999999999999987663
No 407
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=6.5e-26 Score=268.07 Aligned_cols=199 Identities=17% Similarity=0.240 Sum_probs=142.4
Q ss_pred ccCC-Cccceeeeeee-------ecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 004642 505 TVRH-RNIVKLYGFCL-------HKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSI 576 (740)
Q Consensus 505 ~l~h-~niv~l~~~~~-------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 576 (740)
.++| +||+++++++. +.+..+.++||+ +++|.+++.... ..+++.++..++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3445 57888888772 334577888987 559999997543 3589999999999999999999998 99
Q ss_pred EecCCCCCceEEcC-------------------CCcEEEeecccceecccCC----------------CcccccccCCCc
Q 004642 577 IHRDISSNNILLDS-------------------NLEASVADFGTARLLHVDS----------------SYRTLRAGTYGY 621 (740)
Q Consensus 577 vH~dlkp~NIll~~-------------------~~~~kl~DfG~a~~~~~~~----------------~~~~~~~gt~~y 621 (740)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4456666677665421100 000113578899
Q ss_pred cccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHc
Q 004642 622 IAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFAC 701 (740)
Q Consensus 622 ~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~c 701 (740)
||||++.+..++.++|||||||++|||++|..|+..... ..........++.. ........+++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---------TMSSLRHRVLPPQI----LLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---------HHHHHHHhhcChhh----hhcCHHHHHHHHHh
Confidence 999999999999999999999999999999888543111 11111111111111 11122356788899
Q ss_pred ccCCCCCCCCHHHHHHHHHcC
Q 004642 702 LSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 702 l~~dP~~RPs~~ev~~~L~~~ 722 (740)
|+.+|.+||++.|++++....
T Consensus 249 L~~~P~~Rps~~eil~h~~~~ 269 (793)
T PLN00181 249 LHPEPSCRPSMSELLQSEFIN 269 (793)
T ss_pred CCCChhhCcChHHHhhchhhh
Confidence 999999999999999887654
No 408
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.92 E-value=9.3e-27 Score=242.67 Aligned_cols=287 Identities=28% Similarity=0.379 Sum_probs=184.2
Q ss_pred CCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccc
Q 004642 76 GRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLF 155 (740)
Q Consensus 76 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 155 (740)
.++.++.+.+|++...--+..+-.+..|+.||||+|++. ..|..+..-+++-.|+||+|+|..+....|-+|+.|-.||
T Consensus 78 p~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 78 PRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhc
Confidence 345555666666654433335667778888888888887 5677777777888888888888755445566788888888
Q ss_pred cccccccCCChhhhccccccceeecccccccccCCCcccccccCCC------ccccCCCCccccccCCCCEEecCCCcCC
Q 004642 156 LYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISS------NQFHSSIPLEIGNFSALDTLDLSDNKIH 229 (740)
Q Consensus 156 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~------n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 229 (740)
||+|++. .+|+.+..|..|++|.|++|.+.-..-..+..++.|+- +.-...+|.++..+.+|..+|||.|.+.
T Consensus 157 LS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp 235 (1255)
T KOG0444|consen 157 LSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP 235 (1255)
T ss_pred cccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC
Confidence 8888887 56677788888888888888765332222222222221 1222356777777777777777777777
Q ss_pred CcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCC-CCchhc
Q 004642 230 GIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDG-TIPLEM 308 (740)
Q Consensus 230 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~p~~~ 308 (740)
.+|+.+.++.+|+.|+||+|+|+ .+....+...+|++|+||.|+++ ..|.++..+++|+.|++.+|+++- -+|..+
T Consensus 236 -~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGI 312 (1255)
T KOG0444|consen 236 -IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGI 312 (1255)
T ss_pred -cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccch
Confidence 67777777777777777777776 33344455567777777777776 667777777777777777776652 356666
Q ss_pred ccccccceEEecCCcccCCCCCCCccc----cccCCCCCCCCCcCcc---ccCCCCCcccCCccCCCC
Q 004642 309 GKILLLQNLDLSHNNLSGTIPKTLRPM----YVDLSFNNLEGEIPTY---LRGNPPKSFVGNKGLSGN 369 (740)
Q Consensus 309 ~~l~~L~~L~l~~N~l~~~~p~~~~~~----~l~ls~N~l~~~~p~~---~~~~~~~~~~~n~~~~~~ 369 (740)
+++.+|+.+..++|.|. ..|+.+... .+.|+.|+|. .+|+. +.++....+..|+.+-.+
T Consensus 313 GKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMP 378 (1255)
T KOG0444|consen 313 GKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMP 378 (1255)
T ss_pred hhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCC
Confidence 66666666666666665 555555332 3666666665 23432 233333444455544433
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=1.3e-24 Score=209.09 Aligned_cols=165 Identities=23% Similarity=0.181 Sum_probs=125.6
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCccc
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRT 613 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 613 (740)
|+|.++++..+. .+++.++..++.||+.||+|||++ + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 688888875432 589999999999999999999988 5 999999999999999 99998764322
Q ss_pred ccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCC--c--chhhhHH
Q 004642 614 LRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSP--P--VNQKIVQ 689 (740)
Q Consensus 614 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~--~--~~~~~~~ 689 (740)
..||+.|+|||++.+..++.++|||||||++|||+||+.||...... .............. . .......
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL------SAILEILLNGMPADDPRDRSNLESVS 136 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh------cHHHHHHHHHhccCCccccccHHHHH
Confidence 26889999999999999999999999999999999999998643211 11111221111111 0 0000111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
....+.+++.+||+.+|++||++.|+++++...
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 112488999999999999999999999999765
No 410
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.90 E-value=8.5e-26 Score=235.56 Aligned_cols=244 Identities=27% Similarity=0.395 Sum_probs=142.6
Q ss_pred CEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccc
Q 004642 77 RITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFL 156 (740)
Q Consensus 77 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (740)
-|..+|+++|.+.|.--+.....+++++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-..++.|+.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 45666777777775544445666667777777776665 56677777777777777777665 33455666667777777
Q ss_pred ccccccC-CChhhhccccccceeecccccccccCCCccccc-----ccCCCccccCCCCccccccCCCCEEecCCCcCCC
Q 004642 157 YSNKLSG-VLPQEIGNLKSLTELYVTNNALGGLIPSTLFRL-----TNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHG 230 (740)
Q Consensus 157 ~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 230 (740)
..|++.. -+|+.+..|..|+.||||+|++. ..|..+... .+|+.|+|..+....+.+++.|-.||||+|++.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe- 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE- 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-
Confidence 7776652 24556666667777777777765 334444332 246666666555555666667777777777776
Q ss_pred cCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCccc-CcCCcccccCCCCCeEeccCCCCCCCCchhcc
Q 004642 231 IIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLS-GSIPTEIGNCSALKNLTLNHNSLDGTIPLEMG 309 (740)
Q Consensus 231 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 309 (740)
.+|..+..+.+|++|.|++|.+...--..+..+++|+.|.+++.+=+ ..+|.++.++.+|..+|||.|.+. .+|..+-
T Consensus 164 ~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly 242 (1255)
T KOG0444|consen 164 MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLY 242 (1255)
T ss_pred hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHh
Confidence 45556666667777777776654332333334444444444444322 234444445555555555555554 4445444
Q ss_pred cccccceEEecCCccc
Q 004642 310 KILLLQNLDLSHNNLS 325 (740)
Q Consensus 310 ~l~~L~~L~l~~N~l~ 325 (740)
++++|+.|+||+|+|+
T Consensus 243 ~l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 243 KLRNLRRLNLSGNKIT 258 (1255)
T ss_pred hhhhhheeccCcCcee
Confidence 5555555555555444
No 411
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4e-24 Score=202.48 Aligned_cols=250 Identities=21% Similarity=0.366 Sum_probs=186.9
Q ss_pred ccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEecc
Q 004642 453 HIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
....+|.+...|+.|+|+|+ |..+++|++....... ...+.|.+|.-.++-..||||.+++|.|..+....++..||+
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhccCCCccccccccc-Ccchhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 33456889999999999995 5667778877654432 234688999999999999999999999999999999999999
Q ss_pred CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcc
Q 004642 533 RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYR 612 (740)
Q Consensus 533 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 612 (740)
.|+|+..+|+... ..++-.++.+++.+||+|++|||+-. +-|.---+.+..+++|++.+++|+ .+.+++... .
T Consensus 271 ~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad~kfsfq----e 343 (448)
T KOG0195|consen 271 FGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQ----E 343 (448)
T ss_pred chHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-cccceeeee----c
Confidence 9999999998654 35788899999999999999999862 223344689999999999988874 222222111 1
Q ss_pred cccccCCCccccccccccccC---CcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHH
Q 004642 613 TLRAGTYGYIAPELAYTIVVT---GKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQ 689 (740)
Q Consensus 613 ~~~~gt~~y~aPE~~~~~~~~---~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 689 (740)
..+.-.+.||+||.+...+-+ ..+|+|||++++||+.|...||......+- +. +...+-+...+++. ...
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec--gm-kialeglrv~ippg----is~ 416 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC--GM-KIALEGLRVHIPPG----ISR 416 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh--hh-hhhhccccccCCCC----ccH
Confidence 112346789999998866533 468999999999999999999986543211 11 11122333333332 233
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 690 DIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 690 ~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
. +.+++.-|+..||.+||.+..++-.|++
T Consensus 417 h---m~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 417 H---MNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred H---HHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 3 5678888999999999999999877764
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=9.4e-23 Score=213.95 Aligned_cols=168 Identities=18% Similarity=0.154 Sum_probs=129.8
Q ss_pred HHhcccccceeeecccceEEEEEEeC--CCcEEEEEEccCCcc--cchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELP--EGKVVALKKLHHSET--EDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
...++|.+.+.||+|+||+||+|... +++.||||++..... ......+.+.+|++++++++|+|+++.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 34678999999999999999999654 577889998753321 122335678999999999999999853322 24
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceEEcCCCcEEEeeccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDI-SSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl-kp~NIll~~~~~~kl~DfG~ 601 (740)
..++||||++|++|... ... . ...++.|+++||+|||+. ||+|||| ||+|||++.++.+||+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~~------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RPH------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHHh-Ccc------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 57999999999999632 111 1 135788999999999998 9999999 99999999999999999999
Q ss_pred ceecccCCCcc--------cccccCCCcccccccccc
Q 004642 602 ARLLHVDSSYR--------TLRAGTYGYIAPELAYTI 630 (740)
Q Consensus 602 a~~~~~~~~~~--------~~~~gt~~y~aPE~~~~~ 630 (740)
|+.+....... +...+++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99775432111 234578889999988643
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.9e-22 Score=188.28 Aligned_cols=257 Identities=18% Similarity=0.233 Sum_probs=194.2
Q ss_pred HhcccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCC-CccceeeeeeeecCeEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRH-RNIVKLYGFCLHKKCMF 525 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~ 525 (740)
....|.++++||.|+||.+|.| ...+|..||+|.-...... .++..|.++...+++ ..|..+..+..+...-.
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-----cchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 3568999999999999999999 6678999999988765544 456789999999975 67888888888999999
Q ss_pred EEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC---CcEEEeecccc
Q 004642 526 LIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN---LEASVADFGTA 602 (740)
Q Consensus 526 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~DfG~a 602 (740)
+|||.. |-+|+++..-... .++.++++-.+-|++.-++|+|.+ +++||||||+|+|+.-+ ..+.++|||+|
T Consensus 88 lVMdLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeeecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccch
Confidence 999987 6689888765443 578899999999999999999999 99999999999999743 45889999999
Q ss_pred eecccCCC-------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhh
Q 004642 603 RLLHVDSS-------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVL 675 (740)
Q Consensus 603 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 675 (740)
+.+..... ......||.+|.+-....+...+.+.|+-|+|.++.++-.|..||....... .......+.
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t----k~QKyEkI~ 237 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT----KKQKYEKIS 237 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh----HHHHHHHHH
Confidence 87753221 1223469999999888888888889999999999999999999998654311 112222333
Q ss_pred cccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 676 NQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 676 ~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
.+....+..........++.-.+..|-..--++-|...-+.+.+
T Consensus 238 EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF 281 (341)
T KOG1163|consen 238 EKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF 281 (341)
T ss_pred HhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence 33333332222222223366667778777777778765544443
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=8.8e-22 Score=207.81 Aligned_cols=257 Identities=21% Similarity=0.220 Sum_probs=189.8
Q ss_pred ccccceeeecccceEEEEEEeCCC--cEEEEEEccCCcccchHHHHHHHHHHHHHhccCC----Cccceeeeee-eecCe
Q 004642 451 DFHIKYCIGTGGYGSVYKAELPEG--KVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRH----RNIVKLYGFC-LHKKC 523 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~ 523 (740)
+|.+.+.||+|+||.||.+..... ..+|+|.......... ..+..|..++..+.. +++..+++.. ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 799999999999999999965543 5788888766433321 156678888888862 6888999888 57888
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-----CcEEEee
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN-----LEASVAD 598 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-----~~~kl~D 598 (740)
.++||+.+ |.+|.++..... ...++..++..|+.|++.+|+++|+. |++||||||.|+++... ..+.|.|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 99999977 679999886555 44789999999999999999999999 99999999999999865 4689999
Q ss_pred cccce--ecccCCC-----c---ccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCC
Q 004642 599 FGTAR--LLHVDSS-----Y---RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPK 668 (740)
Q Consensus 599 fG~a~--~~~~~~~-----~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~ 668 (740)
||+++ .+..... . .....||..|++++...+...+.+.|+||++.++.|++.|..||........ .
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~----~ 246 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL----K 246 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch----H
Confidence 99998 3322211 1 1234599999999999999999999999999999999999999854332111 1
Q ss_pred chhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 669 IMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 669 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
................. .....+.++...+-..+..++|....+.+.+...
T Consensus 247 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 247 SKFEKDPRKLLTDRFGD---LKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HHHHHHhhhhccccccC---CChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 11111111111110000 1112255666666678999999999998887544
No 415
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.87 E-value=9.3e-25 Score=217.57 Aligned_cols=245 Identities=30% Similarity=0.454 Sum_probs=197.4
Q ss_pred EEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccc
Q 004642 78 ITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLY 157 (740)
Q Consensus 78 v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 157 (740)
...+.+++|++....+ .+.++..|++|++.+|++. ..|++++.+..++.|+.++|+++ .+|+.++.+.+|..|+++
T Consensus 47 l~~lils~N~l~~l~~--dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 47 LQKLILSHNDLEVLRE--DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred hhhhhhccCchhhccH--hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4567778887765444 5788899999999999998 77889999999999999999998 778889999999999999
Q ss_pred cccccCCChhhhccccccceeecccccccccCCCcccccc-----cCCCccccCCCCccccccCCCCEEecCCCcCCCcC
Q 004642 158 SNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLT-----NISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGII 232 (740)
Q Consensus 158 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 232 (740)
.|.+. ..|+.++.+..|+.|+..+|+++.. |..++.+. .+.+|++....|..+. ++.|++||...|-++ .+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~sl-p~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQISSL-PEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccccC-chHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 99998 6778889999999999999999855 44333332 3567887766666555 888888888888887 67
Q ss_pred CccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccc-cCCCCCeEeccCCCCCCCCchhcccc
Q 004642 233 PDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIG-NCSALKNLTLNHNSLDGTIPLEMGKI 311 (740)
Q Consensus 233 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l 311 (740)
|..++.+.+|..|||.+|+|. ..| .|.++..|.+|+++.|+|. .+|.... ++++|..|||.+|+++ ..|+.++.+
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 788888888888888888887 556 7888888888888888887 5665554 8888888888888888 888888888
Q ss_pred cccceEEecCCcccCCCCCCCccc
Q 004642 312 LLLQNLDLSHNNLSGTIPKTLRPM 335 (740)
Q Consensus 312 ~~L~~L~l~~N~l~~~~p~~~~~~ 335 (740)
.+|+.||+|+|.++ .+|.+++.+
T Consensus 275 rsL~rLDlSNN~is-~Lp~sLgnl 297 (565)
T KOG0472|consen 275 RSLERLDLSNNDIS-SLPYSLGNL 297 (565)
T ss_pred hhhhhhcccCCccc-cCCcccccc
Confidence 88888888888888 456555544
No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=8.4e-21 Score=201.75 Aligned_cols=258 Identities=31% Similarity=0.443 Sum_probs=199.0
Q ss_pred cccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCC-ccceeeeeeeecCeEEEEEEe
Q 004642 452 FHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHR-NIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 530 (740)
|.+.+.||.|+||.||++... ..+++|.+.............+.+|..++..+.|+ +++++.+.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667888999999999999765 78999999877665543467899999999999988 799999999878778999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-cEEEeecccceecccCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-EASVADFGTARLLHVDS 609 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~DfG~a~~~~~~~ 609 (740)
+.++++.+++........+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999996665443112578889999999999999999999 999999999999999988 79999999998654433
Q ss_pred C------cccccccCCCccccccccc---cccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCC
Q 004642 610 S------YRTLRAGTYGYIAPELAYT---IVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLS 680 (740)
Q Consensus 610 ~------~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 680 (740)
. ......|+..|+|||...+ ..+....|+||+|++++++++|..||...... .......+.+.....
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~ 232 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELPT 232 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcCC
Confidence 2 2355689999999999987 57888999999999999999999996543210 001111111111111
Q ss_pred C----cchhhh-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 681 P----PVNQKI-VQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 681 ~----~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
+ ...... ......+.+++.+|+..+|..|.++.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 233 PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1 000000 1112347789999999999999999887775
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=1.7e-22 Score=224.24 Aligned_cols=253 Identities=22% Similarity=0.232 Sum_probs=187.8
Q ss_pred ccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccch-HHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 451 DFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDS-AFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
++..++.+|.+.|=+|.+++.++|. |+||++.+....-. ...++-.+|++ ...++|||.+++.-.-......|||.+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5677888999999999999998887 88999876553321 11222233444 556699999999888888888899999
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee--ccc
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL--LHV 607 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~--~~~ 607 (740)
|..+ +|+|.+.... -+...+...|+.|++.|+..+|.. ||+|||||.+|||++.-..+.|+||..-+- +..
T Consensus 102 yvkh-nLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9976 8998887643 466677788999999999999999 999999999999999999999999987542 222
Q ss_pred CCC-cccc----cccCCCcccccccccc----------c-cCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCch
Q 004642 608 DSS-YRTL----RAGTYGYIAPELAYTI----------V-VTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIM 670 (740)
Q Consensus 608 ~~~-~~~~----~~gt~~y~aPE~~~~~----------~-~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 670 (740)
|+. ..+. ...-.+|.|||.+... . .+++.||||+||+++|+++ |++||....-+....+....
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 221 1111 1223579999987541 1 5678899999999999998 78888865544444443333
Q ss_pred hhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 671 LIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 671 ~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
....+.+.... .+++++..|++.||++|-++++.++.-....
T Consensus 255 ~e~~Le~Ied~-----------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 255 PEQLLEKIEDV-----------SLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred HHHHHHhCcCc-----------cHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 33333222111 1788999999999999999999998855443
No 418
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=2.2e-22 Score=225.16 Aligned_cols=258 Identities=21% Similarity=0.284 Sum_probs=186.9
Q ss_pred cceeeecccceEEEEEE-eCCCcEEEEEEccC---CcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEE
Q 004642 454 IKYCIGTGGYGSVYKAE-LPEGKVVALKKLHH---SETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYE 529 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~~~~---~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (740)
..+.+|.|++|.|+.+. ....+.++.|.+.. ...........+..|+.+-..++|+|++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 45679999999888773 33444444444331 222222233346778888888999999988888877766666699
Q ss_pred eccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCC
Q 004642 530 YMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 530 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
|+++ +|+..+.... .+...++..+++|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+.....+-
T Consensus 402 ~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 9999887653 467788899999999999999999 99999999999999999999999999998765432
Q ss_pred C----cccccccCCCccccccccccccCCc-chhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcc-cCCCcc
Q 004642 610 S----YRTLRAGTYGYIAPELAYTIVVTGK-CDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQ-RLSPPV 683 (740)
Q Consensus 610 ~----~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 683 (740)
. .....+|+..|+|||++.+..|.+. .||||.|+++..|.+|+.||............ ....++ ......
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~----~~~~~~~~~~~~~ 550 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT----NNYSDQRNIFEGP 550 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh----hccccccccccCh
Confidence 2 2344579999999999999998875 79999999999999999998754321110000 000000 000111
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcC
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAG 722 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~ 722 (740)
..-.......-..++.+++++||.+|-|++++++.=+..
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~ 589 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIR 589 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence 111112222366799999999999999999998765544
No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86 E-value=2.1e-21 Score=189.16 Aligned_cols=189 Identities=15% Similarity=0.187 Sum_probs=144.2
Q ss_pred eecCCCcccHHHHHH--HhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHH------HHHHHHHHh
Q 004642 433 VWNYDGKILYEDLIN--ATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKS------FQNEAHVLS 504 (740)
Q Consensus 433 ~~~~~~~~~~~~l~~--~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~------~~~E~~~l~ 504 (740)
++..+....|.++.. ..++|.+.+.+|.|+||.||.++. +++.+|+|.+.......+..... +.+|++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~ 90 (232)
T PRK10359 12 VFYKDNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTD 90 (232)
T ss_pred EEecCCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHH
Confidence 333444444555543 478999999999999999999866 57789999998766655554444 579999999
Q ss_pred ccCCCccceeeeeeeec--------CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 004642 505 TVRHRNIVKLYGFCLHK--------KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSI 576 (740)
Q Consensus 505 ~l~h~niv~l~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 576 (740)
+++|++|..+.+++... +..+++|||++|.+|.++.. ++. ....+++.++..+|+. |+
T Consensus 91 rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi 156 (232)
T PRK10359 91 RVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GM 156 (232)
T ss_pred HHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CC
Confidence 99999999999886643 35899999999999977631 222 2456999999999999 99
Q ss_pred EecCCCCCceEEcCCCcEEEeecccceecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHH
Q 004642 577 IHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVL 649 (740)
Q Consensus 577 vH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 649 (740)
+|||++|+||+++.++ ++|+|||..+....+.... .+.....+..++|+|+||+++..+.
T Consensus 157 ~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 157 VSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH------------HHHHHhHhcccccccceeEeehHHH
Confidence 9999999999999988 9999999887553221111 1333445667899999999876654
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=1.6e-20 Score=183.44 Aligned_cols=199 Identities=20% Similarity=0.279 Sum_probs=168.7
Q ss_pred cccccceeeecccceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 527 (740)
-.|.+.++||+|.||+++.| .+-+++.||||.-...... -++..|.+.++.+ ..+.|...|-+-.++.+-.+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A-----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA-----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCCc-----chHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 36889999999999999999 5568999999977654432 4667788888888 568999999888889899999
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-----cEEEeecccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNL-----EASVADFGTA 602 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~-----~~kl~DfG~a 602 (740)
+|.+ |-+|+|+..-.+. .++.+++.-+|.|++.-++|+|++ .+|.|||||+|+|+...+ .+.|+|||+|
T Consensus 103 idLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9987 6689888876654 588999999999999999999999 999999999999997433 5899999999
Q ss_pred eecccCCCc-------ccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCccc
Q 004642 603 RLLHVDSSY-------RTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLS 659 (740)
Q Consensus 603 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 659 (740)
+.+...... .....||.+||+-....+.+-+.+.|+-|+|=++++++.|..||....
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 988644321 123469999999999999999999999999999999999999998654
No 421
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.85 E-value=2.2e-22 Score=200.60 Aligned_cols=293 Identities=25% Similarity=0.297 Sum_probs=211.2
Q ss_pred CCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeeccc-ccccccCchhhccccccccc
Q 004642 76 GRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHG-NNLTGIIPKEIGSLRNLRGL 154 (740)
Q Consensus 76 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L 154 (740)
...++|+|..|.|+ .+|+.+|+.+++|+.||||+|+|+.+-|++|..+.+|.+|-+-+ |+|+.+..+.|++|..|+-|
T Consensus 67 ~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 67 PETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred CcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHH
Confidence 47889999998886 67777999999999999999999999999999999998886655 89998888899999999999
Q ss_pred ccccccccCCChhhhccccccceeecccccccccCCCcccccccC-----CCccc------------cCCCCccccccCC
Q 004642 155 FLYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNI-----SSNQF------------HSSIPLEIGNFSA 217 (740)
Q Consensus 155 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l-----~~n~l------------~~~~p~~l~~l~~ 217 (740)
.+.-|++.-+..+.|..|++|..|.+.+|.+..+.-.+|..+..+ +.|.+ .-..|..++....
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 999999998889999999999999999999875544455544321 12220 0011111221111
Q ss_pred ----------------------CCEE---ecCCCcCCCcCC-ccccccCCCCeecccCCccCCCchhhhcCccCCceecc
Q 004642 218 ----------------------LDTL---DLSDNKIHGIIP-DELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDL 271 (740)
Q Consensus 218 ----------------------L~~L---~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 271 (740)
++.+ ..+.....++-| ..|.+|++|+.|+|++|+|+++-+.+|.++..++.|.|
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 1111 112222333333 45788899999999999999888889999999999999
Q ss_pred CCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccceEEecCCcccCCCCCCCcccccc---CCCCCCCCCc
Q 004642 272 SKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLSGTIPKTLRPMYVD---LSFNNLEGEI 348 (740)
Q Consensus 272 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~---ls~N~l~~~~ 348 (740)
..|+|...-...|.++..|+.|+|.+|+|+...|..|..+.+|.+|+|-.|++.+.---.+-..++. ..+|. -+.-
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~-~Cq~ 384 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNP-RCQS 384 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCC-CCCC
Confidence 9999987777778889999999999999998888889999999999999999875322111011111 11111 1233
Q ss_pred CccccCCCCCcccCCccCCCCC
Q 004642 349 PTYLRGNPPKSFVGNKGLSGNV 370 (740)
Q Consensus 349 p~~~~~~~~~~~~~n~~~~~~~ 370 (740)
|..+++++......-..-|+.+
T Consensus 385 p~~~~~~~~~dv~~~~~~c~~~ 406 (498)
T KOG4237|consen 385 PGFVRQIPISDVAFGDFRCGGP 406 (498)
T ss_pred CchhccccchhccccccccCCc
Confidence 4556666666555555556543
No 422
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.83 E-value=3.9e-23 Score=206.08 Aligned_cols=238 Identities=32% Similarity=0.470 Sum_probs=209.1
Q ss_pred CCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccc
Q 004642 76 GRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLF 155 (740)
Q Consensus 76 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 155 (740)
.-.+.+++.+|++...++ ++..+..++.|+.++|+++ .+|++++.+..|..|+.++|.+. .+|+.++.+..|+.|+
T Consensus 68 ~~l~vl~~~~n~l~~lp~--aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~ 143 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLSQLPA--AIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLD 143 (565)
T ss_pred cceeEEEeccchhhhCCH--HHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhh
Confidence 457889999998875554 5788889999999999998 88999999999999999999998 6677899999999999
Q ss_pred cccccccCCChhhhccccccceeecccccccccCCCcccccccC-----CCccccCCCCccccccCCCCEEecCCCcCCC
Q 004642 156 LYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNI-----SSNQFHSSIPLEIGNFSALDTLDLSDNKIHG 230 (740)
Q Consensus 156 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l-----~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 230 (740)
..+|+++ ..|+.+.++.+|..|++.+|++....|.... ++.| .+|. -+.+|+.++.+.+|+-|+|..|+|.
T Consensus 144 ~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~-L~tlP~~lg~l~~L~~LyL~~Nki~- 219 (565)
T KOG0472|consen 144 ATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNL-LETLPPELGGLESLELLYLRRNKIR- 219 (565)
T ss_pred ccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhh-hhcCChhhcchhhhHHHHhhhcccc-
Confidence 9999998 6788899999999999999999977665443 4432 3344 4688999999999999999999999
Q ss_pred cCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhccc
Q 004642 231 IIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGK 310 (740)
Q Consensus 231 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 310 (740)
.+| .|.+++.|+.|+++.|+|.-...+...++++|..|||.+|+++ ..|+.+.-+.+|.+||+++|.|+ ..|.++++
T Consensus 220 ~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgn 296 (565)
T KOG0472|consen 220 FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGN 296 (565)
T ss_pred cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCccccc
Confidence 567 7999999999999999998444444458999999999999999 78999999999999999999999 78889999
Q ss_pred ccccceEEecCCccc
Q 004642 311 ILLLQNLDLSHNNLS 325 (740)
Q Consensus 311 l~~L~~L~l~~N~l~ 325 (740)
+ .|+.|-+.||++.
T Consensus 297 l-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 297 L-HLKFLALEGNPLR 310 (565)
T ss_pred c-eeeehhhcCCchH
Confidence 9 9999999999997
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.5e-20 Score=181.64 Aligned_cols=142 Identities=20% Similarity=0.197 Sum_probs=109.1
Q ss_pred ceeeecccceEEEEEEeCCCcEEEEEEccCCcccchH-----------------------HHHHHHHHHHHHhccCCCcc
Q 004642 455 KYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSA-----------------------FVKSFQNEAHVLSTVRHRNI 511 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~h~ni 511 (740)
...||+|+||.||+|..++|+.||||+++........ .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4579999999999998778999999999764321110 01233459999999988776
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCceEEcC
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYL-HHDCTLSIIHRDISSNNILLDS 590 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~ivH~dlkp~NIll~~ 590 (740)
.....+... ..++||||++++++....... ..+++.+...++.|++.+|+|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 544333222 248999999998765443222 2578899999999999999999 677 999999999999998
Q ss_pred CCcEEEeecccceec
Q 004642 591 NLEASVADFGTARLL 605 (740)
Q Consensus 591 ~~~~kl~DfG~a~~~ 605 (740)
++.++|+|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 478999999999754
No 424
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=9e-20 Score=183.06 Aligned_cols=236 Identities=19% Similarity=0.245 Sum_probs=151.5
Q ss_pred ccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCC----------Cccceeeeeee
Q 004642 451 DFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRH----------RNIVKLYGFCL 519 (740)
Q Consensus 451 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 519 (740)
.+...+.||.|+++.||.+... +|+.+|||++...........+++.+|.-....+.+ -.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4455678999999999999654 589999999877665444456788877766655432 12222222221
Q ss_pred e---------c---C-----eEEEEEEeccCCCchhhhcC---C-CccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 004642 520 H---------K---K-----CMFLIYEYMERGSLFCVLHD---D-DEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIH 578 (740)
Q Consensus 520 ~---------~---~-----~~~lv~e~~~~g~L~~~l~~---~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 578 (740)
- . . ..+++|+-+. ++|.+++.. . .....+....++.+..|+++.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 1 1 1 2366777764 477766532 1 1123455667778889999999999999 9999
Q ss_pred cCCCCCceEEcCCCcEEEeecccceecccCCCcccccccCCCccccccccc--------cccCCcchhHhHHHHHHHHHh
Q 004642 579 RDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYT--------IVVTGKCDVYSFGVVALEVLM 650 (740)
Q Consensus 579 ~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslGvil~ellt 650 (740)
+||+|+|++++.+|.+.|+||+....... .... ...+..|.+||.... ..++.+.|.|++|+++|.|++
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~--~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT--RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE--EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc--eeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999998876432 1111 345678999997643 247788999999999999999
Q ss_pred CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCC
Q 004642 651 GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 709 (740)
Q Consensus 651 g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 709 (740)
|+.||+.......... . .+ ... .-...+..+|..+++++|++|
T Consensus 246 ~~lPf~~~~~~~~~~~---~-f~----~C~--------~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW---D-FS----RCR--------DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG---G-GT----TSS-----------HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc---c-ch----hcC--------CcCHHHHHHHHHHccCCcccC
Confidence 9999986543211110 0 00 011 111227889999999999988
No 425
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=2e-19 Score=174.69 Aligned_cols=142 Identities=22% Similarity=0.266 Sum_probs=111.8
Q ss_pred ceeeecccceEEEEEEeCCCcEEEEEEccCCcccc-----------------------hHHHHHHHHHHHHHhccCCCcc
Q 004642 455 KYCIGTGGYGSVYKAELPEGKVVALKKLHHSETED-----------------------SAFVKSFQNEAHVLSTVRHRNI 511 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~l~h~ni 511 (740)
...||+|++|.||+|...+|+.||||+++...... ......+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999987789999999998653210 0012234678999999999987
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchhh-hcCCCccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEc
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFCV-LHDDDEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLD 589 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~ 589 (740)
.....+.... .++||||++++++... +.. ..++..+...++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 5554443332 4899999998855433 322 246778899999999999999999 8 999999999999999
Q ss_pred CCCcEEEeecccceecc
Q 004642 590 SNLEASVADFGTARLLH 606 (740)
Q Consensus 590 ~~~~~kl~DfG~a~~~~ 606 (740)
++.++|+|||+++...
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 7899999999998764
No 426
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=3.9e-19 Score=169.19 Aligned_cols=186 Identities=12% Similarity=0.064 Sum_probs=139.7
Q ss_pred ccceeeecccceEEEEEEeCCCcEEEEEEccCCcccch-HHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEe
Q 004642 453 HIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDS-AFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
.+...|+.|+||+||.+.. .+.+++.+.+........ -....+.+|++++++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998866 677788777765443211 11235789999999995 5789999886 346999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceEEcCCCcEEEeecccceecccCC
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDI-SSNNILLDSNLEASVADFGTARLLHVDS 609 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl-kp~NIll~~~~~~kl~DfG~a~~~~~~~ 609 (740)
++|.+|...... ....++.|++.+++++|++ ||+|||| ||+|||++.++.++|+|||+|.......
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999988644321 1134678999999999999 9999999 7999999999999999999998654333
Q ss_pred Cc-------------ccccccCCCccccccccc--cccCCcchhHhHHHHHHHHHhCCCCCC
Q 004642 610 SY-------------RTLRAGTYGYIAPELAYT--IVVTGKCDVYSFGVVALEVLMGTHPGG 656 (740)
Q Consensus 610 ~~-------------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~ 656 (740)
.. ......++.|++|+...- ..--...+.++-|+-+|.++||..++.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 21 111235778888875432 222246789999999999999998853
No 427
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.80 E-value=7.3e-21 Score=189.84 Aligned_cols=246 Identities=25% Similarity=0.322 Sum_probs=197.5
Q ss_pred CCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccccc-ccccCCChhhhccccccceee
Q 004642 101 PNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYS-NKLSGVLPQEIGNLKSLTELY 179 (740)
Q Consensus 101 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 179 (740)
+....++|..|+|+.+.|.+|+.+.+|++||||+|+|+.+-|++|.++++|..|-+.+ |+|+.+..+.|++|.+|+-|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4578899999999999999999999999999999999999999999999999987766 999988889999999999999
Q ss_pred cccccccccCCCcccccccC-----CCccccCCCCccccccCCCCEEecCCCcCC------------CcCCccccccCCC
Q 004642 180 VTNNALGGLIPSTLFRLTNI-----SSNQFHSSIPLEIGNFSALDTLDLSDNKIH------------GIIPDELTKLSQL 242 (740)
Q Consensus 180 L~~N~l~~~~~~~~~~l~~l-----~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~------------~~~~~~~~~l~~L 242 (740)
+.-|++.-....+|..+.++ .+|.+...-...|..+.+++.+++..|.+- ...|-.++...-.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 99999998888888877665 678877666668889999999999988832 1222222222111
Q ss_pred ----------------------Cee--ccc-CCccCCCc-hhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEecc
Q 004642 243 ----------------------KNL--NLS-SNLLSGQI-PYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLN 296 (740)
Q Consensus 243 ----------------------~~L--~l~-~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~ 296 (740)
+.+ .++ .....+.. ...|..+++|+.|+|++|+|+++-+.+|.++..++.|+|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 111 111 12222233 3468899999999999999999999999999999999999
Q ss_pred CCCCCCCCchhcccccccceEEecCCcccCCCCCCCccc----cccCCCCCCCC
Q 004642 297 HNSLDGTIPLEMGKILLLQNLDLSHNNLSGTIPKTLRPM----YVDLSFNNLEG 346 (740)
Q Consensus 297 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~----~l~ls~N~l~~ 346 (740)
.|+|...-...|..+..|+.|+|.+|+|+...|-.|... .+++-.|++.+
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 999986666788899999999999999998888877654 36666666654
No 428
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80 E-value=8.3e-21 Score=201.71 Aligned_cols=226 Identities=26% Similarity=0.343 Sum_probs=178.7
Q ss_pred eecccceEEEEEE----eCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEecc
Q 004642 458 IGTGGYGSVYKAE----LPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 458 lg~G~~g~Vy~~~----~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
+|+|.||.|+.++ ...|..||.|..+.......... ....|..++..++ ||.+|++.-.+..+...+++.+|..
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 6899999999872 33577889988876544433222 4567888889886 9999999999999999999999999
Q ss_pred CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcc
Q 004642 533 RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYR 612 (740)
Q Consensus 533 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 612 (740)
+|.+...+.... .+++.........++-+++++|+. +++|||+|++||+++.+|++++.|||+++........
T Consensus 81 gg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred cchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 999988776654 456667777788899999999998 9999999999999999999999999999876433222
Q ss_pred cccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHH
Q 004642 613 TLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDII 692 (740)
Q Consensus 613 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 692 (740)
+||..|||||++. .+...+|.||||++.+||+||..||.. .....++...+..+. +-..
T Consensus 154 ---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----------~~~~~Il~~~~~~p~-----~l~~ 212 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----------DTMKRILKAELEMPR-----ELSA 212 (612)
T ss_pred ---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----------HHHHHHhhhccCCch-----hhhH
Confidence 8999999999998 466789999999999999999999874 122233332333221 2223
Q ss_pred HHHHHHHHcccCCCCCCCCH
Q 004642 693 LVSTIAFACLSSQPKSRPTM 712 (740)
Q Consensus 693 ~l~~li~~cl~~dP~~RPs~ 712 (740)
.+.+++..++..+|..|-..
T Consensus 213 ~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 213 EARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHhhCHHHHhcc
Confidence 36788888999999999644
No 429
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.80 E-value=1.6e-19 Score=204.61 Aligned_cols=238 Identities=31% Similarity=0.399 Sum_probs=162.1
Q ss_pred CEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccc
Q 004642 77 RITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFL 156 (740)
Q Consensus 77 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (740)
+++.|++.+|+++. ++. .+++|++|+|++|+|+. +|.. .++|++|+|++|.|+. +|..+ .+|+.|+|
T Consensus 223 ~L~~L~L~~N~Lt~-LP~----lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~-Lp~lp---~~L~~L~L 289 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA----LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTH-LPALP---SGLCKLWI 289 (788)
T ss_pred CCCEEEccCCcCCC-CCC----CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchhh-hhhch---hhcCEEEC
Confidence 56677777776664 332 24677777777777773 3432 3567777777777763 34322 56777888
Q ss_pred ccccccCCChhhhccccccceeecccccccccCCCcccccc--cCCCccccCCCCccccccCCCCEEecCCCcCCCcCCc
Q 004642 157 YSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLT--NISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPD 234 (740)
Q Consensus 157 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 234 (740)
++|+|+. +|. .+++|+.|+|++|+|++. |.....+. .+++|++++ +|.. ..+|+.|+|++|+|++ +|.
T Consensus 290 s~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~lp~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~ 359 (788)
T PRK15387 290 FGNQLTS-LPV---LPPGLQELSVSDNQLASL-PALPSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPT 359 (788)
T ss_pred cCCcccc-ccc---cccccceeECCCCccccC-CCCcccccccccccCcccc-cccc---ccccceEecCCCccCC-CCC
Confidence 8888874 343 246788888888888864 33333333 356777764 4431 2478899999999985 454
Q ss_pred cccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhccccccc
Q 004642 235 ELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLL 314 (740)
Q Consensus 235 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 314 (740)
. ..+|+.|++++|+|++ +|.. ..+|+.|++++|+|++ +|.. .++|+.|++++|+|+ .+|... .+|
T Consensus 360 l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L 424 (788)
T PRK15387 360 L---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPMLP---SGL 424 (788)
T ss_pred C---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcch---hhh
Confidence 3 3567888899999884 4543 2578899999999884 5543 357888999999998 466533 467
Q ss_pred ceEEecCCcccCCCCCCCccc----cccCCCCCCCCCcCcccc
Q 004642 315 QNLDLSHNNLSGTIPKTLRPM----YVDLSFNNLEGEIPTYLR 353 (740)
Q Consensus 315 ~~L~l~~N~l~~~~p~~~~~~----~l~ls~N~l~~~~p~~~~ 353 (740)
+.|++++|+|+ .+|..+..+ .+++++|+|+|..|..+.
T Consensus 425 ~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 425 LSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred hhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHH
Confidence 88999999998 678765443 488999999988777653
No 430
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=2.1e-21 Score=172.14 Aligned_cols=164 Identities=35% Similarity=0.558 Sum_probs=109.4
Q ss_pred cCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhccccccceeecccccccccCCCcccccccCCC
Q 004642 122 GSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISS 201 (740)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~ 201 (740)
.++++.+.|.||+|+++ .+|..+..+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~--------------- 92 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN--------------- 92 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh---------------
Confidence 34556666667777766 44555666777777777777776 55666677777777777666664
Q ss_pred ccccCCCCccccccCCCCEEecCCCcCCC-cCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcC
Q 004642 202 NQFHSSIPLEIGNFSALDTLDLSDNKIHG-IIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSI 280 (740)
Q Consensus 202 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 280 (740)
..|..|+.++.|+.|||.+|++.. .+|+.|..++.|+-|+|++|.+. .+|..++++++|+.|.+.+|.+- ..
T Consensus 93 -----~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~l 165 (264)
T KOG0617|consen 93 -----ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SL 165 (264)
T ss_pred -----cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hC
Confidence 556666666777777777766654 46666777777777777777776 56666777777777777777766 56
Q ss_pred CcccccCCCCCeEeccCCCCCCCCchhccc
Q 004642 281 PTEIGNCSALKNLTLNHNSLDGTIPLEMGK 310 (740)
Q Consensus 281 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 310 (740)
|..++.+..|++|++.+|+++ .+|.+++.
T Consensus 166 pkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 166 PKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred cHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 666777777777777777776 55555443
No 431
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=1.7e-19 Score=192.39 Aligned_cols=212 Identities=27% Similarity=0.472 Sum_probs=161.0
Q ss_pred HhccCCCccceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCe-EecCC
Q 004642 503 LSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSI-IHRDI 581 (740)
Q Consensus 503 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i-vH~dl 581 (740)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+... ...++|.-...+.++|+.||+|+|.. +| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 45789999999999999999999999999999999999873 34789999999999999999999987 55 89999
Q ss_pred CCCceEEcCCCcEEEeecccceeccc--CCCcccccccCCCccccccccccc-------cCCcchhHhHHHHHHHHHhCC
Q 004642 582 SSNNILLDSNLEASVADFGTARLLHV--DSSYRTLRAGTYGYIAPELAYTIV-------VTGKCDVYSFGVVALEVLMGT 652 (740)
Q Consensus 582 kp~NIll~~~~~~kl~DfG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwslGvil~elltg~ 652 (740)
+++|.++|....+|++|||+...... +........-..-|.|||.+.+.. .+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999877642 111111222345799999987641 456799999999999999999
Q ss_pred CCCCcccccccCCCCCchhhhhhc-cc--CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 653 HPGGLLSSLSSSSGPKIMLIDVLN-QR--LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 653 ~p~~~~~~~~~~~~~~~~~~~~~~-~~--l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.||+....... +++.+..+.+ .. .++...... +....+..++..||..+|++||+++++-..+....
T Consensus 156 ~~~~~~~~~~~---~~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 156 GPFDLRNLVED---PDEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred CccccccccCC---hHHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 99885332111 1222222222 11 222221111 22234888999999999999999999988886543
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=6e-21 Score=169.21 Aligned_cols=167 Identities=34% Similarity=0.523 Sum_probs=150.7
Q ss_pred cCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhccccccc
Q 004642 97 FSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLT 176 (740)
Q Consensus 97 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 176 (740)
+-++++++.|.||+|+++ .+|+.++.+.+|+.|++++|+|+ .+|..++.++.|+.|+++-|++. +.|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345677889999999998 67888999999999999999998 67889999999999999999998 8899999999999
Q ss_pred eeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCccCCCc
Q 004642 177 ELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQI 256 (740)
Q Consensus 177 ~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 256 (740)
.|||..|++... .+|..|..++.|+.|+|++|.+. ++|..++++++|+.|.+..|.+- .+
T Consensus 106 vldltynnl~e~------------------~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~l 165 (264)
T KOG0617|consen 106 VLDLTYNNLNEN------------------SLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SL 165 (264)
T ss_pred hhhccccccccc------------------cCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hC
Confidence 999999998743 56667777889999999999998 88999999999999999999997 67
Q ss_pred hhhhcCccCCceeccCCCcccCcCCcccccC
Q 004642 257 PYAIGKLFNLMYLDLSKNKLSGSIPTEIGNC 287 (740)
Q Consensus 257 ~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l 287 (740)
|..++.++.|+.|.+.+|+++ .+|+.++++
T Consensus 166 pkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 166 PKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred cHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 999999999999999999999 777777765
No 433
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=6.2e-19 Score=200.73 Aligned_cols=248 Identities=21% Similarity=0.236 Sum_probs=184.5
Q ss_pred HHhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC---CCccceeeeeeeecCe
Q 004642 447 NATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR---HRNIVKLYGFCLHKKC 523 (740)
Q Consensus 447 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~ 523 (740)
...+.|.|.+.||+|+||+||+|...+|+.||+|+-+.....+.....+ ++.+++ -+-|..+...+...+.
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q------~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQ------VMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHH------HHHhhchhhhcchHHHHHHHccCCc
Confidence 3457889999999999999999988789999999998887765433333 344444 2345666666677788
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-------CCcEEE
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-------NLEASV 596 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-------~~~~kl 596 (740)
-++|+||.+.|+|.+++...+ .++|.-++.+..|+++.+++||.. +||||||||+|.|+.. ..-++|
T Consensus 769 S~lv~ey~~~Gtlld~~N~~~---~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINTNK---VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred ceeeeeccccccHHHhhccCC---CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 899999999999999998443 689999999999999999999998 9999999999999953 234899
Q ss_pred eecccceeccc--CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhh
Q 004642 597 ADFGTARLLHV--DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDV 674 (740)
Q Consensus 597 ~DfG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 674 (740)
+|||.+..+.. +.......++|-.+-.+|...|..++..+|.|.++-+++-|+.|++-- . ..... ..
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-~-----~~g~~-----~~ 911 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-V-----KNGSS-----WM 911 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-h-----cCCcc-----ee
Confidence 99999987643 333445668899999999999999999999999999999999998642 0 00000 00
Q ss_pred hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 675 LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 675 ~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
+...++. .+..+ ...+|+..+|..|-..=|...++...+....
T Consensus 912 ~~~~~~R----y~~~~--~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 912 VKTNFPR----YWKRD--MWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred ccccchh----hhhHH--HHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 1111111 01111 1345666677744444477777777776553
No 434
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.77 E-value=2.3e-20 Score=204.56 Aligned_cols=239 Identities=31% Similarity=0.384 Sum_probs=140.1
Q ss_pred CEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccc
Q 004642 77 RITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFL 156 (740)
Q Consensus 77 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (740)
+.+.|+..+|.++... ....-.+|+++++++|+++ .+|+.++.+.+|+.|+.++|+|. .+|..+...++|+.|++
T Consensus 220 ~l~~L~a~~n~l~~~~---~~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLD---VHPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred chheeeeccCcceeec---cccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 4455555555555221 1223457999999999998 45699999999999999999996 77888888999999999
Q ss_pred ccccccCCChhhhccccccceeecccccccccCCCcccccc-------cCCCccccCCCCccccccCCCCEEecCCCcCC
Q 004642 157 YSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLT-------NISSNQFHSSIPLEIGNFSALDTLDLSDNKIH 229 (740)
Q Consensus 157 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 229 (740)
..|.+. .+|+.+..+++|++|+|..|+|....+ .+.... +.+.|.+.......=..++.|+.|++.+|.++
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~-~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPD-NFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhccccccch-HHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccc
Confidence 999998 667788889999999999999975433 333222 11223332221111112333444444444444
Q ss_pred CcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcc
Q 004642 230 GIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMG 309 (740)
Q Consensus 230 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 309 (740)
+..-..+.++.+|+.|+|++|+|.......+.++..|+.|+||+|+++ .+|..+.+++.|++|...+|++. ..| .+.
T Consensus 373 d~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~ 449 (1081)
T KOG0618|consen 373 DSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELA 449 (1081)
T ss_pred ccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhh
Confidence 433333444444444444444444333334444444444444444444 34444444444444444444444 333 444
Q ss_pred cccccceEEecCCccc
Q 004642 310 KILLLQNLDLSHNNLS 325 (740)
Q Consensus 310 ~l~~L~~L~l~~N~l~ 325 (740)
.++.|+.+|+|.|+|+
T Consensus 450 ~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 450 QLPQLKVLDLSCNNLS 465 (1081)
T ss_pred hcCcceEEecccchhh
Confidence 4444444444444444
No 435
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=1.5e-18 Score=198.17 Aligned_cols=221 Identities=27% Similarity=0.427 Sum_probs=121.8
Q ss_pred CEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccc
Q 004642 77 RITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFL 156 (740)
Q Consensus 77 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (740)
..+.|++.+++++..... + .++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|
T Consensus 179 ~~~~L~L~~~~LtsLP~~--I--p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLTTIPAC--I--PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcCcCCcc--c--ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 457788887777643221 1 256888888888888 4555443 57888888888887 4455443 46888888
Q ss_pred ccccccCCChhhhccccccceeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccc
Q 004642 157 YSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDEL 236 (740)
Q Consensus 157 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 236 (740)
++|++. .+|..+. .+|+.|+|++|+|+. +|..+. ++|+.|+|++|+|++ +|..+
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~---------------------~sL~~L~Ls~N~Lt~-LP~~l 302 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP---------------------EELRYLSVYDNSIRT-LPAHL 302 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC---------------------CCCcEEECCCCcccc-Ccccc
Confidence 888887 4565553 478888888888873 333221 245555555555553 33322
Q ss_pred cccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccce
Q 004642 237 TKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQN 316 (740)
Q Consensus 237 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 316 (740)
. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.
T Consensus 303 p--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~ 371 (754)
T PRK15370 303 P--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITT 371 (754)
T ss_pred h--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCE
Confidence 2 245555555555542 222221 345555555555543 333332 34555555555554 3343332 34555
Q ss_pred EEecCCcccCCCCCCCcc--ccccCCCCCCC
Q 004642 317 LDLSHNNLSGTIPKTLRP--MYVDLSFNNLE 345 (740)
Q Consensus 317 L~l~~N~l~~~~p~~~~~--~~l~ls~N~l~ 345 (740)
|+|++|+|+ .+|..+.. ..+++++|+|+
T Consensus 372 LdLs~N~Lt-~LP~~l~~sL~~LdLs~N~L~ 401 (754)
T PRK15370 372 LDVSRNALT-NLPENLPAALQIMQASRNNLV 401 (754)
T ss_pred EECCCCcCC-CCCHhHHHHHHHHhhccCCcc
Confidence 555555555 23333221 13455555554
No 436
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.76 E-value=2.2e-18 Score=196.65 Aligned_cols=223 Identities=28% Similarity=0.433 Sum_probs=143.2
Q ss_pred CCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccc
Q 004642 76 GRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLF 155 (740)
Q Consensus 76 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 155 (740)
..++.|+|.+|+++. ++... +++|+.|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. .+|+.|+
T Consensus 199 ~~L~~L~Ls~N~Lts-LP~~l---~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~ 268 (754)
T PRK15370 199 EQITTLILDNNELKS-LPENL---QGNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLD 268 (754)
T ss_pred cCCcEEEecCCCCCc-CChhh---ccCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEE
Confidence 478899999999884 44322 368999999999998 4566553 47999999999998 5676664 5899999
Q ss_pred cccccccCCChhhhccccccceeecccccccccCCCccc-ccc--cCCCccccCCCCccccccCCCCEEecCCCcCCCcC
Q 004642 156 LYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLF-RLT--NISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGII 232 (740)
Q Consensus 156 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~l~--~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 232 (740)
|++|+|+. +|..+. ++|+.|+|++|+|++. |..+. .+. ++++|+++. +|..+ .++|+.|++++|.+++ +
T Consensus 269 Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~L-P~~lp~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-L 340 (754)
T PRK15370 269 LFHNKISC-LPENLP--EELRYLSVYDNSIRTL-PAHLPSGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-L 340 (754)
T ss_pred CcCCccCc-cccccC--CCCcEEECCCCccccC-cccchhhHHHHHhcCCcccc-CCccc--cccceeccccCCcccc-C
Confidence 99999994 676554 5899999999999854 33221 121 345566553 33322 2456666666666664 4
Q ss_pred CccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhc----
Q 004642 233 PDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEM---- 308 (740)
Q Consensus 233 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~---- 308 (740)
|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+ .+|..+
T Consensus 341 P~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~ 411 (754)
T PRK15370 341 PASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFR 411 (754)
T ss_pred Chhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHh
Confidence 44432 46666666666665 3444332 45666666666666 3444433 24666666666665 333332
Q ss_pred ccccccceEEecCCccc
Q 004642 309 GKILLLQNLDLSHNNLS 325 (740)
Q Consensus 309 ~~l~~L~~L~l~~N~l~ 325 (740)
+.++.+..|++.+|+|+
T Consensus 412 ~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 412 GEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hcCCCccEEEeeCCCcc
Confidence 23355566666666655
No 437
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.75 E-value=2.1e-18 Score=195.47 Aligned_cols=222 Identities=27% Similarity=0.366 Sum_probs=175.0
Q ss_pred CCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccc
Q 004642 76 GRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLF 155 (740)
Q Consensus 76 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 155 (740)
..++.|+|.+|+++.. +. ..++|+.|+|++|.|+. +|.. .++|+.|+|++|+|+. +|.. +++|+.|+
T Consensus 242 ~~Lk~LdLs~N~LtsL-P~----lp~sL~~L~Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~Ld 308 (788)
T PRK15387 242 PELRTLEVSGNQLTSL-PV----LPPGLLELSIFSNPLTH-LPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELS 308 (788)
T ss_pred CCCcEEEecCCccCcc-cC----cccccceeeccCCchhh-hhhc---hhhcCEEECcCCcccc-cccc---ccccceeE
Confidence 4678899999998854 32 24789999999999984 4443 3678899999999985 4542 47899999
Q ss_pred cccccccCCChhhhccccccceeecccccccccCCCcccccc--cCCCccccCCCCccccccCCCCEEecCCCcCCCcCC
Q 004642 156 LYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLT--NISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIP 233 (740)
Q Consensus 156 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 233 (740)
|++|+|+++ |.. ..+|+.|++++|+|++ +|....++. +|++|+|++ +|.. .++|+.|++++|+|++ +|
T Consensus 309 LS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-LP~lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP 378 (788)
T PRK15387 309 VSDNQLASL-PAL---PSELCKLWAYNNQLTS-LPTLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LP 378 (788)
T ss_pred CCCCccccC-CCC---cccccccccccCcccc-ccccccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cc
Confidence 999999964 432 2468899999999986 444333443 578999986 4443 3578899999999995 66
Q ss_pred ccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccc
Q 004642 234 DELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILL 313 (740)
Q Consensus 234 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 313 (740)
.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|..+ .+|+.|+|++|+|+ .+|..+..+++
T Consensus 379 ~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~ 446 (788)
T PRK15387 379 AL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSS 446 (788)
T ss_pred cc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccC
Confidence 53 3579999999999995 4533 3679999999999985 66543 46889999999999 78999999999
Q ss_pred cceEEecCCcccCCCCCCC
Q 004642 314 LQNLDLSHNNLSGTIPKTL 332 (740)
Q Consensus 314 L~~L~l~~N~l~~~~p~~~ 332 (740)
|+.|+|++|+|++..|..+
T Consensus 447 L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 447 ETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCeEECCCCCCCchHHHHH
Confidence 9999999999999888765
No 438
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.73 E-value=2.1e-19 Score=197.03 Aligned_cols=243 Identities=30% Similarity=0.368 Sum_probs=202.9
Q ss_pred CCCCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccc
Q 004642 74 YEGRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRG 153 (740)
Q Consensus 74 ~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 153 (740)
.....+.++++++++++.. .-+..+.+|+.|+..+|+|. .+|..+...++|+.|++.+|.++ -+|..+.+++.|++
T Consensus 239 ~p~nl~~~dis~n~l~~lp--~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~t 314 (1081)
T KOG0618|consen 239 VPLNLQYLDISHNNLSNLP--EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRT 314 (1081)
T ss_pred ccccceeeecchhhhhcch--HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeee
Confidence 3467888999999988665 35788999999999999996 78889999999999999999998 56778888999999
Q ss_pred cccccccccCCChhhhccccc-cceeecccccccccCC---Cccccc--ccCCCccccCCCCccccccCCCCEEecCCCc
Q 004642 154 LFLYSNKLSGVLPQEIGNLKS-LTELYVTNNALGGLIP---STLFRL--TNISSNQFHSSIPLEIGNFSALDTLDLSDNK 227 (740)
Q Consensus 154 L~L~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~~---~~~~~l--~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ 227 (740)
|+|..|+|....+..+.-+.. |+.|+.+.|++....- ..+..+ ..+.+|.++...-+.+.++++|+.|+|++|+
T Consensus 315 LdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 315 LDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred eeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccc
Confidence 999999998555545554444 8888888888874431 111112 2468999998888889999999999999999
Q ss_pred CCCcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCC-Cch
Q 004642 228 IHGIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGT-IPL 306 (740)
Q Consensus 228 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~p~ 306 (740)
|.......+.++..|+.|+||+|+++ .+|..+.++..|++|....|+|. ..| .+..++.|+.+|++.|+|+.. +|.
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhh
Confidence 99665567899999999999999999 77899999999999999999998 667 799999999999999999854 344
Q ss_pred hcccccccceEEecCCcc
Q 004642 307 EMGKILLLQNLDLSHNNL 324 (740)
Q Consensus 307 ~~~~l~~L~~L~l~~N~l 324 (740)
... .++|++|||+||.-
T Consensus 472 ~~p-~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 472 ALP-SPNLKYLDLSGNTR 488 (1081)
T ss_pred hCC-CcccceeeccCCcc
Confidence 333 38999999999984
No 439
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=3.8e-17 Score=159.16 Aligned_cols=136 Identities=19% Similarity=0.243 Sum_probs=104.6
Q ss_pred cceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-----CCCccceeeeeeeecC---e-E
Q 004642 454 IKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-----RHRNIVKLYGFCLHKK---C-M 524 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~ 524 (740)
-.+.||+|+||.||. +++....+||++...... ..+.+.+|++++..+ .||||++++|++.++. . +
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCeEEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 356799999999996 443333479988764332 236789999999999 5799999999999863 3 3
Q ss_pred EEEEEe--ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCceEEcC----CCcEEEe
Q 004642 525 FLIYEY--MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHAL-SYLHHDCTLSIIHRDISSNNILLDS----NLEASVA 597 (740)
Q Consensus 525 ~lv~e~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~~~~~ivH~dlkp~NIll~~----~~~~kl~ 597 (740)
.+|+|| +++++|.+++.+. .+++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.++|+
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 478999 5679999999653 24444 35677888777 999999 9999999999999974 3479999
Q ss_pred e-cccce
Q 004642 598 D-FGTAR 603 (740)
Q Consensus 598 D-fG~a~ 603 (740)
| ||...
T Consensus 152 Dg~G~~~ 158 (210)
T PRK10345 152 DNIGEST 158 (210)
T ss_pred ECCCCcc
Confidence 9 55443
No 440
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.2e-17 Score=166.97 Aligned_cols=195 Identities=22% Similarity=0.307 Sum_probs=132.9
Q ss_pred CCCccceeeeeeee---------------------------cCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHH
Q 004642 507 RHRNIVKLYGFCLH---------------------------KKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVK 559 (740)
Q Consensus 507 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 559 (740)
+|||||++.++|.+ +...|+||...+. +|..++.... .+.....-|+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 59999999987753 2357899987765 7877776543 45566677899
Q ss_pred HHHHHHHHHHhcCCCCeEecCCCCCceEEc--CCC--cEEEeecccceecccC------CCcccccccCCCccccccccc
Q 004642 560 SVAHALSYLHHDCTLSIIHRDISSNNILLD--SNL--EASVADFGTARLLHVD------SSYRTLRAGTYGYIAPELAYT 629 (740)
Q Consensus 560 ~ia~~L~~LH~~~~~~ivH~dlkp~NIll~--~~~--~~kl~DfG~a~~~~~~------~~~~~~~~gt~~y~aPE~~~~ 629 (740)
|++.|+.|||++ ||.|||+|++|||+. +|+ ...|+|||.+-.-... ....-...|...-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 999999999999995 333 3678999987421110 011122357888999998764
Q ss_pred cc------cCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHccc
Q 004642 630 IV------VTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLS 703 (740)
Q Consensus 630 ~~------~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~ 703 (740)
.+ -..|+|.|+.|-+.||+++...||-.....- -.........+++ .+. .....+.+++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~------L~~r~Yqe~qLPa-lp~---~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML------LDTRTYQESQLPA-LPS---RVPPVARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe------echhhhhhhhCCC-Ccc---cCChHHHHHHHHHhc
Confidence 32 2248999999999999999999986421100 0000111111111 111 112237889999999
Q ss_pred CCCCCCCCHHHHHHHH
Q 004642 704 SQPKSRPTMQRISQEL 719 (740)
Q Consensus 704 ~dP~~RPs~~ev~~~L 719 (740)
.||.+|++..-....+
T Consensus 496 r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVL 511 (598)
T ss_pred CCccccCCccHHHhHH
Confidence 9999999865444443
No 441
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=1.5e-18 Score=181.12 Aligned_cols=175 Identities=23% Similarity=0.370 Sum_probs=135.6
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
...|+.|+++...+|.+|+.+.......++.....++.|++.|++| + +.+|+|+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 3579999999999999999876666678899999999999999999 5 899999999999999999999999999
Q ss_pred ceecccCC------CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhh
Q 004642 602 ARLLHVDS------SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDV 674 (740)
Q Consensus 602 a~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 674 (740)
........ ...+...||..||+||.+.+..|+.|+||||+|++++|+++ =..+++.. ....++
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----------~t~~d~ 472 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----------ATLTDI 472 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----------Hhhhhh
Confidence 98765443 12234579999999999999999999999999999999997 33333221 112222
Q ss_pred hcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 004642 675 LNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 716 (740)
Q Consensus 675 ~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~ 716 (740)
-+..+++......++ -..++.++++..|.+||++.++.
T Consensus 473 r~g~ip~~~~~d~p~----e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 473 RDGIIPPEFLQDYPE----EYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hcCCCChHHhhcCcH----HHHHHHHhcCCCcccCchHHHHh
Confidence 233333222222222 34688899999999999665544
No 442
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=5.9e-17 Score=162.04 Aligned_cols=146 Identities=21% Similarity=0.211 Sum_probs=112.3
Q ss_pred cccccceeeecccceEEEEEE--eCCCcEEEEEEccCCcccc---------------------hHHHHHHHHHHHHHhcc
Q 004642 450 EDFHIKYCIGTGGYGSVYKAE--LPEGKVVALKKLHHSETED---------------------SAFVKSFQNEAHVLSTV 506 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~l 506 (740)
..|.+.+.||+|+||.||+|. ..+|+.||+|+++...... ......+..|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999997 5689999999987543210 00123467899999999
Q ss_pred CCCc--cceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCC
Q 004642 507 RHRN--IVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLS-IIHRDISS 583 (740)
Q Consensus 507 ~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-ivH~dlkp 583 (740)
.+.. +.+++++ ...++||||++++++........ .....+...++.||+.++++||+. + ++||||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 7533 3444443 23589999999988866543222 345566788999999999999999 9 99999999
Q ss_pred CceEEcCCCcEEEeecccceecc
Q 004642 584 NNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 584 ~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
+||+++ ++.++|+|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999987543
No 443
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.72 E-value=1.1e-16 Score=195.35 Aligned_cols=247 Identities=24% Similarity=0.267 Sum_probs=140.8
Q ss_pred CCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhccccccceee
Q 004642 100 FPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTELY 179 (740)
Q Consensus 100 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 179 (740)
+.+|+.|+|++|.+. .++..+..+++|++|+|++|+.-..+|. ++.+++|+.|+|++|.....+|..+.++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 456666777666665 4555566667777777766543334453 56666777777776655556666667777777777
Q ss_pred cccccccccCCCccccccc-----CCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCcc--
Q 004642 180 VTNNALGGLIPSTLFRLTN-----ISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLL-- 252 (740)
Q Consensus 180 L~~N~l~~~~~~~~~~l~~-----l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l-- 252 (740)
+++|...+.+|..+ ++.+ +++|...+.+|.. .++|++|+|++|.++ .+|..+ .+++|+.|++.++..
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK 761 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh
Confidence 76654434444432 2222 2333333333322 245666777777665 344433 345555555544221
Q ss_pred -----CCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccceEEecCCcccCC
Q 004642 253 -----SGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLSGT 327 (740)
Q Consensus 253 -----~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 327 (740)
....+..+...++|+.|+|++|...+.+|..++++++|+.|+|++|...+.+|... .+++|+.|++++|..-..
T Consensus 762 l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~ 840 (1153)
T PLN03210 762 LWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRT 840 (1153)
T ss_pred ccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccc
Confidence 11111122233567777777777666777777777777777777765444666554 567777777777655555
Q ss_pred CCCCCccc-cccCCCCCCCCCcCccccCCC
Q 004642 328 IPKTLRPM-YVDLSFNNLEGEIPTYLRGNP 356 (740)
Q Consensus 328 ~p~~~~~~-~l~ls~N~l~~~~p~~~~~~~ 356 (740)
+|.....+ .+++++|.++ .+|.++..++
T Consensus 841 ~p~~~~nL~~L~Ls~n~i~-~iP~si~~l~ 869 (1153)
T PLN03210 841 FPDISTNISDLNLSRTGIE-EVPWWIEKFS 869 (1153)
T ss_pred ccccccccCEeECCCCCCc-cChHHHhcCC
Confidence 55543333 4667777766 4555444333
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=6.9e-19 Score=186.51 Aligned_cols=112 Identities=23% Similarity=0.308 Sum_probs=48.9
Q ss_pred ccCCCCEEecCCCcCCCc----CCccccccCCCCeecccCCccCCCc----hhhhcCccCCceeccCCCcccCcCCcccc
Q 004642 214 NFSALDTLDLSDNKIHGI----IPDELTKLSQLKNLNLSSNLLSGQI----PYAIGKLFNLMYLDLSKNKLSGSIPTEIG 285 (740)
Q Consensus 214 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~l~ 285 (740)
.+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|++|++++|.+++.....+.
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~ 242 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALA 242 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHH
Confidence 344455555555555431 1122333345555555555554322 22233444555555555555432222221
Q ss_pred c-----CCCCCeEeccCCCCCC----CCchhcccccccceEEecCCccc
Q 004642 286 N-----CSALKNLTLNHNSLDG----TIPLEMGKILLLQNLDLSHNNLS 325 (740)
Q Consensus 286 ~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~ 325 (740)
. .++|++|++++|.++. .+...+..+++|+.+++++|+++
T Consensus 243 ~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 243 SALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 1 2455555555555541 12233334445555555555554
No 445
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.71 E-value=1.1e-16 Score=195.31 Aligned_cols=245 Identities=22% Similarity=0.276 Sum_probs=149.7
Q ss_pred CCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccc
Q 004642 76 GRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLF 155 (740)
Q Consensus 76 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 155 (740)
..++.|+|.++.+.. +.. .+..+++|+.|+|++|...+.+| .++.+++|++|+|++|..-..+|..+.++++|+.|+
T Consensus 611 ~~L~~L~L~~s~l~~-L~~-~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 611 ENLVKLQMQGSKLEK-LWD-GVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred cCCcEEECcCccccc-ccc-ccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 467778888877653 322 46788999999999876555666 488899999999999876668899999999999999
Q ss_pred cccccccCCChhhhccccccceeecccccccccCCCcccccc--cCCCccccCCCCccccccCCCCEEecCCCcCC----
Q 004642 156 LYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLT--NISSNQFHSSIPLEIGNFSALDTLDLSDNKIH---- 229 (740)
Q Consensus 156 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~---- 229 (740)
+++|...+.+|..+ ++++|+.|+|++|...+..|....++. +++.|.+. .+|..+ .+++|++|++.++...
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~ 764 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWE 764 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccc-cccccccccccccchhhccc
Confidence 99876555667655 788999999998876666665544443 35566654 344433 3455555555442211
Q ss_pred ---CcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCch
Q 004642 230 ---GIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPL 306 (740)
Q Consensus 230 ---~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 306 (740)
...+......++|+.|+|++|...+.+|..++++++|+.|++++|..-+.+|..+ ++++|+.|+|++|.....+|.
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~ 843 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD 843 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc
Confidence 1111112223455555555555544555555555555555555554333444433 455555555555443333333
Q ss_pred hcccccccceEEecCCcccCCCCCC
Q 004642 307 EMGKILLLQNLDLSHNNLSGTIPKT 331 (740)
Q Consensus 307 ~~~~l~~L~~L~l~~N~l~~~~p~~ 331 (740)
. ..+|+.|+|++|.++ .+|.+
T Consensus 844 ~---~~nL~~L~Ls~n~i~-~iP~s 864 (1153)
T PLN03210 844 I---STNISDLNLSRTGIE-EVPWW 864 (1153)
T ss_pred c---ccccCEeECCCCCCc-cChHH
Confidence 2 234555555555554 34443
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.1e-16 Score=158.60 Aligned_cols=137 Identities=18% Similarity=0.325 Sum_probs=115.2
Q ss_pred eeeecccceEEEEEEeCCCcEEEEEEccCCcccch-----HHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEe
Q 004642 456 YCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDS-----AFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEY 530 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 530 (740)
+.||+|++|.||+|.. .|..+++|+......... .....+.+|++++..++|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999987 678899998765433221 1234678899999999999998888887777888999999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
++|++|.+++.... + .+..++.+++.+|.++|+. +++|+|++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999998886432 2 7888999999999999998 999999999999999 78899999999864
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.2e-16 Score=156.40 Aligned_cols=148 Identities=22% Similarity=0.224 Sum_probs=113.0
Q ss_pred HHHHHHhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcccch-------------------HHHHHHHHHHHHH
Q 004642 443 EDLINATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDS-------------------AFVKSFQNEAHVL 503 (740)
Q Consensus 443 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l 503 (740)
+++......|.+.+.||+|+||.||++..++|+.||||++........ .....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444445888899999999999999888899999998765321100 0112366788889
Q ss_pred hccCCC--ccceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 004642 504 STVRHR--NIVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDI 581 (740)
Q Consensus 504 ~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dl 581 (740)
..+.|+ .+...++. ...++||||+++++|...... .....++.+++.++.++|+. +++||||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 888777 34444432 345899999999988755431 23456889999999999998 9999999
Q ss_pred CCCceEEcCCCcEEEeecccceecc
Q 004642 582 SSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 582 kp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
||+||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996543
No 448
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=4.3e-18 Score=180.40 Aligned_cols=252 Identities=24% Similarity=0.258 Sum_probs=180.0
Q ss_pred EEcCCCCccccccCcccCCCCCccEEeCCCCCcccC----CCccccCCCCCceeecccccccc------cCchhhccccc
Q 004642 81 IDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGS----IPPQIGSLSKLKCLYLHGNNLTG------IIPKEIGSLRN 150 (740)
Q Consensus 81 l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~------~~p~~l~~l~~ 150 (740)
|+|..+++.+.--...|..+++|+.|+|+++.++.. ++..+...+.|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 566666666443334566777899999999988532 45567777889999999988762 23456777889
Q ss_pred ccccccccccccCCChhhhccccc---cceeecccccccccCCCcccccccCCCccccCCCCcccccc-CCCCEEecCCC
Q 004642 151 LRGLFLYSNKLSGVLPQEIGNLKS---LTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNF-SALDTLDLSDN 226 (740)
Q Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l-~~L~~L~L~~N 226 (740)
|+.|+|++|.+.+..+..+..+.+ |++|++++|++++.... .+...+..+ ++|+.|+|++|
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~---------------~l~~~l~~~~~~L~~L~L~~n 147 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLR---------------LLAKGLKDLPPALEKLVLGRN 147 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHH---------------HHHHHHHhCCCCceEEEcCCC
Confidence 999999999998777777776666 99999999988742111 112234445 78999999999
Q ss_pred cCCCc----CCccccccCCCCeecccCCccCCC----chhhhcCccCCceeccCCCcccCcC----CcccccCCCCCeEe
Q 004642 227 KIHGI----IPDELTKLSQLKNLNLSSNLLSGQ----IPYAIGKLFNLMYLDLSKNKLSGSI----PTEIGNCSALKNLT 294 (740)
Q Consensus 227 ~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~----~~~l~~l~~L~~L~ 294 (740)
.+++. ++..+..+++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.. ...+..+++|++|+
T Consensus 148 ~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ 227 (319)
T cd00116 148 RLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLN 227 (319)
T ss_pred cCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEe
Confidence 99842 334566778899999999999853 3344556679999999999987543 34466788899999
Q ss_pred ccCCCCCCCCchhccc-----ccccceEEecCCcccC--------CCCCCCccccccCCCCCCCCC
Q 004642 295 LNHNSLDGTIPLEMGK-----ILLLQNLDLSHNNLSG--------TIPKTLRPMYVDLSFNNLEGE 347 (740)
Q Consensus 295 L~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~--------~~p~~~~~~~l~ls~N~l~~~ 347 (740)
+++|.+++.....+.. .+.|+.|++++|.+++ .+|..-....+|+++|.++..
T Consensus 228 ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 228 LGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred cCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 9999998644433332 3789999999999872 222221223589999998854
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=3.9e-16 Score=153.21 Aligned_cols=132 Identities=20% Similarity=0.360 Sum_probs=108.1
Q ss_pred eecccceEEEEEEeCCCcEEEEEEccCCcccc-----hHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEecc
Q 004642 458 IGTGGYGSVYKAELPEGKVVALKKLHHSETED-----SAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYME 532 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (740)
||+|+||.||+|.+ +|..+++|+........ .....++.+|++++..++|+++.....++...+..++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 79999999999985 67889999865432211 1123567889999999998876666666666777899999999
Q ss_pred CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 533 RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 533 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
|++|.+.+..... .++.+++.+|.++|+. +++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEGND----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhcHH----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999887754321 6899999999999998 999999999999999 78999999999865
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.66 E-value=3.4e-16 Score=176.61 Aligned_cols=142 Identities=19% Similarity=0.268 Sum_probs=113.4
Q ss_pred HhcccccceeeecccceEEEEEEeCCCcEEEEEEccCCcc-----cchHHHHHHHHHHHHHhccCCCccceeeeeeeecC
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSET-----EDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKK 522 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (740)
....|...+.||+|+||.||++.+.... +++|+...... .+....+++.+|++++..++|++++....++....
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3455567889999999999999875443 44443222111 11122457889999999999999998888888877
Q ss_pred eEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccc
Q 004642 523 CMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTA 602 (740)
Q Consensus 523 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a 602 (740)
..++||||+++++|.+++. ....++.+++.+|.|||+. +++|||+||+||++ .++.++|+|||++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 8899999999999988774 3467899999999999998 99999999999999 6778999999999
Q ss_pred eec
Q 004642 603 RLL 605 (740)
Q Consensus 603 ~~~ 605 (740)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=1.4e-16 Score=177.86 Aligned_cols=214 Identities=23% Similarity=0.317 Sum_probs=142.6
Q ss_pred hcccccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEE
Q 004642 449 TEDFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLI 527 (740)
Q Consensus 449 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (740)
..+|+.++.|..|+||.||.+++++ .+++|. ++.+.... +++ ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~li-------lRn---ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI-------LRN---ILTFAGNPFVV--------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccchh-------hhc---cccccCCccee---------------
Confidence 4688999999999999999998764 456777 44432211 111 23333344443
Q ss_pred EEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceeccc
Q 004642 528 YEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHV 607 (740)
Q Consensus 528 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~ 607 (740)
|+=...+...+ .++. +++.+++|+|+. ||+|||+||+|.+++.-|++|++|||+++....
T Consensus 136 ------gDc~tllk~~g---~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ------GDCATLLKNIG---PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ------chhhhhcccCC---CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 22223333322 2222 237889999998 999999999999999999999999999875321
Q ss_pred CCC---------------cccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhh
Q 004642 608 DSS---------------YRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLI 672 (740)
Q Consensus 608 ~~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 672 (740)
... .....+||+.|.|||++....|...+|.|++|+|+||++-|+.||..... ++.+.
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-------eelfg 268 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-------EELFG 268 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-------HHHHh
Confidence 100 11234799999999999999999999999999999999999999875422 11122
Q ss_pred hhhcccCC-CcchhhhHHHHHHHHHHHHHcccCCCCCCC---CHHHHHHH
Q 004642 673 DVLNQRLS-PPVNQKIVQDIILVSTIAFACLSSQPKSRP---TMQRISQE 718 (740)
Q Consensus 673 ~~~~~~l~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~ev~~~ 718 (740)
.++...+. ++. ...-..+..+++.+.++.+|..|- .+-+|.+|
T Consensus 269 ~visd~i~wpE~---dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h 315 (1205)
T KOG0606|consen 269 QVISDDIEWPEE---DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQH 315 (1205)
T ss_pred hhhhhhcccccc---CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhc
Confidence 22211111 111 111122377899999999999993 44454444
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3.6e-15 Score=144.80 Aligned_cols=139 Identities=22% Similarity=0.230 Sum_probs=99.3
Q ss_pred ceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHH---------------------HHHHHHHHhccCCC--cc
Q 004642 455 KYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKS---------------------FQNEAHVLSTVRHR--NI 511 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~---------------------~~~E~~~l~~l~h~--ni 511 (740)
.+.||+|+||.||+|...+|+.||||++............. ...|.+.+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988789999999987643221111111 13455666665433 24
Q ss_pred ceeeeeeeecCeEEEEEEeccCCCchh-hhcCCCccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEc
Q 004642 512 VKLYGFCLHKKCMFLIYEYMERGSLFC-VLHDDDEAIELNWTKRVNIVKSVAHALSYLHH-DCTLSIIHRDISSNNILLD 589 (740)
Q Consensus 512 v~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~dlkp~NIll~ 589 (740)
.+.+++ ...++||||++++.+.. .+.... .. .+...++.+++.++.++|. . +|+|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444443 23589999999965432 121111 11 5677899999999999998 7 999999999999999
Q ss_pred CCCcEEEeecccceecc
Q 004642 590 SNLEASVADFGTARLLH 606 (740)
Q Consensus 590 ~~~~~kl~DfG~a~~~~ 606 (740)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999997654
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=1.6e-14 Score=134.66 Aligned_cols=135 Identities=21% Similarity=0.208 Sum_probs=113.9
Q ss_pred cceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCC--CccceeeeeeeecCeEEEEEEec
Q 004642 454 IKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRH--RNIVKLYGFCLHKKCMFLIYEYM 531 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~ 531 (740)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.++..++| ..+++++++...++..+++|||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 45779999999999998744 7899999876543 2568889999999976 58999999888888899999999
Q ss_pred cCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 532 ERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 532 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
+++.+... +......++.+++.+++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 98777543 4566777899999999999986334799999999999999989999999999864
No 454
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=3.7e-14 Score=142.18 Aligned_cols=139 Identities=17% Similarity=0.258 Sum_probs=106.3
Q ss_pred ceeee-cccceEEEEEEeCCCcEEEEEEccCCcc----------cchHHHHHHHHHHHHHhccCCCcc--ceeeeeeeec
Q 004642 455 KYCIG-TGGYGSVYKAELPEGKVVALKKLHHSET----------EDSAFVKSFQNEAHVLSTVRHRNI--VKLYGFCLHK 521 (740)
Q Consensus 455 ~~~lg-~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 521 (740)
...|| .|+.|+||.+... +..++||.+..... .......++.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999874 77889998854211 011223567889999999998774 6677765432
Q ss_pred C----eEEEEEEeccC-CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEE
Q 004642 522 K----CMFLIYEYMER-GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASV 596 (740)
Q Consensus 522 ~----~~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 596 (740)
. ..++||||++| .+|.+++... .++.. .+.+|+.++.+||+. ||+|+||||.|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6888887542 23432 367899999999999 9999999999999999899999
Q ss_pred eecccceec
Q 004642 597 ADFGTARLL 605 (740)
Q Consensus 597 ~DfG~a~~~ 605 (740)
+|||.++..
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999998753
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.55 E-value=5.3e-16 Score=162.14 Aligned_cols=175 Identities=30% Similarity=0.495 Sum_probs=127.3
Q ss_pred CCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhccccccceeecccccccccCCCcccccccCCCc
Q 004642 123 SLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISSN 202 (740)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~n 202 (740)
.++.-...||+.|++. ++|..+..+..|+.|.|+.|.+. .+|..++++..|+.|||+.|+++
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS---------------- 134 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS---------------- 134 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh----------------
Confidence 4455566777777777 66777777777777777777776 66777777777777777777776
Q ss_pred cccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCc
Q 004642 203 QFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPT 282 (740)
Q Consensus 203 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 282 (740)
.+|..+..++ |+.|-+++|+++ .+|..++.+..|..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|+
T Consensus 135 ----~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 135 ----HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred ----cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 4455555555 777777777777 56777777777777777777776 55667777777777777777777 4566
Q ss_pred ccccCCCCCeEeccCCCCCCCCchhcccccccceEEecCCccc
Q 004642 283 EIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLS 325 (740)
Q Consensus 283 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 325 (740)
.+..| .|..||+++|+++ .+|..|.+|..|++|.|.+|+|+
T Consensus 207 El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 207 ELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred HHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 66644 4777788888877 77777778888888888888877
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=1.4e-15 Score=170.61 Aligned_cols=257 Identities=22% Similarity=0.281 Sum_probs=186.5
Q ss_pred cccccceeeecccceEEEEEEeC--CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccC-CCccceeeeeeeecCeEEE
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELP--EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVR-HRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 526 (740)
..|.+.+.||+|.|+.|-..... ....+|+|.+.... ...........|..+-..+. |+|++.+++...+.+..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 46777888999999999887543 34456667665543 22233455666887777776 9999999999999999999
Q ss_pred EEEeccCCCchhhh-cCCCccccCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCceEEcCCC-cEEEeecccce
Q 004642 527 IYEYMERGSLFCVL-HDDDEAIELNWTKRVNIVKSVAHALSYLH-HDCTLSIIHRDISSNNILLDSNL-EASVADFGTAR 603 (740)
Q Consensus 527 v~e~~~~g~L~~~l-~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH~dlkp~NIll~~~~-~~kl~DfG~a~ 603 (740)
..+|.+++++.+.+ +.... ..+....-..+.|+..++.|+| +. ++.|+|+||+|.+++..+ ..++.|||+|.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~--~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDST--GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCcccccccccccccCCcc--CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999999888 43321 2344556678999999999999 77 999999999999999999 99999999998
Q ss_pred eccc-CCC--ccccccc-CCCcccccccccc-ccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc
Q 004642 604 LLHV-DSS--YRTLRAG-TYGYIAPELAYTI-VVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 604 ~~~~-~~~--~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.+.. ... .....+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++....... ....+........
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~ 251 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG--RYSSWKSNKGRFT 251 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc--cceeecccccccc
Confidence 7765 222 2234578 9999999998884 345678999999999999999999775432110 0011111100000
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQEL 719 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 719 (740)
..+ +..-.....++..+++..+|..|.+.+++...-
T Consensus 252 ~~~-----~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~ 287 (601)
T KOG0590|consen 252 QLP-----WNSISDQAHDLLHKILKENPSNRLSIEELKLDN 287 (601)
T ss_pred cCc-----cccCChhhhhcccccccCCchhccccccccccc
Confidence 111 111112256788889999999999988876544
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.52 E-value=8.5e-16 Score=160.61 Aligned_cols=196 Identities=33% Similarity=0.460 Sum_probs=171.5
Q ss_pred CCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhcccccccee
Q 004642 99 CFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTEL 178 (740)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 178 (740)
.+..-...||+.|++. .+|..+..+-.|+.|.|.+|.|. .+|..++++..|++|||+.|+++ ..|..+..|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 4566788999999998 78999999999999999999998 78999999999999999999998 7788888877 9999
Q ss_pred ecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCccCCCchh
Q 004642 179 YVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQIPY 258 (740)
Q Consensus 179 ~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 258 (740)
-+++|+++ .+|+.++....|..|+.+.|.|. .+|..++++.+|+.|.+..|++. .+|.
T Consensus 149 i~sNNkl~--------------------~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 149 IVSNNKLT--------------------SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred EEecCccc--------------------cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 99999997 67888888899999999999999 67888999999999999999998 5566
Q ss_pred hhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccc---cceEEecCCc
Q 004642 259 AIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILL---LQNLDLSHNN 323 (740)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~l~~N~ 323 (740)
.+..| .|..||++.|+++ .+|-.|.+|+.|++|-|.+|.|. ..|..++..-+ -++|+..-.+
T Consensus 207 El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 207 ELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred HHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 77744 6999999999999 89999999999999999999999 77776654333 3556655553
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.49 E-value=5.5e-14 Score=160.32 Aligned_cols=118 Identities=35% Similarity=0.609 Sum_probs=85.9
Q ss_pred ccceeeeCCC-----CCEEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeeccccccccc
Q 004642 66 NWVGITCDYE-----GRITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGI 140 (740)
Q Consensus 66 ~w~gv~c~~~-----~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 140 (740)
.|.||.|+.. .+|+.|+|.++++.|.++. .+..+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|++++.
T Consensus 403 ~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~-~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~ 481 (623)
T PLN03150 403 PWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPN-DISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481 (623)
T ss_pred ccccceeeccCCCCceEEEEEECCCCCccccCCH-HHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCC
Confidence 7999999631 2477777777777777665 467777777777777777777777777777777777777777777
Q ss_pred CchhhcccccccccccccccccCCChhhhccc-cccceeeccccc
Q 004642 141 IPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNL-KSLTELYVTNNA 184 (740)
Q Consensus 141 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~ 184 (740)
+|+.++++++|+.|+|++|++++.+|..++.+ .++..+++.+|.
T Consensus 482 iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 482 IPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCc
Confidence 77777777777777777777777777776653 355666666664
No 459
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=1.2e-13 Score=157.68 Aligned_cols=119 Identities=34% Similarity=0.575 Sum_probs=83.2
Q ss_pred CCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccceEEecC
Q 004642 242 LKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSH 321 (740)
Q Consensus 242 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 321 (740)
++.|+|++|.++|.+|..+..+++|+.|+|++|.++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 56677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CcccCCCCCCCccccccCCCCCCCCCcCccccCCCCCcccCCccCCCCCCCCCCcc
Q 004642 322 NNLSGTIPKTLRPMYVDLSFNNLEGEIPTYLRGNPPKSFVGNKGLSGNVEGFPSSS 377 (740)
Q Consensus 322 N~l~~~~p~~~~~~~l~ls~N~l~~~~p~~~~~~~~~~~~~n~~~~~~~~~~~~~s 377 (740)
|+++|.+|..+....+ ......+.+|+.+|+.+ ..+.|.
T Consensus 500 N~l~g~iP~~l~~~~~----------------~~~~l~~~~N~~lc~~p-~l~~C~ 538 (623)
T PLN03150 500 NSLSGRVPAALGGRLL----------------HRASFNFTDNAGLCGIP-GLRACG 538 (623)
T ss_pred CcccccCChHHhhccc----------------cCceEEecCCccccCCC-CCCCCc
Confidence 7777777765533211 11123466778888743 344553
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=8e-14 Score=152.15 Aligned_cols=201 Identities=40% Similarity=0.561 Sum_probs=162.6
Q ss_pred EEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccc-cccccccccccccCCChhhhccccccceeecccc
Q 004642 105 SLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLR-NLRGLFLYSNKLSGVLPQEIGNLKSLTELYVTNN 183 (740)
Q Consensus 105 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 183 (740)
.|+++.|.+... ...+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 688888888533 334566688999999999998 5566667774 9999999999998 55577889999999999999
Q ss_pred cccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCccCCCchhhhcCc
Q 004642 184 ALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKL 263 (740)
Q Consensus 184 ~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 263 (740)
+++ .+|...+..++|+.|++++|+++ .+|.....+..|+.|.+++|.+. ..+..+.++
T Consensus 174 ~l~--------------------~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~ 231 (394)
T COG4886 174 DLS--------------------DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNL 231 (394)
T ss_pred hhh--------------------hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhc
Confidence 997 34444457789999999999999 56766667778999999999654 445678888
Q ss_pred cCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccceEEecCCcccCCCCCCCc
Q 004642 264 FNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLSGTIPKTLR 333 (740)
Q Consensus 264 ~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 333 (740)
.++..+.+.+|++. ..+..++.++++++|++++|+++ .++. ++.+.+++.|++++|.+....|....
T Consensus 232 ~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 232 KNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred ccccccccCCceee-eccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhc
Confidence 99999999999997 34778889999999999999999 4444 88999999999999999877666543
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.40 E-value=1.3e-12 Score=142.54 Aligned_cols=144 Identities=22% Similarity=0.257 Sum_probs=100.7
Q ss_pred ceeeecccceEEEEEEeCCCcEEEEEEccCCcccch-------------------------------HHHH------HHH
Q 004642 455 KYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDS-------------------------------AFVK------SFQ 497 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-------------------------------~~~~------~~~ 497 (740)
.+.||.|++|.||+|++++|+.||||+.+......- +..+ .|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999875421110 0000 244
Q ss_pred HHHHHHhcc----CCCccceeeeee-eecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHH-HHHHHHhc
Q 004642 498 NEAHVLSTV----RHRNIVKLYGFC-LHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAH-ALSYLHHD 571 (740)
Q Consensus 498 ~E~~~l~~l----~h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~-~L~~LH~~ 571 (740)
+|++.+.++ +|.+-+.+-..+ ......++||||++|++|.+....... .. .+..++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhC
Confidence 566655555 232223322222 224457999999999999887643211 11 23456666666 46788988
Q ss_pred CCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 572 CTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 572 ~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
|++|+|++|.||+++.++.++++|||++..+.
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999998764
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.40 E-value=3e-13 Score=147.64 Aligned_cols=217 Identities=36% Similarity=0.520 Sum_probs=169.8
Q ss_pred CccceeeeCCCCCEE--EEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCC-CCceeecccccccccC
Q 004642 65 CNWVGITCDYEGRIT--DIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLS-KLKCLYLHGNNLTGII 141 (740)
Q Consensus 65 c~w~gv~c~~~~~v~--~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~ 141 (740)
+.+.+..+....... .+++..+.+...+. .+..++.++.|++.+|.++ .+++..+.++ +|+.|++++|.+. .+
T Consensus 80 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l 155 (394)
T COG4886 80 ISSLDGSENLLNLLPLPSLDLNLNRLRSNIS--ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SL 155 (394)
T ss_pred cccccccccccCCCCCceeeccccccccCch--hhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hh
Confidence 455555554333222 46666666543333 3455688999999999999 5666777775 9999999999998 55
Q ss_pred chhhcccccccccccccccccCCChhhhccccccceeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEE
Q 004642 142 PKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTL 221 (740)
Q Consensus 142 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L 221 (740)
|..+..+++|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|........|++|
T Consensus 156 ~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~--------------------~l~~~~~~~~~L~~l 214 (394)
T COG4886 156 PSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS--------------------DLPPEIELLSALEEL 214 (394)
T ss_pred hhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc--------------------cCchhhhhhhhhhhh
Confidence 677899999999999999999 45555568899999999999998 444444555679999
Q ss_pred ecCCCcCCCcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCC
Q 004642 222 DLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLD 301 (740)
Q Consensus 222 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 301 (740)
.+++|++. ..+..+.++.++..|.+.+|++.. .+..++.++++++|++++|+++. ++. ++.+.+|+.|++++|.+.
T Consensus 215 ~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 215 DLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred hhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceeccccccccc-ccc-ccccCccCEEeccCcccc
Confidence 99999655 456778999999999999999974 36678889999999999999984 444 899999999999999999
Q ss_pred CCCchhccc
Q 004642 302 GTIPLEMGK 310 (740)
Q Consensus 302 ~~~p~~~~~ 310 (740)
...|.....
T Consensus 291 ~~~~~~~~~ 299 (394)
T COG4886 291 NALPLIALL 299 (394)
T ss_pred ccchhhhcc
Confidence 766654443
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=8.7e-13 Score=129.65 Aligned_cols=210 Identities=25% Similarity=0.313 Sum_probs=145.8
Q ss_pred HHHHhccCCCccceeeeeeeecC-----eEEEEEEeccCCCchhhhcCCCc-cccCCHHHHHHHHHHHHHHHHHHHhcCC
Q 004642 500 AHVLSTVRHRNIVKLYGFCLHKK-----CMFLIYEYMERGSLFCVLHDDDE-AIELNWTKRVNIVKSVAHALSYLHHDCT 573 (740)
Q Consensus 500 ~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~ 573 (740)
+.-+-++.|.|||+++.|+.+.+ ...++.|||+.|++..+|.+... ...+....-.+++.||..||.|||+. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 34455667999999999987643 47889999999999999976543 23466677788999999999999985 7
Q ss_pred CCeEecCCCCCceEEcCCCcEEEeecccceec-cc---CCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHH
Q 004642 574 LSIIHRDISSNNILLDSNLEASVADFGTARLL-HV---DSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVL 649 (740)
Q Consensus 574 ~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~-~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 649 (740)
+.|+|+++.-+-|++..+|-+|++--.-...- .. .........+-++|.+||+-.....+.++|||+||....||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 78999999999999999998887421111000 00 001112234678999999988777888999999999999998
Q ss_pred hCCCC-CCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCCCC
Q 004642 650 MGTHP-GGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGKTP 725 (740)
Q Consensus 650 tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~~~ 725 (740)
-|..- ....+. ...+..+...+.. +... .-+.++.+|++..|..||+|.+++.|....+..
T Consensus 277 ilEiq~tnseS~----~~~ee~ia~~i~~-len~----------lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 277 ILEIQSTNSESK----VEVEENIANVIIG-LENG----------LQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred HheeccCCCcce----eehhhhhhhheee-ccCc----------cccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 87643 111110 0111111111111 1110 023567789999999999999999887665443
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=4.5e-12 Score=135.83 Aligned_cols=249 Identities=24% Similarity=0.248 Sum_probs=178.3
Q ss_pred cccccceeeec--ccceEEEEEEe---CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeecCe
Q 004642 450 EDFHIKYCIGT--GGYGSVYKAEL---PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHKKC 523 (740)
Q Consensus 450 ~~~~~~~~lg~--G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 523 (740)
..|.+...+|. |.+|.||.+.. .++..+|+|+-+........ ..+=.+|+.....+ .|++.++.+..+...+.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~-~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD-SKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccc-cccccchhhcccccCccccccccCcccccCCc
Confidence 45677888999 99999999955 46888999985443332111 12223566666666 59999999999999999
Q ss_pred EEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCceEEcCC-CcEEEee
Q 004642 524 MFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAH----ALSYLHHDCTLSIIHRDISSNNILLDSN-LEASVAD 598 (740)
Q Consensus 524 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~D 598 (740)
.++-.|++. .++.++.+.... .++....+.+..+..+ |+.++|.. .++|-|+||.||+...+ ...+++|
T Consensus 193 lfiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred ceeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCC
Confidence 999999886 577777765443 2566777778888888 99999998 99999999999999999 8899999
Q ss_pred cccceecccCCCccccc-----ccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhh
Q 004642 599 FGTARLLHVDSSYRTLR-----AGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLID 673 (740)
Q Consensus 599 fG~a~~~~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 673 (740)
||+...+....-..... .|...|++||...+ .++...|+|++|.++.+..++..+.-...-..+..
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-------- 337 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-------- 337 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--------
Confidence 99998876544222222 57889999998765 46778999999999999999887643210000000
Q ss_pred hhccc-CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004642 674 VLNQR-LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQE 718 (740)
Q Consensus 674 ~~~~~-l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 718 (740)
+++. ++.+.. ..-..++...+..+++.+|..|++++.+..+
T Consensus 338 -~r~~~ip~e~~---~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 338 -LRQGYIPLEFC---EGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred -cccccCchhhh---cCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 0110 111111 0111224557888999999999999877654
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.28 E-value=2.8e-11 Score=133.37 Aligned_cols=146 Identities=21% Similarity=0.230 Sum_probs=93.5
Q ss_pred cccccceeeecccceEEEEEEeCC-CcEEEEEEccCCcccc---------------------------h----HHHH---
Q 004642 450 EDFHIKYCIGTGGYGSVYKAELPE-GKVVALKKLHHSETED---------------------------S----AFVK--- 494 (740)
Q Consensus 450 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~---------------------------~----~~~~--- 494 (740)
..|+. +.||+|++|.||+|++++ |+.||||+.+...... . +..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45665 789999999999999887 9999999997542110 0 1112
Q ss_pred ---HHHHHHHHHhccC----CCccceeeeeeee-cCeEEEEEEeccCCCchhh--hcCCC-ccccCCHHHHHHHHHHHHH
Q 004642 495 ---SFQNEAHVLSTVR----HRNIVKLYGFCLH-KKCMFLIYEYMERGSLFCV--LHDDD-EAIELNWTKRVNIVKSVAH 563 (740)
Q Consensus 495 ---~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~--l~~~~-~~~~l~~~~~~~i~~~ia~ 563 (740)
.+.+|+..+.+++ +...+.+-..+.+ ....++||||++|+.+.+. +...+ ....+....+..++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 2334444444442 3333333333322 4457899999999999764 22211 11122222233333333
Q ss_pred HHHHHHhcCCCCeEecCCCCCceEEcCCC----cEEEeecccceecc
Q 004642 564 ALSYLHHDCTLSIIHRDISSNNILLDSNL----EASVADFGTARLLH 606 (740)
Q Consensus 564 ~L~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~DfG~a~~~~ 606 (740)
... |++|+|++|.||+++.++ .+++.|||++..+.
T Consensus 277 -----f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 -----FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -----HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 334 999999999999999888 99999999997654
No 466
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.26 E-value=2.2e-11 Score=116.12 Aligned_cols=131 Identities=24% Similarity=0.259 Sum_probs=95.8
Q ss_pred ceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccc-eeeeeeeecCeEEEEEEeccC
Q 004642 455 KYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIV-KLYGFCLHKKCMFLIYEYMER 533 (740)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~ 533 (740)
.+.++.|.++.||+++.. |+.|++|........ ...+.+|+++++.+.+.+++ +++++. ....++||||++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL----LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCccc----ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence 356899999999999864 788999998654321 13456788889888655544 444443 2335799999999
Q ss_pred CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 534 GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDC--TLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 534 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
.++.+. . . .....+.+++++++.||... ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~----~----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTE----D----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Cccccc----c----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 887543 0 0 11235678999999999872 12369999999999999 66899999998853
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.26 E-value=9.9e-11 Score=126.59 Aligned_cols=168 Identities=17% Similarity=0.211 Sum_probs=124.4
Q ss_pred EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccC
Q 004642 470 ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIEL 549 (740)
Q Consensus 470 ~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l 549 (740)
+..++.+|.|...+.... +......+.++-++.+|||||+++++.+...+..|+|+|.+. .|..++.+..
T Consensus 33 ~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----- 102 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----- 102 (690)
T ss_pred eeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----
Confidence 444678888887765543 234556778889999999999999999999999999999875 3444554332
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCcccccccCCCccccccccc
Q 004642 550 NWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSYRTLRAGTYGYIAPELAYT 629 (740)
Q Consensus 550 ~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 629 (740)
...+.-.+.||+.||.|||+.| +++|++|.-.-|+++..|..||++|.++.....-........--..|..|+.+..
T Consensus 103 -~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 103 -KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 3445557899999999999764 8999999999999999999999999988654322211111112234666765443
Q ss_pred cccCCcchhHhHHHHHHHHHhCC
Q 004642 630 IVVTGKCDVYSFGVVALEVLMGT 652 (740)
Q Consensus 630 ~~~~~~~DvwslGvil~elltg~ 652 (740)
..+ ..|.|.|||+++|++.|.
T Consensus 180 s~~--s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 180 SEW--SIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccc--chhhhhHHHHHHHHhCcc
Confidence 332 359999999999999993
No 468
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.24 E-value=1.6e-10 Score=110.58 Aligned_cols=139 Identities=21% Similarity=0.197 Sum_probs=99.3
Q ss_pred eeeecccceEEEEEEeCC-------CcEEEEEEccCCccc----------c---------hHHHH----HHHHHHHHHhc
Q 004642 456 YCIGTGGYGSVYKAELPE-------GKVVALKKLHHSETE----------D---------SAFVK----SFQNEAHVLST 505 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~----------~---------~~~~~----~~~~E~~~l~~ 505 (740)
..||.|--+.||.|...+ +..+|||+.+..... + ....+ ...+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996543 578999988642110 0 01122 33489999999
Q ss_pred cCC--CccceeeeeeeecCeEEEEEEeccCCCchh-hhcCCCccccCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCC
Q 004642 506 VRH--RNIVKLYGFCLHKKCMFLIYEYMERGSLFC-VLHDDDEAIELNWTKRVNIVKSVAHALSYL-HHDCTLSIIHRDI 581 (740)
Q Consensus 506 l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~ivH~dl 581 (740)
+.. -++..++++ ...++||||+.++.+.. .+.+. .++..+...+..+++.+|..| |+. +++|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 853 456666654 45789999998754421 22221 244456677889999999999 777 9999999
Q ss_pred CCCceEEcCCCcEEEeecccceecc
Q 004642 582 SSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 582 kp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
++.||+++ ++.+.|+|||.+....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4679999999997653
No 469
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.24 E-value=5.6e-12 Score=118.08 Aligned_cols=101 Identities=33% Similarity=0.340 Sum_probs=28.8
Q ss_pred CCCCEEecCCCcCCCcCCccccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcC-CcccccCCCCCeEe
Q 004642 216 SALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSI-PTEIGNCSALKNLT 294 (740)
Q Consensus 216 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~l~~l~~L~~L~ 294 (740)
.+|+.|+|++|+|+.+ +.+..++.|+.|++++|+|+...+.....+++|+.|++++|+|.... -..+..+++|+.|+
T Consensus 42 ~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~ 119 (175)
T PF14580_consen 42 DKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLS 119 (175)
T ss_dssp TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE
T ss_pred cCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceee
Confidence 3444444444444432 23444555555555555554322211123455555555555554311 12344555555555
Q ss_pred ccCCCCCCCC---chhcccccccceEE
Q 004642 295 LNHNSLDGTI---PLEMGKILLLQNLD 318 (740)
Q Consensus 295 L~~N~l~~~~---p~~~~~l~~L~~L~ 318 (740)
|.+|.++... ...+..+|+|+.||
T Consensus 120 L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 120 LEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp -TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred ccCCcccchhhHHHHHHHHcChhheeC
Confidence 5555555221 12244455555553
No 470
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.24 E-value=6.8e-12 Score=117.54 Aligned_cols=85 Identities=32% Similarity=0.454 Sum_probs=21.7
Q ss_pred CCCCCccEEeCCCCCcccCCCcccc-CCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhccccccc
Q 004642 98 SCFPNLKSLDLWNNSLSGSIPPQIG-SLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLT 176 (740)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 176 (740)
.+...++.|+|++|.|+.+ +.++ .+.+|+.|+|++|.|+.+ +.+..+++|++|+|++|+|+.+.+.....+++|+
T Consensus 16 ~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQ 91 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--
T ss_pred ccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCC
Confidence 3444567777777777643 2344 466777777777777644 2466667777777777777654332223566777
Q ss_pred eeeccccccc
Q 004642 177 ELYVTNNALG 186 (740)
Q Consensus 177 ~L~L~~N~l~ 186 (740)
+|+|++|+|.
T Consensus 92 ~L~L~~N~I~ 101 (175)
T PF14580_consen 92 ELYLSNNKIS 101 (175)
T ss_dssp EEE-TTS---
T ss_pred EEECcCCcCC
Confidence 7777777665
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=1.1e-12 Score=133.78 Aligned_cols=203 Identities=24% Similarity=0.205 Sum_probs=107.0
Q ss_pred EEeCCCCCcccCCCccc----cCCCCCceeecccccccccCc-hhhcccccccccccccccccCCCh--hhhccccccce
Q 004642 105 SLDLWNNSLSGSIPPQI----GSLSKLKCLYLHGNNLTGIIP-KEIGSLRNLRGLFLYSNKLSGVLP--QEIGNLKSLTE 177 (740)
Q Consensus 105 ~L~L~~n~l~~~~~~~~----~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p--~~l~~l~~L~~ 177 (740)
.+.+++-.+.++.-+.+ .++.+|+.+.|.+..+....- .....|++++.||||+|-|....+ .....|++|+.
T Consensus 97 ~~si~nK~vE~iGfDki~akQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~ 176 (505)
T KOG3207|consen 97 VLSISNKQVEFIGFDKIAAKQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLEN 176 (505)
T ss_pred HhhhcCceeEEecHHHHHHHhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchh
Confidence 34445544543332222 246667777777666552211 355667777777777776664332 23446677777
Q ss_pred eecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCc-CCccccccCCCCeecccCCccCCCc
Q 004642 178 LYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGI-IPDELTKLSQLKNLNLSSNLLSGQI 256 (740)
Q Consensus 178 L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~ 256 (740)
|+|+.|++...... +.+ ..++.|+.|.|+.|.|+.. +-..+..+++|+.|+|..|.....-
T Consensus 177 LNls~Nrl~~~~~s-----------~~~-------~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~ 238 (505)
T KOG3207|consen 177 LNLSSNRLSNFISS-----------NTT-------LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIK 238 (505)
T ss_pred cccccccccCCccc-----------cch-------hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccccccee
Confidence 77777776522110 000 1345566666666666531 1112234566666666666422222
Q ss_pred hhhhcCccCCceeccCCCcccCcC-CcccccCCCCCeEeccCCCCCCC-Cchh-----cccccccceEEecCCccc
Q 004642 257 PYAIGKLFNLMYLDLSKNKLSGSI-PTEIGNCSALKNLTLNHNSLDGT-IPLE-----MGKILLLQNLDLSHNNLS 325 (740)
Q Consensus 257 ~~~~~~l~~L~~L~l~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~-~p~~-----~~~l~~L~~L~l~~N~l~ 325 (740)
......+..|+.|||++|++-... -...+.++.|+.|+++.+.+... .|+. ...+++|++|+++.|++.
T Consensus 239 ~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 239 ATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred cchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 223334455666666666665321 13355666666666666666532 2222 244566666666666664
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.20 E-value=2e-12 Score=128.51 Aligned_cols=111 Identities=23% Similarity=0.263 Sum_probs=46.8
Q ss_pred ccCCCCEEecCCCcCCCc----CCccccccCCCCeecccCCccCCCc----hhhhcCccCCceeccCCCcccCcCCcccc
Q 004642 214 NFSALDTLDLSDNKIHGI----IPDELTKLSQLKNLNLSSNLLSGQI----PYAIGKLFNLMYLDLSKNKLSGSIPTEIG 285 (740)
Q Consensus 214 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~l~ 285 (740)
..+.|+.+.++.|.|... +...+..+++|+.|||.+|.++... ...+..+++|+.|++++|.++......|.
T Consensus 183 ~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~ 262 (382)
T KOG1909|consen 183 SHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFV 262 (382)
T ss_pred hccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHH
Confidence 334455555555544321 1122344455555555555544221 22333444455555555555432222221
Q ss_pred -----cCCCCCeEeccCCCCCC----CCchhcccccccceEEecCCcc
Q 004642 286 -----NCSALKNLTLNHNSLDG----TIPLEMGKILLLQNLDLSHNNL 324 (740)
Q Consensus 286 -----~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l 324 (740)
..++|+.|.|.+|.++. .+...+...+.|..|+|++|.+
T Consensus 263 ~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 263 DALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 23445555555555442 1122233344444455544444
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.19 E-value=3.5e-12 Score=123.65 Aligned_cols=212 Identities=26% Similarity=0.273 Sum_probs=110.1
Q ss_pred CccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccccc-ccccCCC
Q 004642 87 NIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYS-NKLSGVL 165 (740)
Q Consensus 87 ~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~ 165 (740)
||....-+..++-+.+|+.+.+|++.-..+. +....-+.|+++...+..++.. | .+-....+..+.-+. .-.+|..
T Consensus 200 ni~~~~l~f~l~~f~~l~~~~~s~~~~~~i~-~~~~~kptl~t~~v~~s~~~~~-~-~l~pe~~~~D~~~~E~~t~~G~~ 276 (490)
T KOG1259|consen 200 NIIPNRLSFNLNAFRNLKTLKFSALSTENIV-DIELLKPTLQTICVHNTTIQDV-P-SLLPETILADPSGSEPSTSNGSA 276 (490)
T ss_pred cccccccccchHHhhhhheeeeeccchhhee-ceeecCchhheeeeeccccccc-c-cccchhhhcCccCCCCCccCCce
Confidence 3333333344555666667766666544221 1122235566666655444321 1 111111111111111 1112222
Q ss_pred hhhhccccccceeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCee
Q 004642 166 PQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNL 245 (740)
Q Consensus 166 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 245 (740)
-..+.....|++|||++|.|+ .+-++..-.|+++.|++|+|.|..+ +.+..+++|+.|
T Consensus 277 ~~~~dTWq~LtelDLS~N~I~--------------------~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~L 334 (490)
T KOG1259|consen 277 LVSADTWQELTELDLSGNLIT--------------------QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLL 334 (490)
T ss_pred EEecchHhhhhhccccccchh--------------------hhhhhhhhccceeEEeccccceeee--hhhhhcccceEe
Confidence 222333456667777777665 2233444456677777777777633 346667777777
Q ss_pred cccCCccCCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCC-chhcccccccceEEecCCcc
Q 004642 246 NLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTI-PLEMGKILLLQNLDLSHNNL 324 (740)
Q Consensus 246 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l 324 (740)
|||+|.++.. ...-.++.|++.|.|+.|.|... ..+..+-+|..||+++|+|.... -..++++|-|+.|.|-+|++
T Consensus 335 DLS~N~Ls~~-~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 335 DLSGNLLAEC-VGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ecccchhHhh-hhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 7777777633 22333556677777777766521 33555666677777777776321 13466777777777777777
Q ss_pred cC
Q 004642 325 SG 326 (740)
Q Consensus 325 ~~ 326 (740)
.+
T Consensus 412 ~~ 413 (490)
T KOG1259|consen 412 AG 413 (490)
T ss_pred cc
Confidence 63
No 474
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=1.6e-11 Score=131.74 Aligned_cols=252 Identities=18% Similarity=0.167 Sum_probs=176.8
Q ss_pred HHHHhcccccceeeecccceEEEEEEe--CCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeeeeeec
Q 004642 445 LINATEDFHIKYCIGTGGYGSVYKAEL--PEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGFCLHK 521 (740)
Q Consensus 445 l~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 521 (740)
......+|..+..||.|.|+.|++... .++..|++|............+. -..|+.+...+ .|.+++.++..+...
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCCCCCcccc
Confidence 344567889999999999999999843 46788999988776555433222 23456565555 588899888888887
Q ss_pred CeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CcEEEeecc
Q 004642 522 KCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSN-LEASVADFG 600 (740)
Q Consensus 522 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~DfG 600 (740)
...|+--||+++++....+ .....++...++++..|++.++.++|+. .++|+|+||+||++..+ +.-+++|||
T Consensus 339 r~~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred ccccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccc
Confidence 7788999999999887555 2223567788899999999999999988 99999999999999986 778999999
Q ss_pred cceecccCCCcccccccCCCcc--ccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhccc
Q 004642 601 TARLLHVDSSYRTLRAGTYGYI--APELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQR 678 (740)
Q Consensus 601 ~a~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.+..+.. .. ....+..+++ +|+......+..+.|++|||.-+.|..+|..--.- ......+..-....
T Consensus 413 ~~t~~~~--~~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-------~~~~~~i~~~~~p~ 482 (524)
T KOG0601|consen 413 CWTRLAF--SS-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-------GVQSLTIRSGDTPN 482 (524)
T ss_pred cccccce--ec-ccccccccccccchhhccccccccccccccccccccccccCcccCcc-------cccceeeecccccC
Confidence 9875321 11 1112333444 55556677788899999999999999998753111 00000011100111
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHc
Q 004642 679 LSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLA 721 (740)
Q Consensus 679 l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 721 (740)
.+. ....+..+.+.+...++..||.+.++..+...
T Consensus 483 ~~~--------~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 483 LPG--------LKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred CCc--------hHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 111 11225567778899999999999988766544
No 475
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=3.9e-10 Score=103.67 Aligned_cols=133 Identities=20% Similarity=0.335 Sum_probs=104.0
Q ss_pred eeecccceEEEEEEeCCCcEEEEEEccCCcccchH-----HHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEec
Q 004642 457 CIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSA-----FVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIYEYM 531 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 531 (740)
.+++|+-+.+|.+.+. |..+++|.-.......++ ...+-.+|+.++.+++--.|...+-+..+++...++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4789999999999774 444666655443333322 2345678999999987667766677777888889999999
Q ss_pred cCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccccee
Q 004642 532 ERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARL 604 (740)
Q Consensus 532 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~ 604 (740)
+|..|.+.+... ...++..+=.-+.-||.. ||+|+|+.++||++..+. +.++|||++.+
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999888888654 234677778888899999 999999999999998775 99999999975
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=7.2e-12 Score=127.85 Aligned_cols=211 Identities=24% Similarity=0.240 Sum_probs=143.6
Q ss_pred CCCCCccEEeCCCCCcccCCC-ccccCCCCCceeeccccccccc--CchhhcccccccccccccccccCCChhh-hcccc
Q 004642 98 SCFPNLKSLDLWNNSLSGSIP-PQIGSLSKLKCLYLHGNNLTGI--IPKEIGSLRNLRGLFLYSNKLSGVLPQE-IGNLK 173 (740)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~~-l~~l~ 173 (740)
+++..|+...|.+..+..... .....|++++.||||+|-|... +-.....|++|+.|+|+.|++....... -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 457778888888887762221 3566788888888888877633 3345567888888999988886333222 22567
Q ss_pred ccceeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCccC
Q 004642 174 SLTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLS 253 (740)
Q Consensus 174 ~L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 253 (740)
.|+.|.|+.|.|+.. .+...+..+|+|+.|+|..|..-.+-......+..|+.|+|++|++.
T Consensus 198 ~lK~L~l~~CGls~k------------------~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWK------------------DVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred hhheEEeccCCCCHH------------------HHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 888888888887622 11123345788888888888533344444556778888889888876
Q ss_pred CCc-hhhhcCccCCceeccCCCcccCc-CCcc-----cccCCCCCeEeccCCCCCCC-CchhcccccccceEEecCCccc
Q 004642 254 GQI-PYAIGKLFNLMYLDLSKNKLSGS-IPTE-----IGNCSALKNLTLNHNSLDGT-IPLEMGKILLLQNLDLSHNNLS 325 (740)
Q Consensus 254 ~~~-~~~~~~l~~L~~L~l~~N~l~~~-~~~~-----l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~ 325 (740)
... -...+.++.|+.|+++.|.++.. +|+. ...+++|++|+++.|++..- .-..+-.+++|+.|.+..|.|+
T Consensus 260 ~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 260 DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 432 13566788888888888888753 2222 34678899999999998621 1234556677888888888887
Q ss_pred C
Q 004642 326 G 326 (740)
Q Consensus 326 ~ 326 (740)
.
T Consensus 340 ~ 340 (505)
T KOG3207|consen 340 K 340 (505)
T ss_pred c
Confidence 4
No 477
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=1e-09 Score=109.52 Aligned_cols=143 Identities=20% Similarity=0.236 Sum_probs=110.4
Q ss_pred eeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCC--ccceeeeeeeec---CeEEEEEEe
Q 004642 456 YCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHR--NIVKLYGFCLHK---KCMFLIYEY 530 (740)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~ 530 (740)
+.|+.|..+.||++...+|+.+++|........ .....+..|.++++.+++. .+.+++.+.... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999998777789999998664432 1235678899999999753 456677777654 367899999
Q ss_pred ccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 004642 531 MERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDC-------------------------------------- 572 (740)
Q Consensus 531 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 572 (740)
++|.++.+.+.. ..++..+...++.+++++|.+||+..
T Consensus 82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 999988765532 13667778888889999998888531
Q ss_pred ---------------CCCeEecCCCCCceEEcC--CCcEEEeeccccee
Q 004642 573 ---------------TLSIIHRDISSNNILLDS--NLEASVADFGTARL 604 (740)
Q Consensus 573 ---------------~~~ivH~dlkp~NIll~~--~~~~kl~DfG~a~~ 604 (740)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998854
No 478
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.09 E-value=1.2e-11 Score=135.32 Aligned_cols=197 Identities=29% Similarity=0.389 Sum_probs=126.4
Q ss_pred CCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhcccccccee
Q 004642 99 CFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTEL 178 (740)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 178 (740)
.+..++.++++.|.+.. +-..+..+++|+.|++.+|+|..+ ...+..+++|++|+|++|.|+.+ ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 45666677777777763 334467777888888888887744 22266777888888888888766 456667778888
Q ss_pred ecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCC-ccccccCCCCeecccCCccCCCch
Q 004642 179 YVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIP-DELTKLSQLKNLNLSSNLLSGQIP 257 (740)
Q Consensus 179 ~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~ 257 (740)
++++|.|+.. ..+..+++|+.+++++|++..+-+ . ...+.+|+.+++.+|.+....
T Consensus 146 ~l~~N~i~~~---------------------~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~- 202 (414)
T KOG0531|consen 146 NLSGNLISDI---------------------SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE- 202 (414)
T ss_pred eeccCcchhc---------------------cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc-
Confidence 8888877632 233346677777777777775433 1 466677777777777775332
Q ss_pred hhhcCccCCceeccCCCcccCcCCcccccCCC--CCeEeccCCCCCCCCchhcccccccceEEecCCcccC
Q 004642 258 YAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSA--LKNLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLSG 326 (740)
Q Consensus 258 ~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 326 (740)
.+..+..+..+++..|.++..- .+..+.. |+.+++++|++. .++..+..+..+..|++.+|++..
T Consensus 203 -~~~~~~~l~~~~l~~n~i~~~~--~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~ 269 (414)
T KOG0531|consen 203 -GLDLLKKLVLLSLLDNKISKLE--GLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISN 269 (414)
T ss_pred -chHHHHHHHHhhcccccceecc--CcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccc
Confidence 2333444555577777776321 1222233 677777777777 444556666777777777777764
No 479
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08 E-value=1.1e-09 Score=100.09 Aligned_cols=146 Identities=18% Similarity=0.253 Sum_probs=107.0
Q ss_pred cceeeecccceEEEEEEeCCCcEEEEEEccCCcc-----cchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEE
Q 004642 454 IKYCIGTGGYGSVYKAELPEGKVVALKKLHHSET-----EDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFLIY 528 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (740)
....+.||+-+.|+++.+ .|+...||.-..... ...-..++..+|++.+.+++--.|....-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 457799999999999988 577777765433322 22233467788999999987555555555666777778999
Q ss_pred EeccC-CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc---EEEeeccccee
Q 004642 529 EYMER-GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE---ASVADFGTARL 604 (740)
Q Consensus 529 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~DfG~a~~ 604 (740)
||++| .++.+++.........+ ......+.+|-..+.-||.. +|+|+||..+||++..++. +.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 46677765543322222 22367888999999999999 9999999999999976553 57999999854
No 480
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.08 E-value=5.7e-09 Score=106.64 Aligned_cols=257 Identities=16% Similarity=0.222 Sum_probs=155.7
Q ss_pred cceeeecccceEEEEEEeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhcc-CCCccceeeee----ee---ecCeEE
Q 004642 454 IKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTV-RHRNIVKLYGF----CL---HKKCMF 525 (740)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~----~~---~~~~~~ 525 (740)
..+.||+|+.+.+|-.- +-..-+.|+++.....-. .+.+..|... .||-+-.-+.+ -. .+....
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQ------AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHH------HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 45679999999999752 112234477765543311 1223334444 56543221111 10 122356
Q ss_pred EEEEeccCCCc-hhhh---cCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeeccc
Q 004642 526 LIYEYMERGSL-FCVL---HDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGT 601 (740)
Q Consensus 526 lv~e~~~~g~L-~~~l---~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~ 601 (740)
++|..+++..- ..+. ++...-...+|...++.++.+|.+.+.||.. |.+-+|+.++|+|+++++.+.+.|-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 77777766421 1111 1122234578999999999999999999999 999999999999999999999987554
Q ss_pred ceecccCCCcccccccCCCcccccccc-----ccccCCcchhHhHHHHHHHHHhC-CCCCCcccccccCCCCCc-hhh--
Q 004642 602 ARLLHVDSSYRTLRAGTYGYIAPELAY-----TIVVTGKCDVYSFGVVALEVLMG-THPGGLLSSLSSSSGPKI-MLI-- 672 (740)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg-~~p~~~~~~~~~~~~~~~-~~~-- 672 (740)
-..- .+.......+|...|.+||.-. +..-+...|-|.+||++++++.| ++||.............+ .+.
T Consensus 164 fqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 164 FQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 3322 2222233347899999999643 44556679999999999999997 999986543322222111 111
Q ss_pred ---hhhccc--C-CCcchhhhHHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHHHcC
Q 004642 673 ---DVLNQR--L-SPPVNQKIVQDIILVSTIAFACLSSQ--PKSRPTMQRISQELLAG 722 (740)
Q Consensus 673 ---~~~~~~--l-~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~ev~~~L~~~ 722 (740)
..-+++ . +++....+.---..+..+..+|+... |.-||+++..+..|...
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 111111 1 11111111111122556667787643 56899999999888654
No 481
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.08 E-value=1.3e-11 Score=119.76 Aligned_cols=177 Identities=24% Similarity=0.322 Sum_probs=120.6
Q ss_pred CCccEEeCCCCCcccCCCccccCCCCCceeecccc-cccccCchhhcccccccccccccccccCCChhhhccccccceee
Q 004642 101 PNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGN-NLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTELY 179 (740)
Q Consensus 101 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 179 (740)
|-|+++...+..++.. +.+-..+.+..+.-+.- ..+|..-......+.|++||||+|.|+ .+..+..-+|.++.|+
T Consensus 237 ptl~t~~v~~s~~~~~--~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~ 313 (490)
T KOG1259|consen 237 PTLQTICVHNTTIQDV--PSLLPETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLI 313 (490)
T ss_pred chhheeeeeccccccc--ccccchhhhcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEe
Confidence 5566776666555421 11222222322222211 122332233334467899999999988 4556777788999999
Q ss_pred cccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCccCCCchhh
Q 004642 180 VTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLLSGQIPYA 259 (740)
Q Consensus 180 L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 259 (740)
+++|.|..+ ..+..+++|+.||||+|.++. +.++-.++-+++.|.|+.|.|... ..
T Consensus 314 lS~N~i~~v---------------------~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~La~N~iE~L--SG 369 (490)
T KOG1259|consen 314 LSQNRIRTV---------------------QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKLAQNKIETL--SG 369 (490)
T ss_pred ccccceeee---------------------hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeeehhhhhHhhh--hh
Confidence 999988733 235567889999999999884 445556788899999999998643 45
Q ss_pred hcCccCCceeccCCCcccCc-CCcccccCCCCCeEeccCCCCCCCC
Q 004642 260 IGKLFNLMYLDLSKNKLSGS-IPTEIGNCSALKNLTLNHNSLDGTI 304 (740)
Q Consensus 260 ~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~ 304 (740)
++++-+|.+||+++|+|... --..+++++.|+++.|.+|.+.+..
T Consensus 370 L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 370 LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 67778899999999998742 2245889999999999999999543
No 482
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.07 E-value=1.5e-11 Score=122.28 Aligned_cols=222 Identities=21% Similarity=0.263 Sum_probs=160.0
Q ss_pred cCCCCCccEEeCCCCCccc----CCCccccCCCCCceeecccc---cccccCchh-------hccccccccccccccccc
Q 004642 97 FSCFPNLKSLDLWNNSLSG----SIPPQIGSLSKLKCLYLHGN---NLTGIIPKE-------IGSLRNLRGLFLYSNKLS 162 (740)
Q Consensus 97 ~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N---~l~~~~p~~-------l~~l~~L~~L~L~~N~l~ 162 (740)
...+..++.|+||+|.+.. .+.+.+.+.++|+..++|+- ++...+|+. +..+++|++||||.|-|.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 4456778889999998862 34566778889999998873 334455543 345679999999999987
Q ss_pred CCChhhh----ccccccceeecccccccccCCCcccc-cccCCCccccCCCCccccccCCCCEEecCCCcCCCcC----C
Q 004642 163 GVLPQEI----GNLKSLTELYVTNNALGGLIPSTLFR-LTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGII----P 233 (740)
Q Consensus 163 ~~~p~~l----~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~----~ 233 (740)
...+..| ..+..|++|+|.||.+.-..-..+++ +..+..| .....-++|+++...+|++.... .
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~-------kk~~~~~~Lrv~i~~rNrlen~ga~~~A 178 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVN-------KKAASKPKLRVFICGRNRLENGGATALA 178 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHH-------hccCCCcceEEEEeeccccccccHHHHH
Confidence 6666554 46788999999999886332222222 1112211 12344568999999999998532 2
Q ss_pred ccccccCCCCeecccCCccCCC----chhhhcCccCCceeccCCCcccCc----CCcccccCCCCCeEeccCCCCCCCCc
Q 004642 234 DELTKLSQLKNLNLSSNLLSGQ----IPYAIGKLFNLMYLDLSKNKLSGS----IPTEIGNCSALKNLTLNHNSLDGTIP 305 (740)
Q Consensus 234 ~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~p 305 (740)
..|...+.|+.+.++.|.|... +...|..+++|+.|||.+|-++.. +...+..++.|+.|++++|.+...-.
T Consensus 179 ~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga 258 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGA 258 (382)
T ss_pred HHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccH
Confidence 3466778999999999998532 345678899999999999999843 34556788999999999999986544
Q ss_pred hhc-----ccccccceEEecCCccc
Q 004642 306 LEM-----GKILLLQNLDLSHNNLS 325 (740)
Q Consensus 306 ~~~-----~~l~~L~~L~l~~N~l~ 325 (740)
..+ ...++|+.|.+.+|.++
T Consensus 259 ~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 259 IAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HHHHHHHhccCCCCceeccCcchhH
Confidence 333 33688999999999997
No 483
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.03 E-value=5.3e-11 Score=130.18 Aligned_cols=215 Identities=28% Similarity=0.354 Sum_probs=140.2
Q ss_pred EEEEEcCCCCccccccCcccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccc
Q 004642 78 ITDIDLLNSNIKGELGRLNFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLY 157 (740)
Q Consensus 78 v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 157 (740)
+..+++..+.+.... ..+..+.+|+.|+|.+|+|..+. ..+..+++|++|+|++|.|+.+ ..+..++.|+.|+++
T Consensus 74 l~~l~l~~n~i~~~~--~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 74 LKELNLRQNLIAKIL--NHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLS 148 (414)
T ss_pred HHhhccchhhhhhhh--cccccccceeeeeccccchhhcc-cchhhhhcchheeccccccccc--cchhhccchhhheec
Confidence 333445555444311 13677899999999999998543 3378899999999999999866 357778889999999
Q ss_pred cccccCCChhhhccccccceeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCcccc
Q 004642 158 SNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELT 237 (740)
Q Consensus 158 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 237 (740)
+|.|+.+ ..+..+++|+.+++++|+++...+. . ...+.+|+.+++.+|.+..+ ..+.
T Consensus 149 ~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~------------------~-~~~~~~l~~l~l~~n~i~~i--~~~~ 205 (414)
T KOG0531|consen 149 GNLISDI--SGLESLKSLKLLDLSYNRIVDIEND------------------E-LSELISLEELDLGGNSIREI--EGLD 205 (414)
T ss_pred cCcchhc--cCCccchhhhcccCCcchhhhhhhh------------------h-hhhccchHHHhccCCchhcc--cchH
Confidence 9999865 5677789999999999998855331 1 34556677777777776632 3344
Q ss_pred ccCCCCeecccCCccCCCchhhhcCccC--CceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCCchhcccccccc
Q 004642 238 KLSQLKNLNLSSNLLSGQIPYAIGKLFN--LMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTIPLEMGKILLLQ 315 (740)
Q Consensus 238 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 315 (740)
.+..+..+++..|.++..-+ +..+.. |+.+++++|++. .++..+..+.++..|++.+|++...- .+.....+.
T Consensus 206 ~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~ 280 (414)
T KOG0531|consen 206 LLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLS 280 (414)
T ss_pred HHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccccchHH
Confidence 45555555666676653322 112222 667777777766 33345566666777777777666322 233444555
Q ss_pred eEEecCCccc
Q 004642 316 NLDLSHNNLS 325 (740)
Q Consensus 316 ~L~l~~N~l~ 325 (740)
.+.++.|.+.
T Consensus 281 ~~~~~~~~~~ 290 (414)
T KOG0531|consen 281 ELWLNDNKLA 290 (414)
T ss_pred HhccCcchhc
Confidence 5666666654
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.96 E-value=1.3e-10 Score=130.83 Aligned_cols=251 Identities=20% Similarity=0.253 Sum_probs=166.0
Q ss_pred HhcccccceeeecccceEEEEEEeC-CCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeeecCeEEE
Q 004642 448 ATEDFHIKYCIGTGGYGSVYKAELP-EGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLHKKCMFL 526 (740)
Q Consensus 448 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (740)
..+.+.+.+-+-.|.++.++.+.-. .|...+.|.......-.....+....+-.+.-..++|.++...-.+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4567777888899999999877322 233333333322111100011222333333333456666665555455667899
Q ss_pred EEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecc
Q 004642 527 IYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLH 606 (740)
Q Consensus 527 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~ 606 (740)
+++|..+++|...+|..+ ..+..........+..+.+|||.. .+.|+|++|.|.+...++..+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccc
Confidence 999999999999998765 233344445566788899999986 68999999999999999999999998432211
Q ss_pred cC-----C--------------------------CcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCC
Q 004642 607 VD-----S--------------------------SYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPG 655 (740)
Q Consensus 607 ~~-----~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~ 655 (740)
.- . .......||+.|.+||...+......+|.|+.|++++|.++|..||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 0 0112235899999999999999999999999999999999999998
Q ss_pred CcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCCCCCCHH
Q 004642 656 GLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 713 (740)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 713 (740)
..... ...+..++....+.+. ...+......+++...+..+|.+|-.|.
T Consensus 1036 na~tp-------q~~f~ni~~~~~~~p~--g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETP-------QQIFENILNRDIPWPE--GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcch-------hhhhhccccCCCCCCC--CccccChhhhhhhhhhhccCchhccCcc
Confidence 76432 2222333333222111 1122233367788888999999997665
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.95 E-value=8.4e-09 Score=98.46 Aligned_cols=129 Identities=25% Similarity=0.320 Sum_probs=84.3
Q ss_pred EEEEEEeCCCcEEEEEEccCCcc-----------------------cchHHHHHHHHHHHHHhccCCC--ccceeeeeee
Q 004642 465 SVYKAELPEGKVVALKKLHHSET-----------------------EDSAFVKSFQNEAHVLSTVRHR--NIVKLYGFCL 519 (740)
Q Consensus 465 ~Vy~~~~~~g~~vavK~~~~~~~-----------------------~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 519 (740)
.||.|...+|..+|+|..+.... .......+..+|.+.|.++... ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999888999999998864210 1112234678899999999765 456665442
Q ss_pred ecCeEEEEEEecc--CCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHH-HHhcCCCCeEecCCCCCceEEcCCCcEEE
Q 004642 520 HKKCMFLIYEYME--RGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSY-LHHDCTLSIIHRDISSNNILLDSNLEASV 596 (740)
Q Consensus 520 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~~~~~~ivH~dlkp~NIll~~~~~~kl 596 (740)
..++||||++ |..+..+.... ++......++.+++..+.. +|.. |++|+|+.+.||+++++ .+.|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 3579999998 54554333221 1123445677788885555 4677 99999999999999988 8999
Q ss_pred eecccceecc
Q 004642 597 ADFGTARLLH 606 (740)
Q Consensus 597 ~DfG~a~~~~ 606 (740)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999997643
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=7.7e-10 Score=85.23 Aligned_cols=59 Identities=46% Similarity=0.556 Sum_probs=28.4
Q ss_pred CccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhccccccccccccccc
Q 004642 102 NLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNK 160 (740)
Q Consensus 102 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 160 (740)
+|++|+|++|+|+.+.+..|..+++|++|+|++|+|+...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44445555555544444444444455555555444444444444444444444444444
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=8.7e-10 Score=84.93 Aligned_cols=61 Identities=38% Similarity=0.510 Sum_probs=56.7
Q ss_pred CCCceeecccccccccCchhhcccccccccccccccccCCChhhhccccccceeecccccc
Q 004642 125 SKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTELYVTNNAL 185 (740)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 185 (740)
++|++|+|++|+|+.+.+..|.++++|++|+|++|+|+.+.|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999988888999999999999999999988889999999999999999986
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.82 E-value=5.6e-08 Score=98.62 Aligned_cols=143 Identities=21% Similarity=0.145 Sum_probs=99.9
Q ss_pred eeecccceEEEEEEeCCCcEEEEEEccCCcccc--h------HHHHHHHHHHHHHhccCCCc--cceeeeeeee-----c
Q 004642 457 CIGTGGYGSVYKAELPEGKVVALKKLHHSETED--S------AFVKSFQNEAHVLSTVRHRN--IVKLYGFCLH-----K 521 (740)
Q Consensus 457 ~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--~------~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~-----~ 521 (740)
.+-......|+++.+ +|+.|.||+........ . .....+.+|...+.++...+ .++++++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 344444455777766 67889999775433210 0 00124778898888884333 3344555543 2
Q ss_pred CeEEEEEEeccCC-CchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-------CCc
Q 004642 522 KCMFLIYEYMERG-SLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS-------NLE 593 (740)
Q Consensus 522 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~-------~~~ 593 (740)
...++|+|++++- +|.+++..... .+.+...+..++.+++..+..||+. ||+|+|++++|||++. +..
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 3578999999986 78888753211 1345567778999999999999999 9999999999999975 467
Q ss_pred EEEeeccccee
Q 004642 594 ASVADFGTARL 604 (740)
Q Consensus 594 ~kl~DfG~a~~ 604 (740)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 89999998854
No 489
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.81 E-value=1.1e-07 Score=100.00 Aligned_cols=221 Identities=15% Similarity=0.218 Sum_probs=151.8
Q ss_pred cceEEEEE-EeCCCcEEEEEEccCCcccchHHHHHHHHHHHHHhccCCCccceeeeeeee----cCeEEEEEEeccC-CC
Q 004642 462 GYGSVYKA-ELPEGKVVALKKLHHSETEDSAFVKSFQNEAHVLSTVRHRNIVKLYGFCLH----KKCMFLIYEYMER-GS 535 (740)
Q Consensus 462 ~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-g~ 535 (740)
...+.|++ ...+|..|++|+++....... ..-..-+++++++.|+|+|++.+++.. +...++||+|.++ ++
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 34578888 455899999999954433221 122345788999999999999988873 4578999999986 35
Q ss_pred chhhhcCCC------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccce
Q 004642 536 LFCVLHDDD------------EAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTAR 603 (740)
Q Consensus 536 L~~~l~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~ 603 (740)
|.++-.... .....++..+|.++.|+..||.++|+. |+.-+-|.|++|+++.+.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEeccccee
Confidence 655433211 123467889999999999999999999 99999999999999999999999999887
Q ss_pred ecccCCCcccccccCCCccccccccccccCCcchhHhHHHHHHHHHhCCCCCCcccccccCCCCCchhhhhhcccCCCcc
Q 004642 604 LLHVDSSYRTLRAGTYGYIAPELAYTIVVTGKCDVYSFGVVALEVLMGTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPV 683 (740)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 683 (740)
....++. |-+.+ -.+-|.=.||.+++.|.||..--.. .+......+ ..+..
T Consensus 442 vl~~d~~--------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~---------~d~~~~s~~-~~I~~-- 492 (655)
T KOG3741|consen 442 VLQEDPT--------------EPLES---QQQNDLRDLGLLLLALATGTENSNR---------TDSTQSSHL-TRITT-- 492 (655)
T ss_pred eecCCCC--------------cchhH---HhhhhHHHHHHHHHHHhhccccccc---------ccchHHHHH-HHhhh--
Confidence 7665441 11111 1356899999999999999753110 000000000 00100
Q ss_pred hhhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHcCC
Q 004642 684 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRISQELLAGK 723 (740)
Q Consensus 684 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~~~ 723 (740)
.....+++++.......+++ -+..+++.++....
T Consensus 493 -----~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~~~f 526 (655)
T KOG3741|consen 493 -----TYSTDLRNVVEYLESLNFRE-KSIQDLLPMIGSRF 526 (655)
T ss_pred -----hhhHHHHHHHHHHHhcCccc-ccHHHHHHHHHHHH
Confidence 11222667777777777777 67788877775543
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.80 E-value=5.3e-08 Score=95.20 Aligned_cols=138 Identities=22% Similarity=0.234 Sum_probs=99.3
Q ss_pred cccceeeecccceEEEEEEeCCCcEEEEEEccCCccc-------------------chHHHHHHHHHHHHHhccCCC--c
Q 004642 452 FHIKYCIGTGGYGSVYKAELPEGKVVALKKLHHSETE-------------------DSAFVKSFQNEAHVLSTVRHR--N 510 (740)
Q Consensus 452 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-------------------~~~~~~~~~~E~~~l~~l~h~--n 510 (740)
..+..+||.|--+.||.|..++|.++|||.-+..... -........+|.++|+++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3456789999999999999999999999965432111 011234667899999999655 6
Q ss_pred cceeeeeeeecCeEEEEEEeccCCCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC
Q 004642 511 IVKLYGFCLHKKCMFLIYEYMERGSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDS 590 (740)
Q Consensus 511 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~ 590 (740)
+.+.+++ +...+||||++|-.|...-- +....-.++..|+.-+...-.. ||+|+|+++-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6666554 45789999999976654331 1222333445555555544455 9999999999999999
Q ss_pred CCcEEEeeccccee
Q 004642 591 NLEASVADFGTARL 604 (740)
Q Consensus 591 ~~~~kl~DfG~a~~ 604 (740)
||.+.++||-.+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999988754
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.75 E-value=2.9e-10 Score=122.65 Aligned_cols=125 Identities=29% Similarity=0.312 Sum_probs=54.7
Q ss_pred ccccccccccccCCChhhhccccccceeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCC
Q 004642 151 LRGLFLYSNKLSGVLPQEIGNLKSLTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHG 230 (740)
Q Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 230 (740)
|.+.+.+.|.+. ....++.-++.|+.|+|++|+++.. +.+..+++|++|||++|.+..
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v---------------------~~Lr~l~~LkhLDlsyN~L~~ 223 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV---------------------DNLRRLPKLKHLDLSYNCLRH 223 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh---------------------HHHHhcccccccccccchhcc
Confidence 445555555554 3333444445555555555555422 133444555555555555542
Q ss_pred cCCc-cccccCCCCeecccCCccCCCchhhhcCccCCceeccCCCcccCcCC-cccccCCCCCeEeccCCCCC
Q 004642 231 IIPD-ELTKLSQLKNLNLSSNLLSGQIPYAIGKLFNLMYLDLSKNKLSGSIP-TEIGNCSALKNLTLNHNSLD 301 (740)
Q Consensus 231 ~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 301 (740)
+|. ....+ +|+.|.|++|-++.. ..+.++.+|+.||+++|-|.+.-. ..++.+..|+.|+|.+|.+-
T Consensus 224 -vp~l~~~gc-~L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 224 -VPQLSMVGC-KLQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred -ccccchhhh-hheeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 221 11122 255555555554422 233444555555555555443111 12333344444444444443
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.71 E-value=4e-10 Score=121.61 Aligned_cols=129 Identities=29% Similarity=0.284 Sum_probs=102.9
Q ss_pred cccceeecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCcc
Q 004642 173 KSLTELYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLL 252 (740)
Q Consensus 173 ~~L~~L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 252 (740)
..|...+.+.|.++ .+-.++.-++.|+.|+|++|+++.. +.+..+++|++|||+.|.+
T Consensus 164 n~L~~a~fsyN~L~--------------------~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L 221 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV--------------------LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCL 221 (1096)
T ss_pred hhHhhhhcchhhHH--------------------hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchh
Confidence 35777777888876 3345667788999999999999965 4899999999999999999
Q ss_pred CCCchhhhcCccCCceeccCCCcccCcCCcccccCCCCCeEeccCCCCCCCC-chhcccccccceEEecCCcccC
Q 004642 253 SGQIPYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALKNLTLNHNSLDGTI-PLEMGKILLLQNLDLSHNNLSG 326 (740)
Q Consensus 253 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~ 326 (740)
....-.....+ .|+.|.+++|.++.. ..+.++++|+.||++.|-|.+.- -..+..+..|..|+|.||++.+
T Consensus 222 ~~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 222 RHVPQLSMVGC-KLQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccccccchhhh-hheeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 84322233344 499999999999843 45789999999999999998643 2457788899999999999975
No 493
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.67 E-value=6e-09 Score=113.47 Aligned_cols=154 Identities=20% Similarity=0.245 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCcEEEeecccceecccCCCc---------ccccccCCCcccccccc
Q 004642 558 VKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLEASVADFGTARLLHVDSSY---------RTLRAGTYGYIAPELAY 628 (740)
Q Consensus 558 ~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~---------~~~~~gt~~y~aPE~~~ 628 (740)
+.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+++........+ .........|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 44566999999986 58999999999999999999999999998665432211 01112456899999999
Q ss_pred ccccCCcchhHhHHHHHHHHHh-CCCCCCcccccccCCCCCchhhhhhcccCCCcchhhhHHHHHHHHHHHHHcccCCCC
Q 004642 629 TIVVTGKCDVYSFGVVALEVLM-GTHPGGLLSSLSSSSGPKIMLIDVLNQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 707 (740)
Q Consensus 629 ~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~li~~cl~~dP~ 707 (740)
+...+.++|+||+||++|.+.. |+.-++......... .....+............+ ++.+=+.+++..++.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-----~~~~~~~~~~~~~s~~~p~---el~~~l~k~l~~~~~ 254 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-----FSRNLLNAGAFGYSNNLPS---ELRESLKKLLNGDSA 254 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhh-----hhhcccccccccccccCcH---HHHHHHHHHhcCCcc
Confidence 9888899999999999999994 544443322111000 0000000000001111122 266777889999999
Q ss_pred CCCCHHHHHHHHHc
Q 004642 708 SRPTMQRISQELLA 721 (740)
Q Consensus 708 ~RPs~~ev~~~L~~ 721 (740)
.||++.++......
T Consensus 255 ~rp~~~~l~~~~ff 268 (700)
T KOG2137|consen 255 VRPTLDLLLSIPFF 268 (700)
T ss_pred cCcchhhhhccccc
Confidence 99988777655443
No 494
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.62 E-value=1.7e-08 Score=117.94 Aligned_cols=85 Identities=31% Similarity=0.421 Sum_probs=45.6
Q ss_pred ccCCCCCccEEeCCCCCcccCCCccccCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhcccccc
Q 004642 96 NFSCFPNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSL 175 (740)
Q Consensus 96 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 175 (740)
.|..+|.|+.|||++|.=-+.+|..++.|-+|++|+|++..++ .+|..+.+|..|.+|++..+.-...+|..+..|++|
T Consensus 566 ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~L 644 (889)
T KOG4658|consen 566 FFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSL 644 (889)
T ss_pred HHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccc
Confidence 3555555555555554444455555555555555555555555 445555555555555555555444444444445555
Q ss_pred ceeecc
Q 004642 176 TELYVT 181 (740)
Q Consensus 176 ~~L~L~ 181 (740)
++|.+.
T Consensus 645 r~L~l~ 650 (889)
T KOG4658|consen 645 RVLRLP 650 (889)
T ss_pred cEEEee
Confidence 555553
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.58 E-value=5.6e-09 Score=90.28 Aligned_cols=81 Identities=25% Similarity=0.249 Sum_probs=35.6
Q ss_pred ccEEeCCCCCcccCCCcc---ccCCCCCceeecccccccccCchhhcccccccccccccccccCCChhhhccccccceee
Q 004642 103 LKSLDLWNNSLSGSIPPQ---IGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTELY 179 (740)
Q Consensus 103 L~~L~L~~n~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 179 (740)
+..++|+++.+- -+++. +....+|+..+|++|.+....+..-...+.+++|+|++|+|+ .+|..++.++.|+.|+
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 444555555553 12222 223334444455555555322222223344555555555554 2344444444444444
Q ss_pred cccccc
Q 004642 180 VTNNAL 185 (740)
Q Consensus 180 L~~N~l 185 (740)
+++|.+
T Consensus 107 l~~N~l 112 (177)
T KOG4579|consen 107 LRFNPL 112 (177)
T ss_pred cccCcc
Confidence 444444
No 496
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.56 E-value=6.7e-09 Score=101.24 Aligned_cols=86 Identities=33% Similarity=0.374 Sum_probs=40.7
Q ss_pred CCCccEEeCCCCCccc--CCCccccCCCCCceeecccccccccCchhhcccccccccccccccccCCC-hhhhccccccc
Q 004642 100 FPNLKSLDLWNNSLSG--SIPPQIGSLSKLKCLYLHGNNLTGIIPKEIGSLRNLRGLFLYSNKLSGVL-PQEIGNLKSLT 176 (740)
Q Consensus 100 l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~ 176 (740)
.+.++.|||.+|.|+. .+-..+.+++.|++|+|+.|.+...|-..-..+.+|++|-|.+..+.-.- ...+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3445555555555551 22233445555555555555555333222123445555555555544221 12334455555
Q ss_pred eeecccccc
Q 004642 177 ELYVTNNAL 185 (740)
Q Consensus 177 ~L~L~~N~l 185 (740)
+|.++.|.+
T Consensus 150 elHmS~N~~ 158 (418)
T KOG2982|consen 150 ELHMSDNSL 158 (418)
T ss_pred hhhhccchh
Confidence 555555543
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.51 E-value=1.7e-06 Score=83.02 Aligned_cols=141 Identities=18% Similarity=0.138 Sum_probs=101.4
Q ss_pred eecccceEEEEEEeCCCcEEEEEEccCCcccc---hHHHHHHHHHHHHHhccCCC--ccceeeeeee-e----cCeEEEE
Q 004642 458 IGTGGYGSVYKAELPEGKVVALKKLHHSETED---SAFVKSFQNEAHVLSTVRHR--NIVKLYGFCL-H----KKCMFLI 527 (740)
Q Consensus 458 lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~-~----~~~~~lv 527 (740)
-|.||.+.|++... +|+.+-+|+-....... +-....|.+|+..+.++... .+.++. ++. . ....+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 36688899999877 45568888764211111 12346889999999998532 244444 332 1 1246899
Q ss_pred EEeccC-CCchhhhcCCCccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc--EEEeeccccee
Q 004642 528 YEYMER-GSLFCVLHDDDEAIELNWTKRVNIVKSVAHALSYLHHDCTLSIIHRDISSNNILLDSNLE--ASVADFGTARL 604 (740)
Q Consensus 528 ~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~DfG~a~~ 604 (740)
+|-+++ -+|.+++.+... .+.+...+..++.+++..+.-||+. |+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 478888755332 2467777889999999999999999 9999999999999986667 99999987754
No 498
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.49 E-value=9.1e-08 Score=112.03 Aligned_cols=200 Identities=25% Similarity=0.313 Sum_probs=98.7
Q ss_pred CCccEEeCCCCCcccCCCccccCCCCCceeeccccc--ccccCchhhcccccccccccccccccCCChhhhcccccccee
Q 004642 101 PNLKSLDLWNNSLSGSIPPQIGSLSKLKCLYLHGNN--LTGIIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTEL 178 (740)
Q Consensus 101 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~--l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 178 (740)
...+...+-+|.+. .++... ..++|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..+++|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 34455555555554 222222 22356666666654 443444445556666666666655555566666666666666
Q ss_pred ecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCcCCccccccCCCCeecccCCcc--CCCc
Q 004642 179 YVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGIIPDELTKLSQLKNLNLSSNLL--SGQI 256 (740)
Q Consensus 179 ~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l--~~~~ 256 (740)
+|++..+. .+|..++++..|.+|++..+.-...+|.....|++|++|.+..-.. +...
T Consensus 601 ~L~~t~I~--------------------~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~ 660 (889)
T KOG4658|consen 601 DLSDTGIS--------------------HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLL 660 (889)
T ss_pred cccCCCcc--------------------ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhh
Confidence 66666554 4455556666666666665554444455555566666666554432 1222
Q ss_pred hhhhcCccCCceeccCCCcccCcCCcccccCCCCC----eEeccCCCCCCCCchhcccccccceEEecCCccc
Q 004642 257 PYAIGKLFNLMYLDLSKNKLSGSIPTEIGNCSALK----NLTLNHNSLDGTIPLEMGKILLLQNLDLSHNNLS 325 (740)
Q Consensus 257 ~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 325 (740)
-..+.++.+|+.+....... .+-..+..+.+|. .+.+.++... ..+..+..+.+|+.|.+.+....
T Consensus 661 l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 661 LKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred HHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCc
Confidence 22333444444444322222 1112222233322 2222222222 44455666666777766666654
No 499
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.48 E-value=9.4e-07 Score=86.74 Aligned_cols=106 Identities=21% Similarity=0.301 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhccCCC--ccceeeeeeeec----CeEEEEEEeccCC-CchhhhcCCCccccCCHHHHHHHHHHHHHHHH
Q 004642 494 KSFQNEAHVLSTVRHR--NIVKLYGFCLHK----KCMFLIYEYMERG-SLFCVLHDDDEAIELNWTKRVNIVKSVAHALS 566 (740)
Q Consensus 494 ~~~~~E~~~l~~l~h~--niv~l~~~~~~~----~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~ 566 (740)
..+.+|...+.++... .+.+.+++.... ...++|+|++++. +|.+++..... .+......++.+++..++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHH
Confidence 4567788887777432 355566666542 2458999999984 78888875332 455667889999999999
Q ss_pred HHHhcCCCCeEecCCCCCceEEcCCC---cEEEeecccceec
Q 004642 567 YLHHDCTLSIIHRDISSNNILLDSNL---EASVADFGTARLL 605 (740)
Q Consensus 567 ~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~DfG~a~~~ 605 (740)
-||+. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999 999999999999999887 8999999988754
No 500
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.47 E-value=2.7e-08 Score=97.06 Aligned_cols=207 Identities=21% Similarity=0.158 Sum_probs=132.0
Q ss_pred CccEEeCCCCCcccCCC-cccc-CCCCCceeecccccccc--cCchhhcccccccccccccccccCCChhhhccccccce
Q 004642 102 NLKSLDLWNNSLSGSIP-PQIG-SLSKLKCLYLHGNNLTG--IIPKEIGSLRNLRGLFLYSNKLSGVLPQEIGNLKSLTE 177 (740)
Q Consensus 102 ~L~~L~L~~n~l~~~~~-~~~~-~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 177 (740)
.++.|.|.++.|..+.. ..|+ ..+.++.|||.+|.|+. .+-..+.++|.|++|+|+.|.+...+...-..+.+|+.
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 34456666666653321 2233 45789999999999983 34456678999999999999998655433356678999
Q ss_pred eecccccccccCCCcccccccCCCccccCCCCccccccCCCCEEecCCCcCCCc--CCccccccC-CCCeecccCCccCC
Q 004642 178 LYVTNNALGGLIPSTLFRLTNISSNQFHSSIPLEIGNFSALDTLDLSDNKIHGI--IPDELTKLS-QLKNLNLSSNLLSG 254 (740)
Q Consensus 178 L~L~~N~l~~~~~~~~~~l~~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~l~-~L~~L~l~~N~l~~ 254 (740)
|-|.+..+.-. .....+.++|.++.|+||.|.+.-. ......... .+++|.+..|...-
T Consensus 126 lVLNgT~L~w~------------------~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~ 187 (418)
T KOG2982|consen 126 LVLNGTGLSWT------------------QSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQL 187 (418)
T ss_pred EEEcCCCCChh------------------hhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHH
Confidence 99988777532 1223456778888899988844321 111222221 34444444443211
Q ss_pred C--chhhhcCccCCceeccCCCcccCc-CCcccccCCCCCeEeccCCCCCCC-CchhcccccccceEEecCCcccC
Q 004642 255 Q--IPYAIGKLFNLMYLDLSKNKLSGS-IPTEIGNCSALKNLTLNHNSLDGT-IPLEMGKILLLQNLDLSHNNLSG 326 (740)
Q Consensus 255 ~--~~~~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~ 326 (740)
. ....-.-++++..+.+..|.+... -...+..++.+.-|+|+.|+|..- --+.+.+++.|..|.+++|+|..
T Consensus 188 w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 188 WLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred HHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 0 011112356788888888887642 223455677777889999998742 23568889999999999999874
Done!